Thermosediminibacter oceani DSM 16646, complete sequence.
type: Entry
definition: Thermosediminibacter oceani DSM 16646, complete sequence.
sequence version: NC_014377.1
sequence date: 2023-05-02
sequence: sequence
division: CON
label: NC_014377.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN00713558
keyword: GSC:MIGS:2.1
keyword: RefSeq
source: Thermosediminibacter oceani DSM 16646
organism: Thermosediminibacter oceani DSM 16646
taxonomy: Bacteria; Bacillota; Clostridia; Thermosediminibacterales; Thermosediminibacteraceae; Thermosediminibacter.
reference: 1
references: 21304740
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP002131.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4083012\nSource DNA and organism available from Hans-Peter Klenk at the\nGerman Collection of Microorganisms and Cell Cultures (DSMZ)\n(hans-peter.klenk@dsmz.de)\nContacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)\n David Bruce (microbe@cuba.jgi-psf.org)\nWhole genome sequencing and draft assembly at JGI-PGF\nFinishing done by JGI-LANL\nAnnotation by JGI-ORNL and JGI-PGF\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##MIGS-Data-START##\ninvestigation_type :: bacteria_archaea\nproject_name :: Thermosediminibacter oceani JW/IW-1228P, DSM\n 16646\ncollection_date :: Missing\nlat_lon :: Missing\ndepth :: 252 meters\nalt_elev :: Missing\ncountry :: Peru\nenvironment :: Deep sea, Sediment, Soil\nnum_replicons :: 1\nref_biomaterial :: DSM 16646, ATCC BAA-1034\nbiotic_relationship :: Free living\ntrophic_level :: Missing\nrel_to_oxygen :: Anaerobe\nisol_growth_condt :: Missing\nsequencing_meth :: WGS\nassembly :: Newbler v. 2.3 (pre-release)\nfinishing_strategy :: Finished\nGOLD Stamp ID :: Gi02252\nType Strain :: Yes\nIsolation Site :: Deep sea sediments (252 m below sea level)\n of Peru Margin collected during Leg 201 of\n the Ocean Drilling Program\nCell Shape :: Rod-shaped\nMotility :: Motile\nTemperature Range :: Thermophile\nTemperature Optimum :: 52 - 76C\npH :: 6.3 - 9.3\nGram Staining :: Gram-\nDiseases :: None\nP…

sequence
subclass of: SO_0000340
sequence length: 2280035
topology: circular
so has quality: SO_0000988
location: 1..2280035
location: region:1-2280035:1
RO_0002162: 555079

NC_014377
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN00713558
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Thermosediminibacter oceani type strain (JW/IW-1228P)
author: Pitluck, S.
author: Yasawong, M.
author: Munk, C.
author: Nolan, M.
author: Lapidus, A.
author: Lucas, S.
author: Glavina Del Rio, T.
author: Tice, H.
author: Cheng, J.F.
author: Bruce, D.
author: Detter, C.
author: Tapia, R.
author: Han, C.
author: Goodwin, L.
author: Liolios, K.
author: Ivanova, N.
author: Mavromatis, K.
author: Mikhailova, N.
author: Pati, A.
author: Chen, A.
author: Palaniappan, K.
author: Land, M.
author: Hauser, L.
author: Chang, Y.J.
author: Jeffries, C.D.
author: Rohde, M.
author: Spring, S.
author: Sikorski, J.
author: Goker, M.
author: Woyke, T.
author: Bristow, J.
author: Eisen, J.A.
author: Markowitz, V.
author: Hugenholtz, P.
author: Kyrpides, N.C.
author: Klenk, H.P.
journal: Stand Genomic Sci
volume: 3
issue: 2
pages: 108-116
year: 2010
pubmed: 21304740
comments: Publication Status: Online-Only

21304740
type: PubMed
SIO_000068: pubmed

2
title: The complete genome of Thermosediminibacter oceani DSM 16646
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Kyrpides, N.
author: Mavromatis, K.
author: Ivanova, N.
author: Ovchinnikova, G.
author: Detter, J.C.
author: Han, C.
author: Tapia, R.
author: Land, M.
author: Hauser, L.
author: Markowitz, V.
author: Cheng, J.-F.
author: Hugenholtz, P.
author: Woyke, T.
author: Wu, D.
author: Spring, S.
author: Schroeder, M.
author: Schneider, S.
author: Klenk, H.-P.
author: Eisen, J.A.
journal: Unpublished

3
title: Direct Submission
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Kyrpides, N.
author: Mavromatis, K.
author: Ivanova, N.
author: Ovchinnikova, G.
author: Munk, A.C.
author: Detter, J.C.
author: Han, C.
author: Tapia, R.F.
author: Land, M.
author: Hauser, L.
author: Markowitz, V.
author: Cheng, J.-F.
author: Hugenholtz, P.
author: Woyke, T.
author: Wu, D.
author: Spring, S.
author: Schroeder, M.
author: Schneider, S.
author: Klenk, H.-P.
author: Eisen, J.A.
journal: Submitted (02-AUG-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2280035:1
position: 2280035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2280035:1:source
so part of: sequence
organism: Thermosediminibacter oceani DSM 16646
mol type: genomic DNA
strain: DSM 16646
isolation source: deep sea sediment
type material: type strain of Thermosediminibacter oceani
country: Peru

555079
type: Taxonomy
SIO_000068: taxonomy

TOCE_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: dnaA
locus tag: TOCE_RS00005
old locus tag: Toce_0001
so part of: sequence
location: 102..1451
location: region:102-1451:1
so has part: feature:102-1451:1:exon
subclass of: SO_0000010

position:102:1
position: 102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451:1
position: 1451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102-1451:1:exon

TOCE_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: dnaA
locus tag: TOCE_RS00005
old locus tag: Toce_0001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777140.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosomal replication initiator protein DnaA
translation: MTHNLPDLWQQVLKTLGSELNNDVSFNTFLKPTKLVSIEDDIAIVEVPNEFLKGILEKRYANLLKDILGSILNRSVSIFFKIDPLASEEQASTVDTAEKDIKPVAEEGQSTLNSKYTFDTFVVGNSNRFAHAASLAVAQAPAKAYNPFFIYGGVGLGKTHLMHAIGHYILQHNPSCKVVYVSSEKFTNELINSIRDDKNVEFRNKYRNIDVLLIDDIQFIAGKERTQEEFFHTFNALYEANKQIIISSDRPPKEIPTLEERLRSRFEWGLITDIQPPDFETRIAILRKKAMMENLTVPDDVINFIATKIETNIRELEGALIRIVAFSSLTNKPIDLDLAEHVLKDLLPNNKPKTVTVMDILQVVGGHFSIKIDDFKSKKRTKELAYARQIAMYLCRELTDYSLPKIGEEFGGRDHTTVLHACEKISRDIQRDAQLSSLIENLKKKILHG
SIO_010081: TOCE_RS00005
subclass of: SO_0000673
so part of: TOCE_RS00005
location: 102..1451
location: region:102-1451:1
so has part: feature:102-1451:1:exon

WP_013274850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102-1451:1:exon

TOCE_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: dnaN
locus tag: TOCE_RS00010
old locus tag: Toce_0002
so part of: sequence
location: 1702..2814
location: region:1702-2814:1
so has part: feature:1702-2814:1:exon
subclass of: SO_0000010

position:1702:1
position: 1702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2814:1
position: 2814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1702-2814:1:exon

TOCE_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: dnaN
locus tag: TOCE_RS00010
old locus tag: Toce_0002
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:TIGR00663.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MQFLIEKDQLLSGVSVAERFIASKTTMPILSGIKFSAYGSTLELSSTDLEMGIECRLPAQIMEEGDAVISTKVFSDIARKLPQGQVLFRRQEGQITVEAGDFRLNMPVLEAGDFPEVVPPETNPILKFPKETFKNMVKQTIFARAEDSIARPVLTGELLEARNGRFHVVALDGFRIAWRWEEAEVPDFSVVVPGRALLELTRALSDTGEDTFEIHTGRNRVVFCTENLVMATRVLEGKFIDYEQVVKVDPKITVVAKTDALLSSIERAFIVAREGSKNNLVKFRIGNGRMEVSSETEMGSVYEKVECETSGDDLVVAFNARFFIEALRSVEQPEIELKFAGEVGPCVIRPRNVENHINFILPVRLRSEDY
SIO_010081: TOCE_RS00010
subclass of: SO_0000673
so part of: TOCE_RS00010
location: 1702..2814
location: region:1702-2814:1
so has part: feature:1702-2814:1:exon

WP_013274851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1702-2814:1:exon

TOCE_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00015
old locus tag: Toce_0003
so part of: sequence
location: 2811..3029
location: region:2811-3029:1
so has part: feature:2811-3029:1:exon
subclass of: SO_0000010

position:2811:1
position: 2811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3029:1
position: 3029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2811-3029:1:exon

TOCE_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00015
old locus tag: Toce_0003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777142.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-binding S4 domain-containing protein
translation: MREVFIKTESINLDQFLKWAGAVFTGGEAKIKIRQGLVKVNGQVETRRSRKLFPGDTVEFHGETFVVKGGSE
SIO_010081: TOCE_RS00015
subclass of: SO_0000673
so part of: TOCE_RS00015
location: 2811..3029
location: region:2811-3029:1
so has part: feature:2811-3029:1:exon

WP_013274852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2811-3029:1:exon

TOCE_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: recF
locus tag: TOCE_RS00020
old locus tag: Toce_0004
so part of: sequence
location: 3031..4134
location: region:3031-4134:1
so has part: feature:3031-4134:1:exon
subclass of: SO_0000010

position:3031:1
position: 3031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4134:1
position: 4134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3031-4134:1:exon

TOCE_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: recF
locus tag: TOCE_RS00020
old locus tag: Toce_0004
inference: COORDINATES: protein motif:HMM:NF000823.0
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA replication/repair protein RecF
translation: MHLTKIRLFDFRNFREAEVEFSGGLNVLYGDNGQGKTNLLEAIHFLCNLRPVRTTREQDVIAWDKTKAYLKGVFDTSSGPVDRELLLVAGDRKKVRECGVERHRLSELYWQIHAVFFSPDDLSLVKGRPSERRRFLDLIIARLKPQYGRYLSEYNRALFHRNRLLKDLKKNRTLITALDAWDEQLSSLGTVILKTRAAFTEKLFPLVRKYYLYFSREEREIEIKYAGSIVSTGTSPESIHEAFLAALRKSLPQDLASGYTRVGPHRDDLQFLLGGRDLRYFGSQGEQRTLSLSLKFAERRVFFETTGVYPILLLDDAMSELDANRRRWILEGEEPCQVFVTTVDLSAIPEDILKKSRVYRVRAGSVG
SIO_010081: TOCE_RS00020
subclass of: SO_0000673
so part of: TOCE_RS00020
location: 3031..4134
location: region:3031-4134:1
so has part: feature:3031-4134:1:exon

WP_013274853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3031-4134:1:exon

TOCE_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00025
old locus tag: Toce_0005
so part of: sequence
location: 4139..4624
location: region:4139-4624:1
so has part: feature:4139-4624:1:exon
subclass of: SO_0000010

position:4139:1
position: 4139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4624:1
position: 4624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4139-4624:1:exon

TOCE_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00025
old locus tag: Toce_0005
inference: COORDINATES: protein motif:HMM:NF017103.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF721 domain-containing protein
translation: MEKIKNILLKILKKTDLERRLREAMVFVHYEEMVGEKIARVSKPVFFRGDTLFIGVESPIWAHQLLFFKSDIINRINSRFSPPLVKDIRFQVCRVDGRPESHKKDVKEDVEVKIPDKKKQMVYNITSNIKDEKLRQKFTELMLKDLEFKIKRGESLVPSHR
SIO_010081: TOCE_RS00025
subclass of: SO_0000673
so part of: TOCE_RS00025
location: 4139..4624
location: region:4139-4624:1
so has part: feature:4139-4624:1:exon

WP_013274854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4139-4624:1:exon

TOCE_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00030
old locus tag: Toce_0006
so part of: sequence
location: 4605..4862
location: region:4605-4862:1
so has part: feature:4605-4862:1:exon
subclass of: SO_0000010

position:4605:1
position: 4605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4862:1
position: 4862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4605-4862:1:exon

TOCE_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00030
old locus tag: Toce_0006
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777145.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF370 domain-containing protein
translation: MFLHIGKNTVVRTKDIIMILDRACTESRDTSDFLQVAREEGFVITGEEAGKSIIVTDKKVYFSPISSITLLKRANFIKGIGEQSF
SIO_010081: TOCE_RS00030
subclass of: SO_0000673
so part of: TOCE_RS00030
location: 4605..4862
location: region:4605-4862:1
so has part: feature:4605-4862:1:exon

WP_013274855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4605-4862:1:exon

TOCE_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: gyrB
locus tag: TOCE_RS00035
old locus tag: Toce_0007
so part of: sequence
location: 4864..6792
location: region:4864-6792:1
so has part: feature:4864-6792:1:exon
subclass of: SO_0000010

position:4864:1
position: 4864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6792:1
position: 6792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4864-6792:1:exon

TOCE_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: gyrB
locus tag: TOCE_RS00035
old locus tag: Toce_0007
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015294737.1
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit B
translation: MEVLVLEKKTVYDETKIEVLEGLEHVRLRPGMYIGSTDSRGLHHLVYEVVDNSIDEALAGFCKNILVTINKDGSITVDDDGRGIPVKIHPKVGKPALEVALTMLHAGGKFGTGGYKVSGGLHGVGVSVVNALSKWLEVEVKRDGFKYFQRYERGKPVTEVKKIGEASDTGTKITFMPDDQIFEDTSFNYDILAQRLREQAFLNRGLKIEIKDLRTGKEQVFHYEGGIVSFVKYLNRNKDVLHEDPIYMRAASQEGEWEVEVALQYNDSYAENVLSFANNINTQEGGTHLVGFKSALTRSINDYARKMNLLKEQDPNLSGDDVREGLTAVISVKLVNPQFEGQTKTKLGNSEMRGIVESVVGDAMNRFLEENPSVARVIVEKAISAARAREAARKARELVRRKNALDRTSLPGKLADCREKDPRLCELYLVEGDSAGGSAKQGRDPRFQAILPLRGKILNVEKARLDKILGNEEIRAMITALGTGIGDDFDIEKLRYHKIILMADADVDGAHIRTLLLTFLYRYMRPLIEAGMVYIAQPPLYQVSKGKEVYYAYSDEELKAILERLGKDRDKAEVKRFKGLGEMNADQLWDTTMNPKTRTILKVNLEDAIEADEIFTILMGEKVEPRRQFIFEHAAEVRNLDI
SIO_010081: TOCE_RS00035
subclass of: SO_0000673
so part of: TOCE_RS00035
location: 4864..6792
location: region:4864-6792:1
so has part: feature:4864-6792:1:exon

WP_281054638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4864-6792:1:exon

TOCE_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: gyrA
locus tag: TOCE_RS00040
old locus tag: Toce_0008
so part of: sequence
location: 6807..9236
location: region:6807-9236:1
so has part: feature:6807-9236:1:exon
subclass of: SO_0000010

position:6807:1
position: 6807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9236:1
position: 9236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6807-9236:1:exon

TOCE_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: gyrA
locus tag: TOCE_RS00040
old locus tag: Toce_0008
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777147.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA gyrase subunit A
translation: MSELGGKVVPVTIEDEMKKSYIDYAMSVIVGRALPDVRDGLKPIHRRILYAMSELNLTPDRPHRKSATIVGDVMGKYHPHGDAAIYDAMVRLAQDFSIRYPLIDGHGNFGSIDGDPPAAMRYTEARLSRIALEMLSDIDKDTVDFIPNFDDTLKEPAVLPSRFPNLLVNGSSGIAVGMATNIPPHNLSEVIDGVVMMIENPDVTSQELMAAIKGPDFPTGGIILGREGIREMYTTGRGSIIVRAKATIEPMEGGKQRIVVTEIPYMVNKARLIEKIAELVRDKHLDGISDLRDESDRNGLRIVIELKRDANAHVILNQLYKHTQMQVTFGAIMLALVENKPQVLTLREMIYHYLRHQQEVVVRRTKYELARAEERVHILEGLRIALNHLDEVIALIRKSKDVPTAREGLMKNFGLTEKQAQVILDMRLQRLTALERQKIEDEYRELLEKIDYYKRVLGDEKLVFAIIKEELLKIKERFGDERRTRIVAEVKDFDEQDLIPEEDVVITMTYMGYVKRMPLSSYRSQKRGGKGVTGITTREEDFVERILVATTHHVVLFFTNQGNVYRLKAHEIPEAGRTAKGTAIVNLLPLKPQEKVNAVIPIKDFGEASYLVMVTKRGLVKKTLLSEYESSRKTGIIAITLTSGDELIGVKLVGKKDELILGTSHGMSIRFSVEDVTPTGRTARGVKAITLGEGDEVASMDVTSVGSDVLVITEKGFGKRTPLDEYRIQTRGGRGIITQRVTDTTGRLVGLRVVAEGDDIILCTASGMMIRLEVSGISSMSRNTRGVTLMKLEEGDQVSAVAVIRESED
SIO_010081: TOCE_RS00040
subclass of: SO_0000673
so part of: TOCE_RS00040
location: 6807..9236
location: region:6807-9236:1
so has part: feature:6807-9236:1:exon

WP_013274857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6807-9236:1:exon

TOCE_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00045
old locus tag: Toce_0009
so part of: sequence
location: complement(9233..9481)
location: region:9233-9481:-1
so has part: feature:9233-9481:-1:exon
subclass of: SO_0000010

position:9233:-1
position: 9233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9481:-1
position: 9481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9233-9481:-1:exon

TOCE_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00045
old locus tag: Toce_0009
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEFQFNCPLCNGLISVRETCPECGSLMEDWGRVQDYLDPYHPYLDMNTTAPGEQREKKCVHLFKCPQCGRDTRLVVNQVIAP
SIO_010081: TOCE_RS00045
subclass of: SO_0000673
so part of: TOCE_RS00045
location: complement(9233..9481)
location: region:9233-9481:-1
so has part: feature:9233-9481:-1:exon

WP_013274858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9233-9481:-1:exon

TOCE_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00050
old locus tag: Toce_0010
so part of: sequence
location: 9559..10998
location: region:9559-10998:1
so has part: feature:9559-10998:1:exon
subclass of: SO_0000010

position:9559:1
position: 9559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10998:1
position: 10998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9559-10998:1:exon

TOCE_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00050
old locus tag: Toce_0010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777148.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminotransferase class V-fold PLP-dependent enzyme
translation: MGTKVSMPLVEKLILYSGKSPVRFHMPGHKGGRGVPKNLRLMMEKNLFRWDVTEIPGLDNWHDPEGAIEEAQRLLAELYGADRSYFLVNGSTSGVMAMLGAALEKGDEVLLPRNSHKAALMGIILTGAKPVYLKPQVDEELGVATGVPLSEWRKALEQHPDAKALFITNPTYQGFCPNLSGISSEAKARGMKVLVDEAHGPHLAFSKRLPSSAGECKVDVWVQSPHKMLCSLTQSAWLHLKGRDLDRERLRSYLSLLTSTSPSYILMASLDVARAVMETRGRYWVERGLELAERARRSINEKTPFYCVGREVRGRRGVYDVDLSRLMVNVSSAGYTGFFVEKVLRKRFHIYAEYADFSNVYFLLTGGNTRDDVAKLVRALKRFPARKKKIKSVCFPGDLPERAMDPGKAYFSPAEWIHLDAAFGRITSDAVVPYPPGVPLLYPGEVVEKQHIEVIREIQKAGGYCQGIKNGRIKVVKNG
SIO_010081: TOCE_RS00050
subclass of: SO_0000673
so part of: TOCE_RS00050
location: 9559..10998
location: region:9559-10998:1
so has part: feature:9559-10998:1:exon

WP_041423798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9559-10998:1:exon

TOCE_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: tmk
locus tag: TOCE_RS00055
old locus tag: Toce_0011
so part of: sequence
location: 10991..11626
location: region:10991-11626:1
so has part: feature:10991-11626:1:exon
subclass of: SO_0000010

position:10991:1
position: 10991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11626:1
position: 11626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10991-11626:1:exon

TOCE_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: tmk
locus tag: TOCE_RS00055
old locus tag: Toce_0011
EC number: 2.7.4.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015294738.1
GO function: GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO process: GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTMP kinase
translation: MARNLRKGKFITIEGPDGAGKTTQAEKIVQYLKSKGKRVISTREPGGTALGEQLRKVLLDPEGSPVSNAEALIYAACRAQLLERMVIPALREGFTVVCDRFVDSSLAYQGWARGIGINRILQLNKWVIGSYWPDITILLDVDPAVSLGRLVGGRKDRLESEALEFHQKVREGYMKVREMFPDRIRIIDASQPADEVFRQIVAELEKAGVVE
SIO_010081: TOCE_RS00055
subclass of: SO_0000673
so part of: TOCE_RS00055
location: 10991..11626
location: region:10991-11626:1
so has part: feature:10991-11626:1:exon

WP_013274860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10991-11626:1:exon

TOCE_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00060
old locus tag: Toce_0012
so part of: sequence
location: 11661..11978
location: region:11661-11978:1
so has part: feature:11661-11978:1:exon
subclass of: SO_0000010

position:11661:1
position: 11661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11978:1
position: 11978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11661-11978:1:exon

TOCE_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00060
old locus tag: Toce_0012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777150.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cyclic-di-AMP receptor
translation: MLMAVVQDIDAPKLVEELTKNNVGVTRLTSTGGFLKRGNTTLMIGVEEERLEDVMKMIERICRPRKQVVTPFPAAPGDTMIPYPIEVTVGGATVFVMNVERFEKI
SIO_010081: TOCE_RS00060
subclass of: SO_0000673
so part of: TOCE_RS00060
location: 11661..11978
location: region:11661-11978:1
so has part: feature:11661-11978:1:exon

WP_245523192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11661-11978:1:exon

TOCE_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00065
old locus tag: Toce_0013
so part of: sequence
location: 11975..12418
location: region:11975-12418:1
so has part: feature:11975-12418:1:exon
subclass of: SO_0000010

position:11975:1
position: 11975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12418:1
position: 12418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11975-12418:1:exon

TOCE_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00065
old locus tag: Toce_0013
inference: COORDINATES: protein motif:HMM:NF015822.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YaaR family protein
translation: MIKVRGLSSEEVSTASGYVSHRAASGGSRFQEILRSAREVCAKEQLEGMLASIEEQGRRLVKTMSLADLKKYREMLARFLRQCVESGLDLKEERFFTRYGRQKVLTAVKIVDRKLMELAELILSKSDAVKVLAIVDEIRGLLLDLYA
SIO_010081: TOCE_RS00065
subclass of: SO_0000673
so part of: TOCE_RS00065
location: 11975..12418
location: region:11975-12418:1
so has part: feature:11975-12418:1:exon

WP_013274862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11975-12418:1:exon

TOCE_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00070
old locus tag: Toce_0014
so part of: sequence
location: 12411..13217
location: region:12411-13217:1
so has part: feature:12411-13217:1:exon
subclass of: SO_0000010

position:12411:1
position: 12411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13217:1
position: 13217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12411-13217:1:exon

TOCE_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00070
old locus tag: Toce_0014
inference: COORDINATES: protein motif:HMM:NF024575.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRNVFHAYILIGSEEETTEKALELAQAANCNDDGLPCGFCDCCRRIREGSHPDLFHVFPDGSSIKIEKIRNVILSASQPPIEGRRKIYVIHEAGKMTQDAQNTLLKTLEDPPTASIFLLLTQNIKNLLPTVVSRCQILDYSKLDESEIPIPGDVKETLMDIIFSRPDLSKIHFYVQKLTGTEIDPDVLMEFMAGVYRDLLVIKTKSRASIKNREFLNRLKEQAAKFSPRALVAAIDTLYSQIEAVKSRGNANLVWFNLLLRLQEQEVI
SIO_010081: TOCE_RS00070
subclass of: SO_0000673
so part of: TOCE_RS00070
location: 12411..13217
location: region:12411-13217:1
so has part: feature:12411-13217:1:exon

WP_041423960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12411-13217:1:exon

TOCE_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00075
old locus tag: Toce_0015
so part of: sequence
location: 13219..14052
location: region:13219-14052:1
so has part: feature:13219-14052:1:exon
subclass of: SO_0000010

position:13219:1
position: 13219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14052:1
position: 14052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13219-14052:1:exon

TOCE_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00075
old locus tag: Toce_0015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777153.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stage 0 sporulation family protein
translation: MVKVVGVRFKRAGKIYYFNPGTIELSVGDKVIVETARGIEYGEVVIGPKDVREEDVITPLKDVIRKATPEDKMVAEENRVKAREAADIAVKKIQEHGLEMKLVDVEYTFDRSKLIFYFTADGRVDFRELVKDLASIFRTRIELRQIGVRDEAKMVGGLGPCGRVACCHTFLGEFDPVSIKMAKQQNLSLNPGKISGLCGRLMCCLRFEYDGYCEAAKCCESCKEAGGLPEVDSEVITPDGEGTVVSVNKDKGAVTVRLAENGEKKEFPAEEVELKGS
SIO_010081: TOCE_RS00075
subclass of: SO_0000673
so part of: TOCE_RS00075
location: 13219..14052
location: region:13219-14052:1
so has part: feature:13219-14052:1:exon

WP_013274864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13219-14052:1:exon

TOCE_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00080
old locus tag: Toce_0016
so part of: sequence
location: 14135..14836
location: region:14135-14836:1
so has part: feature:14135-14836:1:exon
subclass of: SO_0000010

position:14135:1
position: 14135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14836:1
position: 14836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14135-14836:1:exon

TOCE_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00080
old locus tag: Toce_0016
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777154.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc metallopeptidase
translation: MFPIWFFDPTLIILLPALVLAFYAQAKVSTTFERYLRVPARVGLTGAEVARELLRRNGIYDVTVEMTGGRLSDYYDPRRKVLRLSPDVYNGRSLAALGVAAHECGHAIQHNIGYVPLVFRNTIVPLAGIGSQMAFPLFFIGLLFSSEFLATLGILFFSAAVIFQLITLPVEYNASSRAVAALEGAGFIYPDEVGPVRSVLSAAALTYVAATLMAVLQLLRLIALFGLYNRDDR
SIO_010081: TOCE_RS00080
subclass of: SO_0000673
so part of: TOCE_RS00080
location: 14135..14836
location: region:14135-14836:1
so has part: feature:14135-14836:1:exon

WP_013274865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14135-14836:1:exon

TOCE_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: dapA
locus tag: TOCE_RS00085
old locus tag: Toce_0017
so part of: sequence
location: 14959..15834
location: region:14959-15834:1
so has part: feature:14959-15834:1:exon
subclass of: SO_0000010

position:14959:1
position: 14959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15834:1
position: 15834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14959-15834:1:exon

TOCE_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: dapA
locus tag: TOCE_RS00085
old locus tag: Toce_0017
EC number: 4.3.3.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777157.1
GO function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-tetrahydrodipicolinate synthase
translation: MDFGRVITAMVTPFDGDLNVDYAAFENLVDHLIKNGSDALVVTGTTGESPTLSDEEKLTLYKLAKEVAGGRAKIIAGTGSYNTRHSIELSLKAQEIGVDGLLLVSPYYNKPTQEGLYQHFKMIAEAVDIPVMLYNVPGRTAVTIEPETLMKLSKVKNIVAVKDAGGNLDKTSKTRLLAPDLTVYSGDDSLTLPMLALGAKGIVSVASHIVGREIKEMIESFEKGDVNRAREIHLKLFDLFKVLFIVTNPIPVKEAMNMIGVKVGGLRPPLTPADEKTKEAIKETLQALGLV
SIO_010081: TOCE_RS00085
subclass of: SO_0000673
so part of: TOCE_RS00085
location: 14959..15834
location: region:14959-15834:1
so has part: feature:14959-15834:1:exon

WP_013274866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14959-15834:1:exon

TOCE_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: hslO
locus tag: TOCE_RS00090
old locus tag: Toce_0018
so part of: sequence
location: complement(15926..16828)
location: region:15926-16828:-1
so has part: feature:15926-16828:-1:exon
subclass of: SO_0000010

position:15926:-1
position: 15926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16828:-1
position: 16828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15926-16828:-1:exon

TOCE_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: hslO
locus tag: TOCE_RS00090
old locus tag: Toce_0018
inference: COORDINATES: protein motif:HMM:NF001033.0
GO function: GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp33 family molecular chaperone HslO
translation: MTGLKDYMVRAIDEEAGILAFAARTTELVEKARTIHGCSPTATAALGRLLTAAAMMGSMLKGEGDTVTVRVDGGGPAGPLIAFSDSRGNVKGYIGNPSADLPLNEKGKLDVGGIVGREGTLTVIKDLGLKEPFVGRVPLISGEIAEDITYYFARSEQVPSAVSLGVLVDRDRRVRAAGGFIIQLMPGSTEETAIFIEEKIKGMKPVTELLDEKNSPEDLINLILPGFKLRFLASQPVNYSCSCSRERLEGVLLNLGREEAEEILKAQGRVEFVCQYCREKYEFTGEDVRRIFESAENPAS
SIO_010081: TOCE_RS00090
subclass of: SO_0000673
so part of: TOCE_RS00090
location: complement(15926..16828)
location: region:15926-16828:-1
so has part: feature:15926-16828:-1:exon

WP_013274867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15926-16828:-1:exon

TOCE_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00095
old locus tag: Toce_0019
so part of: sequence
location: 16983..17840
location: region:16983-17840:1
so has part: feature:16983-17840:1:exon
subclass of: SO_0000010

position:16983:1
position: 16983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17840:1
position: 17840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16983-17840:1:exon

TOCE_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00095
old locus tag: Toce_0019
EC number: 3.-.-.-
inference: COORDINATES: protein motif:HMM:NF013672.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide deacetylase family protein
translation: MRKPLIAGILIAIGILLLWAHINGYELRLVPNRREFQTPKYQSRSPKEITEHFKLAGGSERDNRGFPQRKIDDLSSKLPELFYREGPRNVKMVALTFDDGPDSVYTPQILDVLKEQNVKATFFLVGKRAELFPDVVRRMVREGHVVGNHTWSHPNIIKMNNEDMVREILRAEETLSKLTGYRPALFRSPYGSIDEARVKEIAKLNYKVIAWSVDSLDWKSLTAEQVKTNILENVREGSIILQHSAGGGEDLSGSVAALKDVIVTLKKEGYRFVTIPELLKIPYKK
SIO_010081: TOCE_RS00095
subclass of: SO_0000673
so part of: TOCE_RS00095
location: 16983..17840
location: region:16983-17840:1
so has part: feature:16983-17840:1:exon

WP_013274868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16983-17840:1:exon

TOCE_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: thiE
locus tag: TOCE_RS00100
old locus tag: Toce_0020
so part of: sequence
location: complement(17817..18455)
location: region:17817-18455:-1
so has part: feature:17817-18455:-1:exon
subclass of: SO_0000010

position:17817:-1
position: 17817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18455:-1
position: 18455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17817-18455:-1:exon

TOCE_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: thiE
locus tag: TOCE_RS00100
old locus tag: Toce_0020
EC number: 2.5.1.3
inference: COORDINATES: protein motif:HMM:TIGR00693.1
GO function: GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine phosphate synthase
translation: MKPDFTLYAVTERSYLHGRDLVEAVEEAIRAGITVLQLREKDAPGREFYELALRLRELTRVYGIPFIINDRVDIALAVDADGVHVGQEDIPADVARKIIGPGKILGVSAKTVEEAIRAEKDGADYLGVGAIFPSPTKPSSEAIGLEGLIKIKNAVKIPVVAIGGITVQNANEVMATGVDGICCISAVFCGDITENVRALRRAISQSFFIGDF
SIO_010081: TOCE_RS00100
subclass of: SO_0000673
so part of: TOCE_RS00100
location: complement(17817..18455)
location: region:17817-18455:-1
so has part: feature:17817-18455:-1:exon

WP_013274869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17817-18455:-1:exon

TOCE_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: thiD
locus tag: TOCE_RS00105
old locus tag: Toce_0021
so part of: sequence
location: complement(18475..19278)
location: region:18475-19278:-1
so has part: feature:18475-19278:-1:exon
subclass of: SO_0000010

position:18475:-1
position: 18475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19278:-1
position: 19278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18475-19278:-1:exon

TOCE_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: thiD
locus tag: TOCE_RS00105
old locus tag: Toce_0021
EC number: 2.7.1.49
EC number: 2.7.4.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501984.1
GO function: GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
translation: MKLALTIAGSDSGGGAGIQADLKTFSAHGVFGMSVITSVTAQNTKAVIGVEDISPEMVYLQIKAVFEDLPPDAVKIGMVSSASIIRSVAKGLDEFGPEKVVLDPVMISKSGHALLKPDAVEALKRELLPRCLVVTPNIPEAKALTGMSIKGVEDMERAAEKIMSYGCRAVVVKGGHLEGDAVDVFFDGREFHRLKSERIFSRNTHGTGCTFSSAIAANLALGRDLFTAVKLAKEYITGAIKNSMDIGGGAGPVHHFYELYRRAGLNV
SIO_010081: TOCE_RS00105
subclass of: SO_0000673
so part of: TOCE_RS00105
location: complement(18475..19278)
location: region:18475-19278:-1
so has part: feature:18475-19278:-1:exon

WP_013274870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18475-19278:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 555079
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00059
inference: COORDINATES: profile:INFERNAL:1.1.4
note: TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: thiamine pyrophosphate
so part of: sequence
location: complement(19355..19461)
location: region:19355-19461:-1
so has part: feature:19355-19461:-1:region

position:19355:-1
position: 19355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19461:-1
position: 19461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19355-19461:-1:region

TOCE_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00115
old locus tag: Toce_0022
so part of: sequence
location: complement(19577..20122)
location: region:19577-20122:-1
so has part: feature:19577-20122:-1:exon
subclass of: SO_0000010

position:19577:-1
position: 19577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20122:-1
position: 20122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19577-20122:-1:exon

TOCE_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00115
old locus tag: Toce_0022
EC number: 2.-.-.-
inference: COORDINATES: protein motif:HMM:NF024812.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family protein
translation: MFTGEKVRLRAYRKEDLEKALQFINDPEVKRFLAPGIPFPLTESDEEKFISKQSGFNTDAYSFAIETLEGEYIGGCGINSTDWKNSVAVVGIFIGNKDYWGKGYGTDAMRVLLRFIFEQMNINKVKLFVYDFNKRAIRCYEKCGFKVEGVLRQEIYRDGRYHDELAMGILRSEWFGAGNKK
SIO_010081: TOCE_RS00115
subclass of: SO_0000673
so part of: TOCE_RS00115
location: complement(19577..20122)
location: region:19577-20122:-1
so has part: feature:19577-20122:-1:exon

WP_013274871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19577-20122:-1:exon

TOCE_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rsmI
locus tag: TOCE_RS00120
old locus tag: Toce_0023
so part of: sequence
location: 20400..21275
location: region:20400-21275:1
so has part: feature:20400-21275:1:exon
subclass of: SO_0000010

position:20400:1
position: 20400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21275:1
position: 21275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20400-21275:1:exon

TOCE_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rsmI
locus tag: TOCE_RS00120
old locus tag: Toce_0023
EC number: 2.1.1.198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016293289.1
GO function: GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
translation: MAEKKEPGILYLCPTPIGNLEDITLRVLRVLKEVDYIAAEDTRVTRKLLNHYDIKTPLTSYREHNRAKKGDEIITDLLAGKSVALVSDAGTPGISDPGEDLVKKAVEAGIRVVPLPGPSAVICAVAASGLSTGKFVFEGFLPQKSTERQKRLAELKEEERTIVIYEAPHRLLKALSDIREILGNRRITVAREMTKVHEEFFRGSIEEAIIRYQSAPPRGEIVLVLEGSSCDKGETGGLDLEDEGSRRLLLEKIKTYMSRGMDKKQALKTAAKELGVPKREAYKLLVKSERE
SIO_010081: TOCE_RS00120
subclass of: SO_0000673
so part of: TOCE_RS00120
location: 20400..21275
location: region:20400-21275:1
so has part: feature:20400-21275:1:exon

WP_013274872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20400-21275:1:exon

TOCE_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: proC
locus tag: TOCE_RS00125
old locus tag: Toce_0024
so part of: sequence
location: 21357..22187
location: region:21357-22187:1
so has part: feature:21357-22187:1:exon
subclass of: SO_0000010

position:21357:1
position: 21357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22187:1
position: 22187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21357-22187:1:exon

TOCE_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: proC
locus tag: TOCE_RS00125
old locus tag: Toce_0024
EC number: 1.5.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777171.1
GO function: GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO process: GO:0006561 - proline biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyrroline-5-carboxylate reductase
translation: MYNRLGFFGAGSMAEALLKGILSASVLAPEDIFVLNRKDDDRLKFFEKTYGVNTTRDYGRLVGECETLIIAVKPSDVKGVMLKIRDFLKEQHTIISVAAGITTSRIEEFAGKRIRVIRAMPNTSCQVKESATAITAGRHAGRDDLEKAFRIFSSVGQVIEVDEEWMDAVTALSGSGPAYVYLMMEALTEAGVKVGLPREVSYELAVQTVLGAAKMVKETGEHPASLRKKVTSPGGTTMAGIETLEKMGFTNCIIQAVNSAARRSRELMEGGSYGNC
SIO_010081: TOCE_RS00125
subclass of: SO_0000673
so part of: TOCE_RS00125
location: 21357..22187
location: region:21357-22187:1
so has part: feature:21357-22187:1:exon

WP_013274873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21357-22187:1:exon

TOCE_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00130
old locus tag: Toce_0025
so part of: sequence
location: complement(22259..22510)
location: region:22259-22510:-1
so has part: feature:22259-22510:-1:exon
subclass of: SO_0000010

position:22259:-1
position: 22259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22510:-1
position: 22510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22259-22510:-1:exon

TOCE_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00130
old locus tag: Toce_0025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777172.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MKSTGVVRKVDELGRVVIPIELRRTLDISEKDALEIYVDTDKIILKKYQPGCIFCGSAENVISFKGKNICEKCAGQIEQTKKN
SIO_010081: TOCE_RS00130
subclass of: SO_0000673
so part of: TOCE_RS00130
location: complement(22259..22510)
location: region:22259-22510:-1
so has part: feature:22259-22510:-1:exon

WP_013274874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22259-22510:-1:exon

TOCE_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00135
old locus tag: Toce_0026
so part of: sequence
location: 22640..23596
location: region:22640-23596:1
so has part: feature:22640-23596:1:exon
subclass of: SO_0000010

position:22640:1
position: 22640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23596:1
position: 23596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22640-23596:1:exon

TOCE_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00135
old locus tag: Toce_0026
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777173.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA double-strand break repair nuclease NurA
translation: MQELNEGLKNEFRQAAGALRKRLEQRPNRAAMRAYIAGSGMGRFTKSRKMSNIELEQIAEKGGIAGVDGSTNSAGGIFPYVITLQQAMAKSTVAQEEIYFQRVMCPLLFEEALDEAGYQEMVKSSLAGLEARAALSAIEKFSPAVLLIDGSLVRLKIEAKHLWEKLKEAALDSGTLLAGVVEGISTRVISSALKGVLPEAVTGACDWELLFGVMDVGEGLEVAPGCFKEGFRTVFMRTSGDPKPIGIDLLEEQYEHLELVENLIYTLTPESGRGIPLWLDLIDKKVKISDATIEGLLKTYLGQDYAEFLTPKRAKRSP
SIO_010081: TOCE_RS00135
subclass of: SO_0000673
so part of: TOCE_RS00135
location: 22640..23596
location: region:22640-23596:1
so has part: feature:22640-23596:1:exon

WP_013274875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22640-23596:1:exon

TOCE_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00140
old locus tag: Toce_0027
so part of: sequence
location: 23690..25522
location: region:23690-25522:1
so has part: feature:23690-25522:1:exon
subclass of: SO_0000010

position:23690:1
position: 23690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25522:1
position: 25522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23690-25522:1:exon

TOCE_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00140
old locus tag: Toce_0027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777174.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MQVVGLTTPQEIFVASKERKFRINEILVIDDPYQGPLIGEVVEANSYNRFIPLSINHDFIDARVLESLERLGYSISEDEINIARVKLMTEASFPVTTGAKAHLPEFSEVRDFLVRSDAEGGLALGEIKNTEETASTMDENLKGLFYVYSRGERYRTRNVPFLLDLKSFQQYPHIGIFGGSGSGKSYGLRVIMEELMMKGIPSIILDPHYEMDFSAMEEGLEGAPDFRGAFRKFQIGEDIGVEFLALGKRDLLDLLSAVKPLTEAMSSAVEILHRRGDTFISFSSRLELLAEALELGRIRIEKMLQQDLEPAEREKYKKMKELIEEYPNIPLVSVQGIAWRLRRLHASGIFNYDIKPVKEALLSGKLAVIQGPIWLLQVFSTYLLSNLYRARRDYKDGELRGQNTADYFPPFVIATDEAHNFAPKGRDAASKGVITEIAQEGRKYGVFLVLATQRPTLLDETVTAQLNTKIIFRTVRGHDIATITEETDIGAEEARRLPYLPSGDAFVSSPLFGRTVAIRVRYPYTRSPHTLNPFDELKRYRVSAEEKLFGLLEPHLPVYDTNLLQVLQAINTDAPELKLEVKTLKESLDNLVKSGRLKKTETPFGAMYHS
SIO_010081: TOCE_RS00140
subclass of: SO_0000673
so part of: TOCE_RS00140
location: 23690..25522
location: region:23690-25522:1
so has part: feature:23690-25522:1:exon

WP_013274876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23690-25522:1:exon

misc_binding
type: Miscellaneous Binding Site
subclass of: SO_0000409
RO_0002162: 555079
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00230
inference: COORDINATES: profile:INFERNAL:1.1.4
note: T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: tRNA
so part of: sequence
location: 25566..25773
location: region:25566-25773:1
so has part: feature:25566-25773:1:region

position:25566:1
position: 25566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25773:1
position: 25773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25566-25773:1:region

TOCE_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: metG
locus tag: TOCE_RS00145
old locus tag: Toce_0028
so part of: sequence
location: 25792..27780
location: region:25792-27780:1
so has part: feature:25792-27780:1:exon
subclass of: SO_0000010

position:25792:1
position: 25792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27780:1
position: 27780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25792-27780:1:exon

TOCE_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: metG
locus tag: TOCE_RS00145
old locus tag: Toce_0028
EC number: 6.1.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777206.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
GO process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine--tRNA ligase
translation: MRAKWVTVLQNRNLGGTMMKDRIFYITTPIYYVNAQPHIGHAYTTIVADFLARWHRLAGYDTFFLTGTDEHGEKIAQAAQKNGEEPQAFVDRVSARFREAWEKLCIEYDDFIRTTDERHKKVVQYVLQKVYDAGDIYYGEYEGLYCVGCERFLTEKELVDGRCPDHGTVPERRREGNYFFRMEKYREWLRDYIQANPDFIRPEGYRNEVLSMLSEPVGDLSISRPRQRVPWGIPLPWDEDHVTYVWFDALLNYVSALGYPDGEKYHRFWTHAWHLVGKDILKPHAVFWPTMLKSAGIPLYRHLNVGGFLLGPDGRKMSKSLGNVVDPFALAEKYGPDVVRYYLLRELPYGQDGAVGEPGLVERYNADLANDLGNLLSRTVTMIEKFYSGYIPAPGLSEGPDHELIALAEGLPDRLENLINGLEITEALKEIWKFIGRANKYIDETAPWTLAKDPAKKERLATVIYNLAEALRIISVHISPVMPNTSGEIRRQLGIADEGLFTWESVRKWGRLPAGLKIGGKRIIFPRIENKSASGKEAKAVEQKDTAVNRDESREGLITIDDFAKIDLRVAVVLEAERIEGADKLLKLKVKIGEEERQIVAGIAKHYTPEELVGKKIVVVANLKPAKLRGVESQGMLLAASTKDKLTLVTVENDIEPGAKVK
SIO_010081: TOCE_RS00145
subclass of: SO_0000673
so part of: TOCE_RS00145
location: 25792..27780
location: region:25792-27780:1
so has part: feature:25792-27780:1:exon

WP_245523128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25792-27780:1:exon

TOCE_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00150
old locus tag: Toce_0029
so part of: sequence
location: 27792..28568
location: region:27792-28568:1
so has part: feature:27792-28568:1:exon
subclass of: SO_0000010

position:27792:1
position: 27792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28568:1
position: 28568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27792-28568:1:exon

TOCE_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00150
old locus tag: Toce_0029
EC number: 3.1.-.-
inference: COORDINATES: protein motif:HMM:TIGR00010.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TatD family hydrolase
translation: MLVDVHAHLDDEAFDGDRDQLLEEIKSQGIKVINAGTDLETSRFSLQLAREYGFVYACVGVHPHEASRVPADYLDALREMARDPKVVAIGEIGLDYHYNFSPGDVQKEVFEEQLSLARELGLPVVVHSREADCDTLEILKKSGVRKSLMHCYSGSPEMAAELAELGFYFSFGGPLTFKNAAKTREVAAGLPRDRVLIETDCPYLTPEPFRGKRNDPTRLPYIAAALAQIWRVPVEEVVEITCRNAVSLFNIDLKPGRR
SIO_010081: TOCE_RS00150
subclass of: SO_0000673
so part of: TOCE_RS00150
location: 27792..28568
location: region:27792-28568:1
so has part: feature:27792-28568:1:exon

WP_013274878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27792-28568:1:exon

TOCE_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00155
old locus tag: Toce_0030
so part of: sequence
location: 28663..29268
location: region:28663-29268:1
so has part: feature:28663-29268:1:exon
subclass of: SO_0000010

position:28663:1
position: 28663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29268:1
position: 29268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28663-29268:1:exon

TOCE_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00155
old locus tag: Toce_0030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777210.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TatD family nuclease-associated radical SAM protein
translation: MIAYPIGDSLYLNITNRCPNRCSFCIRQLGDGIEGYNLWLDKEPTTKEIIEAIGDPSGYREVVFCGYGEPLMRLQVVLDVARYLKKNYPNLPIRINTNGLANLIYGEDITPQFKGLIDTVSISLNAENAQKYHELCRSDYGEDAFFSVLEFARRCKNYVPKVVLTVVDVPGIDIEKCKRIAEELGVGFRVRHYEGKDGEEN
SIO_010081: TOCE_RS00155
subclass of: SO_0000673
so part of: TOCE_RS00155
location: 28663..29268
location: region:28663-29268:1
so has part: feature:28663-29268:1:exon

WP_223156827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28663-29268:1:exon

TOCE_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rsmA
locus tag: TOCE_RS00160
old locus tag: Toce_0031
so part of: sequence
location: 29265..30113
location: region:29265-30113:1
so has part: feature:29265-30113:1:exon
subclass of: SO_0000010

position:29265:1
position: 29265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30113:1
position: 30113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29265-30113:1:exon

TOCE_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rsmA
locus tag: TOCE_RS00160
old locus tag: Toce_0031
EC number: 2.1.1.182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777211.1
GO function: GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
translation: MNARAIMREFGIRPSKRLGQHFLIDEAPLYKMLEAARLNESDEVLEIGPGLGVLTLELCRRAKKVVAVEKDPNLIPVLEKLTKSYNNICLLREDVLKLDMEKLWREYFDGKFKVVANLPYYITSPVIMKIINNRHLIEMAVIMIQKEVAHRLVAAPGNKDYGILSVAVQLYADVDLVCHVGRSAFLPPPKVDSAVVRLVLKEGSAVPLEDERLFFKVVEAAFGERRKTVKNSLRSRLSLFAGDVEEALERAGIDGSRRAETLTIEEFAALAREIKDYLKDCS
SIO_010081: TOCE_RS00160
subclass of: SO_0000673
so part of: TOCE_RS00160
location: 29265..30113
location: region:29265-30113:1
so has part: feature:29265-30113:1:exon

WP_013274880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29265-30113:1:exon

TOCE_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00165
old locus tag: Toce_0032
so part of: sequence
location: 30205..30675
location: region:30205-30675:1
so has part: feature:30205-30675:1:exon
subclass of: SO_0000010

position:30205:1
position: 30205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30675:1
position: 30675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30205-30675:1:exon

TOCE_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00165
old locus tag: Toce_0032
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777212.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease H-like YkuK family protein
translation: MYFISPTKGRIPIEEVVKDIIAFMEEEPNAPYKLIIGTDSQARDNVCFVTAIIVHRVGKGARYYYQRKIMPQVKSLRHKVYTETSLSLEAVSLLKGELSKTSYRNMDVEIHVDIGQNGDTKELIREVVGWVMSSGYKVKIKPQAFGATKVADKYTK
SIO_010081: TOCE_RS00165
subclass of: SO_0000673
so part of: TOCE_RS00165
location: 30205..30675
location: region:30205-30675:1
so has part: feature:30205-30675:1:exon

WP_013274881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30205-30675:1:exon

TOCE_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00170
old locus tag: Toce_0033
so part of: sequence
location: complement(30668..31486)
location: region:30668-31486:-1
so has part: feature:30668-31486:-1:exon
subclass of: SO_0000010

position:30668:-1
position: 30668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31486:-1
position: 31486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30668-31486:-1:exon

TOCE_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00170
old locus tag: Toce_0033
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777213.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MNIAVVPAKNEQGRIGKVLDNLSDTAVDRIVVVLNGSRDGTLKEIKTQKLPKVEVLSFREPLGYDIPRAVGVYYALKKGAECVVFVDGDMTGNLLPAVNRLVDAVVSEKVDLAMTRIQPEMISENELARELYLFRRVLNERLGLYKKVGVAIPSHGPCAVSRRLMEKADIRDFAVPPVILAFAVKNDLRVEAPVEMHSRELGSKVRGFSHAKKIADTIIGDILEALAFFEGKPRKRILLQKEYQGYNPRRRFDLLERFIALYGRNFDFNPST
SIO_010081: TOCE_RS00170
subclass of: SO_0000673
so part of: TOCE_RS00170
location: complement(30668..31486)
location: region:30668-31486:-1
so has part: feature:30668-31486:-1:exon

WP_013274882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30668-31486:-1:exon

TOCE_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: yabG
locus tag: TOCE_RS00175
old locus tag: Toce_0034
so part of: sequence
location: 31588..32445
location: region:31588-32445:1
so has part: feature:31588-32445:1:exon
subclass of: SO_0000010

position:31588:1
position: 31588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32445:1
position: 32445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31588-32445:1:exon

TOCE_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: yabG
locus tag: TOCE_RS00175
old locus tag: Toce_0034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777214.1
GO function: GO:0008233 - peptidase activity [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sporulation peptidase YabG
translation: MAMIKVGDVVARLSYGKDIYFKVVDIREEQHIALLRGINVRIFADAPLEDLVFPSASEIREYKKEYIRKYNECLERIFYRREVEMNRLKRGDSDENGFFYIPGKVLHVDGDEEYLELCLTTYRQLGIEAHGVKLSEKDQPGKIRKLVMEYNPDILVITGHDGLLKNRSDFNNVEAYRNSKFFIEAVKEARKYEPSLDDLVIFAGACQSHYEGLIKAGANFASSPHRVFIHALDPVFVIEKIAFTPIDKIVSAKDVIEATITGIKGIGGIGTRGKLREGLPRSPYD
SIO_010081: TOCE_RS00175
subclass of: SO_0000673
so part of: TOCE_RS00175
location: 31588..32445
location: region:31588-32445:1
so has part: feature:31588-32445:1:exon

WP_013274883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31588-32445:1:exon

TOCE_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: spoIID
locus tag: TOCE_RS00180
old locus tag: Toce_0035
so part of: sequence
location: 32462..33901
location: region:32462-33901:1
so has part: feature:32462-33901:1:exon
subclass of: SO_0000010

position:32462:1
position: 32462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33901:1
position: 33901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32462-33901:1:exon

TOCE_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: spoIID
locus tag: TOCE_RS00180
old locus tag: Toce_0035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777215.1
GO process: GO:0030436 - asexual sporulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stage II sporulation protein D
translation: MAEECDGLKVRVFDVEKKRHLVLEMEEYVAGAVAYAMPAEFPPEALKAQAICARTIAVRRMRAFGGTGCRRYPDYDLCSDPLHCQGFLDEDDRRKLWGARFGEYMQRIKKAVEDTFGIILTFNGKPIEAVYHRACGGYTEDSESVWGNRVAYLRRVECNYCKDSPYWRVTRTFSIRQLKKRLGIKLDENCFDKRELPGLVDEVQSTPSGRVKRMRIGDRVFDGTDVKKLLDLPSTRFGWKVSSITFEALGTGHGLGMCQCGAMGMALLGFPFDEILKFYFTGVELSDVVKPTAAKPLSGKVVAVDPGRGGEADHCGPMGLSEGYVNLEIARVLAAMLVREGAQVVMTREKDEYKSLSERVKIINQNKADIAMSIHQSFHSDESMGGTEVFYFPGDKKARMLSLCVHRELISALNLTDHGVKEADLYILRETNIPCIVVNVAHLSNPEEERLLSEREFREKAARAILSGIKSYYQGLLKE
SIO_010081: TOCE_RS00180
subclass of: SO_0000673
so part of: TOCE_RS00180
location: 32462..33901
location: region:32462-33901:1
so has part: feature:32462-33901:1:exon

WP_013274884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32462-33901:1:exon

TOCE_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00185
old locus tag: Toce_0036
so part of: sequence
location: 34039..34302
location: region:34039-34302:1
so has part: feature:34039-34302:1:exon
subclass of: SO_0000010

position:34039:1
position: 34039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34302:1
position: 34302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34039-34302:1:exon

TOCE_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00185
old locus tag: Toce_0036
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777216.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Veg family protein
translation: MATENTLLRIRKSIEPYVGQKVRVRANRGRKKTFEKEGILEKVYPSIFVIRVEESPDFVRRISYSYSDILTETVQLTLCQKEKSGSK
SIO_010081: TOCE_RS00185
subclass of: SO_0000673
so part of: TOCE_RS00185
location: 34039..34302
location: region:34039-34302:1
so has part: feature:34039-34302:1:exon

WP_013274885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34039-34302:1:exon

TOCE_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00190
old locus tag: Toce_0037
so part of: sequence
location: 34403..35407
location: region:34403-35407:1
so has part: feature:34403-35407:1:exon
subclass of: SO_0000010

position:34403:1
position: 34403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35407:1
position: 35407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34403-35407:1:exon

TOCE_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00190
old locus tag: Toce_0037
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777217.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRAERILRRYERKLLRLENVVGTGLGYKIIEGRITNEPAVIVLVRKKKPERELPASQVVPKKLDEVYTDIIEVGDVRLLTARTQKTRPAMPGMSIGHYKITAGTFGAVVRDQITGEPLILSNNHVLANASNGRDGRAAVGDPIMQPGPYDGGGPEDVIAHLYRFIPVEKDVTHSRCPIARRGENLLNFFVRMIRPDYRVAFMKHRAAYNLVDAAVAKPINPDYISPEILDLGEIRGIAEPRIGMTLVKSGRTSGVSKSEVKALNVKIRVMMGAGEEATFYDQILTGPMAQPGDSGSLVLNENMEAVGLLFAGSDLVTLINPISAVLKLLKVTF
SIO_010081: TOCE_RS00190
subclass of: SO_0000673
so part of: TOCE_RS00190
location: 34403..35407
location: region:34403-35407:1
so has part: feature:34403-35407:1:exon

WP_013274886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34403-35407:1:exon

TOCE_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00195
old locus tag: Toce_0038
so part of: sequence
location: 35590..36270
location: region:35590-36270:1
so has part: feature:35590-36270:1:exon
subclass of: SO_0000010

position:35590:1
position: 35590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36270:1
position: 36270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35590-36270:1:exon

TOCE_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00195
old locus tag: Toce_0038
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777218.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CAP domain-containing protein
translation: MRKPLRNLIVLTLLAALVLLPGVASAAGWITVNLNYNGKVQTFRIPIEGLEGGTYKCNITIPKLPGQTLSKPAPQPAPQPKPQPAPGDDKPITPPVKGLTADEQQMLNLVNAERVKAGLKPLEIDMRLVDISRKKSKDMIENNYFGHTSPTYGTPFDALKAAGISYRYAGENIAGAPTVQRAHEGLMNSPGHRANILNPNYNRIGIGIVDGGPYGKMFTQTFIGTN
SIO_010081: TOCE_RS00195
subclass of: SO_0000673
so part of: TOCE_RS00195
location: 35590..36270
location: region:35590-36270:1
so has part: feature:35590-36270:1:exon

WP_013274887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35590-36270:1:exon

TOCE_RS12205
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12205
old locus tag: Toce_0039
so part of: sequence
location: 36470..36889
location: region:36470-36889:1
so has part: feature:36470-36889:1:exon
subclass of: SO_0000010

position:36470:1
position: 36470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36889:1
position: 36889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36470-36889:1:exon

TOCE_RS12205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12205
old locus tag: Toce_0039
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLLGLTVGLGVAIVVLYFFARKYFIGKKGCIKEPPKEKKKPVKPLPAEENPVGVPEPPEGQKPEQSEDQKTEQPEDQKPEQPEGQKPEQAEGQKPEQPESQEPEQPEDKKAEQEQPVEPVPSDKAKDGTDTPEAHPLP
SIO_010081: TOCE_RS12205
subclass of: SO_0000673
so part of: TOCE_RS12205
location: 36470..36889
location: region:36470-36889:1
so has part: feature:36470-36889:1:exon

WP_013274888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36470-36889:1:exon

TOCE_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00205
old locus tag: Toce_0040
pseudo: true
so part of: sequence
location: 37030..>38322
location: region:37030-38322:1
so has part: feature:37030-38322:1:exon
subclass of: SO_0000010

position:37030:1
position: 37030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38322:1
position: 38322
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37030-38322:1:exon

TOCE_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00205
old locus tag: Toce_0040
inference: COORDINATES: protein motif:HMM:NF024085.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF3794 domain-containing protein
SIO_010081: TOCE_RS00205
subclass of: SO_0000673
so part of: TOCE_RS00205
location: 37030..>38322
location: region:37030-38322:1
so has part: feature:37030-38322:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37030-38322:1:exon

TOCE_RS12705
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12705
pseudo: true
so part of: sequence
location: <38503..>38634
location: region:38503-38634:1
so has part: feature:38503-38634:1:exon
subclass of: SO_0000010

position:38503:1
position: 38503
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:38634:1
position: 38634
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38503-38634:1:exon

TOCE_RS12705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014893541.1
GO function: GO:0097367 - carbohydrate derivative binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: LysM domain-containing protein
SIO_010081: TOCE_RS12705
subclass of: SO_0000673
so part of: TOCE_RS12705
location: <38503..>38634
location: region:38503-38634:1
so has part: feature:38503-38634:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38503-38634:1:exon

TOCE_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00210
old locus tag: Toce_0041
so part of: sequence
location: 38728..39570
location: region:38728-39570:1
so has part: feature:38728-39570:1:exon
subclass of: SO_0000010

position:38728:1
position: 38728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39570:1
position: 39570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38728-39570:1:exon

TOCE_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00210
old locus tag: Toce_0041
EC number: 3.4.15.6
inference: COORDINATES: protein motif:HMM:TIGR02069.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
GO process: GO:0044265 - cellular macromolecule catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cyanophycinase
translation: MGEKVKGFLIIIGGAEDRKGECKILKKFINISGGKDARITVITAAAQDPQQVGAEYIEIFSELGAHDVQALNIESRKEADREEIADRILDSTGIFFTGGDQLRITSLLGGTRVYNALHRAYREGVIVAGTSAGASAMSDTMIIGGSGDQAPKGSTVSMAPGLGLLEEVVVDQHFAQRGRMSRLLLAVAQNPYILGVGIDEDTAILVSPDGKFRVIGSNTVTVVDGSIVDFTNVSELESGEPLAMFNAKIHILSPGFGFDMKNRKPLKGEATGTYIRSGNG
SIO_010081: TOCE_RS00210
subclass of: SO_0000673
so part of: TOCE_RS00210
location: 38728..39570
location: region:38728-39570:1
so has part: feature:38728-39570:1:exon

WP_013274890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38728-39570:1:exon

TOCE_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cphA
locus tag: TOCE_RS00215
old locus tag: Toce_0042
so part of: sequence
location: 39616..42243
location: region:39616-42243:1
so has part: feature:39616-42243:1:exon
subclass of: SO_0000010

position:39616:1
position: 39616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42243:1
position: 42243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39616-42243:1:exon

TOCE_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cphA
locus tag: TOCE_RS00215
old locus tag: Toce_0042
EC number: 6.3.2.29
EC number: 6.3.2.30
inference: COORDINATES: protein motif:HMM:NF010623.0
GO function: GO:0016874 - ligase activity [Evidence IEA]
GO process: GO:0051235 - maintenance of location [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cyanophycin synthetase
translation: MDIVDIKAIEGPNIYSPKPVIRMLVDVGEYEDIPTKDIEGFNRRLLEKLPGLAMHHCCFEEPGGFLMRLQEGTYIPHVIEHVALEILNLLGQDVKFGRARRLEKTTYNIVFSYKGKFAALEAGRLAFRLVNALARGSDLDLEGELERIKRYCAEMELGPSTAAIEREAKSRGIPVTRVGDESLLILGYGAYQKRVKATITGETSCVAVDIACDKTLTKKMLTLAGIPVPEGTVVCSEEEAVRAARELGFPVVIKPVDGNQGNGVSLNLENEAEVAEAFRLAAGYSPRVIVEKYIRGRHYRVLVVGGKFVCAAERIPAHVVGDGIRSIRELIEEVNRDPVRGEKHEKPLTKIKVDPVVLRVLARRGYTLDTVPGKGELVFLRENGNLSTGGTAVDVTDLVCPENRMLAERAAAMIGLDVAGIDITTEDISIPVEKSGGAVIEVNAAPGIRMHLYPSMGESRPAARAIVDMLFPQEPPRFPLVAVTGTNGKTTTVRMVANILSAHGLKVGMTCTDGVYVGSMCIRRGDCSGPESAKMVLLDPSVEAAVLEIARGGLIRGGLAYEYADVGIITNITGDHLGQDGVNTLEDLMFVKSLVAEQVKPEGYAVLNADDITSVEVKKRVKSRVIFFSLQEDNLVLRKHIAEGGRGVYVKDGFIFFQEGDKSVSLMKVADIPAAMNGRARHNVQNALAAAAAGWALDVPAETIRRALSDFRCDESTNPGRLNIISEGNIRIILDYGHNPAALEAIIGTARSMNPARMVGVIASPGDRRDEAIVKLGQVAGRGFQRLIIKEDEDPRGRKPGEVASLLLEGALSAGLKKDQIDVILKEEEAITFALENAQDGDLIVIFYEHYDSAIEAIRESLKRRRKTPAAARIV
SIO_010081: TOCE_RS00215
subclass of: SO_0000673
so part of: TOCE_RS00215
location: 39616..42243
location: region:39616-42243:1
so has part: feature:39616-42243:1:exon

WP_013274891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39616-42243:1:exon

TOCE_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: ispE
locus tag: TOCE_RS00220
old locus tag: Toce_0043
so part of: sequence
location: 42323..43177
location: region:42323-43177:1
so has part: feature:42323-43177:1:exon
subclass of: SO_0000010

position:42323:1
position: 42323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43177:1
position: 43177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42323-43177:1:exon

TOCE_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: ispE
locus tag: TOCE_RS00220
old locus tag: Toce_0043
EC number: 2.7.1.148
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777221.1
GO function: GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO process: GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
translation: MDKVELEARAKINLTLDVLYRRSDGYHEVEMIMQTISLKDRIVITLIPEKGIRIVNSCRELPDGEDNLAFKAAKLMMDEYGLDAGVEIKLFKEIPIAAGLAGGSADAAAVLEGLNELFGLGLPKEALMRLGEMIGADVPFCTMGGTALARGKGEKLTPLPPVPPMNLLLVKPPFAVSTREVYNRLKIDSITKRPDTEAVIRSIEKGDVDGISRGLCNVLEEVTFAQHPELGIIKAWLVERGAMGSLMSGSGPTVYGIFENRRDAERAAASMPLSGCRIFISQVD
SIO_010081: TOCE_RS00220
subclass of: SO_0000673
so part of: TOCE_RS00220
location: 42323..43177
location: region:42323-43177:1
so has part: feature:42323-43177:1:exon

WP_013274892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42323-43177:1:exon

TOCE_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00225
old locus tag: Toce_0044
so part of: sequence
location: 43190..43891
location: region:43190-43891:1
so has part: feature:43190-43891:1:exon
subclass of: SO_0000010

position:43190:1
position: 43190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43891:1
position: 43891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43190-43891:1:exon

TOCE_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00225
old locus tag: Toce_0044
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777222.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MAGKLKSIRLDNYKPLREIVFEALREAIITGELKPGERLMEVQLAEEMGVSRTPVREAIRKLELEGLVVMIPRRGAYVSGLSLKDAADVFEVRQSLEGLAAALAAERITDEELESLERILVEISEAAEKDDVDTVIKKDSEFHQILFKATRNDRLVQIINNLKEQIDRFRLQSFTNRARVRSLLEEHKKIVEAISDRNVELAKKLAEEHIERVENNVMNILRKQMDFEEELSC
SIO_010081: TOCE_RS00225
subclass of: SO_0000673
so part of: TOCE_RS00225
location: 43190..43891
location: region:43190-43891:1
so has part: feature:43190-43891:1:exon

WP_013274893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43190-43891:1:exon

TOCE_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00230
old locus tag: Toce_0045
so part of: sequence
location: 43885..44643
location: region:43885-44643:1
so has part: feature:43885-44643:1:exon
subclass of: SO_0000010

position:43885:1
position: 43885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44643:1
position: 44643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43885-44643:1:exon

TOCE_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00230
old locus tag: Toce_0045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777223.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase family protein
translation: MLKALVLAGGDGDEKLQESEGTKALVRINGREMILYILDALKKLDYIEKIAIVGPKEKLSSIKVGPNVVVVEESDSIVGNILRGLELFSDDDEILIMTCDIPMVTAEAIDDFVKKAKGLNADFCYPIIRKEDTEKKYPGIKRTYARVREGTFTGGNVALVKVGSAKRCIKKAEEFFTYRKNPLKLASILGFSVVLKFLLGKLSIPELEKRVYDIFGIKARAVISDFPEIGNDVDKKSDLELVREVLGREVVQ
SIO_010081: TOCE_RS00230
subclass of: SO_0000673
so part of: TOCE_RS00230
location: 43885..44643
location: region:43885-44643:1
so has part: feature:43885-44643:1:exon

WP_013274894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43885-44643:1:exon

TOCE_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: purR
locus tag: TOCE_RS00235
old locus tag: Toce_0046
so part of: sequence
location: 44640..45464
location: region:44640-45464:1
so has part: feature:44640-45464:1:exon
subclass of: SO_0000010

position:44640:1
position: 44640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45464:1
position: 45464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44640-45464:1:exon

TOCE_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: purR
locus tag: TOCE_RS00235
old locus tag: Toce_0046
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777224.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0045982 - negative regulation of purine nucleobase metabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pur operon repressor
translation: MRRSKRLVLLSKFLSENPNRIFTLKYFGDKYDAAKSSISEDLNIIKDAFHEAGEGTLETIPGAAGGVRFRIKRPAQAIEKFVLELSSILSDRSRIIPGGYLYMTDVIFSPEYSSKIGEIFAQLFVDEEPTCVLTVETKGIPLALMTARALGVPLVVARRDSRVTEGPSVNISYISGSSRRIQNMALPTRALSEKARVLIVDDFMKGGGTARGMSELVREFRAEVVGVAVLVATAYPEEKLVKNYTSLLVLEKIDAERGEVRLKPVKIPIKKEGV
SIO_010081: TOCE_RS00235
subclass of: SO_0000673
so part of: TOCE_RS00235
location: 44640..45464
location: region:44640-45464:1
so has part: feature:44640-45464:1:exon

WP_013274895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44640-45464:1:exon

TOCE_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: spoVG
locus tag: TOCE_RS00240
old locus tag: Toce_0047
so part of: sequence
location: 45516..45776
location: region:45516-45776:1
so has part: feature:45516-45776:1:exon
subclass of: SO_0000010

position:45516:1
position: 45516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45776:1
position: 45776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45516-45776:1:exon

TOCE_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: spoVG
locus tag: TOCE_RS00240
old locus tag: Toce_0047
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777225.1
GO process: GO:0030435 - sporulation resulting in formation of a cellular spore [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septation regulator SpoVG
translation: MEVTDVRIKRVENEGRMKAIVSVTFDDEFVVHDIRIIEGDKGLFIAMPSRKTSSGHFRDVAHPINSAARAKIEEAVLKQYNGEDSK
SIO_010081: TOCE_RS00240
subclass of: SO_0000673
so part of: TOCE_RS00240
location: 45516..45776
location: region:45516-45776:1
so has part: feature:45516-45776:1:exon

WP_013274896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45516-45776:1:exon

TOCE_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: glmU
locus tag: TOCE_RS00245
old locus tag: Toce_0048
so part of: sequence
location: 45896..47296
location: region:45896-47296:1
so has part: feature:45896-47296:1:exon
subclass of: SO_0000010

position:45896:1
position: 45896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47296:1
position: 47296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45896-47296:1:exon

TOCE_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: glmU
locus tag: TOCE_RS00245
old locus tag: Toce_0048
EC number: 2.3.1.157
EC number: 2.7.7.23
inference: COORDINATES: protein motif:HMM:NF010934.0
GO function: GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0006048 - UDP-N-acetylglucosamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
translation: MDFTAVILAAGEGTRMKSNTPKVLHKVCGIPMLGHVVSAARGAGAKRIVVVVGRGSDEVKRAFEGEEVEFVLQAEQKGTGHALKQAQEAVKGEAAILVLYGDMPLVKSETLRAMADFHWKNGATATVMTARVKDPTGYGRIIRKGLEVLAIREEKDATPEEKAIDEINSGIYFFQAEKVFDALNQVNNNNKQGEYYLTDVIEILNAGKEKVLAYEVQDPDEVQGVNDRFQLSVAQAIMQRRIIHRLMAQGVTFLSPETCVVDAGVKIGRDTVIYPGVFLEGDTWIGEGCTIIGTSRIIDSRIGNGVEITMCHIQESVVEDGVKIGPFANLRPGSHVMAGAKIGDFVEVKNSRVGEGSKIPHLAYVGDAEIGRRVNIGAGVIFVNYDGFEKHRTVVEDDAFIGCNSNLIAPVTIGAGSYVAAGSTINMDVEKGALAIARERQVNKPEWVEKRRRKREGGDKTDGKQA
SIO_010081: TOCE_RS00245
subclass of: SO_0000673
so part of: TOCE_RS00245
location: 45896..47296
location: region:45896-47296:1
so has part: feature:45896-47296:1:exon

WP_013274897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45896-47296:1:exon

TOCE_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00250
old locus tag: Toce_0049
so part of: sequence
location: 47280..48218
location: region:47280-48218:1
so has part: feature:47280-48218:1:exon
subclass of: SO_0000010

position:47280:1
position: 47280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48218:1
position: 48218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47280-48218:1:exon

TOCE_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00250
old locus tag: Toce_0049
EC number: 2.7.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777227.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO process: GO:0006015 - 5-phosphoribose 1-diphosphate biosynthetic process [Evidence IEA]; GO:0009165 - nucleotide biosynthetic process [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]; GO:0009156 - ribonucleoside monophosphate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose-phosphate pyrophosphokinase
translation: MENRLEIFTGNANPELAREIARNLGIMVGDAVVNTFSDGEIQVKINESVRGADVFVIQPLSYPVNDHLMELLIMLDALKRASAWRITAVMPYYGYARQDRKIRARDPITAKLVADLISTAGAHRVLTMDLHAGQIQGFFNFPVDHLMAVPILADYFRKKELEDPVVVSPDLGGVTRARELANRIGASIAIIDKRRPEPNKAEVMNIIGDIRNKTVIMIDDMIDTAGTITLGAQALLDKGAKEVYACCTHPVLSGPAIERLNASPIKEVVVTNTIPLRDHQKIEKITVLSVAPLFAEAIRRIHLHQSVSTLFD
SIO_010081: TOCE_RS00250
subclass of: SO_0000673
so part of: TOCE_RS00250
location: 47280..48218
location: region:47280-48218:1
so has part: feature:47280-48218:1:exon

WP_013274898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47280-48218:1:exon

TOCE_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00255
old locus tag: Toce_0050
so part of: sequence
location: 48282..48914
location: region:48282-48914:1
so has part: feature:48282-48914:1:exon
subclass of: SO_0000010

position:48282:1
position: 48282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48914:1
position: 48914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48282-48914:1:exon

TOCE_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00255
old locus tag: Toce_0050
inference: COORDINATES: protein motif:HMM:NF004133.0
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L25/general stress protein Ctc
translation: MAQVTLTAEERKLAGKGTLNELRRNGKVPAVFYGKNIENRTIAVDAKELHKLLKTHGEGVLIDLVLGGEKHTVIIKEIQRDALKGDITHVDFFRVSMTEKIEVDLPIVLKGEPEGVKAGGVLQHQLHELTIEALPADIPEQIEVDISHLQIGDVLMVKDIKLSDKITVIDDPGEVVVTVLAPTSGEELESTAGETNEPEVVAKGKEKEGE
SIO_010081: TOCE_RS00255
subclass of: SO_0000673
so part of: TOCE_RS00255
location: 48282..48914
location: region:48282-48914:1
so has part: feature:48282-48914:1:exon

WP_013274899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48282-48914:1:exon

TOCE_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: pth
locus tag: TOCE_RS00260
old locus tag: Toce_0051
so part of: sequence
location: 48954..49526
location: region:48954-49526:1
so has part: feature:48954-49526:1:exon
subclass of: SO_0000010

position:48954:1
position: 48954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49526:1
position: 49526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48954-49526:1:exon

TOCE_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: pth
locus tag: TOCE_RS00260
old locus tag: Toce_0051
EC number: 3.1.1.29
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777229.1
GO function: GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminoacyl-tRNA hydrolase
translation: MRILFLIVGLGNPGREYEETRHNVGFMVLDSLAAELGIKVDKVKFKGLLGEGVYEGKKLLLLKPMTYMNNSGQSVVEAVKFYKIPPENLVVIYDDMDLPVGRLRVRGSGSSGGQKGMESIIYHIATEGFPRIRIGIGRPKGDVINHVLGRFDKEERKKIDAVIDAAVGAALTIVQHGVQEAMNRYNGFEA
SIO_010081: TOCE_RS00260
subclass of: SO_0000673
so part of: TOCE_RS00260
location: 48954..49526
location: region:48954-49526:1
so has part: feature:48954-49526:1:exon

WP_245523129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48954-49526:1:exon

TOCE_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00265
old locus tag: Toce_0052
so part of: sequence
location: 49612..49899
location: region:49612-49899:1
so has part: feature:49612-49899:1:exon
subclass of: SO_0000010

position:49612:1
position: 49612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49899:1
position: 49899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49612-49899:1:exon

TOCE_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00265
old locus tag: Toce_0052
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKLRSFLLGVGAAALAYGLLTRRKRAVAEIETDAEGGIRVRPIKRVELVTPGLGQAYRGVNPEEQGLVRLSDELSNLKDAITRLQSEIEELKKK
SIO_010081: TOCE_RS00265
subclass of: SO_0000673
so part of: TOCE_RS00265
location: 49612..49899
location: region:49612-49899:1
so has part: feature:49612-49899:1:exon

WP_013274901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49612-49899:1:exon

TOCE_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00270
so part of: sequence
location: 50083..51447
location: region:50083-51447:1
so has part: feature:50083-51447:1:exon
subclass of: SO_0000010

position:50083:1
position: 50083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51447:1
position: 51447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50083-51447:1:exon

TOCE_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00270
EC number: 2.7.1.197
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015295748.1
GO function: GO:0022872 - protein-N(PI)-phosphohistidine-mannitol phosphotransferase system transmembrane transporter activity [Evidence IEA]
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS mannitol transporter subunit IICBA
translation: MRAKIQAFGRFLSGMVMPNIGAFIAWGLITAFFIPTGWTPNEHLGKLVNPMIVYLLPLLIGYTGGRMVHGVRGGVVGAIATMGVIVGADIPMFMGAMIMGPLGGYAIKKFDEAVQDKIPPGFEMLVNNFSAGIIGMIVTLLAYLAVGPVVQGLNKVLAAGVQAIVNAGLLPLASIFIEPGKILFLNNAINHGILAPLGVAQVAEQGKSIFFLLETNPGPGLGVLLAYWLVGRGTAKQSAPGAIIIHFFGGIHEIYFPYVLMNPILIVAVILGGFTGVFTFTVLGAGLVATPSPGSIFAEMAMAPKGGLLPVLAGITLSAVVSFLVSSVLLRRFAQEEEDFQAAQQLVNELKGGQAAGALKNRPAVRKIVFACDGGMGSSAMGASVLRRKIREAGLDVEVVHAAINEIPGDADIVISHRELTARAKAEAPNAEHISIEAFVNNPVYDEIVERLKK
SIO_010081: TOCE_RS00270
subclass of: SO_0000673
so part of: TOCE_RS00270
location: 50083..51447
location: region:50083-51447:1
so has part: feature:50083-51447:1:exon

WP_041423800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50083-51447:1:exon

TOCE_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00275
old locus tag: Toce_0054
so part of: sequence
location: 51517..53574
location: region:51517-53574:1
so has part: feature:51517-53574:1:exon
subclass of: SO_0000010

position:51517:1
position: 51517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53574:1
position: 53574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51517-53574:1:exon

TOCE_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00275
old locus tag: Toce_0054
inference: COORDINATES: protein motif:HMM:NF012579.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BglG family transcription antiterminator
translation: MDLKRREREILKILLEGPTTTERIASLLGVSRRTVLRGLPELSEKLKSLGINLVKKAGTGVSLEGRKDSMEKLECLIERPSKRVEMTPDERQQLIILSLLEQKGPRKLYTFAREFNVTDATISNDLDKIEEILSRYGIKLLRRPGLGVWIEGHEKNIRALVTELFYENFDEAQLVRLIKDNLRCEIISGRGVRAQVKDRLLGLIDRNLVEEIEHALKEVVEESGLHLADSAYAGLLVHIALALERLKSGEIITMDEPFLANFKNTKEFDLARRLGSKLEAAFGISIPEGELGYITMHLLGAKLRMGDNLDELFLLDHRDAAQAAREILKEAGRELKKDLLEDGRVLEDLALHLKPALVRLKLGMEIRNPLLSQIKESYPRLMQVAGRAARLLEKRFGVTVPESEIGYIAMHIGAALEHGGGAERAGVVLVCPSGIGSARMLASRIKKELPELEVLEVVSALDLEKALEKHPDAEAVISTVPMEVSKAPVLLVSPLLNDDDVEKIRAYFRARRLKERESSGVVTGRGRPEERRELVFEILEEFVIEEVDADNLEELLDVLVEKIRKKPGITSAGRIKQDLYSREIKAGTAVPGLGLSVLHARTGGVEKPFLGLFRLKKSLKMKNMDGDTEEVKACLVMLLSPRPSPGEIEVMGRISAGLVEDPTLAGVLKSGSGEDVIKALLRILK
SIO_010081: TOCE_RS00275
subclass of: SO_0000673
so part of: TOCE_RS00275
location: 51517..53574
location: region:51517-53574:1
so has part: feature:51517-53574:1:exon

WP_187286573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51517-53574:1:exon

TOCE_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00280
so part of: sequence
location: 53590..54072
location: region:53590-54072:1
so has part: feature:53590-54072:1:exon
subclass of: SO_0000010

position:53590:1
position: 53590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54072:1
position: 54072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53590-54072:1:exon

TOCE_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00280
inference: COORDINATES: protein motif:HMM:NF012579.2
GO component: GO:1902495 - transmembrane transporter complex [Evidence IEA]
GO function: GO:0016301 - kinase activity [Evidence IEA]
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS sugar transporter subunit IIA
translation: MAFNWFKKRKENEKKEELLTEGSIVIGARARDKYEAIEIVGGLLVKEGRVEPAYIDAMKQREDMLTTYIGNGIAIPHGVGDAKEKIKKSGLAVAQFPEGVDFGEGDKAYIVIGIAAKGEEHLDILANIASACEDEKRVKKLVESKDPREILRLLTEGFAR
SIO_010081: TOCE_RS00280
subclass of: SO_0000673
so part of: TOCE_RS00280
location: 53590..54072
location: region:53590-54072:1
so has part: feature:53590-54072:1:exon

WP_049817866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53590-54072:1:exon

TOCE_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00285
old locus tag: Toce_0055
so part of: sequence
location: 54069..55202
location: region:54069-55202:1
so has part: feature:54069-55202:1:exon
subclass of: SO_0000010

position:54069:1
position: 54069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55202:1
position: 55202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54069-55202:1:exon

TOCE_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00285
old locus tag: Toce_0055
EC number: 1.1.1.17
inference: COORDINATES: protein motif:HMM:NF002652.0
GO function: GO:0008926 - mannitol-1-phosphate 5-dehydrogenase activity [Evidence IEA]
GO process: GO:0019594 - mannitol metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mannitol-1-phosphate 5-dehydrogenase
translation: MKKAVHFGAGNIGRGFIGFLLSRAGYRVVFVDINAELIETLNEKGFYRVMEKGEDEKVYRVEGVTGILSTEEQKVAEAVAHAHIVTTAVGPGVLGSIAPLIAAGISRRLQHSPEPLNVIACENMVGASTFLKEKVMEHLSPSEREKLEKTVGFPDAAVDRIVPPQSGTDPLGVAVEPYFEWVVDIGGFKGAVPEIPGMKAVENLQAYVERKIYTLNTGHAVAAYLGYEKGCTTIREALQNPQILEAVKGAMAESGVYLRACFGFSEEEHEVYIEKTLQRFLNPALEDPVVRVGRNPVRKLGPKDRLVYPSVRALELGVKPVNLARGIAAALKFDYEEDQEARKLQQMLREQGIDVVLNKVCGIPDESPLRDIIKATL
SIO_010081: TOCE_RS00285
subclass of: SO_0000673
so part of: TOCE_RS00285
location: 54069..55202
location: region:54069-55202:1
so has part: feature:54069-55202:1:exon

WP_013274903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54069-55202:1:exon

TOCE_RS11800
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS11800
so part of: sequence
location: 55444..55626
location: region:55444-55626:1
so has part: feature:55444-55626:1:exon
subclass of: SO_0000010

position:55444:1
position: 55444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55626:1
position: 55626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55444-55626:1:exon

TOCE_RS11800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS11800
inference: COORDINATES: protein motif:HMM:NF016430.2
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma factor
translation: MSNEILEKLFASKMKIIYKYLVKIGCSHDDAEDIVQDTLLQAIIHLEVLDPDKIVSWLFK
SIO_010081: TOCE_RS11800
subclass of: SO_0000673
so part of: TOCE_RS11800
location: 55444..55626
location: region:55444-55626:1
so has part: feature:55444-55626:1:exon

WP_083768445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55444-55626:1:exon

TOCE_RS11805
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS11805
pseudo: true
so part of: sequence
location: <55644..55958
location: region:55644-55958:1
so has part: feature:55644-55958:1:exon
subclass of: SO_0000010

position:55644:1
position: 55644
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:55958:1
position: 55958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55644-55958:1:exon

TOCE_RS11805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS11805
inference: COORDINATES: protein motif:HMM:TIGR02937.1
GO function: GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: RNA polymerase sigma factor
SIO_010081: TOCE_RS11805
subclass of: SO_0000673
so part of: TOCE_RS11805
location: <55644..55958
location: region:55644-55958:1
so has part: feature:55644-55958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55644-55958:1:exon

TOCE_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00295
so part of: sequence
location: 55948..56274
location: region:55948-56274:1
so has part: feature:55948-56274:1:exon
subclass of: SO_0000010

position:55948:1
position: 55948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56274:1
position: 56274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55948-56274:1:exon

TOCE_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00295
inference: COORDINATES: protein motif:HMM:NF025172.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma factor regulator N-terminal domain-containing protein
translation: MNDEKKLADIFDFNNSKIKKVLQKAKVLTLLRTVAVSLFVFLLLSAAIVIINAVMLNRIGNNELTNELIFDLVARPNTYMSQYQNNDGFLTGELEYVTHRIVGQQAGI
SIO_010081: TOCE_RS00295
subclass of: SO_0000673
so part of: TOCE_RS00295
location: 55948..56274
location: region:55948-56274:1
so has part: feature:55948-56274:1:exon

WP_041423801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55948-56274:1:exon

TOCE_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00300
old locus tag: Toce_0057
so part of: sequence
location: 56234..56932
location: region:56234-56932:1
so has part: feature:56234-56932:1:exon
subclass of: SO_0000010

position:56234:1
position: 56234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56932:1
position: 56932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56234-56932:1:exon

TOCE_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00300
old locus tag: Toce_0057
inference: COORDINATES: protein motif:HMM:NF025164.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anti-sigma factor C-terminal domain-containing protein
translation: MLLTGLSGNRPVYNGTYTIKYEIIPITPGISGHSERGQLIRVEAEDQYNYYNRVGNREMKFYHPYIEYKTYENDLALLEEIGEDKYLEMALSFDRDYSLEEVQAMLPAEVKPVWYWVNTYNNEDLNRKKNGETIFFANEVYGMKGANSDGTTIKDPRNSFISAINSGLKRKSRYQLQFRRLHERLSNDKGEITKDNIRVIGVVVTGDTASMKLLRGKSYIKASSLGIVVDKF
SIO_010081: TOCE_RS00300
subclass of: SO_0000673
so part of: TOCE_RS00300
location: 56234..56932
location: region:56234-56932:1
so has part: feature:56234-56932:1:exon

WP_083768447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56234-56932:1:exon

TOCE_RS12710
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12710
so part of: sequence
location: 57025..57309
location: region:57025-57309:1
so has part: feature:57025-57309:1:exon
subclass of: SO_0000010

position:57025:1
position: 57025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57309:1
position: 57309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57025-57309:1:exon

TOCE_RS12710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_263870384.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl except: (pos:57121..57123,aa:Sec)
transl table: 11
product: CC/Se motif family (seleno)protein
translation: MIKIEIDEKAKDFIREKNSDAITVKLERFGGGUAGCRYLPAVYVGAPSDENEYQVQEVDGIKVYISPFVDAQKGLRIYLSGFGMFKNLAVATPY
SIO_010081: TOCE_RS12710
subclass of: SO_0000673
so part of: TOCE_RS12710
location: 57025..57309
location: region:57025-57309:1
so has part: feature:57025-57309:1:exon

WP_281054639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57025-57309:1:exon

TOCE_RS12520
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12520
so part of: sequence
location: complement(57306..57680)
location: region:57306-57680:-1
so has part: feature:57306-57680:-1:exon
subclass of: SO_0000010

position:57306:-1
position: 57306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57680:-1
position: 57680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57306-57680:-1:exon

TOCE_RS12520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12520
inference: COORDINATES: protein motif:HMM:NF024252.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MVATSHVGYKIKKIRQERGLTQVELAKKAGVSTGLIGQIESGRVEPSLKTLEKIAHALSLSPCYFVTDDDEIASLLRPMNPELKRLLVDPKVRSFLEMVADCTPEEFEFIMKFIQLYKEHRSAD
SIO_010081: TOCE_RS12520
subclass of: SO_0000673
so part of: TOCE_RS12520
location: complement(57306..57680)
location: region:57306-57680:-1
so has part: feature:57306-57680:-1:exon

WP_245523152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57306-57680:-1:exon

TOCE_RS12525
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12525
pseudo: true
so part of: sequence
location: complement(<57684..57857)
location: region:57684-57857:-1
so has part: feature:57684-57857:-1:exon
subclass of: SO_0000010

position:57684:-1
position: 57684
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:57857:-1
position: 57857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57684-57857:-1:exon

TOCE_RS12525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12525
inference: COORDINATES: protein motif:HMM:NF024252.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
SIO_010081: TOCE_RS12525
subclass of: SO_0000673
so part of: TOCE_RS12525
location: complement(<57684..57857)
location: region:57684-57857:-1
so has part: feature:57684-57857:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57684-57857:-1:exon

TOCE_RS12715
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12715
pseudo: true
so part of: sequence
location: complement(<57903..58079)
location: region:57903-58079:-1
so has part: feature:57903-58079:-1:exon
subclass of: SO_0000010

position:57903:-1
position: 57903
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:58079:-1
position: 58079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57903-58079:-1:exon

TOCE_RS12715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12715
inference: COORDINATES: protein motif:HMM:NF024252.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
SIO_010081: TOCE_RS12715
subclass of: SO_0000673
so part of: TOCE_RS12715
location: complement(<57903..58079)
location: region:57903-58079:-1
so has part: feature:57903-58079:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57903-58079:-1:exon

TOCE_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: trxA
locus tag: TOCE_RS00310
old locus tag: Toce_0060
so part of: sequence
location: 58235..58549
location: region:58235-58549:1
so has part: feature:58235-58549:1:exon
subclass of: SO_0000010

position:58235:1
position: 58235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58549:1
position: 58549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58235-58549:1:exon

TOCE_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: trxA
locus tag: TOCE_RS00310
old locus tag: Toce_0060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777235.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin
translation: MKPLTLTDDNFEQEVLKSDVPVLVDFWAPWCGPCRMMAPVIDELAAEYEGKIKVGKLNVDENPNSAAAYGVMSIPTLILFKDGQPDKKLIGFRPKREIIAELGI
SIO_010081: TOCE_RS00310
subclass of: SO_0000673
so part of: TOCE_RS00310
location: 58235..58549
location: region:58235-58549:1
so has part: feature:58235-58549:1:exon

WP_013274906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58235-58549:1:exon

TOCE_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00315
old locus tag: Toce_0061
so part of: sequence
location: 58676..59635
location: region:58676-59635:1
so has part: feature:58676-59635:1:exon
subclass of: SO_0000010

position:58676:1
position: 58676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59635:1
position: 59635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58676-59635:1:exon

TOCE_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00315
old locus tag: Toce_0061
inference: COORDINATES: protein motif:HMM:NF013465.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter substrate-binding protein
translation: MKGKGVTAVFLSLLVIVLTLSACSFNTDTPASPHGQEKIRVYTTIYPLYDFALKIAGGRAEVVNVTPAGVEAHDFEPSPRTVADIYEADVFIYLGGPMDPWAEKIAKQLAEKGVVAVAAAEGLLGDEDHENEGDRDRDRDHDHDRGPDPHVWLDPVISKTLAERIAQALIAADGENADHYRQNFEVLKARLDDLDKKFREAFSGVKKRDFVVNHDAFGYLARRYNLNQIAIRGLSPQQEPSPRKLAELARICREKDIKYIFFETAAGSKLAETLAREVGAGTLVLNPIESMTEDEMKAGEDYFSAMEKNLENLKKALAE
SIO_010081: TOCE_RS00315
subclass of: SO_0000673
so part of: TOCE_RS00315
location: 58676..59635
location: region:58676-59635:1
so has part: feature:58676-59635:1:exon

WP_013274907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58676-59635:1:exon

TOCE_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00320
old locus tag: Toce_0062
so part of: sequence
location: 59652..60407
location: region:59652-60407:1
so has part: feature:59652-60407:1:exon
subclass of: SO_0000010

position:59652:1
position: 59652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60407:1
position: 60407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59652-60407:1:exon

TOCE_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00320
old locus tag: Toce_0062
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter ATP-binding protein
translation: MKEENKKTPVVELQNVTFSYNGPPVLEGVSLRVERGDFMALIGPNGAAKSTLMKIMVGLLTPNRGTVRLFGEDIRKFRQWYRIGYVPQQGGHVNLAFPATVEEAVASGLYGGFMKFFKGQEIDKAVREAMATVGIEHLARSLLGELSGGQRQKVFLARSLVKKPEALFLDEPTAGIDPESQEEFYSLLKNLNELHGITVVMITHDIGMAYDRATRIGCVGSRKVDVHENIKDITEDHIAEVMGYRIKKKRH
SIO_010081: TOCE_RS00320
subclass of: SO_0000673
so part of: TOCE_RS00320
location: 59652..60407
location: region:59652-60407:1
so has part: feature:59652-60407:1:exon

WP_013274908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59652-60407:1:exon

TOCE_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00325
old locus tag: Toce_0063
so part of: sequence
location: 60432..61256
location: region:60432-61256:1
so has part: feature:60432-61256:1:exon
subclass of: SO_0000010

position:60432:1
position: 60432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61256:1
position: 61256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60432-61256:1:exon

TOCE_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00325
old locus tag: Toce_0063
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015294790.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO process: GO:0030001 - metal ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter permease
translation: MEIFSYSFMVRAFIAGVIAAVLTSTIGVFVVLRRMSIVGDSLSHASLAGVAAGMLFGFYPFYGALLFSVLAALLIEVMRATFKSYAEVAMAVVMSAGMGTAVVLISLGKSFNADLFSYLFGSLMAVTPGDIKVISVLGLFVTASIILLRRELFAVTFDEDTARLSGVPVRAVNIYFSVITALTVALSVRVVGTLLVSALIVIPAAVSLQLARSFRSAFFISNIVAIFSVVVGLYISFYLDLAPGGTIVLIATSVLFLVLLLKKGVGKGWNWKIC
SIO_010081: TOCE_RS00325
subclass of: SO_0000673
so part of: TOCE_RS00325
location: 60432..61256
location: region:60432-61256:1
so has part: feature:60432-61256:1:exon

WP_013274909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60432-61256:1:exon

TOCE_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00330
old locus tag: Toce_0064
so part of: sequence
location: 61235..61672
location: region:61235-61672:1
so has part: feature:61235-61672:1:exon
subclass of: SO_0000010

position:61235:1
position: 61235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61672:1
position: 61672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61235-61672:1:exon

TOCE_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00330
old locus tag: Toce_0064
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777239.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fur family transcriptional regulator
translation: MELENLLKQKGLKITDQRKAIVKVLKECGCMLSAREIFDKVKKIIPGVNFSTIYRNLDLMSQKGILCGLMVDTGVSLYGLRSEEGHHHHFVCKGCGRSLAIDYCPMGLLEKELAKKGFSHTEHQFVVYGFCGSCGTSGGVKAKSY
SIO_010081: TOCE_RS00330
subclass of: SO_0000673
so part of: TOCE_RS00330
location: 61235..61672
location: region:61235-61672:1
so has part: feature:61235-61672:1:exon

WP_013274910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61235-61672:1:exon

misc_binding
type: Miscellaneous Binding Site
subclass of: SO_0000409
RO_0002162: 555079
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00230
inference: COORDINATES: profile:INFERNAL:1.1.4
note: T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: tRNA
so part of: sequence
location: 61741..62046
location: region:61741-62046:1
so has part: feature:61741-62046:1:region

position:61741:1
position: 61741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62046:1
position: 62046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61741-62046:1:region

TOCE_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00335
old locus tag: Toce_0065
so part of: sequence
location: 62169..62678
location: region:62169-62678:1
so has part: feature:62169-62678:1:exon
subclass of: SO_0000010

position:62169:1
position: 62169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62678:1
position: 62678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62169-62678:1:exon

TOCE_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00335
old locus tag: Toce_0065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777282.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan transporter
translation: MKLKDMILTSLLMAIGLVFHQITPPLVAGMKPDFLLTMLFVALFINPAPKNALLAGMVGGIFAALTTSFPGGQVANIADRIITAQVVALLIRRSRGVSLRIFVPLTGLVGTILSGTVFLLAAMMVMGALPAAFPVLFTAVVLPTAAINSVVTGILYGLVTATGKVVRKI
SIO_010081: TOCE_RS00335
subclass of: SO_0000673
so part of: TOCE_RS00335
location: 62169..62678
location: region:62169-62678:1
so has part: feature:62169-62678:1:exon

WP_013274911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62169-62678:1:exon

TOCE_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00340
old locus tag: Toce_0066
so part of: sequence
location: 62848..63609
location: region:62848-63609:1
so has part: feature:62848-63609:1:exon
subclass of: SO_0000010

position:62848:1
position: 62848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63609:1
position: 63609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62848-63609:1:exon

TOCE_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00340
old locus tag: Toce_0066
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777290.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YlmH/Sll1252 family protein
translation: MDSGSEKMTEAKIRDIFNIAIKNGEKRAGNFLDPAEQQIAEAVARNFPGAGYYFEGGHSEAERKVLVAFPEYLEDQPFFLPIRAIRVIPKDPDEHPSHRDYLGAVLGLGISRDKVGDIIVTKTGADIIVKEEVAEYIGLNLSRVGNVPVSVEEISLKEVATVERSYKEIKGTVASLRLDAIASLAFGISRSKMAPYIKGENVRLNFRTVKDPSAEVKEGDVISAARLGRAKVVEIGGSSKKGRIYVTVHRYTG
SIO_010081: TOCE_RS00340
subclass of: SO_0000673
so part of: TOCE_RS00340
location: 62848..63609
location: region:62848-63609:1
so has part: feature:62848-63609:1:exon

WP_013274912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62848-63609:1:exon

TOCE_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00345
old locus tag: Toce_0067
so part of: sequence
location: 63681..64292
location: region:63681-64292:1
so has part: feature:63681-64292:1:exon
subclass of: SO_0000010

position:63681:1
position: 63681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64292:1
position: 64292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63681-64292:1:exon

TOCE_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00345
old locus tag: Toce_0067
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015294815.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysophospholipid acyltransferase family protein
translation: MFYLLAKLILRIFFSFTGGVKADGISNVPKKGPLIIVSNHQSILDPTVLMACISRRIHFLAAAYLFRIPVLNILLPMAGAIPVKSEKGDLASFKKALRILAKGGVIALFPEGGVSPDGSLRPFKHGWAYLALKSGAPVLPVAVIGTRDVLPVGTYMPRRGRIEVRVGECVAVQKKGRVRQEDFGELNMMMEGRLKSLLVGTRQ
SIO_010081: TOCE_RS00345
subclass of: SO_0000673
so part of: TOCE_RS00345
location: 63681..64292
location: region:63681-64292:1
so has part: feature:63681-64292:1:exon

WP_013274913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63681-64292:1:exon

TOCE_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cas6
locus tag: TOCE_RS00350
old locus tag: Toce_0068
so part of: sequence
location: 64413..65168
location: region:64413-65168:1
so has part: feature:64413-65168:1:exon
subclass of: SO_0000010

position:64413:1
position: 64413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65168:1
position: 65168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64413-65168:1:exon

TOCE_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cas6
locus tag: TOCE_RS00350
old locus tag: Toce_0068
inference: COORDINATES: protein motif:HMM:TIGR01877.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endoribonuclease Cas6
translation: MRVRIHFEPVTLGTSIYYPYYLQTALYSLLDGELGTWMHDKGLVLEKRRLKPICFSRLMGEYKLDRERGIIYFPKGAALVVTSPISEICQSLLTGLLKRGEIILGKSSFPVSKVEIADPKVSGSSILVRTLSPITVYSTMLKFDGSKYTCYFSPKDSEFVSLCRDNLVRKARALGWEENQDFELNIEFKGDPKTNMVKFKNNFIKGYSGYLMISGPTRYLKLALDWGLGAKNSAGFGCLEITGGGNHQDRI
SIO_010081: TOCE_RS00350
subclass of: SO_0000673
so part of: TOCE_RS00350
location: 64413..65168
location: region:64413-65168:1
so has part: feature:64413-65168:1:exon

WP_013274914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64413-65168:1:exon

TOCE_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00355
so part of: sequence
location: 65208..66233
location: region:65208-66233:1
so has part: feature:65208-66233:1:exon
subclass of: SO_0000010

position:65208:1
position: 65208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66233:1
position: 66233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65208-66233:1:exon

TOCE_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00355
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLVDSLIRLGKVLMSFPHSPRAIVKEISALGDPLAGDFLQRIYIVEVYRNPEPKIVCSPTICWGDFEDAGGKKSKKSIFRPDFERAIGTPFFLPQGGNRRQPQGYYPVPVYIVYDEDFKEFSENPEKVVRFLKGRFARTEGAALTGDELMVCAESISRSIRETNISEKRNLKALIAICIIDEDSPYRLKPSGVKIDERIEFKVTESFAYPGMAVYTDLTKILDRLWKAKLTEGAEAGKIDNGICVTCGKIDKLVSIYNKSWPLFLPTWSCPLPQLSAKKKLNLAEKTGGLCEDCYKALTYGASAFRSMEKDIPGWLTKGYSLLLTALVEGKIKKRGTRRSK
SIO_010081: TOCE_RS00355
subclass of: SO_0000673
so part of: TOCE_RS00355
location: 65208..66233
location: region:65208-66233:1
so has part: feature:65208-66233:1:exon

WP_041423802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65208-66233:1:exon

TOCE_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00360
so part of: sequence
location: 66149..67267
location: region:66149-67267:1
so has part: feature:66149-67267:1:exon
subclass of: SO_0000010

position:66149:1
position: 66149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67267:1
position: 67267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66149-67267:1:exon

TOCE_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAYKRLFAPVDSPGGRENKKAGDASVKVTGCVYPAPVDMALSEEDMKFLGEEISLMVSREHAAGRRVRDIQSVVGFESQISEENLQDALRFYIVYYSGDRSKGDVHLRATMEDVLPSILIKLDDVAKSTVMSVAELSRELPGSKNEDLYGQIRSRYGSIPWLLANAYGPGYMWQTLEKVITRKKLDQGSFVTGCGHRMLTLSRSWPDSKWKIFDEVLFFYGFASFLSIYHSTLGIEGGMCKLSDWKELRKLVVETPAEDMVLDTVEKVGFAAGYVIQEFSRRYYAVKAKDFIKHRVMVFGSSLSPDVIWSRGLARLEEYAKNLDIYMEPELSKKNAVTMLAYNRLRDKIKAEKDLFIASFWSGYALSAKTSD
SIO_010081: TOCE_RS00360
subclass of: SO_0000673
so part of: TOCE_RS00360
location: 66149..67267
location: region:66149-67267:1
so has part: feature:66149-67267:1:exon

WP_148218347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66149-67267:1:exon

TOCE_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00365
old locus tag: Toce_0070
so part of: sequence
location: 67292..68242
location: region:67292-68242:1
so has part: feature:67292-68242:1:exon
subclass of: SO_0000010

position:67292:1
position: 67292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68242:1
position: 68242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67292-68242:1:exon

TOCE_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00365
old locus tag: Toce_0070
inference: COORDINATES: protein motif:HMM:NF016963.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I CRISPR-associated protein Cas7
translation: MPEIPRTGEILFIKCVKDGIPNRDPLNDSDARRIFGEDDGRISLSDVSIKRDVRDYIQHRFPDGGPDKKYHIFVRQEKGENGKLRDRKELARKIIEDVSGEDSPDKKKTLMSAAFDVRVFGAVYSVEKESFNQTGPVQFGWAHSLHPVETRYVQGTVVIPSEDASKGQGSIWTTYIVPFAVFCMPGVINQSIANETGATRDDIELLLEALWKGTLHRQARGRGIQQPCFLLHVEYSDPFFRIGYLEDYISLEPGREAWLGGNPPTSLEQVRLNVDRLAEVLDPNGEFGNKIERIRYWVNPALTISCELPGTREKIW
SIO_010081: TOCE_RS00365
subclass of: SO_0000673
so part of: TOCE_RS00365
location: 67292..68242
location: region:67292-68242:1
so has part: feature:67292-68242:1:exon

WP_013274915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67292-68242:1:exon

TOCE_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cas5
locus tag: TOCE_RS00370
old locus tag: Toce_0071
so part of: sequence
location: 68281..68979
location: region:68281-68979:1
so has part: feature:68281-68979:1:exon
subclass of: SO_0000010

position:68281:1
position: 68281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68979:1
position: 68979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68281-68979:1:exon

TOCE_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cas5
locus tag: TOCE_RS00370
old locus tag: Toce_0071
inference: COORDINATES: protein motif:HMM:NF021240.2
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated protein Cas5
translation: MKLLVFELRGDIAHFRRPDGIVTHPTYPAMPRTVLCGLIASILGKSVLDGENWMGYSILSPVRTVTQEMSMLGKGWMGNSGDYFNRLTSIQLIVNPHYRVYYAGDHFETLVEMIRERRSVFHTYLGSAFCLTFPRFTGVIDAEEISPAPGDILTAITIVPTNIVERLITETGERYIPMRGARYTVDRDRNFKGTLNFIIEESGRPIKFRTRDSAGSVNYRILKVENGVICLW
SIO_010081: TOCE_RS00370
subclass of: SO_0000673
so part of: TOCE_RS00370
location: 68281..68979
location: region:68281-68979:1
so has part: feature:68281-68979:1:exon

WP_013274916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68281-68979:1:exon

TOCE_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00375
old locus tag: Toce_0072
so part of: sequence
location: 68973..71408
location: region:68973-71408:1
so has part: feature:68973-71408:1:exon
subclass of: SO_0000010

position:68973:1
position: 68973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71408:1
position: 71408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68973-71408:1:exon

TOCE_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00375
old locus tag: Toce_0072
inference: COORDINATES: protein motif:HMM:TIGR01587.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated helicase/endonuclease Cas3
translation: MVIPFRECVARPKSGDGNPNLLTDHLFAVAKFMGDPKGGDESRLRFLAGLCHDVGKATKRWQMYILSKEEGRVVASGGSHSPLGSMIFFVCSEQLVTKDLPRRFREYLITQLTLDIAGHHGSIKNIDPAWPPWEEALLSAEGVYPYETVDLDGFFDFVREYFPEITLTSRSFADRLQGIDRRWAVVADKALGYAKRYIDNSADRDSAAAGLIMRDRTSAMISADRFHAAGLNFAFFHPEEARVAINNLAEECSRLQKNAAPETLRIVKLRNDHQKEALETYRTFPDRLIYSLELATGLGKTLTALRIALEAVASGKCSRVIYVAPYISILSQATNVIREATGISDIIEHHHLSFLDIDYEHLRSEEDGAFLIDSWQSKIVTTTFNQFFLALFPTKAQHTVRIQALNNAFVIIDEPQIIEPKAWAAFLKTLEAAAKRLHFQSILCTATLPHASDYLNEEYMCLSRGDSLIPRYIIKTLEGKWDAQTLAELAVKKLMEKGSVAVILNTVADAARVYMAVKDLILRGYFENITGIDIFNLTGCMTPLHKSAWISRIKDSLRRGKKCIVVCTQILEAGVDLSFRCVIRARPVIPSVIQAAGRGNRHGEGDPAEVLVVDFVRDDGEDSRKYVYKNPIFREVTDEQLEICKEFSEKDSREIIENFYREAFKRNPPTRKMQLIYEAAMGQWSRLKEIEPFEGDYPKVMVFVPRVFKGSGGPDIPEIIQRAMKYFGISGVSDIYQRYLEKGFWKSLSFRDKKLFMALIEQFCVCVSVKRADSIVRIPEGAFIGSLVDDRIYSEDTGMALAEDSTEFRMF
SIO_010081: TOCE_RS00375
subclass of: SO_0000673
so part of: TOCE_RS00375
location: 68973..71408
location: region:68973-71408:1
so has part: feature:68973-71408:1:exon

WP_013274917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68973-71408:1:exon

TOCE_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cas4
locus tag: TOCE_RS00380
old locus tag: Toce_0073
so part of: sequence
location: 71446..71952
location: region:71446-71952:1
so has part: feature:71446-71952:1:exon
subclass of: SO_0000010

position:71446:1
position: 71446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71952:1
position: 71952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71446-71952:1:exon

TOCE_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cas4
locus tag: TOCE_RS00380
old locus tag: Toce_0073
inference: COORDINATES: protein motif:HMM:TIGR00372.1
GO function: GO:0004518 - nuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated protein Cas4
translation: MLNEEINITGTLVWYYFICPRQVWLMSHNINPDEDDENVAIGRFLHQESYARERKEISFHGGKVDVLGTREGQLVIAEIKKSSKAERSAKMQLAFYLFELRKLGIEAKGELRYLEEKRKEQIVLDEQLTREVENAITRILKLMYEPVPPKPEKIRWCSNCAYREFCWA
SIO_010081: TOCE_RS00380
subclass of: SO_0000673
so part of: TOCE_RS00380
location: 71446..71952
location: region:71446-71952:1
so has part: feature:71446-71952:1:exon

WP_041423804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71446-71952:1:exon

TOCE_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cas1b
locus tag: TOCE_RS00385
old locus tag: Toce_0074
so part of: sequence
location: 72005..72997
location: region:72005-72997:1
so has part: feature:72005-72997:1:exon
subclass of: SO_0000010

position:72005:1
position: 72005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72997:1
position: 72997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72005-72997:1:exon

TOCE_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cas1b
locus tag: TOCE_RS00385
old locus tag: Toce_0074
inference: COORDINATES: protein motif:HMM:TIGR03641.1
GO function: GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-B CRISPR-associated endonuclease Cas1b
translation: MKKAIYIFSSGELKRKDNTLYLETEDRKNYIPVENTSEIYIFGEVNINKRFLEFASQNQIIIHFFNHYDYYVGSFYPREFLNSGYMILKQAEYYLDKEKRLTIAREFVRGAVKNILQVIRYYINRGKDLVKIDERIRELEGRIDDFNEIDELMAIEGNIRECYYSSFDKILQNQDFKFCKRTTRPPKNNLNSLISFGNSMIYTIVLSEIYKTHLDPRIGFLHATNFRRFTLNLDVAEIFKPIIVDRVILTLIGRKVITKDDFEQDSEGLIIKEKAKREFIKELEEKLSTTFKHRQIGKNVSYRRLIRLELYKLEKHLMGEQEYSAFVAGW
SIO_010081: TOCE_RS00385
subclass of: SO_0000673
so part of: TOCE_RS00385
location: 72005..72997
location: region:72005-72997:1
so has part: feature:72005-72997:1:exon

WP_013274919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72005-72997:1:exon

TOCE_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cas2
locus tag: TOCE_RS00390
old locus tag: Toce_0075
so part of: sequence
location: 73019..73282
location: region:73019-73282:1
so has part: feature:73019-73282:1:exon
subclass of: SO_0000010

position:73019:1
position: 73019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73282:1
position: 73282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73019-73282:1:exon

TOCE_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cas2
locus tag: TOCE_RS00390
old locus tag: Toce_0075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777246.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endonuclease Cas2
translation: MFIILVYDVGEKRVAKVLKICRKYLTWVQNSVFEGEITESAYKKLKLELKRAIVEDEDSVIFYILRTIKYSDREMLGRKKGGEEIFL
SIO_010081: TOCE_RS00390
subclass of: SO_0000673
so part of: TOCE_RS00390
location: 73019..73282
location: region:73019-73282:1
so has part: feature:73019-73282:1:exon

WP_013274920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73019-73282:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 555079
inference: COORDINATES: alignment:crt:1.2
inference: COORDINATES: alignment:pilercr:v1.02
rpt family: CRISPR
rpt type: direct
rpt unit range: 73465..73494
rpt unit seq: gttactagcttacctatgaggggttgaaac
so part of: sequence
location: 73465..78146
location: region:73465-78146:1
so has part: feature:73465-78146:1:region

position:73465:1
position: 73465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78146:1
position: 78146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73465-78146:1:region

TOCE_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00400
old locus tag: Toce_0077
pseudo: true
so part of: sequence
location: 78250..79515
location: region:78250-79515:1
so has part: feature:78250-79515:1:exon
subclass of: SO_0000010

position:78250:1
position: 78250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79515:1
position: 79515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78250-79515:1:exon

TOCE_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00400
old locus tag: Toce_0077
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611174.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: TOCE_RS00400
subclass of: SO_0000673
so part of: TOCE_RS00400
location: 78250..79515
location: region:78250-79515:1
so has part: feature:78250-79515:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78250-79515:1:exon

TOCE_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00405
old locus tag: Toce_0078
so part of: sequence
location: complement(79808..81028)
location: region:79808-81028:-1
so has part: feature:79808-81028:-1:exon
subclass of: SO_0000010

position:79808:-1
position: 79808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81028:-1
position: 81028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79808-81028:-1:exon

TOCE_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00405
old locus tag: Toce_0078
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013276425.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MDVVYSHVCGLDVHKKSVVACVITPDGKEIRSFSTMTDDLIALKEFIKNKGCTVVAMESTGSFWKPIYNLLELENINILLVNAKHIKNVPGRKTDVKDAEWIASLLRHGLLKGSFVPDREQRELRELVRYRHSLVEERSRELNRIQKVLEGANIKLSSVVSDINGMSSHSILEALISGVDDPEILAELSHGKLKNKKEDLKRALKGFINYHQRKMLEIQLRHIDYLDEEIERLDEEIKNRMLPFEEDLALLDTIPGVGRRNAEQIIAEIGTNMDQFPSAAHLCSWAGLCPGQNESAGKRKSARTRKGNKKLRSALVEAARAASRAKDTYLSSQYHRIAARRGSNRAAVAVANSILTIVYHILKRRQPYIELGPNFYEEKRRNMVIRQSLKKLESLGLKVTVETMVS
SIO_010081: TOCE_RS00405
subclass of: SO_0000673
so part of: TOCE_RS00405
location: complement(79808..81028)
location: region:79808-81028:-1
so has part: feature:79808-81028:-1:exon

WP_013274922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79808-81028:-1:exon

TOCE_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cas6
locus tag: TOCE_RS00410
old locus tag: Toce_0079
so part of: sequence
location: 81558..82370
location: region:81558-82370:1
so has part: feature:81558-82370:1:exon
subclass of: SO_0000010

position:81558:1
position: 81558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82370:1
position: 82370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81558-82370:1:exon

TOCE_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cas6
locus tag: TOCE_RS00410
old locus tag: Toce_0079
inference: COORDINATES: protein motif:HMM:TIGR01877.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endoribonuclease Cas6
translation: MSKKESTIAGGGLMRMKLTFNSESPVALPIHYNHIIQGMIYSNLTQEFAEFMHEDGFPWGKRRFKLFTFSRLEGKFRMVEGGRIEFEPPFSFIVSSPLERFLRELAGGLLKNDDLSLAGRRVVLENVTVHAAVEDHDLGDRIKINMLSPVVAYKTLVEGGKKRTLYLTPLQEEFGELLKNNLLKKYAVLTGQEPGERKFEIKPAFPLSEKHCKIIKYKDVIIKGWMGVYTLRGDPALLKIAYDAGLGSKNSQGFGCFEILEGLKRRSGAI
SIO_010081: TOCE_RS00410
subclass of: SO_0000673
so part of: TOCE_RS00410
location: 81558..82370
location: region:81558-82370:1
so has part: feature:81558-82370:1:exon

WP_049817869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81558-82370:1:exon

TOCE_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00415
old locus tag: Toce_0080
so part of: sequence
location: complement(82600..82935)
location: region:82600-82935:-1
so has part: feature:82600-82935:-1:exon
subclass of: SO_0000010

position:82600:-1
position: 82600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82935:-1
position: 82935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82600-82935:-1:exon

TOCE_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00415
old locus tag: Toce_0080
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNLKQKLDELCTWVGIVGWVTTIAGAIEAIIGLFAYVIGALPGVITLILGIKLLGARKYAKSIALSQEYNEQDMVLLIKELTAYFKIQGLFIIIGFSAAIIVALSGFLLYQ
SIO_010081: TOCE_RS00415
subclass of: SO_0000673
so part of: TOCE_RS00415
location: complement(82600..82935)
location: region:82600-82935:-1
so has part: feature:82600-82935:-1:exon

WP_013274924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82600-82935:-1:exon

TOCE_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00420
old locus tag: Toce_0081
so part of: sequence
location: 83249..84472
location: region:83249-84472:1
so has part: feature:83249-84472:1:exon
subclass of: SO_0000010

position:83249:1
position: 83249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84472:1
position: 84472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83249-84472:1:exon

TOCE_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00420
old locus tag: Toce_0081
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013275237.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MFYGGIDVAKHSHEVCLVNDSGDIVLKMHLDNNHKGMNKLLQALERLGLKPDDVKFCLEATGHYWLPIYCYLTNQGFELHVINPIQSDALRNLYVRKTKTDQKDALLLADLLRLGRAPETRLPSETTLKLQSLSRLRFEFVRQVGGLKNRVLGILDRIFPEYPDCFSDVFIRTSRELLKSYPEPEELAEVDLSELSAFLKEHSRGRFGEERAKKIQSLAKGTFGITMALDAFTLQLRLLVEQIEFIEEQIKVIEDAINEVMEELRPSKDTPYRHVIETIPGIGPVLAAAIIGEIGDISRFPNPRALVAYAGLDATVRASGLFEGTRNRMSKRGSPVLRNSLWLAAVSARRFNPELRAYYEQKRSQGKHSNVATGAVARKLVHLIYSLWKDNRPYDPDYQWSPPGKNA
SIO_010081: TOCE_RS00420
subclass of: SO_0000673
so part of: TOCE_RS00420
location: 83249..84472
location: region:83249-84472:1
so has part: feature:83249-84472:1:exon

WP_013274925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83249-84472:1:exon

TOCE_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00425
old locus tag: Toce_0082
so part of: sequence
location: 84877..85107
location: region:84877-85107:1
so has part: feature:84877-85107:1:exon
subclass of: SO_0000010

position:84877:1
position: 84877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85107:1
position: 85107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84877-85107:1:exon

TOCE_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00425
old locus tag: Toce_0082
inference: COORDINATES: protein motif:HMM:NF013379.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase TusA family protein
translation: MTEYLIDSLGDMCPVPNLKVQAKIKKLRPGDRIVILTDHSCAVTTIVDEMKRKRLKTKVEEVENGVWRVVISMAAR
SIO_010081: TOCE_RS00425
subclass of: SO_0000673
so part of: TOCE_RS00425
location: 84877..85107
location: region:84877-85107:1
so has part: feature:84877-85107:1:exon

WP_013274926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84877-85107:1:exon

TOCE_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00430
old locus tag: Toce_0083
so part of: sequence
location: complement(85104..86006)
location: region:85104-86006:-1
so has part: feature:85104-86006:-1:exon
subclass of: SO_0000010

position:85104:-1
position: 85104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86006:-1
position: 86006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85104-86006:-1:exon

TOCE_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00430
old locus tag: Toce_0083
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013779588.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: selenium metabolism-associated LysR family transcriptional regulator
translation: MNINLLKSFIAIAETQSLSRAAERLFVTQPALSQQIKQLENHFSVQLIERTNRGILLTEAGRILYDYASRIVSIYEDLEKNMEDFRASISGTLIVGASSIVGGYAVPCSIFIFKEKYPETNIKLKVGNRKYILEELRDGAIDVAIIEGEKPIGNFVSSEIASDEMVVIAPNREPWNGKDTLSPEEFLSQPIIMREDGSGTRQMIEKCLMQAGIDKSRLNIVMELSSADSIKAAVEAGHGISIMPRLAVRKELYNKTLVALKIEGVPLVQKIHLAYKREKVKSQAAKAFIKFMHTPNRGFC
SIO_010081: TOCE_RS00430
subclass of: SO_0000673
so part of: TOCE_RS00430
location: complement(85104..86006)
location: region:85104-86006:-1
so has part: feature:85104-86006:-1:exon

WP_013274927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85104-86006:-1:exon

TOCE_RS12535
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12535
pseudo: true
so part of: sequence
location: 86172..87344
location: region:86172-87344:1
so has part: feature:86172-87344:1:exon
subclass of: SO_0000010

position:86172:1
position: 86172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87344:1
position: 87344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86172-87344:1:exon

TOCE_RS12535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12535
inference: COORDINATES: protein motif:HMM:NF016064.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: YeeE/YedE family protein
SIO_010081: TOCE_RS12535
subclass of: SO_0000673
so part of: TOCE_RS12535
location: 86172..87344
location: region:86172-87344:1
so has part: feature:86172-87344:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86172-87344:1:exon

TOCE_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00445
old locus tag: Toce_0086
so part of: sequence
location: 87455..90004
location: region:87455-90004:1
so has part: feature:87455-90004:1:exon
subclass of: SO_0000010

position:87455:1
position: 87455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90004:1
position: 90004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87455-90004:1:exon

TOCE_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00445
old locus tag: Toce_0086
inference: COORDINATES: protein motif:HMM:NF019604.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MYPAEVLEKMKEIVDNCMGDAPAYCVATCPMHTDARGYIKLISEGRYKEAIKLIREKLFLPATLGRICAHPCEQKCKRNEVGHQPMSIAALKRFAAEYDDPSDWDLSMEPEKDIKIAVIGSGPAGAQAAIDLRRKGYKVTIFEKLPVAGGMLRVGIPEYRLPRDILEKEYSYLTKLGIEIRLNTEVGKDVAFGDIRDNYDAVLIAVGAHRSVMLPVPGIDLKGVIPAVDFLREVSMTRKYPVGKRVAVIGGGNVAMDVARSLIRVGAKKVDVFCLEKREQMPAHSWEVEEAEEEGVVIHNGWGPKEIVGEDGKVKKIVFKACESVFDKEGRFNPCYDESKLYEIEADNVVLAVGQTADSSFLADTGIELLKNGKVKADPVTLETSLKGVFAAGDAVGRPLFAIEAMAEGRKAAVSIDRYLKGEDLRAGREFEGAYETWLEKDVSAEQFLPRVQTMKLSPEERIKGFMEVDLGFTEEMARKEAERCLQCECRLCVKECLMLQDFTHCPKELFKEILDTGKVNPLVPYSCNMCNKCTLECPKEFRLADRFSEIRKELVKQGIGPLKQHRPILMHQKFSFSRIFNVTLPDKKAGFTRRIFYPGCSLPSYNPEAVGRIYEYLKEKLPGTGAILKCCGKPTKALGQEELFKQRSAMVVEEVRRLGAEEVITACQSCYKTLSEYLPKHIPGIKVRSLWVVLKEIGLPEKARGIAKNSGMTVAIHDSCVTRDVPEIHDAVRFIVSELGYGIEELPNSRGNTRCCGYGGMVVPANPELAKRVMQRRANEAKCEYIATYCAACRASMVMGGKKGLHLLDLIFGGDWRGKETPGVDSTLQSWSKRWKTKKILTRIANKK
SIO_010081: TOCE_RS00445
subclass of: SO_0000673
so part of: TOCE_RS00445
location: 87455..90004
location: region:87455-90004:1
so has part: feature:87455-90004:1:exon

WP_013274930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87455-90004:1:exon

TOCE_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00450
old locus tag: Toce_0087
so part of: sequence
location: 90024..90980
location: region:90024-90980:1
so has part: feature:90024-90980:1:exon
subclass of: SO_0000010

position:90024:1
position: 90024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90980:1
position: 90980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90024-90980:1:exon

TOCE_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00450
old locus tag: Toce_0087
EC number: 2.8.1.-
inference: COORDINATES: protein motif:HMM:NF012790.2
GO function: GO:0016783 - sulfurtransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase
translation: MRKIVALALILLLAVSLAACSQQKSATAPAKFLTGKEKGYANPEAIITPQELKELIDKNAVKIIDARPEDRYAKEHIPGAVRAWRNEYNDPTHKYEGMRATPEQFAQLMSKLGIANGDLVVVYGDAEKHSPADAARVWWLFKLYGDNKVRILDGGIEAWKAAGFETTKELPQVTETKYEVKVDTSLLAEVEDVLAGQNNPDVIILDTREEAEFLGKQKVKGAARAGRIPGAVWLYWGDALNEDKTLKSYDELKKLYEEKGVTPDKTVIPYCQSAVRSAHATFVMTELLGYKNVKNYDGSWVEWSQRTDLPIETGEPKN
SIO_010081: TOCE_RS00450
subclass of: SO_0000673
so part of: TOCE_RS00450
location: 90024..90980
location: region:90024-90980:1
so has part: feature:90024-90980:1:exon

WP_013274931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90024-90980:1:exon

TOCE_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00455
old locus tag: Toce_0088
so part of: sequence
location: 91044..91757
location: region:91044-91757:1
so has part: feature:91044-91757:1:exon
subclass of: SO_0000010

position:91044:1
position: 91044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91757:1
position: 91757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91044-91757:1:exon

TOCE_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00455
old locus tag: Toce_0088
inference: COORDINATES: protein motif:HMM:NF020893.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TVP38/TMEM64 family protein
translation: MSQKVVRMHGSGKDGRMKLLITVACIAVVAFVLKKLGVVQYLSLENTAKLKDWIAGYGALGPVIYIALFVTACIFFLPGLPIGVLGGVAFGPVKGALFASIGATLGATAAFLIARYAARSMVESWVEKNPQLKKLDEGVRQQGWRMLMITRLVPIFPFNLQNYAYGLTDIPLLTYIVVSFLCMLPGTIAYTFAGGTLTSGGDIKKILTYLGIAAVFFVMLSLIPGWIRKKHGGNLGI
SIO_010081: TOCE_RS00455
subclass of: SO_0000673
so part of: TOCE_RS00455
location: 91044..91757
location: region:91044-91757:1
so has part: feature:91044-91757:1:exon

WP_013274932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91044-91757:1:exon

TOCE_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00460
old locus tag: Toce_0089
so part of: sequence
location: 91770..92366
location: region:91770-92366:1
so has part: feature:91770-92366:1:exon
subclass of: SO_0000010

position:91770:1
position: 91770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92366:1
position: 92366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91770-92366:1:exon

TOCE_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00460
old locus tag: Toce_0089
EC number: 2.7.8.-
inference: COORDINATES: protein motif:HMM:NF013250.2
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO process: GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDP-alcohol phosphatidyltransferase family protein
translation: MLDTGARKFFQPYFTKLARMLVWLGLTPNAVTAAAFAMGLLGAAALYFDLREEALVLLWLSGLADVLDGTVARLTGRSSPFGALLDLIFDRIVEMGYITVMAARMPEARMASIFLLCSIIFSFSVFLASGALISKKTEKAFYYQPGLAERTETFLVFSLAILMPQSTALIFNIFTAMIVFTGIQRMAEVYGYLKKLQG
SIO_010081: TOCE_RS00460
subclass of: SO_0000673
so part of: TOCE_RS00460
location: 91770..92366
location: region:91770-92366:1
so has part: feature:91770-92366:1:exon

WP_013274933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91770-92366:1:exon

TOCE_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00465
old locus tag: Toce_0090
so part of: sequence
location: 92372..93625
location: region:92372-93625:1
so has part: feature:92372-93625:1:exon
subclass of: SO_0000010

position:92372:1
position: 92372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93625:1
position: 93625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92372-93625:1:exon

TOCE_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00465
old locus tag: Toce_0090
inference: COORDINATES: protein motif:HMM:NF008633.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MRKALIIVLVAVLVVAAGLAGCDTKEVKDTGDIQKKSWEQILAEARGTTVNFYGWGGDQRINKWLDEVVAPRLEDKYGIKLNRVGMDIDEILNKLLGEKQAGREKGSIDVVWINGENFYTARKNGLLFGPFTSMLPNFQKYVNPDDPEVKNDFGYPIEGYEAPYGRAQLVLTYDSTRLPESEVPKDHKALLELAKKYPGRITYPAPPDFTGSAFVRNIICDVIGRDKLEGLDPGDKKAVEEAISPAIEYLRELKLYLWKNGESYPATLAQLNNMFADGEVLISMDYAPYAAAGKVKTGEFPPTVRSFVFEKGTLGNTHYLAIPFNAPNKAAALVFINYILSPEVQASKNDPANWGDLPVIDFDRLSTEERKLFEDIKLGEAALPGDYLQAHRLAEPDASLIPVIEEIWVEKVLKEGK
SIO_010081: TOCE_RS00465
subclass of: SO_0000673
so part of: TOCE_RS00465
location: 92372..93625
location: region:92372-93625:1
so has part: feature:92372-93625:1:exon

WP_148218349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92372-93625:1:exon

TOCE_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00470
old locus tag: Toce_0091
so part of: sequence
location: 93627..94484
location: region:93627-94484:1
so has part: feature:93627-94484:1:exon
subclass of: SO_0000010

position:93627:1
position: 93627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94484:1
position: 94484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93627-94484:1:exon

TOCE_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00470
old locus tag: Toce_0091
inference: COORDINATES: protein motif:HMM:NF012738.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MNGERLRPYVMLAPVLLVEAWLIFTGIHTAFEQSLGHFPAAGLSGYSLKFYIAVLKNPDFLKSLVFSFYVAFVSSALAVILGIFLAVLLVHSPRKENLSNYLYRLPIIVPHTIAVLLVLSILSSSGILPRLLYALGLLSAENAFPGMVFDRAGIGVILTYLWKGTPFATFMVYTILKNTNPGLFEAALSLGAGRWEAFYYVVLPLLKPAVIPSFLFLFAYAFGSWEVPYLIGPTHPRALPVLAYTYYVSPELSARPYAMAVNMVMVAVSFILIYIYSRQMARAGW
SIO_010081: TOCE_RS00470
subclass of: SO_0000673
so part of: TOCE_RS00470
location: 93627..94484
location: region:93627-94484:1
so has part: feature:93627-94484:1:exon

WP_013274935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93627-94484:1:exon

TOCE_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00475
old locus tag: Toce_0092
so part of: sequence
location: 94486..95286
location: region:94486-95286:1
so has part: feature:94486-95286:1:exon
subclass of: SO_0000010

position:94486:1
position: 94486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95286:1
position: 95286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94486-95286:1:exon

TOCE_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00475
old locus tag: Toce_0092
inference: COORDINATES: protein motif:HMM:NF012738.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MERRFVNLLLHAAIGVMIFPMAVLVLWAFAREWPWPHLFPTGFSVRGWVHLLNPCTGVLPVLLYSVLLSSVVAFLTVIFSLPAARALAFHEFRGKRAIEIFVLSPMVIPTTAIAMGIHVNFIRIGLADTFWGVVLAHLLLCLPYGIKILTGVFEALGDRIEQQARVLGAGWLETYIYVTLPLISPGLVTAGIMAFVVSFSQYFLTFLIGGGRVVTFSMLLFPFIQGGDRHLSAVFSLAFIGTVLIWVFALEALVKRWVKKGQYFYT
SIO_010081: TOCE_RS00475
subclass of: SO_0000673
so part of: TOCE_RS00475
location: 94486..95286
location: region:94486-95286:1
so has part: feature:94486-95286:1:exon

WP_013274936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94486-95286:1:exon

TOCE_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00480
old locus tag: Toce_0093
so part of: sequence
location: 95305..96336
location: region:95305-96336:1
so has part: feature:95305-96336:1:exon
subclass of: SO_0000010

position:95305:1
position: 95305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96336:1
position: 96336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95305-96336:1:exon

TOCE_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00480
old locus tag: Toce_0093
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MAEIRVENVSKAFGGEKIIKDISFEVAGGQLLSLLGPSGAGKTTLLKIIAGLLKPDAGEIYFDGVPVVKVPVEKRGAVLVFQDYLLFPHMTVEQNVAFGLRMAGVPRYKRARIVAEMLALVDMKGYEHKYPHELSGGQKQRVALARALAVKPRVLLLDEPFSNLDPRLRESMREFTRDLQRRMEMTTILVTHDWEEAFMMSDRIAVLIDGSIKQVGTPEEVYFRPASLEVAEFLGDKKNYVKGMVKNGVFFCPLGNLPAPQAADGDYTAVIRPEHVRISPGGERAGWTICDTRFAGGCVYYRVFREGLSLLCAADNTVIYRPGEKVDVSVDFSKAILFRTGFD
SIO_010081: TOCE_RS00480
subclass of: SO_0000673
so part of: TOCE_RS00480
location: 95305..96336
location: region:95305-96336:1
so has part: feature:95305-96336:1:exon

WP_013274937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95305-96336:1:exon

TOCE_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00485
old locus tag: Toce_0094
so part of: sequence
location: 96442..96762
location: region:96442-96762:1
so has part: feature:96442-96762:1:exon
subclass of: SO_0000010

position:96442:1
position: 96442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96762:1
position: 96762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96442-96762:1:exon

TOCE_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00485
old locus tag: Toce_0094
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKWIRAMLLSLLGYILMEAGRSFNREVKGKGKTRVDLSPLYLAGILLVLMAAGVVLLELWPLIALGGLAWYLYKSRKKIPDTGRKGEDGSIDMEYDERTGTWKRS
SIO_010081: TOCE_RS00485
subclass of: SO_0000673
so part of: TOCE_RS00485
location: 96442..96762
location: region:96442-96762:1
so has part: feature:96442-96762:1:exon

WP_013274938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96442-96762:1:exon

TOCE_RS12540
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12540
so part of: sequence
location: complement(96774..96926)
location: region:96774-96926:-1
so has part: feature:96774-96926:-1:exon
subclass of: SO_0000010

position:96774:-1
position: 96774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96926:-1
position: 96926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96774-96926:-1:exon

TOCE_RS12540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12540
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEEACLCLDVQNSFTNRGTSTPSTATYSIRVRVSPGRSVRNLMILSVPFI
SIO_010081: TOCE_RS12540
subclass of: SO_0000673
so part of: TOCE_RS12540
location: complement(96774..96926)
location: region:96774-96926:-1
so has part: feature:96774-96926:-1:exon

WP_245523131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96774-96926:-1:exon

TOCE_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00490
old locus tag: Toce_0095
so part of: sequence
location: 96934..98001
location: region:96934-98001:1
so has part: feature:96934-98001:1:exon
subclass of: SO_0000010

position:96934:1
position: 96934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98001:1
position: 98001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96934-98001:1:exon

TOCE_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00490
old locus tag: Toce_0095
inference: COORDINATES: protein motif:HMM:NF013704.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA methyltransferase
translation: MSYRACFKPQLPSFFIQLLTGEGDVVYDPFSGRGTTVVEAGLLGRRVISNDINPLSEILCRPRFFIPSPDEVEERLRQVPINTGARAEMDLSMFYHPDTEAEIVSLRNYLNKRRQEGTEDDVDRWIRMVATSRLTGHSRGFFSVYTLPPNQAVTPERQAKINERLGQKPEYRDTRAIIMKKTKSLLGRLERREKLNLLKAGRSALFLSCDARHTPGIESGSVDLTVTSPPFLDVVDYASDNWLRCWFNGIDPNDIAKRITVARDLSDWCGIMQEVFFELYRVTAPGGWVAFEVGEVRRGSINLDEHVVPLGLRAGFECPGIVVNQQHFTKTSHIWGIDNNSYGTNTNRIVLFYKG
SIO_010081: TOCE_RS00490
subclass of: SO_0000673
so part of: TOCE_RS00490
location: 96934..98001
location: region:96934-98001:1
so has part: feature:96934-98001:1:exon

WP_245523153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96934-98001:1:exon

TOCE_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: dnaE
locus tag: TOCE_RS00495
old locus tag: Toce_0096
so part of: sequence
location: complement(98004..101189)
location: region:98004-101189:-1
so has part: feature:98004-101189:-1:exon
subclass of: SO_0000010

position:98004:-1
position: 98004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101189:-1
position: 101189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98004-101189:-1:exon

TOCE_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: dnaE
locus tag: TOCE_RS00495
old locus tag: Toce_0096
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:NF004226.0
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit alpha
translation: MAFCHLHVHSEYSLLDGLCRLPLLVKKAAELAMPALALTDHGGLYGMVPFYRLCLEAGIKPILGCEVYVVEDVTCRWGKESFHHLVLLSENQEGFKNLLSLVTRSHVDGFYYRPRVDKKLLASHAKGLIALSGCIRGQVADLILRGDVKAAEEAAKEYADIFGRDNFFLELQYHGLAAEKKANFWMRSIAERLGIGLVATNDVHYLQPSDAGTHRVLLAVQTLSALGEAASLPGNQHYLKSPAEMEALFREIPGALENTVAIAERCDVRLPLGGTKLPEIALPEGVSADDYLRKLCFQGAAARYGRPLPQEVKDRLNYELSVIKKTGYAGYFLIVKDIVDFARKRGIIVGAGRGSAAGSLAAYVLGITDVDPLKYGLIFERFLNPERISPPDIDIDLCHLGRREVLEYIRHRFGRERIAHVGAFSTLQARAALRDTGRALGLAYEKIDAACSRIPYSHINLEDALKESPHLSSLVKNDAGVRRAFAIARKLQGLPRHMTQHSAGVAIADRPLTEYVPLQRASGEEIITQADMYALEELGLVKIDLLGLRFLTVIGETLKLVRDRYGIDMKPEEIPLDDEKTYMVLARGDTGGCFQLESGGMRKMLRRIKPKNIEDLSAVLALYRPGPLKSGMAEEFIARRQGIKPVSYIHPALEPVLRDTYGVFVYQEQLMQAACLISGYTPGEADLLRRAIAKKKKDEIEREKPRFLKRAVERGIDEKTAGELFATLEAFGDYGFNKSHSISYAVMAYRTVYLREHFPLEYFASLFNLYMDTPSRLQLYLCEARRREIRLLLPDINMSGAGFVPEGGPHQRAIRAGLALIKNLGPRGMEEILQAREDCPFTGFFDFCRRVDRRVINARALESLVFSGAFDSFGIPRPALIISLKWMLSGCSGRPQNQLCLLNENPDVEALAADLSVADFTPSQKMAQEMMSMGYYITAHPMEFIKGRPEETCTHTASDVEEIGEKQRVRISGILLDLRSGRTRSGERMLFARLEDLTGSVELVIFPRQLRLFAPWIYVGSVVLVEGWVDLNDDGHRTVVAEEIRPLTGCDLTTSREGRCP
SIO_010081: TOCE_RS00495
subclass of: SO_0000673
so part of: TOCE_RS00495
location: complement(98004..101189)
location: region:98004-101189:-1
so has part: feature:98004-101189:-1:exon

WP_013274939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98004-101189:-1:exon

TOCE_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00500
old locus tag: Toce_0097
so part of: sequence
location: 101353..101766
location: region:101353-101766:1
so has part: feature:101353-101766:1:exon
subclass of: SO_0000010

position:101353:1
position: 101353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101766:1
position: 101766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101353-101766:1:exon

TOCE_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00500
old locus tag: Toce_0097
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVQRVGYGVAAGLISALISLVFNTRLAGAVKEEAVTLGAPVLEEIIKTGLAALLGGDILSSHVAFGAVEAFYDAARSWSRRSCLAGALALLSHAFFGAAAVMTADRSGNLAAGIFISALLHIGWNGWVMGNRVQSKK
SIO_010081: TOCE_RS00500
subclass of: SO_0000673
so part of: TOCE_RS00500
location: 101353..101766
location: region:101353-101766:1
so has part: feature:101353-101766:1:exon

WP_013274940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101353-101766:1:exon

TOCE_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00505
old locus tag: Toce_0098
so part of: sequence
location: 101812..102720
location: region:101812-102720:1
so has part: feature:101812-102720:1:exon
subclass of: SO_0000010

position:101812:1
position: 101812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102720:1
position: 102720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101812-102720:1:exon

TOCE_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00505
old locus tag: Toce_0098
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777462.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GerMN domain-containing protein
translation: MMKKITAVCLLLCLLAILAACMPGKRTARINLYYNNEDNSEILVEERTVQMPRGKTLSQVAVEELLKGPTKEGLKSNIPKGTRLLELKVDNKQATVNFSKEFARFPGVMAESFVVISVVNTLADLPEIEKVLILVEGKELIAPSGNPYGPLGRYDIEKINRDLNKVAVTLYFTGENAMYLEPEVREVQKDGRPLEQIVVEELIKGPTKPGLFRTIPEGTKLLSIEVKDGIAYVNFSKEFKENHWGGSTGEAHTINSVVNSLTELPGIEKVQFLIEGKKEDTLAGHMIFDEPFSRNENIIKKE
SIO_010081: TOCE_RS00505
subclass of: SO_0000673
so part of: TOCE_RS00505
location: 101812..102720
location: region:101812-102720:1
so has part: feature:101812-102720:1:exon

WP_013274941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101812-102720:1:exon

TOCE_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: mfd
locus tag: TOCE_RS00510
old locus tag: Toce_0099
so part of: sequence
location: 102939..106472
location: region:102939-106472:1
so has part: feature:102939-106472:1:exon
subclass of: SO_0000010

position:102939:1
position: 102939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106472:1
position: 106472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102939-106472:1:exon

TOCE_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: mfd
locus tag: TOCE_RS00510
old locus tag: Toce_0099
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777300.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription-repair coupling factor
translation: MDIDFLSREITEFNKLAGDLEKGLSGLFAYGLSDSQRAFLIAAVRKRFPKPVLVVTADSLDARKLADDLAYFLGTEDVEMFPASSVIPYETAARSPELTAQRLKVMESLVTGKQPVVVSPLQALTNRMMPPDVVKKFTIKLRVGDSIPLEEAVLKLSFMGYERVDTVEGRGQFAVRGGILDVYPLTAENPYRMEFFGDEVDSIREFSVEDQRSMDKLEEVFIFPAREVVFDRETAKNAAISIARELEDRKKAFELTGSAQIAAQLEEKILEHIEKLENGQFFESAQHYISHFYSNLSALTDYFTLPPLVILVEPGKIVESTKNSAFEIEETYKGLLEKGEVLPSVSEMYFTPFDILENLRKSKTVYISMLPRIPGEFEIGGLYSFQFRSVTSFHGKVDLLAEEVAHFKKKGYRVVILSGTGERGKHLSRTLREKALDAAFYGTLGDELLPGQVVITPGSLEKGFQIPEIKFALISDLDVYGQPKIKQKRPKVRAGGKRITSIDELSAGDYVVHITHGIGRYLGIETLEVEGHKKDYFAIQYAGGDKLYVPTDQVEMLHKYVGPEDRPPKLNKLGSSEWAKAKTRVKESVKEMAKELLELYAARQAMKGFAFSPDTVWQKEFEDLFPYEETPDQLTAIEEVKRDMESDKCMDRLLCGDVGYGKTEVALRAAFKAVMDAKQVAVLVPTTILAEQHYRTFSERFAPFPVRVEVISRFKSKAEQKAIIKDLKNGAIDIIIGTHRLLQKDVKFKDLGLLIIDEEQRFGVSHKEKIKQLKKNVDVLTMTATPIPRTLHMAMTGIRDMSVMETPPENRYPIQTYVVEYSDSLIRDAIMRELSRGGQVYYVYNRVNTIYEEAKRLSALVPEARIAVAHGQMHENELEEVMMDFYEHRYDVLVCTTIIETGLDIPNVNTLIVISADRFGLSQLYQLRGRVGRSSTQAFAYFTYKKDKTLSEAAEKRLAAIRDFTEFGAGFKIALRDLEIRGAGNILGTEQHGHMMTVGYDLYCKLLAEAVRELRSEPEPEEVQPVIDLKLSAYIGDDYIPNAAQKIDIYRRIAAVETLEEADDLEEEIEDRFGDIPEPTRNLLFVARLKVLAKKLKLSSIIQQNDIITFKFQSANALSPEQFFALSAAFQNRVNFLGTTVPAFTFKVRNLSGYKLFLRIQKLLEEMVEFLQLPSNE
SIO_010081: TOCE_RS00510
subclass of: SO_0000673
so part of: TOCE_RS00510
location: 102939..106472
location: region:102939-106472:1
so has part: feature:102939-106472:1:exon

WP_013274942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102939-106472:1:exon

TOCE_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: spoVT
locus tag: TOCE_RS00515
old locus tag: Toce_0100
so part of: sequence
location: 106541..107107
location: region:106541-107107:1
so has part: feature:106541-107107:1:exon
subclass of: SO_0000010

position:106541:1
position: 106541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107107:1
position: 107107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106541-107107:1:exon

TOCE_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: spoVT
locus tag: TOCE_RS00515
old locus tag: Toce_0100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777302.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stage V sporulation protein T
translation: MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFTDREGEVILKKYSPIGELAEFAKEYTEALHDSLGHIACIADRDAIIAVSGTPKKELMDKPLSSSMEAILEERKPVLIARTNEKEYVRITADDEDGKVRYTSQVIVPIIADGDPIGAVILLTKDPNVAMGELELKVAETAAGFLSRQMNIYQ
SIO_010081: TOCE_RS00515
subclass of: SO_0000673
so part of: TOCE_RS00515
location: 106541..107107
location: region:106541-107107:1
so has part: feature:106541-107107:1:exon

WP_013274943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106541-107107:1:exon

TOCE_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: pckA
locus tag: TOCE_RS00520
old locus tag: Toce_0101
so part of: sequence
location: complement(107171..108739)
location: region:107171-108739:-1
so has part: feature:107171-108739:-1:exon
subclass of: SO_0000010

position:107171:-1
position: 107171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108739:-1
position: 108739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107171-108739:-1:exon

TOCE_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: pckA
locus tag: TOCE_RS00520
old locus tag: Toce_0101
EC number: 4.1.1.49
inference: COORDINATES: protein motif:HMM:TIGR00224.1
GO function: GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate carboxykinase (ATP)
translation: MDNLKFPLLANLRKVHFNLPVPRLVEEAVTRGEGVLASNGALIVRTGKYTGRSPNDKFIVDEPSVRDEIWWGNNRPFPPDKFDALLRRMAAYLQNRDVFVFDGFVGADPKYRMPLRVVTEYAYQNFFSRQLFIRASGEELKDFQPEITVISAPGFKAQPEIDGTNSEAFIILSLEKRMVLIGGTFYSGEIKKSVFTLLNYIMPKAGVLSMHCSANMGRDGSTALFFGLSGTGKTTLSADPERLLIGDDEHGWSNEGIFNFEGGCYAKCINLSREMEPQIYDAIKFGAVLENVVYDEATREPDYKSDAITENTRAAYPVDYIPGAVIPGIGGHPRTVIFLTADAFGVLPPIARLSIEQATYYFISGYTSKLAGTERGITEPQATFSACFGAPFLPLSPITYAELLGEKIKKYKAEVFLVNTGWSGGPYGVGQRMELTYTRAMVRAALSGKLSDIEYEQDPVFGLMIPRACPGVPPEILNPKNTWHDKKAYDETVRKLARNFADNFKKFSSQWPHAAAAGPRLV
SIO_010081: TOCE_RS00520
subclass of: SO_0000673
so part of: TOCE_RS00520
location: complement(107171..108739)
location: region:107171-108739:-1
so has part: feature:107171-108739:-1:exon

WP_013274944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107171-108739:-1:exon

TOCE_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00530
old locus tag: Toce_0102
so part of: sequence
location: 109056..110663
location: region:109056-110663:1
so has part: feature:109056-110663:1:exon
subclass of: SO_0000010

position:109056:1
position: 109056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110663:1
position: 110663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109056-110663:1:exon

TOCE_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00530
old locus tag: Toce_0102
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777304.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide biosynthesis protein
translation: MTEKRNSFLKGAIILTAAGFLVKILGAVYRIPLAMMIKDEGMGLYQMAYPIYVTLLAVSTAGLPTAISKMVAGDVAVKRYRNAYKVFKVSLIILTLVGAVLTVALMLSARVLSEKVLGNPKAFYPLISISPAIFFVSVMSCFRGFFQGMQDMTPSAMSQIIEQVGRVVTVFVLATLLLPKGVEYAAAGAAFGPVVGAIAGLLLLVAVYRKRKRDLFDSFGAGSDAELENPVHIAWRLFAFAIPITLGGLIIPVMNLADAAIVTRRLQDAGFSVTRATELYGQLTGMAAPLINLPAVMTMSLAASLVPAISEAVALKNARMVASRAETAVRVTFMFALPAAMGLFILAEPVSEMLYKNPQAGIPLSILSWGIIFLALQQTTTGVLQGMGKTGIPVTNLAVGALFKVFLNYTLTAIPVINIKGAALGTVVGYLISSLLNFVSSMKWTGMALDVKRMIVKPLLATAVMGGVVYYCYEAMSAAGTGNSAATLAAVGMGAFIYPLLLLAMGGLGEEELSLIPGGSRVIRWLQKMGVIRRR
SIO_010081: TOCE_RS00530
subclass of: SO_0000673
so part of: TOCE_RS00530
location: 109056..110663
location: region:109056-110663:1
so has part: feature:109056-110663:1:exon

WP_013274945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109056-110663:1:exon

TOCE_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: mazG
locus tag: TOCE_RS00535
old locus tag: Toce_0103
so part of: sequence
location: 110671..111456
location: region:110671-111456:1
so has part: feature:110671-111456:1:exon
subclass of: SO_0000010

position:110671:1
position: 110671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111456:1
position: 111456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110671-111456:1:exon

TOCE_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: mazG
locus tag: TOCE_RS00535
old locus tag: Toce_0103
EC number: 3.6.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777305.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside triphosphate pyrophosphohydrolase
translation: MRYSMKDLINIMARLRGEHGCPWDKAQTHETLKPFLLEEAYEVIDAIDGGDPGELSEELGDLLLQIVFHSRIAEENGRFCFDDVVDGICKKMVRRHPHIFGDLKVSGTADVLKNWEDIKKEEKEVKSYAETMDKVPETFPALMRAYKVQEKAARVGFDWENVDGALEKVYEELQELKEVYKSGNGEKIREEIGDLLFAVVNVARFLSVNPELALREATRKFIRRFKYVEEAATKIDKKLHEMTLEDMDRLWNEGKIKEKKL
SIO_010081: TOCE_RS00535
subclass of: SO_0000673
so part of: TOCE_RS00535
location: 110671..111456
location: region:110671-111456:1
so has part: feature:110671-111456:1:exon

WP_013274946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110671-111456:1:exon

TOCE_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00540
old locus tag: Toce_0104
so part of: sequence
location: 111544..111819
location: region:111544-111819:1
so has part: feature:111544-111819:1:exon
subclass of: SO_0000010

position:111544:1
position: 111544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111819:1
position: 111819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111544-111819:1:exon

TOCE_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00540
old locus tag: Toce_0104
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777306.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0030261 - chromosome condensation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MNKAELVSVMAEKSGLTKKDSEKALNAFIEAVSEALSKRDKVQLVGFGTFEVRERSQRKGRNPQTGEEIDIPAASIPAFKAGKALKDSINK
SIO_010081: TOCE_RS00540
subclass of: SO_0000673
so part of: TOCE_RS00540
location: 111544..111819
location: region:111544-111819:1
so has part: feature:111544-111819:1:exon

WP_013274947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111544-111819:1:exon

TOCE_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00545
old locus tag: Toce_0105
so part of: sequence
location: 111951..112922
location: region:111951-112922:1
so has part: feature:111951-112922:1:exon
subclass of: SO_0000010

position:111951:1
position: 111951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112922:1
position: 112922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111951-112922:1:exon

TOCE_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00545
old locus tag: Toce_0105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777308.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SpoIID/LytB domain-containing protein
translation: MRHKILKVQALIIIVAILLSGCAVRRPDDKKPLVPKIPDKISRGEGREPQLTVYEVQTKTRKKMNLEDYVAGVVAGEMENNWPVEALAAQAILARTYVLEFVTDKGESKYGDADISTDFEEAQAWNPSKINDRVKKAVQMTRGKVITYRGKYVKAWFHSHSGGMTATPKEGLNYKEEEPPYITIVKSPDENAGPEGKRTWSATFTKEELRRAIKEKLGQDTGSIDEVSVVERGPSGRATKIKIGNATVPAPDLRTALDPMRMRSTLLTSLRIEGEKVIMEGKGFGHGVGLSQWGAHVLARQGKSPEEIIKYYFKGVDIVKLWD
SIO_010081: TOCE_RS00545
subclass of: SO_0000673
so part of: TOCE_RS00545
location: 111951..112922
location: region:111951-112922:1
so has part: feature:111951-112922:1:exon

WP_013274948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111951-112922:1:exon

TOCE_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: yabP
locus tag: TOCE_RS00550
old locus tag: Toce_0106
so part of: sequence
location: 112992..113273
location: region:112992-113273:1
so has part: feature:112992-113273:1:exon
subclass of: SO_0000010

position:112992:1
position: 112992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113273:1
position: 113273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112992-113273:1:exon

TOCE_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: yabP
locus tag: TOCE_RS00550
old locus tag: Toce_0106
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777309.1
GO component: GO:0005575 - cellular_component [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sporulation protein YabP
translation: MDEKKSTKHRLTLQDREILEIDGVLNVEKFTDEDIILSTEKGMLNIKGEKMHMKQLNLDQGLIVVEGFVKMLAYTEEASAAEKGKGLLNRLFR
SIO_010081: TOCE_RS00550
subclass of: SO_0000673
so part of: TOCE_RS00550
location: 112992..113273
location: region:112992-113273:1
so has part: feature:112992-113273:1:exon

WP_013274949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112992-113273:1:exon

TOCE_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: yabQ
locus tag: TOCE_RS00555
old locus tag: Toce_0107
so part of: sequence
location: 113304..113741
location: region:113304-113741:1
so has part: feature:113304-113741:1:exon
subclass of: SO_0000010

position:113304:1
position: 113304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113741:1
position: 113741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113304-113741:1:exon

TOCE_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: yabQ
locus tag: TOCE_RS00555
old locus tag: Toce_0107
inference: COORDINATES: protein motif:HMM:TIGR02893.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spore cortex biosynthesis protein YabQ
translation: MNTVEVDTQLIFLAGALASGAVAGLAFDVYRRLRNYWRPGPFLTALGDLAYWALTAAITFYVTYRINYGQVRGYLFLGFGVGLLLYITAVSPRVIRIFLILERTFSKIFILPGKVFRRITGFKAVRLVKRILSDARRVFSKIKKG
SIO_010081: TOCE_RS00555
subclass of: SO_0000673
so part of: TOCE_RS00555
location: 113304..113741
location: region:113304-113741:1
so has part: feature:113304-113741:1:exon

WP_013274950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113304-113741:1:exon

TOCE_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00560
old locus tag: Toce_0108
so part of: sequence
location: 113805..114092
location: region:113805-114092:1
so has part: feature:113805-114092:1:exon
subclass of: SO_0000010

position:113805:1
position: 113805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114092:1
position: 114092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113805-114092:1:exon

TOCE_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00560
old locus tag: Toce_0108
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777311.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septum formation initiator family protein
translation: MGGKKQFKLGRIIFVLFLVYFVYTFTVQQFKINELRRQELELSQKMNQLAEERKRLEKEIELLNTKSYIEKLARDQLGLVKPGEILYKISPSRDD
SIO_010081: TOCE_RS00560
subclass of: SO_0000673
so part of: TOCE_RS00560
location: 113805..114092
location: region:113805-114092:1
so has part: feature:113805-114092:1:exon

WP_013274951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113805-114092:1:exon

TOCE_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00565
old locus tag: Toce_0109
so part of: sequence
location: 114171..114548
location: region:114171-114548:1
so has part: feature:114171-114548:1:exon
subclass of: SO_0000010

position:114171:1
position: 114171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114548:1
position: 114548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114171-114548:1:exon

TOCE_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00565
old locus tag: Toce_0109
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777312.1
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S1 RNA-binding domain-containing protein
translation: MPVDVGQIVEGKVTGITRFGAFVELPDGATGLVHISEVADGYVKDVRDYLNCNDVVKVKVIAISEDGKISLSIRKTRENQRHRRMNNLSFEEKLARFLKESEERQQDLKRYESKKGSGGYKRRAY
SIO_010081: TOCE_RS00565
subclass of: SO_0000673
so part of: TOCE_RS00565
location: 114171..114548
location: region:114171-114548:1
so has part: feature:114171-114548:1:exon

WP_013274952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114171-114548:1:exon

TOCE_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00570
old locus tag: Toce_0110
so part of: sequence
location: 114645..115556
location: region:114645-115556:1
so has part: feature:114645-115556:1:exon
subclass of: SO_0000010

position:114645:1
position: 114645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115556:1
position: 115556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114645-115556:1:exon

TOCE_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00570
old locus tag: Toce_0110
inference: COORDINATES: protein motif:HMM:NF014587.2
GO function: GO:0000166 - nucleotide binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ppx/GppA phosphatase family protein
translation: MKAAVIDLGSNSVRLLVAEVGGGKVTPVLKDLVTTRLGEGVADKGMLSQKSMDSTLEAVIEFKKRALSAGCERITAIATSAVREAKNGWEFMELIKQRAGIEVRILSGREEGELSFLGAKEGLGLKERALVIDIGGGSTELAFGCEKVQLSVSLPMGAVRWTRSFLKSDPPEAKEITALREEARSLLSDFKNRFESMKSPGGVTAVGVGGTLTSLAAISLELKEYHWSKVHGCVLALKAMEEIAGRLCRLPSPKRKEIAGLAADRADIIPAGALIALEIMRFLELGSITVSESDLMEGILLTN
SIO_010081: TOCE_RS00570
subclass of: SO_0000673
so part of: TOCE_RS00570
location: 114645..115556
location: region:114645-115556:1
so has part: feature:114645-115556:1:exon

WP_013274953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114645-115556:1:exon

TOCE_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rpoB
locus tag: TOCE_RS00575
old locus tag: Toce_0111
so part of: sequence
location: 115714..119382
location: region:115714-119382:1
so has part: feature:115714-119382:1:exon
subclass of: SO_0000010

position:115714:1
position: 115714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119382:1
position: 119382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115714-119382:1:exon

TOCE_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rpoB
locus tag: TOCE_RS00575
old locus tag: Toce_0111
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014525059.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta
translation: MVYFYFYKGVKERMVRPVKVGGRTRWSFAKIEEVRDLPYLLEIQKNSYEWFLKEGLREVLQEFSPIEDFTGNMVLEFLDYSLDNNPKYSVDECKERDVTYAVPLKVRVRLINKETGEVKEQDVFMGDFPLMTENGTFIINGAERVIVSQLVRSPGVYFDRQIDKNGRALYMGTIIPNRGAWLEMETDSNEVIYVRVDRTRKIPITVLLRALGYGTNAQIIELLGEDEKILRTLEKDNTENQEEALLEIYKRLRPGEPPTVENARALLESLFFDPKRYDLANVGRYKFNKKLRLRNRIVGKIAAENVEDPNTGEIILKKGEKITRKTAETLESLRINEIKVMVDEDRVVKVIANGYNDGDGPDVFPTEKYITVEDIVASINYLLNLSYGIGDVDDIDHLGNRRVRSVGELLQNQFRIGLARMERVVKERMTIQDVDAITPQGLINIRPLVAAIKEFFGSSQLSQFMDQTNPLAELTNKRRLSALGPGGLSRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLISSLSTYARVNQYGFIETPYRKVDKERGVVTNEVEYLTADEEEEFIIAQANVPLDEEGRFVQKRVTARYKDDIVVVPAEEVDYMDVSPKQLVSVATALIPFLEHDDANRALMGANMQRQAVPLITTEAPLVGTGIEWKAALDSGVMIVAKNSGVVERVTAREIVIRRDSDNGLDVYKVHKFMRSNQGTCINQRPIVKKGDRVEAGQPIADGPSTDHGELALGKNVLVAFMPWEGYNYEDAILISERLVRDDVFTSIHIEQYEAEARDTKLGPEEITRDIPNVGEDALKDLDERGIIRIGAEVRAGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRVPHGEYGIVVDVKVFSRENGDELPPGVNQLVRVYIAQKRKISEGDKMAGRHGNKGVISRILPVEDMPYLPDGTPVDIVLNPLGVPSRMNIGQVLETHLGWAAKALGWHVATPVFDGATEEEIFECLRKAGLPEDGKIELRDGRTGEPFDKKVTVGYMYMLKLAHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYTLQELLTVKSDDVMGRVKTYEAIVKGENVPEPGIPESFKVLIKELQSLCLDVKILSEDAQEIEIKDADEYEETETLDVNMEGLEDQGETPVKEEEPDEDLEEEEPEEDIYEELSEEDRELTRDLGLDEEDFNGQFDFDESEIEDY
SIO_010081: TOCE_RS00575
subclass of: SO_0000673
so part of: TOCE_RS00575
location: 115714..119382
location: region:115714-119382:1
so has part: feature:115714-119382:1:exon

WP_245523132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115714-119382:1:exon

TOCE_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rpoC
locus tag: TOCE_RS00580
old locus tag: Toce_0112
so part of: sequence
location: 119461..123015
location: region:119461-123015:1
so has part: feature:119461-123015:1:exon
subclass of: SO_0000010

position:119461:1
position: 119461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123015:1
position: 123015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119461-123015:1:exon

TOCE_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rpoC
locus tag: TOCE_RS00580
old locus tag: Toce_0112
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020808074.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta'
translation: MLELNFFDSIKIGLASPEQIREWSKGEVKKPETINYRTLKPEKQGLFCERIFGPVKDWECHCGKYKRVKYKGVICDRCGVEVTKSKVRRERMGHIELAAPVSHIWFLKGIPSRIGLMLDMSPRSLEKVIYFASYIVIDPGNTPLAKKQLLTEKEYREYREKYGNAFRAGMGAEAIKELLEEIDLEKLSKELRAELKEANGQKKVRILRRLEVVEAFRKSGNRPEWMILEVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLYQCGLPKEMALELFKPFVMKKLVEDGHAHNIKSAKRMVERVKPEVWDVLEEVIKEHPVLLNRAPTLHRLGIQAFEPVLVEGRAIQIHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLSTNNMLKPADGKPVVTPTQDMVLGAYYLTIERDGEKGEGKYFSSPEEVLLAYSMGEVSLHAKINVRITKEIDGKKRSKIVKTTPGRIIFNECIPQDLGFVDRTKEENLFEPELNTLVDKGKLAEIVERCYKKHGTTVTAQVLDRIKATGFHYATKAGITIGITDIEIPADKEKILSEAEEKVDQVELMYRRGLISDEERYEKVIEIWADATERVTESLMNSLDRLNPVYMMANSGARGNKQQIRQLAGMRGLMADTAGRIIDLPIKANFREGLTVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRELDCGTTEGITVRAIMDGKEVIEPLKERIDGRYALEDVVDPNTGEVLVRADEMITDTIADRIIAAGIKEVKIRSVLTCRTRHGVCAKCYGKNLATGRPVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGIAGHDITQGLPRVEELFEARRPKGQAVITENSGIVRILDTKKKREVEVTSDDGEIRVYQIPYGARLTVENGSRVEAGDSLCEGPINPHDILRIKGVRGVQTYLLQEVLKVYRMQGVDINDKHIEIIIRQMLRKVKVEDPGDTELLPGELIDIFEFEEINERAKQEGRKPAEARRVLLGITKASLATDSFLSAASFQETTRVLTEAAIKGKVDPLLGLKENVIIGKLIPAGTGMKRYRGIKIYVEGQEPGAENQPPAEGANAPEEA
SIO_010081: TOCE_RS00580
subclass of: SO_0000673
so part of: TOCE_RS00580
location: 119461..123015
location: region:119461-123015:1
so has part: feature:119461-123015:1:exon

WP_013274955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119461-123015:1:exon

TOCE_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00585
old locus tag: Toce_0113
so part of: sequence
location: 123107..123355
location: region:123107-123355:1
so has part: feature:123107-123355:1:exon
subclass of: SO_0000010

position:123107:1
position: 123107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123355:1
position: 123355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123107-123355:1:exon

TOCE_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00585
old locus tag: Toce_0113
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777316.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosomal L7Ae/L30e/S12e/Gadd45 family protein
translation: MLNKLKSAPKKTVGTKQTLKAVERDQAAVVFIAQDAEEHVVSGLKELCQQKGVEVVPVATMKELGEACGIDVGAASAAILNQ
SIO_010081: TOCE_RS00585
subclass of: SO_0000673
so part of: TOCE_RS00585
location: 123107..123355
location: region:123107-123355:1
so has part: feature:123107-123355:1:exon

WP_013274956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123107-123355:1:exon

TOCE_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rpsL
locus tag: TOCE_RS00590
old locus tag: Toce_0114
so part of: sequence
location: 123418..123792
location: region:123418-123792:1
so has part: feature:123418-123792:1:exon
subclass of: SO_0000010

position:123418:1
position: 123418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123792:1
position: 123792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123418-123792:1:exon

TOCE_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rpsL
locus tag: TOCE_RS00590
old locus tag: Toce_0114
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S12
translation: MPTINQLVRRGRQKVQHKSKSPALKGCPQKRGVCTVVKTTTPKKPNSALRKIARVRLTNGVEVTAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIIRGALDAAGVANRKQGRSLYGAKKPKS
SIO_010081: TOCE_RS00590
subclass of: SO_0000673
so part of: TOCE_RS00590
location: 123418..123792
location: region:123418-123792:1
so has part: feature:123418-123792:1:exon

WP_013274957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123418-123792:1:exon

TOCE_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rpsG
locus tag: TOCE_RS00595
old locus tag: Toce_0115
so part of: sequence
location: 123810..124283
location: region:123810-124283:1
so has part: feature:123810-124283:1:exon
subclass of: SO_0000010

position:123810:1
position: 123810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124283:1
position: 124283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123810-124283:1:exon

TOCE_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rpsG
locus tag: TOCE_RS00595
old locus tag: Toce_0115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S7
translation: MPRKGHVARRDVPEDPIYKSKLVTKLINKLMYDGKKSVAQKACYGAFEIIREKTGKDPLEVFQEALKNVMPVLEVRPRRVGGATYQVPIEVPEHRRLSLGIRWLVEYARQRTDKKTIREKLAAEIMDAANGTGGAVKKKDETHRMAEANRAFAHYRW
SIO_010081: TOCE_RS00595
subclass of: SO_0000673
so part of: TOCE_RS00595
location: 123810..124283
location: region:123810-124283:1
so has part: feature:123810-124283:1:exon

WP_013274958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123810-124283:1:exon

TOCE_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: fusA
locus tag: TOCE_RS00600
old locus tag: Toce_0116
so part of: sequence
location: 124342..126408
location: region:124342-126408:1
so has part: feature:124342-126408:1:exon
subclass of: SO_0000010

position:124342:1
position: 124342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126408:1
position: 126408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124342-126408:1:exon

TOCE_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: fusA
locus tag: TOCE_RS00600
old locus tag: Toce_0116
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777319.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor G
translation: MPRQIPLDRLRNIGIMAHIDAGKTTTTERILFYTGKVHKLGEVHEGTAVMDWMEQEQERGITITSASTTCYWKDHQINIIDTPGHVDFTVEVERSLRVLDGAVAVFCAKGGVEPQSETVWRQADKYMVPRIAYVNKMDIMGADFYNVIKQIKERLGANPVPVQIPIGSEDTFRGIVDLVGMKAYIYTNDLGTDIQVTEIPDEIRDKAEEYREKMLESLSDVNEEIMEKFLEGQEISEAELKAAIRKACVEVKAVPVLCGSSYRNKGVQLLLDAIIDYLPSPLDIPAVKGIDPETGEEIERQPSDDEPFSALAFKIMSDPYVGKLTYFRIYSGTLKAGSYVYNSTKNKKERIGRILRMHANHRQEMEEAMTGEIVAAVGLKDTTTGDTLCAEEKPIVLESMQFPEPVISVAIEPKTKADQEKMGIALQRLAEEDPTFRTYTDQETGQTIISGMGELHLEIIVDRMFREFKVQANVGKPQVAYKETIRKAVKAEGKYIRQTGGRGQYGHVWLEIEPLEPGKGYEFVNKIVGGVIPKEYIPAVDAGVREALQNGVLAGYPVVDVKVTLFDGSYHEVDSSEMAFKIAASMAFKEAMKKAEPVLLEPIMKVEVTVPEEYMGDVIGDLNSRRGHIEGIEPRSGAQVVRGYVPLAEMFGYATDLRSKTQGRGTYVMQFSHYAEVPKNIAESIINK
SIO_010081: TOCE_RS00600
subclass of: SO_0000673
so part of: TOCE_RS00600
location: 124342..126408
location: region:124342-126408:1
so has part: feature:124342-126408:1:exon

WP_013274959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124342-126408:1:exon

TOCE_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: tuf
locus tag: TOCE_RS00605
old locus tag: Toce_0117
so part of: sequence
location: 126428..127630
location: region:126428-127630:1
so has part: feature:126428-127630:1:exon
subclass of: SO_0000010

position:126428:1
position: 126428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127630:1
position: 127630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126428-127630:1:exon

TOCE_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: tuf
locus tag: TOCE_RS00605
old locus tag: Toce_0117
inference: COORDINATES: similar to AA sequence:RefSeq:YP_499102.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor Tu
translation: MAKQKFERTKPHVNVGTIGHVDHGKTTLTAAITRTLSSSGLANFVAYDQIDKAPEERERGITIATAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLELVEMEVRELLSSYEFPGDEIPVVAGSALKALECGCGKRECEWCGKIWQLMDAVDEYIPTPERDADKPFLMPVEDVFTITGRGTVVTGRVERGTLKVGDEVEIVGLAPEKKKTVVTGVEMFRKILDQAVAGDNIGALLRGVDRDEVERGMVIAKPGSIHPHTKFKGQVYVLKKEEGGRHTPFFNGYRPQFYFRTTDVTGVIKLPEGTEMVMPGDNVVMEIELIAPIAIEEGLRFAIREGGRTVGAGVVTEIIE
SIO_010081: TOCE_RS00605
subclass of: SO_0000673
so part of: TOCE_RS00605
location: 126428..127630
location: region:126428-127630:1
so has part: feature:126428-127630:1:exon

WP_013274960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126428-127630:1:exon

TOCE_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rpsJ
locus tag: TOCE_RS00610
old locus tag: Toce_0118
so part of: sequence
location: 127672..127980
location: region:127672-127980:1
so has part: feature:127672-127980:1:exon
subclass of: SO_0000010

position:127672:1
position: 127672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127980:1
position: 127980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127672-127980:1:exon

TOCE_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rpsJ
locus tag: TOCE_RS00610
old locus tag: Toce_0118
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012084982.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S10
translation: MARQKIRIRLKSYDSGILDQSAQKIVETAKRTGAKVSGPIPLPTDRTLITILRAPHKYKDSREQFETRTHKRLIDIHEPTPKTVDALMRLDLPAGVDIEIKL
SIO_010081: TOCE_RS00610
subclass of: SO_0000673
so part of: TOCE_RS00610
location: 127672..127980
location: region:127672-127980:1
so has part: feature:127672-127980:1:exon

WP_013274961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127672-127980:1:exon

TOCE_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rplC
locus tag: TOCE_RS00615
old locus tag: Toce_0119
so part of: sequence
location: 128004..128633
location: region:128004-128633:1
so has part: feature:128004-128633:1:exon
subclass of: SO_0000010

position:128004:1
position: 128004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128633:1
position: 128633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128004-128633:1:exon

TOCE_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rplC
locus tag: TOCE_RS00615
old locus tag: Toce_0119
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001748078.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L3
translation: MAGKAILGIKLGMTQIFDEAGQAVPVTVVEAGPCVVMQKKTPEIDGYSALKVGFVDVKEHRLTKPVLGQFRKYQLKPKKYIRELKIDEVDKYNVGDEIKVDIFKPGERVDVTGISIGKGFAGGVKRWNFNRGPMSHGSMYHRRPGSGGATDPERVFKGKKMPGHLGHERVTVQNLEIVKVDPERNLLLIKGSVPGTKKSLLYIKSTVKS
SIO_010081: TOCE_RS00615
subclass of: SO_0000673
so part of: TOCE_RS00615
location: 128004..128633
location: region:128004-128633:1
so has part: feature:128004-128633:1:exon

WP_013274962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128004-128633:1:exon

TOCE_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rplD
locus tag: TOCE_RS00620
old locus tag: Toce_0120
so part of: sequence
location: 128661..129287
location: region:128661-129287:1
so has part: feature:128661-129287:1:exon
subclass of: SO_0000010

position:128661:1
position: 128661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129287:1
position: 129287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128661-129287:1:exon

TOCE_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rplD
locus tag: TOCE_RS00620
old locus tag: Toce_0120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777323.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L4
translation: MPKVALYNMQGQQVGEVELSDSVFGVEVKPEVMHQVVLNYLANQRVGTASTKTRAEVRGGGRKPWRQKGTGRARHGSIRSPLWRKGGIVFGPKPRSYKYTLPKKLKRLALKSALSAKVRDNEIIVLDRLTMEAPKTKEMVKVLSNLKADTKSLIVLDASDVNVVKSARNIPGVTTTTVNTLNVYDILNHDKLIMTMDAVKRVEEVYAG
SIO_010081: TOCE_RS00620
subclass of: SO_0000673
so part of: TOCE_RS00620
location: 128661..129287
location: region:128661-129287:1
so has part: feature:128661-129287:1:exon

WP_013274963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128661-129287:1:exon

TOCE_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rplW
locus tag: TOCE_RS00625
old locus tag: Toce_0121
so part of: sequence
location: 129284..129574
location: region:129284-129574:1
so has part: feature:129284-129574:1:exon
subclass of: SO_0000010

position:129284:1
position: 129284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129574:1
position: 129574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129284-129574:1:exon

TOCE_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rplW
locus tag: TOCE_RS00625
old locus tag: Toce_0121
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777324.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L23
translation: MKDPHDIIIRPWITEKSMAMKENRKYTFVVHPDANKTEIKNAVEAIFGVKVEKVNTMNMRGKKKRMGLSEGKRPDWKKAIVTLKKDSKAIEFFESL
SIO_010081: TOCE_RS00625
subclass of: SO_0000673
so part of: TOCE_RS00625
location: 129284..129574
location: region:129284-129574:1
so has part: feature:129284-129574:1:exon

WP_013274964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129284-129574:1:exon

TOCE_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rplB
locus tag: TOCE_RS00630
old locus tag: Toce_0122
so part of: sequence
location: 129611..130438
location: region:129611-130438:1
so has part: feature:129611-130438:1:exon
subclass of: SO_0000010

position:129611:1
position: 129611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130438:1
position: 130438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129611-130438:1:exon

TOCE_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rplB
locus tag: TOCE_RS00630
old locus tag: Toce_0122
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777325.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L2
translation: MGIKKFKPTSPGIRFMTVSTFEEITKKEPEKSLVEILKSKAGRNAQGRITARHRGGGHKRKYRIIDFKRDKDGVPAKVAAIEYDPNRSARIALLHYRDGEKRYILAPVGLKVGDIVESGPNADIKPGNALPLASIPVGTIVHNVELYPGKGGQLVRAAGAAAQLMAKENGLATLRLPSGEMRMVPVECRATVGQVGNLEHENISIGKAGRSRWLGRRPHVRGSAMNPIDHPHGGGEGKAPIGRKHPVTPWGKPTLGYKTRKKNKPSDKFIVKRRK
SIO_010081: TOCE_RS00630
subclass of: SO_0000673
so part of: TOCE_RS00630
location: 129611..130438
location: region:129611-130438:1
so has part: feature:129611-130438:1:exon

WP_013274965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129611-130438:1:exon

TOCE_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rpsS
locus tag: TOCE_RS00635
old locus tag: Toce_0123
so part of: sequence
location: 130460..130744
location: region:130460-130744:1
so has part: feature:130460-130744:1:exon
subclass of: SO_0000010

position:130460:1
position: 130460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130744:1
position: 130744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130460-130744:1:exon

TOCE_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rpsS
locus tag: TOCE_RS00635
old locus tag: Toce_0123
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011393933.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S19
translation: MGRSVKKGPFVDPKLLKKIRAMNEKREKKVIKTWSRDSTIIPEMVGHTIAVHDGRKHVPVYITEDMVGHKLGEFAPTRTFRGHGDHTEKSTALK
SIO_010081: TOCE_RS00635
subclass of: SO_0000673
so part of: TOCE_RS00635
location: 130460..130744
location: region:130460-130744:1
so has part: feature:130460-130744:1:exon

WP_013274966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130460-130744:1:exon

TOCE_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rplV
locus tag: TOCE_RS00640
old locus tag: Toce_0124
so part of: sequence
location: 130770..131108
location: region:130770-131108:1
so has part: feature:130770-131108:1:exon
subclass of: SO_0000010

position:130770:1
position: 130770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131108:1
position: 131108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130770-131108:1:exon

TOCE_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rplV
locus tag: TOCE_RS00640
old locus tag: Toce_0124
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001148024.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L22
translation: MEARAQARYVRIAPRKVRIVLDLIRGKKLDEALSILQFTPKRASKIVEKLIRSAAANAENNHNMNPDALYVYKCYADQGPTLKRFRARAMGRAAMIRKRTSHITVVLREKEG
SIO_010081: TOCE_RS00640
subclass of: SO_0000673
so part of: TOCE_RS00640
location: 130770..131108
location: region:130770-131108:1
so has part: feature:130770-131108:1:exon

WP_013274967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130770-131108:1:exon

TOCE_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rpsC
locus tag: TOCE_RS00645
old locus tag: Toce_0125
so part of: sequence
location: 131112..131804
location: region:131112-131804:1
so has part: feature:131112-131804:1:exon
subclass of: SO_0000010

position:131112:1
position: 131112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131804:1
position: 131804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131112-131804:1:exon

TOCE_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rpsC
locus tag: TOCE_RS00645
old locus tag: Toce_0125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777328.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S3
translation: MGQKVHPHGLRIGIIRDWDSRWYSEKNFADLVLEDFNIRKHIKNKFYTAGISRVEIERAANRIKVTIHTAKPGMVIGKGGAGVEELRKDLEAMTGKQISINVIEIKNPDVEAQLVAENIAAQIERRISYRRAMKQAIARALKAGAKGIKTMVSGRLAGAEIARTEWYREGTIPLQKLRADISYGFAEAHTTYGRIGVKVWIYRGDVLPTRKQEKQVEGGEANVNAEAGQI
SIO_010081: TOCE_RS00645
subclass of: SO_0000673
so part of: TOCE_RS00645
location: 131112..131804
location: region:131112-131804:1
so has part: feature:131112-131804:1:exon

WP_013274968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131112-131804:1:exon

TOCE_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rplP
locus tag: TOCE_RS00650
old locus tag: Toce_0126
so part of: sequence
location: 131776..132210
location: region:131776-132210:1
so has part: feature:131776-132210:1:exon
subclass of: SO_0000010

position:131776:1
position: 131776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132210:1
position: 132210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131776-132210:1:exon

TOCE_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rplP
locus tag: TOCE_RS00650
old locus tag: Toce_0126
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011375443.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L16
translation: MLMPKRVKYRKQQRGTIRGKATRGTEVTYGEYGLQALEPAWITSSQIEAARIAITRYIKRGGKVWIKIFPDKPVTKKPAETRMGSGKGSPEYWVAVVKPGRVLFELAGVSEEVAKEALTLASHKLPIKTKIVKREGLGGDENEG
SIO_010081: TOCE_RS00650
subclass of: SO_0000673
so part of: TOCE_RS00650
location: 131776..132210
location: region:131776-132210:1
so has part: feature:131776-132210:1:exon

WP_013274969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131776-132210:1:exon

TOCE_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rpmC
locus tag: TOCE_RS00655
old locus tag: Toce_0127
so part of: sequence
location: 132200..132397
location: region:132200-132397:1
so has part: feature:132200-132397:1:exon
subclass of: SO_0000010

position:132200:1
position: 132200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132397:1
position: 132397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132200-132397:1:exon

TOCE_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rpmC
locus tag: TOCE_RS00655
old locus tag: Toce_0127
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006784438.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L29
translation: MKAKQIRELSDQELVQKLKDLKGELFNLRFQSATGQLDNPKRIREVRKTIARIKTILTERERARA
SIO_010081: TOCE_RS00655
subclass of: SO_0000673
so part of: TOCE_RS00655
location: 132200..132397
location: region:132200-132397:1
so has part: feature:132200-132397:1:exon

WP_013274970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132200-132397:1:exon

TOCE_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rpsQ
locus tag: TOCE_RS00660
old locus tag: Toce_0128
so part of: sequence
location: 132428..132685
location: region:132428-132685:1
so has part: feature:132428-132685:1:exon
subclass of: SO_0000010

position:132428:1
position: 132428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132685:1
position: 132685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132428-132685:1:exon

TOCE_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rpsQ
locus tag: TOCE_RS00660
old locus tag: Toce_0128
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016660790.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S17
translation: MEERPKRKVRTGVVVSNKMDKTIVVAVETLVRHPLYGKTIKRTKKFKAHDENNQCQIGDVVKIMETRPLSKTKRWRLLEIVKRAE
SIO_010081: TOCE_RS00660
subclass of: SO_0000673
so part of: TOCE_RS00660
location: 132428..132685
location: region:132428-132685:1
so has part: feature:132428-132685:1:exon

WP_013274971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132428-132685:1:exon

TOCE_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rplN
locus tag: TOCE_RS00665
old locus tag: Toce_0129
so part of: sequence
location: 132711..133079
location: region:132711-133079:1
so has part: feature:132711-133079:1:exon
subclass of: SO_0000010

position:132711:1
position: 132711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133079:1
position: 133079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132711-133079:1:exon

TOCE_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rplN
locus tag: TOCE_RS00665
old locus tag: Toce_0129
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L14
translation: MIQVQTRLNVADNTGAKEIMCIRVLGGSNRKFAGIGDIIVASVKDAAPDGIVKKGDVVKAVIVRTKAPKRRPDGSYIKFDENAAVIINDDLNPRGTRIFGPVARELRDKNFMRIISLAPEVL
SIO_010081: TOCE_RS00665
subclass of: SO_0000673
so part of: TOCE_RS00665
location: 132711..133079
location: region:132711-133079:1
so has part: feature:132711-133079:1:exon

WP_013274972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132711-133079:1:exon

TOCE_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rplX
locus tag: TOCE_RS00670
old locus tag: Toce_0130
so part of: sequence
location: 133093..133416
location: region:133093-133416:1
so has part: feature:133093-133416:1:exon
subclass of: SO_0000010

position:133093:1
position: 133093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133416:1
position: 133416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133093-133416:1:exon

TOCE_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rplX
locus tag: TOCE_RS00670
old locus tag: Toce_0130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777333.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L24
translation: MAKVHVKKGDTVVVLSGKDRGKKGKVLKVLPKKGVAIVEGVNMATKHRRPSPKFPQGGIIHQEMPLNTSKLMVVCGKCGAPTRIGHTFLADGTKVRTCKKCGEVIDK
SIO_010081: TOCE_RS00670
subclass of: SO_0000673
so part of: TOCE_RS00670
location: 133093..133416
location: region:133093-133416:1
so has part: feature:133093-133416:1:exon

WP_013274973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133093-133416:1:exon

TOCE_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rplE
locus tag: TOCE_RS00675
old locus tag: Toce_0131
so part of: sequence
location: 133440..133979
location: region:133440-133979:1
so has part: feature:133440-133979:1:exon
subclass of: SO_0000010

position:133440:1
position: 133440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133979:1
position: 133979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133440-133979:1:exon

TOCE_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rplE
locus tag: TOCE_RS00675
old locus tag: Toce_0131
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016281718.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L5
translation: MPRLKEKYEKEVIPAMMNKFNYKNVMQVPRLEKVVLNMGISDAKENPKAVESATRDMAAIAGQKPVVTKARKSIASFKIRQGMPIGAKVTLRGDRMYEFLDKLFNVALPRVRDFKGVSPDAFDGRGNYTLGIKEQLIFPEIDYDKIDKIRGMDITIVTTAETDEEARELLKGLGMPFAR
SIO_010081: TOCE_RS00675
subclass of: SO_0000673
so part of: TOCE_RS00675
location: 133440..133979
location: region:133440-133979:1
so has part: feature:133440-133979:1:exon

WP_013274974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133440-133979:1:exon

TOCE_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00680
old locus tag: Toce_0132
so part of: sequence
location: 133995..134180
location: region:133995-134180:1
so has part: feature:133995-134180:1:exon
subclass of: SO_0000010

position:133995:1
position: 133995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134180:1
position: 134180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133995-134180:1:exon

TOCE_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00680
old locus tag: Toce_0132
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003948630.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type Z 30S ribosomal protein S14
translation: MAKKSLIAKQKRPQKFSTRYYNRCKICGRPRAYLRKFGVCRLCFRVLAHRGEIPGVRKASW
SIO_010081: TOCE_RS00680
subclass of: SO_0000673
so part of: TOCE_RS00680
location: 133995..134180
location: region:133995-134180:1
so has part: feature:133995-134180:1:exon

WP_013274975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133995-134180:1:exon

TOCE_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rpsH
locus tag: TOCE_RS00685
old locus tag: Toce_0133
so part of: sequence
location: 134206..134604
location: region:134206-134604:1
so has part: feature:134206-134604:1:exon
subclass of: SO_0000010

position:134206:1
position: 134206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134604:1
position: 134604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134206-134604:1:exon

TOCE_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rpsH
locus tag: TOCE_RS00685
old locus tag: Toce_0133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009754342.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S8
translation: MAITDPIADMLTRIRNANDAGHPTVEIPCSKIKRAIAETLKEEGFIQDYEVIEDGKQGIIKIHLKYGPNKEKVITGIKRISKPGLRIYVRKDQIPRVLGGLGIAILSTSKGIMTDKKARKEGVGGEVICYVW
SIO_010081: TOCE_RS00685
subclass of: SO_0000673
so part of: TOCE_RS00685
location: 134206..134604
location: region:134206-134604:1
so has part: feature:134206-134604:1:exon

WP_013274976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134206-134604:1:exon

TOCE_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rplF
locus tag: TOCE_RS00690
old locus tag: Toce_0134
so part of: sequence
location: 134629..135168
location: region:134629-135168:1
so has part: feature:134629-135168:1:exon
subclass of: SO_0000010

position:134629:1
position: 134629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135168:1
position: 135168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134629-135168:1:exon

TOCE_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rplF
locus tag: TOCE_RS00690
old locus tag: Toce_0134
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008372550.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L6
translation: MSRIGKKPIEIPKGVEVKIEGNIVTIKGPKGSITKEFHKDMQILQEDGKIIVKRPSDDKNHKALHGLTRSLLANMVNGVVNGYEKSLMLEGVGYRASKQGNKLVLTVGFSHPVEIEAPKGIEFEVPAQNKIIVRGIDKELVGITAANIRKVKEPEPYKGKGIRYENEVVRRKVGKAGAK
SIO_010081: TOCE_RS00690
subclass of: SO_0000673
so part of: TOCE_RS00690
location: 134629..135168
location: region:134629-135168:1
so has part: feature:134629-135168:1:exon

WP_013274977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134629-135168:1:exon

TOCE_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rplR
locus tag: TOCE_RS00695
old locus tag: Toce_0135
so part of: sequence
location: 135189..135554
location: region:135189-135554:1
so has part: feature:135189-135554:1:exon
subclass of: SO_0000010

position:135189:1
position: 135189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135554:1
position: 135554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135189-135554:1:exon

TOCE_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rplR
locus tag: TOCE_RS00695
old locus tag: Toce_0135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014215718.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L18
translation: MIKKEPRNLARKRRHLRIRKKVFGTAERPRLNVFRSLKHIYAQIINDEEGRTLVAASTLDPAIRDSVKGCNVEAAEKVGELIAKRALEKGITKVAFDRGGYLYHGRVKALAEAARRAGLEF
SIO_010081: TOCE_RS00695
subclass of: SO_0000673
so part of: TOCE_RS00695
location: 135189..135554
location: region:135189-135554:1
so has part: feature:135189-135554:1:exon

WP_013274978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135189-135554:1:exon

TOCE_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rpsE
locus tag: TOCE_RS00700
old locus tag: Toce_0136
so part of: sequence
location: 135572..136072
location: region:135572-136072:1
so has part: feature:135572-136072:1:exon
subclass of: SO_0000010

position:135572:1
position: 135572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136072:1
position: 136072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135572-136072:1:exon

TOCE_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rpsE
locus tag: TOCE_RS00700
old locus tag: Toce_0136
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002607433.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S5
translation: MQRERDIEHEFSEKVVTINRVSKVTKGGKNFRFSALVVVGNKNGKVGVGTGKAHEIPDAIRKAIEDAKKNLINVPVINGTIPHEAIGESGAGRVLVKPAVEGTGVIAGGPVRAVLELAGIRNVVSKSLGSSNAKNMVDATIEALKQLKSIEEVAKMRGKTVQELLG
SIO_010081: TOCE_RS00700
subclass of: SO_0000673
so part of: TOCE_RS00700
location: 135572..136072
location: region:135572-136072:1
so has part: feature:135572-136072:1:exon

WP_013274979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135572-136072:1:exon

TOCE_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rplO
locus tag: TOCE_RS00705
old locus tag: Toce_0137
so part of: sequence
location: 136099..136539
location: region:136099-136539:1
so has part: feature:136099-136539:1:exon
subclass of: SO_0000010

position:136099:1
position: 136099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136539:1
position: 136539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136099-136539:1:exon

TOCE_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rplO
locus tag: TOCE_RS00705
old locus tag: Toce_0137
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004225266.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L15
translation: MRLHDLKPAEGSRKRPKRVGRGIGSGHGKTSTRGHKGQNARSGGGVRPGFEGGQMPLYRRLPKRGFTNIFKKEYAIVNVKDLNVFEENTRVTPELLVEKGLIKQVKDGVKILGDGELKVKLEVVAHAFSGSAKEKIEAAGGKAEVI
SIO_010081: TOCE_RS00705
subclass of: SO_0000673
so part of: TOCE_RS00705
location: 136099..136539
location: region:136099-136539:1
so has part: feature:136099-136539:1:exon

WP_013274980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136099-136539:1:exon

TOCE_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: secY
locus tag: TOCE_RS00710
old locus tag: Toce_0138
so part of: sequence
location: 136539..137795
location: region:136539-137795:1
so has part: feature:136539-137795:1:exon
subclass of: SO_0000010

position:137795:1
position: 137795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136539-137795:1:exon

TOCE_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: secY
locus tag: TOCE_RS00710
old locus tag: Toce_0138
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777341.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecY
translation: MLEALKNAWKIPDLRRRLQFTLLMLVVFRIGAFVPVPGMNPEAVRQLIERGALLGFFDIIAGGAFKQFSVFAMSITPYINASIIVQLLTIVIPRWEELAKEGVEGRKVLARYTRYGTVILGLIQATGLAVGFRSALTNPGFFGSLLVVLSLTAGTAFLMWVGEQITDKGIGNGISLLIFAGIVSRLPSGVYQMYDYIRVGTANVLMVLLFAVFALVVIVGVIAVQQAERRIPVQYARRVVGRRVYGGQTTHIPMKLNAAGVIPVIFAMSILLFPSTIAGFFPNSKVAVSIANFIEPGGWLYASLYALLIIFFTYFYTAVTFNPVDVADNMKKYGGFIPGIRPGRSTAEYLNKIMTRITLIGAIFLAAIAVLPYLITGVTSLNIYFGGTALLIVIGVALETMKLIEAQMLMRHYQGFLK
SIO_010081: TOCE_RS00710
subclass of: SO_0000673
so part of: TOCE_RS00710
location: 136539..137795
location: region:136539-137795:1
so has part: feature:136539-137795:1:exon

WP_013274981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136539-137795:1:exon

TOCE_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00715
old locus tag: Toce_0139
so part of: sequence
location: 137808..138458
location: region:137808-138458:1
so has part: feature:137808-138458:1:exon
subclass of: SO_0000010

position:137808:1
position: 137808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138458:1
position: 138458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137808-138458:1:exon

TOCE_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00715
old locus tag: Toce_0139
EC number: 2.7.4.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777342.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO process: GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylate kinase
translation: MRIVLMGPPGAGKGTQAKKLAEAFDVPHISTGDMLRSAVQEGTPLGKKAREYMDKGLLVPDEVITGIVRERLRDKSCEKGFILDGFPRTIPQAESLEEALGEMGIRLDAVVNIVVPREELIERFTGRRVCEVCGFTYHVKYNPPQKEGICDKCGGKLIMRADDDVKTVENRINVYEQQTRPLIEYYDRKNLLVNIDGNRPIDVVFEDIKSRLRGEG
SIO_010081: TOCE_RS00715
subclass of: SO_0000673
so part of: TOCE_RS00715
location: 137808..138458
location: region:137808-138458:1
so has part: feature:137808-138458:1:exon

WP_013274982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137808-138458:1:exon

TOCE_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: map
locus tag: TOCE_RS00720
old locus tag: Toce_0140
so part of: sequence
location: 138458..139204
location: region:138458-139204:1
so has part: feature:138458-139204:1:exon
subclass of: SO_0000010

position:139204:1
position: 139204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138458-139204:1:exon

TOCE_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: map
locus tag: TOCE_RS00720
old locus tag: Toce_0140
EC number: 3.4.11.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777343.1
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I methionyl aminopeptidase
translation: MVIIKSKREIEIMRRAGRVVALVLEELKRHIKPGVTTGELDRIAEEVILKNGAVPAFKGYRGFPATICTSINEEVVHGIPGLRTLKDGDIISVDVGAIVEGYCSDAARTYPVGNVSEKALELIEVTRQSFYEGLTFAKAGYRLSDISHAIQTYVESRNFSVVREWGGHGIGRQMHEDPHVPNYGPPNKGPRLRPGMTLAIEPMVNAGGYEVYILEDNWTVVTKDGSLSAHYENTIAITDGEPEILTRI
SIO_010081: TOCE_RS00720
subclass of: SO_0000673
so part of: TOCE_RS00720
location: 138458..139204
location: region:138458-139204:1
so has part: feature:138458-139204:1:exon

WP_013274983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138458-139204:1:exon

TOCE_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00725
old locus tag: Toce_0141
so part of: sequence
location: 139217..139504
location: region:139217-139504:1
so has part: feature:139217-139504:1:exon
subclass of: SO_0000010

position:139217:1
position: 139217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139504:1
position: 139504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139217-139504:1:exon

TOCE_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00725
old locus tag: Toce_0141
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777344.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KOW domain-containing RNA-binding protein
translation: MKEVEPGQVVMSCAGRDKGRFMLVIRVIDSQYVYVADGKLRRIEKPKKKKLKHLKILNKKAGFIHEKLASGRKVYNEEIRRALEELVEKPDDNRV
SIO_010081: TOCE_RS00725
subclass of: SO_0000673
so part of: TOCE_RS00725
location: 139217..139504
location: region:139217-139504:1
so has part: feature:139217-139504:1:exon

WP_013274984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139217-139504:1:exon

TOCE_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: infA
locus tag: TOCE_RS00730
old locus tag: Toce_0142
so part of: sequence
location: 139524..139742
location: region:139524-139742:1
so has part: feature:139524-139742:1:exon
subclass of: SO_0000010

position:139524:1
position: 139524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139742:1
position: 139742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139524-139742:1:exon

TOCE_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: infA
locus tag: TOCE_RS00730
old locus tag: Toce_0142
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012039277.1
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-1
translation: MSKSDVIEVEGTVVEPLPNGMFRVELKNGHKVLAHVSGKIRMNYIRILPGDKVTVELSPYDLTRGRIVYRYK
SIO_010081: TOCE_RS00730
subclass of: SO_0000673
so part of: TOCE_RS00730
location: 139524..139742
location: region:139524-139742:1
so has part: feature:139524-139742:1:exon

WP_013274985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139524-139742:1:exon

TOCE_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rpmJ
locus tag: TOCE_RS00735
old locus tag: Toce_0143
so part of: sequence
location: 139764..139877
location: region:139764-139877:1
so has part: feature:139764-139877:1:exon
subclass of: SO_0000010

position:139764:1
position: 139764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139877:1
position: 139877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139764-139877:1:exon

TOCE_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rpmJ
locus tag: TOCE_RS00735
old locus tag: Toce_0143
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L36
translation: MKVRPSVKKICEKCKIIKRKGRVMVICENPKHKQRQG
SIO_010081: TOCE_RS00735
subclass of: SO_0000673
so part of: TOCE_RS00735
location: 139764..139877
location: region:139764-139877:1
so has part: feature:139764-139877:1:exon

WP_006307538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139764-139877:1:exon

TOCE_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rpsM
locus tag: TOCE_RS00740
old locus tag: Toce_0144
so part of: sequence
location: 139893..140264
location: region:139893-140264:1
so has part: feature:139893-140264:1:exon
subclass of: SO_0000010

position:139893:1
position: 139893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140264:1
position: 140264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139893-140264:1:exon

TOCE_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rpsM
locus tag: TOCE_RS00740
old locus tag: Toce_0144
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009125149.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S13
translation: MARIAGVDLPKDKRVEIALTYIYGIGRSLSNKILKEAGVNPDTRVKDLTEREISNLRDIIEKNYKVEGDLRREVALNIKRLIEIGCYRGIRHRRGLPVRGQRTRTNARTRKGPRKTVGARRSK
SIO_010081: TOCE_RS00740
subclass of: SO_0000673
so part of: TOCE_RS00740
location: 139893..140264
location: region:139893-140264:1
so has part: feature:139893-140264:1:exon

WP_013274986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139893-140264:1:exon

TOCE_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rpsK
locus tag: TOCE_RS00745
old locus tag: Toce_0145
so part of: sequence
location: 140285..140668
location: region:140285-140668:1
so has part: feature:140285-140668:1:exon
subclass of: SO_0000010

position:140285:1
position: 140285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140668:1
position: 140668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140285-140668:1:exon

TOCE_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rpsK
locus tag: TOCE_RS00745
old locus tag: Toce_0145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003130556.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S11
translation: MALTSRKRREKRRVEKGKAHIHSTFNNTIVTITDEAGNPITWASAGTVGFKGSRKGTPFAAQMAAESAARKAMDYGLRTVEVFVKGPGPGREAAIRSLQAAGLEISVIKDVTPIPHNGCRPPKRRRV
SIO_010081: TOCE_RS00745
subclass of: SO_0000673
so part of: TOCE_RS00745
location: 140285..140668
location: region:140285-140668:1
so has part: feature:140285-140668:1:exon

WP_013274987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140285-140668:1:exon

TOCE_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rpsD
locus tag: TOCE_RS00750
old locus tag: Toce_0146
so part of: sequence
location: 140698..141324
location: region:140698-141324:1
so has part: feature:140698-141324:1:exon
subclass of: SO_0000010

position:140698:1
position: 140698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141324:1
position: 141324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140698-141324:1:exon

TOCE_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rpsD
locus tag: TOCE_RS00750
old locus tag: Toce_0146
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1
GO component: GO:0015935 - small ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S4
translation: MARYTGPVCRLCRREGMKLYLKGERCYTPKCAIDRRGYAPGQHGQMKRKLSEYGLQLREKQKAKRIYGVLERQFKIYFEEAIRRKGVTGENLLRLLECRLDNVVYRLGFAKSRAQARQIVRHGHIEVNGRKVTIPSYQVREKDVIAVREKSRSLDFFKEMAEAGKGRIVPEWLSVNYDTLTGEVVRMPNREDIDVPIQEHLIVELYSK
SIO_010081: TOCE_RS00750
subclass of: SO_0000673
so part of: TOCE_RS00750
location: 140698..141324
location: region:140698-141324:1
so has part: feature:140698-141324:1:exon

WP_013274988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140698-141324:1:exon

TOCE_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00755
old locus tag: Toce_0147
so part of: sequence
location: 141368..142318
location: region:141368-142318:1
so has part: feature:141368-142318:1:exon
subclass of: SO_0000010

position:141368:1
position: 141368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142318:1
position: 142318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141368-142318:1:exon

TOCE_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00755
old locus tag: Toce_0147
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016293479.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit alpha
translation: MTEIEKPRIELVEISEDNTYGKIVIEPLERGYGTTLGNSLRRVLLSSLPGAAITSVKIDGVQHEFSTIPGVLEDTVEIIMNIKGLAIKMHSDEPKLLRIEAQGEGEVTAKDIICDADVEIINKDHHIATLDKDGRLFAELTLEKGKGYVTAEKNKKPGQPIGIIPIDSIFTPVIKANYTVEHTRVGQVTDYDKLTLEVWTNGTIKPDEAVSAAAKILIDYFNLFTGLTTAVKKVEAPVEKEKDERERILEMPIEELDLSVRSYNCLKRAGINTIGELIQKTPEEMMKVRNLGKKSLEEVEEKLAALNLSLKKSEDA
SIO_010081: TOCE_RS00755
subclass of: SO_0000673
so part of: TOCE_RS00755
location: 141368..142318
location: region:141368-142318:1
so has part: feature:141368-142318:1:exon

WP_013274989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141368-142318:1:exon

TOCE_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rplQ
locus tag: TOCE_RS00760
old locus tag: Toce_0148
so part of: sequence
location: 142334..142666
location: region:142334-142666:1
so has part: feature:142334-142666:1:exon
subclass of: SO_0000010

position:142334:1
position: 142334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142666:1
position: 142666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142334-142666:1:exon

TOCE_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rplQ
locus tag: TOCE_RS00760
old locus tag: Toce_0148
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777351.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L17
translation: MRKLGRDSGHRKMMLRNMVTSLFKHGRIITTETRAKEVRSIAEKIITLGKKNDLAARRMVLAEVLDETTVKNIFEKIAPKYNDRNGGYTRIIKLGPRRGDSSPMVVLELV
SIO_010081: TOCE_RS00760
subclass of: SO_0000673
so part of: TOCE_RS00760
location: 142334..142666
location: region:142334-142666:1
so has part: feature:142334-142666:1:exon

WP_013274990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142334-142666:1:exon

TOCE_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00765
old locus tag: Toce_0149
so part of: sequence
location: 142698..143528
location: region:142698-143528:1
so has part: feature:142698-143528:1:exon
subclass of: SO_0000010

position:142698:1
position: 142698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143528:1
position: 143528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142698-143528:1:exon

TOCE_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00765
old locus tag: Toce_0149
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777352.1
GO component: GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-coupling factor transporter ATPase
translation: MAAEILAESVYYQYSQAKDLALKDVNLRIQKGEFVAIIGPNGSGKSTLAKLFNGLFLPTKGSVRVDGLDTRDRDNIWKIRQKAGMVFQNPDNQIVATLVEEDVAFGPENLGLPPEEIKKRVYEALKIVELVDFAQKAPHLLSGGQKQRVAIAGVLAMKPDYIILDEPTAMLDPVGRREVINTVKRLNREEGKTIVLITHFMEEAVQADRVIAMNRGQVVMEGTPREIFSRVEELKAIGLDVPQVTELAHRLKGRGLEVRGDILTIDEMVECLCPLL
SIO_010081: TOCE_RS00765
subclass of: SO_0000673
so part of: TOCE_RS00765
location: 142698..143528
location: region:142698-143528:1
so has part: feature:142698-143528:1:exon

WP_013274991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142698-143528:1:exon

TOCE_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00770
old locus tag: Toce_0150
so part of: sequence
location: 143513..144376
location: region:143513-144376:1
so has part: feature:143513-144376:1:exon
subclass of: SO_0000010

position:143513:1
position: 143513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144376:1
position: 144376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143513-144376:1:exon

TOCE_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00770
old locus tag: Toce_0150
EC number: 3.6.3.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777353.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-coupling factor transporter ATPase
translation: MPVVVKNLTHIYMPGTPFESVALQDVNWTVQDGEFWGLIGHTGSGKSTLIQHLNGLLKPTSGEVIIDGVNINERGVNLREIRQKVGLVFQYPEHQLFEETVEKDVAFGPRNIGLPEEEIDRRVREAIELVGLNFSEIKDRSPFELSGGQMRRVAIAGVLAMKPKVLILDEPTVGLDPRGKDEILREIVQLRERQNITVILVSHSMEDIAKLVDKIAVMHRGRMVESGTPREIFKNYEGLSSIGLDIPQVTHLMLKLKNCGKDVSTEVLTVEEAEAEILEAARRKGRA
SIO_010081: TOCE_RS00770
subclass of: SO_0000673
so part of: TOCE_RS00770
location: 143513..144376
location: region:143513-144376:1
so has part: feature:143513-144376:1:exon

WP_013274992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143513-144376:1:exon

TOCE_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00775
old locus tag: Toce_0151
so part of: sequence
location: 144369..145166
location: region:144369-145166:1
so has part: feature:144369-145166:1:exon
subclass of: SO_0000010

position:144369:1
position: 144369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145166:1
position: 145166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144369-145166:1:exon

TOCE_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00775
old locus tag: Toce_0151
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013274993.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-coupling factor transporter transmembrane component T
translation: MREITIGQYIPGNSVIHRLDPRTKILITTAFMVLLFVIDDFTGYAFPAVFIIAVSILSGISLKYMMRGLRPLVIIIVLTFVLNLFMIKGRVIYEIGPLDITYEGLYQGTFMVLRLIMLIVGTSLLTLTTSPIALTDGIESLLKPFRRVGVPAHELAMMMTIALRFIPTLMEETDKIMKAQMARGADFASGNVVQRARSLVPLLVPLFINAFRRADDLAMAMESRCYRGGENRTRMKQLRMTSADLAAFIATGLLAVGSIMSRFIW
SIO_010081: TOCE_RS00775
subclass of: SO_0000673
so part of: TOCE_RS00775
location: 144369..145166
location: region:144369-145166:1
so has part: feature:144369-145166:1:exon

WP_013274993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144369-145166:1:exon

TOCE_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: truA
locus tag: TOCE_RS00780
old locus tag: Toce_0152
so part of: sequence
location: 145167..145907
location: region:145167-145907:1
so has part: feature:145167-145907:1:exon
subclass of: SO_0000010

position:145167:1
position: 145167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145907:1
position: 145907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145167-145907:1:exon

TOCE_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: truA
locus tag: TOCE_RS00780
old locus tag: Toce_0152
EC number: 5.4.99.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777355.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA pseudouridine(38-40) synthase TruA
translation: MTALNVKILLEYDGTNYHGWQKQNNALSVQEVLEKAIYALTGERVSIIGAGRTDAGVHARGQVANFRTNTRIPVERLPYAINSKLPEDIAVKGAEAVPDDFHARYSAKAKVYTYSIYNAPFPSPLLRRYSYFFPLPLDVEAMRRAAKAFIGVHDFAAFRASGSSVKTSVRNITRLDVKKCGKLLTIEVEADGFLYNMVRIIAGTLLEVGTGKKDPEEIPSIIESRDRERAGVTLPAHGLCLEKVIY
SIO_010081: TOCE_RS00780
subclass of: SO_0000673
so part of: TOCE_RS00780
location: 145167..145907
location: region:145167-145907:1
so has part: feature:145167-145907:1:exon

WP_245523133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145167-145907:1:exon

TOCE_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rplM
locus tag: TOCE_RS00785
old locus tag: Toce_0153
so part of: sequence
location: 145967..146401
location: region:145967-146401:1
so has part: feature:145967-146401:1:exon
subclass of: SO_0000010

position:145967:1
position: 145967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146401:1
position: 146401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145967-146401:1:exon

TOCE_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rplM
locus tag: TOCE_RS00785
old locus tag: Toce_0153
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009305940.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L13
translation: MSTFMAKKEEIKREWYVIDATDKPLGRLAAQVAKILKGKHKPIYTPHVDTGDHVIIVNADKVVLTGKKLDKKIYYRHSLYPGGLKAETYRHFLQRAPEKAIYKAVWGMLPHNSLGRRMIKKLKIYRGPEHPHQAQQPKELPYEG
SIO_010081: TOCE_RS00785
subclass of: SO_0000673
so part of: TOCE_RS00785
location: 145967..146401
location: region:145967-146401:1
so has part: feature:145967-146401:1:exon

WP_013274995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145967-146401:1:exon

TOCE_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rpsI
locus tag: TOCE_RS00790
old locus tag: Toce_0154
so part of: sequence
location: 146417..146806
location: region:146417-146806:1
so has part: feature:146417-146806:1:exon
subclass of: SO_0000010

position:146417:1
position: 146417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146806:1
position: 146806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146417-146806:1:exon

TOCE_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rpsI
locus tag: TOCE_RS00790
old locus tag: Toce_0154
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002942223.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S9
translation: MKEAVLATGRRKTSVARVWLTPGTGRILINKRPFEEYFPLETLRNDVTRPLVVTNTLGKFDIIANVRGGGVTGQAGAVRHGIARALLQIDETFKPMLRKEGLLTRDPRMVERKKYGLKKARRAPQFSKR
SIO_010081: TOCE_RS00790
subclass of: SO_0000673
so part of: TOCE_RS00790
location: 146417..146806
location: region:146417-146806:1
so has part: feature:146417-146806:1:exon

WP_013274996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146417-146806:1:exon

TOCE_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: trxB
locus tag: TOCE_RS00795
old locus tag: Toce_0155
so part of: sequence
location: 146916..147836
location: region:146916-147836:1
so has part: feature:146916-147836:1:exon
subclass of: SO_0000010

position:146916:1
position: 146916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147836:1
position: 147836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146916-147836:1:exon

TOCE_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: trxB
locus tag: TOCE_RS00795
old locus tag: Toce_0155
EC number: 1.8.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777363.1
GO function: GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin-disulfide reductase
translation: MYDLAIIGAGPAGLSAAIYGARARLSTVMIEKMYPGGQAAITDIIENYPGFPEGIGGAELTEAMKKQAERFGAQFLNGNVEKIEKVGEKFLIRLKTETLEAKTVILAMGAEARKLGVKGEKEFTGRGVSYCATCDGAFYTDRPVMVVGGGDTAIGEAIYLTHFATSVTVVHRRNELRATKILQERAFKNEKIKFIWDSVVDEIKGGDAVEEVVVRNVKTGEKTSVPVDGIFVAIGWDPNTAIVKDLVQLNERGYIVTDENMATNVPGLFAAGDIREKSLRQVVTAVADGAIAAVSAEKYLEEHQMR
SIO_010081: TOCE_RS00795
subclass of: SO_0000673
so part of: TOCE_RS00795
location: 146916..147836
location: region:146916-147836:1
so has part: feature:146916-147836:1:exon

WP_013274997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146916-147836:1:exon

TOCE_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00800
old locus tag: Toce_0156
so part of: sequence
location: 148072..149283
location: region:148072-149283:1
so has part: feature:148072-149283:1:exon
subclass of: SO_0000010

position:148072:1
position: 148072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149283:1
position: 149283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148072-149283:1:exon

TOCE_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00800
old locus tag: Toce_0156
EC number: 6.3.4.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012095764.1
GO function: GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006526 - arginine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: argininosuccinate synthase
translation: MKKVVLAYSGGLDTSVAIKWLKENYNCDVVALCADLGEGKDLEFIKNKAERVGAIKCYVVDAKEEFIKNYAFFALKANALYEGVYPLSAALSRPLISKLLVDVARREGAFAVAHGCTGKGNDQVRFDVSVAALAPDLKVIAPVREWPMSREEEIEYAVNNGIPVPVGRQNPFSIDQNLWGRSIECGVLEDPWVEPPEEVFQWTVSPEKTPDEPTYVEITFEKGVPVALNGKEMAPVELVQELNKIAGNNGFGRIDHVENRLVGIKSREVYECPASLLLINAHRNLESLTLPREVLHFKYGVERKYAELIYNGLWYSPLKEALDAFIDETQKVVSGTVKVKLFKGSAMVVGRKSSRSLYDIKLATYSEEDLFEHRAAMGFITLWGLSTKVYARVNKKNEPQTEG
SIO_010081: TOCE_RS00800
subclass of: SO_0000673
so part of: TOCE_RS00800
location: 148072..149283
location: region:148072-149283:1
so has part: feature:148072-149283:1:exon

WP_013274998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148072-149283:1:exon

TOCE_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: argH
locus tag: TOCE_RS00805
old locus tag: Toce_0157
so part of: sequence
location: 149288..150604
location: region:149288-150604:1
so has part: feature:149288-150604:1:exon
subclass of: SO_0000010

position:149288:1
position: 149288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150604:1
position: 150604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149288-150604:1:exon

TOCE_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: argH
locus tag: TOCE_RS00805
old locus tag: Toce_0157
EC number: 4.3.2.1
inference: COORDINATES: protein motif:HMM:TIGR00838.1
GO function: GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
GO process: GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: argininosuccinate lyase
translation: MSKKLWGGRFEKETDDLVEKFTASIDFDKRLYEQDIKGSMAHARMLARAGIIPKEEAAEIIKGLLEIKLEIERGEFPFTCELEDIHMHVESRLFEKIGPVAGKLHTARSRNDQVALDLHLYVKEKIAEVVGKIDELMKVLRKLAAENRDAVMPGYTHLQRAQPVTLSRHLKAYYYMLRRDKERFSKALKGADIMPLGACALAGTTLPIDREYTGELLGFSRIYENTIDAVSDRDFVIEFISCSAILMVHLSRMAEDLILWSTSEFDFIELDDAFATGSSIMPQKKNPDVLELIRGKAGRVFGNLMSVLTVMKGLPLSYNRDMQEDKEPLFDTADTVIGCLKVLPKLLSTMKIKKENMKKAVEESFSDATYYAEYLVKKGMPFRAAHEVVGKMVSYCIKKNKKLSDLSLREFKNFSKLFDEDVLDLSRYPEKVKNKKVL
SIO_010081: TOCE_RS00805
subclass of: SO_0000673
so part of: TOCE_RS00805
location: 149288..150604
location: region:149288-150604:1
so has part: feature:149288-150604:1:exon

WP_013274999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149288-150604:1:exon

TOCE_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cobT
locus tag: TOCE_RS00810
old locus tag: Toce_0158
so part of: sequence
location: complement(150787..151842)
location: region:150787-151842:-1
so has part: feature:150787-151842:-1:exon
subclass of: SO_0000010

position:150787:-1
position: 150787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151842:-1
position: 151842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150787-151842:-1:exon

TOCE_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cobT
locus tag: TOCE_RS00810
old locus tag: Toce_0158
EC number: 2.4.2.21
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778153.1
GO function: GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
translation: MKLLEEALKNIGDLDEISMKKAKERLDNLTKPRGSLGILEDLAVKMAGIKRELYPKIKNKVITIMAGDHGVVEEGVSAFPQEVTPQMILNFLSGGAGINVLARHAGAKIVCVDVGTAADVFHPDLIIKKVRRGTDNISRGPAMTREEAIKAIEVGIETAWNEIDKGADILGTGDMGIGNTTPSSAILAVYSDEPLEKLVGRGTGINDERLKLKIKAINRALEINQPDPNDPIGVLSKVGGLEIGAIAGCILGAASRRIPVVIDGFISTAGAIIAAKIEPLCTNYMIASHSSEEPGHKTMLKLLGLEPMLSMRMRLGEGTGAALAFNLVEAALKIISEMATFDEAGVSGQLE
SIO_010081: TOCE_RS00810
subclass of: SO_0000673
so part of: TOCE_RS00810
location: complement(150787..151842)
location: region:150787-151842:-1
so has part: feature:150787-151842:-1:exon

WP_013275000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150787-151842:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 555079
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00174
inference: COORDINATES: profile:INFERNAL:1.1.4
note: cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: adenosylcobalamin
so part of: sequence
location: complement(151926..152103)
location: region:151926-152103:-1
so has part: feature:151926-152103:-1:region

position:151926:-1
position: 151926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152103:-1
position: 152103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151926-152103:-1:region

TOCE_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: brnQ
locus tag: TOCE_RS00820
old locus tag: Toce_0160
so part of: sequence
location: complement(152471..153772)
location: region:152471-153772:-1
so has part: feature:152471-153772:-1:exon
subclass of: SO_0000010

position:152471:-1
position: 152471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153772:-1
position: 153772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152471-153772:-1:exon

TOCE_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: brnQ
locus tag: TOCE_RS00820
old locus tag: Toce_0160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013275003.1
GO function: GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
GO process: GO:0015803 - branched-chain amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid transport system II carrier protein
translation: MNKKLQDVIVIGFALFAMFFGAGNLIFPPSIGFQLSSKWFLGLLGFMLTGIGLPLLGIITVALNEGSFDNFAGKAGKTFANALNFAIVLCIGPLLAIPRTGATTYEMGIAPIMPDFNILLACLIYFAINIYFTINRSKVIDYIGKILTPTLLIMLAIIIIKGIIDPIGGFTASKIPNAFGRSFMEGYQTMDALGSIILAGIIVNAVREKGYDKPGDQIKLTILSGLIAALGLLFVYGGLMYLGATASTLFDGEIGKTALLISIVEKEFGSFGKVALGLAVSLACMTTSVGLTATAAEYFSRLTKNRISYKTMVVIISLFSAFMGAFGVEKIIKFSVPILVSVYPVVIVLILMNAFGSFIKNNRCYVYATIFTLLISVVDGLSAAGLNVNKIYEVMYYLPFAKEGFAWVYTAIFGIMLGMMHSAFNKTLEKENN
SIO_010081: TOCE_RS00820
subclass of: SO_0000673
so part of: TOCE_RS00820
location: complement(152471..153772)
location: region:152471-153772:-1
so has part: feature:152471-153772:-1:exon

WP_013275002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152471-153772:-1:exon

TOCE_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: brnQ
locus tag: TOCE_RS00825
old locus tag: Toce_0161
so part of: sequence
location: complement(153980..155281)
location: region:153980-155281:-1
so has part: feature:153980-155281:-1:exon
subclass of: SO_0000010

position:153980:-1
position: 153980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155281:-1
position: 155281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153980-155281:-1:exon

TOCE_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: brnQ
locus tag: TOCE_RS00825
old locus tag: Toce_0161
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013275003.1
GO function: GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
GO process: GO:0015803 - branched-chain amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid transport system II carrier protein
translation: MNKKFSDLMVIGFALFAMFFGAGNLIFPPSIGFQLSSKWFLGFLGFMLTGIGLPLLGIIAMAQNEGSFDNFAGKAGKTFANALNFVIVLCIGPLLAIPRTGATTYEMGIAPIMPDFNILLACLIYFAINIYFTINQSRVIDNVGKILTPTLLIMLAIIIIKGIIDPIGGFTASKIPNPFGKSFLEGYQTMDALASTIFAGIIINAIKERGYNDVGDKIKLTILSGLIAALGLLFVYGGLMYLGATASTLFDGEIGKTVLLISIIEKEFGNFGKVALGLAVSLACMTTSVGLTATAAEYFSRLTKNRISYKTMVVIISLFSAFMGAFGVEKIIKFSVPILVSVYPVVIVLILMNAFGPFIKNNRCYVYATIFTLLISVVDGLSAAGLNVNKIYEVMYYLPFAKEGFAWVYTAIFGIMLGMMHSAFNKTLEKENN
SIO_010081: TOCE_RS00825
subclass of: SO_0000673
so part of: TOCE_RS00825
location: complement(153980..155281)
location: region:153980-155281:-1
so has part: feature:153980-155281:-1:exon

WP_013275003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153980-155281:-1:exon

TOCE_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00830
old locus tag: Toce_0162
so part of: sequence
location: complement(155470..156360)
location: region:155470-156360:-1
so has part: feature:155470-156360:-1:exon
subclass of: SO_0000010

position:155470:-1
position: 155470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156360:-1
position: 156360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155470-156360:-1:exon

TOCE_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00830
old locus tag: Toce_0162
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778707.1
GO function: GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation diffusion facilitator family transporter
translation: MNERVENFKKIKKVLWAVLGLNLSVAFLKILVGYSISSSSMMADGFHSLSDASTNIIGLIGAALASKPADATHPYGHGKFETFTATGIALMLFLVSFNIIKSGIERLLNPRIPEVNSFSLIIMFITLAVNIGVILYEDMEGKKLHSHILISDAAHTRSDLYVSLSVIAGLIAVKLGYPIVDPLISFVIALLILKAGIEIIKDTSRVLCDAAVVDPEKIASLVRNIRGVVDCHGVRTRGREDDFSMDLHILVNPSMTVEESHRLHHSIEEEIRRNFKGAHHILIHIEPYPDSSNQNT
SIO_010081: TOCE_RS00830
subclass of: SO_0000673
so part of: TOCE_RS00830
location: complement(155470..156360)
location: region:155470-156360:-1
so has part: feature:155470-156360:-1:exon

WP_013275004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155470-156360:-1:exon

TOCE_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: greA
locus tag: TOCE_RS00835
old locus tag: Toce_0163
so part of: sequence
location: 156753..157229
location: region:156753-157229:1
so has part: feature:156753-157229:1:exon
subclass of: SO_0000010

position:156753:1
position: 156753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157229:1
position: 157229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156753-157229:1:exon

TOCE_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: greA
locus tag: TOCE_RS00835
old locus tag: Toce_0163
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777366.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO process: GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription elongation factor GreA
translation: MPKKEVVLTQEGLRKLEKELEYLKSVKRKEVADRIKQAISFGDLSENSEYDEAKNEQAFVEGKIAMLEEKLRNAKVIDDADISTETVTLGSKVLIRDLDTEEAIEYTIVSSAEANPIDFKISNESPVGKALMGAKKGDVIEISVPAGQVRYRVEEIKK
SIO_010081: TOCE_RS00835
subclass of: SO_0000673
so part of: TOCE_RS00835
location: 156753..157229
location: region:156753-157229:1
so has part: feature:156753-157229:1:exon

WP_013275005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156753-157229:1:exon

TOCE_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: lysS
locus tag: TOCE_RS00840
old locus tag: Toce_0164
so part of: sequence
location: 157250..158722
location: region:157250-158722:1
so has part: feature:157250-158722:1:exon
subclass of: SO_0000010

position:157250:1
position: 157250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158722:1
position: 158722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157250-158722:1:exon

TOCE_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: lysS
locus tag: TOCE_RS00840
old locus tag: Toce_0164
EC number: 6.1.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777367.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysine--tRNA ligase
translation: MGNLELEANEIIRARLQKLEELRSMGIAPYGQKYVRTHNCLEIKENFEKLEGSETSIAGRIMAIRGHGKAAFFDIQDEKGRLQIYIKKDHVGDEVYEIFKKLDIGDIIGVEGKIFKTQKGEISVMADRITVLAKSLRPLPEKWHGLKDVDTRYRQRYLDLIVNPDVRRTFVTRSKIIRAIRNYLDSRGFIEVETPVLTPLAGGAAARPFITHHNALDIDLYLRIATELYLKRLIVGGFEKVYEIGKDFRNEGISIKHNPEFTMIELYQAYADYQDMMELTEDMISHVAKEVLGTTKVVYQGEEIDLTPPWTRMTMVEAVKKYAGVDFNELKTDEEARAVARKLGLEVGDNDTRGKVLNTIFEEKVEEHLVQPTFILDYPIEISPLAKRKEDNPDFTYRFELFITRRETANAFSELNDPIDQRERFLQQLKEREAGDEEAHAFDEDFINALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVILFPTMRPKS
SIO_010081: TOCE_RS00840
subclass of: SO_0000673
so part of: TOCE_RS00840
location: 157250..158722
location: region:157250-158722:1
so has part: feature:157250-158722:1:exon

WP_013275006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157250-158722:1:exon

TOCE_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00845
old locus tag: Toce_R0001
so part of: sequence
location: 159036..160555
location: region:159036-160555:1
so has part: feature:159036-160555:1:exon
subclass of: SO_0000573

position:159036:1
position: 159036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160555:1
position: 160555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159036-160555:1:exon

TOCE_RS00845
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 555079
locus tag: TOCE_RS00845
old locus tag: Toce_R0001
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TOCE_RS00845
subclass of: SO_0000673
so part of: TOCE_RS00845
location: 159036..160555
location: region:159036-160555:1
so has part: feature:159036-160555:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159036-160555:1:exon

TOCE_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00850
old locus tag: Toce_R0002
so part of: sequence
location: 160663..163627
location: region:160663-163627:1
so has part: feature:160663-163627:1:exon
subclass of: SO_0000573

position:160663:1
position: 160663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163627:1
position: 163627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160663-163627:1:exon

TOCE_RS00850
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 555079
locus tag: TOCE_RS00850
old locus tag: Toce_R0002
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TOCE_RS00850
subclass of: SO_0000673
so part of: TOCE_RS00850
location: 160663..163627
location: region:160663-163627:1
so has part: feature:160663-163627:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160663-163627:1:exon

TOCE_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rrf
locus tag: TOCE_RS00855
old locus tag: Toce_R0003
so part of: sequence
location: 163724..163838
location: region:163724-163838:1
so has part: feature:163724-163838:1:exon
subclass of: SO_0000573

position:163724:1
position: 163724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163838:1
position: 163838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163724-163838:1:exon

TOCE_RS00855
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 555079
gene: rrf
locus tag: TOCE_RS00855
old locus tag: Toce_R0003
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TOCE_RS00855
subclass of: SO_0000673
so part of: TOCE_RS00855
location: 163724..163838
location: region:163724-163838:1
so has part: feature:163724-163838:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:163724-163838:1:exon

TOCE_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00860
old locus tag: Toce_0165
so part of: sequence
location: 164215..165573
location: region:164215-165573:1
so has part: feature:164215-165573:1:exon
subclass of: SO_0000010

position:164215:1
position: 164215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165573:1
position: 165573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164215-165573:1:exon

TOCE_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00860
old locus tag: Toce_0165
inference: COORDINATES: protein motif:HMM:NF014237.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stalk domain-containing protein
translation: MMRLKFVIWGLIFLLAWPVPAKAEPAFKQKPQDIRVLIEVEGYKLAKYEPVEGTYLGAYVYQDTLIKGDMKEFNRLTGKKHASFFLYVGYGQKFPQWWIDQLKEVGAAAHIAWEPNKGLDQVKDDEYLRGFARKLKEAGIPVFLRFASEMNGDWTAYSGDPKKYIEKWRLVHDVMEQEAPNVMMVWTVFTFPQSTIIKYYPGDEYVDWVGVNIYNVVYHNNNIKHKASHEDPLELLDYVYDTFSMRKPIQISEYGATHYTVTDGKYYEDFAIQKITRMYNGIKTRYPRVKSIFYFNVNNLANAPEGRRINNYAITDNKRILGTYSELIEDPHFLSDIGPNLEGRTDRELMHVRDGVHIVKGKIFVSSRVLKEYMKASVNWDSKKKQITIKKGERSAVLNVVSYANVLRGAKGAFTLKGTSYLPLREAADALGYRVMWDNSEKLIKVVLADRT
SIO_010081: TOCE_RS00860
subclass of: SO_0000673
so part of: TOCE_RS00860
location: 164215..165573
location: region:164215-165573:1
so has part: feature:164215-165573:1:exon

WP_013275007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164215-165573:1:exon

TOCE_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00865
old locus tag: Toce_0166
so part of: sequence
location: 165682..165939
location: region:165682-165939:1
so has part: feature:165682-165939:1:exon
subclass of: SO_0000010

position:165682:1
position: 165682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165939:1
position: 165939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165682-165939:1:exon

TOCE_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00865
old locus tag: Toce_0166
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLVDIHLKLQFSLKIDMHALGGFELDQPITGRDYIQILNRILKSDYGDYKELLEEGIINDFVGLYKPKHKRAIRSINYLTSNIPH
SIO_010081: TOCE_RS00865
subclass of: SO_0000673
so part of: TOCE_RS00865
location: 165682..165939
location: region:165682-165939:1
so has part: feature:165682-165939:1:exon

WP_013275008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165682-165939:1:exon

TOCE_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00870
old locus tag: Toce_R0004
so part of: sequence
location: 166198..167717
location: region:166198-167717:1
so has part: feature:166198-167717:1:exon
subclass of: SO_0000573

position:166198:1
position: 166198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167717:1
position: 167717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166198-167717:1:exon

TOCE_RS00870
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 555079
locus tag: TOCE_RS00870
old locus tag: Toce_R0004
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TOCE_RS00870
subclass of: SO_0000673
so part of: TOCE_RS00870
location: 166198..167717
location: region:166198-167717:1
so has part: feature:166198-167717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:166198-167717:1:exon

TOCE_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00875
old locus tag: Toce_R0005
so part of: sequence
location: 167825..170789
location: region:167825-170789:1
so has part: feature:167825-170789:1:exon
subclass of: SO_0000573

position:167825:1
position: 167825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170789:1
position: 170789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167825-170789:1:exon

TOCE_RS00875
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 555079
locus tag: TOCE_RS00875
old locus tag: Toce_R0005
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TOCE_RS00875
subclass of: SO_0000673
so part of: TOCE_RS00875
location: 167825..170789
location: region:167825-170789:1
so has part: feature:167825-170789:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:167825-170789:1:exon

TOCE_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rrf
locus tag: TOCE_RS00880
old locus tag: Toce_R0006
so part of: sequence
location: 170886..171000
location: region:170886-171000:1
so has part: feature:170886-171000:1:exon
subclass of: SO_0000573

position:170886:1
position: 170886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171000:1
position: 171000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170886-171000:1:exon

TOCE_RS00880
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 555079
gene: rrf
locus tag: TOCE_RS00880
old locus tag: Toce_R0006
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TOCE_RS00880
subclass of: SO_0000673
so part of: TOCE_RS00880
location: 170886..171000
location: region:170886-171000:1
so has part: feature:170886-171000:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170886-171000:1:exon

TOCE_RS12215
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12215
old locus tag: Toce_0167
so part of: sequence
location: 171150..171311
location: region:171150-171311:1
so has part: feature:171150-171311:1:exon
subclass of: SO_0000010

position:171150:1
position: 171150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171311:1
position: 171311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171150-171311:1:exon

TOCE_RS12215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12215
old locus tag: Toce_0167
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEARGENTEYLGAELQEENKKAKAGLPEMDFTVGSIPAHLIKFSIPLTWPPGT
SIO_010081: TOCE_RS12215
subclass of: SO_0000673
so part of: TOCE_RS12215
location: 171150..171311
location: region:171150-171311:1
so has part: feature:171150-171311:1:exon

WP_013275009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171150-171311:1:exon

TOCE_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00885
old locus tag: Toce_0168
so part of: sequence
location: 171344..171733
location: region:171344-171733:1
so has part: feature:171344-171733:1:exon
subclass of: SO_0000010

position:171344:1
position: 171344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171733:1
position: 171733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171344-171733:1:exon

TOCE_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00885
old locus tag: Toce_0168
inference: COORDINATES: protein motif:HMM:NF013703.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MATE family efflux transporter
translation: MEFKCERDMTIAVFTIPEKLLALFTSNPALVAVGTVILRILGVAYIPLGLLWVSNGILRGAGNTLVPMIISIFSLWGMRVPLAYYLANFTPLKSTGIWVAISSSMIISPALTLAYYYSRWWKKAMKNIA
SIO_010081: TOCE_RS00885
subclass of: SO_0000673
so part of: TOCE_RS00885
location: 171344..171733
location: region:171344-171733:1
so has part: feature:171344-171733:1:exon

WP_041423810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171344-171733:1:exon

TOCE_RS12220
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12220
old locus tag: Toce_0169
so part of: sequence
location: 171954..172544
location: region:171954-172544:1
so has part: feature:171954-172544:1:exon
subclass of: SO_0000010

position:171954:1
position: 171954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172544:1
position: 172544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171954-172544:1:exon

TOCE_RS12220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12220
old locus tag: Toce_0169
inference: COORDINATES: protein motif:HMM:TIGR00231.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FeoB small GTPase domain-containing protein
translation: MDCCSQKGNVLSRFFKRKQDNSFSHQNCNTRKKLVLVGTPNVGKSVIFNRLTGAYVTVSNYPGTTVEIFRGTGRIGGEIFEIIDTPGMYSLMPITEEERVTRTLLFNENFDIVVHVVDAKNIERMLSMTMQLKEAGLPVMLVVNMMDEAERLGRKIDLDRLSALLDIPVVGTSAALNRGMDQMRRKVAEYVKKRVA
SIO_010081: TOCE_RS12220
subclass of: SO_0000673
so part of: TOCE_RS12220
location: 171954..172544
location: region:171954-172544:1
so has part: feature:171954-172544:1:exon

WP_013275010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171954-172544:1:exon

TOCE_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00895
old locus tag: Toce_0170
so part of: sequence
location: 172522..173991
location: region:172522-173991:1
so has part: feature:172522-173991:1:exon
subclass of: SO_0000010

position:172522:1
position: 172522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173991:1
position: 173991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172522-173991:1:exon

TOCE_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00895
old locus tag: Toce_0170
inference: COORDINATES: protein motif:HMM:NF019292.2
GO function: GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0006826 - iron ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferrous iron transporter B
translation: MSKNELLEHNVHPFKYHDDIEKALEEIEKLLKSNYKVSKRSVALLLLQDDEEITELVRSRENSFPEIQEVINRTRKKFSEPLHFVITMQRQKKVDEIVSQVVKAGDRSRSSIGSWLDRITVQPVTGIPILLLVLYFGLYKFVGEFGAGTLVDFIEGNIFENYINPWVNSAVQAYIPNRAVQELLAMEYGIITLGIRYAVAIILPIVGTFFLMFSVIEDSGYLPRLALLVDRVFKSMGLNGRAVIPMTLGFGCDTMATLVSRTLETRRERVIATLLLALAIPCSAQLGVILGLLSGRPAALAIWATFVVLVFLLVGYLAAQVLPGERPVFYMEIPPLRLPRLGNIIEKTVSRMQWYFLEIVPIFIITSVLIWIGRMTGIFDALIRATEPLMQALGLPPETAQAFLFGFFRRDYGAAGLYDLQKSGILNGAQMLVASVTLTLFVPCIAQFTVMLKERGVKTTLAIVAFVFPFAFLAGYILNLILKLAGVVL
SIO_010081: TOCE_RS00895
subclass of: SO_0000673
so part of: TOCE_RS00895
location: 172522..173991
location: region:172522-173991:1
so has part: feature:172522-173991:1:exon

WP_013275011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172522-173991:1:exon

TOCE_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00900
old locus tag: Toce_0171
so part of: sequence
location: 173993..174178
location: region:173993-174178:1
so has part: feature:173993-174178:1:exon
subclass of: SO_0000010

position:173993:1
position: 173993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174178:1
position: 174178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173993-174178:1:exon

TOCE_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00900
old locus tag: Toce_0171
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKCGFCGYEFDEEERGARTCGGCPMSGRCGKVKCPRCGYEMVKPSGLFKWLKRRREKINGR
SIO_010081: TOCE_RS00900
subclass of: SO_0000673
so part of: TOCE_RS00900
location: 173993..174178
location: region:173993-174178:1
so has part: feature:173993-174178:1:exon

WP_013275012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173993-174178:1:exon

TOCE_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00905
old locus tag: Toce_0172
so part of: sequence
location: 174168..174398
location: region:174168-174398:1
so has part: feature:174168-174398:1:exon
subclass of: SO_0000010

position:174168:1
position: 174168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174398:1
position: 174398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174168-174398:1:exon

TOCE_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00905
old locus tag: Toce_0172
inference: COORDINATES: protein motif:HMM:NF015956.2
GO function: GO:0046914 - transition metal ion binding [Evidence IEA]
GO process: GO:0055072 - iron ion homeostasis [Evidence IEA]; GO:0006811 - monoatomic ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FeoA family protein
translation: MAGERNLTQLKIGEQAVIAKINAPNGGILKKLMALGVLPGARVSLVQKFPSYVIKVGNTQIAADETIAKSIIVIKN
SIO_010081: TOCE_RS00905
subclass of: SO_0000673
so part of: TOCE_RS00905
location: 174168..174398
location: region:174168-174398:1
so has part: feature:174168-174398:1:exon

WP_013275013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174168-174398:1:exon

TOCE_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00910
old locus tag: Toce_0173
so part of: sequence
location: complement(174417..175421)
location: region:174417-175421:-1
so has part: feature:174417-175421:-1:exon
subclass of: SO_0000010

position:174417:-1
position: 174417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175421:-1
position: 175421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174417-175421:-1:exon

TOCE_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00910
old locus tag: Toce_0173
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777371.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AIR synthase family protein
translation: MKTGKVPPDILKKAVYPFLGQKRSEVLVHSGFGEDCCIIDFGEYVAVVSTDPITGADTAGGYLAVFVACNDIAACGARPIGILVTLLLPEGSGEDTLLRIMENVHKACQKIGIEVLGGHSEVTPAVTKPVISATAIGMAKRDNFVTSAGASPGDDVIVTKFIGLEGTAVLALDFEEYLRGKLPGEVIKRAQSFVDDISVIQDGLTAAGAGATAMHDITEGGLLGALWELAEASGVGMEIYRERIPILPETEAVCRAFELDPLGLISSGSMLICSGDGQKVVDALREKSIPATVIGKVTDGGRFILDADKKIPIVPPERDELYRAIENVKNKKKN
SIO_010081: TOCE_RS00910
subclass of: SO_0000673
so part of: TOCE_RS00910
location: complement(174417..175421)
location: region:174417-175421:-1
so has part: feature:174417-175421:-1:exon

WP_013275014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174417-175421:-1:exon

TOCE_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00915
old locus tag: Toce_0174
so part of: sequence
location: complement(175433..175924)
location: region:175433-175924:-1
so has part: feature:175433-175924:-1:exon
subclass of: SO_0000010

position:175433:-1
position: 175433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175924:-1
position: 175924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175433-175924:-1:exon

TOCE_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00915
old locus tag: Toce_0174
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777372.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ECF transporter S component
translation: MSESIKKLAFMGLFMALLVIATYLLSFPVPNFNLYFNLGESIIYLVALIYGGIPAAVIGGVGSALADILKGYPVWAPITFFIKGIEGFIAGTFAQRSNPYTGVVLGAAFMMTGYAIAAWRLYGIGAVPIELAGDFVQVSVGAVIALFLHRRLKKLSFEDKDNF
SIO_010081: TOCE_RS00915
subclass of: SO_0000673
so part of: TOCE_RS00915
location: complement(175433..175924)
location: region:175433-175924:-1
so has part: feature:175433-175924:-1:exon

WP_013275015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175433-175924:-1:exon

misc_binding
type: Miscellaneous Binding Site
subclass of: SO_0000409
RO_0002162: 555079
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00230
inference: COORDINATES: profile:INFERNAL:1.1.4
note: T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: tRNA
so part of: sequence
location: 176048..176252
location: region:176048-176252:1
so has part: feature:176048-176252:1:region

position:176048:1
position: 176048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176252:1
position: 176252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176048-176252:1:region

TOCE_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: serS
locus tag: TOCE_RS00925
old locus tag: Toce_0176
so part of: sequence
location: 176305..177585
location: region:176305-177585:1
so has part: feature:176305-177585:1:exon
subclass of: SO_0000010

position:176305:1
position: 176305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177585:1
position: 177585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176305-177585:1:exon

TOCE_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: serS
locus tag: TOCE_RS00925
old locus tag: Toce_0176
EC number: 6.1.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003218092.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine--tRNA ligase
translation: MLDIKMIRSNPDEVKRALEKRGTQANLEEFLKLDEERRNLLVEVEQLKSLRNRESEEIARRKKQGEPADDLIRQMREVSDRIKEMDEKVKEIEEKLEQILLMIPNIPDESVPVGESDADNVEMRRWGEPRKFDFEPKPHWELGEALDILDFERASKITGSRFVVYKGAGARLERALINFMLDLHIEKHGYKEIFPPFIVNRASMTGTGQLPKFEEEAFKLFNNTDYFLIPTAEVPVTNLHANEILEKEDLPIYYVAYSGCFRAEAGSAGRDTRGIIRQHQFNKVELVKFTEPEKSMEELEKLTADAEEVLQLLGLPYRVVALCTGDLGFASSKTYDIEVWMPSYNRYVEISSCSNFKDYQARRANIRYRPEKGAKPQYVHTLNGSGLAVGRTTAAILENYQQPDGSVVIPEVLRPYMGGMEVIAKK
SIO_010081: TOCE_RS00925
subclass of: SO_0000673
so part of: TOCE_RS00925
location: 176305..177585
location: region:176305-177585:1
so has part: feature:176305-177585:1:exon

WP_013275017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176305-177585:1:exon

TOCE_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00930
old locus tag: Toce_0177
pseudo: true
so part of: sequence
location: complement(<177856..179208)
location: region:177856-179208:-1
so has part: feature:177856-179208:-1:exon
subclass of: SO_0000010

position:177856:-1
position: 177856
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:179208:-1
position: 179208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177856-179208:-1:exon

TOCE_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00930
old locus tag: Toce_0177
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012008915.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1182 family transposase
SIO_010081: TOCE_RS00930
subclass of: SO_0000673
so part of: TOCE_RS00930
location: complement(<177856..179208)
location: region:177856-179208:-1
so has part: feature:177856-179208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:177856-179208:-1:exon

TOCE_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00935
old locus tag: Toce_0178
so part of: sequence
location: complement(179345..179587)
location: region:179345-179587:-1
so has part: feature:179345-179587:-1:exon
subclass of: SO_0000010

position:179345:-1
position: 179345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179587:-1
position: 179587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179345-179587:-1:exon

TOCE_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00935
old locus tag: Toce_0178
inference: COORDINATES: protein motif:HMM:NF019199.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1540 domain-containing protein
translation: MARIHCSVSNCHYWKSGNICDASEIMITSDKLGDRMPDSFDAPQASNAPQTPVSSCMETCCKTFVESENAAKNIDGVYRK
SIO_010081: TOCE_RS00935
subclass of: SO_0000673
so part of: TOCE_RS00935
location: complement(179345..179587)
location: region:179345-179587:-1
so has part: feature:179345-179587:-1:exon

WP_013275019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179345-179587:-1:exon

TOCE_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00940
so part of: sequence
location: 179727..179915
location: region:179727-179915:1
so has part: feature:179727-179915:1:exon
subclass of: SO_0000010

position:179727:1
position: 179727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179915:1
position: 179915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179727-179915:1:exon

TOCE_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00940
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQNLAAHEALELHEVLSLKTLYMQKEIAYLDMAQDPDLKDLIKTGLIEGRQMITELQQAIG
SIO_010081: TOCE_RS00940
subclass of: SO_0000673
so part of: TOCE_RS00940
location: 179727..179915
location: region:179727-179915:1
so has part: feature:179727-179915:1:exon

WP_041423812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179727-179915:1:exon

TOCE_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00945
so part of: sequence
location: 179942..180214
location: region:179942-180214:1
so has part: feature:179942-180214:1:exon
subclass of: SO_0000010

position:179942:1
position: 179942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180214:1
position: 180214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179942-180214:1:exon

TOCE_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00945
inference: COORDINATES: protein motif:HMM:NF019490.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spore coat protein
translation: MIDDRAITLDLLNTAKAEVMAYARAVNEAANPQLRDVLAKQLQKAQEAHERIFNFAKKKGYYNAYASPDQMLNGDIQNATQLLNQITNLR
SIO_010081: TOCE_RS00945
subclass of: SO_0000673
so part of: TOCE_RS00945
location: 179942..180214
location: region:179942-180214:1
so has part: feature:179942-180214:1:exon

WP_041423813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179942-180214:1:exon

TOCE_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00950
old locus tag: Toce_0180
so part of: sequence
location: 180424..181236
location: region:180424-181236:1
so has part: feature:180424-181236:1:exon
subclass of: SO_0000010

position:180424:1
position: 180424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181236:1
position: 181236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180424-181236:1:exon

TOCE_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00950
old locus tag: Toce_0180
inference: COORDINATES: protein motif:HMM:NF022450.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid II flippase Amj family protein
translation: MEENVEKLIAVILFTATIHMIDTLSYSVRLAGIRTKRLAMALSLFNIIVLVARTANMIQAPLLGSIVDRAIAGGQVGMLLKGFRIIILSATVGSIIGAALIPSFVEIFSKGIMALERAGSVPGLLGTVVYQGSFRKIRRSLKKPGVGILKTLKLDRIPPTFLLLNLFITSVSTIGVLAAIYAGALVPDYRITASQLSGIINGAATILLAVVVDPQAAMITDQTLQGLRERQEANTMVVLLVAGKILGTLLSQLIFLPASQIVVFITRAIV
SIO_010081: TOCE_RS00950
subclass of: SO_0000673
so part of: TOCE_RS00950
location: 180424..181236
location: region:180424-181236:1
so has part: feature:180424-181236:1:exon

WP_041423814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180424-181236:1:exon

TOCE_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00955
old locus tag: Toce_0181
so part of: sequence
location: complement(181283..182674)
location: region:181283-182674:-1
so has part: feature:181283-182674:-1:exon
subclass of: SO_0000010

position:181283:-1
position: 181283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182674:-1
position: 182674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181283-182674:-1:exon

TOCE_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00955
old locus tag: Toce_0181
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777375.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLAHWIYALGTLAVVITMILRRNVVIPCILSTFLIGMIFTGSLVGAVTVVFKANLAALSELGSIFVIIGLMVAMLKSLSVTGADELLVSPLRKLMVSPLISYAILVLSTYIISLFFWPTPAVPLIGALLLPAAVKSGLPPMAAAVAIALAGQGMALSGDFVIQGAPGLSAKSAGIPVPLVTSDGAILSLVTGITAIIIAYLMMRKDIEKFRPEGMKEAAASSEVDAAMQVHAKERKGQNFAPFLAVLLVVAIAAVIFSMFRFNIKGGDASALLGGAAVLIMTVATLLVEGAMGLDKVADHLTDGFVFAFKVMGQILPIAGFFFLGNPEAVVKIMGEGAPGYLFDIGKMLADLIPAHGFLAAFGMLIIGIITGLDGSGFSGLPLTGTLAGAMAAGNQSVASALAAIGQMGAVWSGGGTIIAWSSLVAVAGIAGEPVLDLVRKNFIPVTIGLVVSTIVAVLFLM
SIO_010081: TOCE_RS00955
subclass of: SO_0000673
so part of: TOCE_RS00955
location: complement(181283..182674)
location: region:181283-182674:-1
so has part: feature:181283-182674:-1:exon

WP_013275021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181283-182674:-1:exon

TOCE_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00960
old locus tag: Toce_R0007
so part of: sequence
location: 183038..183112
location: region:183038-183112:1
so has part: feature:183038-183112:1:exon
subclass of: SO_0000663

position:183038:1
position: 183038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183112:1
position: 183112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183038-183112:1:exon

TOCE_RS00960
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 555079
locus tag: TOCE_RS00960
old locus tag: Toce_R0007
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:183070..183072,aa:Thr,seq:cgt)
SIO_010081: TOCE_RS00960
subclass of: SO_0000673
so part of: TOCE_RS00960
location: 183038..183112
location: region:183038-183112:1
so has part: feature:183038-183112:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183038-183112:1:exon

TOCE_RS12545
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12545
old locus tag: Toce_0182
pseudo: true
so part of: sequence
location: complement(183206..183931)
location: region:183206-183931:-1
so has part: feature:183206-183931:-1:exon
subclass of: SO_0000010

position:183206:-1
position: 183206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183931:-1
position: 183931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183206-183931:-1:exon

TOCE_RS12545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12545
old locus tag: Toce_0182
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: site-specific integrase
SIO_010081: TOCE_RS12545
subclass of: SO_0000673
so part of: TOCE_RS12545
location: complement(183206..183931)
location: region:183206-183931:-1
so has part: feature:183206-183931:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183206-183931:-1:exon

TOCE_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00970
old locus tag: Toce_0183
so part of: sequence
location: 184147..184485
location: region:184147-184485:1
so has part: feature:184147-184485:1:exon
subclass of: SO_0000010

position:184147:1
position: 184147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184485:1
position: 184485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184147-184485:1:exon

TOCE_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00970
old locus tag: Toce_0183
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015295839.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MVLVVILKALADENRLRILNLLRKGELCVCEIEAILEITQSNASRHLNKLKNAGIITYEKKSQWVYYKINETFVKDNALLFDYLNNYMDNNSQFLKDLQRLKEYKNNRITCA
SIO_010081: TOCE_RS00970
subclass of: SO_0000673
so part of: TOCE_RS00970
location: 184147..184485
location: region:184147-184485:1
so has part: feature:184147-184485:1:exon

WP_013275022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184147-184485:1:exon

TOCE_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: arsD
locus tag: TOCE_RS00975
old locus tag: Toce_0184
so part of: sequence
location: 184599..184919
location: region:184599-184919:1
so has part: feature:184599-184919:1:exon
subclass of: SO_0000010

position:184599:1
position: 184599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184919:1
position: 184919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184599-184919:1:exon

TOCE_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: arsD
locus tag: TOCE_RS00975
old locus tag: Toce_0184
inference: COORDINATES: protein motif:HMM:NF018637.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenite efflux transporter metallochaperone ArsD
translation: MKIEFYEPPMCCPTGLCGPTVDEKLVKLNENIEFLKKKYPGIEIQRYMITQQPLKFKENQSVYKLIQDKGKEALPITTFNGEVIKVGQYPSLEEMEKKIEESGRQV
SIO_010081: TOCE_RS00975
subclass of: SO_0000673
so part of: TOCE_RS00975
location: 184599..184919
location: region:184599-184919:1
so has part: feature:184599-184919:1:exon

WP_013275023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184599-184919:1:exon

TOCE_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00980
old locus tag: Toce_0185
so part of: sequence
location: 184919..185806
location: region:184919-185806:1
so has part: feature:184919-185806:1:exon
subclass of: SO_0000010

position:185806:1
position: 185806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184919-185806:1:exon

TOCE_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00980
old locus tag: Toce_0185
inference: COORDINATES: protein motif:HMM:TIGR00345.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ArsA family ATPase
translation: MRTKFIFFSGKGGVGKTSMACATAIYYADQGKKTLVVTTDPAANLSDVFEQEIGHKVTKINGIENLYAMEIDPDKATEEYKERCLAPMRELFDEEMLKIAEEQLSGPCTEEMAAFDKFIDFMEEDSYDMIIFDTAPTGHTIRLLELPVDWSRHIEESSKGSGQTCMGPVALIQESKKKYDDAVSKLRDLEQTDFIFVMQPEETSLKETIRSINELKEIGITTTKIIVNGLIPKEEAINPFFKSRYDMQQTYLSKAKDIFNNIPIQTMELFDSELRGLEMFRKVARRLFEGSDVHE
SIO_010081: TOCE_RS00980
subclass of: SO_0000673
so part of: TOCE_RS00980
location: 184919..185806
location: region:184919-185806:1
so has part: feature:184919-185806:1:exon

WP_013275024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184919-185806:1:exon

TOCE_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00985
old locus tag: Toce_0186
so part of: sequence
location: 185790..186692
location: region:185790-186692:1
so has part: feature:185790-186692:1:exon
subclass of: SO_0000010

position:185790:1
position: 185790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186692:1
position: 186692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185790-186692:1:exon

TOCE_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00985
old locus tag: Toce_0186
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013275024.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ArsA family ATPase
translation: MMCMSNIEKLIYPQNGKRKNIFFSGKGGVGKTSIACITAVQTSKKGFKTLLITTDPAAHIGNVLDKPVMDEITKIDGVENLYAVKIDQRKATEEYKNAILEDARKKFDINTVKAMEEELNSPCTEEMAAFQKFIDYACEENFDVIVFDTAPTGHTLRLLELPLDWSKQIQLKAGLTAEISEADKAQKERFDKVIEMMKDKETTTFSFVMYPEKTPIIEAYRASKELETIGIKTQLVVVNMIIPEEQAITPFFKNRRNMQMKYIEEIKERFKEAEILQVPLFEKEIKGLKMLTQISKILFS
SIO_010081: TOCE_RS00985
subclass of: SO_0000673
so part of: TOCE_RS00985
location: 185790..186692
location: region:185790-186692:1
so has part: feature:185790-186692:1:exon

WP_245523155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185790-186692:1:exon

TOCE_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS00990
old locus tag: Toce_0187
so part of: sequence
location: 186815..187039
location: region:186815-187039:1
so has part: feature:186815-187039:1:exon
subclass of: SO_0000010

position:186815:1
position: 186815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187039:1
position: 187039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186815-187039:1:exon

TOCE_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS00990
old locus tag: Toce_0187
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYDEFVEFIQNSDVKDKVDIKFIDVMEDSLDGYDAVKTMLEKGYGMPLTAVNGRLRFYGGISNEMFYEEIKKHL
SIO_010081: TOCE_RS00990
subclass of: SO_0000673
so part of: TOCE_RS00990
location: 186815..187039
location: region:186815-187039:1
so has part: feature:186815-187039:1:exon

WP_222927259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186815-187039:1:exon

TOCE_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: istA
locus tag: TOCE_RS00995
old locus tag: Toce_0188
so part of: sequence
location: 187335..188564
location: region:187335-188564:1
so has part: feature:187335-188564:1:exon
subclass of: SO_0000010

position:187335:1
position: 187335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188564:1
position: 188564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187335-188564:1:exon

TOCE_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: istA
locus tag: TOCE_RS00995
old locus tag: Toce_0188
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011344039.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MLGSGSIIMLHELRAMGKSIRAIARETGRSRNTVRKYLRAEGIPERKPHPKRGSKLDPYKDTIQELINLGIFNCEVIYERIKEEGYTGGRTILRDYVRQFRPPKQVPAVCRYETKPGQQAQVDWGEYTYIDEETGEIRKLYVFVMVLGYSRAIYVEFTNRCDIHTFIRCLIRGFEYFGGVTDIVLTDRMKTVILGTGENRKPIWNSIFEDLAVTLGFTPKVCRARRPQTKGKVESGIDFVKSNFLPGRKFINYGDLNHQAIVWCEKKNRRIHGTTGEKPIDRLKEENLKPLPASDRYQKFLEEVRKVHKDGLLSFNGVRYGVPWQYSGKEVVVRDKNGKIEILYDGKVIATHEKHYRSRTIVFLKGQYKGLKEAEGMFYPRPRAIKLSSLEVEKRSLGVYESLLEVGTV
SIO_010081: TOCE_RS00995
subclass of: SO_0000673
so part of: TOCE_RS00995
location: 187335..188564
location: region:187335-188564:1
so has part: feature:187335-188564:1:exon

WP_013275027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187335-188564:1:exon

TOCE_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: istB
locus tag: TOCE_RS01000
old locus tag: Toce_0189
so part of: sequence
location: 188561..189331
location: region:188561-189331:1
so has part: feature:188561-189331:1:exon
subclass of: SO_0000010

position:188561:1
position: 188561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189331:1
position: 189331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188561-189331:1:exon

TOCE_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: istB
locus tag: TOCE_RS01000
old locus tag: Toce_0189
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011344038.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MIDLEKARSHLEELGLLNAASFLDALLERAQRQNSTYLDFLNNLLEAELAERQRRNIEVRSKLARLPYRKTLTEFDFAFQPSIDEKLIKELATMAFVHRVENVIFLGPPGVGKTHLAVALAIEALSCGISVYFTSLSRLIEDLKKAYKESRLERRMRIYTRPKLLVIDEVGYLPLDGLGSNLFFQLISARYEKGSIILTSNKGFGEWGELMGDPVLATAVLDRLLHHAHIINIRGNSYRLKDRLKTGLYGNQHNNA
SIO_010081: TOCE_RS01000
subclass of: SO_0000673
so part of: TOCE_RS01000
location: 188561..189331
location: region:188561-189331:1
so has part: feature:188561-189331:1:exon

WP_013275028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188561-189331:1:exon

TOCE_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01005
old locus tag: Toce_0190
so part of: sequence
location: complement(189379..190245)
location: region:189379-190245:-1
so has part: feature:189379-190245:-1:exon
subclass of: SO_0000010

position:189379:-1
position: 189379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190245:-1
position: 190245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189379-190245:-1:exon

TOCE_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01005
old locus tag: Toce_0190
inference: COORDINATES: protein motif:HMM:NF033516.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MVIQMLLEQKHYPVSALCKITGISRSAYYKWRHREKSQNELQNEKLLVLIREAYEERDGILGYRQMTIKLRREHQLKVNHKRIYRLMKVMGLKSVCRKKKYNYIKSTPEVIAENVLNRDFKAEHTCEKWLTDVTEFKYGNGQKAYLSAILDLADRSIVSYVIGHSNNNALVFETFDLAVASHPDAKPIFHSDRGFQYTNKTFKSKLDKAGMTQSMSRVGRCIDNGPMEGFWGILKSEMYYLHKFDDYDSLKKAIEEYIDYYNTRRYQKRLKCMTPIEYRNYLSIADLN
SIO_010081: TOCE_RS01005
subclass of: SO_0000673
so part of: TOCE_RS01005
location: complement(189379..190245)
location: region:189379-190245:-1
so has part: feature:189379-190245:-1:exon

WP_281054646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189379-190245:-1:exon

TOCE_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01010
old locus tag: Toce_0191
so part of: sequence
location: complement(190272..190955)
location: region:190272-190955:-1
so has part: feature:190272-190955:-1:exon
subclass of: SO_0000010

position:190272:-1
position: 190272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190955:-1
position: 190955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190272-190955:-1:exon

TOCE_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01010
old locus tag: Toce_0191
inference: COORDINATES: protein motif:HMM:NF013677.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSRKPKVSFEQKLSAVKDYLKGRKTQRQIAKEYNVDHSSVRRWISNYQAMGESGLITSSKNTSYSQELKYTAVKEYLSGNASKLDICKKYKIRSTKQLSDWVLKYNGHERLKSSGSGGKPIMTKGRNTTLEERIQIVKYCLEHNRNYIETAEKYQVSYQQVRSWVIKYDKSGVDALIDRRGKRKSEDEFTEMDRLKAQNKLLEARNRWLEMENEVLKKLQEIEGGRY
SIO_010081: TOCE_RS01010
subclass of: SO_0000673
so part of: TOCE_RS01010
location: complement(190272..190955)
location: region:190272-190955:-1
so has part: feature:190272-190955:-1:exon

WP_013275030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190272-190955:-1:exon

TOCE_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01015
old locus tag: Toce_0192
so part of: sequence
location: complement(191205..192623)
location: region:191205-192623:-1
so has part: feature:191205-192623:-1:exon
subclass of: SO_0000010

position:191205:-1
position: 191205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192623:-1
position: 192623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191205-192623:-1:exon

TOCE_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01015
old locus tag: Toce_0192
inference: COORDINATES: protein motif:HMM:NF025017.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MTLPEKIYLFSVGLYIFFFLLFLRYFLWQHYAKKHYWSRRRLITLFELKKLAREKQKKLPMFSILVPAREEAEVIGQTIEHLARLNYPHHLLEIIVITDEKELQKGEPVTTQQVVEAKIREFRKRKSAPILKHVIVPYDFDGYFGGTCTGSAVPSTKGRALNYGLSFIDKNSDICGFYDAESHPELDVLLYIAYRWLISDKKDLIWQGPVFQVRNFFFLSPITKIASLYQALAHEWYLPVLMRQLPFVGGTNLFIESKLLKEIGGFDFNALTEDLEIGVRAFLERNAWPEYFPYVSTEQTPQSYRAFFRQRLRWASGHIQVVEKFKDASGYDNAKRNRIIRTLLLKGEVEWVLYQLAVLVPPTILLLSLQGLIKPVMLPEFLQYILKSFVFIYFGFTYYIYFRYSGYMKSRGLTKKLLALIELLILPVAAFLLPLPYSCAIVLRSLNRQPKAWCKTPRTREATDIAPTMHSQ
SIO_010081: TOCE_RS01015
subclass of: SO_0000673
so part of: TOCE_RS01015
location: complement(191205..192623)
location: region:191205-192623:-1
so has part: feature:191205-192623:-1:exon

WP_013275031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191205-192623:-1:exon

TOCE_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01020
old locus tag: Toce_0193
so part of: sequence
location: 192917..193834
location: region:192917-193834:1
so has part: feature:192917-193834:1:exon
subclass of: SO_0000010

position:192917:1
position: 192917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193834:1
position: 193834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192917-193834:1:exon

TOCE_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01020
old locus tag: Toce_0193
inference: COORDINATES: protein motif:HMM:NF024257.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: substrate-binding domain-containing protein
translation: MYRIRICKIVFLLVLSLTLGVFLAACGQKAPSEGNLGKNSESGEVILATTTSTQDSGLLDVLIPIFEQKTGYKVKIIPVGTGQALAMGEKGNADVMLVHAPEDEIELVEKGAAINRRLVMHNDFVIVGPAEDPAGIKNAKDAAEAFKLIAEKEALFISRGDNSGTHKKELDIWKKAGIENPSGKWYQSTGQGMGATLDVASEKSGYTLTDRATYLAKKDKLHLVILKEKDGSLINIYHVMQANPDYVKQSNPDAAGMINVEGARAFVEFMVAPETQKIIGEFGKDKFGQPLFIPDAGKSEDNILE
SIO_010081: TOCE_RS01020
subclass of: SO_0000673
so part of: TOCE_RS01020
location: 192917..193834
location: region:192917-193834:1
so has part: feature:192917-193834:1:exon

WP_013275032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192917-193834:1:exon

TOCE_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01025
old locus tag: Toce_0194
so part of: sequence
location: 193853..194560
location: region:193853-194560:1
so has part: feature:193853-194560:1:exon
subclass of: SO_0000010

position:193853:1
position: 193853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194560:1
position: 194560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193853-194560:1:exon

TOCE_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01025
old locus tag: Toce_0194
inference: COORDINATES: protein motif:HMM:NF038017.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MEAVMDGVKRALILLFTLDKEVYQITLFTLKVTGTATLISVVLSLPLAFLIALKDFPGKRLIISLANLGMGLPPTVVGLWVSLMLWRSGPFGRLRLIYTPKAMIIAQAVIAAPVILALSTAALQQLDKKLRWQIMALGATPIQMLFLMIREARYSLLAAVMAGFGAAVSEVGASMMVGGNIAGYTRVLTTAIVLETGKGNFDEALALSFILLLVSYLGTLWLTLLQQRRHKDVYN
SIO_010081: TOCE_RS01025
subclass of: SO_0000673
so part of: TOCE_RS01025
location: 193853..194560
location: region:193853-194560:1
so has part: feature:193853-194560:1:exon

WP_013275033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193853-194560:1:exon

TOCE_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01030
old locus tag: Toce_0195
so part of: sequence
location: 194547..195287
location: region:194547-195287:1
so has part: feature:194547-195287:1:exon
subclass of: SO_0000010

position:194547:1
position: 194547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195287:1
position: 195287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194547-195287:1:exon

TOCE_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01030
old locus tag: Toce_0195
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MYIIEGFDIQVRLKDKVLLDVNRVRLKRGEVFAVIGPNGAGKSTLLRVLALLQSPHKGEIYFAGEKVKPRDGIRLRRRMAVVFQEPLLLDTTVIDNVAVGLRIRGMPAKAAREKAEYWLEKFKVGKLSNRWVGSLSGGEAKRVSLARAFALEPEVLFLDEPFENLDAPLREALLADFSEVLRTTGITTFFVSHNLREVVLLADRVMALMEGRTVQEGAPRELIDNPANEELARFVGVWKRIMPGFF
SIO_010081: TOCE_RS01030
subclass of: SO_0000673
so part of: TOCE_RS01030
location: 194547..195287
location: region:194547-195287:1
so has part: feature:194547-195287:1:exon

WP_013275034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194547-195287:1:exon

TOCE_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01035
old locus tag: Toce_0196
so part of: sequence
location: 195380..195964
location: region:195380-195964:1
so has part: feature:195380-195964:1:exon
subclass of: SO_0000010

position:195380:1
position: 195380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195964:1
position: 195964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195380-195964:1:exon

TOCE_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01035
old locus tag: Toce_0196
inference: COORDINATES: protein motif:HMM:NF020893.2
GO component: GO:0005886 - plasma membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqaA family protein
translation: MTLVFMGELMDFFFRNGPLGLFIIAFTEATFFPIPPDVVLVYMAMVLPSKAYYYALITSIGSTLGGVFGYFLGVRFGRPLLMRFVKDSNFDRMEDMFQRYGAWAVAIAGFSVLPYKVFTIAAGVFRLDLMAFIIASLLSRSALYFLEAALVVIMGEKAPGLIDMILGPGSFVVIAATVLVYLAYKKWRNKKHKV
SIO_010081: TOCE_RS01035
subclass of: SO_0000673
so part of: TOCE_RS01035
location: 195380..195964
location: region:195380-195964:1
so has part: feature:195380-195964:1:exon

WP_013275035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195380-195964:1:exon

TOCE_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01040
old locus tag: Toce_0197
so part of: sequence
location: 196125..197456
location: region:196125-197456:1
so has part: feature:196125-197456:1:exon
subclass of: SO_0000010

position:196125:1
position: 196125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197456:1
position: 197456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196125-197456:1:exon

TOCE_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01040
old locus tag: Toce_0197
inference: COORDINATES: protein motif:HMM:NF012613.2
GO component: GO:0030115 - S-layer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-layer homology domain-containing protein
translation: MKKLIAGLLMIMLVVSLAAPVAQAKPKPCFKDVDERFEWARFSIEKMYAKGIIKGFPGGWFKPQDKVTHLQAIIMALRIMGWEDEVKKIKVLPKDVKNIKISGKDGYYYVALAIEKGLVKPEELKNFRPNEPAKRYEVAKYIVRAIGKEEEAKQHMTEKLPFKDAKAIPKDAVGYVYVMTELGLMKGYPGNVFQPNKPVTRAEMAVIINKLNDLLDEDDDKKEIRSLVVSIDVEALTITVKEGDKTATYNVKEDVPVYINYKYGSLSSLEPGDEVKLIFNDKREVVFIQVVNKKVTATAKGILVDVDKSKNTVSLFTYSGEETGYVGILRESDIEGRHLELETIDDRFVLVGETDGLKDYIGKKIVVLGEINDGVSIYMRGQVLDVDEWFAVTEKNTITFDVTGGTLVEVEGKPASLSDLEEGVYAEVKAQGDTALSIKVIKE
SIO_010081: TOCE_RS01040
subclass of: SO_0000673
so part of: TOCE_RS01040
location: 196125..197456
location: region:196125-197456:1
so has part: feature:196125-197456:1:exon

WP_013275036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196125-197456:1:exon

TOCE_RS12025
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12025
old locus tag: Toce_0198
so part of: sequence
location: 197599..197772
location: region:197599-197772:1
so has part: feature:197599-197772:1:exon
subclass of: SO_0000010

position:197599:1
position: 197599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197772:1
position: 197772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197599-197772:1:exon

TOCE_RS12025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12025
old locus tag: Toce_0198
inference: COORDINATES: protein motif:HMM:NF012613.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-layer homology domain-containing protein
translation: MGPAFRAKNALNITRAFAAPTKFTVSQRKYDWVWPYIEKMALMGVIAGKGKNTFGTR
SIO_010081: TOCE_RS12025
subclass of: SO_0000673
so part of: TOCE_RS12025
location: 197599..197772
location: region:197599-197772:1
so has part: feature:197599-197772:1:exon

WP_013275037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197599-197772:1:exon

TOCE_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01045
old locus tag: Toce_0199
so part of: sequence
location: 198351..198719
location: region:198351-198719:1
so has part: feature:198351-198719:1:exon
subclass of: SO_0000010

position:198351:1
position: 198351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198719:1
position: 198719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198351-198719:1:exon

TOCE_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01045
old locus tag: Toce_0199
inference: COORDINATES: protein motif:HMM:NF012301.2
GO function: GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MGYKRKILVVDDQEWVRKMLLEALAVLGYEAFGASSGPEALQLAVEKEPDLAVIDVSIPGMDGLTLLSKFREKDLKIPGILISGNGEKNCIEKALKEGAFAYLVKPFDIGDLEGLIKQALTS
SIO_010081: TOCE_RS01045
subclass of: SO_0000673
so part of: TOCE_RS01045
location: 198351..198719
location: region:198351-198719:1
so has part: feature:198351-198719:1:exon

WP_013275038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198351-198719:1:exon

TOCE_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01050
old locus tag: Toce_0200
so part of: sequence
location: 198745..199710
location: region:198745-199710:1
so has part: feature:198745-199710:1:exon
subclass of: SO_0000010

position:198745:1
position: 198745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199710:1
position: 199710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198745-199710:1:exon

TOCE_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01050
old locus tag: Toce_0200
inference: COORDINATES: protein motif:HMM:NF014567.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MYYGQSEPNSELIRGQKIYEDLFTNKDYSIPGYPELFMKEGNHRIVIKIQNEEDEENHHSFNINTTLVKNADGTVSVVITCEDEDNSEGVREDLKRRLSYLENLSVIGELAASAVHEIKNPLFSIRGFLQIIDNSFSDDDKRKEYIRIMISEIDRLEGLVRDFLMLAKTRARSKGSVIVCELIRDIAELYKNRMEMQNIKFSLMAEDESVCIPGNREQLEQVFINLIQNALEAMENGGNIEVVVYRKNEKLVIEVRDEGKGISPEIEKKIFTPFFTNKKNGTGLGLFLSKKIVEEHMGRIYFRSTEGKGTVFFLEFPLVKT
SIO_010081: TOCE_RS01050
subclass of: SO_0000673
so part of: TOCE_RS01050
location: 198745..199710
location: region:198745-199710:1
so has part: feature:198745-199710:1:exon

WP_013275039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198745-199710:1:exon

TOCE_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: rho
locus tag: TOCE_RS01055
old locus tag: Toce_0201
so part of: sequence
location: 199919..201184
location: region:199919-201184:1
so has part: feature:199919-201184:1:exon
subclass of: SO_0000010

position:199919:1
position: 199919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201184:1
position: 201184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199919-201184:1:exon

TOCE_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: rho
locus tag: TOCE_RS01055
old locus tag: Toce_0201
EC number: 3.6.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777443.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor Rho
translation: MLASELEKKTIAQLHEIAREKKIPGYYKYRKKELIIKIMEAMAAESGDSIAEGVLEVLPDGYGFLRIENYLPSDEDIYISPSQIRRFHLRTGDLISGRIRQPKEGEKYRALLQVHAVNGLDPEHAVKRFHFDSLTPIFPQPKLTLEHDPEELSTRIIDIISPIGKGQRALIVSPPKAGKTMMLKKIANALSKNHPDLELIVLLIDERPEEVTDMRRSVDGEVVSSTFDEPPENHLRVADMVLERAQRLVESKKDVVILLDSITRLARANNLVVPPTGRTLSGGLDPSALHKPKRFFGAARNIEEGGSLTIIATALVETGSRMDDVIYEEFKGTGNMEIHLDRKLAERRIYPAIDIKKSGTRREELLLSKEELEAVWVLRKALAPLDTVEAASTLISRLKRTKTNREFLENLAATLNELQLT
SIO_010081: TOCE_RS01055
subclass of: SO_0000673
so part of: TOCE_RS01055
location: 199919..201184
location: region:199919-201184:1
so has part: feature:199919-201184:1:exon

WP_013275040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199919-201184:1:exon

TOCE_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01060
old locus tag: Toce_0202
so part of: sequence
location: complement(201190..201516)
location: region:201190-201516:-1
so has part: feature:201190-201516:-1:exon
subclass of: SO_0000010

position:201190:-1
position: 201190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201516:-1
position: 201516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201190-201516:-1:exon

TOCE_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01060
old locus tag: Toce_0202
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777444.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MazG-like family protein
translation: MTCEKQSNFKVISLPRLNGLTPTLESTALKLMEEAGELAQAIGKFRASSGENIKMDEKEVVDMMARELLDVAQVAVSMMFVLEENYQIDLDEKIRQHIEKLKAKGYLK
SIO_010081: TOCE_RS01060
subclass of: SO_0000673
so part of: TOCE_RS01060
location: complement(201190..201516)
location: region:201190-201516:-1
so has part: feature:201190-201516:-1:exon

WP_013275041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201190-201516:-1:exon

TOCE_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01065
old locus tag: Toce_0203
so part of: sequence
location: complement(201513..201959)
location: region:201513-201959:-1
so has part: feature:201513-201959:-1:exon
subclass of: SO_0000010

position:201513:-1
position: 201513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201959:-1
position: 201959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201513-201959:-1:exon

TOCE_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01065
old locus tag: Toce_0203
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777445.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside recognition domain-containing protein
translation: MLKEATVGSLLSIKQIAVIVIPIMVAMEFLKDLGALDRIANFFSPLVRVFGMRKESGFPLIIGIIIGLSYGAGVIFRSAKEYQLPRRDLYLITYFLVAAHAVFEDTAIFVALGVNGALLLTTRLLVAALFTFLASKLMRQELEEEVNL
SIO_010081: TOCE_RS01065
subclass of: SO_0000673
so part of: TOCE_RS01065
location: complement(201513..201959)
location: region:201513-201959:-1
so has part: feature:201513-201959:-1:exon

WP_245523157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201513-201959:-1:exon

TOCE_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01070
old locus tag: Toce_0204
so part of: sequence
location: complement(201983..202420)
location: region:201983-202420:-1
so has part: feature:201983-202420:-1:exon
subclass of: SO_0000010

position:201983:-1
position: 201983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202420:-1
position: 202420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201983-202420:-1:exon

TOCE_RS01070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01070
old locus tag: Toce_0204
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777446.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside recognition protein
translation: MGSPSSSISLDTLRRGLQSGIEVTWQLARILIPVYFIVTFLKHTPILGVVTRLFAPLMGIFGLPGEAALVLVIGNLVNLYAAIGAMLSLSLSLKEITVLAIMLSFCHSLPVETALAKNIGLSAVNVIAVRVGLAVLSGIAYNFIF
SIO_010081: TOCE_RS01070
subclass of: SO_0000673
so part of: TOCE_RS01070
location: complement(201983..202420)
location: region:201983-202420:-1
so has part: feature:201983-202420:-1:exon

WP_013275043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201983-202420:-1:exon

TOCE_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01075
old locus tag: Toce_0205
so part of: sequence
location: 202765..204384
location: region:202765-204384:1
so has part: feature:202765-204384:1:exon
subclass of: SO_0000010

position:202765:1
position: 202765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204384:1
position: 204384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202765-204384:1:exon

TOCE_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01075
old locus tag: Toce_0205
inference: COORDINATES: protein motif:HMM:NF014598.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon starvation protein A
translation: MNSLVLLILGAVLFLIAYATYGAYLARQWGLDPSRKTPAHELYDGVDYVPANRYVLLGHHFASIAGAGPIAGPIQAAIFGWLPVYLWIVLGSIFVGGVHDFGSLLASIRHRGKSIGEIIEANIGTSGKKLFNIFAWLTLILVVAAFASITAEAFAATPAAGTASVLFIFIAMLFGQLVYRRNAGLAVSTIIGVALIFLSVWIGYRYPFMQFDKTSWQYILLVYIFFASVLPVWLLLQPRDYLNSFLLYAMLIGGAIGIILMHPTLQLSPFKGFTVLTGAGAQYLFPMVFVTVACGACSGFHSLVGSGTTSKQLSSENDARFVGYGAMLIEGFLAIVALISVAYVSKAEGSPAEVFANGVAEFMTSFGVPADFGKVFITLAFTAFALTSLDTATRLARYIFQEYFETEDGKRSLLTDKYVATLITIFVAYLLVTYGYQKIWPIFGSANQLLSALALLALTAWFVRTRRNPVMTFIPMIWMFAVTLSATVLLMKNFYVARNYVLVVLAAALFVLAIILMAVTYTTLKGAKKSEKGTTFKAG
SIO_010081: TOCE_RS01075
subclass of: SO_0000673
so part of: TOCE_RS01075
location: 202765..204384
location: region:202765-204384:1
so has part: feature:202765-204384:1:exon

WP_013275044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202765-204384:1:exon

TOCE_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01080
old locus tag: Toce_0206
so part of: sequence
location: 204462..204962
location: region:204462-204962:1
so has part: feature:204462-204962:1:exon
subclass of: SO_0000010

position:204462:1
position: 204462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204962:1
position: 204962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204462-204962:1:exon

TOCE_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01080
old locus tag: Toce_0206
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDSGKYLEMLSKRLKPYFDLEKKRIISGERADLFARCHVKHVRTFLTPKDVIDSYETNEYFVVKIFEGKLKEEALFLFDTFLKDIMKIYVTPGDGHMCSIINGVMVLEEGLDGEVEKKIRGYSYEKSYLFSLKGWSRINLAAVDLKSGRIIPSRGAKKLEKLLMPG
SIO_010081: TOCE_RS01080
subclass of: SO_0000673
so part of: TOCE_RS01080
location: 204462..204962
location: region:204462-204962:1
so has part: feature:204462-204962:1:exon

WP_013275045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204462-204962:1:exon

TOCE_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01085
old locus tag: Toce_0207
so part of: sequence
location: 205044..206774
location: region:205044-206774:1
so has part: feature:205044-206774:1:exon
subclass of: SO_0000010

position:205044:1
position: 205044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206774:1
position: 206774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205044-206774:1:exon

TOCE_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01085
old locus tag: Toce_0207
EC number: 2.7.13.3
inference: COORDINATES: protein motif:HMM:NF019314.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sensor histidine kinase
translation: MVYSILAGLADRLGLFIVIAYLLSKNRAFKNLILKHRVSLLDKILLSAVFGAFGILGTYMGIPVYGALANSRAVGVIIGGLLGGPLVGVLSGFVAGFHRWAIDVGGFTALACGLSTFTEGTIAGLLHRKLNHGKICWKTALFIGMALELLQMVIILLVAKPFSAALALVKVIGFPMTSVNAIGIAIFIIIVENIFREQERVGAYQAQLALDIASETLPYLRQGLSEFSAYRTAKIIYEKADYDAVAITDNRQILAHIGVGEDHHRNGLKVLTRATRRALETGECQIASNKEEIECSNGECPLKSAVIVPLVEKDRVIGCLKLYRTRDNSITSIDIRLAQGLAQLFSTQLELSRMEHQARLLAKAELRALQSQINPHFLFNALNTIVSICRKDPEQARALLIYLGEFFRKNLSSGRELVPLEQEIEHVKAYLAIEQARFGERLKVVFEIDPVTGVMVPPLILQPLVENAVKHGLLPKKEGGTVIIKAKNVTGGMEITVADDGMGMDEDTLKGILLHRVSSDRIGLCNVNERLESLYGEESRLKVSSKPMLGTVVKFFIPAAAENWREADGAYGATGR
SIO_010081: TOCE_RS01085
subclass of: SO_0000673
so part of: TOCE_RS01085
location: 205044..206774
location: region:205044-206774:1
so has part: feature:205044-206774:1:exon

WP_013275046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205044-206774:1:exon

TOCE_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01090
old locus tag: Toce_0208
so part of: sequence
location: 206746..207510
location: region:206746-207510:1
so has part: feature:206746-207510:1:exon
subclass of: SO_0000010

position:206746:1
position: 206746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207510:1
position: 207510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206746-207510:1:exon

TOCE_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01090
old locus tag: Toce_0208
inference: COORDINATES: protein motif:HMM:NF016296.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LytTR family DNA-binding domain-containing protein
translation: MELTVLLVDDESPARDELRYLLEAYPEINVVGEASSGQEAIDKIIELNPDVVFLDIKLWDMDGFEVARRVFEKGRTPFIIFATAHDEYAVKAFEVNALDYILKPFSAGRLEKTVQKIIDIFKNQRKREGVLRISEYLGMREKPSCNKLSFWKNERIYLICPEDICYCVAVEKGSIVKAKQGEFNTTSTLSELEKKINSPNFFRTHKSYLVNLDRVKEIIPWFNGTFILSIQGYEKDEVPVSRRQARILRRLFDI
SIO_010081: TOCE_RS01090
subclass of: SO_0000673
so part of: TOCE_RS01090
location: 206746..207510
location: region:206746-207510:1
so has part: feature:206746-207510:1:exon

WP_013275047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206746-207510:1:exon

TOCE_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01095
old locus tag: Toce_0209
so part of: sequence
location: 207673..207861
location: region:207673-207861:1
so has part: feature:207673-207861:1:exon
subclass of: SO_0000010

position:207673:1
position: 207673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207861:1
position: 207861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207673-207861:1:exon

TOCE_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01095
old locus tag: Toce_0209
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778889.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin
translation: MKLYVDQDLCISCGLCIDACPSVFSWNDEGKSVAIDGEVPADAENEAREALENCPTEAIKEA
SIO_010081: TOCE_RS01095
subclass of: SO_0000673
so part of: TOCE_RS01095
location: 207673..207861
location: region:207673-207861:1
so has part: feature:207673-207861:1:exon

WP_013275048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207673-207861:1:exon

TOCE_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01100
old locus tag: Toce_0210
so part of: sequence
location: complement(208133..209227)
location: region:208133-209227:-1
so has part: feature:208133-209227:-1:exon
subclass of: SO_0000010

position:208133:-1
position: 208133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209227:-1
position: 209227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208133-209227:-1:exon

TOCE_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01100
old locus tag: Toce_0210
EC number: 6.3.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777484.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-alanine--D-alanine ligase family protein
translation: MEKLKVGVVFGGQSGEYEVSLMSATSIINAMDKSKYDIVPIGITKDGRWHVFLGDVSKIQDGTWVDEAIPAFLPPDTGYKCAITLKDGIETRYHLDVIFPVLHGPHGEDGTVQGVFELMNIPYVSSGVGPSAVCMDKVYTKKLLKQEGLPVVDFKVFYKKDLPHKLTEMVEEVEKSFGYPCFVKPANLGSSVGITKAHDREELKNAIMHAAEFDRKLLVERFIPAREIECSVLGNDDPVASVPGEIIPSEEFYSYTAKYFDGGKSKLLIPAPLAAEETEKIRNLAVRAYKALDCTVMARVDFLISKITGVAYINELNTIPGFTKISMYPKLWEASGLPYKELIDRLIELAIERHHQKHALKLTL
SIO_010081: TOCE_RS01100
subclass of: SO_0000673
so part of: TOCE_RS01100
location: complement(208133..209227)
location: region:208133-209227:-1
so has part: feature:208133-209227:-1:exon

WP_013275049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208133-209227:-1:exon

TOCE_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01105
old locus tag: Toce_0211
so part of: sequence
location: 209484..209630
location: region:209484-209630:1
so has part: feature:209484-209630:1:exon
subclass of: SO_0000010

position:209484:1
position: 209484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209630:1
position: 209630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209484-209630:1:exon

TOCE_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01105
old locus tag: Toce_0211
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777485.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKNRIRVLEEERDRLLTQWMKNKENRIKLLVRIMELEEQIEALKNSA
SIO_010081: TOCE_RS01105
subclass of: SO_0000673
so part of: TOCE_RS01105
location: 209484..209630
location: region:209484-209630:1
so has part: feature:209484-209630:1:exon

WP_013275050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209484-209630:1:exon

TOCE_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01110
old locus tag: Toce_0212
so part of: sequence
location: complement(209653..210072)
location: region:209653-210072:-1
so has part: feature:209653-210072:-1:exon
subclass of: SO_0000010

position:209653:-1
position: 209653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210072:-1
position: 210072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209653-210072:-1:exon

TOCE_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01110
old locus tag: Toce_0212
inference: COORDINATES: protein motif:HMM:NF017020.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HEPN domain-containing protein
translation: MTNVTLAESYLQKARVRLKMIKFLLEEEAYSDIIREAQEAVELALKGILRKIGVEPPKQHDVGYLLFEYRDKLPAEVAERVDKLASISKWLRKEREFSFYGDVDFIPTLEYTREDAEKAYGDLKTVIEAAEKVILPKNK
SIO_010081: TOCE_RS01110
subclass of: SO_0000673
so part of: TOCE_RS01110
location: complement(209653..210072)
location: region:209653-210072:-1
so has part: feature:209653-210072:-1:exon

WP_013275051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209653-210072:-1:exon

TOCE_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01115
old locus tag: Toce_0213
so part of: sequence
location: complement(210069..210560)
location: region:210069-210560:-1
so has part: feature:210069-210560:-1:exon
subclass of: SO_0000010

position:210069:-1
position: 210069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210560:-1
position: 210560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210069-210560:-1:exon

TOCE_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01115
old locus tag: Toce_0213
EC number: 2.7.7.-
inference: COORDINATES: protein motif:HMM:NF014021.2
GO function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase domain-containing protein
translation: MLLESFSNTLNRVLEACRKIYGEDLITLAVFGSVARGTPNPDSDIDLLIVARNLPSGRLKRMEQFAKVEELLIPWMDSLRKIGINTYLSPVIKTPEEVFAGSLLFLDMIDDALILYDRENFFTRFLQEFSSKLKRLGAKKVVTGERWHWVLKPDYKHGEVFDI
SIO_010081: TOCE_RS01115
subclass of: SO_0000673
so part of: TOCE_RS01115
location: complement(210069..210560)
location: region:210069-210560:-1
so has part: feature:210069-210560:-1:exon

WP_013275052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210069-210560:-1:exon

TOCE_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01120
old locus tag: Toce_0214
so part of: sequence
location: 210882..212039
location: region:210882-212039:1
so has part: feature:210882-212039:1:exon
subclass of: SO_0000010

position:210882:1
position: 210882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212039:1
position: 212039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210882-212039:1:exon

TOCE_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01120
old locus tag: Toce_0214
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777479.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-containing alcohol dehydrogenase
translation: MKLDFQFFVPTRILFGRGRVREAGNYGKGLGKKALVVTGKSSARKSGSLDKLTKSLEENGVEWVLFDGVEPNPLTTTIDRGAVFARENKVDLVIGLGGGSAMDTAKGIAFAAANDGPIVDYMEGRTGEKALPLILIPTTSGTGSEANNIAVMTNPVTMVKKGFRNPSIFAVVSIVDPDLTATMPRKVTASTGIDAFFHAVESILSLRCQPFTEILSLKAIELIYNNIMKACADGKDSDSREAMALASTMAGMALGQSGVCLLHGMEHPLSSYYGASHGEGLAPLAGAFLRFVKPFASERLAKVAKAMGLDVEGLSADEAAQKAVEAVEQMLKELGLPDSISQFGVKEEDIEKLAQHVYKYMGHNLETTPGSPGYEDIKRMYLESL
SIO_010081: TOCE_RS01120
subclass of: SO_0000673
so part of: TOCE_RS01120
location: 210882..212039
location: region:210882-212039:1
so has part: feature:210882-212039:1:exon

WP_245523134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210882-212039:1:exon

TOCE_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01125
old locus tag: Toce_0215
so part of: sequence
location: complement(212075..213250)
location: region:212075-213250:-1
so has part: feature:212075-213250:-1:exon
subclass of: SO_0000010

position:212075:-1
position: 212075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213250:-1
position: 213250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212075-213250:-1:exon

TOCE_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01125
old locus tag: Toce_0215
inference: COORDINATES: protein motif:HMM:NF012955.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FprA family A-type flavoprotein
translation: MAAFKVSENVYWVGVNDWALKDFHGLYVPRGGSYNSYLILGEKKALIDTVYKRFTGDFIRKISEVTPLEEIDYVVANHSEVDHSSSLPEVLKAAPRAKVVTNKKCQAMLQRLFGIPSNRFFPVKNGDKLSLGNFTLQFIEQPMVHWPETMFTYLMEEKVLFPCDFLGTQMAASPLLVEDTSDFTADSRAYYTFIMRPFNEQVLKGVHKVRELSPQIVAPSHGPVLKGTAVEQILKKYEIWSTSPETRKVVIPYVSLWGGTGRMAELIAEGVELAGVPVKVMNLTSTPMSEVISEALEAKFLAVGSPTLVKGIHPLISAFLVFLEMIKPGNKKGMVFGTFGWNGNAGKITHEMMEKMGVRMVEDPLLLYLTPTPEDCLLLIEKGKTIAAALE
SIO_010081: TOCE_RS01125
subclass of: SO_0000673
so part of: TOCE_RS01125
location: complement(212075..213250)
location: region:212075-213250:-1
so has part: feature:212075-213250:-1:exon

WP_013275054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212075-213250:-1:exon

TOCE_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01130
old locus tag: Toce_0216
so part of: sequence
location: complement(213262..213765)
location: region:213262-213765:-1
so has part: feature:213262-213765:-1:exon
subclass of: SO_0000010

position:213262:-1
position: 213262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213765:-1
position: 213765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213262-213765:-1:exon

TOCE_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01130
old locus tag: Toce_0216
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777406.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferritin family protein
translation: MKEALEKALNFEKEGFEFYKKIAAEMQNPLAKRLFESLAEQEKEHMKKIKEIYESLDFAASSNQPATAAGIEEELKKIFFELEESRRKMPLDHLEGYKLAMEMEKKGYNMYREFTQTAASESEKKFFEALMQEEKEHLNSLDNVYRFLTDTPTWYSEEESRVWNWMV
SIO_010081: TOCE_RS01130
subclass of: SO_0000673
so part of: TOCE_RS01130
location: complement(213262..213765)
location: region:213262-213765:-1
so has part: feature:213262-213765:-1:exon

WP_013275055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213262-213765:-1:exon

TOCE_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01135
old locus tag: Toce_0217
so part of: sequence
location: complement(213768..214979)
location: region:213768-214979:-1
so has part: feature:213768-214979:-1:exon
subclass of: SO_0000010

position:213768:-1
position: 213768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214979:-1
position: 214979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213768-214979:-1:exon

TOCE_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01135
old locus tag: Toce_0217
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777481.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MARLLILGNGIAAVSAAEAFRQHDSSTPITIVSEEPHYAYYRLRLSKYLGENPSEEDMLIHQPGWYAENGIEVLLDRKAVSIDTVRCKVTLDDGSDIGYSSLLIATGSSPFKPPVPGCELKGVFSIRTLDDVKNLYKYSKERNTGVVIGGGVLGLEAAWSLAKKGKKIYVVEGNPYILSKQLDEQASEILKSLGEKAGIEFLLSNRLERVLGDTEARGIVLRDGRELKVDFVILSTGVKPNTGLLEGSGIAVARGIIVDEFMRTNLEGVYAAGDVAEYRGQVHGIWPMAREQGKTAGLNLAGIKTQYNEVVPSNYIKVFETEIFSAGDLCKAGDAEAEILDFSPEENIYRKIFFKGNRAVGVILLGDVKAGTRMARGIKSGRHLPDSLLKNTTFDEIIEKMEE
SIO_010081: TOCE_RS01135
subclass of: SO_0000673
so part of: TOCE_RS01135
location: complement(213768..214979)
location: region:213768-214979:-1
so has part: feature:213768-214979:-1:exon

WP_041423979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213768-214979:-1:exon

TOCE_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01140
old locus tag: Toce_0218
so part of: sequence
location: complement(215027..215185)
location: region:215027-215185:-1
so has part: feature:215027-215185:-1:exon
subclass of: SO_0000010

position:215027:-1
position: 215027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215185:-1
position: 215185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215027-215185:-1:exon

TOCE_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01140
old locus tag: Toce_0218
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005658603.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rubredoxin
translation: MKKWVCSVCGYVYDPAIGDPENGIEPGTAFEDLPDDWVCPECGVGKDMFEEE
SIO_010081: TOCE_RS01140
subclass of: SO_0000673
so part of: TOCE_RS01140
location: complement(215027..215185)
location: region:215027-215185:-1
so has part: feature:215027-215185:-1:exon

WP_013275057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215027-215185:-1:exon

TOCE_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01145
old locus tag: Toce_0219
pseudo: true
so part of: sequence
location: <215560..216054
location: region:215560-216054:1
so has part: feature:215560-216054:1:exon
subclass of: SO_0000010

position:215560:1
position: 215560
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:216054:1
position: 216054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215560-216054:1:exon

TOCE_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01145
old locus tag: Toce_0219
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011343704.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: TOCE_RS01145
subclass of: SO_0000673
so part of: TOCE_RS01145
location: <215560..216054
location: region:215560-216054:1
so has part: feature:215560-216054:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215560-216054:1:exon

TOCE_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01150
so part of: sequence
location: complement(216191..216574)
location: region:216191-216574:-1
so has part: feature:216191-216574:-1:exon
subclass of: SO_0000010

position:216191:-1
position: 216191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216574:-1
position: 216574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216191-216574:-1:exon

TOCE_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01150
inference: COORDINATES: protein motif:HMM:NF012436.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferritin-like domain-containing protein
translation: MLEELNAEPSTAKPPENQEPENTTSKLTESQAAILQRALEHEYTSILQYLYHHFTINTGDELEDFAIDEMKHMGWFAETLAEKGFQPQLIHSPLESDAGPEQSIKATFPGKLTPSKNIHPLKKNLRI
SIO_010081: TOCE_RS01150
subclass of: SO_0000673
so part of: TOCE_RS01150
location: complement(216191..216574)
location: region:216191-216574:-1
so has part: feature:216191-216574:-1:exon

WP_041423816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216191-216574:-1:exon

TOCE_RS12225
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12225
so part of: sequence
location: complement(216802..216948)
location: region:216802-216948:-1
so has part: feature:216802-216948:-1:exon
subclass of: SO_0000010

position:216802:-1
position: 216802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216948:-1
position: 216948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216802-216948:-1:exon

TOCE_RS12225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12225
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADIIEAVKKDIEDEHAAIIQYLSHAYTSPDEELRGKLESIASTRCGF
SIO_010081: TOCE_RS12225
subclass of: SO_0000673
so part of: TOCE_RS12225
location: complement(216802..216948)
location: region:216802-216948:-1
so has part: feature:216802-216948:-1:exon

WP_187286575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216802-216948:-1:exon

TOCE_RS12720
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12720
old locus tag: Toce_0221
so part of: sequence
location: 217057..217581
location: region:217057-217581:1
so has part: feature:217057-217581:1:exon
subclass of: SO_0000010

position:217057:1
position: 217057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217581:1
position: 217581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217057-217581:1:exon

TOCE_RS12720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12720
old locus tag: Toce_0221
EC number: 2.1.1.63
inference: COORDINATES: protein motif:HMM:NF014870.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methylated-DNA--[protein]-cysteine S-methyltransferase
translation: MVYFRKINTAIGVIMVASTERGVCRIALPGENMESFINDLKKMYGGAELVDESVRGKSSEINFLAEQELTAYFNRELKNFTVPLDLKGTEFQKKVWKEVMKIPYGEVRSYGYIARAIGKPKACRAVGGANNRNPVPIIVPCHRVVGNDGSLVGYGGGLEMKSFLLKLEGIKREF
SIO_010081: TOCE_RS12720
subclass of: SO_0000673
so part of: TOCE_RS12720
location: 217057..217581
location: region:217057-217581:1
so has part: feature:217057-217581:1:exon

WP_013275059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217057-217581:1:exon

TOCE_RS12725
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12725
old locus tag: Toce_0222
so part of: sequence
location: 217605..217733
location: region:217605-217733:1
so has part: feature:217605-217733:1:exon
subclass of: SO_0000010

position:217605:1
position: 217605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217733:1
position: 217733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217605-217733:1:exon

TOCE_RS12725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12725
old locus tag: Toce_0222
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVRSKDLMNWTGQEVVLDEHVYYGAADTCIGVAAVEKEKVKF
SIO_010081: TOCE_RS12725
subclass of: SO_0000673
so part of: TOCE_RS12725
location: 217605..217733
location: region:217605-217733:1
so has part: feature:217605-217733:1:exon

WP_013275060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217605-217733:1:exon

TOCE_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01160
old locus tag: Toce_0223
so part of: sequence
location: 217866..218141
location: region:217866-218141:1
so has part: feature:217866-218141:1:exon
subclass of: SO_0000010

position:217866:1
position: 217866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218141:1
position: 218141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217866-218141:1:exon

TOCE_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01160
old locus tag: Toce_0223
inference: COORDINATES: protein motif:HMM:NF014912.2
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferritin family protein
translation: MSEEKVMHYEENCQMTLPEMLREGIIGELQAINQYERYARMTCYEPARQLFQEIADDEKHHVAELMKMLAQCDKRQAEELRRAFMHHPGKY
SIO_010081: TOCE_RS01160
subclass of: SO_0000673
so part of: TOCE_RS01160
location: 217866..218141
location: region:217866-218141:1
so has part: feature:217866-218141:1:exon

WP_013275061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217866-218141:1:exon

TOCE_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01165
old locus tag: Toce_0224
so part of: sequence
location: 218405..219307
location: region:218405-219307:1
so has part: feature:218405-219307:1:exon
subclass of: SO_0000010

position:218405:1
position: 218405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219307:1
position: 219307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218405-219307:1:exon

TOCE_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01165
old locus tag: Toce_0224
inference: COORDINATES: protein motif:HMM:NF015995.2
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine betaine ABC transporter substrate-binding protein
translation: MRKCVLLFISVLLIFSLTACSLGGRAEKGKIVVAGKKFTEQVILTHLLAEYLKAKMDLDVQVKEGLGSTFILHQALVRGDVDLYVEYTGTGYLNILKNKYNPSQTPDEIYEATKKGYKEKYNIAWLKPLGFNNTYALALRKELADQLNVKTCSDLVKHSNKLVFGADAEFFERSDGYDALVDTYGFNFKRAMNIDPDLQYEAAQKGDIDVITAFTTDARIKQFGLTVLKDDKNFFPPYYAVPIVRQEVLDANPGLEEALNKLEGILTDEKMMELNAQVNIEGKSPKQVAIDFLKSEGLID
SIO_010081: TOCE_RS01165
subclass of: SO_0000673
so part of: TOCE_RS01165
location: 218405..219307
location: region:218405-219307:1
so has part: feature:218405-219307:1:exon

WP_013275062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218405-219307:1:exon

TOCE_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01170
old locus tag: Toce_0225
so part of: sequence
location: 219333..220460
location: region:219333-220460:1
so has part: feature:219333-220460:1:exon
subclass of: SO_0000010

position:219333:1
position: 219333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220460:1
position: 220460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219333-220460:1:exon

TOCE_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01170
old locus tag: Toce_0225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013276907.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: betaine/proline/choline family ABC transporter ATP-binding protein
translation: MICFENVYKEYDDGFVALKNINLEIKKGELVTLIGPSGCGKTTTLRMINRLTEPTSGTVYIDGQDISKIDPVELRRNIGYVVQQIGLFPHMTIAENIALVPKLKKWKPSAYEKRVDELLDLVGLDPATFKHRYPAELSGGQQQRVGVIRALAAEPDIILMDEPFSALDPISREQLQDDIVKLQEEIHKTIVFVTHDMDEAIKIANRIAIMKDGEIVQFDTPDKILRHPANSFVRDFIGENRLVQDHTIVPKAKDLMYTSVVTTSPKRGLAEAFRLMKEKKVDSLVVTDKNKSFLGVVTLKELEEHYQNENLLVADIADRDVPTLTIDADVTNVAEIFRNKDVSAIPVLDGNRLVGIITRSSMMRGLAEWEFRKKQ
SIO_010081: TOCE_RS01170
subclass of: SO_0000673
so part of: TOCE_RS01170
location: 219333..220460
location: region:219333-220460:1
so has part: feature:219333-220460:1:exon

WP_013275063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219333-220460:1:exon

TOCE_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01175
old locus tag: Toce_0226
so part of: sequence
location: 220474..221115
location: region:220474-221115:1
so has part: feature:220474-221115:1:exon
subclass of: SO_0000010

position:220474:1
position: 220474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221115:1
position: 221115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220474-221115:1:exon

TOCE_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01175
old locus tag: Toce_0226
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013276908.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MDLLNTFIERKQDILIAFQEHVFLSGIAMAIAIAVAVPLGIALTRYKKLAEPIIGIAAIIQTIPSLALLGFMLPIFGIGKLPAIIALTLYALLPILRNTYTGILGVDPALIDVGKGMGMTSRQILWMVELPLSLPVIMAGVRTATVLTIGVAALATFIGAGGLGDLIDRGLRVADRNLILAGAIPAAILAILFDLILRKVEDKVTPKGLKKQK
SIO_010081: TOCE_RS01175
subclass of: SO_0000673
so part of: TOCE_RS01175
location: 220474..221115
location: region:220474-221115:1
so has part: feature:220474-221115:1:exon

WP_013275064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220474-221115:1:exon

TOCE_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01180
old locus tag: Toce_0227
so part of: sequence
location: 221273..221614
location: region:221273-221614:1
so has part: feature:221273-221614:1:exon
subclass of: SO_0000010

position:221273:1
position: 221273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221614:1
position: 221614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221273-221614:1:exon

TOCE_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01180
old locus tag: Toce_0227
inference: COORDINATES: protein motif:HMM:NF024983.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing protein
translation: MEQKWVQKLPVAITVCDAEGKILYMNEKACKTFEKSGGADLIGKNVLDCHPEPARSKLKNMLETQTKNCYTIEKNGVKKLIYQTPWYDENNNYEGFIEFSIEIPFEIPHYIRK
SIO_010081: TOCE_RS01180
subclass of: SO_0000673
so part of: TOCE_RS01180
location: 221273..221614
location: region:221273-221614:1
so has part: feature:221273-221614:1:exon

WP_013275065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221273-221614:1:exon

TOCE_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01185
old locus tag: Toce_0228
so part of: sequence
location: 221707..222732
location: region:221707-222732:1
so has part: feature:221707-222732:1:exon
subclass of: SO_0000010

position:221707:1
position: 221707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222732:1
position: 222732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221707-222732:1:exon

TOCE_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01185
old locus tag: Toce_0228
inference: COORDINATES: protein motif:HMM:NF016328.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain
translation: MPKVKEGFVNHDKCINCGLCEKVCPVLNNTPVNNEPKAYACINKDEKIRMDSSSGGTFTLIAEQVINSGGVVFGAGFDEDFTVVHSYAESRESLSNFHGSKYVQSKIGDMYKQAEKFLKQRRQVLFTGTPCQIAGLKSYLRKLYDNLLCVDFICFGVPSTKVWKKYISYHENNIGAPVRRVSFRNKKQGWKRFSMFLSFDNGMKHIESFDKDFFMQAFLKKICLRPSCHACNFKTLHRQSDITLADFWGVQNLLPEMDDDKGTSLVFINSHRGELIFEQIKDKLLYNMVDLNEAVRYNLSAVKSVKQHPNRENFFKELDLISFDALVKKYIQFNVSKIKEN
SIO_010081: TOCE_RS01185
subclass of: SO_0000673
so part of: TOCE_RS01185
location: 221707..222732
location: region:221707-222732:1
so has part: feature:221707-222732:1:exon

WP_013275066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221707-222732:1:exon

TOCE_RS11810
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS11810
old locus tag: Toce_0230
pseudo: true
so part of: sequence
location: complement(<223474..224827)
location: region:223474-224827:-1
so has part: feature:223474-224827:-1:exon
subclass of: SO_0000010

position:223474:-1
position: 223474
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:224827:-1
position: 224827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223474-224827:-1:exon

TOCE_RS11810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS11810
old locus tag: Toce_0230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012008915.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1182 family transposase
SIO_010081: TOCE_RS11810
subclass of: SO_0000673
so part of: TOCE_RS11810
location: complement(<223474..224827)
location: region:223474-224827:-1
so has part: feature:223474-224827:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:223474-224827:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 555079
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00379
inference: COORDINATES: profile:INFERNAL:1.1.4
note: cyclic di-AMP (ydaO/yuaA leader) riboswitch senses the signaling molecule cyclic di-AMP; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: cyclic di-AMP
so part of: sequence
location: 225246..225417
location: region:225246-225417:1
so has part: feature:225246-225417:1:region

position:225246:1
position: 225246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225417:1
position: 225417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225246-225417:1:region

TOCE_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01200
old locus tag: Toce_0231
so part of: sequence
location: 225510..226643
location: region:225510-226643:1
so has part: feature:225510-226643:1:exon
subclass of: SO_0000010

position:225510:1
position: 225510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226643:1
position: 226643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225510-226643:1:exon

TOCE_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01200
old locus tag: Toce_0231
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777487.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD/NADP-dependent octopine/nopaline dehydrogenase family protein
translation: MIKRPEEVRYTVIGAGNGGLAMAGYLGLMGFTVNLYNRSEEKIRELIKDPKIHLTGAVEGEGRLSVVTTDIREAIDGSDIIMVTTPATAHRELAEQMAPYIKDDQIIVLNPGRTCGALEVYETLRKSGCTKNVIVAEAQTFIYACRATGPSSAKIFSVKNEVKLSAIPAKKTWMVIRLLSAAYPQFKPARDVMETSLNNFGAIFHPAPTLLNSGHIERGQTFEYYLEGITPSIGQMLEKLDAERMKVARALGVKAISAMQWLEDSYGARGNSIYEAIQNNPAYKGLTAPKDLKTRYIYEDVPFSLVPISSLAKNLGIETPAIDTIIRLANMMTGVNFWEQGRTVDKLGLAGLSPAEIHEFAQNGYLEIKRTEEEVVA
SIO_010081: TOCE_RS01200
subclass of: SO_0000673
so part of: TOCE_RS01200
location: 225510..226643
location: region:225510-226643:1
so has part: feature:225510-226643:1:exon

WP_013275068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225510-226643:1:exon

TOCE_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01205
old locus tag: Toce_0232
so part of: sequence
location: 226643..228289
location: region:226643-228289:1
so has part: feature:226643-228289:1:exon
subclass of: SO_0000010

position:228289:1
position: 228289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226643-228289:1:exon

TOCE_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01205
old locus tag: Toce_0232
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777488.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cobalamin B12-binding domain-containing protein
translation: MKRILGATIGSCVHVAGVMNFLSLAEREGYEVEFLGAAVSIDELIAAVKERMPDYVGVGYRLTPEPLREVLKELKEKIKAHGLDSGIKWIFGGTEPTAKVAEESGIFTKIFNGLEDIDEVIGFLKGYRRSTEETYPEDLISRIESKYPYPILRHHLGLPSLEATIEAIEKVAEAKVLDVISIAPDQNAQEYFFEQDKMDRRLDGAGGVPVRSREDFLALYRASRRGNYPLLRCYSGTSHLIEFAELLNETIKNAWCAVPLCWYNVLDKRGPRLLRDSIRENQQVMKWHGERGIPVEVNESHHWSLRDAHDTVGVATAFLAAYNAKKMGVKHYIAQYMFNVPPSLSPRMDLAKMLAKIELIESLQDENFRVYRQARAGLASFPGDLAQAKGQLASSAYLAMAIKPHIYHVVGFCEAHHAATAEDIIESCKIVRGVIRNAFLGLPDLVNDPVVQERKKQLVDEAMITLEAIKRLNPGAEDPWTDPDTIARAVELGILDAPHLKGNPAACGKLVTRLVDGALYAYDPEENRVLTETERIEKIFKRAEITVS
SIO_010081: TOCE_RS01205
subclass of: SO_0000673
so part of: TOCE_RS01205
location: 226643..228289
location: region:226643-228289:1
so has part: feature:226643-228289:1:exon

WP_013275069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226643-228289:1:exon

TOCE_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01210
old locus tag: Toce_0233
so part of: sequence
location: complement(228332..228571)
location: region:228332-228571:-1
so has part: feature:228332-228571:-1:exon
subclass of: SO_0000010

position:228332:-1
position: 228332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228571:-1
position: 228571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228332-228571:-1:exon

TOCE_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01210
old locus tag: Toce_0233
inference: COORDINATES: protein motif:HMM:NF019246.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YkoF family thiamine/hydroxymethylpyrimidine-binding protein
translation: MISCEVSIYPMETQNSDQVINQALASIKDKGVTCQVGTISTYISGPPEKVWECIRTLYDAASARSKELSMVVTISNSQE
SIO_010081: TOCE_RS01210
subclass of: SO_0000673
so part of: TOCE_RS01210
location: complement(228332..228571)
location: region:228332-228571:-1
so has part: feature:228332-228571:-1:exon

WP_013275070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228332-228571:-1:exon

TOCE_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01215
old locus tag: Toce_0234
so part of: sequence
location: complement(228590..228778)
location: region:228590-228778:-1
so has part: feature:228590-228778:-1:exon
subclass of: SO_0000010

position:228590:-1
position: 228590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228778:-1
position: 228778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228590-228778:-1:exon

TOCE_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01215
old locus tag: Toce_0234
inference: COORDINATES: protein motif:HMM:NF019751.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: H-type small acid-soluble spore protein
translation: MDFQRAQEILNSSDTYEVFYQGKLVWIKGLNPDDNTADVEILGEKIHTKVPVNELVEGGSFY
SIO_010081: TOCE_RS01215
subclass of: SO_0000673
so part of: TOCE_RS01215
location: complement(228590..228778)
location: region:228590-228778:-1
so has part: feature:228590-228778:-1:exon

WP_013275071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228590-228778:-1:exon

TOCE_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01220
old locus tag: Toce_0235
so part of: sequence
location: 228916..229695
location: region:228916-229695:1
so has part: feature:228916-229695:1:exon
subclass of: SO_0000010

position:228916:1
position: 228916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229695:1
position: 229695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228916-229695:1:exon

TOCE_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01220
old locus tag: Toce_0235
EC number: 2.4.99.-
inference: COORDINATES: protein motif:HMM:NF000779.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prolipoprotein diacylglyceryl transferase
translation: MLIDVSPYAFKIGPIAVHWYGIFMAISFLVGSYYLYTMGRKLRLDEDFLLNLAMIVIISGVIGARLMFVLTNYPEWFLKDPVQVLKIWEGGLSWHGALLGGFLAGWPYCRRHGVNPNMIADWTVLGLSFGYIIVRIGNIFNQEVLGRMTEFSFGRWPAQLIGSFIGLILLIRFLYLQTKKLPPGYQFWSFIWYHQILRALIEETVRDNPLFLIHYVNDHWGIGFLTLTQLITPFVVAFAYYMYKSTGGYGYGGYRRNWY
SIO_010081: TOCE_RS01220
subclass of: SO_0000673
so part of: TOCE_RS01220
location: 228916..229695
location: region:228916-229695:1
so has part: feature:228916-229695:1:exon

WP_013275072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228916-229695:1:exon

TOCE_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01225
old locus tag: Toce_0236
so part of: sequence
location: 229817..231031
location: region:229817-231031:1
so has part: feature:229817-231031:1:exon
subclass of: SO_0000010

position:229817:1
position: 229817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231031:1
position: 231031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229817-231031:1:exon

TOCE_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01225
old locus tag: Toce_0236
inference: COORDINATES: protein motif:HMM:NF017495.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF819 family protein
translation: MTLIKPDDAWSLWAVLIGWAAVSILLEQKYDWAAKISGAVIALFGALILANLNIIPTESPVYDAVWSYVVPVAIPLLLFKANIRKIWTESGRMILAFWPAALGTCVGAFVATVLLKNVIPELGKIGGIMTASYIGGGVNFVAMTAVFKPQESLLNATIVSDNLVMAAFFLLYMYIPTLKYFQKNFKILYPDGGIATINTEAETKAAAYWGRKEISLKDIATAMAVGVAVAAISKKLSILLGAVMPGGNFLFDMLKIMVSNQYFLITTITVTLVTIFSDFFENINGAQELGTFLIYIFFVVIGVPASIKEIILKSPALLLFCVIMAFFNLIFSLYGNKFLNISLEESLLASNATIGGPTTAAAMAISRGWSNHIIPALLCGIWGYVTGNYFGLFMGNWLIRILGQ
SIO_010081: TOCE_RS01225
subclass of: SO_0000673
so part of: TOCE_RS01225
location: 229817..231031
location: region:229817-231031:1
so has part: feature:229817-231031:1:exon

WP_013275073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229817-231031:1:exon

TOCE_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01230
old locus tag: Toce_0237
so part of: sequence
location: complement(231089..231739)
location: region:231089-231739:-1
so has part: feature:231089-231739:-1:exon
subclass of: SO_0000010

position:231089:-1
position: 231089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231739:-1
position: 231739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231089-231739:-1:exon

TOCE_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01230
old locus tag: Toce_0237
inference: COORDINATES: protein motif:HMM:NF014628.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lactate utilization protein
translation: MGFTQELVSWSYEQKCQKAVESLKKRGFTAVYCKTGQEAVDYIIREAKEASTIGFGGSMSIADLKIADTLREMGKELLIHGAPGLSPEERLSVMRRQLTCDLFLTSTNALTMTGCLVNIDGTGNRAASMFFGPKKVIVVAGRNKLVSDTEEALKRIKMYAAPPNAKRLNYQTPCAKTGFCADCDSPDRICRITTILERKPRLTDIHVLVINEDLGF
SIO_010081: TOCE_RS01230
subclass of: SO_0000673
so part of: TOCE_RS01230
location: complement(231089..231739)
location: region:231089-231739:-1
so has part: feature:231089-231739:-1:exon

WP_013275074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231089-231739:-1:exon

TOCE_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01235
old locus tag: Toce_R0008
so part of: sequence
location: complement(231884..231961)
location: region:231884-231961:-1
so has part: feature:231884-231961:-1:exon
subclass of: SO_0000663

position:231884:-1
position: 231884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231961:-1
position: 231961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231884-231961:-1:exon

TOCE_RS01235
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 555079
locus tag: TOCE_RS01235
old locus tag: Toce_R0008
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(231926..231928),aa:Arg,seq:ccg)
SIO_010081: TOCE_RS01235
subclass of: SO_0000673
so part of: TOCE_RS01235
location: complement(231884..231961)
location: region:231884-231961:-1
so has part: feature:231884-231961:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231884-231961:-1:exon

TOCE_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01240
old locus tag: Toce_0238
so part of: sequence
location: 232144..232716
location: region:232144-232716:1
so has part: feature:232144-232716:1:exon
subclass of: SO_0000010

position:232144:1
position: 232144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232716:1
position: 232716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232144-232716:1:exon

TOCE_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01240
old locus tag: Toce_0238
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777493.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2284 domain-containing protein
translation: MDLLTKFKDAEKLLEFALGCEGVTEAKLIAVRDVVVDERVRFQCSHSGCREYGKRFMCPPHVPGVDEFRKVLSNYIMALLIQVQGSAKGEGADEEATRLALLLHDAVYRTEKRAFSLGFSFAAGLTGGPCRLCEECPVTKDSGAFCVKRDRVRPPMEAMGIDVFKTCKNAGMEMAFTPGKVIWTGMVLLD
SIO_010081: TOCE_RS01240
subclass of: SO_0000673
so part of: TOCE_RS01240
location: 232144..232716
location: region:232144-232716:1
so has part: feature:232144-232716:1:exon

WP_013275075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232144-232716:1:exon

TOCE_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01245
old locus tag: Toce_0239
so part of: sequence
location: 232741..234153
location: region:232741-234153:1
so has part: feature:232741-234153:1:exon
subclass of: SO_0000010

position:232741:1
position: 232741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234153:1
position: 234153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232741-234153:1:exon

TOCE_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01245
old locus tag: Toce_0239
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777494.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stalk domain-containing protein
translation: MLKRRFAVFFLTVTIMLTVITPFTASAAAFVRVMLNGDELKFDVAPVLKNNRLLVPFRLLSENLGAGVRWDGRTKMVTAYKSETQVVLRVGSSTAYVNGKPVKLDVPAMLIQGRTLVPLRFYSEAFGAAVDWDGRENTVFIKTADKLSKYIMGYYYSQSYDDFINNVDKLSSIATKWYTLNSDCNLTSYDGSRWIMKPEGYDSVLRTARERGVKVHALVFESDRARLQQALATAEKRNALVGQILAEVDKENYDGVNIDFEYLGPEDKENFNAFIKDLYAALKSRNKTLSLSLPAKTEKQDWWPGYDYGTLGKYSDFVVLMAYDKSPSTPGPQAGVEWVEEIVNYALARIPAEKIVLGIGYYGYAWSGNEKYTVLEARNGMTYSKIWFLDELAQKYGLKMTIDSTSLMDYGSFTDEKGNIYQIWMESPKSVDAKSKLAIKKGLKGIAVWRLGYTTPSFWQAVNDNFIAAK
SIO_010081: TOCE_RS01245
subclass of: SO_0000673
so part of: TOCE_RS01245
location: 232741..234153
location: region:232741-234153:1
so has part: feature:232741-234153:1:exon

WP_013275076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232741-234153:1:exon

TOCE_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01250
old locus tag: Toce_0240
so part of: sequence
location: 234307..235131
location: region:234307-235131:1
so has part: feature:234307-235131:1:exon
subclass of: SO_0000010

position:234307:1
position: 234307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235131:1
position: 235131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234307-235131:1:exon

TOCE_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01250
old locus tag: Toce_0240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777495.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp23/Gls24 family envelope stress response protein
translation: MKVIALVGKSGTGKSHKAHIVARHYGAELIIDDGLLIHGNRVVAGFSAKREETMIGAIRRAIFQDPDHAGEVKKKLAEINAGKVLIIGTSEKMIRAICRALELPAPEAVVRIEDVSTPEEIEKARLIRKYEGKHVIPVPTLEIKKYFSGYLLDPLKIFYRRGKQEIVTEKSVVRPTYSYLGRYTIADTVVSQIALHAALSVKGVGPGGRAIIENYGTGVAIVLELSVEYGVPLIPLLEKVQSEVAKQVEHMTALNVLRVDVTARRLYFKKENSI
SIO_010081: TOCE_RS01250
subclass of: SO_0000673
so part of: TOCE_RS01250
location: 234307..235131
location: region:234307-235131:1
so has part: feature:234307-235131:1:exon

WP_013275077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234307-235131:1:exon

TOCE_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: nuoE
locus tag: TOCE_RS01255
old locus tag: Toce_0241
so part of: sequence
location: 235209..235736
location: region:235209-235736:1
so has part: feature:235209-235736:1:exon
subclass of: SO_0000010

position:235209:1
position: 235209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235736:1
position: 235736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235209-235736:1:exon

TOCE_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: nuoE
locus tag: TOCE_RS01255
old locus tag: Toce_0241
EC number: 1.6.5.9
inference: COORDINATES: protein motif:HMM:NF005722.0
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoE
translation: MFCCAGEEHGIEKKFPDDEVDLSALEQVLKEYRGVPGSLITVLQKVQDIYGYLPRKALYHIAREIGVKPAKVFGVATFYAQFRLKPIGKHLIMVCHGTACHVNGAELITSALCDELKIKDGETTADGLFTLQNVACLGCCSLAPVMMIDGEAYGKLTPDKARDVIRDIYKRETGK
SIO_010081: TOCE_RS01255
subclass of: SO_0000673
so part of: TOCE_RS01255
location: 235209..235736
location: region:235209-235736:1
so has part: feature:235209-235736:1:exon

WP_013275078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235209-235736:1:exon

TOCE_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: nuoF
locus tag: TOCE_RS01260
old locus tag: Toce_0242
so part of: sequence
location: 235755..237506
location: region:235755-237506:1
so has part: feature:235755-237506:1:exon
subclass of: SO_0000010

position:235755:1
position: 235755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237506:1
position: 237506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235755-237506:1:exon

TOCE_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: nuoF
locus tag: TOCE_RS01260
old locus tag: Toce_0242
inference: COORDINATES: protein motif:HMM:NF010120.0
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoF
translation: MKVVVGLGSCGIAAGGNRVLEAIQEEVESRKIDVDVKKAGCIGMCYLEPIVDVIDDDGNKTTYVRVTPEIVKEIFEKHIEKGEVLSEHAIGEDDRSYIDGQVRIALRNCGAIDPESIEEYIEKGGYKALEKVLKEMTPEQVIEEMKVSGLRGRGGAGFPTWFKWNATRSAQGSPKYVVCNADEGDPGAFMDRSVLEGDPHSVLEGMAIAGYAIGAEHGYIYVRAEYPLAIKRLEIAIEQAREKGFLGSNIFGTGFSFDVKIKAGAGAFVCGEETALIASLEGERGMPRLKPPFPAQKGYMGKPTNINNVETFANVPWIILNGGKAFAAIGTEKSKGTKVFALAGKVKKGGLVEVPMGIPLRDVIFRIGGGIKNDRKIKAVQLGGPSGGCVPESLLDTPVDYESIVKTGAIMGSGGMIVMDETTCMVDMARFFLDFTRKESCGKCTHCRLGTKRMLEILERICEGRGEESDLELLEELAVNVKGGSLCGLGQTAPNPVLTTLRYFRDEYEAHIKDKKCPAKQCKALIAYRIDAEKCKSCGLCARKCPVNAIKGSKGQPYEIVLEKCTKCGTCMQVCRFGAVFVE
SIO_010081: TOCE_RS01260
subclass of: SO_0000673
so part of: TOCE_RS01260
location: 235755..237506
location: region:235755-237506:1
so has part: feature:235755-237506:1:exon

WP_013275079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235755-237506:1:exon

TOCE_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01265
old locus tag: Toce_0243
so part of: sequence
location: 237526..241146
location: region:237526-241146:1
so has part: feature:237526-241146:1:exon
subclass of: SO_0000010

position:237526:1
position: 237526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241146:1
position: 241146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237526-241146:1:exon

TOCE_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01265
old locus tag: Toce_0243
inference: COORDINATES: protein motif:HMM:NF009410.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-binding protein
translation: MEEIRLNINGREVRGLKGQTILEVARENGIDIPTLCYDERVKIYGSCGLCLVEVEGAPKLLRACATEISNGMVVYTDTKKVRASRKVALELLLSNHTGDCRPPCRQACPARTDCQGYVGLIANGQYREAVKLIKEQLPLPASIGRICPHPCEDACRRQLVEEPIAIAWLKSFVGDVDLASEYPYMPEIKPPTGKSVSVIGSGPAGLSAAYYLAKEGHRVVVYEAMEKPGGMLRYGIPQYRLPKEVLDREIDLIRKMGVEFITGCRVGRDVTLDYLRSSYDAVFVAIGAWKSAKVGCPGEDLDGVLGGIDFLRAVAKGEPVNMGRRVAVVGGGNTAMDACRTAIRLGAEEVYVLYRRTRNEMPANEVEIKEAEEEGVKFVFLVSPIEIMGRDGRVAAVRLQKMRLGEPDSTGRRKPEPIPGEEMILEVDTVIAAIGQEVNPEGLEGLNLTRKRTISADEGTFATSIPGVFAGGDAINEGPGIAIEAVADGKKAAEVIMSYLEGNTIPFREPYVVRRSDLTQADFADRERIPRVPMPHLSPEERKTNFREFVLGYSEEEAKKEAMRCLECGCKDFFECKLIKYANEYGVNPEKLAGEVSRYEYRDDHPFIVRDPNKCILCGLCVRVCDEVMGITALGFVNRGFDTVIKPEFELPLRDTSCISCGQCVAVCPTGALQEKPPVAKPVPVATEKKHTVCSFCGVGCNMKLDIRGDMILRALPDKESPVDAGHLCVKGRFGFSALKAGERLTTPLVRENGKLAETSWEEALLYAGRKVQGIRAMNGGESLAVFVSPRLTNEEIFMAVEFAKKGLGTPHVASFSNTTSGLKDVLGFDASTNSLEELTSTDMILLIGCRVMEDYAVAGLKIREALKEGAKLVVINPEPSIADEWAHKVVRPENSVDFLKALLKGLIEEGFTSGAARAEGFEELKASLADTAVSDDIREIARLYGKAGNAMVVFDHERLTRDAERLIASIAVVSGHIGRPRNGIVMLKAKGNAQGLVDMGVTADAAEILKLIEQGRIKGAFIFGEDPAGADAAVTGILKKLEFLAVQDLFLTDTARLADVVLPAAAFSESRGSYTSAERRVQWFERALPASTGRENWQVIRDLAGATGCAFNFGSAEEVLDAISRQIPEYRGVKKTALTGGGIFWPAGTKDAFGMPVLYREGFNFESGKARLAVSAGGPAFRCMGPADAVERAFARKMEETGIAR
SIO_010081: TOCE_RS01265
subclass of: SO_0000673
so part of: TOCE_RS01265
location: 237526..241146
location: region:237526-241146:1
so has part: feature:237526-241146:1:exon

WP_013275080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237526-241146:1:exon

TOCE_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01270
old locus tag: Toce_0244
so part of: sequence
location: 241374..242333
location: region:241374-242333:1
so has part: feature:241374-242333:1:exon
subclass of: SO_0000010

position:241374:1
position: 241374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242333:1
position: 242333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241374-242333:1:exon

TOCE_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01270
old locus tag: Toce_0244
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777498.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-CoA dehydratase activase-related protein
translation: MKIGIPRTLAYYAYYPFINTFFEKLGLEVAVSDPTSKEIVDAGVEDAVADACVPIKLFHGHVKNLINRVDYVFVPRLVSVNREATFCPKFLGLPDMLACSIPNLNNMLEVRIDIRGKKRELFLTCLRVAGKFKKGFFTAYNAYRKALISFKDYTNQFLQGGIPPLGIMAQKKSADIKLGVVGYPYMLYDPYVSLDLIKKLIGMGTYVVTPEMVPEEVKQKYAGKLRKTLFWTFSNSVLRTAFHFLETGCVDGIIHVTAFGCGPDFIVDKIMELEARERNMAYLTIALDEHTGQEGLNTRLEAFVDMLRRKRKVKEAAML
SIO_010081: TOCE_RS01270
subclass of: SO_0000673
so part of: TOCE_RS01270
location: 241374..242333
location: region:241374-242333:1
so has part: feature:241374-242333:1:exon

WP_013275081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241374-242333:1:exon

TOCE_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01275
old locus tag: Toce_0245
so part of: sequence
location: 242330..243466
location: region:242330-243466:1
so has part: feature:242330-243466:1:exon
subclass of: SO_0000010

position:242330:1
position: 242330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243466:1
position: 243466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242330-243466:1:exon

TOCE_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01275
old locus tag: Toce_0245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777499.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-hydroxyacyl-CoA dehydratase
translation: MRKVSYPYLGNATITFQKLMKALGNDVVLPKRPTEETLSLGTKYAPEFACLPFKIVLGTYIEALEAGADTLVSTGGVGPCRAGLYTTLHEKILKSLGYDFEMITLEPPGRHLRDLIASIKKLVSKKLSIADYFRIGRFVWKELQLLDKAEKLSHKIRPLEVKKGETTRTYKKCAELIAQAQSYRDLVEIEREIELLYEKIEKKDIDPIKIGIVGEIYVVIEPAANLEIEEMLGDLGVYAERSMFLASYTFYNAVMDLFRMPGERDVKKLASPYFKEMCGGHGRESVGNAILFAKRGFDGVIQLSPFTCIPEIVAKSILPKVCAEYGIGFLPVTLDEQTGKEGLRTRVEAFVDLLAAKRKKKKMNLGKGDVVYGTLSGY
SIO_010081: TOCE_RS01275
subclass of: SO_0000673
so part of: TOCE_RS01275
location: 242330..243466
location: region:242330-243466:1
so has part: feature:242330-243466:1:exon

WP_013275082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242330-243466:1:exon

TOCE_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01280
old locus tag: Toce_0246
so part of: sequence
location: 243444..244409
location: region:243444-244409:1
so has part: feature:243444-244409:1:exon
subclass of: SO_0000010

position:243444:1
position: 243444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244409:1
position: 244409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243444-244409:1:exon

TOCE_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01280
old locus tag: Toce_0246
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777500.1
GO function: GO:0008047 - enzyme activator activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-CoA dehydratase activase
translation: MAHYLGIDVGSVSTNLIIMDESGEVEEAVYIRTQGQPIKAVQEGLRLLNSRGHGKWDIRGVGTTGSGRQLAAVIAGADIVKNEITAHAVAAQKEVPDVRTVIEIGGQDSKIIILRDGVVTDFAMNTVCAAGTGSFLDQQANRLGIPIEEFGSYALRSKNPVRIAGRCAVFAESDMIHKQQLGYKIEDIIRGLCQALVRNYLNNVGKGKEILPRVVFQGGVAANVGMKAAFEEALGMEVYVPKYHHVMGALGAALLARDAGVEKTKFRGFQASDIEFAADSFECQGCSNHCEVVNIKMEGKVIARWGDRCNKWKVIEDSGAA
SIO_010081: TOCE_RS01280
subclass of: SO_0000673
so part of: TOCE_RS01280
location: 243444..244409
location: region:243444-244409:1
so has part: feature:243444-244409:1:exon

WP_013275083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243444-244409:1:exon

TOCE_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01285
old locus tag: Toce_0247
so part of: sequence
location: complement(244406..245053)
location: region:244406-245053:-1
so has part: feature:244406-245053:-1:exon
subclass of: SO_0000010

position:244406:-1
position: 244406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245053:-1
position: 245053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244406-245053:-1:exon

TOCE_RS01285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01285
old locus tag: Toce_0247
EC number: 3.1.3.-
inference: COORDINATES: protein motif:HMM:TIGR01489.1
GO function: GO:0016791 - phosphatase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MtnX-like HAD-IB family phosphatase
translation: MKIAFFIDFDGTITKEDTCVAMTRNFARGDWEEIELRWQRGEISTEESARETFKLFDAGEEDLRNFLIENMEIDDYFMPFVEFCRERGYEIYILSDGYDFNIETVFKKYGIKDIPYFSNMLIIDGRKFDIESPHSSWSCPQCGTCKAELIDKLKPKNGLAVYVGDGHSDICAIKKADVIFAKGVLLSHCRRNDIPAIAYKDFSDIIDWARSANIR
SIO_010081: TOCE_RS01285
subclass of: SO_0000673
so part of: TOCE_RS01285
location: complement(244406..245053)
location: region:244406-245053:-1
so has part: feature:244406-245053:-1:exon

WP_013275084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244406-245053:-1:exon

TOCE_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01290
old locus tag: Toce_0248
so part of: sequence
location: 245310..246134
location: region:245310-246134:1
so has part: feature:245310-246134:1:exon
subclass of: SO_0000010

position:245310:1
position: 245310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246134:1
position: 246134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245310-246134:1:exon

TOCE_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01290
old locus tag: Toce_0248
inference: COORDINATES: protein motif:HMM:TIGR02772.1
GO function: GO:0045027 - DNA end binding [Evidence IEA]
GO process: GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ku protein
translation: MRALWRGSISFGLVNVPVKMYAATERKSVSFRQIHRECGTPIRYEKVCPACNRKVEDDEIARGYEYEKGKFVIIEDKDLESIPDETTRTIDIIDFVNLAEIDPIYFDHSYFLGPEETGQKAYLLLLKALKETGKIAIAKVMIRAKQSLACLRPYGENRLVMETMFYPDEVRDAGEIPVSPEVKIHENEIKMAVQLINSLATDFKPEKYTDEYRKALLDIIRAKVEGQDIRIPAPREEKVVDLMEALKASLAMVEKEKESKKEAAGRGRRKRATS
SIO_010081: TOCE_RS01290
subclass of: SO_0000673
so part of: TOCE_RS01290
location: 245310..246134
location: region:245310-246134:1
so has part: feature:245310-246134:1:exon

WP_013275085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245310-246134:1:exon

TOCE_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01295
old locus tag: Toce_0249
so part of: sequence
location: complement(246129..247055)
location: region:246129-247055:-1
so has part: feature:246129-247055:-1:exon
subclass of: SO_0000010

position:246129:-1
position: 246129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247055:-1
position: 247055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246129-247055:-1:exon

TOCE_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01295
old locus tag: Toce_0249
inference: COORDINATES: protein motif:HMM:NF013252.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA ligase family protein
translation: MIKPGIPFIPMEPLPHPKPFDDEKYGFQIKWDGTRIVAHLSGGVELFNRKMKRRTAQYPEVAGTLSDVLGDSDAVLDGEMITLIGGKPSFQQLMRRDWATDPGTINYLASRIPVTYVVFDILYLNGKSLIDLPFSRRYHILKSTLRSSDPVVVTDTFPGRGIALYEIARERGLEGIVAKRLDSVYQIGKKSDKWLKIKNRREVTALVGGFLAEGKSVRSLFLGQLVEGELIYIGRASSGLGAETSRVLYDLLSKSAKESCPFANPPQIERREKPVWVSPSVAVEVEFLDYTDEGYLRHPVIRRVEFGS
SIO_010081: TOCE_RS01295
subclass of: SO_0000673
so part of: TOCE_RS01295
location: complement(246129..247055)
location: region:246129-247055:-1
so has part: feature:246129-247055:-1:exon

WP_013275086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246129-247055:-1:exon

TOCE_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: ligD
locus tag: TOCE_RS01300
old locus tag: Toce_0250
so part of: sequence
location: 247163..248056
location: region:247163-248056:1
so has part: feature:247163-248056:1:exon
subclass of: SO_0000010

position:247163:1
position: 247163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248056:1
position: 248056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247163-248056:1:exon

TOCE_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: ligD
locus tag: TOCE_RS01300
old locus tag: Toce_0250
EC number: 6.5.1.1
inference: COORDINATES: protein motif:HMM:TIGR02778.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: non-homologous end-joining DNA ligase
translation: MPVVIVEDEKLELTNLSKVMWPEDNITKADFIDYYVRVAPYVLPHLKDRPMVFTRYPDGIYGKAFYQKNIPDYAPEWLRTYDEESFTGGKRKVVRYALIDDMKSLLWAANQASLEMHPWLSRVGTIEYPDFVVFDLDPMENTDFEDARQLALALKKLLDMEGLVGFPKTSGATGIQVYVPIEPRYTYREVRVFAKIFCRVLERTFPEKATTERSIKKRRGKVYLDYLQNIKGKTLIAPYSPRPIAGAPVSAPVTWDELEEGVRPSMFTIRNMPERLQKVGDLFKGVLEVKQRIDRWL
SIO_010081: TOCE_RS01300
subclass of: SO_0000673
so part of: TOCE_RS01300
location: 247163..248056
location: region:247163-248056:1
so has part: feature:247163-248056:1:exon

WP_013275087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247163-248056:1:exon

TOCE_RS12730
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12730
so part of: sequence
location: 248068..248190
location: region:248068-248190:1
so has part: feature:248068-248190:1:exon
subclass of: SO_0000010

position:248068:1
position: 248068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248190:1
position: 248190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248068-248190:1:exon

TOCE_RS12730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12730
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNITLGWFVDFCIFLIAASLTMGFFSLVRGILRFIQRRLG
SIO_010081: TOCE_RS12730
subclass of: SO_0000673
so part of: TOCE_RS12730
location: 248068..248190
location: region:248068-248190:1
so has part: feature:248068-248190:1:exon

WP_281054640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248068-248190:1:exon

TOCE_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01305
old locus tag: Toce_0251
so part of: sequence
location: 248193..249260
location: region:248193-249260:1
so has part: feature:248193-249260:1:exon
subclass of: SO_0000010

position:248193:1
position: 248193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249260:1
position: 249260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248193-249260:1:exon

TOCE_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01305
old locus tag: Toce_0251
EC number: 1.-.-.-
inference: COORDINATES: protein motif:HMM:NF019604.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MARVLVIGGGPGGLTAAASAASMGHEVRLLEKGRIGENIRCAEGFFDVLKKLGKPGAGVRFKVEKLIAKALATYEIDVSDLNLWMIDRREWQEDLARIARDKGAVIEENSPVSPKDLEGLMRDYDYIIDASGAPPVTARAYGFADFYKQNCARTVQYVMEGDFSYLGNNLKVGLLPGLYGYYWIFPKDGHTANVGVGSFGGEPLPLWNRLRDVLEMEGLAGYAIKRKLGGICPIRMAPRLVYDNILLVGDAAGLTSPLHGGGIDMAVLSGMEAVRSLSSGGTDYEKNLRKLLSPRLTIEAMAAGVWKKKGFEEMDELIGKLVKTGLYRPFLNPNQFNSFTAGLIAKILRVENPAV
SIO_010081: TOCE_RS01305
subclass of: SO_0000673
so part of: TOCE_RS01305
location: 248193..249260
location: region:248193-249260:1
so has part: feature:248193-249260:1:exon

WP_013275088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248193-249260:1:exon

TOCE_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01310
old locus tag: Toce_0252
so part of: sequence
location: 249347..249781
location: region:249347-249781:1
so has part: feature:249347-249781:1:exon
subclass of: SO_0000010

position:249347:1
position: 249347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249781:1
position: 249781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249347-249781:1:exon

TOCE_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01310
old locus tag: Toce_0252
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015294884.1
GO function: GO:0051219 - phosphoprotein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FHA domain-containing protein
translation: MYELLAQILKFLLIGLIYYFLYNFLKLMVLDLSEEKNTSVDTGYYLRSDDGREYPLRPVTTIGRAGDSDIVINDPYLSSKHAMIFKKGRRMVIQDLKSTNGTFLNGKRIKKAVALKEKDVITMGSRKFTFLRREARGLESGSDV
SIO_010081: TOCE_RS01310
subclass of: SO_0000673
so part of: TOCE_RS01310
location: 249347..249781
location: region:249347-249781:1
so has part: feature:249347-249781:1:exon

WP_013275089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249347-249781:1:exon

TOCE_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01315
old locus tag: Toce_0253
so part of: sequence
location: 249753..250985
location: region:249753-250985:1
so has part: feature:249753-250985:1:exon
subclass of: SO_0000010

position:249753:1
position: 249753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250985:1
position: 250985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249753-250985:1:exon

TOCE_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01315
old locus tag: Toce_0253
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777507.1
GO process: GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FtsW/RodA/SpoVE family cell cycle protein
translation: MDSKVEATYNRALSAMALTGLISFLLLTIFRKPVTLVPFYGAVIFLSIVFIGYFFTGWIFPSSDKFLFILAGFLTELGLIMLCRINMELFKRQVAFFALGVGFFILSSILTRYFISLELKPVYFWGATVALLLLPLLFGVEKGGAKNWLAFSGFTFQPSELAKITFVFYLAGVLKQNKINNFPRLAAEILAAVGLLAISKDLGGAMLFYITALAVIFTATSRLDLTAAGLSAAGILGVLSYFLFDHVRVRIEAWLNPWQDVPGRGYQIVQSLFAIAEGGYFGTGLGLGRPDFIPAVATDFIFSAFAEEFGFLGAAAVILMYFLMVYRGIKIALRLEDSYPALIALGYTVMFGMQIFTIIGGVIKLIPVTGVTLPFMSYGGSSMVMSFTSLGILNGLWLQAREGETDGEAA
SIO_010081: TOCE_RS01315
subclass of: SO_0000673
so part of: TOCE_RS01315
location: 249753..250985
location: region:249753-250985:1
so has part: feature:249753-250985:1:exon

WP_013275090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249753-250985:1:exon

TOCE_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01320
old locus tag: Toce_0254
so part of: sequence
location: 250969..252378
location: region:250969-252378:1
so has part: feature:250969-252378:1:exon
subclass of: SO_0000010

position:250969:1
position: 250969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252378:1
position: 252378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250969-252378:1:exon

TOCE_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01320
old locus tag: Toce_0254
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777508.1
GO function: GO:0008658 - penicillin binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-binding transpeptidase domain-containing protein
translation: MEKLHRNIKLVFAVFCGLFMCLLGYLTYFQVYERQKLIESSYNRRLWEQEESITRGTVYDIRGRVLAATVVENGAKRRVYPQGPAFGPLLGYSSRKLGRAGLEEVLNGELLGISQQDPMLLLRQKILGVSKGNDVYLTIDSDLQKRAYELFQGRRGALVALDPNTGAVLAMVSSPGYNPSSVEKQWEALSKDKASPLLNRAIQGLYPPGSSFKIVTLAAALESIPDIEKRTYETPGYVKVSGRVIRDYEGMEPGNYDVKRAFSLSSNSIFVKIGLEVGKERLFAKAQEFGFNSKIPFELPAAVSRFPRFSLMSDDVELAEASIGQGRILATPLQMAMVASTVANGGKMIQPYIVQKTVTPLGHVKNFEKAGSAKQVIDEVTANKIREYMVDVVENGTGTPARVRGIPVAGKTGSAENPHGETHAWFVGFAPADDPKIAVAVVVENAGSGGRNAGPIAREVISQYLERLQ
SIO_010081: TOCE_RS01320
subclass of: SO_0000673
so part of: TOCE_RS01320
location: 250969..252378
location: region:250969-252378:1
so has part: feature:250969-252378:1:exon

WP_013275091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250969-252378:1:exon

TOCE_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01325
old locus tag: Toce_0255
so part of: sequence
location: 252419..253300
location: region:252419-253300:1
so has part: feature:252419-253300:1:exon
subclass of: SO_0000010

position:252419:1
position: 252419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253300:1
position: 253300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252419-253300:1:exon

TOCE_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01325
old locus tag: Toce_0255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777509.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MRIKKSLLADGALLLVTMAWGLNFVVMKNALQRITPFMYLAVRFLLAFLVLAAVFNENIKKVDKRDIIGGSIIGLFLFLGFATQTVGLIYTTPAKSGFITGSNVVMVPFLAYFVNKKFPGWYQVLGAAVTFAGLGVISLEGGLRVNVGDFLTLLCAVFFAMQIVSTEYYARRGNPINLAILETGITGMLSLFVGALTEPMPVTLDLSMWIAILYAVICCTAGAFLVQNVAQKYTTSTHAAVIMCQEAVFAGVFSFLFWGEPVTFKALAGFALILAGVLITELSPAYGLKTETL
SIO_010081: TOCE_RS01325
subclass of: SO_0000673
so part of: TOCE_RS01325
location: 252419..253300
location: region:252419-253300:1
so has part: feature:252419-253300:1:exon

WP_013275092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252419-253300:1:exon

TOCE_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01330
old locus tag: Toce_0256
so part of: sequence
location: 253372..254343
location: region:253372-254343:1
so has part: feature:253372-254343:1:exon
subclass of: SO_0000010

position:253372:1
position: 253372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254343:1
position: 254343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253372-254343:1:exon

TOCE_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01330
old locus tag: Toce_0256
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MLKVCNIKKTYKKPPVTALAGVSLEVMEGEVVGLLGPNGSGKTTLIKIINGIILQDSGEIYIGGRPVKNSREFANFLGSVFDTERSLSWGLTVRQNLMYFAHLKGAASGEVKAKFEYLGEIFDLKELWDRRVATLSHGQRQRAAIATALAHDPKILILDEPTNGLDVENTIHLSGIIRSLLEKKLSILISSHNLGFIEEVADRVYLMKQGRVVGNVRLEEPEKQEEMRYYHIYLSYDATHEDARKLELAGFRVIDISGAMLKVEVPQSVPASRILEVMSEIGLIVRSVLPVKRNLMELYRRVVLQNLPPGEVDVNESASRCDG
SIO_010081: TOCE_RS01330
subclass of: SO_0000673
so part of: TOCE_RS01330
location: 253372..254343
location: region:253372-254343:1
so has part: feature:253372-254343:1:exon

WP_013275093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253372-254343:1:exon

TOCE_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01335
so part of: sequence
location: 254315..254779
location: region:254315-254779:1
so has part: feature:254315-254779:1:exon
subclass of: SO_0000010

position:254315:1
position: 254315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254779:1
position: 254779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254315-254779:1:exon

TOCE_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01335
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKALRAATAEMIREIQESWYYKANFLSELMIDIIIFGMIIFLGGYSDMGAAYGVTRTETRPLVLLGYLFWYYSASALSVMGNDISIEAARGILEHKFTSVAPPALLLAGKAIGHVVTTTAFILVICGVFFLLFRVSIDVTAGALAALSLTLVGM
SIO_010081: TOCE_RS01335
subclass of: SO_0000673
so part of: TOCE_RS01335
location: 254315..254779
location: region:254315-254779:1
so has part: feature:254315-254779:1:exon

WP_041423817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254315-254779:1:exon

TOCE_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01340
so part of: sequence
location: 254837..255106
location: region:254837-255106:1
so has part: feature:254837-255106:1:exon
subclass of: SO_0000010

position:254837:1
position: 254837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255106:1
position: 255106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254837-255106:1:exon

TOCE_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01340
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MILFQTLIFFISGMLYPPDMLPEIFGWISRSLPVTQGMHIARLSMMGLPVPSELWLMLAFTSLICLAVGLLVFSHFARLVRKNGLLGSH
SIO_010081: TOCE_RS01340
subclass of: SO_0000673
so part of: TOCE_RS01340
location: 254837..255106
location: region:254837-255106:1
so has part: feature:254837-255106:1:exon

WP_041423818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254837-255106:1:exon

TOCE_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: namA
locus tag: TOCE_RS01345
old locus tag: Toce_0258
so part of: sequence
location: 255133..256155
location: region:255133-256155:1
so has part: feature:255133-256155:1:exon
subclass of: SO_0000010

position:255133:1
position: 255133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256155:1
position: 256155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255133-256155:1:exon

TOCE_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: namA
locus tag: TOCE_RS01345
old locus tag: Toce_0258
EC number: 1.6.99.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005585944.1
GO function: GO:0010181 - FMN binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0003959 - NADPH dehydrogenase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADPH dehydrogenase NamA
translation: MSKLFSKIKIKDMEVRNRIVMPPMCMYSSDDKGFPNSWHLIHYATRAIGGVGLVIMEATAVEKRGRISERDLGIWDDAHIEGLAEIASEVKKHGAKIGIQLAHAGRKCGAPGEDLIAPSPIAFDETYGVPREMTKEDIKEVVSAFKAAAYRAYRAGFDIIEIHGAHGYLISEFLSPLTNKRTDEYGGNLQNRARFLREVIRAVREVWPEEKPLMVRVSAEDYAEGGNHDIDLANIINLVKGEGVDIIDVSSGAVVPATIKAYPGYQVRFAETIRKMTGLPVIAGGLITVPEMAEEILQNERADMVYLGRELLRNPYWPLSAAKELGDDIKWPEQYERSRK
SIO_010081: TOCE_RS01345
subclass of: SO_0000673
so part of: TOCE_RS01345
location: 255133..256155
location: region:255133-256155:1
so has part: feature:255133-256155:1:exon

WP_013275094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255133-256155:1:exon

TOCE_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01350
old locus tag: Toce_0259
so part of: sequence
location: 256152..256808
location: region:256152-256808:1
so has part: feature:256152-256808:1:exon
subclass of: SO_0000010

position:256152:1
position: 256152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256808:1
position: 256808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256152-256808:1:exon

TOCE_RS01350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01350
old locus tag: Toce_0259
inference: COORDINATES: protein motif:HMM:NF012933.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-3-methyladenine glycosylase
translation: MISRKKILRFQKDDPALKALSKADEKMAYLIHLIGDYSLELEEDYFQSLVQSIVGQQLSMKAADSIWRKLQDLCGEVTPARILSLSEDELRSAGLSKKKIEYIKDLSEKVLSGILDLDKIDSMADEEVIEALVRVKGIGRWTAEMFLIFSLGRPDVFSVADLGLQRAVKWLYGLSDWPDKKFLIECSQRWKPYRTAASLYLWEAKNRGIVDEKDVAGE
SIO_010081: TOCE_RS01350
subclass of: SO_0000673
so part of: TOCE_RS01350
location: 256152..256808
location: region:256152-256808:1
so has part: feature:256152-256808:1:exon

WP_013275095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256152-256808:1:exon

TOCE_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: trpS
locus tag: TOCE_RS01355
old locus tag: Toce_0260
so part of: sequence
location: 256901..257929
location: region:256901-257929:1
so has part: feature:256901-257929:1:exon
subclass of: SO_0000010

position:256901:1
position: 256901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257929:1
position: 257929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256901-257929:1:exon

TOCE_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: trpS
locus tag: TOCE_RS01355
old locus tag: Toce_0260
EC number: 6.1.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016290865.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO process: GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan--tRNA ligase
translation: MSGKKRIFSGAQPSGSVTLGNFLGAIKNWVELQDKYDCIYCIVDLHALTVRQDPKVFRERCYSFLAQYLACGLDPEKNVVYFQSHVSAHAELAWILNCYTYMGELSRMTQFKEKARKHQDNINAGLFTYPVLMAADILLFQTDLVPVGEDQKQHVELTRDIATRFNNLYGEVFKIPEPYIPEVGARIMSLLEPTKKMSKSDENENSYILLLDPPDVIMKKFKRAVTDSEAVVRYDVERKPGISNLMNIYAAVTGRSFEEIEREFEGKGYGEFKKAVAEVVIDKLRPIREKYDELMANKDYMESVIKNGAERAQELARETLKKVYDKIGLVPCPNTGLKGPGL
SIO_010081: TOCE_RS01355
subclass of: SO_0000673
so part of: TOCE_RS01355
location: 256901..257929
location: region:256901-257929:1
so has part: feature:256901-257929:1:exon

WP_013275096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256901-257929:1:exon

TOCE_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01360
old locus tag: Toce_0261
so part of: sequence
location: 257977..258471
location: region:257977-258471:1
so has part: feature:257977-258471:1:exon
subclass of: SO_0000010

position:257977:1
position: 257977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258471:1
position: 258471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257977-258471:1:exon

TOCE_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01360
old locus tag: Toce_0261
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777384.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ECF transporter S component
translation: MKYDTKFLTRTALLLAVTLMLQYLKMPQLITGSLVNAMLLIAAGTVGVFSGITIGLLTPLIALLVGILKFPPMVPFIMAGNALYVWLYSSQKNAVIGVLLAAVAKYAWLSISVIYILKWFGVRVPPPVVQAFTLPQLFTALLGGAIGVTLIFLLQRSFAKAKEM
SIO_010081: TOCE_RS01360
subclass of: SO_0000673
so part of: TOCE_RS01360
location: 257977..258471
location: region:257977-258471:1
so has part: feature:257977-258471:1:exon

WP_013275097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257977-258471:1:exon

TOCE_RS12360
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12360
so part of: sequence
location: 258836..259066
location: region:258836-259066:1
so has part: feature:258836-259066:1:exon
subclass of: SO_0000010

position:258836:1
position: 258836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259066:1
position: 259066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258836-259066:1:exon

TOCE_RS12360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12360
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MELFVWKDKVANSLPYGLQRRLEIARALALKPKLLLLDEPAAGMNPDETLQLMNLIRRIRDEFGCTILVIEHHTWT
SIO_010081: TOCE_RS12360
subclass of: SO_0000673
so part of: TOCE_RS12360
location: 258836..259066
location: region:258836-259066:1
so has part: feature:258836-259066:1:exon

WP_223156828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258836-259066:1:exon

TOCE_RS12365
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12365
so part of: sequence
location: 259057..259200
location: region:259057-259200:1
so has part: feature:259057-259200:1:exon
subclass of: SO_0000010

position:259057:1
position: 259057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259200:1
position: 259200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259057-259200:1:exon

TOCE_RS12365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12365
inference: COORDINATES: protein motif:HMM:NF023816.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDLIMGICNNIIVLNSGKKLPEGPAEKIQQDPLVIRAYLSEGGMPGA
SIO_010081: TOCE_RS12365
subclass of: SO_0000673
so part of: TOCE_RS12365
location: 259057..259200
location: region:259057-259200:1
so has part: feature:259057-259200:1:exon

WP_223156829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259057-259200:1:exon

TOCE_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01370
old locus tag: Toce_0263
pseudo: true
so part of: sequence
location: 259232..259912
location: region:259232-259912:1
so has part: feature:259232-259912:1:exon
subclass of: SO_0000010

position:259232:1
position: 259232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259912:1
position: 259912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259232-259912:1:exon

TOCE_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01370
old locus tag: Toce_0263
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
SIO_010081: TOCE_RS01370
subclass of: SO_0000673
so part of: TOCE_RS01370
location: 259232..259912
location: region:259232-259912:1
so has part: feature:259232-259912:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259232-259912:1:exon

TOCE_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01375
old locus tag: Toce_0264
so part of: sequence
location: 260053..262011
location: region:260053-262011:1
so has part: feature:260053-262011:1:exon
subclass of: SO_0000010

position:260053:1
position: 260053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262011:1
position: 262011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260053-262011:1:exon

TOCE_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01375
old locus tag: Toce_0264
inference: COORDINATES: protein motif:HMM:NF012579.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BglG family transcription antiterminator
translation: MEYYLYTRQKTLLRFLLTRKDWVKGQEIAAALGVTDRTVRNDIAYINSLTKDNEEIITSMKSKGYRIKNCEKAREILKLARVDSPDNPDERVNYILKKLIFDKKELDIYQLADEIMVSESTIVGDLKRINKIVSANNRDLKVIKKSSKIFLKGSEKDKRSLLSELLFKETNGSFFDVSKYKKYFKDVDLDLIQKHLLETVKKYSFSINEMAVVNLLIHIAITVDRIKNKNLLDIYTSCRNMVNTMEYKIAKELCTKLEDEFQIKFPPEEVLYVSYLILGREKIQCTCTNRDELKDIVEPYYISLTVALLNSIATEYGIDFTRDDTLLIGLCLHLKIMYCRIKNGMVLRNPLLEDLKRRYPFIFEIAVFLAREFYRLTGLQVNEDEIGFIALHLGAAFERYTEKQNFPKRVAIVCPTGYTTSNILLSKINSIYKEKIKVLGVFSFMELDSIKKDNPDFIFTTVPLEHDLPINTIVISPFLDEKDKKLIDKTLNLYYAESKAESLRSEADKFFKEELFYKNLVFQNEFQVIDFMAKELHEKGYVPQNYPQLVIEREKLSSTSFGNLVAIPHPVLISAYETVISVAILDKPIMWGKHKVQLVLMFAIKPGDRKKLDFLYNHIIDAIDRPGGVNSLIESRDFYDFKSRLLNLNYEN
SIO_010081: TOCE_RS01375
subclass of: SO_0000673
so part of: TOCE_RS01375
location: 260053..262011
location: region:260053-262011:1
so has part: feature:260053-262011:1:exon

WP_013275098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260053-262011:1:exon

TOCE_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01380
old locus tag: Toce_0265
so part of: sequence
location: 262145..262453
location: region:262145-262453:1
so has part: feature:262145-262453:1:exon
subclass of: SO_0000010

position:262145:1
position: 262145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262453:1
position: 262453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262145-262453:1:exon

TOCE_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01380
old locus tag: Toce_0265
inference: COORDINATES: protein motif:HMM:NF014326.2
GO function: GO:0016740 - transferase activity [Evidence IEA]
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS lactose/cellobiose transporter subunit IIA
translation: MESIEEIAFRIISAAGDSLSMMFEAMKLSRNGKFEEAEQLMQKADDFLLQAHKVQTELIAEESRGNKSEYSILMVHAQDHIMNAMLAKPLIREIINLYKRLG
SIO_010081: TOCE_RS01380
subclass of: SO_0000673
so part of: TOCE_RS01380
location: 262145..262453
location: region:262145-262453:1
so has part: feature:262145-262453:1:exon

WP_013275099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262145-262453:1:exon

TOCE_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01385
old locus tag: Toce_0266
so part of: sequence
location: 262494..263441
location: region:262494-263441:1
so has part: feature:262494-263441:1:exon
subclass of: SO_0000010

position:262494:1
position: 262494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263441:1
position: 263441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262494-263441:1:exon

TOCE_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01385
old locus tag: Toce_0266
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013779286.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase
translation: MKWAIIGTWRMSLEGIIAATEILKHGGDSGDAVEEAVKIVEDFPLYKSVGYGGLPNENCEVELDAAFMDGDTLSFGAVGGIRDFKNPVSIARKLSHEKFNIFLVGSGAEEYAHKNGFERKNMLTDRAKKIWEKRVKEIYEKNLSPYDGHDTVGVVCLDKKGHMTAATSTSGLFMKKRGRVGDSPICGSGLYVDSQVGGAVATGLGEDIMKGCLSYEAVRLMESGIDPQTAAEKAVFNFSEKLRQRSGKAGAISLVCINNKGEWGVGTNVEFSFVVATDDSMPKVYLAHPENGRVICEEASEEWLQEYQRKITSPV
SIO_010081: TOCE_RS01385
subclass of: SO_0000673
so part of: TOCE_RS01385
location: 262494..263441
location: region:262494-263441:1
so has part: feature:262494-263441:1:exon

WP_013275100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262494-263441:1:exon

TOCE_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01390
old locus tag: Toce_0267
so part of: sequence
location: 263554..264888
location: region:263554-264888:1
so has part: feature:263554-264888:1:exon
subclass of: SO_0000010

position:263554:1
position: 263554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264888:1
position: 264888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263554-264888:1:exon

TOCE_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01390
old locus tag: Toce_0267
inference: COORDINATES: protein motif:HMM:TIGR00410.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS sugar transporter subunit IIC
translation: MKKIQDFLENKFAPFATKLAGQRHLAAIRDGFISFMPFLIIGSLFIIIQDFPAPGWQELQVKLFGEEFNQFIILPKRVTYDIMSLYIVASISYKLAQSYRIDSFSAAMLGIASFILLTPITTTIDINGTTHTVSRVITVGGWYGTNGILVAIITALVVTEMFNYFIKKGIIIKMPEGVPPAVSRAFSALVPGFVIIVTMLLVRLLFLQTPYQYIHDFIYKLVSLPMQSMVANNLLGAIGTVFSISLLWSIGLNGGTIVNGIMRPFWVPLQDANLAAIEAGKLPPNIITEQFFDMIWIGGAGATLAVVFLLMFRAKSKQYRELGKMSLAPGLFNINEPIMFGLPVVLNPIGIIPLILGPVAITIVNYEAMALNLVARPTGVIIPWTTPPIIQGFLITGHISGAILQIVDILIVMLIWWPFIAIMDKKRVAEENEKVYNKGESLKL
SIO_010081: TOCE_RS01390
subclass of: SO_0000673
so part of: TOCE_RS01390
location: 263554..264888
location: region:263554-264888:1
so has part: feature:263554-264888:1:exon

WP_013275101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263554-264888:1:exon

TOCE_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01395
old locus tag: Toce_0268
so part of: sequence
location: 264906..265598
location: region:264906-265598:1
so has part: feature:264906-265598:1:exon
subclass of: SO_0000010

position:264906:1
position: 264906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265598:1
position: 265598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264906-265598:1:exon

TOCE_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01395
old locus tag: Toce_0268
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777590.1
GO function: GO:0005507 - copper ion binding [Evidence IEA]
GO process: GO:0055070 - copper ion homeostasis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper homeostasis protein CutC
translation: MIEVIAMTPEDAKRIEACGADRIELVSALTEGGLTPSYAMIDKVVKSVRIPVNVMIRPHSKSFIYTREEIEIMKEDIRIAKELGANGVVIGALNEKKEIHEGFIEELLNLCDGLDVTFHRAIDELEDPINGIRILSRYTHIKTVLTSGGKGSIVENIPKIREMIKNSGHISVMVGGGLNFENIGRVVKETGVKVFHFGTAVRDNRSPFGEINEHSLKDIIKIVREEGDNL
SIO_010081: TOCE_RS01395
subclass of: SO_0000673
so part of: TOCE_RS01395
location: 264906..265598
location: region:264906-265598:1
so has part: feature:264906-265598:1:exon

WP_013275102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264906-265598:1:exon

TOCE_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01400
old locus tag: Toce_0269
so part of: sequence
location: 265595..265903
location: region:265595-265903:1
so has part: feature:265595-265903:1:exon
subclass of: SO_0000010

position:265595:1
position: 265595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265903:1
position: 265903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265595-265903:1:exon

TOCE_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01400
old locus tag: Toce_0269
EC number: 2.7.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019885738.1
GO function: GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS sugar transporter subunit IIB
translation: MKIVLICFAGMSTSMLVNRMKKAAAKRNIDADIVALSTSDMYEELDNADVILLGPQARYVLDEVREIATPKGIPVEVINSQIYGSMNGEAVLDMALELAKRE
SIO_010081: TOCE_RS01400
subclass of: SO_0000673
so part of: TOCE_RS01400
location: 265595..265903
location: region:265595-265903:1
so has part: feature:265595-265903:1:exon

WP_013275103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265595-265903:1:exon

TOCE_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01405
old locus tag: Toce_0270
so part of: sequence
location: 266119..266811
location: region:266119-266811:1
so has part: feature:266119-266811:1:exon
subclass of: SO_0000010

position:266119:1
position: 266119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266811:1
position: 266811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266119-266811:1:exon

TOCE_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01405
old locus tag: Toce_0270
inference: COORDINATES: protein motif:HMM:NF001911.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-dependent hydrolase
translation: MVSLTFHGHACFTISSSKFNLIIDPWLKDNPLSDIKPEQVKVDYILVTHGHGDHLGDAIEIAKASNATIIAPYELATYCQSKGAKVHPMHIGGDYTFDFGWLQLTPAMHGSGELIGDQIVYMGNPCGFLLEIEGKTLYHAGDTGLFGDMRLIGEKVSLDVAMLPIGGNFVMGIDDAVRAVEFLKPKTVIPMHYNTFDIIKKDPQEFKKKVEGKTGARVVILAPGETITVN
SIO_010081: TOCE_RS01405
subclass of: SO_0000673
so part of: TOCE_RS01405
location: 266119..266811
location: region:266119-266811:1
so has part: feature:266119-266811:1:exon

WP_013275104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266119-266811:1:exon

TOCE_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01410
old locus tag: Toce_0271
so part of: sequence
location: complement(266818..268080)
location: region:266818-268080:-1
so has part: feature:266818-268080:-1:exon
subclass of: SO_0000010

position:266818:-1
position: 266818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268080:-1
position: 268080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266818-268080:-1:exon

TOCE_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01410
old locus tag: Toce_0271
inference: COORDINATES: protein motif:HMM:NF024241.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MEKRTMSEKEFYNNFNALSYDAIFFAVFNSFVEPGTVVASFVSNLTSSPVLIGLTTTIRNCGWFLPQLLVARRAEALPRKKPLVVVAGGLLRLAAGMMALSTLIAAKNPALALTLFYVFFIVMAFSDGVGGVPWIDLFAKSIPPERRGTYYTKTLFLEGSLAFGAGFLVKAILSSDRFSFPYDYSVIFLLGFICCTISYLSFLRLKEVEDGAPRQCESLVKYLMGIPQVFKKDRDFRLLIVVNTLLRFFFMPLPFYVIFAQEALKVSQDSVGIFVSAQMLGYILAGVFFGRINDFYGSRSVVMLTAKLTAMPPVLALLSLLLYRLNLPSLPLYVLLFILIGATYSGIWVGIYNYLLKIAPEEKRPLYIGLLNTLTAPTTFLPLLGGVIIQFLSYVHLFVITAVLVFSSVVAAYALRELDA
SIO_010081: TOCE_RS01410
subclass of: SO_0000673
so part of: TOCE_RS01410
location: complement(266818..268080)
location: region:266818-268080:-1
so has part: feature:266818-268080:-1:exon

WP_013275105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266818-268080:-1:exon

TOCE_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01415
old locus tag: Toce_0272
so part of: sequence
location: 268243..269475
location: region:268243-269475:1
so has part: feature:268243-269475:1:exon
subclass of: SO_0000010

position:268243:1
position: 268243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269475:1
position: 269475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268243-269475:1:exon

TOCE_RS01415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01415
old locus tag: Toce_0272
inference: COORDINATES: protein motif:HMM:NF015418.2
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin molybdotransferase MoeA
translation: MRLFDARTVRDALEALKENLGNIPVKSEEVLLLEALNRVLAEDVYSPEDIPAFDRSTVDGYAVMARDTFGAGESMPALLKLVGEIRMGERPDITLKPGQAVKISTGGMLPEGSDAVVMLEYTQQFDDGTLVVERPVAPGENVIFRGEDVKEGSLVLPKGHTLRPQDLAVLAGIGRQKVRVAALPVVAVISTGDEVRPPGEKIKPGEIRDMNTYSLSAQVRKWGGIPRTYGVVGDDFDGLCRVMVEALASSDLVVLSGGSSVGSRDLTVKVIESLGEPGVVVHGLAVKPGKPTILGAVMGKPVVGLPGHPVSAMVIFELVVRPLISAMLGRPANYGKINVRARVARNVASAAGREDFIRVKLEERDGELWAKPILGKSGLISTMVESDGLARIPPEKLGVGEGEYIEVELY
SIO_010081: TOCE_RS01415
subclass of: SO_0000673
so part of: TOCE_RS01415
location: 268243..269475
location: region:268243-269475:1
so has part: feature:268243-269475:1:exon

WP_013275106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268243-269475:1:exon

TOCE_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01420
old locus tag: Toce_0273
so part of: sequence
location: 269490..271415
location: region:269490-271415:1
so has part: feature:269490-271415:1:exon
subclass of: SO_0000010

position:269490:1
position: 269490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271415:1
position: 271415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269490-271415:1:exon

TOCE_RS01420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01420
old locus tag: Toce_0273
inference: COORDINATES: protein motif:HMM:NF011068.0
GO process: GO:0032324 - molybdopterin cofactor biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin biosynthesis protein
translation: MKEREVYLENVSLAEAVDRFFVDLEESGALRLTGAEVVSVRQALGRITAEPVFARISSPHYSAAAMDGIAVSAKDTFGAGEKNPVRLKEGVNFHYVDTGDPLPPGCDAVIMIEEVHPLGDGEVEIVAPCSPWDNVRGIGEDIAAAELVVPENHRLRPQDLSAILAAGHTAVRVRKKPRVAVIPTGTELVNPGEPLKPGDIIESNSAMISGLVEEWGGEALVLEKAEDDFELIKRRIEEGLSAADVVVINAGSSAGSEDYTAKCIRAMGELLVHGVAIKPGKPVVLGRIAGKPVIGIPGYPVSAYLAMELFVKPIVYRMQGLPVPGRHKIRARLSRRVVSSIGTLEFLRVKVGRMGSEFIASPLSRGAGVIMSVVRADGIVRIPESREGIESGESVEVELLRDREEIENTVLMIGSHDVTIDLLANELKRLYPEITLSSAHVGSMGGIMALMRGETHMAGLHLLDPETGEYNLPYIRKYLAGRKVVLVNLAYRQQGLMVAKGNPKGIRGIEDLVREDVTFVNRQKGAGTRILLDLKLKELDIDPGRIRGYGKEEYTHLAVAAAVAGGMADAGLGILAAARAMDLDFVPVAPERFDIAIPHEFYPMDSIQKVLKILRSEEFKRKIESLGGYDTSRTGELIGGD
SIO_010081: TOCE_RS01420
subclass of: SO_0000673
so part of: TOCE_RS01420
location: 269490..271415
location: region:269490-271415:1
so has part: feature:269490-271415:1:exon

WP_013275107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269490-271415:1:exon

TOCE_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: moaA
locus tag: TOCE_RS01425
old locus tag: Toce_0274
so part of: sequence
location: 271416..272390
location: region:271416-272390:1
so has part: feature:271416-272390:1:exon
subclass of: SO_0000010

position:271416:1
position: 271416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272390:1
position: 272390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271416-272390:1:exon

TOCE_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: moaA
locus tag: TOCE_RS01425
old locus tag: Toce_0274
EC number: 4.1.99.22
inference: COORDINATES: protein motif:HMM:TIGR02666.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTP 3',8-cyclase MoaA
translation: MKDRFGREIDYIRVSVTDRCNFRCIYCMPEGGVMPKTCADILRFEEIARFLEAIVPLGISTVRITGGEPLVRKGIADFVRMVRRIPGVKDIAMTTNGSLLAGMAADLKSAGLNRVNISLDSLRPERFGRVTRGGDLKSVLKGIDAALENGLEPVKINCVVIKGFNDDEIMDFAKLTIERNLTVRFIELMPVGESKKARMNFVPAGRISRSLGGELEPVEYPEEGKGPAVYYRLPGAKGFIGFIAPMTRHFCAECNRVRLTSDGKLKVCLDSEEEFDVKAALRGGASGEDLRRIFTGALMRKPDGHRMNAVRFGKPGRTMCQIGG
SIO_010081: TOCE_RS01425
subclass of: SO_0000673
so part of: TOCE_RS01425
location: 271416..272390
location: region:271416-272390:1
so has part: feature:271416-272390:1:exon

WP_013275108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271416-272390:1:exon

TOCE_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: moaC
locus tag: TOCE_RS01430
old locus tag: Toce_0275
so part of: sequence
location: 272393..272887
location: region:272393-272887:1
so has part: feature:272393-272887:1:exon
subclass of: SO_0000010

position:272393:1
position: 272393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272887:1
position: 272887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272393-272887:1:exon

TOCE_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: moaC
locus tag: TOCE_RS01430
old locus tag: Toce_0275
EC number: 4.6.1.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001612668.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cyclic pyranopterin monophosphate synthase MoaC
translation: MEFTHFDGQGRARMVDVSGKGETVRTAVARGYVFMKPETLSMIKEGRIKKGDVLAVAQVAGIMAAKKTPDIIPMCHNITLTGVDMDFSIIDERSAVAVEARVKCTGRTGVEMEALTAVSAACLTIYDMCKSVDKDMVIKNIQLVEKSGGTSGDFRREEEVPWEK
SIO_010081: TOCE_RS01430
subclass of: SO_0000673
so part of: TOCE_RS01430
location: 272393..272887
location: region:272393-272887:1
so has part: feature:272393-272887:1:exon

WP_013275109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272393-272887:1:exon

TOCE_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01435
old locus tag: Toce_0276
so part of: sequence
location: 272875..273801
location: region:272875-273801:1
so has part: feature:272875-273801:1:exon
subclass of: SO_0000010

position:272875:1
position: 272875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273801:1
position: 273801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272875-273801:1:exon

TOCE_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01435
old locus tag: Toce_0276
inference: COORDINATES: protein motif:HMM:NF013183.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MOSC domain-containing protein
translation: MGKVVAVCVSEKKGEKKRDVGKAMLIEGFGIEGDAHAGAWHRQVSLLALESIDKMREKGLSVGPGDFAENITTEGIDLSSLPVGTRLRINDVLLEVTQIGKECHERCAIYRQAGDCIMPKEGIFARVLRGGVVSAGDEIEVIPVIRVGILTASDRGAKGEREDLSGKVIEEMMEAVNGRIEEYVMVPDDLEAIKNSLLAMCEKGLDLVLTTGGTGLSPRDNTPEATLAVVEKQVPGIPEAMRQKSLEKTPNAMLSRAVAGIRGRTLIINLPGSPKAVRENLEVVLPALPHAVELLRGRVRDCGRPDRH
SIO_010081: TOCE_RS01435
subclass of: SO_0000673
so part of: TOCE_RS01435
location: 272875..273801
location: region:272875-273801:1
so has part: feature:272875-273801:1:exon

WP_013275110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272875-273801:1:exon

TOCE_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: groES
locus tag: TOCE_RS01440
old locus tag: Toce_0277
so part of: sequence
location: 274127..274411
location: region:274127-274411:1
so has part: feature:274127-274411:1:exon
subclass of: SO_0000010

position:274127:1
position: 274127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274411:1
position: 274411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274127-274411:1:exon

TOCE_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: groES
locus tag: TOCE_RS01440
old locus tag: Toce_0277
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777515.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: co-chaperone GroES
translation: MNIRPLGDRIVIKVLEKEEKTKGGIVLPDTAKEKPQKGEVIAVGTGEIIDGKRVPLEVKVGDKIIFSKYAGTEVKFDDEEYLILRQSDVLAIIE
SIO_010081: TOCE_RS01440
subclass of: SO_0000673
so part of: TOCE_RS01440
location: 274127..274411
location: region:274127-274411:1
so has part: feature:274127-274411:1:exon

WP_013275111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274127-274411:1:exon

TOCE_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: groL
locus tag: TOCE_RS01445
old locus tag: Toce_0278
so part of: sequence
location: 274436..276046
location: region:274436-276046:1
so has part: feature:274436-276046:1:exon
subclass of: SO_0000010

position:274436:1
position: 274436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276046:1
position: 276046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274436-276046:1:exon

TOCE_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: groL
locus tag: TOCE_RS01445
old locus tag: Toce_0278
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777516.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chaperonin GroEL
translation: MAKQIKFNEDARRALLKGIDKLANTVKVTLGPKGRNVVLDKKFGTPTITNDGVTIAREIELEDPFENMGAQLIKEVATKTQDVAGDGTTTATLLAQAIIHEGMKNVVAGANPMLIKKGIEKAVKAIVEELKTFSKPVETKEAIAQVASISAADEEIGNLIAEAMEKVGKDGVITVEESKTMGTTLEVVEGMEFDRGYISPYMVTDAEKMEAVLDDPYILITDKKLSNIQDLIPILEKVVQAGAKLLIIAEDVEGEALATLVVNKLRGTLLSVAVKAPGFGDRRKAMLQDIAILTGGQVISEELGIDIKTVTMDMLGRARQVKVNKEKTIIVDGAGSKEEIKKRINSIKAQIEETTSDFDREKLQERLAKLAGGVAVIKVGAATETELKEKKHRIEDALSATKAAVEEGIVPGGGTAFINALPALDKLSVDGDEKIGVEIIRRALEEPVRQIAYNAGLDGSVIVEKLKGMEKGIGFDALREEFGDMIKKGIVDPTKVTRSTLQNAASVAAMVLTTEAVVAELPEKEKNQPMPNPDMY
SIO_010081: TOCE_RS01445
subclass of: SO_0000673
so part of: TOCE_RS01445
location: 274436..276046
location: region:274436-276046:1
so has part: feature:274436-276046:1:exon

WP_013275112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274436-276046:1:exon

TOCE_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01450
old locus tag: Toce_0279
so part of: sequence
location: complement(276217..276651)
location: region:276217-276651:-1
so has part: feature:276217-276651:-1:exon
subclass of: SO_0000010

position:276217:-1
position: 276217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276651:-1
position: 276651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276217-276651:-1:exon

TOCE_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01450
old locus tag: Toce_0279
inference: COORDINATES: protein motif:HMM:NF013098.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VOC family protein
translation: MVGVEIDMVVTDSLKALELYEKIFDIERVEVTDFPKGENEVIFTLYGVRFHMLDENPKFGLKAPNPDEPKTIWFNILVPDIKETFSKAISAGCTEVQPVTEMPDYGVSNAIFIDPFGYQWMLHQIHKEVSFEERIRLWEEKRDN
SIO_010081: TOCE_RS01450
subclass of: SO_0000673
so part of: TOCE_RS01450
location: complement(276217..276651)
location: region:276217-276651:-1
so has part: feature:276217-276651:-1:exon

WP_013275113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276217-276651:-1:exon

TOCE_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: istA
locus tag: TOCE_RS01455
old locus tag: Toce_0280
so part of: sequence
location: 276847..278361
location: region:276847-278361:1
so has part: feature:276847-278361:1:exon
subclass of: SO_0000010

position:276847:1
position: 276847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278361:1
position: 278361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276847-278361:1:exon

TOCE_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: istA
locus tag: TOCE_RS01455
old locus tag: Toce_0280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011837913.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MTHIDNIRKAFFMKGQNISEIAREFQKDRKTIRKYIYQEDWNTRVKVEEVKHTFPKLDPFKADIDQWLEEDKKARKKQRHTAKRIYDRLCEKYQDKFNCSYRTVAGYVAMRKKELYQDNSCRLPLEHIPGEAQVDFGEADFYENGTLHHGFYLNLSFPYSNVGYTQLFKGENQECLFQGLKDIFEHLGGVPRKLWFDNASTIVKLSKNGERKLTDAFLRFKQHYGFEAVFCNPASGHEKGNVENKVGYHRRNLLVPVPRFERLEDFNRELLRLCDQDMHREHYRKEASIAELFNEDRKALLELPTVPYEVAGYITVKTNAYAKFSLNGGKHLYSTAPKYANSRVLVKITAHEVIPLDESHREIVRHQRLYGDNKQESMDWLPYLTQLSRCPGALKYSGIYSMLPDPLREYLDGLSKSERGKALKALAVLCTKSSFEQAVNAVAEALLYGVQDLDSLVAIHNRITGITPQLEPVKIPEGVPELTAFRFNAEDYDKAFLKGGANLC
SIO_010081: TOCE_RS01455
subclass of: SO_0000673
so part of: TOCE_RS01455
location: 276847..278361
location: region:276847-278361:1
so has part: feature:276847-278361:1:exon

WP_083768516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276847-278361:1:exon

TOCE_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: istB
locus tag: TOCE_RS01460
old locus tag: Toce_0281
so part of: sequence
location: 278355..279086
location: region:278355-279086:1
so has part: feature:278355-279086:1:exon
subclass of: SO_0000010

position:278355:1
position: 278355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279086:1
position: 279086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278355-279086:1:exon

TOCE_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: istB
locus tag: TOCE_RS01460
old locus tag: Toce_0281
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013275115.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MLKDEIAACCKALKLSRNLVENCDKIEAQSHEEYLLKLLRLELEHRDASRKDRLLKNAGFYTIKTFAGYIFDEIKLPQGLTPQDLKDCKFLEEKKNLILYGNVGTGKTHLATAIGVEACKKGYNVKFFRTAALVNRLVEARKGGELSGLLKQLSKPDLLICDEWGYVPLDREGAQLLFQVISDCYERRSVVITTNLEFSRWASIFYDEQMTAAMIDRLIHHSYLLIFDGQSYRMRQSLMRQLS
SIO_010081: TOCE_RS01460
subclass of: SO_0000673
so part of: TOCE_RS01460
location: 278355..279086
location: region:278355-279086:1
so has part: feature:278355-279086:1:exon

WP_013275115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278355-279086:1:exon

TOCE_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01470
old locus tag: Toce_0283
so part of: sequence
location: 280010..280330
location: region:280010-280330:1
so has part: feature:280010-280330:1:exon
subclass of: SO_0000010

position:280010:1
position: 280010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280330:1
position: 280330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280010-280330:1:exon

TOCE_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01470
old locus tag: Toce_0283
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSVVFEVRRRLAKAPRPAFVAALLRDDGTVIDIVPAVDNKSIEAAAGRRRARKAVIVAFLENVSQEKLREIVLRYNGLMLEAEFYAIVQDRPTYYTVARLKKKAG
SIO_010081: TOCE_RS01470
subclass of: SO_0000673
so part of: TOCE_RS01470
location: 280010..280330
location: region:280010-280330:1
so has part: feature:280010-280330:1:exon

WP_013275117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280010-280330:1:exon

TOCE_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01475
old locus tag: Toce_0284
so part of: sequence
location: 280418..280759
location: region:280418-280759:1
so has part: feature:280418-280759:1:exon
subclass of: SO_0000010

position:280418:1
position: 280418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280759:1
position: 280759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280418-280759:1:exon

TOCE_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01475
old locus tag: Toce_0284
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MALDDLEKAKKEVTASGSGEEARITEIGYFYLAQQINTLMQIHNEFRNNVDLRFDSLRQEIKQQIDGIKQELKGEMDSVKQQNGGMRQEFKGEIDSVKQQIDGFRQALVGEIN
SIO_010081: TOCE_RS01475
subclass of: SO_0000673
so part of: TOCE_RS01475
location: 280418..280759
location: region:280418-280759:1
so has part: feature:280418-280759:1:exon

WP_013275118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280418-280759:1:exon

TOCE_RS12230
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12230
so part of: sequence
location: 280760..280927
location: region:280760-280927:1
so has part: feature:280760-280927:1:exon
subclass of: SO_0000010

position:280760:1
position: 280760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280927:1
position: 280927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280760-280927:1:exon

TOCE_RS12230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTEINSVKSDTRSLKDEINELKKEFNSLKYWFIGSVIGILGILVAIIGLIVKIG
SIO_010081: TOCE_RS12230
subclass of: SO_0000673
so part of: TOCE_RS12230
location: 280760..280927
location: region:280760-280927:1
so has part: feature:280760-280927:1:exon

WP_187286578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280760-280927:1:exon

TOCE_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01480
old locus tag: Toce_0285
so part of: sequence
location: 280987..281688
location: region:280987-281688:1
so has part: feature:280987-281688:1:exon
subclass of: SO_0000010

position:280987:1
position: 280987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281688:1
position: 281688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280987-281688:1:exon

TOCE_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01480
old locus tag: Toce_0285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778054.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MQQLSCGRILVVEDEDSIRRFIVINLKRNGYEVIEAASGEEALMKAMEGKPDLVVLDVMLPGMDGFEVCRLLREKLPDMAVIMLTARGQDIDKIMGLELGADDYVVKPFNPLELTARIRAVLRRIRKAGLEDEKISSGPFMLDLKGHRVLKKGEELDLTPREFDLMALFMKNPGKAFSRDEILNAVWGADYVGDPKTVDVHIRRLREKVEDDPGRPEYIETVWGIGYRWREKY
SIO_010081: TOCE_RS01480
subclass of: SO_0000673
so part of: TOCE_RS01480
location: 280987..281688
location: region:280987-281688:1
so has part: feature:280987-281688:1:exon

WP_013275119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280987-281688:1:exon

TOCE_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01485
old locus tag: Toce_0286
so part of: sequence
location: 281685..283136
location: region:281685-283136:1
so has part: feature:281685-283136:1:exon
subclass of: SO_0000010

position:281685:1
position: 281685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283136:1
position: 283136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281685-283136:1:exon

TOCE_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01485
old locus tag: Toce_0286
inference: COORDINATES: protein motif:HMM:NF014567.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MKGIKARLLKSFLAVILLTVIIFEIILIISVRQYYFGNVEEVLSKQAEVSANFYRQYLARDDFLEKNADVLLESFSAPTAAQVQIIDEEGILLADSQFAGHGGAVGTPDVKKALKGLPSKWQGRMPGTGERVLAVSYPLKSGDTVVGVVRFVTSLEGVNGVVGKIAVILISIGLAAVIISVFAAAILSQTIVKPLNDITRVAEEMAKGKFTARAPKRYDDEVGRLADTLNFMAQEIMRQEELKNEFIASVSHELRTPLTAIKGWTITLLSAIRGTSQAGRSDIRENAGVPDRRVYLNLDELIEGLEIITKESERLSELVEELLDFSRFEAGAIKLNLDKVALVDTLNYIKTQMMPRAKRQAVEFEIYPEEGLPEILADENRIKQVLINLLDNAFKFTPAGGRVRVKAESANDSVRIIVEDTGCGIPPEDLPHVTKKFYKAKSKQPGSGLGLAICDEIVRLHGGRMEITSAPGKGTRVEVILPV
SIO_010081: TOCE_RS01485
subclass of: SO_0000673
so part of: TOCE_RS01485
location: 281685..283136
location: region:281685-283136:1
so has part: feature:281685-283136:1:exon

WP_013275120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281685-283136:1:exon

TOCE_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01490
old locus tag: Toce_0287
so part of: sequence
location: 283269..284456
location: region:283269-284456:1
so has part: feature:283269-284456:1:exon
subclass of: SO_0000010

position:283269:1
position: 283269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284456:1
position: 284456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283269-284456:1:exon

TOCE_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01490
old locus tag: Toce_0287
inference: COORDINATES: protein motif:HMM:NF024574.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MSRLKMFAAIIISGTLLLAGCSMLPAPGSTIRPPQPASTPVENEEDIVPVVQKFLPPGAQLEQYGSGPAVRQGDIDAVDGKSEILAVYRVGNNTNEIGAFVLKFKDGEWQKVWQQQGFGYALDLMEFADITGDGKPEVLIGTTIGASAGNGLDIFSWQQDTLKKIAGTGYHRLEILHLSGNSTEKGYDGRAQLAVWQKDTITAMAVDVLRWEEIGLVPAVDLYREYFPKVVEYYEEQLKKAPDAPALWFYLADAQQKAGMAEEALKSAEKGLALKGDYPQDYRFKVVMGRALNDLGEYQRAISFFDEVMKAKEPLPPDIGQQGEPAYLKKIKAEALIDMGKSYEGLRQYEKAEDCYRRSLEITKSLFKEDSIEKKLALMPAEKALQRLKGVRGNE
SIO_010081: TOCE_RS01490
subclass of: SO_0000673
so part of: TOCE_RS01490
location: 283269..284456
location: region:283269-284456:1
so has part: feature:283269-284456:1:exon

WP_013275121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283269-284456:1:exon

TOCE_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01495
old locus tag: Toce_0288
so part of: sequence
location: 284580..285686
location: region:284580-285686:1
so has part: feature:284580-285686:1:exon
subclass of: SO_0000010

position:284580:1
position: 284580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285686:1
position: 285686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284580-285686:1:exon

TOCE_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01495
old locus tag: Toce_0288
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013779475.1
GO function: GO:0016755 - aminoacyltransferase activity [Evidence IEA]
GO process: GO:0044038 - cell wall macromolecule biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidoglycan bridge formation glycyltransferase FemA/FemB family protein
translation: MDFIINGDPSKYTKFVETHPKGHVLQTLEWAKVKEDNWRPIYVTVEEKGAVKASMLLLLRQLPMIRKNIIYSPRGPVCDMHDFDTLKFLMDNVRKLARKNNAIMLKIDPDISIKDQIVANNLKKLGFKQNMEALNFEGIQPRFVFRLDITPSLEELLMSFHPKTRYNIRLAQRRGVKIRIGKREDLKEFHRIMEITGLRDGFVVRSLDYFEKMYDSLEPRGYLELALAEYEGKTIAGIICLFCGTKCWYLYGASSNEHRNVMPNYLLQWEMIKRAKERGCTLYDFRGVSGDLNPDNPLYGLYRFKKGFNGEFTEFIGEFDMVLSPFWYTVWQKGIPIFRNIRRKITLMLKKSKFEDKRSSTKDELGAH
SIO_010081: TOCE_RS01495
subclass of: SO_0000673
so part of: TOCE_RS01495
location: 284580..285686
location: region:284580-285686:1
so has part: feature:284580-285686:1:exon

WP_013275122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284580-285686:1:exon

TOCE_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: alr
locus tag: TOCE_RS01500
old locus tag: Toce_0289
so part of: sequence
location: 285686..286840
location: region:285686-286840:1
so has part: feature:285686-286840:1:exon
subclass of: SO_0000010

position:286840:1
position: 286840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285686-286840:1:exon

TOCE_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: alr
locus tag: TOCE_RS01500
old locus tag: Toce_0289
EC number: 5.1.1.1
inference: COORDINATES: protein motif:HMM:TIGR00492.1
GO function: GO:0008784 - alanine racemase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine racemase
translation: MGPYKKYMEVNLRALRQNYETIRREVGVPVMAVVKGDAYGHGAKDVALALQEAGVEWFGVEFLEEAVELREAGIKGRILCLTGPVTREDCEIFIEKDVIPTIYNLDRADLLNKTAARRGVSCRVHLKFDTGLGRFGFLYEDLDRVIDGLRSFSHLIYEGAYTHFAEAFAKKPDYTLYQLSVFQRVLDKLEQSGIKVAIRHAANSVAAMDFPEARLDMVRIGSALYGITMFKNTSVRLERVARLKVKIIDVKSLPRGSYIGYGRTYKTQRDTVIGIIPVGYFEGLKVQRRNYAFTLVGLLRNIYHEIKDFLNPVPLVFMDGKPLPILGRIGMQLTAIDLTGTGAGIGDEVTVAIDPVYFRYGARLYTDSRDVQEGFLPGIEKGVM
SIO_010081: TOCE_RS01500
subclass of: SO_0000673
so part of: TOCE_RS01500
location: 285686..286840
location: region:285686-286840:1
so has part: feature:285686-286840:1:exon

WP_013275123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285686-286840:1:exon

TOCE_RS12370
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12370
old locus tag: Toce_0290
so part of: sequence
location: complement(287150..287467)
location: region:287150-287467:-1
so has part: feature:287150-287467:-1:exon
subclass of: SO_0000010

position:287150:-1
position: 287150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287467:-1
position: 287467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287150-287467:-1:exon

TOCE_RS12370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12370
old locus tag: Toce_0290
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MVLTKEYTTSSRTFKHLTPYERGKICALLKEGFSPTQIAKKLYGKSISGRPYSIEKREEFGHWEIDTVLGKRSSDHVLLTLTERKTRYHLLFPLANKTAEAVDEA
SIO_010081: TOCE_RS12370
subclass of: SO_0000673
so part of: TOCE_RS12370
location: complement(287150..287467)
location: region:287150-287467:-1
so has part: feature:287150-287467:-1:exon

WP_041423819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287150-287467:-1:exon

TOCE_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01510
old locus tag: Toce_0292
so part of: sequence
location: 288460..291060
location: region:288460-291060:1
so has part: feature:288460-291060:1:exon
subclass of: SO_0000010

position:288460:1
position: 288460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291060:1
position: 291060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288460-291060:1:exon

TOCE_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01510
old locus tag: Toce_0292
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013276656.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-54-dependent transcriptional regulator
translation: MSDVDIKLNRKDKVYKKLKELTESLTLNDLNVDRKFGFEAGFIGKKIGINRNNTSKELNRLVREGKAVKIKGKPVLYLDKNCLETRWKLKITDHAIKDYETFKKLFLNSLEPTQNFEMISNSAPYRSILDRLIGADESLKAQIEQAKAAILYPPHGLHTLIVGPTGVGKTTFAEAMYRYAVEMGKIPATAPFVVFNCADYAENPQLLLSQLFGYVRGAFTGADREKKGLVEQADGGILFLDEVHRLPPEGQEMMFLLMDKGIYRRLGESENTRQARVLIIAATTEDPKSALLHTFLRRIPVVIMLPGLEERSLRERMAFVCRFFREESARIKVPLKVSKEVLKAFLLYDCPGNIGQLKSDIQLICARAFLDYMTFKKDEVEVKLSHLSRRVREGFFKIGEKRGEIAQKFNLGVGEDVVFDGKDENMWDNLEGTVFIDEYKTADDFYEVIESSWNEFSRKGLSERKIREMVDRQIEEYFDGIFSRIKLKGPVVDRDALAKIVSPRILKTVEDTLTDMREALGGAFSQKFIYSVALHVSILLERLRVGTVISHPDKKSIAREHPLEYELARKVKAKLEERLFIEIPEDEIAFLAMLIYAAKVKKEQGNIGVLVISHGRAAASTMAQVANELLGVNHARALDMPLEEKVETVLEKAVEEVKRIDRGKGVLILVDMGSLAAFSEIITERTGIPTRTVEMVSTPMVIEATRKALLPDMTLDMLAEDVRCMSPYIGKGQHEIRSATYGEYKGGYFRGILIDILGKTLTFLNPQKACDNLYEVLKKVLHKFDRKIDDDIYVKFLFHCSCMIERIIRGEPLPYKNLKAIKKSRSGIFDVLKTQFELIEETFGIQIPDTEFAYIVEMLDTHFDTL
SIO_010081: TOCE_RS01510
subclass of: SO_0000673
so part of: TOCE_RS01510
location: 288460..291060
location: region:288460-291060:1
so has part: feature:288460-291060:1:exon

WP_245523135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288460-291060:1:exon

TOCE_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01515
old locus tag: Toce_0293
so part of: sequence
location: 291298..292350
location: region:291298-292350:1
so has part: feature:291298-292350:1:exon
subclass of: SO_0000010

position:291298:1
position: 291298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292350:1
position: 292350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291298-292350:1:exon

TOCE_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01515
old locus tag: Toce_0293
inference: COORDINATES: protein motif:HMM:NF024989.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: galactitol-1-phosphate 5-dehydrogenase
translation: MKAAKFYGIRDVRIEDIPEPTIESGNDVIIKVKAVGICGSDISKYGKTGPHLPGEVPGHEFSGIVVEVGPNVKSVKVGDRVAVCPSLPCFQCDFCKQGIFSECESLNILGNHNHLGAFAEYTKISERNLVKIPEDIDFETAAGMEPACIAGHGLFRAKVKVEDTVAVLGVGPIGLFLIQWAKIFGASKVIAIDIFDEKLRIAKELGADFCINSKICDPVAKVKEITDSKGVDVAMESAGTSQTCAQVLLLPRKGGKVLYAGVPYSDVTFSRDSFEKIMRNELTLIGSWFSNSFPFPGREWYSALRYMREGKLKVKPLITHRIGIEDIPATLEKIYKREIFFGKIMVIPEE
SIO_010081: TOCE_RS01515
subclass of: SO_0000673
so part of: TOCE_RS01515
location: 291298..292350
location: region:291298-292350:1
so has part: feature:291298-292350:1:exon

WP_013275126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291298-292350:1:exon

TOCE_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01520
old locus tag: Toce_0294
so part of: sequence
location: 292409..292843
location: region:292409-292843:1
so has part: feature:292409-292843:1:exon
subclass of: SO_0000010

position:292409:1
position: 292409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292843:1
position: 292843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292409-292843:1:exon

TOCE_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01520
old locus tag: Toce_0294
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013276655.1
GO component: GO:1902495 - transmembrane transporter complex [Evidence IEA]
GO function: GO:0016301 - kinase activity [Evidence IEA]
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS sugar transporter subunit IIA
translation: MIGILVVTHGDFGKQLIKSAELILGSQSHYETLGLFHGDNIDQFGERILEKIKSLDDGDGVLAFIDLYGGSPFNAITLNFKKLTAKHKLQCITGVNLPMILEAFSSRQFCQIEELKKCCLDVGKKGIKDITEQLNSIEMDVKTN
SIO_010081: TOCE_RS01520
subclass of: SO_0000673
so part of: TOCE_RS01520
location: 292409..292843
location: region:292409-292843:1
so has part: feature:292409-292843:1:exon

WP_013275127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292409-292843:1:exon

TOCE_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01525
old locus tag: Toce_0295
so part of: sequence
location: 292862..293338
location: region:292862-293338:1
so has part: feature:292862-293338:1:exon
subclass of: SO_0000010

position:292862:1
position: 292862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293338:1
position: 293338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292862-293338:1:exon

TOCE_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01525
old locus tag: Toce_0295
EC number: 2.7.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013276654.1
GO function: GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS sugar transporter subunit IIB
translation: MSDIVLARIDDRLIHGQVITGWVRATKANRIIIVDDGVAQDPFMTKVMLMAAPPAIKVEVYNIQQAVDKLMSSETEQDRIIILVKTPKTIYELIKKGIDLKEVNVGGMGAGPGRKQMYKNISVSQEERNIFREIINLGVQVNIRIVPDDKSISIEKFL
SIO_010081: TOCE_RS01525
subclass of: SO_0000673
so part of: TOCE_RS01525
location: 292862..293338
location: region:292862-293338:1
so has part: feature:292862-293338:1:exon

WP_013275128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292862-293338:1:exon

TOCE_RS01530
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01530
old locus tag: Toce_0296
so part of: sequence
location: complement(293419..294642)
location: region:293419-294642:-1
so has part: feature:293419-294642:-1:exon
subclass of: SO_0000010

position:293419:-1
position: 293419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294642:-1
position: 294642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293419-294642:-1:exon

TOCE_RS01530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01530
old locus tag: Toce_0296
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013275237.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MFYGGIDVAKHSHEVCLVNDSGDIVLKMHLDNNHKGMNKLLQALERLGLKPDDVKFCLEATGHYWLPIYCYLTNQGFELHVINPIQSDALRNLYVRKTKTDQKDALLLADLLRLGRAPETRLPSETTLKLQSLSRLRFEFVRQVGGLKNRVLGILDRIFPEYPDCFSDVFIRTSRELLKSYPEPEELAEVDLSELSAFLKEHSRGRFGEERAKKIQSLAKGTFGITMALDAFTLQLRLLVEQIEFIEEQIKVIEDAINEVMEELRPSKDTPYRHVIETIPGIGPVLAAAIIGEIGDISRFPNPRALVAYAGLDATVRASGLFEGTRNRMSKRGSPVLRNSLWLAAVSARRFNPELRAYYEQKRSQGKHSNVATGAVARKLVHLIYSLWKDNRPYDPDYQWSPPGKNA
SIO_010081: TOCE_RS01530
subclass of: SO_0000673
so part of: TOCE_RS01530
location: complement(293419..294642)
location: region:293419-294642:-1
so has part: feature:293419-294642:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293419-294642:-1:exon

TOCE_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01535
old locus tag: Toce_0297
so part of: sequence
location: 294957..295634
location: region:294957-295634:1
so has part: feature:294957-295634:1:exon
subclass of: SO_0000010

position:294957:1
position: 294957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295634:1
position: 295634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294957-295634:1:exon

TOCE_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01535
old locus tag: Toce_0297
inference: COORDINATES: protein motif:HMM:NF015566.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0034219 - carbohydrate transmembrane transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS sugar transporter subunit IIC
translation: MKISFLQAALIGLFYYISWSPWFSYVGFFTWNRPLLAGFVTGIILGKPLEGAIIGASINVIYLGFISAGGAQMGDPAFAGYVGTALALASNLDTKAVMAVAVPLGTIATILWITKMTIDSLFVHWADREAEKGNMRAVALINVIPPQILLFILSFVPATLVVYYGPNAVSGLLDVMGPKVLHVFEVIGAMLPALGIAMNLRLIGNSFTMPFFVLGVLLSSISKWI
SIO_010081: TOCE_RS01535
subclass of: SO_0000673
so part of: TOCE_RS01535
location: 294957..295634
location: region:294957-295634:1
so has part: feature:294957-295634:1:exon

WP_223156830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294957-295634:1:exon

TOCE_RS12035
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12035
so part of: sequence
location: 295742..295912
location: region:295742-295912:1
so has part: feature:295742-295912:1:exon
subclass of: SO_0000010

position:295742:1
position: 295742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295912:1
position: 295912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295742-295912:1:exon

TOCE_RS12035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12035
inference: COORDINATES: protein motif:HMM:NF015570.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS system mannose/fructose/sorbose family transporter subunit IID
translation: MPEGKKRLSKGDILKSYLLWFFFAQSNYNYERLQATAFAHAMIPVYCIIKMDRVAK
SIO_010081: TOCE_RS12035
subclass of: SO_0000673
so part of: TOCE_RS12035
location: 295742..295912
location: region:295742-295912:1
so has part: feature:295742-295912:1:exon

WP_148218358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295742-295912:1:exon

TOCE_RS01540
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: istA
locus tag: TOCE_RS01540
old locus tag: Toce_0298
so part of: sequence
location: 296037..297551
location: region:296037-297551:1
so has part: feature:296037-297551:1:exon
subclass of: SO_0000010

position:296037:1
position: 296037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297551:1
position: 297551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296037-297551:1:exon

TOCE_RS01540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: istA
locus tag: TOCE_RS01540
old locus tag: Toce_0298
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011837913.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MTHIDNIRKAFFMKGQNISEIAREFQKDRKTIRKYIYQEDWNTRVKVEEVKHTFPKLDPFKADIDQWLEEDKKARKKQRHTAKRIYDRLCEKYQDKFNCSYRTVAGYVAMRKKELYQDNSCRLPLEHIPGEAQVDFGEADFYENGTLHHGFYLNLSFPYSNVGYTQLFKGENQECLFQGLKDIFEHLGGVPRKLWFDNASTIVKFLKNGERKLTDAFLRFKQHYGFEAVFCNPASGHEKGNVENKVGYHRRNFLVPVPRFEKLEDFNRELLRLCDQDMHREHYRKEASIAELFNEDRKALLDLPTVAYEVADYITVKTNAYAKFSLNGGKHLYSTAPKYANSRVLVKITAHEIIPLDESHREIVRHQRLYGDNKQESMDWLPYLTQLPRCPGALKYSGIYSMLPDPLREYLDGCSKSERGKALKAIASLCAKSSFEQAVNAVAEALLYGVQDLDSLVAIHNRMTSITPPLEPVKIPEGVPELTAFRFNAEDYDKAFLKGGANVC
SIO_010081: TOCE_RS01540
subclass of: SO_0000673
so part of: TOCE_RS01540
location: 296037..297551
location: region:296037-297551:1
so has part: feature:296037-297551:1:exon

WP_083768517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296037-297551:1:exon

TOCE_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: istB
locus tag: TOCE_RS01545
old locus tag: Toce_0299
so part of: sequence
location: 297545..298276
location: region:297545-298276:1
so has part: feature:297545-298276:1:exon
subclass of: SO_0000010

position:297545:1
position: 297545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298276:1
position: 298276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297545-298276:1:exon

TOCE_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: istB
locus tag: TOCE_RS01545
old locus tag: Toce_0299
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013275115.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MLKDEIAACCKALKLSRNLVENCDKIEAQSHEEYLLKLLRLELEHRDASRKDRLLKNAGFYTIKTFADYIFDGIKLPQGLTPQDLKDCKFLEEKKNLILYGNVGTGKTHLATAIGVEACKKGFNVKFFRTAALVNRLVEARKGGELSGLLKQLSKPDLLICDEWGYVPLDREGAQLLFQVISDCYERRSVVITTNLEFSRWASIFYDEQMTAAMIDRLIHHSYLLIFDGQSYRMRQSLMRQLS
SIO_010081: TOCE_RS01545
subclass of: SO_0000673
so part of: TOCE_RS01545
location: 297545..298276
location: region:297545-298276:1
so has part: feature:297545-298276:1:exon

WP_013275130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297545-298276:1:exon

TOCE_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01550
old locus tag: Toce_0300
so part of: sequence
location: 298321..299043
location: region:298321-299043:1
so has part: feature:298321-299043:1:exon
subclass of: SO_0000010

position:298321:1
position: 298321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299043:1
position: 299043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298321-299043:1:exon

TOCE_RS01550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01550
old locus tag: Toce_0300
inference: COORDINATES: protein motif:HMM:NF015570.2
GO component: GO:1902495 - transmembrane transporter complex [Evidence IEA]
GO function: GO:0016301 - kinase activity [Evidence IEA]
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS system mannose/fructose/sorbose family transporter subunit IID
translation: MGNFLLQKTMIPIIKKLYTTKEDIIAAIKRHLVFFNTEPICGSVIHGITIAMEEEKANGEPISDEGINAIKTGLMGPLAGIGDTITQGIITPIMLAICIGLTMSGNIASPIIFVLAQYAIMIGISYTMWMNGYSYGKKAVETILEGGLINKVIEGASILGTLVMGGLVGRFVTLSTPIVININQVKFSLQKDLLDKIMPGLIPMLLTLLVLHLIKKGVSPIKMMGLLIVLGVIGGVLGIF
SIO_010081: TOCE_RS01550
subclass of: SO_0000673
so part of: TOCE_RS01550
location: 298321..299043
location: region:298321-299043:1
so has part: feature:298321-299043:1:exon

WP_083768453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298321-299043:1:exon

TOCE_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01555
old locus tag: Toce_0301
so part of: sequence
location: complement(299081..299821)
location: region:299081-299821:-1
so has part: feature:299081-299821:-1:exon
subclass of: SO_0000010

position:299081:-1
position: 299081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299821:-1
position: 299821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299081-299821:-1:exon

TOCE_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01555
old locus tag: Toce_0301
inference: COORDINATES: protein motif:HMM:NF015962.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-phosphosulfolactate phosphatase
translation: MFIEVYPTAQSVKDLNGKTAIVIDVLRATSVITTALHNGAERVIPVPSVEDAFRLARDLKGNSLLGGERRALKIPGFDLGNSPLEYKKELVEGKTVILTTSNGTKAIKASESAEHILIGCFLNASAAAGKALQTLSSETTGVAVLCAGTLGEFSLDDAACAGLIVDILVRNIKRINEIPELSDLAFACRDLYLEHRHDLKTFISHAAHYKRLLDLGLEKDIDYCLQQDVLDCVPVYEKKNMAVKIY
SIO_010081: TOCE_RS01555
subclass of: SO_0000673
so part of: TOCE_RS01555
location: complement(299081..299821)
location: region:299081-299821:-1
so has part: feature:299081-299821:-1:exon

WP_013275132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299081-299821:-1:exon

TOCE_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01560
old locus tag: Toce_0302
so part of: sequence
location: complement(299865..300398)
location: region:299865-300398:-1
so has part: feature:299865-300398:-1:exon
subclass of: SO_0000010

position:299865:-1
position: 299865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300398:-1
position: 300398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299865-300398:-1:exon

TOCE_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01560
old locus tag: Toce_0302
EC number: 2.7.7.-
inference: COORDINATES: protein motif:HMM:NF037100.2
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase domain-containing protein
translation: MDNIEKCVSELKTFSMLHQQYLICVLEGIIEYYKDSLLGLTIFGSYARGENRKNSDLDLLIILKKAPGFSERIKEFVNNIELAHESLGQQLYEEEDILCELSPYILSKEEALKFQPVYFDLTEHNKILFDPEGIISRIYGAEDFIPTEEYESEDAETAIKDAEFVLKTVEEAFKKGI
SIO_010081: TOCE_RS01560
subclass of: SO_0000673
so part of: TOCE_RS01560
location: complement(299865..300398)
location: region:299865-300398:-1
so has part: feature:299865-300398:-1:exon

WP_013275133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299865-300398:-1:exon

TOCE_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01565
old locus tag: Toce_0303
so part of: sequence
location: complement(300471..301643)
location: region:300471-301643:-1
so has part: feature:300471-301643:-1:exon
subclass of: SO_0000010

position:300471:-1
position: 300471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301643:-1
position: 301643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300471-301643:-1:exon

TOCE_RS01565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01565
old locus tag: Toce_0303
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013276875.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integrase core domain-containing protein
translation: MTLYQKLKASGNPQAVAQITISLLESHSVKETAKILGVTPRWVYKLRERFRLSNGDISACIKKRGPKFRMPNRTPEHIENLVVTLAKETNLGSKRLALFIKNTFNIQLSPFTIRNIRRRYGIHCRKHKTLTGSRRFATDFSAFEPLQLWQIDAKHIADQSALPPEAYASIFKNKLPPFQFTAIDIKTRLRFIAYADSLDFKNGLTFMLLVAAWLRAFGVKHQLFFQTDNGAEFGGSAGSRKRKLIQKLIFDHWNVSLLNIPERNKETNCFVERSHRTDDEEFYALNLKKVTSRTSFLKMAQNWILYFNYRRPHFGKNMNGMTPVEALKFYRCFYHPAIGSMPVVVLDQLSNYTSLLFDISSLPWDNLPRNKKLLNETMAHYRHSIFSTSL
SIO_010081: TOCE_RS01565
subclass of: SO_0000673
so part of: TOCE_RS01565
location: complement(300471..301643)
location: region:300471-301643:-1
so has part: feature:300471-301643:-1:exon

WP_013275134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300471-301643:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 555079
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00174
inference: COORDINATES: profile:INFERNAL:1.1.4
note: cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: adenosylcobalamin
so part of: sequence
location: 301837..302020
location: region:301837-302020:1
so has part: feature:301837-302020:1:region

position:301837:1
position: 301837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302020:1
position: 302020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301837-302020:1:region

TOCE_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01570
old locus tag: Toce_0304
so part of: sequence
location: 302126..302869
location: region:302126-302869:1
so has part: feature:302126-302869:1:exon
subclass of: SO_0000010

position:302126:1
position: 302126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302869:1
position: 302869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302126-302869:1:exon

TOCE_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01570
old locus tag: Toce_0304
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013275135.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO process: GO:0000041 - transition metal ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-coupling factor ABC transporter permease
translation: MNPLRKITFIAALLSLLPRYALAMHVMEGFLPFKWCLLWYSIYIPFLMAGLIYIKKNIAEEPSKKILLGFAGAFVFALSALKLPSVAGSSSHPTGIGLGAILLGPLPMAVIGGIVLLFQALLLAHGGITTLGANAFSMAVAGSFAAYGLYKVAGRVGLSKSASVFLGAASGDLMTYIITSLQLALAFPASRGGVAASFAGFSGIFAVTQLPLAIGEGILTVIVLNLLEIHAGVVVGRLVKGASNDEG
SIO_010081: TOCE_RS01570
subclass of: SO_0000673
so part of: TOCE_RS01570
location: 302126..302869
location: region:302126-302869:1
so has part: feature:302126-302869:1:exon

WP_245523158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302126-302869:1:exon

TOCE_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01575
old locus tag: Toce_0305
so part of: sequence
location: 302859..303143
location: region:302859-303143:1
so has part: feature:302859-303143:1:exon
subclass of: SO_0000010

position:302859:1
position: 302859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303143:1
position: 303143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302859-303143:1:exon

TOCE_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01575
old locus tag: Toce_0305
inference: COORDINATES: protein motif:HMM:NF014597.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-coupling factor ABC transporter substrate-binding protein
translation: MKDKKMKKSLLSTALPIALIFLILFVVANFLDSGLEGTDDRAADLALRMNPDYRPWFESVWEPGDDRTEKLLFGLQAVTGVGLAAYFFIRLKAG
SIO_010081: TOCE_RS01575
subclass of: SO_0000673
so part of: TOCE_RS01575
location: 302859..303143
location: region:302859-303143:1
so has part: feature:302859-303143:1:exon

WP_049817878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302859-303143:1:exon

TOCE_RS11570
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cbiQ
locus tag: TOCE_RS11570
old locus tag: Toce_0306
so part of: sequence
location: 303145..303852
location: region:303145-303852:1
so has part: feature:303145-303852:1:exon
subclass of: SO_0000010

position:303145:1
position: 303145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303852:1
position: 303852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303145-303852:1:exon

TOCE_RS11570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cbiQ
locus tag: TOCE_RS11570
old locus tag: Toce_0306
inference: COORDINATES: protein motif:HMM:NF014420.2
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0032778 - P-type cobalt transporter activity [Evidence IEA]
GO process: GO:0006824 - cobalt ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cobalt ECF transporter T component CbiQ
translation: MLLDNFAYNNNFRSVHPGEKLAFGLLMMFLGFISGPIVHLAVFAVMTGILVPGAGIPIRFYLRSLLIPPVFLLPGVLVVVISSGSFDEGMVLFSRSMALVSCFYFIAMTTPVPDILMLMHRLRVPDLFIELSLLTYRYLFVLLDAASRIHVSQNSRLGYAYCGRGLKSMAMLASSLLIKSLKTADELRISLEARGYDGKLRVLDHREYRISSRNIAVILTLTLLLVLLVLGKRIE
SIO_010081: TOCE_RS11570
subclass of: SO_0000673
so part of: TOCE_RS11570
location: 303145..303852
location: region:303145-303852:1
so has part: feature:303145-303852:1:exon

WP_013275137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303145-303852:1:exon

TOCE_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01585
old locus tag: Toce_0307
so part of: sequence
location: 303854..304687
location: region:303854-304687:1
so has part: feature:303854-304687:1:exon
subclass of: SO_0000010

position:303854:1
position: 303854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304687:1
position: 304687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303854-304687:1:exon

TOCE_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01585
old locus tag: Toce_0307
inference: COORDINATES: protein motif:HMM:TIGR01166.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MSNYLLEVQEVYFEYPGGIRALNGVSLAVERGKKVAFLGPNGAGKSTLFLHFNGILRPKKGRILYDGQELVYNRSFLREIRRKVGIVFQDPDAQLFAGTVFQEVSFGPMNLNLPSKDVRERVESALSAMGIRELMDRPVHLLSYGQKKRVSIADVLAMDPEVVVFDEPTAYLDPRHAGELVEMLDGLHAEGRQVILSTHDVDLAYSWADQIFVMKDGRVIGGGSPEEVFMDDELLKRADLKKPLLVEVSDALRQMGLLDGRFPKNARDLLECLREGR
SIO_010081: TOCE_RS01585
subclass of: SO_0000673
so part of: TOCE_RS01585
location: 303854..304687
location: region:303854-304687:1
so has part: feature:303854-304687:1:exon

WP_013275138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303854-304687:1:exon

TOCE_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01590
old locus tag: Toce_0308
so part of: sequence
location: 304690..306087
location: region:304690-306087:1
so has part: feature:304690-306087:1:exon
subclass of: SO_0000010

position:304690:1
position: 304690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306087:1
position: 306087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304690-306087:1:exon

TOCE_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01590
old locus tag: Toce_0308
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777571.1
GO function: GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cobyrinate a,c-diamide synthase
translation: MARGIMIAGTHSGSGKTTVSLGLMGAMAKRHKVIPFKVGPDYIDTAYHRFACGNHSYNLDAFLLGEERLKALYAEKAECGELAIAEGVMGFFDGMDSTGFGSSAHVAGLLSLPVILVVDASGMARSVSAMVKGFRDFDPGVRIAGVILNRVGGERHYALLKECIERDTGIPAVGFLPEDPEIALPERHLGLVPVWEMEGLKGKFERLFYHIERCVDLEKIWNISADAGRVAFTLPQEEPVLAGEKVRIALALDEAFNFYYRGGLELFENFGAELVPFSPLKDSALPEGASGIYIGGGFPEIFAGELSRNRPMLEAVKKAVLAGMPVYAECGGLMYLSRAIVDKEGRSFPMVEAFDMEAIMTGRLRRFGYARATVLKDNVLAERGTVLCGHEFHHSEVVGVVEDTSYLVEKPGGRGRWRCGFVRNNCLATYLHIDFYAYPELVRNFLNRCRSFCASALINEGSADR
SIO_010081: TOCE_RS01590
subclass of: SO_0000673
so part of: TOCE_RS01590
location: 304690..306087
location: region:304690-306087:1
so has part: feature:304690-306087:1:exon

WP_013275139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304690-306087:1:exon

TOCE_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01595
old locus tag: Toce_0309
so part of: sequence
location: 306084..306458
location: region:306084-306458:1
so has part: feature:306084-306458:1:exon
subclass of: SO_0000010

position:306084:1
position: 306084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306458:1
position: 306458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306084-306458:1:exon

TOCE_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01595
old locus tag: Toce_0309
inference: COORDINATES: protein motif:HMM:NF014016.2
GO function: GO:0016829 - lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CbiX/SirB N-terminal domain-containing protein
translation: MKALLIIAHGSRVDDSAGVMERLASKLKGMGRYDLAEVAYVQFQQPGIGEAVARLVERGAKEIVAVPAFLFRGVHVTRDIPGELKVSKDAHPGVKIFLAEPIGYDERICEILAERAAGEVVEIS
SIO_010081: TOCE_RS01595
subclass of: SO_0000673
so part of: TOCE_RS01595
location: 306084..306458
location: region:306084-306458:1
so has part: feature:306084-306458:1:exon

WP_013275140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306084-306458:1:exon

TOCE_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01600
old locus tag: Toce_0310
so part of: sequence
location: 306475..307125
location: region:306475-307125:1
so has part: feature:306475-307125:1:exon
subclass of: SO_0000010

position:306475:1
position: 306475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307125:1
position: 307125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306475-307125:1:exon

TOCE_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01600
old locus tag: Toce_0310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777573.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: precorrin-8X methylmutase
translation: MEYVNYIKDPEAIEKKSFEIIRSRIDARRFSDGELAVVQRVIHATADFDYEEILEFSPDAVEKGLAALKAGCGIVTDTRMAQAGINRRALEALGCRILCYVDDPEAVAIARERGITRSMAAMELASKDPKNLIFAIGNAPTALFKLAELIQEGKVRPSLVVGVPVGFVGAAESKETLFRLRVPSIITRGRKGGTTVAVSIVNALLYALVKEGPCGG
SIO_010081: TOCE_RS01600
subclass of: SO_0000673
so part of: TOCE_RS01600
location: 306475..307125
location: region:306475-307125:1
so has part: feature:306475-307125:1:exon

WP_013275141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306475-307125:1:exon

TOCE_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cbiD
locus tag: TOCE_RS01605
old locus tag: Toce_0311
so part of: sequence
location: 307118..308215
location: region:307118-308215:1
so has part: feature:307118-308215:1:exon
subclass of: SO_0000010

position:307118:1
position: 307118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308215:1
position: 308215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307118-308215:1:exon

TOCE_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cbiD
locus tag: TOCE_RS01605
old locus tag: Toce_0311
EC number: 2.1.1.195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777574.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cobalt-precorrin-5B (C(1))-methyltransferase CbiD
translation: MDRYVLKNGKKLRCGYTTGSCAAAASKAAVAMLFNGDIPGTVQIETPGGELLTIKIESAQKGPDWAVCCVRKDGGDDPDVTHGLLVCAKVRKIDGEGILVEAGEGIGTVTKPGLPVKPGEPAINPVPMAMIKREVAKVLPEGCGVRLVLSIPGGEKVAEKTFNPRLGIVGGLSILGTTGIVEPMSLESLKETLALELSVLSAQGIKNLVLTPGNYGKSYAIKSGIDESLIVSCGNYLGFTLEKAVEMKFEEVHLVGDIGKLIKVAAGIFNTAGRVADARAEIMAAYAAYFGAGPDTVRKVLASNTTEEAMELIEKSGINLSEFAAFVAGRVRDKCLWYTGGKIEVSVELISNKRGLLAAVGVEKW
SIO_010081: TOCE_RS01605
subclass of: SO_0000673
so part of: TOCE_RS01605
location: 307118..308215
location: region:307118-308215:1
so has part: feature:307118-308215:1:exon

WP_013275142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307118-308215:1:exon

TOCE_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cbiE
locus tag: TOCE_RS01610
old locus tag: Toce_0312
so part of: sequence
location: 308209..308850
location: region:308209-308850:1
so has part: feature:308209-308850:1:exon
subclass of: SO_0000010

position:308209:1
position: 308209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308850:1
position: 308850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308209-308850:1:exon

TOCE_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cbiE
locus tag: TOCE_RS01610
old locus tag: Toce_0312
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777575.1
GO function: GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO process: GO:0046140 - corrin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
translation: MVSVVGIGPGAPEYITPAALKRIKEAEVLVGAKRHLNLFKDLACKKIPLEAGLDLGKVLKSPGRVAVIATGDPGIYGILDLVLKHVSEEEVDVIPGISSVQYMMARLRLPAKDTAVVSLHGRGGDIVSAVRNHSTVVVLTDPVNNPVKIARLLLENGILDREIYVGQNLSYENEAIEKYGVKELAGSTGEFDINVVVIRICGNTESEYPMISF
SIO_010081: TOCE_RS01610
subclass of: SO_0000673
so part of: TOCE_RS01610
location: 308209..308850
location: region:308209-308850:1
so has part: feature:308209-308850:1:exon

WP_013275143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308209-308850:1:exon

TOCE_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cbiT
locus tag: TOCE_RS01615
old locus tag: Toce_0313
so part of: sequence
location: 308865..309416
location: region:308865-309416:1
so has part: feature:308865-309416:1:exon
subclass of: SO_0000010

position:308865:1
position: 308865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309416:1
position: 309416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308865-309416:1:exon

TOCE_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cbiT
locus tag: TOCE_RS01615
old locus tag: Toce_0313
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777576.1
GO function: GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO process: GO:0046140 - corrin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT
translation: MTKEETRVISLAKMRLKKNSVVWDIGAGTGSVSVEAALFCSEGRVFAVEKDKAALGLIVENARKFGATNLVPVPGEAPEALENLPDPDRIFIGGTGERTADVLKAASSRLKKDGVMVINAVTVETVYAATGLLEGEGFEWDLLLVNIASSRKAGQKHMMIARNPVFIITARPMGRDFENGECA
SIO_010081: TOCE_RS01615
subclass of: SO_0000673
so part of: TOCE_RS01615
location: 308865..309416
location: region:308865-309416:1
so has part: feature:308865-309416:1:exon

WP_187286579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308865-309416:1:exon

TOCE_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cobI
locus tag: TOCE_RS01620
old locus tag: Toce_0314
so part of: sequence
location: 309416..310105
location: region:309416-310105:1
so has part: feature:309416-310105:1:exon
subclass of: SO_0000010

position:310105:1
position: 310105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309416-310105:1:exon

TOCE_RS01620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cobI
locus tag: TOCE_RS01620
old locus tag: Toce_0314
EC number: 2.1.1.130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777577.1
GO function: GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: precorrin-2 C(20)-methyltransferase
translation: MKTKSAGKFYGVGVGPGDPELLTLRAVRVLEKVDIVIAPSAGGDSIAFEIAKPYIKGKLLKMPFEMGACGRARQEALDKNADLIRRMLLEGNDTAFITLGDPMTYSTFIYMTERLTDFEIEVIPGVTSFSAAAAKLLMPVAEGRKPFAVVPAGDREILEKALENFDNVVVMKVSSDYGGVLDLLEQKGFRSGLVVRCGHRDEVVTLEPEKYRGQKIDYLSVIIGKKVKP
SIO_010081: TOCE_RS01620
subclass of: SO_0000673
so part of: TOCE_RS01620
location: 309416..310105
location: region:309416-310105:1
so has part: feature:309416-310105:1:exon

WP_013275145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309416-310105:1:exon

TOCE_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cobM
locus tag: TOCE_RS01625
old locus tag: Toce_0315
so part of: sequence
location: 310102..310854
location: region:310102-310854:1
so has part: feature:310102-310854:1:exon
subclass of: SO_0000010

position:310102:1
position: 310102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310854:1
position: 310854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310102-310854:1:exon

TOCE_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cobM
locus tag: TOCE_RS01625
old locus tag: Toce_0315
EC number: 2.1.1.133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777578.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: precorrin-4 C(11)-methyltransferase
translation: MIYFIGAGPGDPDLITVKGANILASCGVVIYAGSLVNPDVLRYARRDARVYDSSGMNLEEIIDVMKSAHGEGLDVARLHTGDPSIYSAVREQAEMLKKLGIPFEIIPGVSSFTAAAAVLKSELTVPGVSQTVIITRVPGRTPVPERERLKSLAAHRATMAVFLSADRIKDVADELIQSYGPKTPVAVVYRATWEDQKVVRGTLEDIAGKVEEEGIKRTAVIIVGEALGDAFEFSKLYDPSFSHGFRSGTP
SIO_010081: TOCE_RS01625
subclass of: SO_0000673
so part of: TOCE_RS01625
location: 310102..310854
location: region:310102-310854:1
so has part: feature:310102-310854:1:exon

WP_013275146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310102-310854:1:exon

TOCE_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cbiG
locus tag: TOCE_RS01630
old locus tag: Toce_0316
so part of: sequence
location: 310851..311897
location: region:310851-311897:1
so has part: feature:310851-311897:1:exon
subclass of: SO_0000010

position:310851:1
position: 310851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311897:1
position: 311897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310851-311897:1:exon

TOCE_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cbiG
locus tag: TOCE_RS01630
old locus tag: Toce_0316
EC number: 3.7.1.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015294921.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cobalt-precorrin 5A hydrolase
translation: MKTAVIAVTERGAGIALRLRESLGSDIYLPEKLIKAGSPGTYPIEGDFIEFVHGIFPKYRGLIFVTATGIAVRSIAGALKGKRLDPAVVVLDERARFAISLVSGHLGGANDLAKAVAKATGAVPVITTASDLAGIETPDVTAAKLGLYIENFEGLKRVSSCLLRGDKVAYVLESGYPVDAIERRHFEQNAVICDRVPRDAAAAVFITDKRVNPPGIPHVILRPRSLVLGIGARKGAKYPELLRLLSEALDQLNLSVTGIGRIATVDLKREEESINELSRSLKVPVEFYTVKRLQEVENRFPLSEFVKQRIGVGSVARPSAFLASNGGEELGYFRGGGFTLAIFRRRMK
SIO_010081: TOCE_RS01630
subclass of: SO_0000673
so part of: TOCE_RS01630
location: 310851..311897
location: region:310851-311897:1
so has part: feature:310851-311897:1:exon

WP_013275147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310851-311897:1:exon

TOCE_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cobJ
locus tag: TOCE_RS01635
old locus tag: Toce_0317
so part of: sequence
location: 311894..312625
location: region:311894-312625:1
so has part: feature:311894-312625:1:exon
subclass of: SO_0000010

position:311894:1
position: 311894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312625:1
position: 312625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311894-312625:1:exon

TOCE_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cobJ
locus tag: TOCE_RS01635
old locus tag: Toce_0317
EC number: 2.1.1.131
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777580.1
GO function: GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: precorrin-3B C(17)-methyltransferase
translation: MSWIKVVGIGPGSSEDLTFRAAKALKDSDVVVGYTTYINLIKPLIEGKMVIVSGMRDEVERCRKALELAGKGLKVSLVSGGDPGVYGMAGLLLEVALKGGAQTEIEVIPGVSAVNSAAAILGAPLMQDFAVVSLSDHLVPWEVIEKRLSLAAQADFVIAIYNPGSSERPENLSRAWEILMRHKKPDTPVGIVRKASREGQSVAITRLDKLPEYNVDMSTIVVVGGESTFISGRWIITPRGYRV
SIO_010081: TOCE_RS01635
subclass of: SO_0000673
so part of: TOCE_RS01635
location: 311894..312625
location: region:311894-312625:1
so has part: feature:311894-312625:1:exon

WP_013275148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311894-312625:1:exon

TOCE_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cobK
locus tag: TOCE_RS01640
old locus tag: Toce_0318
so part of: sequence
location: 312622..313380
location: region:312622-313380:1
so has part: feature:312622-313380:1:exon
subclass of: SO_0000010

position:312622:1
position: 312622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313380:1
position: 313380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312622-313380:1:exon

TOCE_RS01640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cobK
locus tag: TOCE_RS01640
old locus tag: Toce_0318
EC number: 1.3.1.54
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777581.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0016994 - precorrin-6A reductase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: precorrin-6A reductase
translation: MILVLAGTKDGRLLAEKLSSMGFEVFASVVTDYGGQLLGERVRVRIGPFGDTGLREFIARRGIRVVVDATHPFAKDISLKAIEVTRQMGVKYIRYERKESAREYYTGVIMARDFEDAAQKAAEFHTIFLTIGSRNLEKFAGLKGMGKKLVVRVLPTSEVLKKCEQLGFSPGEIIAARGPFSAEMNYLMFRDYGIDAVVSKESGPEGGVPEKLEAARRLGIPVILIQRPPLVYPVVVNNMEDLLKEMGNDDGS
SIO_010081: TOCE_RS01640
subclass of: SO_0000673
so part of: TOCE_RS01640
location: 312622..313380
location: region:312622-313380:1
so has part: feature:312622-313380:1:exon

WP_013275149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312622-313380:1:exon

TOCE_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: hemA
locus tag: TOCE_RS01645
old locus tag: Toce_0319
so part of: sequence
location: 313370..314629
location: region:313370-314629:1
so has part: feature:313370-314629:1:exon
subclass of: SO_0000010

position:313370:1
position: 313370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314629:1
position: 314629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313370-314629:1:exon

TOCE_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: hemA
locus tag: TOCE_RS01645
old locus tag: Toce_0319
EC number: 1.2.1.70
inference: COORDINATES: protein motif:HMM:TIGR01035.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamyl-tRNA reductase
translation: MGLEEIVVTGIDHRVPVEIRERVAIKQRDLFDCLSRLKGTEGVREAVILSTCNRTEVYLVAEKEARNWAGDFLIGLSGAEKDELSQNLFTLSGKDAALHLFRVACGLESMVLGEDQILGQVREAWEKALEAGASGKILNRLFSDAVALGKKARFETRISDHPLSISYIAVKFVEDVLGGLSGRTAFVIGAGEMARIAIKYLIQKGIAHVSVSNRTHERALNLKREIPEITVVPYDQKYEKIASSDIVISATDAPHYTVDYDKFKAAYRGGRVCMVDLAVPRDIDPRIGSIPGVSLFTLDDLKMAAVENENQRRKLAAVIEEMAKAALEDYVKWYSCLAVVPVIKQLNKYVEGVCLAEFEKVNGKLPEMGDRERRHIKKALDRVGAKIAARYLSALKFLAENGKIDSDVVAAFQWGDTNG
SIO_010081: TOCE_RS01645
subclass of: SO_0000673
so part of: TOCE_RS01645
location: 313370..314629
location: region:313370-314629:1
so has part: feature:313370-314629:1:exon

WP_049817879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313370-314629:1:exon

TOCE_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: hemC
locus tag: TOCE_RS01650
old locus tag: Toce_0320
so part of: sequence
location: 314613..315512
location: region:314613-315512:1
so has part: feature:314613-315512:1:exon
subclass of: SO_0000010

position:314613:1
position: 314613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315512:1
position: 315512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314613-315512:1:exon

TOCE_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: hemC
locus tag: TOCE_RS01650
old locus tag: Toce_0320
EC number: 2.5.1.61
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777583.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydroxymethylbilane synthase
translation: MIPTGRIVRVGSRESRLALVQTEIVIRLLKDRRPELEFEVVKIKTQGDKLLDVNLSDAGGKGVFVKEIEEALLAGSIDLAVHSMKDVPYELPEGLCIAAVTEREDPRDVLISRDKRRLLNLRPGARIGTSSLRRSVQLKALRPDLDIVPVRGNVPTRIRKMDDLELDGLVLAAAGIKRLGLEELIAEYFPPEVIVPAVGQGALAVEARKDDDILELAGLVSHKATEVAVRAERSFMRALGGSCRVPLGAFARVEGTVVTLVGMVEKNGSVCKGTMSGKLKEAEEIGLRLAERLGDSSDR
SIO_010081: TOCE_RS01650
subclass of: SO_0000673
so part of: TOCE_RS01650
location: 314613..315512
location: region:314613-315512:1
so has part: feature:314613-315512:1:exon

WP_013275151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314613-315512:1:exon

TOCE_RS01655
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cobA
locus tag: TOCE_RS01655
old locus tag: Toce_0321
so part of: sequence
location: 315478..317058
location: region:315478-317058:1
so has part: feature:315478-317058:1:exon
subclass of: SO_0000010

position:315478:1
position: 315478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317058:1
position: 317058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315478-317058:1:exon

TOCE_RS01655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cobA
locus tag: TOCE_RS01655
old locus tag: Toce_0321
EC number: 2.1.1.107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777584.1
GO function: GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO process: GO:0019354 - siroheme biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uroporphyrinogen-III C-methyltransferase
translation: MQKGWVIAVTGKVYLIGAGPGDPGLLTLKAVRVLKKADAVLYDRLMNREILTLARKDAELIDVGKAPDNHPVPQHRINEILLEKALKGMTVVRLKGGDPFVFGRGSEEALYLTERGVPVEVVPGVTSAIAVPAYAGVPVTHRGISSSFHVITGSDGCGERADWDSLSRLKGTLIFLMGVKNLESIVSNLLKYGKPADTPAAMIMWGATPAQKTVTGTLADIVRRVKEAGIKNPAVFVVGGTVGLWEYLNWFEGKPLHGRRILVTGTIDAEKGQPEDGPFDFLEDAGAEVIHCPTVKIEFDYGETAGFLANAGDLNLLVFTSKNAVTAFAGAMRRMRLDLRRLGGATVAAVGRKTAERLEEVFIYPDLVPEEFTSKDLLEKIPAGGGGKRTAAVITSDIGGQELVGGLEARGYRVMKIAAYKNLPNYDVRERLIEELGKGVDAAVFTSPSSFYRMEQMVGKLPEKLKKVFIAAIGPTTAAAIEKTGLKVDVCPKEHTLEGLQKALLEKFVGRGEGDGGNKKAQEIEI
SIO_010081: TOCE_RS01655
subclass of: SO_0000673
so part of: TOCE_RS01655
location: 315478..317058
location: region:315478-317058:1
so has part: feature:315478-317058:1:exon

WP_245523136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315478-317058:1:exon

TOCE_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: hemB
locus tag: TOCE_RS01660
old locus tag: Toce_0322
so part of: sequence
location: 317021..317995
location: region:317021-317995:1
so has part: feature:317021-317995:1:exon
subclass of: SO_0000010

position:317021:1
position: 317021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317995:1
position: 317995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317021-317995:1:exon

TOCE_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: hemB
locus tag: TOCE_RS01660
old locus tag: Toce_0322
EC number: 4.2.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777585.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO process: GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: porphobilinogen synthase
translation: MEVIKRPRRLRYNTTVREMVRETCLDVKDLIYPLFVAHGENIKQEIDSMPGVYRYSIDRLPEEVKEIRELGIPAVLLFGVPASKDEFGSEAYSDDGIVQRAVRVIKEAEPSLVVITDVCLCAYTSHGHCGVVRNGRIENDETVKLIARTALSHVKAGADMVAPSDMMDGRVRGIRQLLDGEGFSHVPVMAYSAKYASSFYGPFREAAHSAPMFGDRRSYQMDPANSNEAMREIELDILEGADIIMVKPALAYLDVIRRAKDRFGVPLAAYNVSGEYSMIKAAASMGFLDEKTSVLEALTSIKRAGADLIITYHAKEVARWLTTR
SIO_010081: TOCE_RS01660
subclass of: SO_0000673
so part of: TOCE_RS01660
location: 317021..317995
location: region:317021-317995:1
so has part: feature:317021-317995:1:exon

WP_013275153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317021-317995:1:exon

TOCE_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: hemL
locus tag: TOCE_RS01665
old locus tag: Toce_0323
so part of: sequence
location: 317977..319851
location: region:317977-319851:1
so has part: feature:317977-319851:1:exon
subclass of: SO_0000010

position:317977:1
position: 317977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319851:1
position: 319851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317977-319851:1:exon

TOCE_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: hemL
locus tag: TOCE_RS01665
old locus tag: Toce_0323
EC number: 5.4.3.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015294923.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate-1-semialdehyde 2,1-aminomutase
translation: MAYYPVMLDLRNKKCLVVGAGAVAYRKIRSLLECGAAVTVIATKINKDIRELGEKGRIVILERCYSVGDLEGFFMAFAASDDPVVNRQVAEEAAQRGIPVNVADDPGLSSFIVPSVLRRGDLAVAVSSGGKSPLLSKVVREWLEGIVPEEVDDLIRDLERARAEAKAAKLTPEEKIRLYYSLIKGRGLFRGKGDKMKSSELFQRAKKVMPGGVNSPVRAFGAVGGDPVFIKRGFGSRVWDEDGNEYIDYVLSWGPLILGHSHPAVVEALKRQAELGTSFGACTELEVLLAEKIREAVPSMEVVRMVNSGTEATMSAIRLARGYTGRNLIVKFAGCYHGHSDSLLIRAGSGLITYGIPDSGGVPEDTARLTLVARYNDVDMLEEIFEEKGPDIAAVIVEPVAGNMGVVPPEEDFLRALRELPRKYGALLIFDEVITGFRVSYSGAQGYYGIEPDLTTLGKIIGGGLPVGVYGGREDIMRCVSPDGPVYQAGTLSGNPLAMAAGLTTLEVLSKNPGLYDELDRRAERLCSGFKEVMEDAGIPVTVNRVCSMMTVFFTGEKVRNYDTAVKSDTRLYAVFFREMLKQGVYLPPAQFEAFFLSAAHSDEDIKKTIEAAWNAAKNLKKNY
SIO_010081: TOCE_RS01665
subclass of: SO_0000673
so part of: TOCE_RS01665
location: 317977..319851
location: region:317977-319851:1
so has part: feature:317977-319851:1:exon

WP_013275154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317977-319851:1:exon

TOCE_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01675
old locus tag: Toce_0324
so part of: sequence
location: 320086..321876
location: region:320086-321876:1
so has part: feature:320086-321876:1:exon
subclass of: SO_0000010

position:320086:1
position: 320086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321876:1
position: 321876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320086-321876:1:exon

TOCE_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01675
old locus tag: Toce_0324
EC number: 1.-.-.-
inference: COORDINATES: protein motif:HMM:NF013739.2
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MSRKKPNIVPSEPGFTPYMPDNPTDEERYGLLRYSLERVGRLEDFDNILKVLGPPPDITTIASPGEFRGVKVGIIGGGLAGLSAAFELRKLGFDITVFEALEDRIGGRIYTYYFDEEKKYYGELGAMRFPVSHETTWHYINLFKLPTRPFVQTNENAFIYVKGVRVRNDAEGRNVMERIYPKFDLNGWERRTPWEDLIFYALETPLLRMLQEVRPETVDVRPIYSPAIVYWDYFDVRRVMEEAGLSQDAIYLLGSLSPAVGSFLYNGYIEFLTEVYPAVFNFLYEIIGGMARLPLAFYESLTSPNPKEYPGIPDRHLGRVTWRRGTWVDGIFRHGEDGRVTLRYKTRYTRDCLQEDFDYVVCAIPFSTLRIVKIDPPFRNRKMQAIKEVNYIEAQKTLFLCKFRFWELGGPGERIVGGASYTDLPIQQIRYPSDHARCNSKWKERVRRGFFVSPADSWDMRHGYSPDEPGVLLASYNLTLDAARLGNIPDDVAFEIIKRQVEEVHGLPKGYLDPVVVDFARISWGRQPTFLGGFCYYFPEQKRIFSWASALPEYDGRVYFAGEHISGTHGWANGALKTGMEAANGIARSAKAAKIY
SIO_010081: TOCE_RS01675
subclass of: SO_0000673
so part of: TOCE_RS01675
location: 320086..321876
location: region:320086-321876:1
so has part: feature:320086-321876:1:exon

WP_013275155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320086-321876:1:exon

TOCE_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01680
old locus tag: Toce_0325
so part of: sequence
location: 321949..322656
location: region:321949-322656:1
so has part: feature:321949-322656:1:exon
subclass of: SO_0000010

position:321949:1
position: 321949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322656:1
position: 322656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321949-322656:1:exon

TOCE_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01680
old locus tag: Toce_0325
inference: COORDINATES: protein motif:HMM:NF019322.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MLDKKSPIPAYFRLKQIIRDEIKRHDLKPGDPLPSEREYCERFGLSRMTVRQALKELELEGVIVREKGRGSFVAIPWIEQEGLMSFTEMVRSRGMTPRTEVVEFDRLPAGELKAFLGIDLKEEVYRVARLRKADGVPVAVETVYIPVLLVPDFEKIDLSGSLYELLSTRYGIEVRSSRTSFSAVLSTPDLEALLMLEETVPLLKVESVYFHTKPVFYEVSYYKSDQFKITVNLNR
SIO_010081: TOCE_RS01680
subclass of: SO_0000673
so part of: TOCE_RS01680
location: 321949..322656
location: region:321949-322656:1
so has part: feature:321949-322656:1:exon

WP_013275156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321949-322656:1:exon

TOCE_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: nagB
locus tag: TOCE_RS01685
old locus tag: Toce_0326
so part of: sequence
location: 322675..323406
location: region:322675-323406:1
so has part: feature:322675-323406:1:exon
subclass of: SO_0000010

position:322675:1
position: 322675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323406:1
position: 323406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322675-323406:1:exon

TOCE_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: nagB
locus tag: TOCE_RS01685
old locus tag: Toce_0326
EC number: 3.5.99.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777588.1
GO function: GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA]
GO process: GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucosamine-6-phosphate deaminase
translation: MKIIVAGDYQEMSRIAANIIAEEIKKKPDLVLGLATGSTPLGTYRELVRMYKEGKLDFSRVITFNLDEYYGLSPDDKRSYHYYMYRNFFDHVNVRPENIHIPDGTARDVEEECLRYDEEIKKCGGIDLQLLGIGVNGHIGFNEPGDELLTATHLTDLAPDTLAANARFFGSIDEVPRKAITVGLGTIIQAKKILLLASGPEKAAIMAELLDDDAVSTRVPASFLLLHRDVTVVMDKDAAAKKR
SIO_010081: TOCE_RS01685
subclass of: SO_0000673
so part of: TOCE_RS01685
location: 322675..323406
location: region:322675-323406:1
so has part: feature:322675-323406:1:exon

WP_013275157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322675-323406:1:exon

TOCE_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: nagA
locus tag: TOCE_RS01690
old locus tag: Toce_0327
so part of: sequence
location: 323453..324628
location: region:323453-324628:1
so has part: feature:323453-324628:1:exon
subclass of: SO_0000010

position:323453:1
position: 323453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324628:1
position: 324628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323453-324628:1:exon

TOCE_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: nagA
locus tag: TOCE_RS01690
old locus tag: Toce_0327
EC number: 3.5.1.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777589.1
GO function: GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO process: GO:0006040 - amino sugar metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetylglucosamine-6-phosphate deacetylase
translation: MKVLIKNARVITPFEVLDDHWVLVRDGSIAEVKKGREPGENFDLVVDAGGNYLSPGFIDIHNHGSYGRDFMEATPGALETIAEFHLKNGVTGFLATVLTAPFEEMKRAIKNAAGFIKIQGPDKARAKLLGIYVEGPYFSTAKRGAQPAEYIRKPDTAELDELLRLSENSIRVVALAPEAAGAEDAISFLRERGIVAAMGHTNATYDEAKRGIDLGVTLVTHTFNGMRGFDHREPGAAGAALTDERVYCEVICDGIHLHPAAVRLILRAKGKDRIVLVSDAMMACGLSDGEYTLAGQKVIVRNGEARLQDGTLAGSTLTLDRAVRYMVRTIGVSLCEAVRMASLNPAGAIGLSQKKGSIEVGKDADMIIFDDEIRVKWAMVEGVPFSFSEKI
SIO_010081: TOCE_RS01690
subclass of: SO_0000673
so part of: TOCE_RS01690
location: 323453..324628
location: region:323453-324628:1
so has part: feature:323453-324628:1:exon

WP_013275158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323453-324628:1:exon

TOCE_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01695
old locus tag: Toce_0328
so part of: sequence
location: complement(324647..325600)
location: region:324647-325600:-1
so has part: feature:324647-325600:-1:exon
subclass of: SO_0000010

position:324647:-1
position: 324647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325600:-1
position: 325600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324647-325600:-1:exon

TOCE_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01695
old locus tag: Toce_0328
inference: COORDINATES: protein motif:HMM:NF013088.2
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MNLDKVKGYLAGVGFSSIFGFSFMFTKNALERVDPFRFIGFRFALAAFTIGLLAATGVIKFSLRGKSLAPLLAVAFLQPVCYFTFETMGVNLTSSSQAGMMMALIPIFVAILSALVLKERPSLAQAFFIILSVTGVIIIAAFQGVNGGGANLHGLLFLTGAVLSAAFYNIASRRFSTKYTPFEVTFVMMWVGALFFNTVAFILHLKSGNPGTFLAPLTDGRVLVSLFYLGIGSSVIAFFLVNYSLSRLSASQSAVFSNLTTVISILAGVAFRGEPFFWYHAAGALMILAGVWGTNYFSRSPEQTKKSPGFGESSSIE
SIO_010081: TOCE_RS01695
subclass of: SO_0000673
so part of: TOCE_RS01695
location: complement(324647..325600)
location: region:324647-325600:-1
so has part: feature:324647-325600:-1:exon

WP_013275159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324647-325600:-1:exon

TOCE_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01700
old locus tag: Toce_0329
so part of: sequence
location: 325832..326200
location: region:325832-326200:1
so has part: feature:325832-326200:1:exon
subclass of: SO_0000010

position:325832:1
position: 325832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326200:1
position: 326200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325832-326200:1:exon

TOCE_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01700
old locus tag: Toce_0329
inference: COORDINATES: protein motif:HMM:NF015898.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BlaI/MecI/CopY family transcriptional regulator
translation: MKKLQRISDAEKQIMEYIWKAGRPVTTSEIMRNLPEDKAWKQNTVVTFLTRLMKKGILKATRIGKANYYEPCVTEQEYRNFVTKQFINDVHKGSVLGFITALCDNGDLTKEDIESILKRLKE
SIO_010081: TOCE_RS01700
subclass of: SO_0000673
so part of: TOCE_RS01700
location: 325832..326200
location: region:325832-326200:1
so has part: feature:325832-326200:1:exon

WP_013275160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325832-326200:1:exon

TOCE_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01705
old locus tag: Toce_0330
so part of: sequence
location: 326213..327559
location: region:326213-327559:1
so has part: feature:326213-327559:1:exon
subclass of: SO_0000010

position:326213:1
position: 326213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327559:1
position: 327559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326213-327559:1:exon

TOCE_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01705
old locus tag: Toce_0330
inference: COORDINATES: protein motif:HMM:NF017390.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M56 family metallopeptidase
translation: MNDIYNQLFIMSVVAGGIYLILKVLSAVTLKYFSAAWHYYTNIAVYMFFLLPYHRWMSGLDLSFLKMSDKGFELPSITGLNPLTALNFAAGGISQQKGYAGASVYFEILPYILMAGTLIFMVVILVHNYNLNRRIFRICRLTDDMQILEVLFKCKQQMGITRQIPVYISPCITTPFLYGIIKPRIVLPDIKLSADELQCVFLHELTHWKRRDGWLKFLMLFINAIHWFNPLAYAARFDIDRFCELSCDESVVKSMSNRERRRYCELMLSVLWNVADQSAKLFSAFSGKRKQLERRVDIILKDKVPMSKKWVRMVATAITLAIVLLGAILAGAVETSALERKGSSESALPKPKEISNYQYRVNEYGETYGPAIYAEVLGEEPDLIAAIGIDGTFGYVRSSDLNPPDPRTPEEAVAQNNLGDKLIPLYDKDGRTVIGQFKIVSGRFEKLK
SIO_010081: TOCE_RS01705
subclass of: SO_0000673
so part of: TOCE_RS01705
location: 326213..327559
location: region:326213-327559:1
so has part: feature:326213-327559:1:exon

WP_013275161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326213-327559:1:exon

TOCE_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01710
old locus tag: Toce_0331
so part of: sequence
location: 327846..328577
location: region:327846-328577:1
so has part: feature:327846-328577:1:exon
subclass of: SO_0000010

position:327846:1
position: 327846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328577:1
position: 328577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327846-328577:1:exon

TOCE_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01710
old locus tag: Toce_0331
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQRIISIATLICLILTTLISSVQAAPIDGDLIPIEEYIKAYSENDPKLIKQISSNEYIIDKSITKTDFTRLEVAPGSKIYFLKKHQNNSNPSILSASHVCPELTFTYKTDIVDVGSQTCQVAAWSGIGFFGTPVAAKWCGMGASDILTEPSGSYENHLMVKSYCYGVGLDFSYGQGLSPGFTLISGSSIQYDEFRENLRFHDAKYHYAYAAGVLTSCGTSTRAGLFYDGSYDYIETYINWYTD
SIO_010081: TOCE_RS01710
subclass of: SO_0000673
so part of: TOCE_RS01710
location: 327846..328577
location: region:327846-328577:1
so has part: feature:327846-328577:1:exon

WP_013275162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327846-328577:1:exon

TOCE_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01715
old locus tag: Toce_0332
so part of: sequence
location: 328676..330691
location: region:328676-330691:1
so has part: feature:328676-330691:1:exon
subclass of: SO_0000010

position:328676:1
position: 328676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330691:1
position: 330691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328676-330691:1:exon

TOCE_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01715
old locus tag: Toce_0332
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: prenyltransferase/squalene oxidase repeat-containing protein
translation: MKRILSLFFVFLIIFFTVSCDNLTRITWEENTKKKIYASQNNDGGFKEHFLIQDRDLSSTYYFLEICDMINIPLNKDFKEKTIQWILSIKTKAGYFGSESQYSRQIQNTFFAILSLKRLGFEFDENLKQEIKNLFVRLKKPDNLYYEHSAEKEPFLNYFVLESVKAIENEEKFLDVKTQFKKLCLTSTSMNTLTKLFFLRYFDEPVKIDENIRQQLTSEMEQGKSSFIEKLWFLSFFEDDRLNSVIKTTLLKYKNLDGGFSAVVEDSSTDRETYYAVSALRRLNYKITGPEKNELVNFIFAHMNPAGGFNKPFISPSTPQATYKCLYILTELGYEVKNANIVEQYLNRTLKALLGSPDYHPLVMLNTLKALQILDKDRNLKSTLKDSNQHLYEDFLQNTYKNLEEKLNRDNFEQELYDVSNYVEILIMLGEEIPETLKQKIYINAEKVIGDSLKANSIVSIVPLYYSVKLIDNINIISSYNEQVDSFAKKLINQELNKAEKGDLLITYYAMMIQKYNHVLEEPLFCSYDYLNLFKSDEGGVRQNFESPPSLSLTEKYMQMYSFIKNYSVRTSSRAIEASYNGKKGLSVSGYKLRRLKDFDLILLKLYNNEHGHWNEYYITDGKNKILAKAKVSQTPEYNDILVFEIPKGKVNERLYFYFSGKGRTEIPRFW
SIO_010081: TOCE_RS01715
subclass of: SO_0000673
so part of: TOCE_RS01715
location: 328676..330691
location: region:328676-330691:1
so has part: feature:328676-330691:1:exon

WP_013275163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328676-330691:1:exon

TOCE_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01720
old locus tag: Toce_0333
so part of: sequence
location: 331286..331846
location: region:331286-331846:1
so has part: feature:331286-331846:1:exon
subclass of: SO_0000010

position:331286:1
position: 331286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331846:1
position: 331846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331286-331846:1:exon

TOCE_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01720
old locus tag: Toce_0333
inference: COORDINATES: protein motif:HMM:NF024304.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxamine 5'-phosphate oxidase family protein
translation: MRRKDREMNREFGLKVIDKSIYGVLSMVDEGEPYGIPLSIVRDGNTLYFHSAKDGRKVKILEKNPKVSVVFVGETKIPEIYSNEELDEIAKDESKANALISKVFTTEFESAVVVGKVKLVEDEDEKIKALKLICEKYTPTKMAYFPIAIKAGLNRTNVDSIEIEEITAKRKKFDANGEELKWGRTE
SIO_010081: TOCE_RS01720
subclass of: SO_0000673
so part of: TOCE_RS01720
location: 331286..331846
location: region:331286-331846:1
so has part: feature:331286-331846:1:exon

WP_013275164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331286-331846:1:exon

TOCE_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01725
old locus tag: Toce_0334
pseudo: true
so part of: sequence
location: 332008..>333360
location: region:332008-333360:1
so has part: feature:332008-333360:1:exon
subclass of: SO_0000010

position:332008:1
position: 332008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333360:1
position: 333360
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332008-333360:1:exon

TOCE_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01725
old locus tag: Toce_0334
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012008915.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1182 family transposase
SIO_010081: TOCE_RS01725
subclass of: SO_0000673
so part of: TOCE_RS01725
location: 332008..>333360
location: region:332008-333360:1
so has part: feature:332008-333360:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332008-333360:1:exon

TOCE_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cooS
locus tag: TOCE_RS01730
old locus tag: Toce_0335
so part of: sequence
location: complement(333539..335410)
location: region:333539-335410:-1
so has part: feature:333539-335410:-1:exon
subclass of: SO_0000010

position:333539:-1
position: 333539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335410:-1
position: 335410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333539-335410:-1:exon

TOCE_RS01730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cooS
locus tag: TOCE_RS01730
old locus tag: Toce_0335
EC number: 1.2.7.4
inference: COORDINATES: protein motif:HMM:TIGR01702.1
GO function: GO:0018492 - carbon-monoxide dehydrogenase (acceptor) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anaerobic carbon-monoxide dehydrogenase catalytic subunit
translation: MEMCTSADKKLIDFMRSKFEVETSFNRVSSQAVKCGFGMQGVCCRLCTNGPCRITPQSPKGVCGATADTIVARNFLRSVAAGAACYLHILENTAKNLRALGQGKNGLTIKGPETLRELAEMFEIEETDPAQQAVKIAERVLEDLYLPREQQMTLVEKLAYRSRFQRWKELNILPGGAKSEVFDAIVKTSTNLSSDPVDMLLHALKLGIATGLYGLTLTNYLNDIMLGEPQITTAKVGFSVVDPDYINIMVTGHQHSLIGVLQDKIVTPEADALASKNGAKGFKIVGCTCVGQDMQQRGAHYRKAFAGHVGNNFTSEALLATGGIDLVVSDFNCTVPGIETICEQFQVAQICLDDVAKKSNADFIRFDSSEAADIAEKIMHAALESYTRRRGKVQVDIPDHGCDDAVTGLSKKSLKSFLGGNFKPLIDLIASGKIRGVAAVVGCSNLTAKGHDVFTVELTKELIKRDIIVLSAGCTSGGLENVGLTSPGAAELAGDNLKEVCRTLGIPPVLNFGPCLAIGRLETVAAELAQALDIDIPELPLVLSAPQWLEEQALADASFGLALGLPIHVAIPPFVTGSQLVSKVLTEDVEQLTGGKVIVEGEIVPAAEKLADIIEQKRKALLS
SIO_010081: TOCE_RS01730
subclass of: SO_0000673
so part of: TOCE_RS01730
location: complement(333539..335410)
location: region:333539-335410:-1
so has part: feature:333539-335410:-1:exon

WP_013275166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333539-335410:-1:exon

TOCE_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01735
old locus tag: Toce_0336
so part of: sequence
location: complement(335662..336069)
location: region:335662-336069:-1
so has part: feature:335662-336069:-1:exon
subclass of: SO_0000010

position:335662:-1
position: 335662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336069:-1
position: 336069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335662-336069:-1:exon

TOCE_RS01735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01735
old locus tag: Toce_0336
inference: COORDINATES: protein motif:HMM:NF014173.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rrf2 family transcriptional regulator
translation: MKLNQATDYAFRAVLHLSKLPPGEVVEARVIAEQEHIPMRFMLKILRLLTQAGIVKSYRGVGGGYALAKMPRDITMRDVVEAVEGPVYINRCLIAPEECNKRSTAKCSIHKALFSIQQTINDKLEEYNFEILSKN
SIO_010081: TOCE_RS01735
subclass of: SO_0000673
so part of: TOCE_RS01735
location: complement(335662..336069)
location: region:335662-336069:-1
so has part: feature:335662-336069:-1:exon

WP_013275167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335662-336069:-1:exon

TOCE_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01740
old locus tag: Toce_0337
so part of: sequence
location: 336280..337122
location: region:336280-337122:1
so has part: feature:336280-337122:1:exon
subclass of: SO_0000010

position:336280:1
position: 336280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337122:1
position: 337122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336280-337122:1:exon

TOCE_RS01740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01740
old locus tag: Toce_0337
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778786.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MurR/RpiR family transcriptional regulator
translation: MPGSLEKIAAILNGLKPSEKKIAQYILENPQEISDLPIAELAKRCGTSEASVVRFCRTLGYKGYQDLKIKISADLAIKTKKIQGLVSVDDDVDAIITKVSRNNMLAVENTMDILDRNEVRKAAEVLLRAKKIDFYGVGASGIVAQDAMHKFMRINKACTAYTDTHMQLTSAANLSPEDVAVGISYSGQTVDTVDALKLAKNAGATTICITKFGHSPITKVSDIKLFVTSSEALFRSGAMASRMAQLNVIDILFTIVACRKYDDIINYLENTSEAVASRKY
SIO_010081: TOCE_RS01740
subclass of: SO_0000673
so part of: TOCE_RS01740
location: 336280..337122
location: region:336280-337122:1
so has part: feature:336280-337122:1:exon

WP_013275168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336280-337122:1:exon

TOCE_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01745
old locus tag: Toce_0338
so part of: sequence
location: 337203..337511
location: region:337203-337511:1
so has part: feature:337203-337511:1:exon
subclass of: SO_0000010

position:337203:1
position: 337203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337511:1
position: 337511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337203-337511:1:exon

TOCE_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01745
old locus tag: Toce_0338
EC number: 2.7.1.-
inference: COORDINATES: protein motif:HMM:NF014368.2
GO function: GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS sugar transporter subunit IIB
translation: MKILLVCSGGMSTSIVLKAVEKKAAELKEDVYVEAASTTQFEERVKDFDVVLIAPQVRHRKQFFEEIASKHGIPTGLIEPQAYGPFGGEKILRQAKKLLEEV
SIO_010081: TOCE_RS01745
subclass of: SO_0000673
so part of: TOCE_RS01745
location: 337203..337511
location: region:337203-337511:1
so has part: feature:337203-337511:1:exon

WP_013275169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337203-337511:1:exon

TOCE_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01750
old locus tag: Toce_0339
so part of: sequence
location: 337515..338765
location: region:337515-338765:1
so has part: feature:337515-338765:1:exon
subclass of: SO_0000010

position:337515:1
position: 337515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338765:1
position: 338765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337515-338765:1:exon

TOCE_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01750
old locus tag: Toce_0339
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001032272.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS sugar transporter subunit IIC
translation: MEFFLKWVEEKLMPPMAKLAEQRHLRAVRDGIVATLPLIIVGSFFLIVASPPIPALAEKIQPYASQILIPFRLSVGLMALYAAHGIGYSLAKSYNLDPVAGGLLALASFIMITLPQNVEKIGFVLPMGGLGGAGLFAAIIMAFFAVEVLRFLTVRKITIKMPEGVPESVARSFEALIPAAAIMVIIYIVRVMLNINIQELIMNLFKPLVTAGDSLIGVLVPVILITLLWSAGIHGVSVVGSIARPIWMALLDENTQAAAAGAKILPHIAPEPFFQWFIWIGGSGATLSLVLLMLTSKSRYLKNLGKASLLPGVCNINEPVIFGAPIMLNPILAIPFIIGPVITAVISYIAMVFNLVGRPYVLAPWTLPAPIGAYLATGGDWRAVVLVLVNIALTTIIYYPFFKVYERKMMEEETES
SIO_010081: TOCE_RS01750
subclass of: SO_0000673
so part of: TOCE_RS01750
location: 337515..338765
location: region:337515-338765:1
so has part: feature:337515-338765:1:exon

WP_013275170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337515-338765:1:exon

TOCE_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01755
old locus tag: Toce_0340
so part of: sequence
location: 338813..339178
location: region:338813-339178:1
so has part: feature:338813-339178:1:exon
subclass of: SO_0000010

position:338813:1
position: 338813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339178:1
position: 339178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338813-339178:1:exon

TOCE_RS01755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01755
old locus tag: Toce_0340
inference: COORDINATES: protein motif:HMM:NF014326.2
GO function: GO:0016740 - transferase activity [Evidence IEA]
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS lactose/cellobiose transporter subunit IIA
translation: MVDENSIFEMIAYGGNARAKAYEAAARARKGDFELAEKLLKEADEEMLKAHHVQTRLIHEEVQGKKHEVSVLLVHAQDHLMTAMAERSLIENMIDLFRRVRELEVEVSALKGCLGNEKIDS
SIO_010081: TOCE_RS01755
subclass of: SO_0000673
so part of: TOCE_RS01755
location: 338813..339178
location: region:338813-339178:1
so has part: feature:338813-339178:1:exon

WP_013275171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338813-339178:1:exon

TOCE_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: chbG
locus tag: TOCE_RS01760
old locus tag: Toce_0341
so part of: sequence
location: 339159..339929
location: region:339159-339929:1
so has part: feature:339159-339929:1:exon
subclass of: SO_0000010

position:339159:1
position: 339159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339929:1
position: 339929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339159-339929:1:exon

TOCE_RS01760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: chbG
locus tag: TOCE_RS01760
old locus tag: Toce_0341
EC number: 3.5.1.105
inference: COORDINATES: protein motif:HMM:NF002559.0
GO function: GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
GO process: GO:0000272 - polysaccharide catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chitin disaccharide deacetylase
translation: MKKLIVNADDFGLTPGINRAVKQGVIEGIITDTTLMVNMPAAREAMDIAMECFPDRVGIHLNLTCGRPVLDPAEVPSLVDKSGRFYRRRAALMERATLRDIEKELRAQVDKFLRSGLKPSHLDCHHHLHLHPMVAEIVAELALELNVPVRAVDSQTRAFFKSRGVITPDQFSVDFYGEGASYQNLVSILDSYSYGVMEIMTHPGYCDQELLEISTYTHFREKELEILTNPFLRGVLEEKDIVLVSFNDLKTEKGSL
SIO_010081: TOCE_RS01760
subclass of: SO_0000673
so part of: TOCE_RS01760
location: 339159..339929
location: region:339159-339929:1
so has part: feature:339159-339929:1:exon

WP_013275172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339159-339929:1:exon

TOCE_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01765
old locus tag: Toce_0342
so part of: sequence
location: 339926..340882
location: region:339926-340882:1
so has part: feature:339926-340882:1:exon
subclass of: SO_0000010

position:339926:1
position: 339926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340882:1
position: 340882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339926-340882:1:exon

TOCE_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01765
old locus tag: Toce_0342
inference: COORDINATES: protein motif:HMM:NF013986.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BadF/BadG/BcrA/BcrD ATPase family protein
translation: MSYIIGVDAGGSKIEVLALDLERHSANTLIIERSGNAMSAGEDKALYNIKEAVEKVSAPVEKTGSRCLGIYVGAAGAGSKEIRRKIREVLTGLALTDAVFVDSDYRIALAGAAGRPYGVVVIAGTGSVVYGVNEAGSEVILGGWGHLIGDEGSGYYIGRRAIREAVKFYEGRGGSKRIYEEVLAHFSVKDLTEIKPILYSGGFSKDIIAGLTVRVSKLCDEGERIARQILEEAGTALSELVSCALKRFVYISDVIVSGSILLKEKLVYDTFAFELKRTCPKVKIRRPRYRATAGALILLAGELGIELDSNLLPGAETL
SIO_010081: TOCE_RS01765
subclass of: SO_0000673
so part of: TOCE_RS01765
location: 339926..340882
location: region:339926-340882:1
so has part: feature:339926-340882:1:exon

WP_013275173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339926-340882:1:exon

TOCE_RS01770
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01770
old locus tag: Toce_0343
so part of: sequence
location: 340894..342057
location: region:340894-342057:1
so has part: feature:340894-342057:1:exon
subclass of: SO_0000010

position:340894:1
position: 340894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342057:1
position: 342057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340894-342057:1:exon

TOCE_RS01770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01770
old locus tag: Toce_0343
EC number: 2.7.1.170
inference: COORDINATES: protein motif:HMM:NF007151.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anhydro-N-acetylmuramic acid kinase
translation: MERLYALYKKKKKKVIGLMSGTSADGIDAALVEIEGYGPETRAELLVFCNFPYDEPTRREIFHLFDVSRSTVDLVCRMNFKLGRLFGNAAIRLCELAGVDISDVDLIGSHGQTVYHIPGEATLQIGEPCVIAEITGRTVVADFRVRDVAAGGHGAPLVPYAEYLLYRSDEVNRALLNIGGIANITVLPKSCSVEDITAFDTGPGNMVIDEIVLRGTGGSMKFDKDGAVASKGKVDERLIEFLKAHPYLKQRPPKTAGREIFGGGFVEEIIRKSLDLRIGFEDLVATVTYFTAYSIARACRDFLMPNHRIDEILISGGGAYNKTLVDMIRKELKGVEIRTFEDIGLNSDAKEAVAFAVLANETIGGVCNNVPGATGAGKRVILGKIII
SIO_010081: TOCE_RS01770
subclass of: SO_0000673
so part of: TOCE_RS01770
location: 340894..342057
location: region:340894-342057:1
so has part: feature:340894-342057:1:exon

WP_013275174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340894-342057:1:exon

TOCE_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: murQ
locus tag: TOCE_RS01775
old locus tag: Toce_0344
so part of: sequence
location: 342080..343006
location: region:342080-343006:1
so has part: feature:342080-343006:1:exon
subclass of: SO_0000010

position:342080:1
position: 342080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343006:1
position: 343006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342080-343006:1:exon

TOCE_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: murQ
locus tag: TOCE_RS01775
old locus tag: Toce_0344
EC number: 4.2.1.126
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778779.1
GO function: GO:0016835 - carbon-oxygen lyase activity [Evidence IEA]
GO process: GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009254 - peptidoglycan turnover [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetylmuramic acid 6-phosphate etherase
translation: MELTKLITEQRNPYTEDIDILDTVSMLKKMNDEDKKVAFAVEKEIPRIATAVDLITNRLKNGGRLIYIGAGTSGRLGILDASECPPTFGVDPELVQGVIAGGDSAIKKAVEGAEDDEYMGRKDLQDRRLSDRDVVAGLTASGRTPYVIGGLKYAREVGALTIGICCNPESPLRDFTDILIAPVVGPEVILGSTRLKAGTAQKMVLNMISTGVMIRLGKVYSNLMVDLQATNKKLQQRARRIVKLATGVDDERIDAVLSKTEYNVKLSIFMILSGMDGEKAKKILTFHGGNIRKALESIEGVKGVESCG
SIO_010081: TOCE_RS01775
subclass of: SO_0000673
so part of: TOCE_RS01775
location: 342080..343006
location: region:342080-343006:1
so has part: feature:342080-343006:1:exon

WP_013275175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342080-343006:1:exon

TOCE_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01780
old locus tag: Toce_0345
so part of: sequence
location: 342999..344309
location: region:342999-344309:1
so has part: feature:342999-344309:1:exon
subclass of: SO_0000010

position:342999:1
position: 342999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344309:1
position: 344309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342999-344309:1:exon

TOCE_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01780
old locus tag: Toce_0345
EC number: 3.2.1.86
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013779234.1
GO function: GO:0008706 - 6-phospho-beta-glucosidase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-phospho-beta-glucosidase
translation: MVKKLKIAVIGGGSSYTPELIEGFIKRAPELPVSEIYLVDVEQGREKLEIVGNLAKRMLDKAGLNISVHLTLDRREAISNADFVITQFRVGGIDARIRDEKIPLKYGVIGQETTGPGGFAKALRTIPVILDICRDIEELAPDAWLINFTNPSGIITETVIKHTGVKVLGLCNVPVNMVNYVAKAYGVEMDRVYIQFAGLNHLVWGLRVYLDGEDITQKLIEQLASDENMTMKNIPGMQWDKDLLKSLGVLPCPYHRYYYMKDTMLEEEKRKATHEGTRGEVVKKVERELFELYKDPKLDEKPPQLEKRGGALYSYTACNLISSIVNDKRDIQVVNVKNSGAILDLPEDAVVETNCVIDKNGAHSLSVGRLPAKIRGLIQVVKAYEELTIEAGVNGDYNAALQALTIHPLVPSAGIAKKILDDILAENREYLPQFFK
SIO_010081: TOCE_RS01780
subclass of: SO_0000673
so part of: TOCE_RS01780
location: 342999..344309
location: region:342999-344309:1
so has part: feature:342999-344309:1:exon

WP_041423825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342999-344309:1:exon

TOCE_RS01785
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01785
old locus tag: Toce_0346
so part of: sequence
location: 344517..345047
location: region:344517-345047:1
so has part: feature:344517-345047:1:exon
subclass of: SO_0000010

position:344517:1
position: 344517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345047:1
position: 345047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344517-345047:1:exon

TOCE_RS01785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01785
old locus tag: Toce_0346
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008665086.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GrpB family protein
translation: MRKVVVTDYNPMWPAMFEAEAAKIKEIFGDELIAIHHIGSTSVPEMKAKPIIDIMPLVRDINAVDKFNDKMIELGYEPMGEFGLPGRRYFRKGGDNRTHHVHIYQFDNKAEVERHLAFRDYLREHKDAAERYGKLKEELAKRFPDDIEAYMDGKDQFVKELEQKALKWYGEKLERN
SIO_010081: TOCE_RS01785
subclass of: SO_0000673
so part of: TOCE_RS01785
location: 344517..345047
location: region:344517-345047:1
so has part: feature:344517-345047:1:exon

WP_013275177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344517-345047:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 555079
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00174
inference: COORDINATES: profile:INFERNAL:1.1.4
note: cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: adenosylcobalamin
so part of: sequence
location: 345140..345258
location: region:345140-345258:1
so has part: feature:345140-345258:1:region

position:345140:1
position: 345140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345258:1
position: 345258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345140-345258:1:region

TOCE_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01790
old locus tag: Toce_0347
so part of: sequence
location: 345500..348913
location: region:345500-348913:1
so has part: feature:345500-348913:1:exon
subclass of: SO_0000010

position:345500:1
position: 345500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348913:1
position: 348913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345500-348913:1:exon

TOCE_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01790
old locus tag: Toce_0347
inference: COORDINATES: protein motif:HMM:NF025833.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-layer homology domain-containing protein
translation: MHYKIKKRLVALILVFGLLLSISIDGQVLTTALAASGSYTADQLAEKAVEFINSKFKSGEKVDGYTAYVLALAGEDLSSEKWTRNDLSLKEEIQKSADLLGNQNSLITYILATQNVDGSFGPYANEYGTKASLQALAMVKGDLPEGDISKQVQEAINKAIDYFKGRYMKGSLAYDAQGFNFDYRCVEALADASEDLSGWVYGDKSLKNIVIESAEAAADDAAVLDAVYLAKELTALYAVEPQSDKIATLAQAIADKKNTDGDSIWFGNSIYDDVMVLTALGKADKLSLIDRQKAFNYLEKFKHEHKDAWGKPAGAAWGDFEDEEPDLTAQVITALSYFEEARDTGSDVYKAIEEGLAYLKDIQDADTAAIKARFDNTFATAETLIALKSLGKKYEDYAGAGSGWVKRSGTKTIAQHLLALSRMGDEDRVNRLVNLLTERHSSNGFDNSVYTDFWAYIALGEAGKIKEINAEEAKSYILGKQSDEGSWGEKWGDAFYPDFMSTAQAIRALTYLSASGDTKVQNAIEKGLAYLKRQLQPDGSVYITQPFPDDPVVDTAEVIVTLKKLGVDPKEWKSGQGLTPVDYMMQKALNSDGSFGSVKNILGAAEALHAFILLKGETGSPGSEPGSSEPVPGEVECTVDIAVVGRDGELLFGPDSVTVSRNGRWGLTALGALDATGLDYECDGGFVKSIEGQANQGMNGWMYKVNGKVPSVAASEKAIGDGDEIIWWYSTDYRSSGPTWEDLINKNTVPEQEGVVSEDLEEQNERLPETLRVSKEALKALENVEELLELQKAAGIEEIDKAVVVIGSRGPFKRDEFLKLKEKLLQNRVDLQKEVAASEGAAIVDGKEEVALLVPAGALKKDLEISIKETDGTIPPGFKALSGIYEIAPEATSLSMPATLAIRAAVSPLVKPENLVLARYDDTEGRWVVIPAVADMAKGVIVARIEHFSKVAVFAKEVRKSFADVSDASFGWAKDAVEALAGSGIVTGVYGTFFEPGRALTRAEFVTMIVKTLGLEPKAGEGRQFKDVKKGAWYEKAVYAAVDAGLVTGYEDGTFRPDGKITREQLAVILARAVGFTPSGENPDFKDGKSISPWSRGSVAAAVAGELLEGFEDGTFRPKAAVSRAQAAVVIYRFLGE
SIO_010081: TOCE_RS01790
subclass of: SO_0000673
so part of: TOCE_RS01790
location: 345500..348913
location: region:345500-348913:1
so has part: feature:345500-348913:1:exon

WP_013275178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345500-348913:1:exon

TOCE_RS01795
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01795
old locus tag: Toce_0348
so part of: sequence
location: 348989..349849
location: region:348989-349849:1
so has part: feature:348989-349849:1:exon
subclass of: SO_0000010

position:348989:1
position: 348989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349849:1
position: 349849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348989-349849:1:exon

TOCE_RS01795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01795
old locus tag: Toce_0348
inference: COORDINATES: protein motif:HMM:NF025833.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4430 domain-containing protein
translation: MKKRTVKLAIMAFLLAVAVGCVIYAPKIFYDTKERPLTAVKENQALVPGEANTNPTKAGTGEAPNASIEGLAVQKDGVLTNTSPKLETGTGSGGTKVEKKVIEKAEPSDGSSKTKKEETSGTKKEPFGKGAASTGGAASSSRDDAPRHVPEKKDTDSSGDSTKETDSSSAGAGGCRIEIAIVGKGGRVLYGPKTVTVKENNRWGLTALGALDSTGIDYKTGQGYDGFVVSIAGETNKGMAGWMYSVNDEVPMAAASEKKIEPGDRIIWWYNESINNPPPTWDSLAE
SIO_010081: TOCE_RS01795
subclass of: SO_0000673
so part of: TOCE_RS01795
location: 348989..349849
location: region:348989-349849:1
so has part: feature:348989-349849:1:exon

WP_187286580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348989-349849:1:exon

TOCE_RS01800
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01800
old locus tag: Toce_0349
so part of: sequence
location: 349862..350791
location: region:349862-350791:1
so has part: feature:349862-350791:1:exon
subclass of: SO_0000010

position:349862:1
position: 349862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350791:1
position: 350791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349862-350791:1:exon

TOCE_RS01800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01800
old locus tag: Toce_0349
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: energy-coupling factor transporter transmembrane component T
translation: MLDRFFYREKGLFLQSLHPLSALVYIAVLLTLALMFNHPLYLLGLLSITVAAVKAVDGFDAWKTFLKVSLGATFVIIIVNAVTVRAGQTVLWRGPYIPVFGRLNVSLEAVLFGAVMGLRLLLIMSIFCLYNFMIHPDRVLDMLSRFSSKSGLVLSLAARMFPAMVSRLDGIREVLTARGVDFNAGTLKEKMAKYAVLMKILLLTSLEDSMETAQAMYARAFGSGRRSYYVRENLRPRDTACLAASLAALATAAYGLEKGLGTFRFYPQSGNLIDGHTGIGLLFAVIFLLCFPILLSWGWHTCPFLKSKI
SIO_010081: TOCE_RS01800
subclass of: SO_0000673
so part of: TOCE_RS01800
location: 349862..350791
location: region:349862-350791:1
so has part: feature:349862-350791:1:exon

WP_013275180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349862-350791:1:exon

TOCE_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01805
old locus tag: Toce_0350
so part of: sequence
location: 350764..352428
location: region:350764-352428:1
so has part: feature:350764-352428:1:exon
subclass of: SO_0000010

position:350764:1
position: 350764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352428:1
position: 352428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350764-352428:1:exon

TOCE_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01805
old locus tag: Toce_0350
inference: COORDINATES: protein motif:HMM:NF010167.0
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0015833 - peptide transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MPIFEIKDLTYFYPESQRPALKDVNMSIEEGEFLLVTGGSGSGKSSLARVLAGLIPGFSGGRISGSVFFRGKDIEQIDRRTMAGEVGIVFQDPEKQLVKTSVEAEIAFGLENLGLPQQEMARRVAEVMSFLGLADLRREFTAKLSGGQKQKLALAAVLAMQPSVLILDEPTSQLDPVAAEDFLNVVKRLNEDMGLTVILIEQRLERCFHLADKVLIMEDGRIRFEGTPEQVARRAAFCENPFIPPVARFFGKVGFNTIPVTVKDGRRMLKQNFNPAPGNFSMSSSEGMHEREPLIRMEGVWFTYPDGREALQDINLEICAGELVAVIGPNGSGKSTLLKNMAGLLKPGRGRVIMMGNKQPKSATRTTWDPSVGYLSQNPNDYLFQDTVEEELLYTLKNFGIASNGAVDEIIEKLSLGDFRRVNPRDLSYGERQRVALASVLVTGPKLLLLDEPTKGLDYRLKSDLGEVLAEFCRQGAAVVLTTHDVEFAAKYASRVIMLFCGRVICDGPVHQVLSDSIFYSTQIGRMCRGFADGILTPEEALAVFKPALAKIIN
SIO_010081: TOCE_RS01805
subclass of: SO_0000673
so part of: TOCE_RS01805
location: 350764..352428
location: region:350764-352428:1
so has part: feature:350764-352428:1:exon

WP_013275181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350764-352428:1:exon

TOCE_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01810
old locus tag: Toce_0351
so part of: sequence
location: 352449..353156
location: region:352449-353156:1
so has part: feature:352449-353156:1:exon
subclass of: SO_0000010

position:352449:1
position: 352449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353156:1
position: 353156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352449-353156:1:exon

TOCE_RS01810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01810
old locus tag: Toce_0351
inference: COORDINATES: protein motif:HMM:NF018816.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ECF transporter S component
translation: MKKMLSKILFWLGFGIIPIFMAAAMSGKTTISGEWGVASYIVIFAAIALMYLGFELETSSPKRIAVIAVLGAVGAAGRIAFAAIPNIQPTTFIAIASGYVFGPSAGFMVGSTAALVSNFFLGHGPWTPWQMFAWGLAGSSAGIVKRLSPHIGKWGMAFFCLLWGYLFGWILNLWSWIAFVKPLNWQSFLAVCTASFWFDTLHAVGNAAFYLLFGTSFMKILERFRHKMAATQKIS
SIO_010081: TOCE_RS01810
subclass of: SO_0000673
so part of: TOCE_RS01810
location: 352449..353156
location: region:352449-353156:1
so has part: feature:352449-353156:1:exon

WP_013275182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352449-353156:1:exon

TOCE_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01815
old locus tag: Toce_0352
so part of: sequence
location: 353298..353861
location: region:353298-353861:1
so has part: feature:353298-353861:1:exon
subclass of: SO_0000010

position:353298:1
position: 353298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353861:1
position: 353861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353298-353861:1:exon

TOCE_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01815
old locus tag: Toce_0352
EC number: 6.3.3.2
inference: COORDINATES: protein motif:HMM:TIGR02727.1
GO function: GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO process: GO:0006730 - one-carbon metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-formyltetrahydrofolate cyclo-ligase
translation: MVDKKTLRRTFLEKREGLSREDVKDKSEKIISTLFALEELKKSEVVMFYVNARNEVETRKAIEQALSMGKRVVVPKTIKGKGLLAVEIKSLGELVPGTFGILEPEKDEGLDPKVIDLVVVPGVAFDRRGYRLGYGGGYYDGFLPKLRPEAKKIAIAFELQLADYIPVEKHDVRMDAIVTEKGVYRFN
SIO_010081: TOCE_RS01815
subclass of: SO_0000673
so part of: TOCE_RS01815
location: 353298..353861
location: region:353298-353861:1
so has part: feature:353298-353861:1:exon

WP_013275183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353298-353861:1:exon

TOCE_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: guaA
locus tag: TOCE_RS01820
old locus tag: Toce_0353
so part of: sequence
location: 353958..355493
location: region:353958-355493:1
so has part: feature:353958-355493:1:exon
subclass of: SO_0000010

position:353958:1
position: 353958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355493:1
position: 355493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353958-355493:1:exon

TOCE_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: guaA
locus tag: TOCE_RS01820
old locus tag: Toce_0353
EC number: 6.3.5.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778772.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO process: GO:0006177 - GMP biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine-hydrolyzing GMP synthase
translation: MIKDQENVIVLDFGGQYSQLIARRVREASIYCEILPYNTPMDEILKRKPKAIVFSGGPASVYSENAPVCDKRIFDTGIPILGICYGMQLMCHMLGGRVEPAETAEYGRAELVVEEEDGIFSGLEKNLTVWMSHGDSIITLPEGFRTLARTKNTPHAAIGNGRNLFGVQFHPEVVHTPRGREILNNFLFGIAGCTGTWSMKTFVEEQIRLIRERVGNGRALCALSGGVDSSVAAVITHRALGDNLTCIFVDHGLLRKDEARKVIETFKDKFHINLIAVDASDRFLKRLEGVTDPEAKRRIIGEEFIRVFEDEAKKLGKIDFLVQGTLYPDVIESGTQTAAVIKTHHNVGGLPQDLNFELIEPLRDLFKDEVRKVGLQLGLPEEIVYRQPFPGPGLAVRVLGEVTREKLSILREADAIVTEEVKKAGLDRELWQAFAVLTDVKSVGVMGDERTYAYTVAIRAVTSEDGMTADWARLPYDLLDNMSTRIVNEVPGVNRVVYDITSKPPATIEWE
SIO_010081: TOCE_RS01820
subclass of: SO_0000673
so part of: TOCE_RS01820
location: 353958..355493
location: region:353958-355493:1
so has part: feature:353958-355493:1:exon

WP_013275184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353958-355493:1:exon

TOCE_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01825
old locus tag: Toce_0354
so part of: sequence
location: 355583..356539
location: region:355583-356539:1
so has part: feature:355583-356539:1:exon
subclass of: SO_0000010

position:355583:1
position: 355583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356539:1
position: 356539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355583-356539:1:exon

TOCE_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01825
old locus tag: Toce_0354
inference: COORDINATES: protein motif:HMM:TIGR02136.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PstS family phosphate ABC transporter substrate-binding protein
translation: MSSKLKGAKAGYVLALFTLSLAAVLVVTACGASNRNQGGQANLSGSIEIDGSSTVYPITEAVAEEFMNTYPDVNITVGVSGTGGGFKRFTAGETDISNASRPISDEEAAKAKESGVEYIELPVAYDGITVVVNKENDWVDHLTVEELKKIWSPGSKVTKWSDIRPGWPDEKINLYGPGTDSGTFEYFTEAVNGEAKKSRSDYTASEDDNVLVQGVSGDRYALGYFGFAYYLENSDKVKAVPIDGGSGPVEPTAESIKNGTYKPLARPIFIYVNKKSLERPEVKEFVKFYMENAAELVEEVGFVPMPESEYQENLNKIE
SIO_010081: TOCE_RS01825
subclass of: SO_0000673
so part of: TOCE_RS01825
location: 355583..356539
location: region:355583-356539:1
so has part: feature:355583-356539:1:exon

WP_013275185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355583-356539:1:exon

TOCE_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: pstC
locus tag: TOCE_RS01830
old locus tag: Toce_0355
so part of: sequence
location: 356661..357554
location: region:356661-357554:1
so has part: feature:356661-357554:1:exon
subclass of: SO_0000010

position:356661:1
position: 356661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357554:1
position: 357554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356661-357554:1:exon

TOCE_RS01830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: pstC
locus tag: TOCE_RS01830
old locus tag: Toce_0355
inference: COORDINATES: protein motif:HMM:TIGR02138.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate ABC transporter permease subunit PstC
translation: MVDSAGKGFRGEKGIEILLALAASVSVLVTIGIVVSLFSETAGFFKEVSVKEFFTETRWTPLFTPAHYGIAPLVAGTMLVTVIAMIVAAPLGLASAIYLSEYAPDGVRRLIKPVLEILAGIPTIVYGYFALTFVTPIIRAILPQTNVFNALSAGIVMGIMLIPMISSLSEDAMTAVPNSLREAAYALGATKLEVAYKVVIPAAISGIVASFILAISRAIGETMIVALAAGSTPKLTFNPLDSIQTMTAFIAQVMLGDAPFGSIEYKSVYAVAGVLFVVTLSLNLIGTWIVRRYKEVY
SIO_010081: TOCE_RS01830
subclass of: SO_0000673
so part of: TOCE_RS01830
location: 356661..357554
location: region:356661-357554:1
so has part: feature:356661-357554:1:exon

WP_013275186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356661-357554:1:exon

TOCE_RS01835
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: pstA
locus tag: TOCE_RS01835
old locus tag: Toce_0356
so part of: sequence
location: 357554..358438
location: region:357554-358438:1
so has part: feature:357554-358438:1:exon
subclass of: SO_0000010

position:358438:1
position: 358438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357554-358438:1:exon

TOCE_RS01835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: pstA
locus tag: TOCE_RS01835
old locus tag: Toce_0356
inference: COORDINATES: protein motif:HMM:TIGR00974.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate ABC transporter permease PstA
translation: MTVQDEMFSPGLQNRQRRNRIFMWLFLSANLLGLLVLVVLLAKVLRDSWGWLDLQFITSFPSRSPEKAGILPALYGTIYVMIITAVFAIPLGIAAAVFLEEYSKKSKFLSFIQVNIYNLAGIPSIVYGILGLTVFVRWMMLGRSLLAGGLTMGLLILPVIIVTAQEAIRAVPQSWRHASYALGASKWQTIRYVVLPSALPGILTGIILALSRAIGETAPLIPIGALTFVRVIPRSLFDSFSVLPIQIYNWTSRPQDDFRAIAAAGIVVLLVVLLGMNSAAILLRNKYQGRIKKV
SIO_010081: TOCE_RS01835
subclass of: SO_0000673
so part of: TOCE_RS01835
location: 357554..358438
location: region:357554-358438:1
so has part: feature:357554-358438:1:exon

WP_013275187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357554-358438:1:exon

TOCE_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: pstB
locus tag: TOCE_RS01840
old locus tag: Toce_0357
so part of: sequence
location: 358435..359190
location: region:358435-359190:1
so has part: feature:358435-359190:1:exon
subclass of: SO_0000010

position:358435:1
position: 358435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359190:1
position: 359190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358435-359190:1:exon

TOCE_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: pstB
locus tag: TOCE_RS01840
old locus tag: Toce_0357
EC number: 7.3.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004810563.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate ABC transporter ATP-binding protein PstB
translation: MNLERIITVRNLFVSYGHHRVLKGINLDIYKNRITAIMGPSGCGKSTLLRCLNRMIDLSEGARIKGQVLYRGENIYSPKVDPAHIRFRIGMVFQKPNPFPKSIFENVAFGPRINGYKGDLSALVEQSLQRAGLWDEVKDRLHENAYMLSGGQQQRLCIARALALEPEVLLLDEPCSALDPISTMHVEELIRQLKERLTIVIVTHNIQQAARVADYTAFLLQGELVEFGETSAMFTVPKDKRTEDFITGRFG
SIO_010081: TOCE_RS01840
subclass of: SO_0000673
so part of: TOCE_RS01840
location: 358435..359190
location: region:358435-359190:1
so has part: feature:358435-359190:1:exon

WP_013275188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358435-359190:1:exon

TOCE_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: aroC
locus tag: TOCE_RS01845
old locus tag: Toce_0358
so part of: sequence
location: 359221..360354
location: region:359221-360354:1
so has part: feature:359221-360354:1:exon
subclass of: SO_0000010

position:359221:1
position: 359221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360354:1
position: 360354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359221-360354:1:exon

TOCE_RS01845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: aroC
locus tag: TOCE_RS01845
old locus tag: Toce_0358
EC number: 4.2.3.5
inference: COORDINATES: protein motif:HMM:TIGR00033.1
GO function: GO:0004107 - chorismate synthase activity [Evidence IEA]
GO process: GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chorismate synthase
translation: MLRFLTAGESHGKALVAVIEGLPANLAVDVDFINRELSRRQMGYGRGGRMKIEKDAVEVISGLREGRTTGSPVAFIIPNLDYPNWKDKALEPVTRPRPGHGDLAGALKYRQDDIRNILERASARETAARVAVGAVAKQLLAIFNIEVLSHVIAIGGIKANVKDPLLEDLRRADESPVRCLDRIAEQKMMEAIDNAKRDGDSLGGVFEVVAFNVPVGLGSHAHWDRKLDGRIVWSLMSVQGIKGVEIGLGFEAAARKGSQVHDEIFYDSESRRFYRKTNNAGGLEAGITNGCPLVVRAAMKPIPTLYRPLLSVDIKTKEQFAAGVERSDVCAVPAASIVGEAAVAWVLAGALVEKFGGDTVEEMREGFERWMKYLQEF
SIO_010081: TOCE_RS01845
subclass of: SO_0000673
so part of: TOCE_RS01845
location: 359221..360354
location: region:359221-360354:1
so has part: feature:359221-360354:1:exon

WP_013275189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359221-360354:1:exon

TOCE_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: aroB
locus tag: TOCE_RS01850
old locus tag: Toce_0359
so part of: sequence
location: 360376..361473
location: region:360376-361473:1
so has part: feature:360376-361473:1:exon
subclass of: SO_0000010

position:360376:1
position: 360376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361473:1
position: 361473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360376-361473:1:exon

TOCE_RS01850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: aroB
locus tag: TOCE_RS01850
old locus tag: Toce_0359
EC number: 4.2.3.4
inference: COORDINATES: protein motif:HMM:TIGR01357.1
GO function: GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-dehydroquinate synthase
translation: MESLTVELGARSYLIHIGPGNLDEIGKILRALIGPEKILVITDENVRDLYAGRVLESLKEAGFDAHIAVIPPGEPSKTLKEAERLYIKALDYGLDRNSAIIALGGGVVGDLAGFVAATYMRGIRYVQVPTSLLAQVDSSVGGKVAVNLKLAKNIVGAFHQPVAVIIDPLTLKTLPDREFREGLAEVIKYGIIWDGDFYEWLEKNVTILRQGGEKLIYAIKKSCAIKAAVVSLDERDEGTRMLLNYGHTVGHALESLLGYGALLHGEAVAAGMIIEAAIALEIGLLGRRDYERIVTILKQAVPVKIPGPVDTSDLIEAMARDKKNKGRRVAFVLPEKPGRAGLYYDIPGEILYKILDQFFKKSTVP
SIO_010081: TOCE_RS01850
subclass of: SO_0000673
so part of: TOCE_RS01850
location: 360376..361473
location: region:360376-361473:1
so has part: feature:360376-361473:1:exon

WP_013275190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360376-361473:1:exon

TOCE_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: fbp
locus tag: TOCE_RS01855
old locus tag: Toce_0360
so part of: sequence
location: 361600..362685
location: region:361600-362685:1
so has part: feature:361600-362685:1:exon
subclass of: SO_0000010

position:361600:1
position: 361600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362685:1
position: 362685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361600-362685:1:exon

TOCE_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: fbp
locus tag: TOCE_RS01855
old locus tag: Toce_0360
EC number: 3.1.3.11
EC number: 4.1.2.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778764.1
GO function: GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]; GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fructose-1,6-bisphosphate aldolase/phosphatase
translation: MSKITLTVIKADIGGYVGHCSVHPDLIEEAKSVLEEKGKGLLEDYVVTHVGDDINLIMTHRKGVDNTEIHKLAWDTFLSCTQIAKKLKLYGAGQDLLSDSFSGNIKGMGPGVAEMEFEERPSEPVIVFMADKTEPGAWNLPLYKMFADPFNTIGLVIDPKMHQGFKFEVLDTIENKKIVFSCPEELYDLLVFLGAANRYAVKAVYSKSGEPAAVSSTQRMNLMAGRYVGKDDPVLIVRCQSGLPAVGEALEPFANPHLVAGWMRGSHFGPLMPVSCNGATPSRFDGPPRVVALGFQLAGGKLVGPQDMFADVSFDRAREKALEMADYFRQLGPFEPHRLPLDEMEYTTLPQVMEKLKDRFE
SIO_010081: TOCE_RS01855
subclass of: SO_0000673
so part of: TOCE_RS01855
location: 361600..362685
location: region:361600-362685:1
so has part: feature:361600-362685:1:exon

WP_013275191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361600-362685:1:exon

TOCE_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01860
old locus tag: Toce_0361
so part of: sequence
location: 362920..364425
location: region:362920-364425:1
so has part: feature:362920-364425:1:exon
subclass of: SO_0000010

position:362920:1
position: 362920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364425:1
position: 364425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362920-364425:1:exon

TOCE_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01860
old locus tag: Toce_0361
inference: COORDINATES: protein motif:HMM:NF037979.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium-dependent transporter
translation: MEESKAQWSSRVGFILASLGMAFGTGNIWRFPRVAAANGGGAFLIAFLIATILWAVPLLMMEMVMGKTTRLGTVGAFRNFCGKKYTWFGAWIGFCSVAIMFYYSVVMGWALRYFVYGITGAIKPGIDSETMWKAFLNDPSQTILFHFISIAIAGFIIYRGVKEGLEIANKTIVPSMLVLLIVVMVWALTKPNAVQGLEYLYNPNLSQLLDAKVWLNAFTQAAWSVGAGWGLMLTYAVYMRDEDDIGANSFVVAFADSGSSLISAMAVLPLVFAVSPSVEVAKKALESGHTGMTFIYLTKFFPNLPGGTFFAALFFLALSIAALASLLSMVELATLNLQDMGIDRKKAAILVTVVTFLLGIPSAYSSWFLDNQDMVWGVGLLIAGVLYSLAAYRYGIDRVRTEIINPNSYVHIGKWWNYAIGGFPIMFAFVFGWWILQSITWYPKTWWNPFEQYSPATMVIQWSVVALVFYLANNWLAEKIKAPYKEVSARESSADRGEGRK
SIO_010081: TOCE_RS01860
subclass of: SO_0000673
so part of: TOCE_RS01860
location: 362920..364425
location: region:362920-364425:1
so has part: feature:362920-364425:1:exon

WP_013275192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362920-364425:1:exon

TOCE_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01865
old locus tag: Toce_0363
so part of: sequence
location: 364663..365484
location: region:364663-365484:1
so has part: feature:364663-365484:1:exon
subclass of: SO_0000010

position:364663:1
position: 364663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365484:1
position: 365484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364663-365484:1:exon

TOCE_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01865
old locus tag: Toce_0363
inference: COORDINATES: protein motif:HMM:NF012703.2
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arginase family protein
translation: MALPAVNIVRSDESLSFQKNLMKKANVILDLTGATGLRFCSEKKHFMKVKQKLAPSKPGITFLGPGDFHHLSAHFIDGIKPKPVLVLFDHHSDMLGSPDGFVTCGSWVAHVLREGKVKKCLVAGISSKDEALFKVSSDCRAVFLPEDLPHDKVVSAIVEELVKSGGPVYISIDKDVLSQKDAATNWDQGCMSLDELLDFIEVIGETAPVAGADVCGEWRVPVDRVFLNREDVEKTGLNEQANIKILEKLLKVWQKNSKIAYIKPELGRGIYGV
SIO_010081: TOCE_RS01865
subclass of: SO_0000673
so part of: TOCE_RS01865
location: 364663..365484
location: region:364663-365484:1
so has part: feature:364663-365484:1:exon

WP_013275194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364663-365484:1:exon

TOCE_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01870
old locus tag: Toce_0364
so part of: sequence
location: 365474..366277
location: region:365474-366277:1
so has part: feature:365474-366277:1:exon
subclass of: SO_0000010

position:365474:1
position: 365474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366277:1
position: 366277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365474-366277:1:exon

TOCE_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01870
old locus tag: Toce_0364
EC number: 2.4.2.28
inference: COORDINATES: protein motif:HMM:NF013232.2
GO function: GO:0017061 - S-methyl-5-thioadenosine phosphorylase activity [Evidence IEA]
GO process: GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-methyl-5'-thioadenosine phosphorylase
translation: MEYKADIGVIGGTGFYAFLDDVKEITVETPYGAPSDKIALARIKDKTVAFLPRHGKDHRYPPHMINYRANIYALKQLGVTRILGPCASGSLQPHIKPGDFVICDQFVNRTWGRKDTFYDGPITTHIGGAEPYCPELRKIAIEAAKDMGLPVHERGTVVVVQGPRFSTKAESREFSSHGWEVINMTQYPEVVLAREMEICYANITLVTDYDVGLEGHPDVEPVSHEMVLKVFNENLGKLKDLIYSIIERIPENRGCRCKEELKTARMG
SIO_010081: TOCE_RS01870
subclass of: SO_0000673
so part of: TOCE_RS01870
location: 365474..366277
location: region:365474-366277:1
so has part: feature:365474-366277:1:exon

WP_013275195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365474-366277:1:exon

TOCE_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01875
old locus tag: Toce_0365
so part of: sequence
location: 366393..367049
location: region:366393-367049:1
so has part: feature:366393-367049:1:exon
subclass of: SO_0000010

position:366393:1
position: 366393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367049:1
position: 367049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366393-367049:1:exon

TOCE_RS01875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01875
old locus tag: Toce_0365
inference: COORDINATES: protein motif:HMM:NF012804.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class II aldolase/adducin family protein
translation: MLLLKIKQKVVEYGEKIVKEGLVVATWGNISARNGHDDVFVITPSGMSYTILEPDDIVEVDINGNPLSPGRKPSVETPMHAAIYRARPDVRAIIHTHSTNACACAVARMDIPCIMEDMACMVGGPVKVADYAPTGSQELARNVVKALGDRNAVLLANHGVVTVGRDLEEAFKLSLLVEKSAEIFIKAKLIRFPFSLNESEVQFLRNFYRTSYGQGDKK
SIO_010081: TOCE_RS01875
subclass of: SO_0000673
so part of: TOCE_RS01875
location: 366393..367049
location: region:366393-367049:1
so has part: feature:366393-367049:1:exon

WP_013275196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366393-367049:1:exon

TOCE_RS01880
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01880
old locus tag: Toce_0366
so part of: sequence
location: 367124..368713
location: region:367124-368713:1
so has part: feature:367124-368713:1:exon
subclass of: SO_0000010

position:367124:1
position: 367124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368713:1
position: 368713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367124-368713:1:exon

TOCE_RS01880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01880
old locus tag: Toce_0366
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778762.1
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HEAT repeat domain-containing protein
translation: MQRKSRKKASKVDYSLLIKREILAYLEALKNKDYTVGQLDKSMKKLFSMGDLVVPVCLSKLKESDEELAPIVCYALEYANDYRLVGPLMDILVMPQVSDKVKARILTVLSHYGVDTGDLPLNNIMSDFERIATQSLVEMIEDINRDYFLIPYILDDLQEFPLEARLAYIKDIGEHRLEKAVVLLEILAKTDDVPVAEEAARALGRIKTGRALYALNKLSREVTNDRVKKTVERESLRLKFSGVVEEPYDPPVTLKKPTKIVLSSIDGLGSRALWIAWRNPSKNRKLCSMNLLLNSSAGIKDCWSILQITSREFNNSVRDLSRSTVIMETNAEHAVSLIRDAYFWNCQVGNPVPYQFFFWKGIIEQSMSCHITPKIYKPDFSEYDLEAIKENKDYLKNTFDLFNYRIFEDWFVAEPRVYDYAEEHKSKNGFYIKKMTISKAENLFARFTSELIEPRAAVLMRMLELASDFLNKMGERELVKVVLSAMLHMDIKPLHHHPFIQRMIIESLRVALVNMKNGFDMRVNPEAFD
SIO_010081: TOCE_RS01880
subclass of: SO_0000673
so part of: TOCE_RS01880
location: 367124..368713
location: region:367124-368713:1
so has part: feature:367124-368713:1:exon

WP_013275197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367124-368713:1:exon

TOCE_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: metK
locus tag: TOCE_RS01885
old locus tag: Toce_0367
so part of: sequence
location: 368736..369929
location: region:368736-369929:1
so has part: feature:368736-369929:1:exon
subclass of: SO_0000010

position:368736:1
position: 368736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369929:1
position: 369929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368736-369929:1:exon

TOCE_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: metK
locus tag: TOCE_RS01885
old locus tag: Toce_0367
EC number: 2.5.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778761.1
GO function: GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO process: GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine adenosyltransferase
translation: MGRKFLFTSESVTEGHPDKICDQISDAILDAILEKDPMARVACETAVTTGLVLVMGEITCDCYVDIPKIARETIREIGYTRAKYGFDCDTCAVITSIDEQSPDIAVGVDAAYEIREEGCGDELDRIGAGDQGMMFGFAVDETPELMPMPIMMAHKLARRLAEVRKTRLLPYLRPDGKTQVTVEYEDGRPVRVDKVVVSAQHKSTVDLTTLRHDIIEAVVKKVIPEELIDKNTKFYINPTGRFVVGGPHGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLAKKCEVQVAYAIGVAHPVSIMVDTFGTGVIPEEKIQKLVIENFDLRPGAIIRDMDLRRPIYKQVAAYGHFGRTDLDVPWERTDKAEILRKQASSL
SIO_010081: TOCE_RS01885
subclass of: SO_0000673
so part of: TOCE_RS01885
location: 368736..369929
location: region:368736-369929:1
so has part: feature:368736-369929:1:exon

WP_013275198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368736-369929:1:exon

TOCE_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01890
old locus tag: Toce_0368
pseudo: true
so part of: sequence
location: 370053..>371405
location: region:370053-371405:1
so has part: feature:370053-371405:1:exon
subclass of: SO_0000010

position:370053:1
position: 370053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371405:1
position: 371405
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370053-371405:1:exon

TOCE_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01890
old locus tag: Toce_0368
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012008915.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1182 family transposase
SIO_010081: TOCE_RS01890
subclass of: SO_0000673
so part of: TOCE_RS01890
location: 370053..>371405
location: region:370053-371405:1
so has part: feature:370053-371405:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:370053-371405:1:exon

TOCE_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01895
old locus tag: Toce_0369
so part of: sequence
location: 371635..372825
location: region:371635-372825:1
so has part: feature:371635-372825:1:exon
subclass of: SO_0000010

position:371635:1
position: 371635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372825:1
position: 372825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371635-372825:1:exon

TOCE_RS01895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01895
old locus tag: Toce_0369
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015295579.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sensor histidine kinase
translation: MKKNRLDVKYLDSIIKTTIEAVEKGHEETFRIAEHAKKECERLQKEVEQLKVRISETIQTVDELQKKERASRNKLMVVSREFNKYSEEDIKAAYEHAREIQIKLTVQREREIQLREKRDQMERSLKNMQDILKQAEQLTLQMGVALNFLKGNLLDLSEKLTDINQKQAIAAQIIKAQEEERKFIAREIHDGPAQTMANVLLQVDVCEKLYEKDSDRARKELRDLKELVRNCIREMRKIIFNLRPAALDDLGLEAVTRRYCAEFQEDTGISVDLSIIGDKRRLDSTVEITLFRVIQEALSNVKKHAGAKNVSVKLEFASDVVNLRIEDDGVGFEFEEVKLLSEDSKHFGLVNMRERVDLLKGTIKIKSEPGRGTGIYISIPLSERRNLNVKDFRGSG
SIO_010081: TOCE_RS01895
subclass of: SO_0000673
so part of: TOCE_RS01895
location: 371635..372825
location: region:371635-372825:1
so has part: feature:371635-372825:1:exon

WP_013275200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371635-372825:1:exon

TOCE_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01900
old locus tag: Toce_0370
so part of: sequence
location: 372797..373438
location: region:372797-373438:1
so has part: feature:372797-373438:1:exon
subclass of: SO_0000010

position:372797:1
position: 372797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373438:1
position: 373438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372797-373438:1:exon

TOCE_RS01900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01900
old locus tag: Toce_0370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778759.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MSKISVVLADDHVLVRKGLKKILEMESDIEVVGEASNGLEAVEEVRTKAPDVVLMDINMPKLNGVEATRVLKKESLKTKVIILTIYDDREYLLELLKTGISGYILKDIDPQALVEAVRAVSRGETYIQPTLTRALIAEYNRLSQPISRASRPLTAREKEVMAYIAEGMSNIEISEKLGISEKTVKNHVSSILRKLNLMDRTQVAVYALKNNLV
SIO_010081: TOCE_RS01900
subclass of: SO_0000673
so part of: TOCE_RS01900
location: 372797..373438
location: region:372797-373438:1
so has part: feature:372797-373438:1:exon

WP_013275201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:372797-373438:1:exon

TOCE_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01905
old locus tag: Toce_0371
so part of: sequence
location: 373505..373960
location: region:373505-373960:1
so has part: feature:373505-373960:1:exon
subclass of: SO_0000010

position:373505:1
position: 373505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373960:1
position: 373960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373505-373960:1:exon

TOCE_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01905
old locus tag: Toce_0371
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPAVGEKLDPALAILMVFAVIGIYRVLELLAISFFGQTTSRRKPKIVLIVRDMEEKIEGIIRSLARRSIFENSETVVVVDEGSMDGTLEILKRLSSEFGFEIAEKCRLDFQKSPFTVLLDCCRLEPREIEAFLGCFTSPKKVEMGLKSYEN
SIO_010081: TOCE_RS01905
subclass of: SO_0000673
so part of: TOCE_RS01905
location: 373505..373960
location: region:373505-373960:1
so has part: feature:373505-373960:1:exon

WP_013275202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373505-373960:1:exon

TOCE_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01910
old locus tag: Toce_0372
so part of: sequence
location: 374198..375910
location: region:374198-375910:1
so has part: feature:374198-375910:1:exon
subclass of: SO_0000010

position:374198:1
position: 374198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375910:1
position: 375910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374198-375910:1:exon

TOCE_RS01910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01910
old locus tag: Toce_0372
EC number: 2.7.7.65
inference: COORDINATES: protein motif:HMM:TIGR00254.1
GO function: GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sensor domain-containing diguanylate cyclase
translation: MISRARYTNVLGIVGTGLLIIFIALYGFELRQPWWQYLLFLLFMFISEINAIQFNNTYLTMEFGFIYAAIFIFGFIPAAVMKAISTLLSQGYIRYNNGNLRETLDLICFNVGQYMISFFGGAGAYLLLKRTGLTEAFAQAVGIFIYFIINNLLVEIYVTFGTGDNTFRKSLRSLCADLTTYAISVPGGLLMVELYRYFDYYHHSFPHLRFLAVLLGLIPYIVLVYIYKIYMGLITTNRELTALYDVAATMTSTLNTQEVLRIIFDSVKNVAPWDTISLFVYQQDALVPLMYEGFYSDSIKDFRLKPGEGITGSTLVSGRGEIINNYKKDSRFRDDPGLPPNTKSVMSVPMINNNEIIGAITLTSNKKNAYNSKHLKIMSILANQATVAISNARLFDKTSKLAVTDSLTRLYNLRYIYEELERMVNRVKNNGGVFSLIIIDIDHFKSYNDRYGHLVGDSILKKLAEVLKDNVRDNDIVGRYGGEEFVIILPDTPGAEAYAIAERIREVVESTEFAQTDTGKKIFITISAGVASCPDDALTVKELVRKADQALLFGAKQKGRNRVVEFKKMN
SIO_010081: TOCE_RS01910
subclass of: SO_0000673
so part of: TOCE_RS01910
location: 374198..375910
location: region:374198-375910:1
so has part: feature:374198-375910:1:exon

WP_013275203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374198-375910:1:exon

TOCE_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01915
old locus tag: Toce_0373
so part of: sequence
location: 376013..378202
location: region:376013-378202:1
so has part: feature:376013-378202:1:exon
subclass of: SO_0000010

position:376013:1
position: 376013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378202:1
position: 378202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376013-378202:1:exon

TOCE_RS01915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01915
old locus tag: Toce_0373
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778747.1
GO function: GO:0004386 - helicase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent RecD-like DNA helicase
translation: MVELEGIVERITYYNEENFFTVARVQVRDTDEIVTAVGYFPSLEVGEVLRLRGRWVMHEKHGCQLKIESYETLVPATVREIENYLASGAIKGIGPATAKKIVERFGENTLEIMSSSPHRLMEIAGIGQKRLEMIVRSFAEQKETREIMLFLQQYGIGPGVAVKVYKAYKEKAIEVVKQNPYRLADEVYGIGFKTADKIARMMGIEMDSPERLAAGVKYALHRAADEGHVFLPEKELLKRASSLMEVDEDRISEVLPALEEKGDIVADGPPEKREVYLAPFYVSEKSVARKLFLLAGLGETRSLEVTPEEISEIEERCGIKLAARQREAIEKAASSGVLVITGGPGTGKTTVIRCLIEFFQGRNLKVVLAAPTGRAAKRMTEATGMEAKTIHRLLEYKAYGEGGMAFGRNRDNPLDEDVVIIDETSMVDIIMMHHLLSALKPFARLVLVGDKDQLPSVGPGSVLREIIDSGRIPVVMLDEIFRQARESMIVVNAHRINRGLFPYLNVKGRDFYFEQAVEPEEVLNKTLDLVCTRLPRFGGYDPMEDIQVITPMKKTPVGVLSLNLQLQERLNPPAPGKKEFPFRSFVFREGDRVMQIKNNYEKEVFNGDLGRIVEIDEDEGVLVSFPDARGERTLIYAGEELEELSLAYALSVHKSQGSEFPVVVMPVTTQHFVMLQRNLLYTAITRARKLMVLVGSKEALAIAVRNSRAAMRYSRLAERIAREFEESLL
SIO_010081: TOCE_RS01915
subclass of: SO_0000673
so part of: TOCE_RS01915
location: 376013..378202
location: region:376013-378202:1
so has part: feature:376013-378202:1:exon

WP_013275204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376013-378202:1:exon

TOCE_RS01920
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01920
old locus tag: Toce_0374
so part of: sequence
location: 378502..379302
location: region:378502-379302:1
so has part: feature:378502-379302:1:exon
subclass of: SO_0000010

position:378502:1
position: 378502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379302:1
position: 379302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378502-379302:1:exon

TOCE_RS01920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01920
old locus tag: Toce_0374
inference: COORDINATES: protein motif:HMM:NF013857.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nicotinate-nucleotide pyrophosphorylase
translation: MDIRDFLFAPLTGRTFMLEITARQRGVLAGTDRLQKIAQELGLKLEDLSPDGTKMAEGSCICRARGDAWQVARAEEQLLGVIGKASGVATAAAEMVYQARSRARVVCGAWKKVPPEVRHDLRQAIATGGAGIRIVDEPFVYLDKNYVRMFGGVGPAVRRARELEGRVVVVQLRGEEASLAEEAVEAAAEGAHILMVDTGRLQDLVLVRDVASKKGFREKIRLAFSGGVVKDELDEIIAAGADIVDVGRAIIDAPLLDFTLDVKKLE
SIO_010081: TOCE_RS01920
subclass of: SO_0000673
so part of: TOCE_RS01920
location: 378502..379302
location: region:378502-379302:1
so has part: feature:378502-379302:1:exon

WP_013275205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378502-379302:1:exon

TOCE_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01925
old locus tag: Toce_0375
so part of: sequence
location: 379308..380231
location: region:379308-380231:1
so has part: feature:379308-380231:1:exon
subclass of: SO_0000010

position:379308:1
position: 379308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380231:1
position: 380231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379308-380231:1:exon

TOCE_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01925
old locus tag: Toce_0375
inference: COORDINATES: protein motif:HMM:NF013183.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-binding protein
translation: MEWDLLEKTTFWVENVDLRGADLGQVAAAAAKALGLDAHEVMVVDVRPGLVAFDVLRRRVQAESVAGREGEILKRLQEVPGVILGPKAGVHSEGVLGLIALKPDEAQEVLSASARMTSEISQAVARRALVFASGSEVLAGKIRDTNSPYLIEALTGAGFRAEFGGILEDDVVAVVNRLEGALERGYGLIITTGGVGAEDKDCNIEAVLRLDPRAHTPWILKFTPDYKRHYKEGVRIAVGRVGMARLIALPGPHEEVRLACRALLEGLSQGLDDAGLAEKIAGVLRRRWYERMGKGGSEHHGFSGHSY
SIO_010081: TOCE_RS01925
subclass of: SO_0000673
so part of: TOCE_RS01925
location: 379308..380231
location: region:379308-380231:1
so has part: feature:379308-380231:1:exon

WP_013275206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379308-380231:1:exon

TOCE_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01930
old locus tag: Toce_0376
so part of: sequence
location: 380206..380979
location: region:380206-380979:1
so has part: feature:380206-380979:1:exon
subclass of: SO_0000010

position:380206:1
position: 380206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380979:1
position: 380979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380206-380979:1:exon

TOCE_RS01930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01930
old locus tag: Toce_0376
inference: COORDINATES: protein motif:HMM:NF013706.2
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarylacetoacetate hydrolase family protein
translation: MDFQAIATNLLEAEETRKAIEPLTSTYPNLTVEDAYRIQLAGVEMRLKQGRRVIGKKIGLTSKAMQDLLGVKEPDYGHLLDNMLLLEGEPCRREDFIWPRVEGELAFVLKDTLKGPGVTIADVFRATEGVMPAIEIVDSRIRDWKISLADTIADNASSARFVLGSRMVPIKDLDLRLLGMVLEKNGEVVSTGTGAAVWGHPAAAVAWLANKLAAFDIALEAGEIVLSGAITAAVDAAAGDVFTVSFYGLGTLNLRFI
SIO_010081: TOCE_RS01930
subclass of: SO_0000673
so part of: TOCE_RS01930
location: 380206..380979
location: region:380206-380979:1
so has part: feature:380206-380979:1:exon

WP_013275207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380206-380979:1:exon

TOCE_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01935
old locus tag: Toce_0377
so part of: sequence
location: 381002..381877
location: region:381002-381877:1
so has part: feature:381002-381877:1:exon
subclass of: SO_0000010

position:381002:1
position: 381002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381877:1
position: 381877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381002-381877:1:exon

TOCE_RS01935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01935
old locus tag: Toce_0377
EC number: 1.2.1.10
inference: COORDINATES: protein motif:HMM:NF006157.0
GO function: GO:0008774 - acetaldehyde dehydrogenase (acetylating) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetaldehyde dehydrogenase (acetylating)
translation: MDKIKVAVIGPGNIGSDLMYKILRSEYLCMEMMAGIVESEGIKRARSLGIRTTTEGIKPILEDESIKIVFDATGAKHHLKHAPLLKEAGKIAIDLTPAAVGPYVVPPVNLKDLHEEPNLNMVTCGGQATVPIVYAINQVAGARYAEIVACIASKSAGQGTRQNIDEFTQTTAKALCAIGGAKKSKAIIILNPADPPIIMTNTIYVDVENPDEKAIREAVDKMVRAVQSYVPGYRLRVPPILEGNKVTTIVEVEGAGDFLPKYAGNMDIITSAAVAVAEKLAARIMGKEAVA
SIO_010081: TOCE_RS01935
subclass of: SO_0000673
so part of: TOCE_RS01935
location: 381002..381877
location: region:381002-381877:1
so has part: feature:381002-381877:1:exon

WP_013275208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381002-381877:1:exon

TOCE_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: dmpG
locus tag: TOCE_RS01940
old locus tag: Toce_0378
so part of: sequence
location: 381874..382893
location: region:381874-382893:1
so has part: feature:381874-382893:1:exon
subclass of: SO_0000010

position:381874:1
position: 381874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382893:1
position: 382893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381874-382893:1:exon

TOCE_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: dmpG
locus tag: TOCE_RS01940
old locus tag: Toce_0378
EC number: 4.1.3.39
inference: COORDINATES: protein motif:HMM:NF006049.0
GO function: GO:0008701 - 4-hydroxy-2-oxovalerate aldolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-2-oxovalerate aldolase
translation: MNGTKFVHIVDTTLRDGSHAVAHQFTREQIKAIAGGLDAAGVEYIEVSHGDGLAGSSYNYGWAALSDEEMLKAAAEVIKKAKLTVLLLPGIGTREDLKLAIECGAKAVRVATHVTEADIAEQHIGMAKKMGLEAFGFLMMAHTAPPEKVVEQALLFESYGADYIYIADSAGAMLPEDVKARVGAVVEKVKVPVGFHAHNNLTLATANCLAALEAGATFLDGACRGLGAGAGNAQTEALIGVLDKAGYRTGVDFYKIMDVAEDVVEPIMQRPQVVRNAPLMLGYAGVYSSFLLHTYRAAEKFGLDPRDILVELGRKGMVGGQEDMIVDVAYQLAKQREGN
SIO_010081: TOCE_RS01940
subclass of: SO_0000673
so part of: TOCE_RS01940
location: 381874..382893
location: region:381874-382893:1
so has part: feature:381874-382893:1:exon

WP_013275209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381874-382893:1:exon

TOCE_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01945
old locus tag: Toce_0379
so part of: sequence
location: 382896..383510
location: region:382896-383510:1
so has part: feature:382896-383510:1:exon
subclass of: SO_0000010

position:382896:1
position: 382896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383510:1
position: 383510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382896-383510:1:exon

TOCE_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01945
old locus tag: Toce_0379
inference: COORDINATES: protein motif:HMM:NF016230.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S binding protein
translation: MKLVNLLAVVDEEKCRGCKTCEKVCPVLAIKMVDRKAKVDEEKCRGCAACEQRCPFYAISMAKREQPVAVGVDVSGVDYSRVEELCRRAKLHPEQIVCYCTATRAEEVAAAVLQGARSPEDVSLVTGARTGCKVECIQPILRLLETAGIKPEPPKGGWQWYGRTPTVWEVPNEVKKKYASRGFYFDEDIKLLDGVAAAPLQGEE
SIO_010081: TOCE_RS01945
subclass of: SO_0000673
so part of: TOCE_RS01945
location: 382896..383510
location: region:382896-383510:1
so has part: feature:382896-383510:1:exon

WP_013275210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382896-383510:1:exon

TOCE_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01950
old locus tag: Toce_0380
so part of: sequence
location: 383514..384962
location: region:383514-384962:1
so has part: feature:383514-384962:1:exon
subclass of: SO_0000010

position:383514:1
position: 383514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384962:1
position: 384962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383514-384962:1:exon

TOCE_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01950
old locus tag: Toce_0380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMRPPIPPIPPRKSQYGIDPSLVKKRVSELPGMTSVLLKDLFPDLPEVIYPGERGIAAVRRATEEALKKVDMSMIKPEHSVNILASHHGFTLLGGEPYAEMLKTLKDVIQARTGCKDIRLRAGVGLRFRETEEYIKRYGLDKHFEGKAIGVAPIDEGIPIETEIGTLYGIKKVYDADWIVHAHNSDVREVHFHRQVDRAVKPFGMSYARIETRSTYHQNLGPRAANFTARAIFDSPFVQSKFAFASFLSVAPNGIVGVDADNDLYALNDRITVLGCRYYGKMMTLFGEIDECIAALDFPCPVVYVFAAGVIYANFAGANTDLYDLDMPLPAYTWYTEAFYGKNGKPLLKEIPPLNPAIKMCVHNYAWTGYPSAFFSEHIPTVVVGYEQADLFNRDPQNLNYMKHAVVAETTEAAMEFAYRVTGTRKVLIFDGAVGGINLSEPLAEFLLKKAPEVNERVESELLPKWLRQRGVDLLELKKCAG
SIO_010081: TOCE_RS01950
subclass of: SO_0000673
so part of: TOCE_RS01950
location: 383514..384962
location: region:383514-384962:1
so has part: feature:383514-384962:1:exon

WP_013275211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383514-384962:1:exon

TOCE_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01955
old locus tag: Toce_0381
so part of: sequence
location: 385039..386283
location: region:385039-386283:1
so has part: feature:385039-386283:1:exon
subclass of: SO_0000010

position:385039:1
position: 385039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386283:1
position: 386283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385039-386283:1:exon

TOCE_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01955
old locus tag: Toce_0381
inference: COORDINATES: protein motif:HMM:TIGR00843.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0042925 - benzoate transmembrane transporter activity [Evidence IEA]
GO process: GO:0042919 - benzoate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: benzoate/H(+) symporter BenE family transporter
translation: MVIKTSLKNEPVWEKGPGFQEGLRDLRSKLNANTFTAGVVAAIFGCTGPALIVMNAAQNGKLTDAQTISWLFSVYFFGGLISIILGFYYKMPINGAYSIPGAVMLASALPLFSFNEAVGAYFIAGVLVLLLGFSGLIGRVMRWIPLPIVMAMIAGAMFRFGLEIVTSAQKAPVIAGAALAAYFIGYRLNKKISPILWSLIVGVVAALLTGGFEFENIKIAWIMPRIFAPTFSMGAFFGIAIPLAVLVIGAENAQAYGVLTAQGYKAPINAMTVISGIGGIVTSFFGGHNANIAGPMTAICSSEEAGPDKSGRYAATIVNGILFGSFGLFASAAVPFVKALPSNLVSMLAGLAMIGVLISAFEQAFAARKFKFGAFFALIIAMSGLTLFKISAPFWSLVGGVLASLIMEPDDFER
SIO_010081: TOCE_RS01955
subclass of: SO_0000673
so part of: TOCE_RS01955
location: 385039..386283
location: region:385039-386283:1
so has part: feature:385039-386283:1:exon

WP_245523159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385039-386283:1:exon

TOCE_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01960
old locus tag: Toce_0382
so part of: sequence
location: 386339..386794
location: region:386339-386794:1
so has part: feature:386339-386794:1:exon
subclass of: SO_0000010

position:386339:1
position: 386339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386794:1
position: 386794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386339-386794:1:exon

TOCE_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01960
old locus tag: Toce_0382
inference: COORDINATES: protein motif:HMM:NF024644.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S dicluster domain-containing protein
translation: MLMVDPSLCTGCHRCEMWCSFTKYGEINPSRSHIYVIRREPAVDVPVVCIQCGLCINACPIGALKRDRISDAVVVDPDLCAGCGICVRVCPYGVLRIDDETGMAAKCDLCGGSPSCAGHCPHGAIRYEDVDKAAARRRELWARAHAVKIRD
SIO_010081: TOCE_RS01960
subclass of: SO_0000673
so part of: TOCE_RS01960
location: 386339..386794
location: region:386339-386794:1
so has part: feature:386339-386794:1:exon

WP_245523160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386339-386794:1:exon

TOCE_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01965
old locus tag: Toce_0383
so part of: sequence
location: 386814..388700
location: region:386814-388700:1
so has part: feature:386814-388700:1:exon
subclass of: SO_0000010

position:386814:1
position: 386814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388700:1
position: 388700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386814-388700:1:exon

TOCE_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01965
old locus tag: Toce_0383
inference: COORDINATES: protein motif:HMM:NF013481.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldehyde ferredoxin oxidoreductase family protein
translation: MWYGFAGKLLRVNLTNGEVKTEELDRDELRKYMGCTGFAAKILYQEMPGGTDPLAPEAKVVVATGPVTGTLCPSGGSYEVCYKSPLTGTWNQARSGGAFGPKLKYAGFDFVVLEGKAAEPVYLYINDGHAEIKSAKHLWGLTVEETTDALIRELDDPEISIAAIGPAGEKGVLYAALINDRGRAAGRGGIGAVFGSKNLKAVAVKGRGGIKVSRPKQFAEAVEKAEQWLENYPFASIPAFGTVGLVSLLNSLGMLPTKNFQTAHFEGADRISGEYLNRKYQIKRRACYGCTFACGRYTSVNSGKFATPPMEGPEYETVNMFGANCGVDDLETVIKANYLCNAYGLDTISTGMSIGFAMECYEKGLLTDKDTEGMPLRWGDGEVVVKLVEKIAHREGIGEFLAQGVKRMAEQLGPEAEELAVHVKGLEAPAHEPRSESKVLAIQYAVSPRGACHMHPNWASTWDFGQLDGGMKDFGLPWPPAGIPEETSQKGMVYRYVALQGEISEILGACIFYSWGTEGSCITPQLYAEIVSALTGWDVTAEELLLAAERSWNLKRCFNAREGFTRKDDRLPKRFSQAIPDGPSAGARVDNLDVMLDAYYEAMGWDKDTGLPTPEKLKELGLDFAIES
SIO_010081: TOCE_RS01965
subclass of: SO_0000673
so part of: TOCE_RS01965
location: 386814..388700
location: region:386814-388700:1
so has part: feature:386814-388700:1:exon

WP_013275214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386814-388700:1:exon

TOCE_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01970
old locus tag: Toce_0384
so part of: sequence
location: 388765..388995
location: region:388765-388995:1
so has part: feature:388765-388995:1:exon
subclass of: SO_0000010

position:388765:1
position: 388765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388995:1
position: 388995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388765-388995:1:exon

TOCE_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01970
old locus tag: Toce_0384
inference: COORDINATES: protein motif:HMM:NF014636.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MoaD/ThiS family protein
translation: MKVKVKLLGILSLRCPAFSRFQCLELEEKKTVGDLREYLGLTGEVCFVSVNGKVVEEGHELAEGDEVIFIPAASGG
SIO_010081: TOCE_RS01970
subclass of: SO_0000673
so part of: TOCE_RS01970
location: 388765..388995
location: region:388765-388995:1
so has part: feature:388765-388995:1:exon

WP_013275215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388765-388995:1:exon

TOCE_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS01975
old locus tag: Toce_0385
so part of: sequence
location: 389182..389967
location: region:389182-389967:1
so has part: feature:389182-389967:1:exon
subclass of: SO_0000010

position:389182:1
position: 389182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389967:1
position: 389967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389182-389967:1:exon

TOCE_RS01975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS01975
old locus tag: Toce_0385
inference: COORDINATES: protein motif:HMM:NF013757.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IclR family transcriptional regulator
translation: MEKTSQIRSVAKALKIVDVLAEAKGELALGEIATKLGLAKSTVHGLLSTLRDFGYVEQSVFTGKYKLGLRLFELGNIVAHGWDVHSVAAPYIQRLVDELGETVHLVVLDKGEVLYIDKRESRHSLRIVSQVGMRLPAHCTGVGKVLLASLPPDEVRRIVAAKGLPRFTKNTITDLETLEKELARVRAQGYAIDNEEIMDSLRCVAAPIRDHSGKVCAAISISGPVARLEGEKLALAIKQVTRTAAEISADLGYQADKSIRV
SIO_010081: TOCE_RS01975
subclass of: SO_0000673
so part of: TOCE_RS01975
location: 389182..389967
location: region:389182-389967:1
so has part: feature:389182-389967:1:exon

WP_013275216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389182-389967:1:exon

TOCE_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: larE
locus tag: TOCE_RS01980
old locus tag: Toce_0386
so part of: sequence
location: 390003..390830
location: region:390003-390830:1
so has part: feature:390003-390830:1:exon
subclass of: SO_0000010

position:390003:1
position: 390003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390830:1
position: 390830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390003-390830:1:exon

TOCE_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: larE
locus tag: TOCE_RS01980
old locus tag: Toce_0386
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778746.1
GO function: GO:0016783 - sulfurtransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent sacrificial sulfur transferase LarE
translation: MEKLERLKSCIKNLGRVVVAFSGGVDSTFLLKVCLDVLGKENVLAVTARSSTYPARELEEARKLAEKFGANHEIIVSEELDIPGFSENPPERCYHCKKELFGKLVAIARERGFNFVLDGSNMDDTGDFRPGMRAKDELGVLSPLKEAGLTKADIRALSREMGLPTWNKPSFACLASRFPYGERITAEKLSRVERAEDLLRELGFIQYRVRSHGDLARIEVSPDEIDRFFDKTLREKVVSGLKGLGFIYVSLDLAGYRTGSMNEGLEEEEKAPWKN
SIO_010081: TOCE_RS01980
subclass of: SO_0000673
so part of: TOCE_RS01980
location: 390003..390830
location: region:390003-390830:1
so has part: feature:390003-390830:1:exon

WP_083768518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390003-390830:1:exon

TOCE_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: larB
locus tag: TOCE_RS01985
old locus tag: Toce_0387
so part of: sequence
location: 390818..391588
location: region:390818-391588:1
so has part: feature:390818-391588:1:exon
subclass of: SO_0000010

position:390818:1
position: 390818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391588:1
position: 391588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390818-391588:1:exon

TOCE_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: larB
locus tag: TOCE_RS01985
old locus tag: Toce_0387
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778745.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
GO process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nickel pincer cofactor biosynthesis protein LarB
translation: MEKLREILERVHRGEMAVDDAIQLLRDLPYEDLGFAKIDHHRALRRGVPEVIFCQGKTPEQVARITRRMLEKGVNIMGTRADLKVYEEVRKIAPDAEYYKDARIFAVKREKIVQNKGTIAVVSAGTSDIPVAEEAAVTAELLGNKVERLYDVGVAGIHRLFMNMEVLKRAQVIIVVAGMEGALASVVAGLVDKPVIAVPTSVGYGANFSGLSALLTMLNSCAGGLTVVNIDNGFGAGFAAHQINRLGGQADGCALS
SIO_010081: TOCE_RS01985
subclass of: SO_0000673
so part of: TOCE_RS01985
location: 390818..391588
location: region:390818-391588:1
so has part: feature:390818-391588:1:exon

WP_013275218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390818-391588:1:exon

TOCE_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: larC
locus tag: TOCE_RS01990
old locus tag: Toce_0388
so part of: sequence
location: 391569..392744
location: region:391569-392744:1
so has part: feature:391569-392744:1:exon
subclass of: SO_0000010

position:391569:1
position: 391569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392744:1
position: 392744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391569-392744:1:exon

TOCE_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: larC
locus tag: TOCE_RS01990
old locus tag: Toce_0388
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778744.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nickel pincer cofactor biosynthesis protein LarC
translation: MDVLYLDCFSGISGDMFLGALLDLGVDVREFLAELKKLPLSGYEIEIKKSVKKGIFGTDVYIKCHEHHPHRGLKEIYGIIDGSSLKPEVKQKSKEAFLKLAVAEGKIHGKPPEEIHFHEVGAVDSIVDIVGACILVDMLNPAKVSASPVNVGCGTVACAHGVLPVPAPATMELLKGVPVYSSGEEGELATPTGALLLSVFAEEFGPMPRGIPAKIGYGLGKKDRRIPNVLRAVLLKAEEDDAETDRVVVMEANIDDMNPQLYEEIMESLFQKGALDVFLTPIIMKKSRPAVKLSCIAPPDKRRELAEAILKETTTIGVRFYEAHRMKLEREIETRSTPLGEVRVKVSKRGGEIVRVTPEYDDIREISRKFGIPVLEAYRDIVGFLNKDKCK
SIO_010081: TOCE_RS01990
subclass of: SO_0000673
so part of: TOCE_RS01990
location: 391569..392744
location: region:391569-392744:1
so has part: feature:391569-392744:1:exon

WP_013275219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391569-392744:1:exon

TOCE_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: gltX
locus tag: TOCE_RS01995
old locus tag: Toce_0389
so part of: sequence
location: 392798..394288
location: region:392798-394288:1
so has part: feature:392798-394288:1:exon
subclass of: SO_0000010

position:392798:1
position: 392798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394288:1
position: 394288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392798-394288:1:exon

TOCE_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: gltX
locus tag: TOCE_RS01995
old locus tag: Toce_0389
EC number: 6.1.1.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778743.1
GO component: GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO function: GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO process: GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate--tRNA ligase
translation: MTDKVRVRFAPSPTGSLHIGGARTALFNLLFARHNNGVFVLRIEDTDTERSTEESVAQILRSMKWLGLDWDEGPEKGGDYGPYFQSQRLELYRKEAQRLLDEGKAYYCYCTPEELAARREAMMKAGKAPRYEGLCRNLCDEDRKRYEAEGRKPVIRLKVPQEGQTVVEDIIRGTVVFENSVLDDFIIMKSNGMPTYNFACVVDDHAMKITHVIRAEEHLSNTPKQIQVYKALGYELPRFAHVPMILAPDRSKLSKRHGATSVEEFRDQGYLSQAIINYLTLLGWSPLDSEEIFDMEKAIREFTLERVNKTAAIYDIKKLTWINGHYLRELDLDYITDQVIPFMVKKGIIAEEDAGKRYEYIKQVVAVSRDRAKTLDELADAIAFFFKDVAEYEEKGVKKHFFKENAAELLIKGAEALERLDEFTHESTERAFRSLTDSIGLKAAELIHPTRLAITGRTVGPGLFEIIVLLGKEETVKRMRKAADWIKNHGTGASAS
SIO_010081: TOCE_RS01995
subclass of: SO_0000673
so part of: TOCE_RS01995
location: 392798..394288
location: region:392798-394288:1
so has part: feature:392798-394288:1:exon

WP_013275220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392798-394288:1:exon

TOCE_RS02000
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02000
old locus tag: Toce_0390
so part of: sequence
location: 394378..394959
location: region:394378-394959:1
so has part: feature:394378-394959:1:exon
subclass of: SO_0000010

position:394378:1
position: 394378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394959:1
position: 394959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394378-394959:1:exon

TOCE_RS02000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02000
old locus tag: Toce_0390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007286743.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HDIG domain-containing protein
translation: MGKIPTRQEAFELLKKYNQNESLIKHALAVEAVMRHFAKLFGEDVEKWGIIGLVHDLDYEKFPEQHCRKVREILAEEGWPEEYIKAVQSHGWKICVDVEPTERMEKVLYTIDELTGLIAATALMRPDRSIMSTTVKSVKKKWKQKSFAAGVNREVIEEGAGMLGMDLDWIIEETIKGMQKVAGEIGLKGDFQG
SIO_010081: TOCE_RS02000
subclass of: SO_0000673
so part of: TOCE_RS02000
location: 394378..394959
location: region:394378-394959:1
so has part: feature:394378-394959:1:exon

WP_013275221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394378-394959:1:exon

TOCE_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02005
old locus tag: Toce_0391
so part of: sequence
location: 395146..395523
location: region:395146-395523:1
so has part: feature:395146-395523:1:exon
subclass of: SO_0000010

position:395146:1
position: 395146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395523:1
position: 395523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395146-395523:1:exon

TOCE_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02005
old locus tag: Toce_0391
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003031320.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MKIVISNTSGEPIYEQIKRQLKESILKGELKEGELLPSIRQLAKDLHISVITTKRAYDDLEREGYITSVVGKGSFVAKQSKESLREIRLKWIEEKMAEIVSESKSLNITLEELQEMLRILYEEDT
SIO_010081: TOCE_RS02005
subclass of: SO_0000673
so part of: TOCE_RS02005
location: 395146..395523
location: region:395146-395523:1
so has part: feature:395146-395523:1:exon

WP_013275222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395146-395523:1:exon

TOCE_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02010
old locus tag: Toce_0392
so part of: sequence
location: 395602..396477
location: region:395602-396477:1
so has part: feature:395602-396477:1:exon
subclass of: SO_0000010

position:395602:1
position: 395602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396477:1
position: 396477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395602-396477:1:exon

TOCE_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02010
old locus tag: Toce_0392
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MEDVVVLDGVTKIYPGFQLDSLSFTIKKGFIHGFIGRNGAGKTTTIKLMMNLVKRDAGTIQIFGLDNRMHEKEIKQRIGFVYAENHFYEELTVEQMKRVVASFYRKWDEQTFQRYLKLLDVPLKKKIKHLSKGMKVKFSIALALSHNADLIVMDEPTSGLDPVVRREILELMSELIQDGEKTVFFSTHITSDLEQIADYITFIHEGRIYFSLTKEEIADLYGIVKGGPDLLNRENRKLFIGLRETPYGFEGLTKEMKKAREIFGDRAIYEAPSLDEIMVYTVKGNTKHQEA
SIO_010081: TOCE_RS02010
subclass of: SO_0000673
so part of: TOCE_RS02010
location: 395602..396477
location: region:395602-396477:1
so has part: feature:395602-396477:1:exon

WP_013275223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395602-396477:1:exon

TOCE_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02015
old locus tag: Toce_0393
so part of: sequence
location: 396482..397108
location: region:396482-397108:1
so has part: feature:396482-397108:1:exon
subclass of: SO_0000010

position:396482:1
position: 396482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397108:1
position: 397108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396482-397108:1:exon

TOCE_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02015
old locus tag: Toce_0393
inference: COORDINATES: protein motif:HMM:NF024741.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC-2 transporter permease
translation: MLTLIYKEFLITRITLIFYIVISLLYNFNILSPGPPLPLVTMLATFFQFMVAGQEDKNNSHIFINSLPVTRKQVVVAKYLFSILVGLLLIGLTVVIQWLMPMYPSGNGFVEIIYAVSAICFFTAAFYPLYFWLGAQFVRIGIFAFFIFVFAVAPILVNIAMKKNCWGILGLFLAMPDHLLAALVLGMTIVLMVISAALSIRIYGRKDF
SIO_010081: TOCE_RS02015
subclass of: SO_0000673
so part of: TOCE_RS02015
location: 396482..397108
location: region:396482-397108:1
so has part: feature:396482-397108:1:exon

WP_013275224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396482-397108:1:exon

TOCE_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02020
old locus tag: Toce_0394
so part of: sequence
location: complement(397331..398101)
location: region:397331-398101:-1
so has part: feature:397331-398101:-1:exon
subclass of: SO_0000010

position:397331:-1
position: 397331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398101:-1
position: 398101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397331-398101:-1:exon

TOCE_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02020
old locus tag: Toce_0394
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MFTLFKYEMRGRYKGILGVCGAIILWSLYLFTIYDGGWRFINISLFYLMSIPAVLVGVFISGVNLFRRDLYQDTGYLVFSLPQKAYAIVGSKLLTSLVEFIIFSFLSGSMVLIHVLNFQEFSRHHLLEALNQLWPEFIYVYLYPIIVLLSALIIAYFAFTLGKAAFCNSRFGLIVSFGVFIISVILINKIHLYLTKVFPYNLMLHIGTVVNEINGQHISTIPVTVSVNVAGLIFQVLVHLCLFIVTLYLLDNKVDI
SIO_010081: TOCE_RS02020
subclass of: SO_0000673
so part of: TOCE_RS02020
location: complement(397331..398101)
location: region:397331-398101:-1
so has part: feature:397331-398101:-1:exon

WP_013275225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397331-398101:-1:exon

TOCE_RS02025
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02025
old locus tag: Toce_0395
so part of: sequence
location: complement(398101..398796)
location: region:398101-398796:-1
so has part: feature:398101-398796:-1:exon
subclass of: SO_0000010

position:398796:-1
position: 398796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398101-398796:-1:exon

TOCE_RS02025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02025
old locus tag: Toce_0395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003051028.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MDFILKAKKLSKNYYSKKVLKDIDIEVPRGKILGLLGPNGSGKTTFIKIVAGLIRPSSGEILIDGQKPGVYTKSIVSYLPDVNFLFKWMRIKDAMSFFKDFYPDFDIEKARRLLEFMELTEDKRITTLSKGMVEKLHLTLVLSRKAKLYILDEPLGGIDPVAREKIIDAIVDNLNEESSMIISTHLVKDIERLFDEVAFISKGEIVLRGNAEELRVEKHKSIEEIFREVFQ
SIO_010081: TOCE_RS02025
subclass of: SO_0000673
so part of: TOCE_RS02025
location: complement(398101..398796)
location: region:398101-398796:-1
so has part: feature:398101-398796:-1:exon

WP_013275226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398101-398796:-1:exon

TOCE_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02030
old locus tag: Toce_0396
so part of: sequence
location: complement(398781..399167)
location: region:398781-399167:-1
so has part: feature:398781-399167:-1:exon
subclass of: SO_0000010

position:398781:-1
position: 398781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399167:-1
position: 399167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398781-399167:-1:exon

TOCE_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02030
old locus tag: Toce_0396
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013400258.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MIIEFDEKQPIYLQIMDLIKRDIVSGKLKGGDKLPSVREMAEKLKVNPNTVQRAYQELEREKVTFTQRGMGTFITKDEGMISALKKKMAKDVLDAFINGMRELGFSGDEILHIVKNYVEKGDPDWISY
SIO_010081: TOCE_RS02030
subclass of: SO_0000673
so part of: TOCE_RS02030
location: complement(398781..399167)
location: region:398781-399167:-1
so has part: feature:398781-399167:-1:exon

WP_013275227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398781-399167:-1:exon

TOCE_RS02035
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02035
old locus tag: Toce_R0009
so part of: sequence
location: 399408..400154
location: region:399408-400154:1
so has part: feature:399408-400154:1:exon
subclass of: SO_0000010

position:399408:1
position: 399408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400154:1
position: 400154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399408-400154:1:exon

TOCE_RS02035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02035
old locus tag: Toce_R0009
inference: COORDINATES: protein motif:HMM:NF005559.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MDFKDKVVVVTGAGRGIGRSIARMYACHGAKVVIADRNFKDAQETERLIKEEGGEAFAVLADVSRPEDVVKLMEKTEEMYGRLDILINNAGFGCWKSPYDLKVEEWDSVINTNLRGTFLCSREAAKIMRKNGGGSIVNIASTRAIMSEPDSESYAASKGGILALTHALAVSLGPDRIRVNAISPGWIETGDYEKLREIDHLQHPAGRVGKPEDIARACLFLTADENGFITGANLVIDGGMTRKMIYEP
SIO_010081: TOCE_RS02035
subclass of: SO_0000673
so part of: TOCE_RS02035
location: 399408..400154
location: region:399408-400154:1
so has part: feature:399408-400154:1:exon

WP_013275228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399408-400154:1:exon

TOCE_RS11820
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: ssrA
locus tag: TOCE_RS11820
so part of: sequence
location: 400229..400577
location: region:400229-400577:1
so has part: feature:400229-400577:1:exon
subclass of: SO_0000659

position:400229:1
position: 400229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400577:1
position: 400577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400229-400577:1:exon

TOCE_RS11820
type: Transfer Messenger RNA
subclass of: SO_0000584
RO_0002162: 555079
gene: ssrA
locus tag: TOCE_RS11820
product: transfer-messenger RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00023
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TOCE_RS11820
subclass of: SO_0000673
so part of: TOCE_RS11820
location: 400229..400577
location: region:400229-400577:1
so has part: feature:400229-400577:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:400229-400577:1:exon

TOCE_RS02045
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02045
old locus tag: Toce_0399
so part of: sequence
location: complement(402075..402527)
location: region:402075-402527:-1
so has part: feature:402075-402527:-1:exon
subclass of: SO_0000010

position:402075:-1
position: 402075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402527:-1
position: 402527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402075-402527:-1:exon

TOCE_RS02045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02045
old locus tag: Toce_0399
inference: COORDINATES: protein motif:HMM:NF017885.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ImmA/IrrE family metallo-endopeptidase
translation: MDVKNVVRKLVKKYKTSDPFEIMDALDIIYIKHPLPENVRGFYFSKLRRKIVVINSIYEKRRQIVTAAHELGHCLLHPKMNAIFLELNTLLVTSKYENEASKFAAELLMYNIDLTKYEGYVMEQIACALDIPENVLKLIVREGSYERSKS
SIO_010081: TOCE_RS02045
subclass of: SO_0000673
so part of: TOCE_RS02045
location: complement(402075..402527)
location: region:402075-402527:-1
so has part: feature:402075-402527:-1:exon

WP_013275229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402075-402527:-1:exon

TOCE_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02050
old locus tag: Toce_0400
so part of: sequence
location: complement(402541..402948)
location: region:402541-402948:-1
so has part: feature:402541-402948:-1:exon
subclass of: SO_0000010

position:402541:-1
position: 402541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402948:-1
position: 402948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402541-402948:-1:exon

TOCE_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02050
old locus tag: Toce_0400
inference: COORDINATES: protein motif:HMM:NF024252.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MDFGERLQELRKEKGISREELARALQVSYSAIAKYETNVRKPDQETLKKIADYFDVTVDYLLGRSNHRQLTRRDERDIEKIIEETRHRIENTEGLLLDGEILSQEDVDAIINAMRVGLEMAKLRNKEKYGRKKKK
SIO_010081: TOCE_RS02050
subclass of: SO_0000673
so part of: TOCE_RS02050
location: complement(402541..402948)
location: region:402541-402948:-1
so has part: feature:402541-402948:-1:exon

WP_013275230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402541-402948:-1:exon

TOCE_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02055
old locus tag: Toce_0401
so part of: sequence
location: 403088..403300
location: region:403088-403300:1
so has part: feature:403088-403300:1:exon
subclass of: SO_0000010

position:403088:1
position: 403088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403300:1
position: 403300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403088-403300:1:exon

TOCE_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02055
old locus tag: Toce_0401
inference: COORDINATES: protein motif:HMM:NF024252.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MREALNTARKVKGFTVKDIATKLGISESFYYKIEKGLRNPTISLAKKISELLEKDIEELFFDEKLDGSSS
SIO_010081: TOCE_RS02055
subclass of: SO_0000673
so part of: TOCE_RS02055
location: 403088..403300
location: region:403088-403300:1
so has part: feature:403088-403300:1:exon

WP_013275231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403088-403300:1:exon

TOCE_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02060
old locus tag: Toce_0402
so part of: sequence
location: 403315..403497
location: region:403315-403497:1
so has part: feature:403315-403497:1:exon
subclass of: SO_0000010

position:403315:1
position: 403315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403497:1
position: 403497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403315-403497:1:exon

TOCE_RS02060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02060
old locus tag: Toce_0402
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIAILKTTISRKKLLKGDFTPDSEEIVGYEEVDEDEFYGPLVRLFSQKLKEAYKESVSN
SIO_010081: TOCE_RS02060
subclass of: SO_0000673
so part of: TOCE_RS02060
location: 403315..403497
location: region:403315-403497:1
so has part: feature:403315-403497:1:exon

WP_013275232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403315-403497:1:exon

TOCE_RS12240
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12240
old locus tag: Toce_0403
so part of: sequence
location: 403592..403756
location: region:403592-403756:1
so has part: feature:403592-403756:1:exon
subclass of: SO_0000010

position:403592:1
position: 403592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403756:1
position: 403756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403592-403756:1:exon

TOCE_RS12240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12240
old locus tag: Toce_0403
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIPKIIEMEADLPDGMTEEQLEKLLRPNLLAFARILARDIKNQNVAETRPKRKE
SIO_010081: TOCE_RS12240
subclass of: SO_0000673
so part of: TOCE_RS12240
location: 403592..403756
location: region:403592-403756:1
so has part: feature:403592-403756:1:exon

WP_013275233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403592-403756:1:exon

TOCE_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02065
old locus tag: Toce_0404
so part of: sequence
location: 403949..404479
location: region:403949-404479:1
so has part: feature:403949-404479:1:exon
subclass of: SO_0000010

position:403949:1
position: 403949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404479:1
position: 404479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403949-404479:1:exon

TOCE_RS02065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02065
old locus tag: Toce_0404
inference: COORDINATES: protein motif:HMM:NF019886.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma factor-like helix-turn-helix DNA-binding protein
translation: MQRWSSWSEMEDQYREGALALKTARDRLKDEDYQRTIADREIMGSMIRDLEDTARVLKRKVLYEFGSLSEDELALLTDRQRQIAELRQRYSYREIAEKTGLAVNTVFYIYQQAVRKLKQAKRKKKEGIPPGLSPQQKEIYVLYSRGVKPKEIASKLNISREVVYVQLNRIKSLTKI
SIO_010081: TOCE_RS02065
subclass of: SO_0000673
so part of: TOCE_RS02065
location: 403949..404479
location: region:403949-404479:1
so has part: feature:403949-404479:1:exon

WP_013275234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403949-404479:1:exon

TOCE_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: ssb
locus tag: TOCE_RS02070
so part of: sequence
location: 404572..404901
location: region:404572-404901:1
so has part: feature:404572-404901:1:exon
subclass of: SO_0000010

position:404572:1
position: 404572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404901:1
position: 404901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404572-404901:1:exon

TOCE_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: ssb
locus tag: TOCE_RS02070
inference: COORDINATES: protein motif:HMM:TIGR00621.2
GO function: GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MNNVTLVGRLTRDPELRKAGDVPVCSFTLAVDRDFLNGEGERETDFIPVVTWRKLAETCANNLKKGRLVGVTGRIQVRQWEQEGKKRREMEVVADSVRFLDRGKKDEGQ
SIO_010081: TOCE_RS02070
subclass of: SO_0000673
so part of: TOCE_RS02070
location: 404572..404901
location: region:404572-404901:1
so has part: feature:404572-404901:1:exon

WP_083768454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404572-404901:1:exon

TOCE_RS12045
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12045
so part of: sequence
location: complement(405027..405395)
location: region:405027-405395:-1
so has part: feature:405027-405395:-1:exon
subclass of: SO_0000010

position:405027:-1
position: 405027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405395:-1
position: 405395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405027-405395:-1:exon

TOCE_RS12045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12045
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTFSSFPIIIGNPINRSLNLIYKDFVNSAFPEIMKTAKEGDEIIVKTHLIPHKFIKKLPGNPKIKEIKASMLTIIINISLAAISFIIRKYVYKLNKGNLLEYLRKLNKHRYYVVIWKKVKK
SIO_010081: TOCE_RS12045
subclass of: SO_0000673
so part of: TOCE_RS12045
location: complement(405027..405395)
location: region:405027-405395:-1
so has part: feature:405027-405395:-1:exon

WP_187286581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405027-405395:-1:exon

TOCE_RS12050
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12050
so part of: sequence
location: 405411..406064
location: region:405411-406064:1
so has part: feature:405411-406064:1:exon
subclass of: SO_0000010

position:405411:1
position: 405411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406064:1
position: 406064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405411-406064:1:exon

TOCE_RS12050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12050
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFTRPDVDKKSADGLQCKPKGKNEPKEIPGKVTGEIEYNKTCQNPKNNPSNPDSINQKTDKINNAHKKPPFHCEFFGSEDLSMGLGNLIAFYLFTRGKSIPNGKIVYYFIENPHLLGKYFPKDDFYFPQFILWMGICGVIFGIRCILLPERWPQKLLIVYDVFFSILMLSIPVYSTIKYLTPGTIFNFLFFLMVWGILFFSRIYLLHESNYYTKKDD
SIO_010081: TOCE_RS12050
subclass of: SO_0000673
so part of: TOCE_RS12050
location: 405411..406064
location: region:405411-406064:1
so has part: feature:405411-406064:1:exon

WP_148218364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405411-406064:1:exon

TOCE_RS12385
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12385
old locus tag: Toce_0406
so part of: sequence
location: 406066..407133
location: region:406066-407133:1
so has part: feature:406066-407133:1:exon
subclass of: SO_0000010

position:406066:1
position: 406066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407133:1
position: 407133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406066-407133:1:exon

TOCE_RS12385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12385
old locus tag: Toce_0406
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MAGNYFARFGEIIARNGIASIPDAIFSFQKELGLSVGECWFVAQILRFKWTTELPRPSLRKMAAYTGVSERTLHNYKNSLIEKGYLILQNRLDRTGRKDTNYYDFSPLFDAIIELLDGKDNTANPIEETELEDDERVSENISDRGVSENFSDTICKNFRYLSENFSEHKQKNIQTEEEYINNNNPPSQDGGNDTRPEAGVVVYLKSLYFEITGRDKGRLIETLAAKHGCEKVQKAIEYLREQLKRNDIARPEGFLVRLLEEDWDLSTFDKIRHMEEKRSKREEEQRRRLEELMNIRASPETAQKYLKLIKQKLRGDDVESKNDILLECGWERGQDLPGDSLRTGVEETQNRGGPG
SIO_010081: TOCE_RS12385
subclass of: SO_0000673
so part of: TOCE_RS12385
location: 406066..407133
location: region:406066-407133:1
so has part: feature:406066-407133:1:exon

WP_223156831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406066-407133:1:exon

TOCE_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02090
old locus tag: Toce_0407
so part of: sequence
location: 407018..407746
location: region:407018-407746:1
so has part: feature:407018-407746:1:exon
subclass of: SO_0000010

position:407018:1
position: 407018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407746:1
position: 407746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407018-407746:1:exon

TOCE_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02090
old locus tag: Toce_0407
inference: COORDINATES: protein motif:HMM:NF025001.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MNPKTISFWSAGGNAGKTSLAIAFALALRKHKTEVVLADFKEVTPHIHKYFGIDFREKSDIYEAIENGQEVVEVVKRHLYKKQSIWIFPGVGLEDFAKFEVKHFSAIIEVLKKEFDHIVIDTSPGIFFSSTYASLKNSDLVYAVLLSNRWSLEDTAMMIDFIYSRWNVEKSRFKALLNMADSGEIDVHTVERVLEVEAFSVRHGQKHITHDVDRLAKVLFEKETVKGYPIRATKTCYEKSIG
SIO_010081: TOCE_RS02090
subclass of: SO_0000673
so part of: TOCE_RS02090
location: 407018..407746
location: region:407018-407746:1
so has part: feature:407018-407746:1:exon

WP_013275236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407018-407746:1:exon

TOCE_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02095
old locus tag: Toce_0408
so part of: sequence
location: complement(407783..409006)
location: region:407783-409006:-1
so has part: feature:407783-409006:-1:exon
subclass of: SO_0000010

position:407783:-1
position: 407783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409006:-1
position: 409006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407783-409006:-1:exon

TOCE_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02095
old locus tag: Toce_0408
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013275237.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MFYGGIDVAKHSHEVCLVNDSGDIVLKMHLDNNHKGMNKLLQALERLGLKPDDVKFCLEATSHYWLPIYCYLTNQGFELHVINPIQSDALRNLYVRKTKTDQKDALLLADLLRLGRAPETRLPSETTLKLQSLSRLRFEFVRQVGGLKNRVLGILDRIFPEYPDCFSDVFIRTSRELLKSYPEPEELAEVDLSELSAFLKEHSRGRFGEERAKKIQSLAKGTFGITMALDAFTLQLRLLVEQIEFIEEQIKVIEDAINEVMEELRPSKDTPYRHVIETIPGIGPVLAAAIIGEIGDISRFPNPRALVAYAGLDATVRASGLFEGTRNRMSKRGSPVLRNSLWLAAVSARRFNPELRAYYEQKRSQGKHSNVATGAVARKLVHLIYSLWKDNRPYDPDYQWSPPGKNA
SIO_010081: TOCE_RS02095
subclass of: SO_0000673
so part of: TOCE_RS02095
location: complement(407783..409006)
location: region:407783-409006:-1
so has part: feature:407783-409006:-1:exon

WP_013275237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407783-409006:-1:exon

TOCE_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02100
old locus tag: Toce_0409
so part of: sequence
location: 409323..410477
location: region:409323-410477:1
so has part: feature:409323-410477:1:exon
subclass of: SO_0000010

position:409323:1
position: 409323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410477:1
position: 410477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409323-410477:1:exon

TOCE_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02100
old locus tag: Toce_0409
inference: COORDINATES: protein motif:HMM:NF012652.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase, T2SS/T4P/T4SS family
translation: MALINPFAPENTDYQPELEIDSTVNSAVEEVVAEIVAECPELVAGVESGACSRALLESKIKDVIVGKKIYRGSIDAFVRKVMDALFGYGPLHPYIEDPEVSDILVNAFNIVYIKKFGKKFRVSVDFGSEENLTRYCYKVAALCGGKLDENYNAEAILTDRKRNLRIVISLKPINVLSPSISIRKPTTGFSLPELVERNMLTDEQADFFRNAVLEKKTIVIAGKGGSGKTTLLGALIDMVPHDERGLLIQETFEIKPRHPDVICKLVRISDNPEVKDYTLFELTKIGLLMSLDRIFIGEIKDKEAMDFFNAVYTGHRGSMATVHANSAGEVVNRLILLMKRSGTDVPVDDLREMLYASLDLIVFMEDYRVKEIFEPKGGGGFCTM
SIO_010081: TOCE_RS02100
subclass of: SO_0000673
so part of: TOCE_RS02100
location: 409323..410477
location: region:409323-410477:1
so has part: feature:409323-410477:1:exon

WP_013275238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409323-410477:1:exon

TOCE_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02105
old locus tag: Toce_0410
so part of: sequence
location: 410465..411367
location: region:410465-411367:1
so has part: feature:410465-411367:1:exon
subclass of: SO_0000010

position:410465:1
position: 410465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411367:1
position: 411367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410465-411367:1:exon

TOCE_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02105
old locus tag: Toce_0410
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHYVAFLQFAVLSTLIYITATEILRAKFRRRLFESYFSRYRKAFGFLESRSNVLKGIDALVARSGIKGKLPFLDAKNMVFASCILFLAGIYFFGRLGFAALFYAAALVYIPYAGMMFLATMNAKKVKAAYLTFLSTFTGFYNIEGNIINALKSTAAYVSEPLRSFLKRNVFLFEKTQRSIAECLDNIAFEVGDKEFRKFINFAKMNAKYGGNFGKALTKLREQAEKLHSLEAIESANAFVGSLVILFMIVINLVLMLNVSNDPEVALAIRNTVTGQAIAISNAAAIIFGLYMIKNINSSA
SIO_010081: TOCE_RS02105
subclass of: SO_0000673
so part of: TOCE_RS02105
location: 410465..411367
location: region:410465-411367:1
so has part: feature:410465-411367:1:exon

WP_013275239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410465-411367:1:exon

TOCE_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02110
old locus tag: Toce_0411
so part of: sequence
location: 411377..412201
location: region:411377-412201:1
so has part: feature:411377-412201:1:exon
subclass of: SO_0000010

position:411377:1
position: 411377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412201:1
position: 412201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411377-412201:1:exon

TOCE_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02110
old locus tag: Toce_0411
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: type II secretion system F family protein
translation: MKIIYSLLLVPVLAYALYNLLREYEIYSLKKRIYRIRSVHEISKLVGKTVRRDILERINANLKAAGRPLGLTAEAYILARAGLFLFSLIYVYLTHMEGIQAVMMLFLGLFGLDIYIHFAKKERLEAFRREMPEIVDLFELGAAADVPLEDIFLITAESAQTKEVRNALTRLAAEYVMTREKEGCLRRFCNEVNLPEANILAMALLQGERTGRTLEILSTLSSSLFNTATAKIARQDKAMEYKVLAATFFLMASIVTLYMYPYFTNIQGGLKLLF
SIO_010081: TOCE_RS02110
subclass of: SO_0000673
so part of: TOCE_RS02110
location: 411377..412201
location: region:411377-412201:1
so has part: feature:411377-412201:1:exon

WP_013275240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411377-412201:1:exon

TOCE_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02115
old locus tag: Toce_0412
so part of: sequence
location: 412216..412419
location: region:412216-412419:1
so has part: feature:412216-412419:1:exon
subclass of: SO_0000010

position:412216:1
position: 412216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412419:1
position: 412419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412216-412419:1:exon

TOCE_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02115
old locus tag: Toce_0412
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFNMLRNLFQRVKEAVCNKKGNEIVAIALILLFIILAAAPYIRNLGQTTSTGISNLNTQMEQVLNGQ
SIO_010081: TOCE_RS02115
subclass of: SO_0000673
so part of: TOCE_RS02115
location: 412216..412419
location: region:412216-412419:1
so has part: feature:412216-412419:1:exon

WP_013275241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412216-412419:1:exon

TOCE_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02120
old locus tag: Toce_0413
so part of: sequence
location: 412463..412888
location: region:412463-412888:1
so has part: feature:412463-412888:1:exon
subclass of: SO_0000010

position:412463:1
position: 412463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412888:1
position: 412888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412463-412888:1:exon

TOCE_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02120
old locus tag: Toce_0413
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDKSFWKRGSAEIVAFVLILPFLILPIANTVNMLTDLTRYDVLRQTAREAILRMEIEGGMTQDALYALEAFLQTKGIDLNKVHIDYTPYPVSYGEEVRLRLAYDYTIRRYTITLGGIRRIDQNATMVYGPISSVSKKYER
SIO_010081: TOCE_RS02120
subclass of: SO_0000673
so part of: TOCE_RS02120
location: 412463..412888
location: region:412463-412888:1
so has part: feature:412463-412888:1:exon

WP_013275242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412463-412888:1:exon

TOCE_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02125
old locus tag: Toce_0414
so part of: sequence
location: 412878..413384
location: region:412878-413384:1
so has part: feature:412878-413384:1:exon
subclass of: SO_0000010

position:412878:1
position: 412878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413384:1
position: 413384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412878-413384:1:exon

TOCE_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02125
old locus tag: Toce_0414
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDKRGSGTIIFGLLFLIPFMTFSLFLIESRLLYTVKNAADDAVTAAALAALKSTNPVDIAYGEYMLDINTARETFYEYLRKNMKLDAGMNPLPGSIAAGAVYVEEFTVYNPGSYPTFCSRGTYIQNTAIHVVVRFKTRRAALKGLFGEYVDITIHRDVDNYYNLQEE
SIO_010081: TOCE_RS02125
subclass of: SO_0000673
so part of: TOCE_RS02125
location: 412878..413384
location: region:412878-413384:1
so has part: feature:412878-413384:1:exon

WP_187286582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412878-413384:1:exon

TOCE_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cpaB
locus tag: TOCE_RS02130
old locus tag: Toce_0415
so part of: sequence
location: 413388..414032
location: region:413388-414032:1
so has part: feature:413388-414032:1:exon
subclass of: SO_0000010

position:413388:1
position: 413388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414032:1
position: 414032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413388-414032:1:exon

TOCE_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cpaB
locus tag: TOCE_RS02130
old locus tag: Toce_0415
inference: COORDINATES: protein motif:HMM:TIGR03177.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Flp pilus assembly protein CpaB
translation: MFAFKRKTVLIVISLLLATGLTFLQYRYFKSMAESDRKIQVVVAAADIEAGEDITGRIGLKTIPQSAYVKGMYLPNEKVSGYAKVNISAGSYILKEMVSTEKVPVVENGMRRVTIGVNLTSSLAGKIRPGDVVDVGWVPKEQEKGAGSKVIAQKVQIYDVVNKMGEDTTKKGDKKNQYEKDMLIPSAVTLIVTPEQAVMIKYHEVIGSLFLVGY
SIO_010081: TOCE_RS02130
subclass of: SO_0000673
so part of: TOCE_RS02130
location: 413388..414032
location: region:413388-414032:1
so has part: feature:413388-414032:1:exon

WP_013275244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:413388-414032:1:exon

TOCE_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02135
old locus tag: Toce_0416
so part of: sequence
location: 414100..414543
location: region:414100-414543:1
so has part: feature:414100-414543:1:exon
subclass of: SO_0000010

position:414100:1
position: 414100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414543:1
position: 414543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414100-414543:1:exon

TOCE_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02135
old locus tag: Toce_0416
inference: COORDINATES: protein motif:HMM:NF016246.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF488 domain-containing protein
translation: MSVNIVYTIGYEGIDLEQFINIIKKNHIDTIIDVRKNPVSRKKGFSKSILNKILFENGIKYKHIEELGTPKDLREKLYRTKDFIMFINEYEKMLQSNMSLLEELLNEIHQENCCLLCYEKNYSKCHRSILAWNIKKMDGNGLIIKHL
SIO_010081: TOCE_RS02135
subclass of: SO_0000673
so part of: TOCE_RS02135
location: 414100..414543
location: region:414100-414543:1
so has part: feature:414100-414543:1:exon

WP_013275245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414100-414543:1:exon

TOCE_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02140
old locus tag: Toce_0417
so part of: sequence
location: 414554..415336
location: region:414554-415336:1
so has part: feature:414554-415336:1:exon
subclass of: SO_0000010

position:414554:1
position: 414554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415336:1
position: 415336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414554-415336:1:exon

TOCE_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02140
old locus tag: Toce_0417
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGSTYKWETKRILITVKAYPQPSRRYGEAVCVAGITDEGKWIRLYPVQFRDLPQEKQFRKYEWIEAKVIKSSDDTRPESYHVDPDSIRKLHFVDTKDNWAERKKIVLPLLNKSLEELIEKCKNENISLGLIKPKEVLDLIIQEEPENWRPEKEIYLRQISLFSSVQKQVLEKIPWSFAYKFICDDKKCNREHILSYVDWEIYQSYRSWRKKYNDKVLNKIKNKYFDYFKNRDLYFYVGTVHKFHRFATFVVIGTFYPPKS
SIO_010081: TOCE_RS02140
subclass of: SO_0000673
so part of: TOCE_RS02140
location: 414554..415336
location: region:414554-415336:1
so has part: feature:414554-415336:1:exon

WP_013275246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414554-415336:1:exon

TOCE_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02145
old locus tag: Toce_0418
so part of: sequence
location: 415793..416002
location: region:415793-416002:1
so has part: feature:415793-416002:1:exon
subclass of: SO_0000010

position:415793:1
position: 415793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416002:1
position: 416002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415793-416002:1:exon

TOCE_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02145
old locus tag: Toce_0418
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKGHQMDYELSYILWRGIHDALEKAIERRDKKAVEPLKRAVEYYNKHFVTSGKYLEDLLSKLESLKGGN
SIO_010081: TOCE_RS02145
subclass of: SO_0000673
so part of: TOCE_RS02145
location: 415793..416002
location: region:415793-416002:1
so has part: feature:415793-416002:1:exon

WP_013275247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415793-416002:1:exon

TOCE_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02150
old locus tag: Toce_0419
so part of: sequence
location: 416022..416411
location: region:416022-416411:1
so has part: feature:416022-416411:1:exon
subclass of: SO_0000010

position:416022:1
position: 416022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416411:1
position: 416411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416022-416411:1:exon

TOCE_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02150
old locus tag: Toce_0419
EC number: 3.4.23.43
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013296842.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prepilin peptidase
translation: MVVLGYLSWVDIKKREVPDWAVLALFIYSLFACRNLKEGFIIGGFVFITHLLVAIAASGSIGGGDIKLISVLAFLMGRDFFLITLSLAGLMLATLIYALVTGKGLRYSIPLVPYLFLSFLISWGCFFEG
SIO_010081: TOCE_RS02150
subclass of: SO_0000673
so part of: TOCE_RS02150
location: 416022..416411
location: region:416022-416411:1
so has part: feature:416022-416411:1:exon

WP_281054647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416022-416411:1:exon

TOCE_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02155
old locus tag: Toce_0420
so part of: sequence
location: 416401..417090
location: region:416401-417090:1
so has part: feature:416401-417090:1:exon
subclass of: SO_0000010

position:416401:1
position: 416401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417090:1
position: 417090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416401-417090:1:exon

TOCE_RS02155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02155
old locus tag: Toce_0420
EC number: 3.1.4.-
inference: COORDINATES: protein motif:HMM:NF014069.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD-GYP domain-containing protein
translation: MKDSMRLFTTMARGEDGLYSVEITRGYCDGKCVFCRRCYENRDILKPVNSYEADFYEEHFVNHQARVAGLCAKVAEYIALEQKKATVLIQAALLHDIGKIFIPSAVFMKKGRLTPEEFEVVKCHAVLGAFYLKGRGFPASVTEAVKHHHERYDGAGYPDGLKGDHIPLLARIIAVCDAADAMLVGRHYRAAISRKMVIDELLRNSGSQFDPDVVNVMVEIINEEAVVNV
SIO_010081: TOCE_RS02155
subclass of: SO_0000673
so part of: TOCE_RS02155
location: 416401..417090
location: region:416401-417090:1
so has part: feature:416401-417090:1:exon

WP_013275248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416401-417090:1:exon

TOCE_RS02160
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02160
old locus tag: Toce_0421
so part of: sequence
location: 417083..418108
location: region:417083-418108:1
so has part: feature:417083-418108:1:exon
subclass of: SO_0000010

position:417083:1
position: 417083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418108:1
position: 418108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417083-418108:1:exon

TOCE_RS02160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02160
old locus tag: Toce_0421
inference: COORDINATES: protein motif:HMM:NF037161.2
GO function: GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0030541 - plasmid partitioning [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParM/StbA family protein
translation: MFKIGLDLGYGYVKGVNEAGKVAVFPSLVGNAYERPLKSLFENNQEKVIDNMHLVVVNGEKLEFFVGELARRESRNVSYAFDQNKINHPNTRALLAAASILLFPAEDLPIHLVSGLPLEEYIHKKDEFKEMLKGYKVLACFKGDEKVKVIKFDKVTIFPQAAGAVYYAIWGDLQNYLIRGSYLGLIDIGFKTTDFIVFLVDNRLVLREDLSGTIDIGISSLYNMADKLFTQKTGGKLDIPELMRLICDGRIFFRGRQLDFSEELKAKKAEIAQVIKDRLKAVWGNKLDFFNTVFLAGGGAKDLQEFLTDIYENTVIVKDPQLANARGFLKVAELEEKKVAK
SIO_010081: TOCE_RS02160
subclass of: SO_0000673
so part of: TOCE_RS02160
location: 417083..418108
location: region:417083-418108:1
so has part: feature:417083-418108:1:exon

WP_013275249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417083-418108:1:exon

TOCE_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02165
old locus tag: Toce_0423
so part of: sequence
location: 418576..418857
location: region:418576-418857:1
so has part: feature:418576-418857:1:exon
subclass of: SO_0000010

position:418576:1
position: 418576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418857:1
position: 418857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418576-418857:1:exon

TOCE_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02165
old locus tag: Toce_0423
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVYSFRLGKGDEDIEQLLKGLARNERSQYIKNALRFYRDFGEKISKIEAMLEKIEASGFYPPGPREEAEPEQAGYDTAEKMLIESLENILSF
SIO_010081: TOCE_RS02165
subclass of: SO_0000673
so part of: TOCE_RS02165
location: 418576..418857
location: region:418576-418857:1
so has part: feature:418576-418857:1:exon

WP_013275251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418576-418857:1:exon

TOCE_RS02170
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02170
old locus tag: Toce_0424
so part of: sequence
location: 419119..419487
location: region:419119-419487:1
so has part: feature:419119-419487:1:exon
subclass of: SO_0000010

position:419119:1
position: 419119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419487:1
position: 419487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419119-419487:1:exon

TOCE_RS02170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02170
old locus tag: Toce_0424
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013296848.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKVTVYLSENTYDVLNNLSSKRKESMSLIARKILEKGLTEEAAKDGIDAVTDAVRRAMRDILKPTEDRLAKLAAKAAVAAATAMYLNTQCIADLGKNNALELYQIARTKAVAYLREKDEEA
SIO_010081: TOCE_RS02170
subclass of: SO_0000673
so part of: TOCE_RS02170
location: 419119..419487
location: region:419119-419487:1
so has part: feature:419119-419487:1:exon

WP_013275252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419119-419487:1:exon

TOCE_RS12390
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: mobP3
locus tag: TOCE_RS12390
old locus tag: Toce_0425
so part of: sequence
location: 419484..421973
location: region:419484-421973:1
so has part: feature:419484-421973:1:exon
subclass of: SO_0000010

position:419484:1
position: 419484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421973:1
position: 421973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419484-421973:1:exon

TOCE_RS12390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: mobP3
locus tag: TOCE_RS12390
old locus tag: Toce_0425
inference: COORDINATES: protein motif:HMM:NF037847.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobP3 family relaxase
translation: MSRAPFIIKIAFYKASQKNQAKNVAHIQYIATRPGADRGEFNIGDDLDADPGTAAGHAKYMDERPGSHGLFGPENKTPDLREVQRELKDHNGIVWRMVLSLKEEDAIRLGYTARESWEKALKATMPEAAAKMGIRESNLKWVAAFHQAQGHPHVHVVMWEKTPQRTRGVLSLGERKDLRRVFVREIYAEERLALTAKKSAIRDLIRETARKDVFSVIREIEKARLEVRALAGQEPGLPPVLHTVTQEELINKLNGLAKIMPGHGRVALKYMPVEVKKEAREIADWILSQPGFTGSVERYKDLARQLAGYHTFQEQRLNEAAQKAYEDMRDRVAQIVLQGAVKVQQIESFIESRPQMTEHEATEYEAVKISEQALERKEIENIPQEGTIGGRRIGAGSADEAAKRLWRTTHYSLNRVYLQENPGADILKPRLNENFRKEIAERLQDIASSMPDLQGKPAYTYLPDELKQKARETAEWLLTRQELQNRFSEIGPLKAERLTRRMAEQVAIRAYDLVPKEVPDVEMVLHSRRAEEAVNKLRSVRSDFVKDDLEEARWTVGAIYRALTYLGKEKEAREVAERFGKEAGLQHNEILKALEKEIERIQFIADKSQEKGQYQRHMSRNDWQQLTENLGLEEEELLFPWFGVKKVEENEAEEKQRVKEELKVTLIEDRVSPAVAVLEQAGGKPEDLKELRWTLVTMTSVLKALGVDEAGRERIVRGWCERAGVDILEARLKDVLDRTTISKDDIWLGKRSWERLMANLGIKDAPDLPWSVGSPIPMSARVASDVWKAAWRALERERLRAEAQVLLAAEREMQRKKREAEREGKSREG
SIO_010081: TOCE_RS12390
subclass of: SO_0000673
so part of: TOCE_RS12390
location: 419484..421973
location: region:419484-421973:1
so has part: feature:419484-421973:1:exon

WP_013275253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419484-421973:1:exon

TOCE_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02180
old locus tag: Toce_0426
so part of: sequence
location: 421963..423804
location: region:421963-423804:1
so has part: feature:421963-423804:1:exon
subclass of: SO_0000010

position:421963:1
position: 421963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423804:1
position: 423804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421963-423804:1:exon

TOCE_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02180
old locus tag: Toce_0426
inference: COORDINATES: protein motif:HMM:NF014581.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MKVRMAIAAIILIFDLFFMPFLCSLPIYAKDYGLQKGFQTWKTYVIENPISGVFLLDKEAIRTPWLWLQPAVAAAVLSVLFPIYGRRRRRTDEMGLPEAAGQGQHGTARWRTKKEISNTLTIWETKNDNPPKGGFVVGAELGRNFKAWLDTGDTHCMVIGSTRSGKSRRTILPTIWTLARSGESMIITDPKGELFNFSSGYLKGLGYKVILIDLRDPYRGNQWNPLLSVASALQDGNYSAASQAAWDIANILTNQQLHVGDSIWPQSQESLTAALILAVASFAPDDSKHLGSVYEMLHRLGANGGDMLDDYFRSLPKGHPASSAYGVAALSEDRLRSSIFTGTAAQLRLWADPAVVWLTSRQDHNLNIAGREKASIFIVIPDERGTRNVIAALYIAQSYQALVDLANANGGKLPQKVNFLLDEFGNLPPIPEFDRKITVAAGRGMRFLLAVQDLSQIKAKYKELSQTITGNCATWVYILTTDLDTARVISGKTGQYTVRTESYSSQVRHTDYSHSTTEGLTGRPLLLPDEVLRWPADRALVLQARCNPAWLPLPDLSKWPAAKDLTPSFSSEEKEKEVVTAPPVWVPGVSAGEEEKKTEITSRENENLLSKLR
SIO_010081: TOCE_RS02180
subclass of: SO_0000673
so part of: TOCE_RS02180
location: 421963..423804
location: region:421963-423804:1
so has part: feature:421963-423804:1:exon

WP_013275254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421963-423804:1:exon

TOCE_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02185
old locus tag: Toce_0427
so part of: sequence
location: 423817..424059
location: region:423817-424059:1
so has part: feature:423817-424059:1:exon
subclass of: SO_0000010

position:423817:1
position: 423817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424059:1
position: 424059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423817-424059:1:exon

TOCE_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02185
old locus tag: Toce_0427
inference: COORDINATES: protein motif:HMM:NF039493.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPDFISGAADLLNDVLTWILYIIPAASGAAIGYHALMKQMGDGDPSVTAAHNRSIRNVLVGGAIGMSAASLVKVFLSYFQ
SIO_010081: TOCE_RS02185
subclass of: SO_0000673
so part of: TOCE_RS02185
location: 423817..424059
location: region:423817-424059:1
so has part: feature:423817-424059:1:exon

WP_013275255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423817-424059:1:exon

TOCE_RS02190
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02190
old locus tag: Toce_0428
so part of: sequence
location: 424110..424964
location: region:424110-424964:1
so has part: feature:424110-424964:1:exon
subclass of: SO_0000010

position:424110:1
position: 424110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424964:1
position: 424964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424110-424964:1:exon

TOCE_RS02190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02190
old locus tag: Toce_0428
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF6102 family protein
translation: MNVISNLINTAITDFITNLLDSILSVFVAFAGDEMALALKILETPYVVNAISLSRTLAGSLLGVKVAAEAVKSYILYSSGDPGADPLNLLRRTAFSAFMIGAGPWAVTNVYKFGGELARAVAKLPSTNADNPLNTIFSLSASFSAALVVTSFAAVIIWALILIQTGIRAVEIAFLAVSGPIMAVGLTRPDEGVWSAWWRELIVLSLSQAVQTFMIRGFLSTAANIFFSSPMLNMLMLIGWLWVAFKTPAVLRQFAYHSGMGSAIGHAGQTAGSMYILRRMMMRG
SIO_010081: TOCE_RS02190
subclass of: SO_0000673
so part of: TOCE_RS02190
location: 424110..424964
location: region:424110-424964:1
so has part: feature:424110-424964:1:exon

WP_013275256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424110-424964:1:exon

TOCE_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02200
old locus tag: Toce_0430
so part of: sequence
location: 425265..425909
location: region:425265-425909:1
so has part: feature:425265-425909:1:exon
subclass of: SO_0000010

position:425265:1
position: 425265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425909:1
position: 425909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425265-425909:1:exon

TOCE_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02200
old locus tag: Toce_0430
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKKLLKDKTSKAEKAKIEDQKKKSVQEWLPVIDITENFVKLKDGRYVSILKVRPLNIGLKSDNEKKRIIHSVFEALNGLKEPLQIFSMGRPVDLDPYIQSLNTKSREEINITKKRLLQEYLKYVASIATGGEAIERRFFIMLSGKEKDELKTKAHELAANLDKSGLKAEMCTDQDIIDLLFCFSHPSQAAFERPPAFTGPYLPPTYFSGGDRL
SIO_010081: TOCE_RS02200
subclass of: SO_0000673
so part of: TOCE_RS02200
location: 425265..425909
location: region:425265-425909:1
so has part: feature:425265-425909:1:exon

WP_013275258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425265-425909:1:exon

TOCE_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02205
old locus tag: Toce_0431
so part of: sequence
location: 425906..427690
location: region:425906-427690:1
so has part: feature:425906-427690:1:exon
subclass of: SO_0000010

position:425906:1
position: 425906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427690:1
position: 427690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425906-427690:1:exon

TOCE_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02205
old locus tag: Toce_0431
inference: COORDINATES: protein motif:HMM:NF014044.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF87 domain-containing protein
translation: MKRQKNTNILTGLIDMLSPQALKFNARQLTFNDQLARIMVVSGYPPKVNAAWLSRIASMPGVVCAVHIEPTDPTNLVLSINKAIGEYAGRLEMGGNALTIQRTEQALKDAQDLLRKIDQEQQQVFYVTVVLMVLAPDQQTLDRRTRQVEAALAASGMRGRTLVFRQEDGLKAVGPWCILPDEVKEAGARNMPAETVAASFPFTASGINDGSGIVLGKDRDGGLVLVDIWKRGGDRTNSNWTILAKPGAGKSFAAKMLLLREFIQGSRVIIIDPEREYKEMCRLLGGSWVNCAGGEGRINPLQVRLRPVGEDEEGDAIFQSPLALHIQTLRTFFSLYLRDLTDIEKAALEDALVEVYRDAGITWDTDPADIPSDKWPTTKELYKYCIGQAKTNNETYGRLAVLLKRCAEGADANLWAGPSTAKAESDLIVLDVHDLQNADEGVRKAQYFNVLSFAWNIIERDRQERTILVVDEAWLLVDPQTPQALAFLRDTSKRIRKYMGSLVVISQNVIDFLAPEVQRYGQALLDNPTYKLLLAQGEKDLEAITGLLNLSEAEHDLLATAKRGEGLLVAGSQRIHLKIEAAPYELQYLTGGGS
SIO_010081: TOCE_RS02205
subclass of: SO_0000673
so part of: TOCE_RS02205
location: 425906..427690
location: region:425906-427690:1
so has part: feature:425906-427690:1:exon

WP_013275259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425906-427690:1:exon

TOCE_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02210
old locus tag: Toce_0432
so part of: sequence
location: 427690..428625
location: region:427690-428625:1
so has part: feature:427690-428625:1:exon
subclass of: SO_0000010

position:428625:1
position: 428625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427690-428625:1:exon

TOCE_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02210
old locus tag: Toce_0432
EC number: 3.4.-.-
inference: COORDINATES: protein motif:HMM:NF013700.2
GO function: GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MHFVGKLILAFLPEPEKIIKFLLIAFFIPALLLILLFAGPITAYERVPLATPSQIKIYVDAAVKVSESTKNPYSEGVKVDWKPLVAIDAVRFMQDFSKSTPAGAEKLAEMFIEKTDEIEVKEGDPPVTKRYPIYRLKSLDEVLDYLKFSAQEKEKVKEFLSIDLSFLFVADSGVLDGWIPLEGSLKWPLPGVYKITSRYGPRIDPVYGGSGFHRGIDIAAATGTPVVAAADGRVAYAGWCGGYGIAVFIWHGDGMETRYAHLSGTAVRQGAVVKAGDIIGYVGSTGKSTGPHLHLEVRVGGKAVNPLDFFK
SIO_010081: TOCE_RS02210
subclass of: SO_0000673
so part of: TOCE_RS02210
location: 427690..428625
location: region:427690-428625:1
so has part: feature:427690-428625:1:exon

WP_013275260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427690-428625:1:exon

TOCE_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02215
old locus tag: Toce_0433
so part of: sequence
location: 428676..429005
location: region:428676-429005:1
so has part: feature:428676-429005:1:exon
subclass of: SO_0000010

position:428676:1
position: 428676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429005:1
position: 429005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428676-429005:1:exon

TOCE_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02215
old locus tag: Toce_0433
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKLYSILKPHDSWCNDEGEEKNLEARKALQDFYRELKKLKPSRKYEKNILHLSYIPYLVRIKKALNEKKYMRACNELISLMHYEPFLQGRIYYNILNLLGKEVMKDYT
SIO_010081: TOCE_RS02215
subclass of: SO_0000673
so part of: TOCE_RS02215
location: 428676..429005
location: region:428676-429005:1
so has part: feature:428676-429005:1:exon

WP_013275261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428676-429005:1:exon

TOCE_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02220
old locus tag: Toce_0434
so part of: sequence
location: 429118..429699
location: region:429118-429699:1
so has part: feature:429118-429699:1:exon
subclass of: SO_0000010

position:429118:1
position: 429118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429699:1
position: 429699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429118-429699:1:exon

TOCE_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02220
old locus tag: Toce_0434
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEDKILILDFMLDVIKEDLKYDFLTNIFYREEYFDRGIRIPPPFPYSYYDETEKKISIFERKIGIKNVDLAKECVLVFPWHRGRMRESIKNIGSNEFRYDKYNHKAFYFSPVNICFIYNGKHSITAGVGFKKGCIEAPEYDVTGLFKHVYTDGVYWYNSHNNQKFEDELLDFRIGIIYELSKLKYQIEKGLE
SIO_010081: TOCE_RS02220
subclass of: SO_0000673
so part of: TOCE_RS02220
location: 429118..429699
location: region:429118-429699:1
so has part: feature:429118-429699:1:exon

WP_013275262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429118-429699:1:exon

TOCE_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02225
old locus tag: Toce_0435
so part of: sequence
location: 429760..430113
location: region:429760-430113:1
so has part: feature:429760-430113:1:exon
subclass of: SO_0000010

position:429760:1
position: 429760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430113:1
position: 430113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429760-430113:1:exon

TOCE_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02225
old locus tag: Toce_0435
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDALEKYEEDAKLYGAFLDAARIAGEKANISRQELLLIDPDNPILKLSMREYALLKSHPILMLAEVLFGGSEGPGRKNISPQMAFLAASVAVGQGYSVDRVFRVLERLFARELERRV
SIO_010081: TOCE_RS02225
subclass of: SO_0000673
so part of: TOCE_RS02225
location: 429760..430113
location: region:429760-430113:1
so has part: feature:429760-430113:1:exon

WP_013275263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429760-430113:1:exon

TOCE_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02230
old locus tag: Toce_0436
so part of: sequence
location: 430118..431203
location: region:430118-431203:1
so has part: feature:430118-431203:1:exon
subclass of: SO_0000010

position:430118:1
position: 430118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431203:1
position: 431203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430118-431203:1:exon

TOCE_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02230
old locus tag: Toce_0436
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLISVILTKQRSEKVIEAAKELGEIILEQVGTLDSQGIKDVLNSAARVASDILILDLDIGSGRDIVAALQSFRIARPHTRIIILAPAREPGDVIVSSLVGLGIYDIISGSKDSDWGKLVKDALARQPATYAQAARWHTGQFLGIPPVKEQVIIEERPSGVVTIAVAGTAHGLGCTYTALSIAYFLARLGHSAAIIEDSQRPSLGFLCSVLKARSGRVQGSFMIHGLDIFPLDESATDVNSNYDILLKKIRAGQYEYIVRDIGVLDPVRVKEIYKADFAFIVASAAKWRWQELIDKIDSEFSIIFPLASQNDIEDLSFYAGIKGTALPHCPNPFSKDNDLLFLKLLAPILPNRKRKKSLFGL
SIO_010081: TOCE_RS02230
subclass of: SO_0000673
so part of: TOCE_RS02230
location: 430118..431203
location: region:430118-431203:1
so has part: feature:430118-431203:1:exon

WP_013275264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430118-431203:1:exon

TOCE_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02235
old locus tag: Toce_0437
so part of: sequence
location: 431673..431927
location: region:431673-431927:1
so has part: feature:431673-431927:1:exon
subclass of: SO_0000010

position:431673:1
position: 431673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431927:1
position: 431927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431673-431927:1:exon

TOCE_RS02235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02235
old locus tag: Toce_0437
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: toxin HicA
translation: MSKREKLIKKMRENPKGIRFEEVDNLLVGIGFHRRQPRKGSSHYIYRMGPHKLVIKRENPVKPVYIKEAIEIIDLIEKGENLNE
SIO_010081: TOCE_RS02235
subclass of: SO_0000673
so part of: TOCE_RS02235
location: 431673..431927
location: region:431673-431927:1
so has part: feature:431673-431927:1:exon

WP_013275265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431673-431927:1:exon

TOCE_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02240
old locus tag: Toce_0438
so part of: sequence
location: 431920..432264
location: region:431920-432264:1
so has part: feature:431920-432264:1:exon
subclass of: SO_0000010

position:431920:1
position: 431920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432264:1
position: 432264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431920-432264:1:exon

TOCE_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02240
old locus tag: Toce_0438
inference: COORDINATES: protein motif:HMM:NF027249.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicB family antitoxin
translation: MSKKDLEYYLNLKYPFIVRPLTEEEGGGFAVEFPDLPFCIGTGDTIEEAIEDAQKAKNAWLEVSYEDGDEIPEPGSSKKAVKIPGDLYRAMENRAKREGKTVDEYVEEILKKVV
SIO_010081: TOCE_RS02240
subclass of: SO_0000673
so part of: TOCE_RS02240
location: 431920..432264
location: region:431920-432264:1
so has part: feature:431920-432264:1:exon

WP_013275266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431920-432264:1:exon

TOCE_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02245
old locus tag: Toce_0439
so part of: sequence
location: 432305..433285
location: region:432305-433285:1
so has part: feature:432305-433285:1:exon
subclass of: SO_0000010

position:432305:1
position: 432305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433285:1
position: 433285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432305-433285:1:exon

TOCE_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02245
old locus tag: Toce_0439
inference: COORDINATES: protein motif:HMM:NF019450.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper amine oxidase
translation: MRKIVVLFLSALLMLYASTPVLAVQEITPDKAFDKEALMRKFTYNGKEYDDLVLVIQGTEGIYASYLSEFLEWRLESGVVYDLDDEEERDLLIKEFFSRKTTGFWMYPSVEIISINGEPWQITEYAEHIKEAVHNNLNPGDLLYDKNGEAWKYFCNPKYNGVASILLKGKTSLSFPVLWEDRISMYNPLNGGKPVKIETDVKDGAVLKLGSPKVTITKNGISKVNTLSVAPLALGGRTLVPIRGVIDEFGYDLGFKKNIVTVTYDGHKIELPVNSKKAYIDGKEVILDQPVIIKNGRTLIPLRFIAENIGFDVAYKDGTINLIKTK
SIO_010081: TOCE_RS02245
subclass of: SO_0000673
so part of: TOCE_RS02245
location: 432305..433285
location: region:432305-433285:1
so has part: feature:432305-433285:1:exon

WP_013275267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432305-433285:1:exon

TOCE_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02250
old locus tag: Toce_0440
so part of: sequence
location: 433328..438799
location: region:433328-438799:1
so has part: feature:433328-438799:1:exon
subclass of: SO_0000010

position:433328:1
position: 433328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438799:1
position: 438799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433328-438799:1:exon

TOCE_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02250
old locus tag: Toce_0440
inference: COORDINATES: protein motif:HMM:NF040138.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PKD domain-containing protein
translation: MPKKAIATILIVILLVGIFPPSFVYQSKVYGATISDPKDINPPAGAQLKVGNSTDWYSAGFWKIYVDGELTGDDLCVVDDLKLSRTGNLWNMLHKNTINAWLDAFTPVPSPTGYYSGATFSKKLGSYDPYYIKTITYGGKSSQRLHIREAGKIAGVASITYDENKKEVYVQTTQFPTGGISFPSGVKEGDNITFQLRGTAYANIDTKKISYEFYIDGKKAASNTLSKTTFNDSVTKTLTAGTHSLVLKVTDGVGRTTTYTKSITVQPGSPPPPPPGNINADLKMTLNPPKLKTGTTGDINVSLDASGCTSTGSGPFAYRWWVKLNGTYITPSDGVNPGDGSPYFSIVAKKAKPGDVIWAKVKVHDYSLNKSSEAETQRTVLEEGVEPPEEPEPEPDPGPTNTPPVARFSMPSKTGQGTTVNVTNRSYDLDGEIVDVEWDVSPSSGVDENLGFDGGTITFDRTGTYDVTLTVWDDFGDSDSTTKTIEVTNEPPEAVISAPVEVIQGDDVVIRSNSYDPDGEISTHRWSILPSEGVMGTLDGEKSTIWFDKTGEYTISLTVEDEFGLEDTTQKTITVKPAIPVAYFDYSGTLKENRKIVLDASGSRTSERYPMVWEATEWQIIPPAGGSESDIKIVSSPDMKTRTVLFKKAGDYTVRVRVKNSAGHYSEWYEKVLTIYPDLPPIADFYVYKTVLRNPDDENYASIQLFDISYSSDGDTINSRIWRYKYDSDNDGSFDDESWVVLDDGNNLSPILKTKNVGKYLFELSVKEGFGEETIPEFISPSDYRTADTSDKPINDKVCELINLRPVVDFEVLKKVKADVVFTIGQAGQKTQDLDSKINQYIKPKLAAKNIDAQISSIQTRIIDSKTNFTWEKYDHGKGKVIGNDIYFYGYTQRGYSDFWYSDDQTPGKKTFTFVLNENQVYYHSFYGGGFIFGAKKYTDGTFEGYVLLFDQSTASIKRIPRVSMSQYSNTDGDFGYVHLIGVPKQKGVHNIKVEIDGIKVKVWDNNNLIIDYTLPQKIGEGFGIVADHNSHDCDETSTFIFGNLVMNFENGKSLDEALKTTTWRDNSIRFLVNISDIELPELNDPIKLGDILSRTLSADAYFVGLGTDTNRAQYQTFIARNDGKGTFFYNTNMDTALNQTADYIISVIESIPKLLEQYVLLGEEVTYNTYYSDPETDPKYQERWIYQHDPNYFENSLGLAPFSGQYLSGPVTVFDKVGKYEVQFQARDNPKADNRFDNYRLWSYMPLNKLVLYVHRKPVASFTANLTPVGTASQTIIEDFEDTNYEFSFSGNWGRSTAQRYAGQYSYKSASISHSSTTSTQFTFTIPSGATNAKISFYYLVRSEANYDFFNFYINGNRLIHDSGYGSWKYFSYPLSPGTYTFKFEYTKDGSVNRYDDAAYVDNITVQHDGVITSYNVQLSSTSYDLDHQSEPGKGITQEEWKWKEVTATSWNSGKPSTLGVNKTYIVWLRVKDKEEAWSDPYVSVLSTMQVNLAPIAMFTVDPNTQVVNKTISISDMSYDPNGDPIAEWSWRVQKPDGTWINYGSTPPTNIPSLGVGTYTIELKVRDNPQFGTTLWSEPYTQQVTVIADNNKPVARFTISPNPVVADEPYTISDTSYDPDGDPIVAREWKVQKPDGTWVTINQWKPTFGDDGTYKIQLRVLDDPSRRHPALTPMWSDPYVVTVQVQGRLIVIGDSNKTTYKAGEAMILYARTEGKAYRVEARMWYPKNEFSSSNVTTLVPDTPLTSPPQDVMTWHTKHTKAEGRDVVVIIPKNMPDGNYQVVFTAYKQLAGGGTKTATDTITVRVKGTIYDHSKSQIIGPRF
SIO_010081: TOCE_RS02250
subclass of: SO_0000673
so part of: TOCE_RS02250
location: 433328..438799
location: region:433328-438799:1
so has part: feature:433328-438799:1:exon

WP_013275268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433328-438799:1:exon

TOCE_RS12250
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12250
so part of: sequence
location: complement(438966..439115)
location: region:438966-439115:-1
so has part: feature:438966-439115:-1:exon
subclass of: SO_0000010

position:438966:-1
position: 438966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439115:-1
position: 439115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438966-439115:-1:exon

TOCE_RS12250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATKEGPGQAEARGAGRDNWRGPAKGGAEAVYAHRGEADPLPELKAGML
SIO_010081: TOCE_RS12250
subclass of: SO_0000673
so part of: TOCE_RS12250
location: complement(438966..439115)
location: region:438966-439115:-1
so has part: feature:438966-439115:-1:exon

WP_187286583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438966-439115:-1:exon

TOCE_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02255
old locus tag: Toce_0443
so part of: sequence
location: complement(440956..441297)
location: region:440956-441297:-1
so has part: feature:440956-441297:-1:exon
subclass of: SO_0000010

position:440956:-1
position: 440956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441297:-1
position: 441297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440956-441297:-1:exon

TOCE_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02255
old locus tag: Toce_0443
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSLYSSLIAPMIQCDNRLAELKAAKYSWLDSEKIINYLKHCKESPLSDNPKAKRKIIETFVDKIIIHPDRIDTSLKINIKFETERGNLGGGEPCLTIPLSVEWKIIYSDNYV
SIO_010081: TOCE_RS02255
subclass of: SO_0000673
so part of: TOCE_RS02255
location: complement(440956..441297)
location: region:440956-441297:-1
so has part: feature:440956-441297:-1:exon

WP_013275270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440956-441297:-1:exon

TOCE_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: crcB
locus tag: TOCE_RS02260
old locus tag: Toce_0444
so part of: sequence
location: complement(441489..441854)
location: region:441489-441854:-1
so has part: feature:441489-441854:-1:exon
subclass of: SO_0000010

position:441489:-1
position: 441489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441854:-1
position: 441854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441489-441854:-1:exon

TOCE_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: crcB
locus tag: TOCE_RS02260
old locus tag: Toce_0444
inference: COORDINATES: protein motif:HMM:TIGR00494.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO process: GO:1903424 - fluoride transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fluoride efflux transporter CrcB
translation: MFLVGVGGIIGAISRFVLGKWITSKASSAFPFGTWIINISGSFILGILAVLHFNNAISEGLWLLFCTGFLGAYTTFSTFGYETILMLQKKDTRNAVIYISTSVLLGVIFAWIGGSITHIIL
SIO_010081: TOCE_RS02260
subclass of: SO_0000673
so part of: TOCE_RS02260
location: complement(441489..441854)
location: region:441489-441854:-1
so has part: feature:441489-441854:-1:exon

WP_013275271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441489-441854:-1:exon

TOCE_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: crcB
locus tag: TOCE_RS02265
old locus tag: Toce_0445
so part of: sequence
location: complement(441854..442255)
location: region:441854-442255:-1
so has part: feature:441854-442255:-1:exon
subclass of: SO_0000010

position:442255:-1
position: 442255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441854-442255:-1:exon

TOCE_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: crcB
locus tag: TOCE_RS02265
old locus tag: Toce_0445
inference: COORDINATES: protein motif:HMM:TIGR00494.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO process: GO:1903424 - fluoride transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fluoride efflux transporter CrcB
translation: MDVFAVGVGGFFGAIMRYLVGMWIPVTNSFPLGTLTINLLGCFFLAWFYTITEKRWHINPTLKLAIGTGFTGAFTTFSTFSVETLNLIKSNHLVMALIYVLLSILGGIGLAITGFKLATLTVQPSGGMEGELE
SIO_010081: TOCE_RS02265
subclass of: SO_0000673
so part of: TOCE_RS02265
location: complement(441854..442255)
location: region:441854-442255:-1
so has part: feature:441854-442255:-1:exon

WP_013275272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441854-442255:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 555079
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01734
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: fluoride
so part of: sequence
location: complement(442319..442379)
location: region:442319-442379:-1
so has part: feature:442319-442379:-1:region

position:442319:-1
position: 442319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442379:-1
position: 442379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442319-442379:-1:region

TOCE_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02270
old locus tag: Toce_0447
so part of: sequence
location: 443363..443683
location: region:443363-443683:1
so has part: feature:443363-443683:1:exon
subclass of: SO_0000010

position:443363:1
position: 443363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443683:1
position: 443683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443363-443683:1:exon

TOCE_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02270
old locus tag: Toce_0447
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRITAVIPRQDQVGALVDSLENMGFRRKDMIITDMVKSESKFEEDPDEIIDIKTEREGLGEKEPYTNAFSDRIKYGILVSVEVPEKNAARVMEIMEQNGAVEIIKE
SIO_010081: TOCE_RS02270
subclass of: SO_0000673
so part of: TOCE_RS02270
location: 443363..443683
location: region:443363-443683:1
so has part: feature:443363-443683:1:exon

WP_013275274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443363-443683:1:exon

TOCE_RS02275
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02275
old locus tag: Toce_0448
so part of: sequence
location: 443784..444704
location: region:443784-444704:1
so has part: feature:443784-444704:1:exon
subclass of: SO_0000010

position:443784:1
position: 443784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444704:1
position: 444704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443784-444704:1:exon

TOCE_RS02275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02275
old locus tag: Toce_0448
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYTTETKIINVWRIDIKPDIQREVDPVKLCLNEGIIGIGWRVYGRPTSKEDYWEKAKAIYAKDADWVRAATPFLFQMKEGDLVWIRDLMGIYYLGRIEGDWEYRDEPVYMQADIVNVRKCKLFKVGANVPGGVSNSFRTRGTVQGINDQTVNLFSRFVYNKLAGQEIYDTKHEIYGKRDIFSFLTETDLEDIVALFLQHEGYLLIPSSLSSRNDIPFYELQLIHRSTGELAFVQVKSANIVLNPDYYARFPHKIFLFSPAGYSTPSNPYEHVITLKRDDIEKFIFNFKHIMPAHVRLWLEYIEEVK
SIO_010081: TOCE_RS02275
subclass of: SO_0000673
so part of: TOCE_RS02275
location: 443784..444704
location: region:443784-444704:1
so has part: feature:443784-444704:1:exon

WP_013275275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443784-444704:1:exon

TOCE_RS02280
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02280
old locus tag: Toce_0449
so part of: sequence
location: 445002..446522
location: region:445002-446522:1
so has part: feature:445002-446522:1:exon
subclass of: SO_0000010

position:445002:1
position: 445002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446522:1
position: 446522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445002-446522:1:exon

TOCE_RS02280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02280
old locus tag: Toce_0449
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778573.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cobyric acid synthase
translation: MGAKCIMIQGTGSSVGKSRIVTGLCRILKEDGFKVAPFKAQNMALNSYITREGLEIGRAQATQAEACGLEPSVLMNPVLLKPTSDKNCQVIIRGKVYGNLSAMDYHEFKAKLKKVVTETYEELKSQYDVIVIEGAGSPAEINLRENDLVNMGMAEIADAPVVLVGDIDKGGVFASLYGTIMILEEKERERIKGVIINKFRGDIKLLEPGIKMLEDLIKRPVLGVVPFDHSYIDEEDNPGFEMYRLKLKGSREGVVIKILLLPHISNFTDFVPLSNFENASIEYVRPGQSIGDADAVIIPGTKNTIGDFIKVREWGWDGEIKELAKKGTVIMGICGGFQMLGKLIKDPHGVEGDIREIEGIGLLDVETELLGEKVTKKAAGHVLEHEKGLAAYLSNSPFEGYEIHMGRTLNRGGSNFSMIKRKGEDEHLPDGAVDETGNIIGTYVHGIFESGEFTKRFMNYLCERKGLKQAGGNIDFRRFKEEQFNNWAKILRQCLNMDEIYRIIGL
SIO_010081: TOCE_RS02280
subclass of: SO_0000673
so part of: TOCE_RS02280
location: 445002..446522
location: region:445002-446522:1
so has part: feature:445002-446522:1:exon

WP_013275276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445002-446522:1:exon

TOCE_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: oxlT
locus tag: TOCE_RS02285
old locus tag: Toce_0450
so part of: sequence
location: complement(446665..447951)
location: region:446665-447951:-1
so has part: feature:446665-447951:-1:exon
subclass of: SO_0000010

position:446665:-1
position: 446665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447951:-1
position: 447951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446665-447951:-1:exon

TOCE_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: oxlT
locus tag: TOCE_RS02285
old locus tag: Toce_0450
inference: COORDINATES: protein motif:HMM:TIGR04259.1
GO function: GO:0015297 - antiporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxalate/formate MFS antiporter
translation: MTTSTPQTSDRKGVYGSFIWNTWTQLILAMIGMIMIANLQYAWTLFVPELEKGFNASRAAVQLAFSLFIALESWGQPIAGYFIDRYSPRLLLTIAALMVGIGWTAMGIVKTLSALYVAYSLAGIGAAFIYSGAVAAGVRWFEPSRRGLASGLVSAAFGSGAALFIPFIAMALRNQGYASAFVTTGIIQGILIFIAAQLMRVPPKKPASGAKADTSTEQHQFTTLEMFRTLHFWLIYIMFLFIVTGGMVVTAQTKPFGQDAGIPAGIIVLAATVNTVANGAGRIFWGSVSDKLGRYQTMFLAFTLNGVAMALVPFLGQSPAMFVFLFALIMFTWGELYALFPAVNADIFGTKYAATNYGFMYSAKGVGGIVGSYVAALVAQLSGWSPVFFTGAAMSALAGLGALVLLRLPRPVPPNTKKVDTGASTPVH
SIO_010081: TOCE_RS02285
subclass of: SO_0000673
so part of: TOCE_RS02285
location: complement(446665..447951)
location: region:446665-447951:-1
so has part: feature:446665-447951:-1:exon

WP_013275277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446665-447951:-1:exon

TOCE_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02290
old locus tag: Toce_0451
so part of: sequence
location: complement(448122..449069)
location: region:448122-449069:-1
so has part: feature:448122-449069:-1:exon
subclass of: SO_0000010

position:448122:-1
position: 448122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449069:-1
position: 449069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448122-449069:-1:exon

TOCE_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02290
old locus tag: Toce_0451
inference: COORDINATES: protein motif:HMM:NF014794.2
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine pyrophosphate-dependent enzyme
translation: MLEPITSLRKAPEEEYYLPGHRTCAGCGPALCYRLVAKAAGPNTIFVGPTGCMYVANTSYGCGPWRVPWIHAQITNGGAVASGIEAAYKALIRKKKTDAEFPNIIVMAGDGGAVDIGLQALSGMLYRGHDVLFICYDNESYANTGIQTSPTTPYGAATTFTPPGPVVPEGKKLFPKDNPKVVAHGHPELKYVATASIGWPVDLMNKVRKGLNQKGPAYLHIHAPCPKGWQFPANKTIEMAKLAVETGMFQLYEYENGEYKLSVKIEKRKPVSEYMRLQGRFKHLKPEHIEKMQAFIDARCAEVGLTVPVVTPKAK
SIO_010081: TOCE_RS02290
subclass of: SO_0000673
so part of: TOCE_RS02290
location: complement(448122..449069)
location: region:448122-449069:-1
so has part: feature:448122-449069:-1:exon

WP_013275278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448122-449069:-1:exon

TOCE_RS02295
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02295
old locus tag: Toce_0452
so part of: sequence
location: complement(449095..450282)
location: region:449095-450282:-1
so has part: feature:449095-450282:-1:exon
subclass of: SO_0000010

position:449095:-1
position: 449095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450282:-1
position: 450282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449095-450282:-1:exon

TOCE_RS02295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02295
old locus tag: Toce_0452
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013275279.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate ferredoxin oxidoreductase
translation: MGKVKNISGCVAVANGVRLADVDVICSYPIRPYTGIMSELARMVADGELDAEFVHGEGEHAQLSVVYGASAAGARVFTGSSGVGVTYAFEVYSPISGERLPVQMAIADRTLDPPGDFGSEHTDAECCRDQGWIQGWASTPQEALDNTLIFYRVGEDPRVLLPQFACLDGYFVSHILGPVDIPEPEQVKEFLPPYKNHHVLDPRKPQIIGPQIEPAMGPPLQYQRYQVMKNVFKVLEEACDDFARIFGRRYDPYMEEYYTGDAEVVIFGQGAHMETVKAVVKRLRNLGEKVGAVRLRTFRPFPTEQVKERLSRFKAVGVLDNSSNFGISGGGGVLLSEVRTALYDFGDKVKTVGFVAGLGGEVITHDEFYRMFQKLKEIAKTGKVEKTAYWLPFEL
SIO_010081: TOCE_RS02295
subclass of: SO_0000673
so part of: TOCE_RS02295
location: complement(449095..450282)
location: region:449095-450282:-1
so has part: feature:449095-450282:-1:exon

WP_013275279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449095-450282:-1:exon

TOCE_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02300
old locus tag: Toce_0453
so part of: sequence
location: complement(450303..451250)
location: region:450303-451250:-1
so has part: feature:450303-451250:-1:exon
subclass of: SO_0000010

position:450303:-1
position: 450303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451250:-1
position: 451250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450303-451250:-1:exon

TOCE_RS02300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02300
old locus tag: Toce_0453
inference: COORDINATES: protein motif:HMM:NF013707.2
GO function: GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-oxoacid:acceptor oxidoreductase family protein
translation: MSSNELFLEPNLKQVTVWSRGVIMNKDARDVVVALTEAAAKEGKYVQAWENYVDLPDRINVPVRAYARISSDPIASRYVYENEAPDIVVVLEETLVKGVPVLKGIKPGATLVVNTKRSIDSILKFLGDTGNLGQIATVDASSMAEAVVTLSGSEGATDATGIGAGIAAPIAGAVARVTGIVDVENLAQVVKNPAAMRRGYEEVQVRKLEVRPVARESQTTAKELLKQMPFAGTVPSPQEENEGMVTGNWRMKRPILNTEACTQCWTCWIYCPDTCIKKGEDGPLFNLKYCKGCGLCAAVCPTGAITEVPELDFED
SIO_010081: TOCE_RS02300
subclass of: SO_0000673
so part of: TOCE_RS02300
location: complement(450303..451250)
location: region:450303-451250:-1
so has part: feature:450303-451250:-1:exon

WP_013275280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450303-451250:-1:exon

TOCE_RS02305
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02305
old locus tag: Toce_0454
so part of: sequence
location: complement(451422..453548)
location: region:451422-453548:-1
so has part: feature:451422-453548:-1:exon
subclass of: SO_0000010

position:451422:-1
position: 451422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453548:-1
position: 453548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451422-453548:-1:exon

TOCE_RS02305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02305
old locus tag: Toce_0454
inference: COORDINATES: protein motif:HMM:TIGR01243.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDC48 family AAA ATPase
translation: MSAEKSLQFRVCEAEIQDARKGIVRIPAEALKALELNPNDVVAITGKRTTVARVLPGFPESCPAGCIQMDGIVRQNAAAGIGEIVVVTPIECERAKAVVLSPLLPVWQGAEKGSAFLKKSILGRVVIVGDQITISQFSGGDEAFMVEGTAPQGAVVITRDTIVRFKGADNTDSSRGGVTYEDIGGLAKEVKKIREIVELPLKYPQLFNRLGIEAPKGILLYGPPGTGKTLIARAIASETEAHFLLVNGPEIMHKYYGESEARLRQVFDEAKKKAPSIIFLDEIDAIAPRRTEVYGDVEKRVVAQLLALMDGLEARGNVIVLAATNVPDLIDPALRRPGRFDREILIDVPDQRGRKEILAIHTRGMALAEDVSLEYLAAITHGFVGADLAALCREAGMHALQRVLENLPPGFPPPVELDLKVTMRDFISALDEVEPSATREFAAELPTARWEDIGGMTAIKERLQALVQWPLTHPELFKQFGLRPPKGILLYGPPGTGKTLMVRALAGESGINFIPVNGSLLFSRWRGQAEKILHEVFRKARQASPCLLFFDELDALVPVRRGGEETAGRLVSQFLLEFDALEEMREVVVIGATNRIDLIDPALLRPGRFDEVLEFPYPDESDRQAIFGIHLGARPLAADVDLELLALQSEGLTGAEIEAVCRRAAFMAAAEFASRSDASKESGAIRRQHLERALEEVRKKRDLIPVKG
SIO_010081: TOCE_RS02305
subclass of: SO_0000673
so part of: TOCE_RS02305
location: complement(451422..453548)
location: region:451422-453548:-1
so has part: feature:451422-453548:-1:exon

WP_148218368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451422-453548:-1:exon

TOCE_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02310
old locus tag: Toce_0455
so part of: sequence
location: 453829..454269
location: region:453829-454269:1
so has part: feature:453829-454269:1:exon
subclass of: SO_0000010

position:453829:1
position: 453829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454269:1
position: 454269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453829-454269:1:exon

TOCE_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02310
old locus tag: Toce_0455
inference: COORDINATES: protein motif:HMM:NF024854.2
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family winged helix-turn-helix transcriptional regulator
translation: MEDRGSHYLRELIRMLVRNLGVLEKSEASCCGTTLSQCHTIVEIGRAGEISLNELAELLNLDNSTISRSVNNLVKQGLVVRETDPEDRRYVRIRLTKEGYGVYEAVESSMEAYFERIFTTIPEEKREQVLESLQILIDAVRKNKCC
SIO_010081: TOCE_RS02310
subclass of: SO_0000673
so part of: TOCE_RS02310
location: 453829..454269
location: region:453829-454269:1
so has part: feature:453829-454269:1:exon

WP_013275282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453829-454269:1:exon

TOCE_RS02315
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02315
old locus tag: Toce_0456
so part of: sequence
location: complement(454327..455955)
location: region:454327-455955:-1
so has part: feature:454327-455955:-1:exon
subclass of: SO_0000010

position:454327:-1
position: 454327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455955:-1
position: 455955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454327-455955:-1:exon

TOCE_RS02315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02315
old locus tag: Toce_0456
inference: COORDINATES: protein motif:HMM:TIGR00241.1
GO function: GO:0008047 - enzyme activator activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-CoA dehydratase activase
translation: MIGYVCKYTPVEIIEALGEEPVRLDSACKSYERAEALIHSNICSFAKGVLENIIENNIEEVVLTSCCDSMRRLYDVLKDRVKFIYMLDLPRKKDSLAVDLFYNEITKFIDVYKEFKNRTFVEENLLKILEGKSSSKKKQPSESIAILGARLKDDVVEKIKNSSKANIINYTCTGEERMFNIEAKDNLLKGYAESLLDLTPCMRMAEDRSKLTNKEFKGIIYNTIKFCDFYSYEYAELKNKVDIPLLKIETDYTDSNSGQILTRVDAFLESTGIKKVEKKGAQKGYFAGIDSGSTSTNAVIIDENKNIISYSIIPTGPRAVESASKAFEIALNNAGLSKKDIASIVATGYGRVSIPFADRIVTEITCHGKGAFFIDNAIRTVIDIGGQDSKVIRLDDSGNVVDFVMNDKCSAGTGRFLEVMARTLGVPIDEMAKVHKEVKENITITSMCTVFAESEVISLIAQNKDQRDIIYALNKAVASKAVSLVERIGRKGKYMMTGGVAKNWGVVHAIESKLGEKLIIPPEPQIIGALGAALISLEGKLG
SIO_010081: TOCE_RS02315
subclass of: SO_0000673
so part of: TOCE_RS02315
location: complement(454327..455955)
location: region:454327-455955:-1
so has part: feature:454327-455955:-1:exon

WP_013275283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454327-455955:-1:exon

TOCE_RS02320
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02320
old locus tag: Toce_0457
so part of: sequence
location: complement(455981..457231)
location: region:455981-457231:-1
so has part: feature:455981-457231:-1:exon
subclass of: SO_0000010

position:455981:-1
position: 455981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457231:-1
position: 457231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455981-457231:-1:exon

TOCE_RS02320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02320
old locus tag: Toce_0457
inference: COORDINATES: protein motif:HMM:NF017828.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-hydroxyacyl-CoA dehydratase family protein
translation: MDPVRMYSNIIKRNMKKSEKVNKLINFGLTVAYYYVSFFKDKRLPKSLQYLNKCCIKNIKDSLENPQNSAWVNLFSPCEFLIAMDIRPLFVEAYSSFMSGFFIEDYLIDTAESRGISNTLCSYHKTFIGANELNILKKPGFMITTSMICDANIPTFRYLSRKTGVPLYIIDIPYRYSKEAVAYVENQLVEMVKRLEEAYKRRLDIDKLREVVKTENKTRALMNEYLNYAAEKALLTTMTFEMYMLFASHVFIGSREMLNFYEMLIDDIKKAPERRGKSIFFVHLLPMFEKNFKDYFNFSDKFHIAGSDINYDFLGEIDENEPFRGIAEKLVLTSFNGEINRKVTRIRELIEKTKPDGIIQFCHLGCKQSIGGTFIIKNLASEMGIPFLYLDGDCVDKRNNQEGQNRTRLEAFLEML
SIO_010081: TOCE_RS02320
subclass of: SO_0000673
so part of: TOCE_RS02320
location: complement(455981..457231)
location: region:455981-457231:-1
so has part: feature:455981-457231:-1:exon

WP_041424010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455981-457231:-1:exon

TOCE_RS02325
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02325
old locus tag: Toce_0459
so part of: sequence
location: 457771..458964
location: region:457771-458964:1
so has part: feature:457771-458964:1:exon
subclass of: SO_0000010

position:457771:1
position: 457771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458964:1
position: 458964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457771-458964:1:exon

TOCE_RS02325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02325
old locus tag: Toce_0459
inference: COORDINATES: protein motif:HMM:NF014567.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sensor histidine kinase
translation: MVFFAEIYFYPFEGKFKFSAGVIILNLIILAVDNVSKFWIVILSGLAIFAVRTAVLFFQGISFDTALAVNYPSLVYYVIFAFLVKISDVDKRKNYVFGAIMLLSLVDFSSNLFEAAIRNEISPSGVQLILMVGFLRSILAYFIYQLYERQKLFILSSEHQKRYTQLNMLISNIQAEMFYLKKSMKDIENVMRKSYSLYESNELDGKLKEMALDIAKDVHEIKKDYYRVVLGFESFIKGLENEDVMKLSDIFTIIRDNIERYLKAKNKEIKIFFNCGSDFSVGPYYNMFNLLNNLLTNSIDACKSGDTIAVSVTNLEENVCLEVRDSGEGIEEDILPYIFNPGFTTKYDEDTGRPHTGIGLCHVKNIVEELGGSIEVTSKPGVGTKFKILIPKKSLVR
SIO_010081: TOCE_RS02325
subclass of: SO_0000673
so part of: TOCE_RS02325
location: 457771..458964
location: region:457771-458964:1
so has part: feature:457771-458964:1:exon

WP_245523162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457771-458964:1:exon

TOCE_RS02330
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02330
old locus tag: Toce_0460
so part of: sequence
location: 458969..459856
location: region:458969-459856:1
so has part: feature:458969-459856:1:exon
subclass of: SO_0000010

position:458969:1
position: 458969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459856:1
position: 459856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458969-459856:1:exon

TOCE_RS02330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02330
old locus tag: Toce_0460
inference: COORDINATES: protein motif:HMM:NF020248.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding domain-containing protein
translation: MDKTFMIIDDDVNVRKMLAILIRKNRLGKVLTELDSGKHAAQEILFFNPDIVLIDLLLPAMDGIEVINEARSKGYKGKFIMISQVEDENMVAKAYESGILFFINKPINNIEVVSVIKGVCRIIDLENSLALIKNTVMNYDAENHKIKDTNDKNIETRINKIFSDLGIIGVAGSNELLKVIYTVHELKLENPNAEYQLQDIYEKVLEEDDDNIEKLNVKSLEQRVRRTIQKALQTLAELGLSDFDNDIFLEYSTLLFDFKQVRQQMRHIENPKEEPGKINIKKFIEGIIAKLRYSQ
SIO_010081: TOCE_RS02330
subclass of: SO_0000673
so part of: TOCE_RS02330
location: 458969..459856
location: region:458969-459856:1
so has part: feature:458969-459856:1:exon

WP_013275287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458969-459856:1:exon

TOCE_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: gltS
locus tag: TOCE_RS02335
old locus tag: Toce_0461
so part of: sequence
location: 460000..461205
location: region:460000-461205:1
so has part: feature:460000-461205:1:exon
subclass of: SO_0000010

position:460000:1
position: 460000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461205:1
position: 461205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460000-461205:1:exon

TOCE_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: gltS
locus tag: TOCE_RS02335
old locus tag: Toce_0461
inference: COORDINATES: protein motif:HMM:TIGR00210.1
GO function: GO:0015501 - glutamate:sodium symporter activity [Evidence IEA]
GO process: GO:0015813 - L-glutamate transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium/glutamate symporter
translation: MTVQLDMLQTTALAVIVLFLGELIRNKAPILKKYCIPSPVIGGLFFAVLFLVLKQYNILTITFDTTLQTFFMNMFFTTVGFTASLRLLKKSGIPVLVFLTISIVLIFLQNGLGIALAKVFNLNGLLGLATGSIPLVGGIGTSGAFGPLLEKAGAEGATTVAVAAATFGMIMGSIIGNPLAKNLIEKHGLMKNHKTAAFEPGLSAELAVSDEVGEVKAENFYPAFAQILLAMGIGTIISSFFTKVGFTFPPYIGAMFAAAIIRNLADFTGMYKVPEDEIKVVGDISLSIYLAIALMGLKLWQLADLALPLVVMLVAQTILMMLMAYFITFNLMGRDYEAAVLTSGFCGFGMGATSNAMANMRALVEQYAPAPRAFFIVPLVGSLFIDFFNGILIVVFMNMIK
SIO_010081: TOCE_RS02335
subclass of: SO_0000673
so part of: TOCE_RS02335
location: 460000..461205
location: region:460000-461205:1
so has part: feature:460000-461205:1:exon

WP_013275288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460000-461205:1:exon

TOCE_RS02340
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02340
old locus tag: Toce_0462
so part of: sequence
location: complement(461246..462754)
location: region:461246-462754:-1
so has part: feature:461246-462754:-1:exon
subclass of: SO_0000010

position:461246:-1
position: 461246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462754:-1
position: 462754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461246-462754:-1:exon

TOCE_RS02340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02340
old locus tag: Toce_0462
inference: COORDINATES: protein motif:HMM:NF014049.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF92 domain-containing protein
translation: MKDFIGVVISILFVFGVIIISEVLRKAGGSSAEVTRKFVHIGVSHWWPLAMFLIDDIRYALIPPALFVAVNYYSHKKNVFKGMERKGASSDLGTVYFPVSLIVLILLTWDGGLLGRGFEYLGLAGVLAMGYGDGLAAIVGWKFGKSKYRAFKSEKSLEGSVTMLAFSFIAIAVALGSFLGFTPHVLRVSFVAALIATISEALSPSGTDNLTVPVVTSLASNYFLYILKNSNLFLFIYMAGIGFVLSFFIAYAAYRKNSLTLDGSVGATILGTMMYATSGIFGSFLMVLFFISSSLLSYFKKSAKSRATQSFDKTGCRDVFQVLANGGVGLLYSVLYYITKNPSYLVLLAVSFAAANADTWATELGILSKARPISLRTFRRVEKGTSGAVSLSGTLAALMGALLIGISAAAGFKLMDFGDLAFTPVQSLLMVTLGGFLGSLIDSILGATLQGVYYSEELEGETEKRFTNGKPNRLVRGLGFVNNDLVNFLSIGLSSALFAGII
SIO_010081: TOCE_RS02340
subclass of: SO_0000673
so part of: TOCE_RS02340
location: complement(461246..462754)
location: region:461246-462754:-1
so has part: feature:461246-462754:-1:exon

WP_013275289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461246-462754:-1:exon

TOCE_RS02345
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02345
old locus tag: Toce_0463
so part of: sequence
location: 462907..464118
location: region:462907-464118:1
so has part: feature:462907-464118:1:exon
subclass of: SO_0000010

position:462907:1
position: 462907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464118:1
position: 464118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462907-464118:1:exon

TOCE_RS02345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02345
old locus tag: Toce_0463
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777694.1
GO function: GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase IV
translation: MLSILHVDMNAFYASCHQALDPSLKGKPVIVAGDPKKRNGIVLTASYEARKFGVKTAMPNWQARKLCPHAVFIKPDYRLYVATSHRVLEILQRFSPVVEVFSIDEAWLDVTGCEGLFGDAVTIAEKIQRTVIEELSLPCSVGVSCNKLLAKMASDMKKPMGITVITPEDVPDVIWPLPVDELFGVGPRLAERLKKMNINTIGDLAAVPVEMLEAAFGLVGRHIHLFANGIDDSPVDPHSMDDARSMGHSITLPRDVETWDEAEAVLLSLAEQVGRRVRRGNYVGRVVTVTLRDSSFSTITRSTTIPHTSATEDIYAAAKRLLRSNWDGRTPLRLLGVSLSGLIREFDQISVFEADEKKKRLNRVIDEIRERFGDNAIFRAKLKSRDLIGQKGSPAIGPFARRN
SIO_010081: TOCE_RS02345
subclass of: SO_0000673
so part of: TOCE_RS02345
location: 462907..464118
location: region:462907-464118:1
so has part: feature:462907-464118:1:exon

WP_013275290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:462907-464118:1:exon

TOCE_RS02350
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02350
old locus tag: Toce_0464
so part of: sequence
location: 464189..464971
location: region:464189-464971:1
so has part: feature:464189-464971:1:exon
subclass of: SO_0000010

position:464189:1
position: 464189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464971:1
position: 464971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464189-464971:1:exon

TOCE_RS02350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02350
old locus tag: Toce_0464
inference: COORDINATES: protein motif:HMM:NF014017.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF72 domain-containing protein
translation: MILVATSGYAYKDWKGRFYPENMKDGDMLAFYSREFPFTEVNSSYYSMPTPYMFYHMMKKTPGNFIFVVKAYGGMTHQRDLGDITVGRFHDALKPLVEAGRLGCVLAQFPYSFHNNEKNRDYLKKLRERMKDLPLAVEFRSDDWLRLEVIRLLRENDMAFVCVDEPPIRGLLPPVVVATSSIGYVRFHGRNIRKWYNHEKSYERYDYLYTEMELSEWVPRIRELSRKTKVVFIAMNNHFNASAVINARQLLGLLKEAGNI
SIO_010081: TOCE_RS02350
subclass of: SO_0000673
so part of: TOCE_RS02350
location: 464189..464971
location: region:464189-464971:1
so has part: feature:464189-464971:1:exon

WP_013275291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464189-464971:1:exon

TOCE_RS02355
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02355
old locus tag: Toce_0465
so part of: sequence
location: complement(465027..465479)
location: region:465027-465479:-1
so has part: feature:465027-465479:-1:exon
subclass of: SO_0000010

position:465027:-1
position: 465027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465479:-1
position: 465479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465027-465479:-1:exon

TOCE_RS02355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02355
old locus tag: Toce_0465
inference: COORDINATES: protein motif:HMM:NF013440.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GreA/GreB family elongation factor
translation: MQRTYTLSKTAFEALIKHLADLEAGKSRLIDEHFSNSPREARELEHLLDNYIKFMDEFISSVQQEDTADESFPYVVINSRVQVQDIENDETYNFRVVLPSGNIASDPEIYSVSVLSPVGKSLLLKKPGEKVQVNAPGGMFLYEIKAIYFP
SIO_010081: TOCE_RS02355
subclass of: SO_0000673
so part of: TOCE_RS02355
location: complement(465027..465479)
location: region:465027-465479:-1
so has part: feature:465027-465479:-1:exon

WP_013275292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465027-465479:-1:exon

TOCE_RS02360
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02360
old locus tag: Toce_0466
so part of: sequence
location: complement(465633..466607)
location: region:465633-466607:-1
so has part: feature:465633-466607:-1:exon
subclass of: SO_0000010

position:465633:-1
position: 465633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466607:-1
position: 466607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465633-466607:-1:exon

TOCE_RS02360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02360
old locus tag: Toce_0466
inference: COORDINATES: protein motif:HMM:NF019121.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-grasp domain-containing protein
translation: MKVGVFWRKFRNVELQLKLSGENIYDDAYEEAYQHFSAIKEAGFDAVMIEWKKDNPQETLRKVLEEKVDLVFNASSLEEVAFLEAFGIPFAGSGLDLVATDKATRKKIVAYHKLPTPRFIVVEDPNEIPDHDLKYPLFVKPVRGRGSAGISEENIIERHEDLARVVSKITDKIGQPALVEEFIRGREITVGIIGYKNPRVLPPVEIEYNSTRTNTFEHKMFDNEIIHCPARLSPEEEEKVKSTALSIYKVLNAKDFSRIDMILGDDGIPYFLEINTFAGLTMSKDGTHHGYMGYMAKTAGMTRADFIGSIVRSALERYRICHKL
SIO_010081: TOCE_RS02360
subclass of: SO_0000673
so part of: TOCE_RS02360
location: complement(465633..466607)
location: region:465633-466607:-1
so has part: feature:465633-466607:-1:exon

WP_013275293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465633-466607:-1:exon

TOCE_RS02365
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02365
old locus tag: Toce_0467
so part of: sequence
location: 466863..467849
location: region:466863-467849:1
so has part: feature:466863-467849:1:exon
subclass of: SO_0000010

position:466863:1
position: 466863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467849:1
position: 467849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466863-467849:1:exon

TOCE_RS02365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02365
old locus tag: Toce_0467
inference: COORDINATES: protein motif:HMM:NF006379.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ornithine cyclodeaminase family protein
translation: MLILTKSDVEKALSMEEAINAMEEAFAAYSTGRTIVPLRTVIHIGGAEGDALFMPGYVEGIGVAVKLVSVFPGNARFGKPTISSVVVLEDRETGEPVALMDGAYLTALRTGAASGAASKHLARKDSKVAAVIGAGVQGKTQLWAVCCVRNIEEARIYNRDPKKVGQYIAEMKTKLSGVRFVECQSADEAVRGADIIIAATTSETPVFSASSVKKGAHINAIGSYTPKMQEIPTELLKMASKIVVDSREAVLSEAGDFIIPISSGDFSPENIYGELGEITSGRLRGRESDDEITLFKSVGIAVQDVACAARIYEKAVKMGLGIKIDLSN
SIO_010081: TOCE_RS02365
subclass of: SO_0000673
so part of: TOCE_RS02365
location: 466863..467849
location: region:466863-467849:1
so has part: feature:466863-467849:1:exon

WP_013275294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466863-467849:1:exon

TOCE_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02370
old locus tag: Toce_0468
so part of: sequence
location: 467871..469514
location: region:467871-469514:1
so has part: feature:467871-469514:1:exon
subclass of: SO_0000010

position:467871:1
position: 467871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469514:1
position: 469514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467871-469514:1:exon

TOCE_RS02370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02370
old locus tag: Toce_0468
inference: COORDINATES: protein motif:HMM:NF012245.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MKKKVILKLVLPISLLPAILLLAAYLAAGISLRVHLVPILAVTGLVLFINYFVINSAFIKLRILAEVISEFSRGEIPSFEKLHRNGGLFDFLVEPVLKAFEHVFTLMGRMQRTAEEIKYFSGKFEDSMDQISHAAHQISASIEEIALGAGEQAEAAQETSNNINTLSALAEKIAGEAREGEEGIKAMVERVRETRGVLEGLISNLSLSSQTSSLSASKMRDLENLTTMINGFVKVITDIADQTNLLALNAAIEAARAGEQGRGFAVVAGEVRKLAEQSAKAAEEIKELSERIQKEARETALQVEKNLEVVNENIEKGNESMTAFDDIVSAIKSFEVSIERINRMAGEQVEKVVKVSEAAEKMAAVSEETAAGVQEIAASSQEQKNLLGAISEETGRLSTMSSELMEISEAYTRNYRIPESARVKLSAIKQQLSLLAGKDFVVNRDVEVLKREFEKVKRETPEILELITLDEKGDIIYVTSDIPVKNLAFRPWFQEAVRGNEFISKPYIDISANRMTVTISVPVRNEEGSVVGVIGADVNLNKTLNLL
SIO_010081: TOCE_RS02370
subclass of: SO_0000673
so part of: TOCE_RS02370
location: 467871..469514
location: region:467871-469514:1
so has part: feature:467871-469514:1:exon

WP_013275295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:467871-469514:1:exon

TOCE_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02375
old locus tag: Toce_0469
so part of: sequence
location: complement(469564..471573)
location: region:469564-471573:-1
so has part: feature:469564-471573:-1:exon
subclass of: SO_0000010

position:469564:-1
position: 469564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471573:-1
position: 471573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469564-471573:-1:exon

TOCE_RS02375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02375
old locus tag: Toce_0469
inference: COORDINATES: protein motif:HMM:NF014763.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MKKLKGIKISGGIRTRLTVLFLLISLVPLIVLSFFNYSTSKNNLTHAADRELLGKAVSAASVIDLWVSERMEILETLAENPVIKSGNLESLIPILKTVQPAAPDVQLLWYATPDGKVYSYLNDDITKPITDINDRQYFKEIMSTGKTTVSELVIDKVTGDKILVIVAPVKGQGGITGIVGADVNANALINIINSVKYGTTGYAFLVDKMGTTIAHPDEKMVMNMNITKTESESLNRVGERMIKGEEATVRYEYSGEYKLAAFSPVKNTGWSLCVTASSDEVYAGLKSFFWSTITLILVVTVIVIAAAVVFSRQLSSPILKLTAVADTLATGDLRVEVPEGFFGELGTLGSSLKKMLENTKTVLGFMGTAIANLEKAIREISQGAQDTAQAAEQVAETVSQISAGAQDMAQNTGNISAAVEDTTTMMQALVENLESITQNTMDTVKRTEQGEKIMKELSQKLELTTTKAENIKSAMTSLIEQAKEIAGITDVITGIAEQTNLLALNAAIEAARAGEAGRGFAVVAEEIRKLAEQSSQQASQITKIVKQVTENINLSNTATEEAVVLIEEQAIIGGETMNHFAEISAGARRVADLLSDIEKKARSVSEHSRKISEEVSNAAAISEENAASSQEIAASAQEMSSAAQTISASTTELINLVEKLKEASAKFIL
SIO_010081: TOCE_RS02375
subclass of: SO_0000673
so part of: TOCE_RS02375
location: complement(469564..471573)
location: region:469564-471573:-1
so has part: feature:469564-471573:-1:exon

WP_013275296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469564-471573:-1:exon

TOCE_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02380
old locus tag: Toce_0470
so part of: sequence
location: complement(471551..472027)
location: region:471551-472027:-1
so has part: feature:471551-472027:-1:exon
subclass of: SO_0000010

position:471551:-1
position: 471551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472027:-1
position: 472027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471551-472027:-1:exon

TOCE_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02380
old locus tag: Toce_0470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778315.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheW
translation: MRQVVVFGLGKELYGIDIFDLQEIIRMMEITHIPRAPHFIEGVINLRGRIIPVIDLKKRFGLADGEITRDSRIIVVNIDETTAGLIVDYVTEVAALEEEDLEKPPEALTIDARFIHGLAKMGDNIVILIKTSEILNVAEKDQLKNFSKEDTYEKAEGN
SIO_010081: TOCE_RS02380
subclass of: SO_0000673
so part of: TOCE_RS02380
location: complement(471551..472027)
location: region:471551-472027:-1
so has part: feature:471551-472027:-1:exon

WP_013275297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471551-472027:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 555079
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01051
inference: COORDINATES: profile:INFERNAL:1.1.4
note: cyclic di-GMP riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: cyclic di-GMP
so part of: sequence
location: complement(472131..472224)
location: region:472131-472224:-1
so has part: feature:472131-472224:-1:region

position:472131:-1
position: 472131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472224:-1
position: 472224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472131-472224:-1:region

TOCE_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02390
old locus tag: Toce_0471
so part of: sequence
location: 472500..472904
location: region:472500-472904:1
so has part: feature:472500-472904:1:exon
subclass of: SO_0000010

position:472500:1
position: 472500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472904:1
position: 472904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472500-472904:1:exon

TOCE_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02390
old locus tag: Toce_0471
inference: COORDINATES: protein motif:HMM:NF033749.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bacteriohemerythrin
translation: MAVMWTEDLSTGVSLIDEQHKELFKRVNDLLLACSKGKGREEAVKAIDFLGEYIVMHFGAEEKYMRENDFPGYQAHKKQHDGFVAEFKEIKQRMEQNGPTVDLVVKINHFLIDWLINHIKKTDKALGAFLKNKI
SIO_010081: TOCE_RS02390
subclass of: SO_0000673
so part of: TOCE_RS02390
location: 472500..472904
location: region:472500-472904:1
so has part: feature:472500-472904:1:exon

WP_013275298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472500-472904:1:exon

TOCE_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02395
old locus tag: Toce_0472
so part of: sequence
location: 473105..474145
location: region:473105-474145:1
so has part: feature:473105-474145:1:exon
subclass of: SO_0000010

position:473105:1
position: 473105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474145:1
position: 474145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473105-474145:1:exon

TOCE_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02395
old locus tag: Toce_0472
EC number: 3.1.1.61
inference: COORDINATES: protein motif:HMM:NF001965.0
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]; GO:0050568 - protein-glutamine glutaminase activity [Evidence IEA]
GO process: GO:0006935 - chemotaxis [Evidence IEA]; GO:0018277 - protein deamination [Evidence IEA]; GO:0006482 - protein demethylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis response regulator protein-glutamate methylesterase
translation: MIRVLVADDSALMRLIIKDLLEKDPEIKVVDTAGNGREAVEKAERLKPDVITLDVNMPEMDGLSALKKIREKKLGNVLMLSSLTREGASVTIKALELGAFDFVAKPGGSISPDIKEFADEIIAKVKAGYNARDIRERPVNPPAPGIHFTSEMKAVVIGISTGGPRNIMHVLPFIPPDINAAIFLVQHMPPGFTGPLARRLDERCALKVVEAEDGMEVKPGTCYVGKGGYNMLLSSERNGFRLVVTDTPKYRFMPSADVTMDSVLTIFRENTIGVLMTGMGDDGAGAMVRIRKAGGRTIAESKETAVIFGMPRAAIERGGAEFILPSYEIPAKITELTGVRRLNAKE
SIO_010081: TOCE_RS02395
subclass of: SO_0000673
so part of: TOCE_RS02395
location: 473105..474145
location: region:473105-474145:1
so has part: feature:473105-474145:1:exon

WP_041423831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473105-474145:1:exon

TOCE_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02400
old locus tag: Toce_0473
so part of: sequence
location: 474132..475574
location: region:474132-475574:1
so has part: feature:474132-475574:1:exon
subclass of: SO_0000010

position:474132:1
position: 474132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475574:1
position: 475574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474132-475574:1:exon

TOCE_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02400
old locus tag: Toce_0473
EC number: 2.7.7.65
inference: COORDINATES: protein motif:HMM:TIGR00254.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diguanylate cyclase
translation: MQKSDGVTVDFLKTLLDSINVNLCVIGESGEILLVNKRWEEFALKNGIDNVGTVGPGVNYLEVLENAVRNEHTDSEVARAAREGIREVLEGKSEGFYLEYPCRSESEDRWYLMVVSRIDWDPVAAAICHINITETKRKQVQLRLNIYDELTGLYNRWMFRKELKKLRRTDELPAAVIVYDLDGLKLITDVLGSEAGDKLLKAFADILKSSCREKDVVARIGGDEFGIIMRGCDEKIVDSFIKRIMAKIENFNSKNEDLHLSASFGYSVKHHGFQDIYKVFNEARCNMYTNKLLKRRSAKNAIARIITRKLQERNRAREERIERLIRLAEAFGKKLDLPPEDMEKFLLLCRYHDVGEISLPPNLVKKGRMTWEEREILQKHCVAGYRIAISVPSISGIADLILSHHEHYDGSGYPFKLRGKEIPFLSRVFAIIDAYEAVVGQRPYRKPLSHEEAVEELKRCAGTQFDPDLVKLFTEMGPVI
SIO_010081: TOCE_RS02400
subclass of: SO_0000673
so part of: TOCE_RS02400
location: 474132..475574
location: region:474132-475574:1
so has part: feature:474132-475574:1:exon

WP_013275300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474132-475574:1:exon

TOCE_RS02405
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02405
old locus tag: Toce_0474
so part of: sequence
location: complement(475591..476184)
location: region:475591-476184:-1
so has part: feature:475591-476184:-1:exon
subclass of: SO_0000010

position:475591:-1
position: 475591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476184:-1
position: 476184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475591-476184:-1:exon

TOCE_RS02405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02405
old locus tag: Toce_0474
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDTEVLIKAGIAAVVPVYEAGAGNVTLVITSDGKEHLIGNTTRTVIRRIARAYGVDLAAVRENYGRAVNRRNYVPVPLSPSLILIPVKFRERPLGENDGTVGYLSYYEIRDIEENGSFCRVLLACGKWLRVLLGKATLLEYMKDARLIAGIYEEKHRVAAKAEQVREPEPACLQESGKLREELINLLVRLLSKSGG
SIO_010081: TOCE_RS02405
subclass of: SO_0000673
so part of: TOCE_RS02405
location: complement(475591..476184)
location: region:475591-476184:-1
so has part: feature:475591-476184:-1:exon

WP_013275301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475591-476184:-1:exon

TOCE_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02410
old locus tag: Toce_0475
so part of: sequence
location: complement(476261..476770)
location: region:476261-476770:-1
so has part: feature:476261-476770:-1:exon
subclass of: SO_0000010

position:476261:-1
position: 476261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476770:-1
position: 476770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476261-476770:-1:exon

TOCE_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02410
old locus tag: Toce_0475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778837.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0042834 - peptidoglycan binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidoglycan recognition family protein
translation: MERFYPRFIVIHHTAGHDVSALQINRIHAARGFGVKITEPLSLVEEYRERGFPCCNGGVVISIGYHYLIRADGSVEKGRPDFAPGAHCTASGMNMRSIGIALTGNFSSRDNPSGKKGHPEPTAAQLKALKKLVSFLMDVYSIPPSGVLGHSKVPGARTECPGDRFVFSF
SIO_010081: TOCE_RS02410
subclass of: SO_0000673
so part of: TOCE_RS02410
location: complement(476261..476770)
location: region:476261-476770:-1
so has part: feature:476261-476770:-1:exon

WP_013275302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476261-476770:-1:exon

TOCE_RS11830
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS11830
old locus tag: Toce_0476
so part of: sequence
location: complement(476793..476954)
location: region:476793-476954:-1
so has part: feature:476793-476954:-1:exon
subclass of: SO_0000010

position:476793:-1
position: 476793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476954:-1
position: 476954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476793-476954:-1:exon

TOCE_RS11830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS11830
old locus tag: Toce_0476
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778836.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YvrJ family protein
translation: MEDFMAQVANVGFPIAVSVYLLVRIEAKMESLTASIHELAMVIEGLKNPSRSA
SIO_010081: TOCE_RS11830
subclass of: SO_0000673
so part of: TOCE_RS11830
location: complement(476793..476954)
location: region:476793-476954:-1
so has part: feature:476793-476954:-1:exon

WP_013275303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476793-476954:-1:exon

TOCE_RS02415
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02415
old locus tag: Toce_0477
so part of: sequence
location: complement(477010..477231)
location: region:477010-477231:-1
so has part: feature:477010-477231:-1:exon
subclass of: SO_0000010

position:477010:-1
position: 477010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477231:-1
position: 477231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477010-477231:-1:exon

TOCE_RS02415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02415
old locus tag: Toce_0477
inference: COORDINATES: protein motif:HMM:NF022597.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2922 domain-containing protein
translation: MAQILEMSFQNESGRTTRIQIPDPKENLTPQEIQPVMDLVVSRNLFATSGGDIVKALGARILIRDAVEIIPGE
SIO_010081: TOCE_RS02415
subclass of: SO_0000673
so part of: TOCE_RS02415
location: complement(477010..477231)
location: region:477010-477231:-1
so has part: feature:477010-477231:-1:exon

WP_013275304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477010-477231:-1:exon

TOCE_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02420
old locus tag: Toce_0478
so part of: sequence
location: complement(477271..477495)
location: region:477271-477495:-1
so has part: feature:477271-477495:-1:exon
subclass of: SO_0000010

position:477271:-1
position: 477271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477495:-1
position: 477495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477271-477495:-1:exon

TOCE_RS02420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02420
old locus tag: Toce_0478
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778834.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1659 domain-containing protein
translation: MAVIATPVEATLQIVVQTGTGDNGRPITRTRSFRNLKTSAPDADVMEVAKALAGLQNYPVDSFRKVVEIELTEQ
SIO_010081: TOCE_RS02420
subclass of: SO_0000673
so part of: TOCE_RS02420
location: complement(477271..477495)
location: region:477271-477495:-1
so has part: feature:477271-477495:-1:exon

WP_013275305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477271-477495:-1:exon

TOCE_RS02425
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: truD
locus tag: TOCE_RS02425
old locus tag: Toce_0479
so part of: sequence
location: 477831..478994
location: region:477831-478994:1
so has part: feature:477831-478994:1:exon
subclass of: SO_0000010

position:477831:1
position: 477831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478994:1
position: 478994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477831-478994:1:exon

TOCE_RS02425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: truD
locus tag: TOCE_RS02425
old locus tag: Toce_0479
EC number: 5.4.99.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013778845.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA pseudouridine(13) synthase TruD
translation: MKIKVIPEDFIVKELADIKYAPDGPYRIYLLEKRHWNTMDALKFISRENKVPLSKIGSGGRKDRHALTYQYISVPREYELHFEKPNVRLQFVGFADDFVSPAVLEGNYFEITLRRINPGSVDGIKSRLSEVEEFGYPNFFDDQRFGSVEDPGEFIAERIIKKHYNGALKLYFTTVHPEDKREEKARKRKIAELWGRWEDILPLCRTPVEKDIIKILLEGQSKKHLAAALNAIPKEELSMFFSAYQSFLWNRTLEKLLPLFAGELFTVKGKIMDYTFYRTLPPGKLKALKKLEIPTVSSRIPEAAPEVKKALDEVLTERGVKPSDFNLKKIRKSFFKSFMRPAIVFPQDLYLGPFEEDGLYAGYRKVTIKFTLPPGSFATMLIKSLGI
SIO_010081: TOCE_RS02425
subclass of: SO_0000673
so part of: TOCE_RS02425
location: 477831..478994
location: region:477831-478994:1
so has part: feature:477831-478994:1:exon

WP_013275306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477831-478994:1:exon

TOCE_RS02430
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: galU
locus tag: TOCE_RS02430
old locus tag: Toce_0480
so part of: sequence
location: 479066..479977
location: region:479066-479977:1
so has part: feature:479066-479977:1:exon
subclass of: SO_0000010

position:479066:1
position: 479066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479977:1
position: 479977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479066-479977:1:exon

TOCE_RS02430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: galU
locus tag: TOCE_RS02430
old locus tag: Toce_0480
EC number: 2.7.7.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014481080.1
GO function: GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO process: GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UTP--glucose-1-phosphate uridylyltransferase GalU
translation: MKIKKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPTIQYIVEEAVASGIEEILIITGRNKRAIEDHFDKSVELELELKKKGKGELLRVVEEISNMVDIHYVRQKEPRGLGHAIYCARTFVGDEPFAVMLGDDVMCSKEPVLKQMMDIYERYNCSILGVQQVPEDDVSKYGIIDGAFIEDRIYKVNNMIEKPKKQEAPSRMAIMGRYIITPRIFEILEHTKPGAGGEIQLTDALKELLNYEVIYAYTFEGKRYDVGDKLGYLVATVEFALKREELRDEFRKYLLGLLAEDQAGYCEAAAGKNSD
SIO_010081: TOCE_RS02430
subclass of: SO_0000673
so part of: TOCE_RS02430
location: 479066..479977
location: region:479066-479977:1
so has part: feature:479066-479977:1:exon

WP_013275307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479066-479977:1:exon

TOCE_RS12555
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS12555
pseudo: true
so part of: sequence
location: 480173..>480319
location: region:480173-480319:1
so has part: feature:480173-480319:1:exon
subclass of: SO_0000010

position:480173:1
position: 480173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480319:1
position: 480319
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480173-480319:1:exon

TOCE_RS12555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS12555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011024842.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: TOCE_RS12555
subclass of: SO_0000673
so part of: TOCE_RS12555
location: 480173..>480319
location: region:480173-480319:1
so has part: feature:480173-480319:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:480173-480319:1:exon

TOCE_RS02440
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: istB
locus tag: TOCE_RS02440
old locus tag: Toce_0482
so part of: sequence
location: complement(480390..481121)
location: region:480390-481121:-1
so has part: feature:480390-481121:-1:exon
subclass of: SO_0000010

position:480390:-1
position: 480390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481121:-1
position: 481121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480390-481121:-1:exon

TOCE_RS02440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: istB
locus tag: TOCE_RS02440
old locus tag: Toce_0482
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013275115.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MLKDEIAACCKALKLSRNLVENCDKIEAQSHEEYLLKLLRLELEHRDASRKDRLLKNAGFYTIKTFAGYIFDEIKLPQGLTPQDLKDCKFLEEKKNLILYGNVGTGKTHLATAIGVEACKKGYNVKFFRTAALVNRLVEARKGGELSGLLKQLSKPDLLICDEWGYVPLDREGAQLLFQVISDCYERRSVVITTNLEFSRWASIFYDEQMTAAMIDRLIHHSYLLIFDGQSYRMRQSLMRQLS
SIO_010081: TOCE_RS02440
subclass of: SO_0000673
so part of: TOCE_RS02440
location: complement(480390..481121)
location: region:480390-481121:-1
so has part: feature:480390-481121:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:480390-481121:-1:exon

TOCE_RS02445
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: istA
locus tag: TOCE_RS02445
old locus tag: Toce_0483
so part of: sequence
location: complement(481115..482629)
location: region:481115-482629:-1
so has part: feature:481115-482629:-1:exon
subclass of: SO_0000010

position:481115:-1
position: 481115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482629:-1
position: 482629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481115-482629:-1:exon

TOCE_RS02445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: istA
locus tag: TOCE_RS02445
old locus tag: Toce_0483
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011837913.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MTHIDNIRKAFFMKGQNISEIAREFQKDRKTIRKYIYQEDWNTRVKVEEVKHTFPKLDPFKADIDQWLEEDKKARKKQRHTAKRIYDRLCEKYQDKFNCSYRTVAGYVAMRKKELYQDNSCRLPLEHIPGEAQVDFGEADFYENGTLHHGFYLNLSFPYSNVGYTQLFKGENQECLFQGLKDIFEHLGGVPRKLWFDNASTIVKLSKNGERKLTDAFLRFKQHYGFEAVFCNPASGHEKGNVENKVGYHRRNFLVPVPRFEKLEDFNRELLRLCDRDMHREHYRKEASIAELFNEDRKALLELPTVPYEVAGYITVKTNAYAKFSLNGGKHLYSTAPKYANSRVLVKITAHEVIPLDESHREIVRHRRLYGDNKQESMDWLPYLTQLSRCPGALKYSGIYSMLPDPLREYLDGLSKSERGKALKALAVLCTKSSFEQAVNAVAEALLYGVQDLDSLVAIHNRITGITPQLEPVKIPEGVPELTAFRFNAEDYDKAFLKGGANLC
SIO_010081: TOCE_RS02445
subclass of: SO_0000673
so part of: TOCE_RS02445
location: complement(481115..482629)
location: region:481115-482629:-1
so has part: feature:481115-482629:-1:exon

WP_083768520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481115-482629:-1:exon

TOCE_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02450
pseudo: true
so part of: sequence
location: <482804..484117
location: region:482804-484117:1
so has part: feature:482804-484117:1:exon
subclass of: SO_0000010

position:482804:1
position: 482804
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:484117:1
position: 484117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482804-484117:1:exon

TOCE_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02450
inference: COORDINATES: protein motif:HMM:NF033551.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1182 family transposase
SIO_010081: TOCE_RS02450
subclass of: SO_0000673
so part of: TOCE_RS02450
location: <482804..484117
location: region:482804-484117:1
so has part: feature:482804-484117:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:482804-484117:1:exon

TOCE_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02455
old locus tag: Toce_0484
so part of: sequence
location: complement(484169..484579)
location: region:484169-484579:-1
so has part: feature:484169-484579:-1:exon
subclass of: SO_0000010

position:484169:-1
position: 484169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484579:-1
position: 484579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484169-484579:-1:exon

TOCE_RS02455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02455
old locus tag: Toce_0484
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTREELKKVLEEIETLKGLIRKELGDEAFEERSVSSGASTLKNTLRRSIKSGEFKSTLLKISGSLDFTKSAIGSISQIVEKAREKINGESEKASDLSQIAAMGSAWFPMFLSLMQAPEFQNLTASMLANMLKDEAS
SIO_010081: TOCE_RS02455
subclass of: SO_0000673
so part of: TOCE_RS02455
location: complement(484169..484579)
location: region:484169-484579:-1
so has part: feature:484169-484579:-1:exon

WP_013275309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484169-484579:-1:exon

TOCE_RS02460
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02460
old locus tag: Toce_0485
so part of: sequence
location: 484683..485843
location: region:484683-485843:1
so has part: feature:484683-485843:1:exon
subclass of: SO_0000010

position:484683:1
position: 484683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485843:1
position: 485843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484683-485843:1:exon

TOCE_RS02460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02460
old locus tag: Toce_0485
inference: COORDINATES: protein motif:HMM:NF012311.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S8 family peptidase
translation: MVPYILLYYSLLLGVAGAVQKKKSRKRYKIVGFKPGVQVMETSNILESYGIKIKKQLPLIDACLCEVSPSAVSLQKLSEDPMIDFIEDDYVATIQGVPTGLVLGRSKGQEIPWGVKKVAAQSAWSTCRGESVRVGIIDTGIDLYHPDLKDNIKDACGILDCKNILDDNGHGTHVAGTIAALDNDIGVVGVAPKVEIYAVKAFDRYGRGNISNIVEALNWCLEKKVHVVNMSFGVKNRSFALRRAIEKLYKNNIVLVAAAGNTGKEDSVLYPAKYPEVIGVAALNMHDRPASFSSSGPEVDIIAPGVDIPSTYKNGGYKLMSGTSMATPHVTGAAALLLSLTRMSPQEVKSFLMDTARDLGLPKEKQGAGLLDVSSAVSNIKKLGRL
SIO_010081: TOCE_RS02460
subclass of: SO_0000673
so part of: TOCE_RS02460
location: 484683..485843
location: region:484683-485843:1
so has part: feature:484683-485843:1:exon

WP_013275310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484683-485843:1:exon

TOCE_RS02465
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02465
old locus tag: Toce_0486
so part of: sequence
location: 485847..486182
location: region:485847-486182:1
so has part: feature:485847-486182:1:exon
subclass of: SO_0000010

position:485847:1
position: 485847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486182:1
position: 486182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485847-486182:1:exon

TOCE_RS02465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02465
old locus tag: Toce_0486
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKFEEIRKEIEKSGKTPESLGQIFSKFGLTPDNPEFAKELLREAGLDVDLTPEKAAETVKKMTEKIPPELKKQMAELMLEVSKYIPAGPMPEDVKNFLLSWKGEEKDKET
SIO_010081: TOCE_RS02465
subclass of: SO_0000673
so part of: TOCE_RS02465
location: 485847..486182
location: region:485847-486182:1
so has part: feature:485847-486182:1:exon

WP_013275311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485847-486182:1:exon

TOCE_RS02470
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02470
old locus tag: Toce_0487
so part of: sequence
location: 486524..489481
location: region:486524-489481:1
so has part: feature:486524-489481:1:exon
subclass of: SO_0000010

position:486524:1
position: 486524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489481:1
position: 489481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486524-489481:1:exon

TOCE_RS02470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02470
old locus tag: Toce_0487
inference: COORDINATES: protein motif:HMM:NF016800.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: O-antigen ligase family protein
translation: MGRKKSGISATKHDISREKLTNERNTLYYLIFAGLLILLFYPPYFRGLFFDREILPTHIYSGIVFLAWVIYRSTNLKETRFFRSSIDYAALAVVGAYFLSIFAAVNLRYAVGELLKYINYFIVYYLVSDIARSEGDKKIILWTMVISAAGVALAGIGAAAGTINYPGAFVGGRINSTLQYPNTLAAYLTAALILGLGLQVTSERRWEMTILAAVNYTLFLAFIFALSRAAWLMFPVFYLILIISIPGLYKMKVIGYSLQTFAAGIFASPGFDSSISGGETSKVWFWYLVGLIFAIAVFYIFEKLSERFTVRIKPVTLLSVFVILTIITGVGVYIAFTTEKPLTLAHGPKEPESWKTSLHTVSNVKPDTEYVLKVIVTARPGQEQDKWGGAVLIKSVDKNNKETDIKSEFFNKALDHQLVEIPFKTRTDTTKLRIGFANNFPGTSVTFSNAEIFEANDRAAGQRIILAYKYIPEAVAQRLSSISFGEFSFQGRLSFYRDALKIIKEHPVLGIGGGGWKSAYFAYQSYRYFTTEVHSFFLQLMVETGIIGLLTFLAVLVLIIRNMIISNINKVDDQKHSALNTAALSSAVAILGHSAVDFNMSLPAVAIYLWALLGIAATIDGGATIPVAKRGQPASKFYATWVVCGITLLFILGSWTLYTGYSYGQKAVRAIQSGDIAGAKEAFEKASKYDPFAASFKADLSQIYDIIGEQGKNKEFKDKALKLREEAAAMEPYNAKLKSLLAATYLREGRLEEGLSLLEEAAKLNPYNISVWEALAEGYEKAAEVYIVKNEVDRAKELLGKCLDIPSKIIELNRKSPQSDPGVVKLVATKDLMLYLKKAAMLFEIPNSDTVKKLKDLVFAADFSIDLNEDGQPDLWTIWGEGEIKINPGENARVIPAGESAVTLYLSEGINLEPNQPYIVELKADVLEGGYKIDIVADNKEVFSLTADKGEFVAPDDIEGKDTRIRIFVNPKSDIYLGEFLLYKK
SIO_010081: TOCE_RS02470
subclass of: SO_0000673
so part of: TOCE_RS02470
location: 486524..489481
location: region:486524-489481:1
so has part: feature:486524-489481:1:exon

WP_013275312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486524-489481:1:exon

TOCE_RS02475
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02475
old locus tag: Toce_0488
so part of: sequence
location: 489569..490345
location: region:489569-490345:1
so has part: feature:489569-490345:1:exon
subclass of: SO_0000010

position:489569:1
position: 489569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490345:1
position: 490345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489569-490345:1:exon

TOCE_RS02475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02475
old locus tag: Toce_0488
inference: COORDINATES: protein motif:HMM:NF013245.2
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MWERLKEIYAYREMLKNLVSKELRARYKGSILGFFWTFFNPLLMLIVYSFVFSFIMRSAIEKYTMFLFVALLPWNYLSGSIIQGAASLVANASLIKKVYFPRELLPLSVVLSNLVNYLLSLLILIPALLLFKIRLTWALLAFPLVLLVETILVASLTLLVSVGNVYFRDLEHITGVFMTVWFFLTPVVYSTEMAPPNAKKFFALNPAAHIVEAYRDIFYKGIWPDWNALLYVGLSCLILFCISLLAFQRWQQAVAEEI
SIO_010081: TOCE_RS02475
subclass of: SO_0000673
so part of: TOCE_RS02475
location: 489569..490345
location: region:489569-490345:1
so has part: feature:489569-490345:1:exon

WP_013275313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489569-490345:1:exon

TOCE_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02480
old locus tag: Toce_0489
so part of: sequence
location: 490371..491132
location: region:490371-491132:1
so has part: feature:490371-491132:1:exon
subclass of: SO_0000010

position:490371:1
position: 490371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491132:1
position: 491132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490371-491132:1:exon

TOCE_RS02480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02480
old locus tag: Toce_0489
inference: COORDINATES: protein motif:HMM:NF012235.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MAKEVSKEVAIEIKDVWKKFRIYHEKTYSLKERIIFWGRNKGEDFWALKGINLTIPKGSTVGLLGRNGSGKSTLLKIISRILYPTRGEVKINGRVSTLLELGAGFHPEFTGRENIFLNASILGLTRKEIKERLDDIIAFAELGDFIDNPVRNYSSGMYTRLGFAVAVHVDPEILLIDEVLAVGDLAFQEKCLTRIRELQKRGTTIILVSHSPKQIEDLCDNAVWLDKGEVKMQGPVREVTKAYSEFMKAVEGL
SIO_010081: TOCE_RS02480
subclass of: SO_0000673
so part of: TOCE_RS02480
location: 490371..491132
location: region:490371-491132:1
so has part: feature:490371-491132:1:exon

WP_013275314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490371-491132:1:exon

TOCE_RS02485
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02485
old locus tag: Toce_0490
so part of: sequence
location: 491166..492809
location: region:491166-492809:1
so has part: feature:491166-492809:1:exon
subclass of: SO_0000010

position:491166:1
position: 491166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492809:1
position: 492809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491166-492809:1:exon

TOCE_RS02485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02485
old locus tag: Toce_0490
inference: COORDINATES: protein motif:HMM:NF016145.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide pyruvyl transferase family protein
translation: MIFFYTLPETNRKINSEDASQIVILAGGFNGYGRNFGDLLQLRGTLRWYKQHWPDAVLCPLLHLRTTSDAETLRELIDFFETPHWLFYTHHSEEDTSSRGAAFGLEPLKVSDRLIPIILHVYGGGFFNGFWGRWMIDLIEAVLQTFPISRYIISGQQLGAEFVPVLAEHCRRYRPDLVGCRDPESVKILTQSGIDAFFSGDDAFEELLRYAEIPAKDNNALLLNLSFGLHLNLSNYVYSSPIQEQQNQSLDQVILQQLQDLFQLLTTQFDPLSFPILVGSYLDSRQEVQDTWAALKRTLLTRYFPQFIGLDITGLLLQGRLEDVVPLLRSVKLFVANSYHTALFLKILGVPTYLLAFNDYYTQKQSGIQSTIHSFEEFLTEDLETLRKEQEAILSAHQKARQEWMGLLEHELKEMPEKRGAVLRVTTYLQEDRNRLLAKVNEQEYIISRLESENVALREQLESLHRQNSVLSGELDNLYKQNAVLGDEVAKLRQDNTALAAQLGIIVRSRSWRLVQKYWRLMDRPFWRLLLTPIRKVGIWIWGIGKR
SIO_010081: TOCE_RS02485
subclass of: SO_0000673
so part of: TOCE_RS02485
location: 491166..492809
location: region:491166-492809:1
so has part: feature:491166-492809:1:exon

WP_013275315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:491166-492809:1:exon

TOCE_RS02490
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02490
old locus tag: Toce_0491
so part of: sequence
location: 492806..495055
location: region:492806-495055:1
so has part: feature:492806-495055:1:exon
subclass of: SO_0000010

position:492806:1
position: 492806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495055:1
position: 495055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492806-495055:1:exon

TOCE_RS02490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02490
old locus tag: Toce_0491
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF024831.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MKIWLLTTEYPPFFGGGIATYCFHTAHMFASFGHEVSVFVADSNLEKSISIETIENIRVIKFRPGLIETYKYLGYVAALSFQFSEIVEEFIKQEGAPDVLECQDYLGIAYFLLQKKKVLWDKLTDLPIVLTLHTPKFLCDIHDQAPVYRFPDYWIGEMERFCIRAADAVISPSRYLIDELSKYIDLTKLKTYIIPNPYETSNDKSLISWQESDREDLIFLGRLQYLKGILHLFRYFRELWDNGVNIRLKLVGGDTFFYPKSQTMSSYLQKKYRRYFEDGLVTWEGKKDPETLMQMLRKVRIGIVPSLIESFSYTVVELLSQGVMVIASDSGGHREIIEDGKSGFIFSHQNPESFKSKLLKAMELSPEKMEEMAENARKRLYELCSYEAVYNKKIKVLEELTHTKNCSRIFPFIRESQVEPQDKVQQKELFTEAQEEKDLLSIVIPYYNMGDYIKDTLDSLLRISYPQKEIIVVNDGSDEPKSLAILYQIEKNYPVRVIHKRNGGLATARNEGALNARGEFLAFLDADDLVSAEYYDWAIKILKYYSNVSFIGCWTEYFGAARGIWPTWNPEPPYLLVHNTLNSSGLVFRKRDFLLYGLNDPEMEYGMEDYECVIRMVKNGCRGVIIPRPFFKYRVRPDSMSRQFNRGNMLYLYNLISQKHADFYGKYAKDVFNLLNANGPGYLYDNPTWELPPIGFVSKGTENEIVGSLDWSTHEIPPELKEKLLSLWRRPFFRRALRLFFRLRLDKLF
SIO_010081: TOCE_RS02490
subclass of: SO_0000673
so part of: TOCE_RS02490
location: 492806..495055
location: region:492806-495055:1
so has part: feature:492806-495055:1:exon

WP_013275316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492806-495055:1:exon

TOCE_RS02495
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02495
old locus tag: Toce_0492
so part of: sequence
location: 495071..495865
location: region:495071-495865:1
so has part: feature:495071-495865:1:exon
subclass of: SO_0000010

position:495071:1
position: 495071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495865:1
position: 495865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495071-495865:1:exon

TOCE_RS02495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02495
old locus tag: Toce_0492
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF021616.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family A protein
translation: MPLKVAIVIPCYNYGEFVEEAVHSALSQDTKIELVIVDDGSTDPETLRVLDRLRARGIYVYRQSNRGLPGARNTGIRLTSAPYIVCLDADDIISPSYCSTCLEVLEKQPDVGFVYSTTRVFGNQNKQWSNLSYSALHLLVDNYIPYSAMFRRKIWEEVGGFDENMRLGYEDWDFWLSAVEKGWRGFHIPEGLFWYRKHGKSMLSSSNQHRKELKNYLRRKHHNLYSHKAILKLLKDEPFRIPRAFGALIKEEILRPLKNLYNSL
SIO_010081: TOCE_RS02495
subclass of: SO_0000673
so part of: TOCE_RS02495
location: 495071..495865
location: region:495071-495865:1
so has part: feature:495071-495865:1:exon

WP_013275317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495071-495865:1:exon

TOCE_RS02500
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02500
old locus tag: Toce_0493
so part of: sequence
location: 495993..497135
location: region:495993-497135:1
so has part: feature:495993-497135:1:exon
subclass of: SO_0000010

position:495993:1
position: 495993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497135:1
position: 497135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495993-497135:1:exon

TOCE_RS02500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02500
old locus tag: Toce_0493
inference: COORDINATES: protein motif:HMM:NF012744.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 4 protein
translation: MSLNSKSKVLFLATVYTHLAAFHIPFMRLLQEKGYEVHAAASPDDGGKEEVEAIRARCWDIPFSRSPYSLKNWRALRELDHLFEAHRFDLIHVHTPVAAFLGRFMAKAKCQGPVLYTAHGFHFYRGVPLKNWLLYYPMERLASHWTDGLIVINREDFEIARRFGFEPGRNLFYVHGVGVNLSCYTSLPSKGQYIRVDLGLSHSDIIITCVAEMTPNKNHILILKAWKKLAAKCSHCHLLLVGKGELMPALKKKVKEEKIPRVYFLGYRRDVPQILRESDIVTLTSKREGLPKSIMEAMAAGKPVVATNVRGSRDLVEHGKTGFLVDLGDDEGLFFALKSLIENGELRKTMGKAGREKIKDYSMDRVLNEMEAIYMRYLAL
SIO_010081: TOCE_RS02500
subclass of: SO_0000673
so part of: TOCE_RS02500
location: 495993..497135
location: region:495993-497135:1
so has part: feature:495993-497135:1:exon

WP_013275318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495993-497135:1:exon

TOCE_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02505
old locus tag: Toce_0494
so part of: sequence
location: 497220..498620
location: region:497220-498620:1
so has part: feature:497220-498620:1:exon
subclass of: SO_0000010

position:497220:1
position: 497220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498620:1
position: 498620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497220-498620:1:exon

TOCE_RS02505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02505
old locus tag: Toce_0494
EC number: 2.7.8.-
inference: COORDINATES: protein motif:HMM:TIGR03025.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0016740 - transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar transferase
translation: MNGKTKKNLISLLLAILDIFFINLGYLLIFHLWKGKFTTENIEAYITVIPVISITALILFNIYGIYNIERRNISELAVSSVIALFFSNVIGMASSFFLRSFAFPRSVFIGGFILQTVFIVTLRYIAINLYKKIHGPERLLIVGREEDAKQIINSISRIDHGWVDCRYAVLENEAKMLEWAMNLADTIFLTAEAAKNLKKEIVDASLKGKKIAIIPDLYEILMPKARLVTFDDLLVFEFPHWNVSRGQRVIKRVLDFISAFVGLILSLPLIIIISILIKLTSEGPILYIQERIGQYGKKFKLYKFRTMINNAEKHTGPVMAGKDDPRLTPLGKILRALRFDEIPQLINVLKGDMSLIGPRPERPVFVEKYCQINPYYNYRHLVKPGITGLAQVMGSYDTSFEDKLRYDLYYISNYSLLLDLKIFFLTLKTILLAEGIVKKKNIDVDEQWQNMIVLCSDELSSSKENK
SIO_010081: TOCE_RS02505
subclass of: SO_0000673
so part of: TOCE_RS02505
location: 497220..498620
location: region:497220-498620:1
so has part: feature:497220-498620:1:exon

WP_013275319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497220-498620:1:exon

TOCE_RS02510
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02510
old locus tag: Toce_0495
so part of: sequence
location: 498854..499660
location: region:498854-499660:1
so has part: feature:498854-499660:1:exon
subclass of: SO_0000010

position:498854:1
position: 498854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499660:1
position: 499660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498854-499660:1:exon

TOCE_RS02510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02510
old locus tag: Toce_0495
EC number: 3.1.3.48
inference: COORDINATES: protein motif:HMM:NF039343.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CpsB/CapC family capsule biosynthesis tyrosine phosphatase
translation: MIDLHAHILPGIDDGSPDLDTSLKMAEIAASEGIRKMVATPHFITKERELERELILEKVKELNDLFREKGIDLEVYPGQEVFLSPEIPELLDEGKLLTLFDGGKYLLVELPMMSIPPYSLNIIHSVHLRGVKVILAHPERNREIIADIKKLCEFVRIGTLVQVNSLSLMGVFGRESMRTAEKILKEGLAHIIATDCHTARSRAPRMKKALAALSEKAASLLSVENPRLVMEGKQIEVPFAGYKAGHLGIAKKLALFFSGFKVVKEREV
SIO_010081: TOCE_RS02510
subclass of: SO_0000673
so part of: TOCE_RS02510
location: 498854..499660
location: region:498854-499660:1
so has part: feature:498854-499660:1:exon

WP_013275320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:498854-499660:1:exon

TOCE_RS02515
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02515
old locus tag: Toce_0496
so part of: sequence
location: 499662..500729
location: region:499662-500729:1
so has part: feature:499662-500729:1:exon
subclass of: SO_0000010

position:499662:1
position: 499662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500729:1
position: 500729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499662-500729:1:exon

TOCE_RS02515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02515
old locus tag: Toce_0496
inference: COORDINATES: protein motif:HMM:NF012613.2
GO component: GO:0030115 - S-layer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-layer homology domain-containing protein
translation: MGGLKKSRIVTVFAIFLLCLSLNYARPAAIELDEGLIDLAFEKLKTLDPTVKSDAIDLLEIFFNSEQGLEDLKDSLPDILALVVGENYQDLLSKHGLSLGRLKSDIDDLKKWSKEDRLKLLDLIEKGDKEGVKALVEKYEGSDNSASGGGSLPEQPIQNQPVFPEISIKFNDIENHWARTYIEFIASKGIIKGKADGLFAPEDRVTRAEFTAMLVRLLKLEDEGTGKDLPFTDVKPDDWFYSIVKAAYNSGLARGIGNKFDPNSLITRQEMAVLVTRAASIMNKSAFVDSAEVEKILSAYKDRDRISDWAKTEIAVAVKLGLISGVSADILVPGDTATRAQAATVIYNLYRLIYE
SIO_010081: TOCE_RS02515
subclass of: SO_0000673
so part of: TOCE_RS02515
location: 499662..500729
location: region:499662-500729:1
so has part: feature:499662-500729:1:exon

WP_013275321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499662-500729:1:exon

TOCE_RS02520
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02520
old locus tag: Toce_0497
so part of: sequence
location: 500827..502944
location: region:500827-502944:1
so has part: feature:500827-502944:1:exon
subclass of: SO_0000010

position:500827:1
position: 500827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502944:1
position: 502944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500827-502944:1:exon

TOCE_RS02520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02520
old locus tag: Toce_0497
inference: COORDINATES: protein motif:HMM:NF012613.2
GO component: GO:0030115 - S-layer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-layer homology domain-containing protein
translation: MRGLTRKAISIALVLMMLVAAMPAWAETGDLTDDQINSLAFSVFLRSKLEGLSVEEIKKLIDLIEKIDQKDIIVDKLFETALDSRLNGYGITRDSVTDFAKSLRDDKFQNKSWKEWTKEIAEKVKEPGINSLTQDQINWIKHLDNDIFDKKFPGLTALINTKFNNKFDFIRFNRQVFEKVITKNIDISYEGGRFSVSFKDSLKDDLNLYLSGQPAAVSGYFKKGQSIVPLNEQEIEALEDVITDIITAFNDSEFTTSEKDLIAKALESFGFDVKGYPVTPPEPGDDGSSGGTGGGGGGGGAAPSEPEIEIPKDQNKPVAVIVPADAVKVTVADGKAVVTFDEKAVSDLLKLLDEAVKKAEGKKLALIIDLTGSEKIGDKATVELPASLAAKAFEKGATLTVNLKKIGIDLPAGSVEVGNNALKINVEAKDAKSALMNIKGIENMRPVGSAVEANVLLGDNPASFKKKVTLRLSIKGLTTNIDKLGIYYLNEKEGRAEFKGGKVDKASGEIRANLAHLSTYVLLEYDRTFGDIKSHWAKNYVESMAAKHVVDGRTADKFVPNDNVTRAEFAKLVVGALELDLVKYKGSFEDVASGAWYADYIQTAYDNGLITGRVEGKVFDPNAKITRQEIMAIIGRALARKPSKDAGTLLAPFKDAAEIAGYAKEHVALLVEMGIVSGYPDGTVRPQAHTTRAEAVKLIYGLYNN
SIO_010081: TOCE_RS02520
subclass of: SO_0000673
so part of: TOCE_RS02520
location: 500827..502944
location: region:500827-502944:1
so has part: feature:500827-502944:1:exon

WP_013275322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500827-502944:1:exon

TOCE_RS11580
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS11580
old locus tag: Toce_0498
so part of: sequence
location: 503003..503566
location: region:503003-503566:1
so has part: feature:503003-503566:1:exon
subclass of: SO_0000010

position:503003:1
position: 503003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503566:1
position: 503566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503003-503566:1:exon

TOCE_RS11580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS11580
old locus tag: Toce_0498
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKEKGKIPYKAIIITLALFLALIISAYHILVNEAFDLVFPDHPGEVSQSGGQAQPPTDIKSPDLPRTPEVDVHETGSEEGQTSRGTPPPKFEKPEKPLGTTAGKAIEDISIDEISGNISFSDKRRILWLVVRRLTSDDIKYLLGLLKGGLTESEKEEAKKIAFSRFTPEEIQEIRSLYHKYKHLTE
SIO_010081: TOCE_RS11580
subclass of: SO_0000673
so part of: TOCE_RS11580
location: 503003..503566
location: region:503003-503566:1
so has part: feature:503003-503566:1:exon

WP_013275323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503003-503566:1:exon

TOCE_RS02530
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02530
old locus tag: Toce_0499
so part of: sequence
location: 503585..504298
location: region:503585-504298:1
so has part: feature:503585-504298:1:exon
subclass of: SO_0000010

position:503585:1
position: 503585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504298:1
position: 504298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503585-504298:1:exon

TOCE_RS02530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02530
old locus tag: Toce_0499
inference: COORDINATES: protein motif:HMM:NF014732.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Wzz/FepE/Etk N-terminal domain-containing protein
translation: MEEINIYEEEISLREIISVLKKRLRLITVVVAICIMAAATYTFWIKKPVYESYTTIMVGKPVQRVQDSSAPITYQELQTNRLLVSTYGEIAKSRSTLEEVLRRLNLNTTYEKLKSRIKVNLVKNTEIIEIRVSDHDPVMAATIANAVSESFSRQVIRIMNVENVQVIDEAIPIYQKVQPKPVLNLSLSLILGLMMGVFFAFLQESFDTSIKSPEDVAKYLGLPVIGSIPYIEKGEVA
SIO_010081: TOCE_RS02530
subclass of: SO_0000673
so part of: TOCE_RS02530
location: 503585..504298
location: region:503585-504298:1
so has part: feature:503585-504298:1:exon

WP_013275324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503585-504298:1:exon

TOCE_RS02535
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02535
old locus tag: Toce_0500
so part of: sequence
location: 504298..505014
location: region:504298-505014:1
so has part: feature:504298-505014:1:exon
subclass of: SO_0000010

position:505014:1
position: 505014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504298-505014:1:exon

TOCE_RS02535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02535
old locus tag: Toce_0500
EC number: 2.7.10.2
inference: COORDINATES: protein motif:HMM:TIGR01007.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004715 - non-membrane spanning protein tyrosine kinase activity [Evidence IEA]; GO:0004713 - protein tyrosine kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CpsD/CapB family tyrosine-protein kinase
translation: MEEMDAQLFVMDDPKSVVSEAFRVLRTNLQFSSIDRPLKKVVVTSSIPQEGKSTVIANLAVSIASAGSRVLLVDADLRRPKLYKLFLLENYKGLSNLLAEDLPLDTVVNTTKVENLHVITSGPVPPNPAEVLGSAKMKNFLDEVASLYDMVLIDAPPVNSVADAAILSTLVDGVILVVEEGSTEREAAVAAKQQLDKVNARILGVVLNKVKQQKGGGYYYYYYYYGEGDHKRKKKKIT
SIO_010081: TOCE_RS02535
subclass of: SO_0000673
so part of: TOCE_RS02535
location: 504298..505014
location: region:504298-505014:1
so has part: feature:504298-505014:1:exon

WP_013275325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504298-505014:1:exon

TOCE_RS02540
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: wbaP
locus tag: TOCE_RS02540
old locus tag: Toce_0501
so part of: sequence
location: 505065..506615
location: region:505065-506615:1
so has part: feature:505065-506615:1:exon
subclass of: SO_0000010

position:505065:1
position: 505065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506615:1
position: 506615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505065-506615:1:exon

TOCE_RS02540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: wbaP
locus tag: TOCE_RS02540
old locus tag: Toce_0501
inference: COORDINATES: protein motif:HMM:TIGR03022.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0016740 - transferase activity [Evidence IEA]
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyl-phosphate galactose phosphotransferase WbaP
translation: MNNSQVEIRKTGRQIVTQSNEAAIALRPAPTLDLAHAFWGAFEITLLAAMDFLGIATSFMLALLIRIRTLPALSPLYSSMVPDRLINNFWWLTGIVLGILAFEGLYTARYPFWRELQRLVKGITLAFLVVFTVIFMAKLSSEVSRTVLTLTYLFCLLILPFCRYTGKTILSRLGLWRRKVVILGAGKTGELVAKIFSSDSYLGYEVVGFLEDDPGKKHKTFAIKKDTILKVLGNFSDAQEVMQRLGVRHLVVAAPGMPSQELVKLVNRLQREAASVLVIPDLLGVPVSSAEIDYFFEEQMLGFRVRNNLSDPVNMVLKRTFDLVVGSIALLVSAPIMAIIALAIKLDSPGPVIFAHKRIGRWGKEFKCYKFRTMYLNNEEILQRYLASNPAAKEEWEKYAKLKGYDPRVTRVGRFLRKLSLDELPQIFNVLKGEMSLVGPRPYLPRERFRMDNFAETILLARPGITGLWQISGRNEIDFEGRLNLESWYVRNWSLWLDIVILIRTVGVVLARRGAY
SIO_010081: TOCE_RS02540
subclass of: SO_0000673
so part of: TOCE_RS02540
location: 505065..506615
location: region:505065-506615:1
so has part: feature:505065-506615:1:exon

WP_013275326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505065-506615:1:exon

TOCE_RS02545
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02545
old locus tag: Toce_0502
so part of: sequence
location: 506719..508077
location: region:506719-508077:1
so has part: feature:506719-508077:1:exon
subclass of: SO_0000010

position:506719:1
position: 506719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508077:1
position: 508077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506719-508077:1:exon

TOCE_RS02545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02545
old locus tag: Toce_0502
EC number: 1.1.1.-
inference: COORDINATES: protein motif:HMM:TIGR03026.1
GO function: GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-glucose/GDP-mannose dehydrogenase family protein
translation: MHITIIGIGYVGLAAAVAFSYLDHHVVGIEKDPQKLRLLQESKSPIFEPGIEELLDKSRERLSFTNDTVGAVADSDVIMIAVGTPPKKNGEADLCYVEEAARQAAMGMVSGGTYVIVIKSTVPIGTNRRVMHIITKTLAERGVKANVHIASNPEFLRQGMALKDMLYPDRIVVGAETAEAIETLRNLYRPILEQSFAPPSSLPRPDGYSFPPLIITDLTSAEMIKYAANAFLALKISFINEIAGLCEKVGADIKEVARGIGLDPRIGPRFLQAGLGWGGSCFPKDTAALLAVAAEYGYTMPIIEAARAVNTRQRTLIVEKLQSVLKILRGRIIGILGLAFKPGTDDIRESPALDLVRILIERGAHVKVHDPVAMPKARLVLKELPVDYAADPYTLAEGCDAIILATEWETYRQLNLALLAKRMNQPVLIDGRNFFDPEQARQAGFIYMGVGR
SIO_010081: TOCE_RS02545
subclass of: SO_0000673
so part of: TOCE_RS02545
location: 506719..508077
location: region:506719-508077:1
so has part: feature:506719-508077:1:exon

WP_013275327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506719-508077:1:exon

TOCE_RS02550
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02550
old locus tag: Toce_0503
so part of: sequence
location: 508605..509714
location: region:508605-509714:1
so has part: feature:508605-509714:1:exon
subclass of: SO_0000010

position:508605:1
position: 508605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509714:1
position: 509714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508605-509714:1:exon

TOCE_RS02550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02550
old locus tag: Toce_0503
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF024831.2
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 4 protein
translation: MKVLHIVLKPRFSGAEILVKDLAVTHSSQGIAVGIAAFNPPEDDFMPIIENLSISGVKCFLPVSPLKKTSRLLALWNWLAQFRPDIIVAHSAIPALYTRIALFNRQMPKVISVLHAVDDYRDWRLRLPEYILRWKSARVVAVSDESARYYIRRFPKAHIKIIPNGIHINRFILAAQNRAKHREYFGLAGHTQIVLQVGRITPVKQQHLSLAAIIPIMRENPNVELWFIGPIEDKSYYNALLDKVRSFEIAERVRFWGGQSNLELFLAVSDLLLMPSVREASSIAFLEALASGIPVIASDIPAFAFAEKYPGVWLVSPENTPEFGDRIQLALAEKMRHVRDLSSYSFQRTAEQYLSLFKEVLDNEKGCVD
SIO_010081: TOCE_RS02550
subclass of: SO_0000673
so part of: TOCE_RS02550
location: 508605..509714
location: region:508605-509714:1
so has part: feature:508605-509714:1:exon

WP_013275328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508605-509714:1:exon

TOCE_RS02555
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02555
old locus tag: Toce_0504
so part of: sequence
location: 509692..510825
location: region:509692-510825:1
so has part: feature:509692-510825:1:exon
subclass of: SO_0000010

position:509692:1
position: 509692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510825:1
position: 510825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509692-510825:1:exon

TOCE_RS02555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02555
old locus tag: Toce_0504
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF012744.2
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 4 protein
translation: MRRVVLIDPFSTGHHVSYARILAKGLRNRGSEVVAIGDPQLLKGLGNLIIEGVPLELQGKGEAIIREWQKFHYMQVAVNFAQKMKPDIIHFLYLDRFALVLAMSGVLGMQYRATLHWGYMLPEFLSRPLQRVRAAFEVRALRRLAARGFRIIVHSRWLQKSLAERVGHRTFDFVPYPVEPHDSSESRLRARLLRESLGLPKGSRLVLVFGGTRYDKGVDLAVKALMHLDTYWHLLVAGKSESFDEVTLLELARRHGVRERLHLHLQYIPEEIINDFFLAADVVLLPYRSIFSGQSGPLTLAASLGIPVAAASVPVLAETVEQYRLGVLFPPEDICGMAQALRVLEEKQICTLQSEFCRDHSPDAFIEAVMKSYVSSE
SIO_010081: TOCE_RS02555
subclass of: SO_0000673
so part of: TOCE_RS02555
location: 509692..510825
location: region:509692-510825:1
so has part: feature:509692-510825:1:exon

WP_041423833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509692-510825:1:exon

TOCE_RS02560
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02560
old locus tag: Toce_0505
so part of: sequence
location: 510874..512001
location: region:510874-512001:1
so has part: feature:510874-512001:1:exon
subclass of: SO_0000010

position:510874:1
position: 510874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512001:1
position: 512001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510874-512001:1:exon

TOCE_RS02560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02560
old locus tag: Toce_0505
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF012744.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 4 protein
translation: MRVALVTNIASPYRIPVWDALGKEVEDLRIFLCAENEPNRIWKIKDLGSYAFEYRILPGKQWYVPSRDWAIYLNPTLWCELNEYRPTHLIVSGYETPSYLMAIAYAKLHRVRLVIWWGSHALSSRSRRGPVAWVRKHILRLADAYITYGTRATEYLINMGIPIERIVTGTNTVDVERVAGLVESYRVEMGPRIDKRTRFLYVGQLIERKGVRQLLRAFRALPKERAELIIVGYGPLEDELKMFAKDNGMDNIIFAGSTRTLEETARYYAWADVLVMPSLIEVWGLVVNEALAAGLWVLASRYAGATFDLVERAPVEVGIAFNPIDEEDFIRSLNMSLSNAHLRRSKEISKWGMMHSPKRYAHCIVSCLFLSEQFC
SIO_010081: TOCE_RS02560
subclass of: SO_0000673
so part of: TOCE_RS02560
location: 510874..512001
location: region:510874-512001:1
so has part: feature:510874-512001:1:exon

WP_013275330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510874-512001:1:exon

TOCE_RS02565
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02565
old locus tag: Toce_0506
so part of: sequence
location: 512033..513655
location: region:512033-513655:1
so has part: feature:512033-513655:1:exon
subclass of: SO_0000010

position:512033:1
position: 512033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513655:1
position: 513655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512033-513655:1:exon

TOCE_RS02565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02565
old locus tag: Toce_0506
inference: COORDINATES: protein motif:HMM:NF016852.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LicD family protein
translation: MYEFIILALTIGGVLMLRPSIFGEMYSEYGLGIITAILILDLIKHRFVIPGRIKKYLPFLFWFSFLWFYMLITALLFISSNFVFAVKAFILNFITVWAVALILARGERNYLFFRWFGRIMAILGYSSLITFVVSFFYPLNNLYFGQIVTPSYRAAGQIYFPFTIRYGRYTFGDFVLLRDQGVFREPGILQAFANFMLVRALNFKEKFWVILGLLMQLVFTFSTATLFLTPITLGLWHLFISNNRRKYWKFRLILFSRFTSAFMGVLLIIVGAIAFLHFPGFGFSDKLLTHETSISDRVDNMIQGFVAGLEKPFGIGLYGVNRSNAGINLVAATEQIGIIGFILAIGVYIVSVLSAPARARKKFAIMIMPLFITALVSQPLLDAPFDGSPKNWLLRRIHYSRIKFYRVIIQYYYCNDKIIKDRGLKGVLKKKIMDLVKLIFKLFSKKITIQNIHKRLENLLRKYDYYNSDIVCNYLGAWGSKEFIPRKYVGEKKKIEFEGYNFSSIEDPVAYLSKIYGDFMKLPPIEKRKSHHAFSFIELN
SIO_010081: TOCE_RS02565
subclass of: SO_0000673
so part of: TOCE_RS02565
location: 512033..513655
location: region:512033-513655:1
so has part: feature:512033-513655:1:exon

WP_041423834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512033-513655:1:exon

TOCE_RS02570
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02570
old locus tag: Toce_0507
so part of: sequence
location: 513991..515415
location: region:513991-515415:1
so has part: feature:513991-515415:1:exon
subclass of: SO_0000010

position:513991:1
position: 513991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515415:1
position: 515415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513991-515415:1:exon

TOCE_RS02570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02570
old locus tag: Toce_0507
inference: COORDINATES: protein motif:HMM:NF025654.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008755 - O antigen polymerase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: O-antigen polymerase
translation: MNKRVSNNQKYFCYTKIFWLIFVFNLLAIILPLSFIINISEFRINSNGILTLFIIWYSSARLAILSAKGLKRLLSMTFWVFVYIWLGISPLFQVSVGRMPWPITTSEYHVTYALIISITGLLFYDVGMFLAGHLIKTNNTNYTPKLILDERKILLFAPISIVTAAVIIVAFFGGFDIFLLARAVRNAYLNELYSKSQLLLLDNLLRAIIFVSLQSVFVIWIRRTNNYLTKKNILKFIFLIVLIVLNLYINNPISTARYRFGFVVISLLFIGLKWNEKTSFPLWTLMMITFLLIIFPYADLFRNRADVSLKSLEFLPIYEHLVGNGDYDAFQQLSNTVAYVSKKGITWGKQLLGVIFFAIPRNLWPNKPLGSGEFIALNSGYYYTNLSCPLWAEAYLNGGFIAVIIIFTVYGILTKNIEHQYLSQQNGASFLDIFVPFFAPYQIFFLRGDLMSTFAYLIPNILFMLLVTKINCKR
SIO_010081: TOCE_RS02570
subclass of: SO_0000673
so part of: TOCE_RS02570
location: 513991..515415
location: region:513991-515415:1
so has part: feature:513991-515415:1:exon

WP_013275332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513991-515415:1:exon

TOCE_RS02575
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02575
old locus tag: Toce_0508
so part of: sequence
location: 515441..516619
location: region:515441-516619:1
so has part: feature:515441-516619:1:exon
subclass of: SO_0000010

position:515441:1
position: 515441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516619:1
position: 516619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515441-516619:1:exon

TOCE_RS02575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02575
old locus tag: Toce_0508
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF024831.2
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 4 protein
translation: MNILLVHNHYRQPGGEDSVFFSEKMLLSDQGHNVFFYTANNAQLEKFSAAGMIRNTLWNQKSYWDLRYLISKHSVQVAHFHNTFPLISPSAYYAAKSENIPVVQTLHNYRLLCPNALFFRAGHVCEDCLGRFVPWPGVLRRCYRGSIAASGVVATMLTFHRVLGTWKRMVDVYVALTEFARQKFIKAGFPAEKIVVKPNFVYPDPGVGEGKAGFTLFVGRLSPEKGLDTLLVAWERLEGKLPLKIVGDGPLAGKVIEATQRLIGVEWLGRRSREEVLALMKEASFLIFPSISHEGFPMTIVEAFAVGLPVLASNIGNMSNLIDPGRTGFHFRAGDSEDLAAKVEWAWAHTRQLMEMRREARAEYEAKYTAEKNYEMLMNIYQLAISRAKGRG
SIO_010081: TOCE_RS02575
subclass of: SO_0000673
so part of: TOCE_RS02575
location: 515441..516619
location: region:515441-516619:1
so has part: feature:515441-516619:1:exon

WP_013275333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515441-516619:1:exon

TOCE_RS02580
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02580
old locus tag: Toce_0509
so part of: sequence
location: 516718..517992
location: region:516718-517992:1
so has part: feature:516718-517992:1:exon
subclass of: SO_0000010

position:516718:1
position: 516718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517992:1
position: 517992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516718-517992:1:exon

TOCE_RS02580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02580
old locus tag: Toce_0509
inference: COORDINATES: protein motif:HMM:NF007640.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WcaI family glycosyltransferase
translation: MSGTLGLRLLIYGINYTPEPTGTGKYTGEMAAWLAARGHQVDAIVGLPHYPSWEVDPAYQDKGFHTEIIEGVRVLRVPHFVPSPERIGAIERIRLESSFSLKALRYWLLFLLQNNSYDAVIAICPPMQVGVYPWLYRLFRGVPWIFHIQDLQVDVAVRLGLLNGKLSKVLYTVENFLLRRATRVSTITEAMRRRIIAKGVPEKNTWLFPNWSDITFIRPMPRNNAFRQELRVAEDQILFMYAGNMGEKQGLELVLQAAEHLRYYSQLRFVLVGAGVAKQRLEKMAEEMKLTNVTFLPVQPLERLPEMLAAADVHLVVQKSEAADLVMPSKLTNILAAGRPVVATADSGTALHDVLTSYQAGIVTPPGDLKAFIDALQLLAESAILREQMGRNARLYAERYLDKERILKDFEDKLITLVREVRKR
SIO_010081: TOCE_RS02580
subclass of: SO_0000673
so part of: TOCE_RS02580
location: 516718..517992
location: region:516718-517992:1
so has part: feature:516718-517992:1:exon

WP_041423835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516718-517992:1:exon

TOCE_RS02585
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: gmd
locus tag: TOCE_RS02585
old locus tag: Toce_0510
so part of: sequence
location: 517989..519041
location: region:517989-519041:1
so has part: feature:517989-519041:1:exon
subclass of: SO_0000010

position:517989:1
position: 517989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519041:1
position: 519041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517989-519041:1:exon

TOCE_RS02585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: gmd
locus tag: TOCE_RS02585
old locus tag: Toce_0510
EC number: 4.2.1.47
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017944086.1
GO function: GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GDP-mannose 4,6-dehydratase
translation: MKKALITGITGQDGSYLTEFLLNKGYEVHGIIRRASTFNTDRIDHIYRDPHDQEARLFLHYGDLTDGTGLRRILEKVQPDEVYNLAAQSHVKVSFEQPEYTADVVATGTLRLLEALRDYIKVSGREVRFYQAGSSEMFGASPPPQNEKTPFYPRSPYAVSKVAAYWYAVNYREAYGMFICNGILFNHESPRRGETFVTRKITRAATRIKLGLQDKLYLGNLDAKRDWGYAGDYVEAMWLMLQQNEPDDYVIATGESHSVREFLEEAFGLLGLDWRQYVEIDPRYFRPTEVEFLLGDSTKARQKLGWKPKVTFKDLVKMMVEHDLLLAHQEKTLKDAGYAVALRGVASANA
SIO_010081: TOCE_RS02585
subclass of: SO_0000673
so part of: TOCE_RS02585
location: 517989..519041
location: region:517989-519041:1
so has part: feature:517989-519041:1:exon

WP_013275335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517989-519041:1:exon

TOCE_RS02590
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02590
old locus tag: Toce_0511
so part of: sequence
location: 519034..519963
location: region:519034-519963:1
so has part: feature:519034-519963:1:exon
subclass of: SO_0000010

position:519034:1
position: 519034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519963:1
position: 519963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519034-519963:1:exon

TOCE_RS02590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02590
old locus tag: Toce_0511
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016292066.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GDP-L-fucose synthase
translation: MHKGAKVYVAGHKGLVGSAILRKLQAEGYSNIVTRTHQELDLTNQQEVYRFFETERPEYVFLAAAKVGGILANSTYPAVFIRENLLIQTNIIDAAYRYGVKKLLFLGSSCIYPKFAPQPIKEEHLLTGALEPTNEPYAIAKIVGIKMCQAYNKQYGTNFISVMPTNLYGPGDNFDLETSHVLPALIRKFHEAKVAGAPHVVVWGSGTPRREFLHVDDLADACLFLMNNYDSSEIINIGVGKDLTIAELANLIKEIVGYKGEIVFDTSKPDGTPRKLLDVSKLFNLGWRPRIRLEDGIRSTYEWYMQNYT
SIO_010081: TOCE_RS02590
subclass of: SO_0000673
so part of: TOCE_RS02590
location: 519034..519963
location: region:519034-519963:1
so has part: feature:519034-519963:1:exon

WP_013275336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519034-519963:1:exon

TOCE_RS02595
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: dgt
locus tag: TOCE_RS02595
old locus tag: Toce_0512
so part of: sequence
location: 520073..521410
location: region:520073-521410:1
so has part: feature:520073-521410:1:exon
subclass of: SO_0000010

position:520073:1
position: 520073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521410:1
position: 521410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520073-521410:1:exon

TOCE_RS02595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: dgt
locus tag: TOCE_RS02595
old locus tag: Toce_0512
inference: COORDINATES: protein motif:HMM:TIGR01353.1
GO function: GO:0008832 - dGTPase activity [Evidence IEA]
GO process: GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dNTP triphosphohydrolase
translation: MSNYGDGVVLRGDELIEFLDNQLANYAVKHKYGKEARLYPEKYDPNDNRNPFQHDRDRIIHSRAFRRLKGKTQVFTVSRNDHIRTRLSHTLEVAQLSRSVARALRLNEDLAEAIALGHDLGHPPFGHAAEEELNDILRGRTKLWTCDIGGFKHNINSLKIVDYFERAYAEFPGLNLTHWTREGILKHTGLNDKKDGLQVHDPTIDMSKLRLEVGVPSFLEGQIVAVCDELAQVTHDLEDAGRAGIVRDFSEEASPWCEIEIFSKALERARQERFYDETNLRSRLIRHLINLLMEDLISATEERIKKCILECGEVDPVKQPFSTKIVDFSADVAKQVENLQKLLRETVYASYEVSRGDIKARLYIQSIFKAYYDHPSRMPDYVYRKYNDAKGASESEELKRSNLEKFKDKIKNDPIFVRTIVEHIAGMTDQYLLNEYRQLFTPEIW
SIO_010081: TOCE_RS02595
subclass of: SO_0000673
so part of: TOCE_RS02595
location: 520073..521410
location: region:520073-521410:1
so has part: feature:520073-521410:1:exon

WP_013275337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520073-521410:1:exon

TOCE_RS02600
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02600
old locus tag: Toce_0514
so part of: sequence
location: complement(521630..522586)
location: region:521630-522586:-1
so has part: feature:521630-522586:-1:exon
subclass of: SO_0000010

position:521630:-1
position: 521630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522586:-1
position: 522586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521630-522586:-1:exon

TOCE_RS02600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02600
old locus tag: Toce_0514
inference: COORDINATES: protein motif:HMM:NF012472.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldo/keto reductase
translation: MKKNVLGMTGIEVTELCFGALPMGPLQKNLDLDSCVEVTAYALKKGINFIDTAQMYKTYEPIREAIKLTGINPVISTKSTASTYSDMEKAIDEALRALDRNYIDIFFMHAARVGEDVFDVRKEALKCLLDYKSKGYIKAVGISTHNVKVVELASQRDDIDVVFPIINYKGVGILGGSVEDMKKAIEVSSSRGKGVLLMKVLGGGVLLNEYKKSMDFARNLKGYHSIAVGMVSKEEVDFNVNYFNGIYDEEKSPVLGKNQKNFIVVDSLCKGCKTCLSACPNYAMEFAEERNKAYINREKCLTCGYCTASCPEFAIRVI
SIO_010081: TOCE_RS02600
subclass of: SO_0000673
so part of: TOCE_RS02600
location: complement(521630..522586)
location: region:521630-522586:-1
so has part: feature:521630-522586:-1:exon

WP_013275339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521630-522586:-1:exon

TOCE_RS02605
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02605
old locus tag: Toce_0515
so part of: sequence
location: 523101..524207
location: region:523101-524207:1
so has part: feature:523101-524207:1:exon
subclass of: SO_0000010

position:523101:1
position: 523101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524207:1
position: 524207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523101-524207:1:exon

TOCE_RS02605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02605
old locus tag: Toce_0515
EC number: 1.1.1.6
inference: COORDINATES: protein motif:HMM:NF006941.0
GO function: GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0008888 - glycerol dehydrogenase [NAD+] activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol dehydrogenase
translation: MTRAIIGPGKYVQGNGVLKDIKEHTMKLGRSFFIIASENGIKRTKPVIEESFAGEKVELVFEPFNGECSENEIERLKGLAEKNNSQVIVGIGGGKVLDTAKAIAYFLKLPVVVVPTVASTDAPCSALSVIYTDEGVFSKYLILPRNPDVVMVDTGFIVKAPARLLAAGMGDALATYFEARACFRSNATTLAGGKSTKAAMALAELCYRTLLEDGLKAKLAVENNACTLAVENIVEANTYLSGIGFESGGLAAAHAIHNGFTVLEECHHMYHGEKVAFGTIVQLVLENSPMEELEEVVGFCLDVGLPVTLEDLGIKEVKEADIRKVAEASCAEGETIHNMPFKVTPEDVYNAILGADALGRTLKNQYIR
SIO_010081: TOCE_RS02605
subclass of: SO_0000673
so part of: TOCE_RS02605
location: 523101..524207
location: region:523101-524207:1
so has part: feature:523101-524207:1:exon

WP_041424025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:523101-524207:1:exon

TOCE_RS02610
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02610
old locus tag: Toce_0517
so part of: sequence
location: complement(524585..525976)
location: region:524585-525976:-1
so has part: feature:524585-525976:-1:exon
subclass of: SO_0000010

position:524585:-1
position: 524585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525976:-1
position: 525976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524585-525976:-1:exon

TOCE_RS02610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02610
old locus tag: Toce_0517
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013777360.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MATE family efflux transporter
translation: MARLADLFSPKDMTVGTPWKRIVEFSIPMLIGNIAQQLYNTVDSIVIGRYVGDNALAAVGSAFPVLNFLLVLFVAVASGASIMVAQYFGAKDRERLSRSIGVCITLTAIVSTLIMVISPFAIRPMLVFINTPESILDWCEDYLLILLVGNWGFSYFNILSGILRGLGDSFSALVFLLISTALNVVLDIWFVAGLNMGVPGVALATVIAQTVSAVLCIIKLKKMDDLFDFNLNMMKPIKEYVLQLLRLGLPSGLTQVIFSLAMITVQSLTNTFGEMIIACNVIVMRVDGFAMMPNFTFGITMTTFAGQNVGAKKMKRVELGTRQGLAIAVGVSTVITIIILIFGRYLMNIFTDTAELVDLSMRMMRILAVGYIAMAVTQVLSGVMRGAGDTVTPMWLSLITTIFLRVPIAYGIAYLTRSAEYPNGRPESIFVSLLIAWVFGAIITVIFFKKGNWKEKALLKDVR
SIO_010081: TOCE_RS02610
subclass of: SO_0000673
so part of: TOCE_RS02610
location: complement(524585..525976)
location: region:524585-525976:-1
so has part: feature:524585-525976:-1:exon

WP_013275341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524585-525976:-1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 555079
inference: COORDINATES: alignment:crt:1.2
inference: COORDINATES: alignment:pilercr:v1.02
rpt family: CRISPR
rpt type: direct
rpt unit range: 526446..526475
rpt unit seq: gtttttagcttacctatgagggattgaaac
so part of: sequence
location: 526446..529224
location: region:526446-529224:1
so has part: feature:526446-529224:1:region

position:526446:1
position: 526446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529224:1
position: 529224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526446-529224:1:region

TOCE_RS02615
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02615
old locus tag: Toce_0518
so part of: sequence
location: complement(529323..530378)
location: region:529323-530378:-1
so has part: feature:529323-530378:-1:exon
subclass of: SO_0000010

position:529323:-1
position: 529323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530378:-1
position: 530378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529323-530378:-1:exon

TOCE_RS02615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02615
old locus tag: Toce_0518
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013274922.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MIVSTGSFWKPIYNLLELENINILLVNAKHIKNVPGRKTDVKDAEWIASLLRHGLLKGSFVPDREQRELRELVRYRHSLVEERSRELNRIQKVLEGANIKLSSVVSDINGMSSRAILEALISGVDDPEILAELSHGKLKNKKEDLKRALKGFINYHQRKMLEIQLRHIDYLDEEIERLDEEIKNRMLPFEEDLALLDTIPGVGRRTAEQIIAEIGTNMDQFPSAAHLCSWAGLCSGQNESAGKRKSARTRKGNKKLRSALVEAARAASRAKDTYLSSQYHRIAARRGSNRAAVAVANSILTIVYHILKRRQPYIELGPNFYEEKRRNMVIRQSLKKLESLGLKVTVEAVAS
SIO_010081: TOCE_RS02615
subclass of: SO_0000673
so part of: TOCE_RS02615
location: complement(529323..530378)
location: region:529323-530378:-1
so has part: feature:529323-530378:-1:exon

WP_245523139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529323-530378:-1:exon

TOCE_RS02620
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02620
old locus tag: Toce_0519
so part of: sequence
location: 530520..531602
location: region:530520-531602:1
so has part: feature:530520-531602:1:exon
subclass of: SO_0000010

position:530520:1
position: 530520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531602:1
position: 531602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530520-531602:1:exon

TOCE_RS02620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02620
old locus tag: Toce_0519
inference: COORDINATES: protein motif:HMM:NF015535.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P1 family peptidase
translation: MREWGLSIGLLPPGPLNAITDVEGVTVGHVTLISGEGSLISGKGPVRTGVTAIVPHCGNIFKEKLIASCFVGNGFGKSAGLVQVKELGTLETPIILTNTLSVGTAVDALIEYMLSSNDDIGITTGTVNPVVLECNDGHLNDIRGRHVKKEHVFSAISGAKKTFETGSVGAGTGMICHGFKGGIGTSSRRIEIDATAYTVGALLLTNYGRMEDLIFNGKNVGRILKEEIRGRERVGEKDEGSCIVVIATDAPLDAHGLERVAKRGILGLARTGSFMGNGSGDIAVAFSTANRIYHYGRPVIEVNTISPHSEDINKIFQAAVEAVEEAVWDSMFTAERIVGRDYHEAPLLPVERFLELVRER
SIO_010081: TOCE_RS02620
subclass of: SO_0000673
so part of: TOCE_RS02620
location: 530520..531602
location: region:530520-531602:1
so has part: feature:530520-531602:1:exon

WP_013275343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:530520-531602:1:exon

TOCE_RS02625
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02625
old locus tag: Toce_0520
so part of: sequence
location: complement(531659..531988)
location: region:531659-531988:-1
so has part: feature:531659-531988:-1:exon
subclass of: SO_0000010

position:531659:-1
position: 531659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531988:-1
position: 531988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531659-531988:-1:exon

TOCE_RS02625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02625
old locus tag: Toce_0520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013275344.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MQAPDRGDLVYVNFNPQSGHEQAGRRPGIVLSPKPFNQLTGFAVFCPITRQKKGYPFEVELPVGLAVQGVILADQVKSLDWRARQLQIVGRASNEIVSECLDLIHTFLS
SIO_010081: TOCE_RS02625
subclass of: SO_0000673
so part of: TOCE_RS02625
location: complement(531659..531988)
location: region:531659-531988:-1
so has part: feature:531659-531988:-1:exon

WP_013275344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531659-531988:-1:exon

TOCE_RS02630
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02630
old locus tag: Toce_0521
so part of: sequence
location: complement(531988..532257)
location: region:531988-532257:-1
so has part: feature:531988-532257:-1:exon
subclass of: SO_0000010

position:532257:-1
position: 532257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531988-532257:-1:exon

TOCE_RS02630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02630
old locus tag: Toce_0521
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013275345.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MELNEPKGVPLMTAKVQKWGNSLAIRIPSVVAERLGIHQGSEMEMIIENQAIKLIPKKKKPTLEELLAKITPENRHAEIDFGTEGNELF
SIO_010081: TOCE_RS02630
subclass of: SO_0000673
so part of: TOCE_RS02630
location: complement(531988..532257)
location: region:531988-532257:-1
so has part: feature:531988-532257:-1:exon

WP_013275345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531988-532257:-1:exon

TOCE_RS02635
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02635
old locus tag: Toce_0522
so part of: sequence
location: 532470..532862
location: region:532470-532862:1
so has part: feature:532470-532862:1:exon
subclass of: SO_0000010

position:532470:1
position: 532470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532862:1
position: 532862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532470-532862:1:exon

TOCE_RS02635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02635
old locus tag: Toce_0522
inference: COORDINATES: protein motif:HMM:NF017020.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HEPN domain-containing protein
translation: MPNRAFDRLKQALKDLNHAQVSRKNGDHDWACFAAHQAGEKAVKALHLYLGQEAWGHVIARLLKDLPEGICVKEELIEKAKVLDNFYIPARYPDSHPDGAPFEHYGSLQSGEAIKYASEIVEFVRSQMAG
SIO_010081: TOCE_RS02635
subclass of: SO_0000673
so part of: TOCE_RS02635
location: 532470..532862
location: region:532470-532862:1
so has part: feature:532470-532862:1:exon

WP_013275346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532470-532862:1:exon

TOCE_RS02640
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02640
old locus tag: Toce_0523
so part of: sequence
location: 532816..533178
location: region:532816-533178:1
so has part: feature:532816-533178:1:exon
subclass of: SO_0000010

position:532816:1
position: 532816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533178:1
position: 533178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532816-533178:1:exon

TOCE_RS02640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02640
old locus tag: Toce_0523
EC number: 2.7.7.-
inference: COORDINATES: protein motif:HMM:NF014021.2
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase domain-containing protein
translation: MPVRSLNSSVLKWPDKETVVYSLLEWVKEITQNRNDIVKIGYFGSYARGDWGVGSDLDIIIIVKKSDIPFNNRSAEWDTKGIPIPVDLLVYTVEEYENMKAMNSGFSKSIEKEVVWIYPL
SIO_010081: TOCE_RS02640
subclass of: SO_0000673
so part of: TOCE_RS02640
location: 532816..533178
location: region:532816-533178:1
so has part: feature:532816-533178:1:exon

WP_013275347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532816-533178:1:exon

TOCE_RS02645
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cas10
locus tag: TOCE_RS02645
old locus tag: Toce_0524
so part of: sequence
location: 533390..535756
location: region:533390-535756:1
so has part: feature:533390-535756:1:exon
subclass of: SO_0000010

position:533390:1
position: 533390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535756:1
position: 535756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533390-535756:1:exon

TOCE_RS02645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cas10
locus tag: TOCE_RS02645
old locus tag: Toce_0524
inference: COORDINATES: protein motif:HMM:TIGR02578.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III-A CRISPR-associated protein Cas10/Csm1
translation: MAFLFNDFTAEERNLLLAALLHDIGKFWQRTQDEPMRRIVSENYRAFYEARNHSSPGHQDWSAYFCETFVKIREVTNAVINHHGPSERLHYFVSAGDCLSAGERLDIAEEKGGEIRQLVSILSCIELDGLRSKKAYYKKLVPLGEYCVPEEEPSPNPKQGYKELWDAFIKAFNSIQNFDDPVELTKLYSILEEYTFNIPSAYYYSMPDISLWAHLKTAAAIAFALYRELEGKPNQHVISKLDSIIRRPSAVEEDLFCLVKGDISGIQDFVYDTKMDGATKALRGKSFYLSYLMTVIPKYILKKERLPITNLLYSGGGHFYLIMHGRFLQKLDEYQKELDGLFLDAHHGELALLLKGVTLKPADFRVKDGKLPEKFEELGKLLQEEKNRKFYSILKEDQKMVFGPFKEKGEPCPHCGNPVKEDECPFCRSFERLGENLIKKKFLVEEWKEKSERQKGSIEKVEDIFKRLGVSVEFTDEALEKDYSFAVKREEWDFKKCCGYMKIPVGMKLDQKGNIITFDEISDSAKGIKVWGVLRGDVDNLGRIFREGLGQNRSFARIMTLSQEMAQFFGPSLERMLNRLGSCDKSHSYENCAVIYAGGDDFFLVGPWDAMPYVAEEIKKEFYRYTGHNPAITVSMAFDIAPDKKFPLYRVAQTAGENLENAKHFKDPVRKKEKNCFAFAGVPIGWEDFDKFKDVKEKLFKALDELKVSRSLLGIIYRVCREYEVSANEDGKMFRSWRLFYYVARLKERNKKAEDILDKLIYLLIEKGNKLYKYAFQSARWAEFETRK
SIO_010081: TOCE_RS02645
subclass of: SO_0000673
so part of: TOCE_RS02645
location: 533390..535756
location: region:533390-535756:1
so has part: feature:533390-535756:1:exon

WP_013275348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:533390-535756:1:exon

TOCE_RS02650
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: csm2
locus tag: TOCE_RS02650
old locus tag: Toce_0525
so part of: sequence
location: 535770..536192
location: region:535770-536192:1
so has part: feature:535770-536192:1:exon
subclass of: SO_0000010

position:535770:1
position: 535770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536192:1
position: 536192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535770-536192:1:exon

TOCE_RS02650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: csm2
locus tag: TOCE_RS02650
old locus tag: Toce_0525
inference: COORDINATES: protein motif:HMM:NF015695.2
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III-A CRISPR-associated protein Csm2
translation: MAWESNRKGKSDSFNDVKEIEERLPSALDKNKDPNGDDFFYCAEKTGKLLATKRVSVSQIRKIFNKARRIKYEENGIFELRMLKAVIAYTAGRFPENMKEFKGIFTKAIEIAEKSEENLKRFKQFFEAVVAYHRSYGGRE
SIO_010081: TOCE_RS02650
subclass of: SO_0000673
so part of: TOCE_RS02650
location: 535770..536192
location: region:535770-536192:1
so has part: feature:535770-536192:1:exon

WP_013275349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535770-536192:1:exon

TOCE_RS02655
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: csm3
locus tag: TOCE_RS02655
old locus tag: Toce_0526
so part of: sequence
location: 536208..537026
location: region:536208-537026:1
so has part: feature:536208-537026:1:exon
subclass of: SO_0000010

position:536208:1
position: 536208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537026:1
position: 537026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536208-537026:1:exon

TOCE_RS02655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: csm3
locus tag: TOCE_RS02655
old locus tag: Toce_0526
inference: COORDINATES: protein motif:HMM:TIGR02582.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III-A CRISPR-associated RAMP protein Csm3
translation: MKDLKLAGKYIITSEIVALTGLHIGTSSNTLEIGGVDNSVVKDALGRPYIPGSSLKGKMRALLEYAEGLITMVYVVHNERNESSNTRIHMCKKEDCAVCNIFGRNHGKHKVVDGNDPRGYRPVDFTDAVTPTRLIVRDATLIKESITEQMKENMDFEWTEVKFENNLDRVTSAANPRQTERVPAGARFKSEMVLTVFQGEGTKYIEKLLEAMLLLEDDYLGGQGTRGYGRIAFEKVSIAFRSVGYYEGREEEQVIVENCPSLREALGKIKRG
SIO_010081: TOCE_RS02655
subclass of: SO_0000673
so part of: TOCE_RS02655
location: 536208..537026
location: region:536208-537026:1
so has part: feature:536208-537026:1:exon

WP_013275350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536208-537026:1:exon

TOCE_RS02660
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: csm4
locus tag: TOCE_RS02660
old locus tag: Toce_0527
so part of: sequence
location: 537033..537992
location: region:537033-537992:1
so has part: feature:537033-537992:1:exon
subclass of: SO_0000010

position:537033:1
position: 537033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537992:1
position: 537992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537033-537992:1:exon

TOCE_RS02660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: csm4
locus tag: TOCE_RS02660
old locus tag: Toce_0527
inference: COORDINATES: protein motif:HMM:TIGR01903.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III-A CRISPR-associated RAMP protein Csm4
translation: MDSGVKRYRVKLKFKGPVHFGYKEKTYNLTETFAHSDTLFSGIVNCYSLLYGKAAADNLVEMFFDNPPFKISSAFLYANDEFFVPRPLNMDLTPITGDYKKAKKVKYVPLDFILARDGGGKANKDYRVEHGILARKDMDTPYVISERPRVKIDRGDFSTEIYYVSGCYFREGAGLWFFLDIYDDSEEEKVKAAIRLLGDEGIGGERTYGFGSFEAGIEEYNEKKGNGSGDWLLLSLYYPRMDEKVADIIKAFSLLERAGYSYSPFNQQARKKKVRMLAEGSVFKKDVQGMVVDVSPGEDVGHKILKYGLAYTVPIFNRK
SIO_010081: TOCE_RS02660
subclass of: SO_0000673
so part of: TOCE_RS02660
location: 537033..537992
location: region:537033-537992:1
so has part: feature:537033-537992:1:exon

WP_013275351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537033-537992:1:exon

TOCE_RS02665
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: csm5
locus tag: TOCE_RS02665
old locus tag: Toce_0528
so part of: sequence
location: 538005..539126
location: region:538005-539126:1
so has part: feature:538005-539126:1:exon
subclass of: SO_0000010

position:538005:1
position: 538005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539126:1
position: 539126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538005-539126:1:exon

TOCE_RS02665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: csm5
locus tag: TOCE_RS02665
old locus tag: Toce_0528
inference: COORDINATES: protein motif:HMM:TIGR01899.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III-A CRISPR-associated RAMP protein Csm5
translation: MEKPFQYEVEIISPVNIGDGNRYREFEYIIEGDSIGFIDVIKLLKSNKDNTSFIDYFYRSIDSFRFSWQDALKYAPKIDISEFISYQVKPCGASRVKGDIVSFIKTTGYPYIPGSSLKGSFRTGLMRGVWPSIEEEYKAKLDDTLREKDKKLKEIDDYPEEETFGKPHYSPFKFVRFSDSSLLPLDALGIYEMKILNICHGKAKWFKKNENVEESENATAIYIEALKPGIRAEGFFEIKQRTKNEEIYRIIKNVWILKNAFNAIRNDTKRYIEGEKYFYKEYGLDQVANFYQRLEELNGKLGENEILLQIGFGTGYLSKTIGCFLSAEDLKKLSKQGVRISDANLFPKTRRIIFANGNPDTVPGWVKITFREV
SIO_010081: TOCE_RS02665
subclass of: SO_0000673
so part of: TOCE_RS02665
location: 538005..539126
location: region:538005-539126:1
so has part: feature:538005-539126:1:exon

WP_013275352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538005-539126:1:exon

TOCE_RS11585
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: cas6
locus tag: TOCE_RS11585
old locus tag: Toce_0529
so part of: sequence
location: 539132..539812
location: region:539132-539812:1
so has part: feature:539132-539812:1:exon
subclass of: SO_0000010

position:539132:1
position: 539132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539812:1
position: 539812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539132-539812:1:exon

TOCE_RS11585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: cas6
locus tag: TOCE_RS11585
old locus tag: Toce_0529
inference: COORDINATES: protein motif:HMM:TIGR01877.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endoribonuclease Cas6
translation: MFRLRLEIYFKKDAFFFDRGYKINLSSYFREVIKNQFFVFSDIIPSKKKPAKDGFWALDRAALILNTAFQELLPDIALKIMNTPVDFRYGRLTFSKAIFQRVPLERTGYLLSPVAVALPAGENLLWEERPERFSEALRQMLVDKYIRLYGRRPSDDRFLFRFRGRPVKEELDSGVIAYRGKFEIFSSEELVMLSYLCGLGSFNAMGYGMASPDLYLWKKPETMEGI
SIO_010081: TOCE_RS11585
subclass of: SO_0000673
so part of: TOCE_RS11585
location: 539132..539812
location: region:539132-539812:1
so has part: feature:539132-539812:1:exon

WP_013275353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539132-539812:1:exon

TOCE_RS02675
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: csx1
locus tag: TOCE_RS02675
old locus tag: Toce_0530
so part of: sequence
location: 539813..541177
location: region:539813-541177:1
so has part: feature:539813-541177:1:exon
subclass of: SO_0000010

position:539813:1
position: 539813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541177:1
position: 541177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539813-541177:1:exon

TOCE_RS02675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: csx1
locus tag: TOCE_RS02675
old locus tag: Toce_0530
inference: COORDINATES: protein motif:HMM:TIGR01897.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated CARF protein Csx1
translation: MNSLIYQIGRLDRNIIKKQKFTIEGKTRSKQLSSFALKEHLKENGEQAKVILVYPVSLPFNRTLENANFGDFSRSLKAVLRNPKEEYLSNPKNFFSNMPYSSEVDDFIVIHSIGEYAGINFQGKFNDIVFEIALDMIERYNEEIERIYVDISSGLNIYVSALLEAVRFFSIWATLKNWLPEAKRPEIWITFSDPILDNEAAEYQLHREKLEFKAFFASPINKEDINNVAKKIYEDDRSKKRKLSSLLENFLVIFSAIKNNIPLAVYLFGYEDGEVIDETSRTLIEDMKKKLYDSYAASPNLDKNTYSKGLLSLAFYSGIAEVFWHYQIKNHDEDDGIDLDELKRIFDDLYSLFSLKPNNVFLGNEISNTKRIMGKINIEDSTWHLLIKFHNKEYEGRTPDKRNFFAHSGLEGLVTEMKKEKDKFFVRYTREYTDKSGNKKSVKNLIREWLKEEA
SIO_010081: TOCE_RS02675
subclass of: SO_0000673
so part of: TOCE_RS02675
location: 539813..541177
location: region:539813-541177:1
so has part: feature:539813-541177:1:exon

WP_013275354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539813-541177:1:exon

TOCE_RS02680
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: crn3
locus tag: TOCE_RS02680
old locus tag: Toce_0531
so part of: sequence
location: 541217..541501
location: region:541217-541501:1
so has part: feature:541217-541501:1:exon
subclass of: SO_0000010

position:541217:1
position: 541217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541501:1
position: 541501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541217-541501:1:exon

TOCE_RS02680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: crn3
locus tag: TOCE_RS02680
old locus tag: Toce_0531
inference: COORDINATES: protein motif:HMM:TIGR02579.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated ring nuclease Crn3/Csx3
translation: MVKFDTAEYGKYTILHFELEGPINPEILKDICPPKVNSTKGLIISGRGPIWLYCYLVHYYHFTVFIATFDPRLGGAVIVESHIPEFKPGNVIML
SIO_010081: TOCE_RS02680
subclass of: SO_0000673
so part of: TOCE_RS02680
location: 541217..541501
location: region:541217-541501:1
so has part: feature:541217-541501:1:exon

WP_013275355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541217-541501:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 555079
inference: COORDINATES: alignment:crt:1.2
inference: COORDINATES: alignment:pilercr:v1.02
rpt family: CRISPR
rpt type: direct
rpt unit range: 541723..541752
rpt unit seq: gtttttagcctacctataagggattgaaac
so part of: sequence
location: 541723..543432
location: region:541723-543432:1
so has part: feature:541723-543432:1:region

position:541723:1
position: 541723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543432:1
position: 543432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541723-543432:1:region

TOCE_RS02690
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02690
old locus tag: Toce_0533
so part of: sequence
location: 543530..544794
location: region:543530-544794:1
so has part: feature:543530-544794:1:exon
subclass of: SO_0000010

position:543530:1
position: 543530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544794:1
position: 544794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543530-544794:1:exon

TOCE_RS02690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02690
old locus tag: Toce_0533
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611174.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MKKKRYDREFKEQVVRECQEVGNIALVARRHGLSKNTVYNWLQATRKNGSVIPLPRDVNQRLLEAENRLESLARENDQLKRLVAEKELELAILRELRDRVNPPVADKVAIAKRWVAKGYSLYLVLGFVGLAPSTFYAYESKKEPTVTADNQAKAKAGRPKTQFSYTLDGKKVADEQIKEWLCELVCQDGFPYGYKKLTAALVEDYGLVINHKKVYRLCKELDILKPQRICKSKHPRRLAQRIEVTGPNQLWEMDVKYGYIHGEERFFFQLSLIDVFDRCVIDYHLGLTCTAKDARRVLCNALKKRGIKPGMQMPRLRTDNGPQFIANLFAAACRKLGIVHERIPVKTPNLNAHIEAFHSILEDECYSRHQFASYAEAYEQIAWYMDYYNNRRRHGSLNNMAPQKYYQAIISNSIKPKSLVA
SIO_010081: TOCE_RS02690
subclass of: SO_0000673
so part of: TOCE_RS02690
location: join(543530..543836,543836..544794)
location: region:543530-544794:1
so has part: feature:543530-543836:1:exon
so has part: feature:543836-544794:1:exon

WP_148218371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:543530-543836:1:exon

position:543836:1
position: 543836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:543836-544794:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 555079
inference: COORDINATES: alignment:crt:1.2
inference: COORDINATES: alignment:pilercr:v1.02
rpt family: CRISPR
rpt type: direct
rpt unit range: 544868..544897
rpt unit seq: gtttttagcctacctataagggattgaaac
so part of: sequence
location: 544868..545300
location: region:544868-545300:1
so has part: feature:544868-545300:1:region

position:544868:1
position: 544868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545300:1
position: 545300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544868-545300:1:region

TOCE_RS02695
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02695
old locus tag: Toce_0534
so part of: sequence
location: complement(545398..546066)
location: region:545398-546066:-1
so has part: feature:545398-546066:-1:exon
subclass of: SO_0000010

position:545398:-1
position: 545398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546066:-1
position: 546066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545398-546066:-1:exon

TOCE_RS02695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02695
old locus tag: Toce_0534
inference: COORDINATES: protein motif:HMM:NF033542.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MAELSHGKLKNKKEDLKRALKGLINDHQRKMLEIKLKHIDYLDEEIERLDEEIKNRMLPFEEDLALLDTIPGVGRRTAEQIIAEIGTNMEQFPSAAHLCSWAGLCPGQNESAGKRKSARTRKGNKKLRSAPVEAARAASRAKDTYLSSQYHRIAARRGSNRAAVAVANSILTIVYHILKRKQPYIELGPNFYEEKRRNMVIRQSLKKLESLGLKVTVETMVS
SIO_010081: TOCE_RS02695
subclass of: SO_0000673
so part of: TOCE_RS02695
location: complement(545398..546066)
location: region:545398-546066:-1
so has part: feature:545398-546066:-1:exon

WP_245523163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:545398-546066:-1:exon

TOCE_RS02700
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: nuoE
locus tag: TOCE_RS02700
old locus tag: Toce_0535
so part of: sequence
location: 546344..546856
location: region:546344-546856:1
so has part: feature:546344-546856:1:exon
subclass of: SO_0000010

position:546344:1
position: 546344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546856:1
position: 546856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546344-546856:1:exon

TOCE_RS02700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: nuoE
locus tag: TOCE_RS02700
old locus tag: Toce_0535
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013779525.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoE
translation: MATATGHGRSFQRVDEIIEAHGRNPVNIISILQEVQNEYRYLPQDVLNYIATAMNISPSKVYGVATFYENFSLEPKGKYVIRICDGTACHVKNSTALLNALTKKLGLKEGQRTTEDLLFTLETVSCLGACGLAPVMVVNEEVHGKVTPEKAEEIIDEIINKERGQNDKER
SIO_010081: TOCE_RS02700
subclass of: SO_0000673
so part of: TOCE_RS02700
location: 546344..546856
location: region:546344-546856:1
so has part: feature:546344-546856:1:exon

WP_013275358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546344-546856:1:exon

TOCE_RS02705
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02705
old locus tag: Toce_0536
so part of: sequence
location: 546840..548717
location: region:546840-548717:1
so has part: feature:546840-548717:1:exon
subclass of: SO_0000010

position:546840:1
position: 546840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548717:1
position: 548717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546840-548717:1:exon

TOCE_RS02705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02705
old locus tag: Toce_0536
EC number: 7.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013779524.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoF
translation: MIKSVEELNKLKDECSKALAGEKMKILVCAGTGCISGGSLKVYEAIKKLLEEKNLYVDIDLYTEDKEGVNVSPSGCHGFCQMGPIVRVEPQGYFYVKVKEEDAQEIVEKTVEKGEPVERLLYKSHEDGQAFMTEDSIPFYGKQSRIVLEHCGKINPENIKEYIAAGGYQALAKALQMTPEEICQVMLKAKLRGRGGAGFPAGIKWDSVRKQKSDVKYVICNGDEGDPGAFMDRSIMEGDPHRVIEGMIIAGYASGATQGYIYVRAEYPLAVRRLKKAIEQAREFGLLGKNILGSGFDFDIKINMGAGAFVCGEGSALIASIEGQRGMPKTRPPRTVEKGLFGKPTVLNNVETYANVPMIILNGADWYLSIGTETSPGTKAFALTGNIVNTGLIEVPMGTTLREVIYEIGGGIPNGKELKAVQIGGPSGGCLTKEHLDLPLDFDTLGTVGAMIGSGGMVVMDEDTCMVEVARFFMSFTQRESCGKCVPCREGTKRMLKLLEKITSGKGTEKDLELLEELAVTVKDGSLCGLGQTAPNPVLTTLKYFRDEYLAHVREKRCPAGVCQALKRYAIDATVCKGCSKCSRVCPVGAISGEIKKPFTINPDKCIKCGACVEACPFKAVKEGK
SIO_010081: TOCE_RS02705
subclass of: SO_0000673
so part of: TOCE_RS02705
location: 546840..548717
location: region:546840-548717:1
so has part: feature:546840-548717:1:exon

WP_013275359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546840-548717:1:exon

TOCE_RS02710
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02710
old locus tag: Toce_0537
so part of: sequence
location: 548718..550418
location: region:548718-550418:1
so has part: feature:548718-550418:1:exon
subclass of: SO_0000010

position:548718:1
position: 548718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550418:1
position: 550418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548718-550418:1:exon

TOCE_RS02710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
locus tag: TOCE_RS02710
old locus tag: Toce_0537
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013779523.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-dependent [FeFe] hydrogenase, group A6
translation: MKTLKINGREVAFSDEKNLLEVIRKAGIELPTFCYHSELSTYGACRMCLVEDKRGNLIAACSTPPREGMEIKTHTKRLLKQRRMTLELILAEHDRDCTTCGKNGDCKLRKLSHDLGVEEIRFGTKENYLPIDDSSEAIVRNPNKCILCGDCVRMCEEVQGIGVIGFAHRGAKAVVTPAFNKNLCEVECVDCGQCSAVCPTGAIVVKSHIDKVWDALNDDNKVVIAQIAPAVRVAFGEAFGLRPGESTEYLIVSALKAMGFDMVFDTCFAADLTVIEEGHEFLERLEKGENLPLFTSCCPAWVKFVEFNYPSFLNNLSSCRSPHQMFGSFTKNYYAKELGVSRENVYVVSIMPCTAKKAEAAREELGVDGNPDVDAVLTTRELIRMVREAGIVFKDLKEEPFDMPFGFSTGGGIIFGATGGVAEAVVRTLDGGHRRFEQVRGSEGLKEATIVKDGKEIRVAVVHGLKNARELLEKIKSGSVKYDMVEVMACPGGCVGGAGQPSPASTGVREERAKGLYNIDNRMQLARSDENPMIKMLYEKWLGSPGSEVAHKYLHTHYRPRRRTEV
SIO_010081: TOCE_RS02710
subclass of: SO_0000673
so part of: TOCE_RS02710
location: 548718..550418
location: region:548718-550418:1
so has part: feature:548718-550418:1:exon

WP_013275360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548718-550418:1:exon

TOCE_RS02715
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
gene: nifU
locus tag: TOCE_RS02715
old locus tag: Toce_0538
so part of: sequence
location: complement(550491..550862)
location: region:550491-550862:-1
so has part: feature:550491-550862:-1:exon
subclass of: SO_0000010

position:550491:-1
position: 550491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550862:-1
position: 550862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550491-550862:-1:exon

TOCE_RS02715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 555079
gene: nifU
locus tag: TOCE_RS02715
old locus tag: Toce_0538
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016290701.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S cluster assembly scaffold protein NifU
translation: MYNEKVLDHFSNPRNAGEIPDADGIGHAGNPVDGDSITIYIKVKDGIIDDIKFKTFGCGAAIAASSMLTVLAKGKTLDEALKITNDQVAEALGGLPPQKLNCSNIAADALHDAIADYKNKISR
SIO_010081: TOCE_RS02715
subclass of: SO_0000673
so part of: TOCE_RS02715
location: complement(550491..550862)
location: region:550491-550862:-1
so has part: feature:550491-550862:-1:exon

WP_013275361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:550491-550862:-1:exon

TOCE_RS02720
type: Gene
subclass of: SO_0000704
RO_0002162: 555079
locus tag: TOCE_RS02720
old locus tag: Toce_0539
so part of: sequence
location: complement(550909..553539)
location: region:550909-553539:-1
so has part: feature:550909-553539:-1:exon
subclass of: SO_0000010