Kosakonia arachidis strain KACC 18508 plasmid unnamed1, complete sequence.
type: Entry
definition: Kosakonia arachidis strain KACC 18508 plasmid unnamed1, complete sequence.
sequence version: NZ_CP045299.1
sequence date: 2023-04-24
sequence: sequence
division: CON
label: NZ_CP045299.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN13053191
keyword: RefSeq
source: Kosakonia arachidis
organism: Kosakonia arachidis
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Kosakonia.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP045299.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 27-SEP-2019\nAssembly Method :: HGAP v. 4\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 175.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/24/2023 03:48:18\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,002\nCDSs (total) :: 4,889\nGenes (coding) :: 4,747\nCDSs (with protein) :: 4,747\nGenes (RNA) :: 113\nrRNAs :: 8, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 7, 7 (5S, 16S, 23S)\ntRNAs :: 83\nncRNAs :: 8\nPseudo Genes (total) :: 142\nCDSs (without protein) :: 142\nPseudo Genes (ambiguous residues) :: 0 of 142\nPseudo Genes (frameshifted) :: 72 of 142\nPseudo Genes (incomplete) :: 117 of 142\nPseudo Genes (internal stop) :: 30 of 142\nPseudo Genes (multiple problems) :: 65 of 142\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 79613
topology: circular
so has quality: SO_0000988
location: 1..79613
location: region:1-79613:1
RO_0002162: 551989

NZ_CP045299
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN13053191
type: BioSample
SIO_000068: biosample

1
title: Complete genome of Enterobacter arachidis KACC 18508
author: Kim, M.
author: Jo, Y.
author: Park, Y.-J.
author: Shin, J.-H.
journal: Unpublished

2
title: Direct Submission
author: Kim, M.
author: Jo, Y.
author: Park, Y.-J.
author: Shin, J.-H.
journal: Submitted (17-OCT-2019) College of Agriculture and Life Sciences, Kyungpook National University, Daehak-ro, Daegu 41566, Korea, Republic of

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79613:1
position: 79613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-79613:1:source
so part of: sequence
organism: Kosakonia arachidis
mol type: genomic DNA
strain: KACC 18508
isolation source: soil
plasmid: unnamed1
country: South Korea
collection date: 2019-05-17

551989
type: Taxonomy
SIO_000068: taxonomy

GCU50_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00005
so part of: sequence
location: complement(39..4820)
location: region:39-4820:-1
so has part: feature:39-4820:-1:exon
subclass of: SO_0000010

position:39:-1
position: 39
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4820:-1
position: 4820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39-4820:-1:exon

GCU50_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00005
inference: COORDINATES: protein motif:HMM:NF020698.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: invasin domain 3-containing protein
translation: MSPSHNIACGEQPKITLVIKPDNITAHENESKIIMVTTQGRHSFNQVNWDADRLLRAGGSLVAENKHCYTLTLPPYNGGAGDNVNHYTLTAVAEDSHGNLSQAETLTVEVLAIRGKMERSAEVRFIESGDAVTGEPSIWSELIASPQMITAGESTELRLTLKDSQGHPVTGRAVTFHTTMGIVDNLSERGEGTYTARYTGEKAGTATITAKIDNMAFEPSVAVMVSPGEPSTAYSEFTIGNSQLLVGESAELRLVLLDFVGNPVPGQKVEFISTLPDAVVEEAVEAIGGIYISRISSNIPGNAEVSVNVNGKPFGLKPVTVTFAAGTVDMDRSELKAEPDILSAGETSRLTLTLRDRFGNAVPGQTVNFAASSGSLSAVSDGGDGSYTAELTDNKPGTVTVTATVQGVSGFEKTVAVTVQAGAPDAAQSVLTAEPGTLSAGETSRLTLTLRDRFGNAVPGQTVNFAASSGSLSAVSDGGDGSYTAELTDNKPGTVTVTATVQGVSGFEKTVAVTVQAGAPDAAQSVLTAEPGTLSAGETSRLTLTLRDRFGNAVPGQTVNFAASSGSLSAVSDGGDGSYTAELTDNKPGTVTVTATVQGVSGFEKTVAVTVQAGAPDAAQSGLTAEPGTLSAGETSRLTLTLRDRFGNAVPGQTVNFAASSGSLSAVSDGGDGSYTAELTDNKPGTVTVTATVQGVSGFEKTVAVTVQAGAPDAAQSGLTAEPDILSAGETSRLTLTLRDRFGNAVPGQTVSFAASSGSLSAVSDGGDGSYTAELTDNKPGTVTVTATVQGVSGFEKTVAVTVQAGAPDAAQSVLTAEPGTLSAGETSRLTLTLRDRFGNAVPGQTVNFAASSGSLSAVSDGGDGSYTAELTDNKPGTVTVTATVQGVSGFEKTVAVTVQAGVPDAAQSGLTAEPDSITAGGRTEVILTLRDSMGNGLDGKKVIFTPSAGILSSVTPAGDGVYTAELTGTTAGTTTVTARVEEYPDFVKQVEVTVRPGHIFSEKTELTAIPDLVTVGEKSTLTMTLRDYYSNGLPGEKVEFTTSHGTLSGVTDKGDGTYVATLTTTSAYIAKVTASVSVESGAWIRKTTTVTFKAGAPDTDRSELTAKPDIITVSSRSVLTLSLDDRYHNSVPGQTVEFSTDAGTLGSVNETGHGVYTVVLTGTTIGLATVTARVKEYPDFEKQVEVTVQAGGPDAAQSVLTAEPGTISAGENSRLTLTLRDSMGNGLDGKTVIFTPSAGILSAVTPAGGGVYTAELTGTTAGTTTVTARVEEYPDFKKQVTVVVETGSPSKNSTVKVSKQTYIIGEEDVYATIHLTDKGGNPLSDKLNWLQSPNVFHLPGTDNQVWKEEATKGNYVVRGIIKTTGLYVAELNTEDGVSVSAPYILDYSKVADMSIDVDKDKYIVGNDLYVRLYLRDAWLNPVSEGEGLSFINSTRTRIRIPGVSEQADVKWSLDEPGVFISKWKATSPGERYKATLESYDENYDYDNGWIKHESRNYKITVPDAARSALGASPQVMELGATITLTLHLRDSDGDYVTGQTVKFIASANVINAEESKGIYTATMTPTSSGKDLVTAKVDGFPEFVKTVTITVW
SIO_010081: GCU50_RS00005
subclass of: SO_0000673
so part of: GCU50_RS00005
location: complement(39..4820)
location: region:39-4820:-1
so has part: feature:39-4820:-1:exon

WP_152406431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39-4820:-1:exon

GCU50_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00010
so part of: sequence
location: 6106..6381
location: region:6106-6381:1
so has part: feature:6106-6381:1:exon
subclass of: SO_0000010

position:6106:1
position: 6106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6381:1
position: 6381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6106-6381:1:exon

GCU50_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020438514.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antibiotic biosynthesis monooxygenase
translation: MIKIKGHLICKNSEETDLIRQLLPEHTRLTKKEAGCISFDVTETTDPLIWKIEEFFKDKTAFDNHQKRTLASAWGKETSSIIRDYIIFEIT
SIO_010081: GCU50_RS00010
subclass of: SO_0000673
so part of: GCU50_RS00010
location: 6106..6381
location: region:6106-6381:1
so has part: feature:6106-6381:1:exon

WP_090127234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6106-6381:1:exon

GCU50_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00020
so part of: sequence
location: complement(6852..7589)
location: region:6852-7589:-1
so has part: feature:6852-7589:-1:exon
subclass of: SO_0000010

position:6852:-1
position: 6852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7589:-1
position: 7589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6852-7589:-1:exon

GCU50_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004948687.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbonic anhydrase
translation: MKGKLMLGIMLATCFSVGATEHSQHWGYEGQESPEHWGKLSPDFALCETGKNQSPVNIQGALKTHHSKPVLVFEQGKQQIINNGHTIQINVSEGNTLRLDDDTFALQQFHFHAPSENEIDGKQFPLEGHFVYKDKDGSLAVLALMFNEGKANPQLTKAWQQMPAKVNQAAILTQPVDINALLPENVGVYRFSGSLTTPPCSEGVIWMVLEQPVSASAEQIRQFRSVLQHANNRPVQPLNGRVIIN
SIO_010081: GCU50_RS00020
subclass of: SO_0000673
so part of: GCU50_RS00020
location: complement(6852..7589)
location: region:6852-7589:-1
so has part: feature:6852-7589:-1:exon

WP_090127235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6852-7589:-1:exon

GCU50_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00025
so part of: sequence
location: complement(8051..14023)
location: region:8051-14023:-1
so has part: feature:8051-14023:-1:exon
subclass of: SO_0000010

position:8051:-1
position: 8051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14023:-1
position: 14023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8051-14023:-1:exon

GCU50_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00025
inference: COORDINATES: protein motif:HMM:NF023351.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: invasin domain 3-containing protein
translation: MSPHNHFTIASVEYPRTFFSSGLLKKTARLCLVLQIFSLLSAAVPPVAMAASGVEKTGVMVSFPESLITPPLGDNRSGLPSLTADDADTATRSRGGTQDSGTAETRLAEHARTAGNLLGSADTGGAAAGLARSAVASAANEKLEGWFGQYGTVKAALNLDQNNTLNNSSLDWLLPVYEAENSLWFMQAGVRNGDKRNTLNLGAGARWLPGTASWLYGVNLFLDKDFTGNNLRTGVGTEARTDYLHFSGNLYHRLSGWRDSRDMTGFDERPANGFDVRMKGWLPTYPQIGTELRYEKYQGGNVTLSGGGRGYNAPYALTAGVNWTPFPLLSVGLEQRAGKAGLNDTNANLQLTWRPSDSLSSQLSADSLTGLRQLNNGRYDLVDRSHSIIREHRRQPTITLALNPENITAHEKENKTIMVTTKGRHSLSKVNWTADSLIGAGGSLVAEDKYRYTLTLPSYNNDAGDEANRYTLTAVAEDSRGNLSLAETLTVTVLQQETAAETILQVSERSAPADGESVIVVTTLVEGSRTGKTARVVTFTTTYPDGMVQEREVNADADGRASLKLASRLAGFVKVLARSGKTERSAEVQFIPIEGALAGLQDSPDAEQSDLTASTGSIAPGEHAEIKLTLKDSQGNTLPGQAVSLKADSGSLSAVTDAGDGTYTTTLTHDGSVTGTVPATVTATVKGIAGFSKQVTVLLRTGAPDADWSEWQVSAKTIAAGGESVLYLLLTDRNGNRVPGQTVSMETSLGHLGPVVDENENGSYRAVLTGDRAGTATVTARVKEYPDFVKQVQVAVLPGTPDAEQSDLTPSTGSIGPGEHAEIVLTLKDSQGNALPGQAVSFNSDWGALSPVSEVSGAGVYKAVLSNYAPNVFPQTATVTATVKGIAGFSKQVTVLLRTGAPDADWSEWQVSAKTIAAGGESVLYLLLTDRNGNRVPGQTVSMETSLGHLGPVVDENENGSYRAVLTGDRAGTATVTARVKESPDFVKQVQVTVLPPATAKEAGSPDAEQSVLTASTGSIEPGEHAEIVLTLKDSQGNALPGQAVSLKADSGSLGAVTDAGDGTYTTTLTHDGFVTGTVPATVMATVKGVAGFSKQVTVLLRTGAPDADWSEWQVSAKTIAAGGESVLYLLLTDRNGNRVPGQTVSMETSLGHLGPVVDENETGGYRAVLTGDRAGTATVTARVKESPDFVKQVQVTVLPGTPDAAQSELTASTGSIVAGESTELRLTLKDSQGHPVTGRAVTFHATMGIVDNLSERGEGTYTARYTGEEAGTVIITAKVDDMETEPSVTVTVSPGEPSTAYSELTSEYPEVVVGESAELRLVLLDFVGNPVPGQKVEFISTLPDAVVEEAVEAIGGIYISRISSNIPGNAEVSVNVNGKPFGLKPVTVTFAAGTVDMDRSELKAEPDILSAGETSRLTLTLRDRFGNAVPGQTVNFAASSGSLSAVSDGGDGSYTAELTDNKLGTVTVTATVLGVEGVSKEVLVMVLPASASTVAVSKNTYRVGDKVDATVTLVDKAGNPLSGQLNWLQLEGVFSLPGTSAGDLEWHDVGGGVYEVKGEAKVLGMQYNATLKTSDGENVSSPYDVVAGDVSSVELGVDKESYLVNEGLEVTASLRDKFGNPISDEDGLAFLNSNKTKLSIGGAWPEITGKWSKKSVGMFVYKQIAYHPGLNYVTTLSSEEGNKGEWSSKRYAIKLHEKSVINMDYSVYGLEREMSITMRLYGTTGGSSVTGYDTAVSGYDNNLLNSWIKVPGATIKYGWREITPGFYMSTWTTKSAVESGRVVLSSSGYTMEGPLYSVEHNPHVNGAFSAFQPNELGITTGFPTTAFKGAQFIIRLDREVAAHYDWQSNNYQVRVTDSDKNKVTVTVTSKPVSGKVVIKGVPKKSRNFPNIEYHTDIKTWYDNYGGQSTNYEGAENYCKHISTKVSLAETLSYVYFEWGYAVYPDDRWYWISEDSSSQYNKWRFNGGRGVIELDQPTSKNYVMCMEKIG
SIO_010081: GCU50_RS00025
subclass of: SO_0000673
so part of: GCU50_RS00025
location: complement(8051..14023)
location: region:8051-14023:-1
so has part: feature:8051-14023:-1:exon

WP_152406432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8051-14023:-1:exon

GCU50_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00030
so part of: sequence
location: complement(15053..16045)
location: region:15053-16045:-1
so has part: feature:15053-16045:-1:exon
subclass of: SO_0000010

position:15053:-1
position: 15053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16045:-1
position: 16045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15053-16045:-1:exon

GCU50_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00030
inference: COORDINATES: similar to AA sequence:RefSeq:NP_490513.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RepB family plasmid replication initiator protein
translation: MFEEVDKSTGELITLTPNANNTVQPVALMRLGVFVPTLKSLKNSNKNTLSKTDATDELTRLSIAKAEGFDKVEITGPRLDMDNDFKTWIGIIHSFAKYKVIGDKVQLSFVEFAKLCGIPSSQSSRKLRERISPSLKRIAGTVISFSRTTEKHTKEYITHLVQSAFYDTERDIVVLQADPRLFELYEFDKKVLLQLKAINALKRRESAQALYTFIESLPKDPAPISLARLRARLSLKSPIFSQNQTVRRAMEQLKEIGYLDYTEMQRGRSVLFNVHYRRPKLKAPKDESEENPRQSVSSTSILDPELSEKLQLLKKLGITMDDLEKLFRSK
SIO_010081: GCU50_RS00030
subclass of: SO_0000673
so part of: GCU50_RS00030
location: complement(15053..16045)
location: region:15053-16045:-1
so has part: feature:15053-16045:-1:exon

WP_244316523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15053-16045:-1:exon

GCU50_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00035
pseudo: true
so part of: sequence
location: complement(16484..>16603)
location: region:16484-16603:-1
so has part: feature:16484-16603:-1:exon
subclass of: SO_0000010

position:16484:-1
position: 16484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16603:-1
position: 16603
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16484-16603:-1:exon

GCU50_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611476.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase core domain-containing protein
SIO_010081: GCU50_RS00035
subclass of: SO_0000673
so part of: GCU50_RS00035
location: complement(16484..>16603)
location: region:16484-16603:-1
so has part: feature:16484-16603:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16484-16603:-1:exon

GCU50_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00040
pseudo: true
so part of: sequence
location: 16682..>17391
location: region:16682-17391:1
so has part: feature:16682-17391:1:exon
subclass of: SO_0000010

position:16682:1
position: 16682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17391:1
position: 17391
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16682-17391:1:exon

GCU50_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611500.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: GCU50_RS00040
subclass of: SO_0000673
so part of: GCU50_RS00040
location: 16682..>17391
location: region:16682-17391:1
so has part: feature:16682-17391:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16682-17391:1:exon

GCU50_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00045
so part of: sequence
location: 17760..18017
location: region:17760-18017:1
so has part: feature:17760-18017:1:exon
subclass of: SO_0000010

position:17760:1
position: 17760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18017:1
position: 18017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17760-18017:1:exon

GCU50_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012848783.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKVLLVSALALSVTSFVCNASEASNVHEEAAKEHEMVAQHHKKIAKLHKEGQHEEAKKEASTAIKESSSAHEKTVGAEAASAKQ
SIO_010081: GCU50_RS00045
subclass of: SO_0000673
so part of: GCU50_RS00045
location: 17760..18017
location: region:17760-18017:1
so has part: feature:17760-18017:1:exon

WP_090127048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17760-18017:1:exon

GCU50_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00050
so part of: sequence
location: 18252..18581
location: region:18252-18581:1
so has part: feature:18252-18581:1:exon
subclass of: SO_0000010

position:18252:1
position: 18252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18581:1
position: 18581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18252-18581:1:exon

GCU50_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00050
inference: COORDINATES: protein motif:HMM:NF012314.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin family protein
translation: MSVFSPSSADEYQKKIQSPNFNLIVVYFYASWSGTCSTISPKFEDASTKYDDVFFIKIDVEANDFDVLADRTYNVNVVPTFTFIKNNMVLTSFNGANYEKLISTIDKYK
SIO_010081: GCU50_RS00050
subclass of: SO_0000673
so part of: GCU50_RS00050
location: 18252..18581
location: region:18252-18581:1
so has part: feature:18252-18581:1:exon

WP_090127046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18252-18581:1:exon

GCU50_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00055
so part of: sequence
location: 18597..19442
location: region:18597-19442:1
so has part: feature:18597-19442:1:exon
subclass of: SO_0000010

position:18597:1
position: 18597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19442:1
position: 19442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18597-19442:1:exon

GCU50_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018905965.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transporter substrate-binding domain-containing protein
translation: MTISLFVKSVFVLRAGFLIMLLTFTVPLYAKNETSMERIKRTKVLRAGVISGAIPYFDKNNITNKWTGFGSDLSRKFAQHLGVEVKFIETTWGNAVMDLQSNKIDIMFGMAETPARRNMIDFSSPVFQNTYTMLCKKGYPVKDWHEFNSSDVKVSVDLGSSMDNFITPMLPMAKIMRFDSTTKATMALQAGRVDCQVLVILQAQSLLNKYPDIGSIQVPNPILTAPVSIGLQREINPDFKDSINSWIESERANGDIKNVILKNAKELSGIEPDDFPASIKF
SIO_010081: GCU50_RS00055
subclass of: SO_0000673
so part of: GCU50_RS00055
location: 18597..19442
location: region:18597-19442:1
so has part: feature:18597-19442:1:exon

WP_217647362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18597-19442:1:exon

GCU50_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00060
so part of: sequence
location: 19454..20119
location: region:19454-20119:1
so has part: feature:19454-20119:1:exon
subclass of: SO_0000010

position:19454:1
position: 19454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20119:1
position: 20119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19454-20119:1:exon

GCU50_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004407701.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0006865 - amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter permease
translation: MTFYQWDFSFLPEYKNLFITGIMYTCIFTVIPVILGFIIGIVVALLRCSSEVNFYVQLLIRSYVEIFRCTPVMVQLIWVYYAFPVLTGLQISAISAALFTLSLYGGAFYAEILRGGILSLGRGQSDAAKSLGMSSFQVICYVITPQVLKNSTPSLINQLILQLKNTSLLSVLALPDLLYQGQVIAHDTYRPLEAYSFIAAIYFIILFPFTIILQKYERKNK
SIO_010081: GCU50_RS00060
subclass of: SO_0000673
so part of: GCU50_RS00060
location: 19454..20119
location: region:19454-20119:1
so has part: feature:19454-20119:1:exon

WP_090127045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19454-20119:1:exon

GCU50_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00070
so part of: sequence
location: complement(20796..21578)
location: region:20796-21578:-1
so has part: feature:20796-21578:-1:exon
subclass of: SO_0000010

position:20796:-1
position: 20796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21578:-1
position: 21578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20796-21578:-1:exon

GCU50_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017460061.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraX family protein
translation: MTQFLSSTKISLISRMHRWLAISPGAADRLKLTALAAMLADHVNTLLLTHPRPELYALGRLAFPLFVLIWARNVMLRPERLQLRANRMWLRAVVTQPAFSLAFRGHDPWYALNILFVFAGVTQLLAWHHRYRLAGMTGGILLLALMTWPLSVASYGVPGLVLALALAIFLHNTSFRHRLTAGAAAFIALLALNSQHFLTIPVTVAVLAILPTVLLPAAAVSMATSPAAGTENRFMPASFFYVAYIIHLMVFGLVRLYLQS
SIO_010081: GCU50_RS00070
subclass of: SO_0000673
so part of: GCU50_RS00070
location: complement(20796..21578)
location: region:20796-21578:-1
so has part: feature:20796-21578:-1:exon

WP_090127043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20796-21578:-1:exon

GCU50_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00075
pseudo: true
so part of: sequence
location: <21604..21981
location: region:21604-21981:1
so has part: feature:21604-21981:1:exon
subclass of: SO_0000010

position:21604:1
position: 21604
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:21981:1
position: 21981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21604-21981:1:exon

GCU50_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: GCU50_RS00075
subclass of: SO_0000673
so part of: GCU50_RS00075
location: <21604..21981
location: region:21604-21981:1
so has part: feature:21604-21981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21604-21981:1:exon

GCU50_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00080
so part of: sequence
location: complement(22056..22343)
location: region:22056-22343:-1
so has part: feature:22056-22343:-1:exon
subclass of: SO_0000010

position:22056:-1
position: 22056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22343:-1
position: 22343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22056-22343:-1:exon

GCU50_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020317119.1
GO function: GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO process: GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MSYAVKFREDALKEWQKLDKTIQQQFAKKLKKCSENPHIPSAKLRGIKDCYKIKLRASGFRLVYQVIDNELIIAVVAVGKRERSDVYNLASERMR
SIO_010081: GCU50_RS00080
subclass of: SO_0000673
so part of: GCU50_RS00080
location: complement(22056..22343)
location: region:22056-22343:-1
so has part: feature:22056-22343:-1:exon

WP_090127026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22056-22343:-1:exon

GCU50_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00085
so part of: sequence
location: complement(22340..22591)
location: region:22340-22591:-1
so has part: feature:22340-22591:-1:exon
subclass of: SO_0000010

position:22340:-1
position: 22340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22591:-1
position: 22591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22340-22591:-1:exon

GCU50_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001595120.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin
translation: MPSIILSETSASVSELKKNPMATVSAGNGFPVAILNRNQPAFYCVPAELYEKMLDALDDQELVKLVTERSNQQLLDVDLDSYL
SIO_010081: GCU50_RS00085
subclass of: SO_0000673
so part of: GCU50_RS00085
location: complement(22340..22591)
location: region:22340-22591:-1
so has part: feature:22340-22591:-1:exon

WP_090127024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22340-22591:-1:exon

GCU50_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00090
so part of: sequence
location: 22983..24323
location: region:22983-24323:1
so has part: feature:22983-24323:1:exon
subclass of: SO_0000010

position:22983:1
position: 22983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24323:1
position: 24323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22983-24323:1:exon

GCU50_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495517.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVMKLVRKKAPRGGLIRWLDDDEETAIKNVAGRRVSTGREQYELAEKVLREMRQRETWLQCDCVPGDSPAMNSANLMQDTGTLFLSGFNHEHAPDCAMYRPFSGDAGATSSGTRKTAGSRRISYRDFLPLDDTDTRIKAPGRPVAPADDRTRRTRRSRIARLLLSLIEDAGLNRLATLHPLPSRGVMDSINALRTVTENIEFIRGRKLSEIVRFSPAMSENGRKKLMQELERPDTHWPAGKTRMFFQIFMSDQVTRDEVLFRWPGGELPFRPERGVSINGEAQDGARPPYWVILAFRRGIDGMVICSEGYAHALFRRGCPLPVDSGLERTTLESLSEVAVWLAKKPGTPALSLEKPLFDTEVNVDGEKGFVLPDFIITASKPGGKQHTVVVETMGYTDDDYCVRKAEQHKGMRQLGLLQTDPPRWPLELDKTFSRHVFGIFMNLDD
SIO_010081: GCU50_RS00090
subclass of: SO_0000673
so part of: GCU50_RS00090
location: 22983..24323
location: region:22983-24323:1
so has part: feature:22983-24323:1:exon

WP_090127022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22983-24323:1:exon

GCU50_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00095
so part of: sequence
location: complement(24414..24722)
location: region:24414-24722:-1
so has part: feature:24414-24722:-1:exon
subclass of: SO_0000010

position:24414:-1
position: 24414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24722:-1
position: 24722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24414-24722:-1:exon

GCU50_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495516.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVKKPSMQASATRTSVTDEEADALARRLSDKPYGSPEKIEEVKPEQEKQCRTTISLGESMLRKTEDLALQNKRNGRDPKNVSAIVREALELYFEKLSKNMNS
SIO_010081: GCU50_RS00095
subclass of: SO_0000673
so part of: GCU50_RS00095
location: complement(24414..24722)
location: region:24414-24722:-1
so has part: feature:24414-24722:-1:exon

WP_090127020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24414-24722:-1:exon

GCU50_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00100
so part of: sequence
location: complement(24725..25360)
location: region:24725-25360:-1
so has part: feature:24725-25360:-1:exon
subclass of: SO_0000010

position:24725:-1
position: 24725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25360:-1
position: 25360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24725-25360:-1:exon

GCU50_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495515.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MITVIGGNKGGSGKTTTAVNIAVALALKGQDVCLLNADLQRSAAKWHAEREAANIKPTITLIEKFDNLTSTLRALDEKYSHVIVDVAGRNSREFITSGVAAHQIIAPLQCSQPDLDTLVELQQQIEAMRDLNPDLKVFCLQSMGTTNPVLRGNERKEFLEYLEEFPTIKTMETVICFRKVYRDCMSNGTGVLETENKAAIEEIEQLVSEVF
SIO_010081: GCU50_RS00100
subclass of: SO_0000673
so part of: GCU50_RS00100
location: complement(24725..25360)
location: region:24725-25360:-1
so has part: feature:24725-25360:-1:exon

WP_090127052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24725-25360:-1:exon

GCU50_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
gene: repE
locus tag: GCU50_RS00105
so part of: sequence
location: complement(26101..26862)
location: region:26101-26862:-1
so has part: feature:26101-26862:-1:exon
subclass of: SO_0000010

position:26101:-1
position: 26101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26862:-1
position: 26862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26101-26862:-1:exon

GCU50_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
gene: repE
locus tag: GCU50_RS00105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495514.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein RepE
translation: MTETALINQPKRKNSPRIVQSNELTEAAYSLSRDQKRMLYLFVDQIRKSDGTLQEHDGICEIHVAQYASTFGLTSAEASKDIRQALKGFTGKEVVFYRPEEDSGDEKGYETYPWFIKRAHSPARGVYSVHINPYLIPFFIGLQNRFTQFRLSETKEITNPYAMRLYESLCQYRKPDGSGVVSLRVDWLMERYQLPQSYQRMPDFRRRFLQASVDEINSRTPMRLSYIEKKKGRQTTHIVFTFNDISSLSPSII
SIO_010081: GCU50_RS00105
subclass of: SO_0000673
so part of: GCU50_RS00105
location: complement(26101..26862)
location: region:26101-26862:-1
so has part: feature:26101-26862:-1:exon

WP_090127018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26101-26862:-1:exon

GCU50_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
gene: umuC
locus tag: GCU50_RS00110
pseudo: true
so part of: sequence
location: complement(27374..>28318)
location: region:27374-28318:-1
so has part: feature:27374-28318:-1:exon
subclass of: SO_0000010

position:27374:-1
position: 27374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28318:-1
position: 28318
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27374-28318:-1:exon

GCU50_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
gene: umuC
locus tag: GCU50_RS00110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008502211.1
GO function: GO:0003684 - damaged DNA binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: translesion error-prone DNA polymerase V subunit UmuC
SIO_010081: GCU50_RS00110
subclass of: SO_0000673
so part of: GCU50_RS00110
location: complement(27374..>28318)
location: region:27374-28318:-1
so has part: feature:27374-28318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27374-28318:-1:exon

GCU50_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
gene: parM
locus tag: GCU50_RS00120
so part of: sequence
location: 28908..29879
location: region:28908-29879:1
so has part: feature:28908-29879:1:exon
subclass of: SO_0000010

position:28908:1
position: 28908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29879:1
position: 29879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28908-29879:1:exon

GCU50_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
gene: parM
locus tag: GCU50_RS00120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017891108.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid segregation protein ParM
translation: MNLYCDDGSTNVKLAWFDGDELETRLSANSFRHGWKVADFGAGAFNYQIGNLKYTWDSVSRDAVPTTNVEYQYGDLNLLAVHHALLNSGLVPQEVTLTVTLPLSEYYDQDCQKNEVNIRRKRENLLRDIVVNKRERFVITDVTVMPESLPAAFTRLAELKPAPSETTLIIDIGGTTLDAGVIVGQFDDISAVHGNPSVGVSMVTRAAQAALRAAESETSPLIADTVVRNRKDRAFLNRIINDGNRIDYVTDKIEEAIDTLGSQVVSELARHRNVNRIFLVGGGAALIEPSVRKAWPLSAERIEVISDPQMALAREIARYHHEG
SIO_010081: GCU50_RS00120
subclass of: SO_0000673
so part of: GCU50_RS00120
location: 28908..29879
location: region:28908-29879:1
so has part: feature:28908-29879:1:exon

WP_167518496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28908-29879:1:exon

GCU50_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00125
so part of: sequence
location: 29882..30559
location: region:29882-30559:1
so has part: feature:29882-30559:1:exon
subclass of: SO_0000010

position:29882:1
position: 29882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30559:1
position: 30559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29882-30559:1:exon

GCU50_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495507.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning/stability family protein
translation: MPAGKYSFYLHTDDRTDMLAAGTLETVSQPLRGEFIRTAAIAGSVLYRADNRLPGLVTELFNGQLRYGQLVSLLAALTGQYDRALFPPAETLPGVTGSVSGQTDKTDRRRFTLLLPDSAESRQVAALLEGTPSRQRGMLLRNLIIAGFALHTLDPRLPRLLASMPVPPDSIEALRLLTSQVAGVTVSGTAEGAARASGGKEDSPPEQAAPPAEQSVLRQNMKKHF
SIO_010081: GCU50_RS00125
subclass of: SO_0000673
so part of: GCU50_RS00125
location: 29882..30559
location: region:29882-30559:1
so has part: feature:29882-30559:1:exon

WP_090127014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29882-30559:1:exon

GCU50_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00130
so part of: sequence
location: 30575..30832
location: region:30575-30832:1
so has part: feature:30575-30832:1:exon
subclass of: SO_0000010

position:30575:1
position: 30575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30832:1
position: 30832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30575-30832:1:exon

GCU50_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495506.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGRIKQSAEKLVTGFLRRAGVPEAQLHSRMRKTGRGLLLLSILFIVPLIILDHASLWAIILLQVIYGSLVCLGVLLAFDEENKTT
SIO_010081: GCU50_RS00130
subclass of: SO_0000673
so part of: GCU50_RS00130
location: 30575..30832
location: region:30575-30832:1
so has part: feature:30575-30832:1:exon

WP_090127012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30575-30832:1:exon

GCU50_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00135
so part of: sequence
location: 30874..31296
location: region:30874-31296:1
so has part: feature:30874-31296:1:exon
subclass of: SO_0000010

position:30874:1
position: 30874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31296:1
position: 31296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30874-31296:1:exon

GCU50_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00135
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFYKKALMLLIASIFPASAMAADDIQQAKVQDYCGKISSIIVQAAAEYNHQLSNAVKPDDAKISVIQKVKDSEDYLQASPAVKAEMDKAVNNSTNNVEYEKMMEEQDKIHERYVGMHAWTWAYHNATPFMAWCNYNHISG
SIO_010081: GCU50_RS00135
subclass of: SO_0000673
so part of: GCU50_RS00135
location: 30874..31296
location: region:30874-31296:1
so has part: feature:30874-31296:1:exon

WP_090127010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30874-31296:1:exon

GCU50_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00140
so part of: sequence
location: 31493..31729
location: region:31493-31729:1
so has part: feature:31493-31729:1:exon
subclass of: SO_0000010

position:31493:1
position: 31493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31729:1
position: 31729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31493-31729:1:exon

GCU50_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00140
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIVFAEVMLALELNPAEQLLVTATDIDPLAADMTFIQLSLLGIPAIVNTGNSLALTVNRTRHTPVYYFQSLGGPYPAA
SIO_010081: GCU50_RS00140
subclass of: SO_0000673
so part of: GCU50_RS00140
location: 31493..31729
location: region:31493-31729:1
so has part: feature:31493-31729:1:exon

WP_244316522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31493-31729:1:exon

GCU50_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00145
so part of: sequence
location: 31985..33511
location: region:31985-33511:1
so has part: feature:31985-33511:1:exon
subclass of: SO_0000010

position:31985:1
position: 31985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33511:1
position: 33511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31985-33511:1:exon

GCU50_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00145
inference: COORDINATES: protein motif:HMM:NF017539.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NACHT domain-containing protein
translation: MGEVTGTMLNSAANEAAKKTISSVYDFLVKKYELLDILKFKDHYLEYCEKNLNIKTLVSQDKCFHIDEIFVPIDLMASGTQTRQEVNNFTALDNDRAILIKGLAGQGKSTLLRKLLSNNAKRFSRLPVFYELKNYNGGTLELAISKSLSHFGVKISEYALKKLLSDSNVKIYLDAFDEVKPEFRNELIDEIKRFINSFNCHVICTSRPDTEIDTLSEFRTFSVCELTEEQIFGIIKMTASDQEKCDELCGALKRSPLHAKNDSILKSPILVVLFCLSYNLGENIPSTLSQFYSNIFDTVFYRHDNIKGKVYRERYWNDNRRIYRELFDCLCFVSLRDGLNGFNYEKLVHLVSTSLSYLNEENAIAEKIIKELLSITNLITEDGFNEYRFIHKSIQEFFAASFIISLPHNKKFSFYKKCFHDYSFYTTFNNSLFFLEELDYYNYFEYGFVPAVTDFLSLPSPCGKIDNYTIPTSICVVFLDKVYIRAKLNFFKTGNKESYEVEKNKLYI
SIO_010081: GCU50_RS00145
subclass of: SO_0000673
so part of: GCU50_RS00145
location: 31985..33511
location: region:31985-33511:1
so has part: feature:31985-33511:1:exon

WP_139234467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31985-33511:1:exon

GCU50_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00150
so part of: sequence
location: 33570..33818
location: region:33570-33818:1
so has part: feature:33570-33818:1:exon
subclass of: SO_0000010

position:33570:1
position: 33570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33818:1
position: 33818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33570-33818:1:exon

GCU50_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00150
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIELTNQELIKLIKMNESSLDDGFCKLSVRKILEFKNLPETTATEVLELGVDVLVRKKFNKAVDKLNNRKNLLNSTDYFNF
SIO_010081: GCU50_RS00150
subclass of: SO_0000673
so part of: GCU50_RS00150
location: 33570..33818
location: region:33570-33818:1
so has part: feature:33570-33818:1:exon

WP_167518493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33570-33818:1:exon

GCU50_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00155
so part of: sequence
location: 34191..34655
location: region:34191-34655:1
so has part: feature:34191-34655:1:exon
subclass of: SO_0000010

position:34191:1
position: 34191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34655:1
position: 34655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34191-34655:1:exon

GCU50_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495627.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKLTRITLSSGEMAIYLDGWYLISTEPGDRADGLDDIITGLLSIPGMTLQDIDAPCPAHEDWCWNDVADGVFAARQPDAGECTVAAFTDRLSRYPADALCCGTFWLREDFLALDASLTDEQIRLAMKVAQKNHDAAIGLNWDVLQMAIDSVKS
SIO_010081: GCU50_RS00155
subclass of: SO_0000673
so part of: GCU50_RS00155
location: 34191..34655
location: region:34191-34655:1
so has part: feature:34191-34655:1:exon

WP_090127004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34191-34655:1:exon

GCU50_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00160
so part of: sequence
location: 35141..35794
location: region:35141-35794:1
so has part: feature:35141-35794:1:exon
subclass of: SO_0000010

position:35141:1
position: 35141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35794:1
position: 35794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35141-35794:1:exon

GCU50_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495625.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA methyltransferase
translation: MSRFMQGDSVQLMATFPDTSIDFILTDPPYLVGFKDRSGRSIANDVNDEWVLPASQQMYRVLKNNSLAVSFYGWNRVDIFMQAWKAAGFRVVGHLVFTKSYASKSAFVGYQHESAYVLAKGRPALPQNPLPDVMPWEYTGNRHHPTEKPVSILRPLIESFTRPGDLVLDPFAGSGSTCVAADQCGRRWIGIELMAQYHATGLRRLGEQRALMHPAAA
SIO_010081: GCU50_RS00160
subclass of: SO_0000673
so part of: GCU50_RS00160
location: 35141..35794
location: region:35141-35794:1
so has part: feature:35141-35794:1:exon

WP_090127002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35141-35794:1:exon

GCU50_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00165
so part of: sequence
location: 35880..36290
location: region:35880-36290:1
so has part: feature:35880-36290:1:exon
subclass of: SO_0000010

position:35880:1
position: 35880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36290:1
position: 36290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35880-36290:1:exon

GCU50_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495624.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1380 family protein
translation: MLYGTRKELNKKLKRAFGDTEKFALLVWTRETVMGAAEDMTEQEADHILAEIGSTGSGDHAEEGISFGTVLELLAGLRAAPQMVSVPAALLEQVSNWAERCLNEEDVRAGNAGRSTPETVARGLAALNALKQLMAA
SIO_010081: GCU50_RS00165
subclass of: SO_0000673
so part of: GCU50_RS00165
location: 35880..36290
location: region:35880-36290:1
so has part: feature:35880-36290:1:exon

WP_090127000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35880-36290:1:exon

GCU50_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00170
so part of: sequence
location: 36302..36538
location: region:36302-36538:1
so has part: feature:36302-36538:1:exon
subclass of: SO_0000010

position:36302:1
position: 36302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36538:1
position: 36538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36302-36538:1:exon

GCU50_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495623.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGQTPETATGSELMADVAAIDDALTAVYLRIHTMRQRWPRDSDRVETRLAMLAVEDINDALHDASRRVARLRRCLSR
SIO_010081: GCU50_RS00170
subclass of: SO_0000673
so part of: GCU50_RS00170
location: 36302..36538
location: region:36302-36538:1
so has part: feature:36302-36538:1:exon

WP_090126998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36302-36538:1:exon

GCU50_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00175
so part of: sequence
location: 36995..37432
location: region:36995-37432:1
so has part: feature:36995-37432:1:exon
subclass of: SO_0000010

position:36995:1
position: 36995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37432:1
position: 37432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36995-37432:1:exon

GCU50_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495621.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antirestriction protein
translation: MHTSTPDFQPARVLDGYVSLSFLHALFGDDCIRAENNVYLYASRYLDGYDGGVWAYAALPEGGGFMKPEGEERWHFVNPQNFADLTLGSEAAGIVITALVLNHRSWMYDHHDEEELCRLYCQRHRQLMAYAESHPEAAAIFRALD
SIO_010081: GCU50_RS00175
subclass of: SO_0000673
so part of: GCU50_RS00175
location: 36995..37432
location: region:36995-37432:1
so has part: feature:36995-37432:1:exon

WP_090126996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36995-37432:1:exon

GCU50_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00180
so part of: sequence
location: 37478..37732
location: region:37478-37732:1
so has part: feature:37478-37732:1:exon
subclass of: SO_0000010

position:37478:1
position: 37478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37732:1
position: 37732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37478-37732:1:exon

GCU50_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00180
inference: COORDINATES: protein motif:HMM:NF018792.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1380 family protein
translation: MYGTVNALCAKLTEKYTPDEPLTLIVWAKEDVLACLDDDSVTEDTAAQIVGLIAGLDGLHEGGVGVETLLCLLENLRAEEARPF
SIO_010081: GCU50_RS00180
subclass of: SO_0000673
so part of: GCU50_RS00180
location: 37478..37732
location: region:37478-37732:1
so has part: feature:37478-37732:1:exon

WP_139234466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37478-37732:1:exon

GCU50_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00185
so part of: sequence
location: 37755..37967
location: region:37755-37967:1
so has part: feature:37755-37967:1:exon
subclass of: SO_0000010

position:37755:1
position: 37755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37967:1
position: 37967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37755-37967:1:exon

GCU50_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00185
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNGSERVLFSTRMYQRFSDMKSGVIATVDVCEGRSSESDKRQAEAGKRLLAVLDKYPSFAALAKHPDRLN
SIO_010081: GCU50_RS00185
subclass of: SO_0000673
so part of: GCU50_RS00185
location: 37755..37967
location: region:37755-37967:1
so has part: feature:37755-37967:1:exon

WP_175539151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37755-37967:1:exon

GCU50_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00190
so part of: sequence
location: 38036..40042
location: region:38036-40042:1
so has part: feature:38036-40042:1:exon
subclass of: SO_0000010

position:38036:1
position: 38036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40042:1
position: 40042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38036-40042:1:exon

GCU50_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495617.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MVSTNTTAKPATKSTRKKVSADVLAAEETLRLAPVGYAPFSRFVTSEYNARIIQHTDDEIAAMAASIRSLGILHNLVVVENADGTLGVVCGNGRRRGTGLLVEQGVIGAGEPFIPYKVIPNELARAASLAEDSHKAMHPAEQIIGFRAMAAEGSTPAQIGDLFGFSPRHVQRILSLANLAPALLDELTQDRITLELCQVMTLEHDQARQLEIWNQAKATFGSGMPYVSWLKSQISNIKINMATAMFRFVGEEAYLAAGGITDRDLFSDEGEGFADRLLTERLLREKLAAEAERLKQEEGWAWCDSRMDELREDAEWRLPEPELTAEEEAAIQKLLDQIDVCEAEDDENSLQQQIEDTEEAAMMRMFTPEFKAAHSVVVSYECGSYNVQRGVKHMDATEDSGTGTGDAGTESRLPETTGKTLAYTSTRTRIEADKYSEKLVRAMSSERTLAVQAELAGKPDIAVALLVWTLCREVFGARHNHLVKLPLDITLRQQWGLTTDAPSGEKGQGYTTLLDMKRALKAGLPPEWEQDFTWLLTWPVDRLHALLGFCIATGISGQQGREMGYTRASKLDNLEAAMDFDLRDWWQPGAENYFGRISKDQIGDALAEAGCEDRAREALKLKKTEAALLAEKTIAETRWIPGWMKLPEPEEQQDTAEASNITHTDHAA
SIO_010081: GCU50_RS00190
subclass of: SO_0000673
so part of: GCU50_RS00190
location: 38036..40042
location: region:38036-40042:1
so has part: feature:38036-40042:1:exon

WP_090126994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38036-40042:1:exon

GCU50_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
gene: psiB
locus tag: GCU50_RS00195
so part of: sequence
location: 40085..40516
location: region:40085-40516:1
so has part: feature:40085-40516:1:exon
subclass of: SO_0000010

position:40085:1
position: 40085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40516:1
position: 40516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40085-40516:1:exon

GCU50_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
gene: psiB
locus tag: GCU50_RS00195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495616.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugation system SOS inhibitor PsiB
translation: MKKYTLDVLNGMFPADLESVRESGDEERRQLSDAATCLVALPAGWRVNAEYRSEFGGQFPVQLRYAPNGENHYFLCLCSPGEMLPAWTLFLLARDGRLIRILHQSGAFMPEKIGGLLAQVAGMHRFNCTAATIAELMHAEVVS
SIO_010081: GCU50_RS00195
subclass of: SO_0000673
so part of: GCU50_RS00195
location: 40085..40516
location: region:40085-40516:1
so has part: feature:40085-40516:1:exon

WP_090126992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40085-40516:1:exon

GCU50_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00200
so part of: sequence
location: 40513..41259
location: region:40513-41259:1
so has part: feature:40513-41259:1:exon
subclass of: SO_0000010

position:40513:1
position: 40513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41259:1
position: 41259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40513-41259:1:exon

GCU50_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495615.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid SOS inhibition protein A
translation: MIPASHSLVTFNPARQAALQAIAEVEQRREERKRLSDDHPVTRAFLRRLTGQSRLTHNTARLIPGLAWDPSFRFWTLNKLENALERLLVSQGEHCFSPMSEAVQQCLFPDVVWRNTSRAEKRAKLRWHKVQRREDKRRCHEAMLHQSLVARARVDLNFQSPETVGAWYSRWSDELHEYELAPMFWLWRRRFVSLDELLWHWDAGDPLWVVFSVLRDIVNEQPDCLRGADRRSVPDKLSHSEEGGANAG
SIO_010081: GCU50_RS00200
subclass of: SO_0000673
so part of: GCU50_RS00200
location: 40513..41259
location: region:40513-41259:1
so has part: feature:40513-41259:1:exon

WP_090126990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40513-41259:1:exon

GCU50_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00205
so part of: sequence
location: 41249..41476
location: region:41249-41476:1
so has part: feature:41249-41476:1:exon
subclass of: SO_0000010

position:41249:1
position: 41249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41476:1
position: 41476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41249-41476:1:exon

GCU50_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495614.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLAKKLTLADREALEMMPGGWFILRDVPALLNRSAWRLERLVSAGVVQSRIRGTYPDYVMEYRVLSAEVAPGETR
SIO_010081: GCU50_RS00205
subclass of: SO_0000673
so part of: GCU50_RS00205
location: 41249..41476
location: region:41249-41476:1
so has part: feature:41249-41476:1:exon

WP_090126988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41249-41476:1:exon

GCU50_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00210
so part of: sequence
location: 41463..41687
location: region:41463-41687:1
so has part: feature:41463-41687:1:exon
subclass of: SO_0000010

position:41463:1
position: 41463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41687:1
position: 41687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41463-41687:1:exon

GCU50_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00210
inference: COORDINATES: protein motif:HMM:NF025712.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lar family restriction alleviation protein
translation: MRHDNVRPCPFCGCNVIRIRRLSGYFRASCCGCEATASFQESEQEVVNRWNRRVNDTHQSGAICQGKDMKNQQK
SIO_010081: GCU50_RS00210
subclass of: SO_0000673
so part of: GCU50_RS00210
location: 41463..41687
location: region:41463-41687:1
so has part: feature:41463-41687:1:exon

WP_090126986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41463-41687:1:exon

GCU50_RS25345
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS25345
pseudo: true
so part of: sequence
location: 41843..>41992
location: region:41843-41992:1
so has part: feature:41843-41992:1:exon
subclass of: SO_0000010

position:41843:1
position: 41843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41992:1
position: 41992
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41843-41992:1:exon

GCU50_RS25345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS25345
inference: COORDINATES: protein motif:HMM:NF036604.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF5431 family protein
SIO_010081: GCU50_RS25345
subclass of: SO_0000673
so part of: GCU50_RS25345
location: 41843..>41992
location: region:41843-41992:1
so has part: feature:41843-41992:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41843-41992:1:exon

GCU50_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00215
so part of: sequence
location: 41940..42059
location: region:41940-42059:1
so has part: feature:41940-42059:1:exon
subclass of: SO_0000010

position:41940:1
position: 41940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42059:1
position: 42059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41940-42059:1:exon

GCU50_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00215
inference: COORDINATES: similar to AA sequence:RefSeq:NP_052660.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I toxin-antitoxin system Hok family toxin
translation: MVCLTLLIFTWLTRKSLCEIRYRDGSREVAALMAYESGK
SIO_010081: GCU50_RS00215
subclass of: SO_0000673
so part of: GCU50_RS00215
location: 41940..42059
location: region:41940-42059:1
so has part: feature:41940-42059:1:exon

WP_274349933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41940-42059:1:exon

GCU50_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00220
so part of: sequence
location: complement(42251..42496)
location: region:42251-42496:-1
so has part: feature:42251-42496:-1:exon
subclass of: SO_0000010

position:42251:-1
position: 42251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42496:-1
position: 42496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42251-42496:-1:exon

GCU50_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495612.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2767 family protein
translation: MSEDDAEEAFYDETCRIVGQCCLMLASNGAETDRAQLVYQLKRLYWLIMVATEKHHTGILLAIEQLETPEMYEERTGRRRE
SIO_010081: GCU50_RS00220
subclass of: SO_0000673
so part of: GCU50_RS00220
location: complement(42251..42496)
location: region:42251-42496:-1
so has part: feature:42251-42496:-1:exon

WP_090126984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42251-42496:-1:exon

GCU50_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
gene: trbC
locus tag: GCU50_RS00230
so part of: sequence
location: 42693..43301
location: region:42693-43301:1
so has part: feature:42693-43301:1:exon
subclass of: SO_0000010

position:42693:1
position: 42693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43301:1
position: 43301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42693-43301:1:exon

GCU50_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
gene: trbC
locus tag: GCU50_RS00230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495587.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system pilin assembly protein TrbC
translation: MKKVLFRALLASSLVICLSAAASEQAGVSANDRAWMKQQQDALQSFKESLKDTSMSLPPAQQDLVTRLQQGIAKDQPDTEKKTFPAIYFVSLGLPREGLLPMLQDAHRYGIPATIRGLLNNDLRQTANAMFQLTKEDKNIGVQVDPTLFSDYHITAIPALVVNCPGHSDVIRGSLPLKQALEKVAEHGDCAATARELLEASR
SIO_010081: GCU50_RS00230
subclass of: SO_0000673
so part of: GCU50_RS00230
location: 42693..43301
location: region:42693-43301:1
so has part: feature:42693-43301:1:exon

WP_090126982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42693-43301:1:exon

GCU50_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
gene: traN
locus tag: GCU50_RS00235
so part of: sequence
location: 43298..45142
location: region:43298-45142:1
so has part: feature:43298-45142:1:exon
subclass of: SO_0000010

position:43298:1
position: 43298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45142:1
position: 45142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43298-45142:1:exon

GCU50_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
gene: traN
locus tag: GCU50_RS00235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007853408.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system mating-pair stabilization protein TraN
translation: MKRFIILAALLLAGGALADANSDAFNAGASFGKGNSSQGTSSLSNPGSVTGSIPGYTSSPPESGYYGGVTGGDGGLSDKGQQALQNNDAGQTVIDSGTKNPSPVIDPNAPYITIGKGAESTAGSVLDGTGSQCTSTTVSKSTFENYTCDRDVAVIQTCGRTASITGSYQDNYTYQTVTIDSGNLDVSTINASWPMPAGTVYSASMTYTFKKSLAQSNGNWFLNITALGTLMTMYGNSGSYNLPAGRTFAQGENLTITFGNHDNNPQIIPQIWEMGKDSQMFHFVITIVFRTGTRVWVPQTTWSESCGFDKTKALSSAGSVCTDPGGTRTVTVDGKQYSQTNSCWAYTDSYVTVTDSKGNCASLMSDPACTLSSHTCTTTESGVCTHQSETYQCQKTYSSSGLVCGGQYFCKTGDCSDTDGTGDSGFDTAVAKLAGLASAGDDIINDQINVKAFTGQAMSCRKAFAGFSNCCKDSGWGSDAGLASCNSDEMALGKAKAKKVTVSVGDRCDHQVLGVCVQKSQVYCVFGGKLARIIMEQGRRDQLGIGFGSGDSPNCSGITVPQLQAINFDLINFQDFYSDLIANQKIPDTSVMVQQVKDKIAAQVQQQQSSGGAK
SIO_010081: GCU50_RS00235
subclass of: SO_0000673
so part of: GCU50_RS00235
location: 43298..45142
location: region:43298-45142:1
so has part: feature:43298-45142:1:exon

WP_090126980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43298-45142:1:exon

GCU50_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
gene: traF
locus tag: GCU50_RS00240
so part of: sequence
location: 45139..45927
location: region:45139-45927:1
so has part: feature:45139-45927:1:exon
subclass of: SO_0000010

position:45139:1
position: 45139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45927:1
position: 45927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45139-45927:1:exon

GCU50_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
gene: traF
locus tag: GCU50_RS00240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495585.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system pilin assembly protein TraF
translation: MIKRLLTLLMVVLALPATGEEIISPAPPFTGWSWYNEPKTPPKPEPAPSREQPEKPDIPDFSKMSAVEQAKVLQAYTREALNRAILYPTRENTATYLKWQKFWTDRSSMFSQSFAAAQLTHPELDYNLEYPHYNSMAPLVQTRDQQQRQQAIADLGQQYGMFYFYRGSDPIDTQMAGVVADFSKANHLSLIPVSVDGQVAPSLPDSRPDTGQIQAMRITHFPALFLVDPRNRDYQPLVYGFMTQDDLARRFLNVSTGFKPNF
SIO_010081: GCU50_RS00240
subclass of: SO_0000673
so part of: GCU50_RS00240
location: 45139..45927
location: region:45139-45927:1
so has part: feature:45139-45927:1:exon

WP_090126978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45139-45927:1:exon

GCU50_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00245
so part of: sequence
location: 46022..46249
location: region:46022-46249:1
so has part: feature:46022-46249:1:exon
subclass of: SO_0000010

position:46022:1
position: 46022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46249:1
position: 46249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46022-46249:1:exon

GCU50_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00245
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMKPLSLSEIVVIFFAGILFKCLGDITGVYPHLSQLMCLWGSYLLMVFAGLLLACNRWWHWRHRHDVPPEASDEK
SIO_010081: GCU50_RS00245
subclass of: SO_0000673
so part of: GCU50_RS00245
location: 46022..46249
location: region:46022-46249:1
so has part: feature:46022-46249:1:exon

WP_139234464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46022-46249:1:exon

GCU50_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
gene: trbB
locus tag: GCU50_RS00250
so part of: sequence
location: 46239..46841
location: region:46239-46841:1
so has part: feature:46239-46841:1:exon
subclass of: SO_0000010

position:46239:1
position: 46239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46841:1
position: 46841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46239-46841:1:exon

GCU50_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
gene: trbB
locus tag: GCU50_RS00250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011906574.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F-type conjugal transfer protein TrbB
translation: MKSSALSVLLLLFPLLASAGAREEIAAIDAAKATQSQPDAGTVKQPATATPVLMQLPDGRRADMADYAVVVFMQSHCQYSAKFDPDLKRWADEHRIRVYPYTLDGGGDASFPVPLIPRKTDPASPLADEIMTFFGNGLPIATPTAFMVNVHTLKAYPLTQGVMDITTLEDRYASLIQADMDQVDPRSLPPMPANAQVTPQ
SIO_010081: GCU50_RS00250
subclass of: SO_0000673
so part of: GCU50_RS00250
location: 46239..46841
location: region:46239-46841:1
so has part: feature:46239-46841:1:exon

WP_090126974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46239-46841:1:exon

GCU50_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
gene: traH
locus tag: GCU50_RS00255
so part of: sequence
location: 46969..48333
location: region:46969-48333:1
so has part: feature:46969-48333:1:exon
subclass of: SO_0000010

position:46969:1
position: 46969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48333:1
position: 48333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46969-48333:1:exon

GCU50_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
gene: traH
locus tag: GCU50_RS00255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495580.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer pilus assembly protein TraH
translation: MLKPFLIAALVFMAGMASLPARADVNGDLNGFFGSLGYSGNVTQAQAWQGQAAGYFTGGSVYLRNPVKNVQLISMQVPSLNAGCGGIDAYLGAFSMINGEEIQRFVKQIMSNATGYAFDLALQTMVPELKQAKDFLQKLASDVNSANMSSCQAAQGIIGGLWPVTQVSQQKICQDIAGESNLFSDWAASRQGCTVGGQSDSVTSRAGDSQKDQVLKNKNLIWDALSRNHLFDSNRELKELVMSTVGSIIFNNAGQVTILTPLVDNRDLIKVLMRGGSAKVYGCDEATLCLGPVVKDVTIDEGNGLVTLVKNLMLSMQSKLVDDTALNDQEKGFVNTTSVPVLKYLTNAQSMGQSATYLIQVSDFIAQDLMIQYLQELVKQASLSMAGKNWPEEAASKLRDNVIHAQGLLADMKLQSAADQNALDGIDRNMQYLQQQVSTIVSGSYQSNYHWGNP
SIO_010081: GCU50_RS00255
subclass of: SO_0000673
so part of: GCU50_RS00255
location: 46969..48333
location: region:46969-48333:1
so has part: feature:46969-48333:1:exon

WP_090126972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46969-48333:1:exon

GCU50_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
gene: traG
locus tag: GCU50_RS00260
pseudo: true
so part of: sequence
location: 48333..>50087
location: region:48333-50087:1
so has part: feature:48333-50087:1:exon
subclass of: SO_0000010

position:50087:1
position: 50087
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48333-50087:1:exon

GCU50_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
gene: traG
locus tag: GCU50_RS00260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008324894.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: conjugal transfer mating-pair stabilization protein TraG
SIO_010081: GCU50_RS00260
subclass of: SO_0000673
so part of: GCU50_RS00260
location: 48333..>50087
location: region:48333-50087:1
so has part: feature:48333-50087:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48333-50087:1:exon

GCU50_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
gene: repA
locus tag: GCU50_RS00265
so part of: sequence
location: 50092..50451
location: region:50092-50451:1
so has part: feature:50092-50451:1:exon
subclass of: SO_0000010

position:50092:1
position: 50092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50451:1
position: 50451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50092-50451:1:exon

GCU50_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
gene: repA
locus tag: GCU50_RS00265
inference: COORDINATES: protein motif:HMM:NF040977.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication initiator RepA
translation: MDTDKLRAEQAERLAAISDGLLAPGETLSLKAARSRWYERCRNQTILTRRTRAIEGKQRRKLAELPFDERKRQISEGLMRSLKGDVGHMTSHQFEKMVWAQLYQLELVNLEPPGTPPPH
SIO_010081: GCU50_RS00265
subclass of: SO_0000673
so part of: GCU50_RS00265
location: 50092..50451
location: region:50092-50451:1
so has part: feature:50092-50451:1:exon

WP_280116117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50092-50451:1:exon

GCU50_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00270
pseudo: true
so part of: sequence
location: complement(<51448..52058)
location: region:51448-52058:-1
so has part: feature:51448-52058:-1:exon
subclass of: SO_0000010

position:51448:-1
position: 51448
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:52058:-1
position: 52058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51448-52058:-1:exon

GCU50_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611476.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: GCU50_RS00270
subclass of: SO_0000673
so part of: GCU50_RS00270
location: complement(<51448..52058)
location: region:51448-52058:-1
so has part: feature:51448-52058:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51448-52058:-1:exon

GCU50_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00275
so part of: sequence
location: complement(52232..52585)
location: region:52232-52585:-1
so has part: feature:52232-52585:-1:exon
subclass of: SO_0000010

position:52232:-1
position: 52232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52585:-1
position: 52585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52232-52585:-1:exon

GCU50_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00275
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRILREGLADGKAGELFKAKELAVAARNAANMVAQQAFATAFEACAAVGSMPAFNWALIDQAIEKRVADLIAEKVSLTQLQQDGQRLQLEKRVKQLRALQWLFQISPSASVWSQWIC
SIO_010081: GCU50_RS00275
subclass of: SO_0000673
so part of: GCU50_RS00275
location: complement(52232..52585)
location: region:52232-52585:-1
so has part: feature:52232-52585:-1:exon

WP_175539150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52232-52585:-1:exon

GCU50_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00280
pseudo: true
so part of: sequence
location: complement(52613..>52804)
location: region:52613-52804:-1
so has part: feature:52613-52804:-1:exon
subclass of: SO_0000010

position:52613:-1
position: 52613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52804:-1
position: 52804
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52613-52804:-1:exon

GCU50_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558297.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: GCU50_RS00280
subclass of: SO_0000673
so part of: GCU50_RS00280
location: complement(52613..>52804)
location: region:52613-52804:-1
so has part: feature:52613-52804:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52613-52804:-1:exon

GCU50_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00285
so part of: sequence
location: complement(52983..53519)
location: region:52983-53519:-1
so has part: feature:52983-53519:-1:exon
subclass of: SO_0000010

position:52983:-1
position: 52983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53519:-1
position: 53519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52983-53519:-1:exon

GCU50_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFAKTITFACFLFVFFNETASAESLSGRATHDIDFSFQAPSQSILFNYITTPNLVAGEVKENFRLATFNLSPVSDSGASVVKLGIAWDADAPYMVVDSGAGTVAHLKNLGVSDDAAPLHVFLDFDKPATPIEVNGAIYNTQDLLTGEKMQGSIRVFRDQLATPGIYRATLLTAIINP
SIO_010081: GCU50_RS00285
subclass of: SO_0000673
so part of: GCU50_RS00285
location: complement(52983..53519)
location: region:52983-53519:-1
so has part: feature:52983-53519:-1:exon

WP_139234463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52983-53519:-1:exon

GCU50_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
gene: afaD
locus tag: GCU50_RS00290
so part of: sequence
location: complement(53581..54030)
location: region:53581-54030:-1
so has part: feature:53581-54030:-1:exon
subclass of: SO_0000010

position:53581:-1
position: 53581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54030:-1
position: 54030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53581-54030:-1:exon

GCU50_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
gene: afaD
locus tag: GCU50_RS00290
inference: COORDINATES: protein motif:HMM:NF017581.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AfaD family invasin
translation: MKTKIFSPFVFLMAVIMLSSVRQAIASEVTMPTIDFNMLALQKAGSISDGTLLGQGRITYSDSHAGFILGADADKTNRPGGYMLSGVNNTNNKLYIRMESEGAMEDTQQRGIIILTDQNSAAFRIKVDGNQNITSDKWRLSLHAVAILP
SIO_010081: GCU50_RS00290
subclass of: SO_0000673
so part of: GCU50_RS00290
location: complement(53581..54030)
location: region:53581-54030:-1
so has part: feature:53581-54030:-1:exon

WP_090126966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53581-54030:-1:exon

GCU50_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00295
so part of: sequence
location: complement(54053..56569)
location: region:54053-56569:-1
so has part: feature:54053-56569:-1:exon
subclass of: SO_0000010

position:54053:-1
position: 54053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56569:-1
position: 56569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54053-56569:-1:exon

GCU50_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00295
inference: COORDINATES: protein motif:HMM:NF012786.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015473 - fimbrial usher porin activity [Evidence IEA]
GO process: GO:0009297 - pilus assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fimbria/pilus outer membrane usher protein
translation: MNRVITQKKYAVGIIAYILCSPSYAESYKFDPKMAGISDPNVDFSVFNLGLQQPGMYTVDVYINGNRVDNRDINFSLRQHGDETLLYPCLSLEDLYRYGVDTQSKPDIKLNNSCVDLFSIVDARFNFDFYNQQLLLSIPQSRMSAIITGIAPRALWDDGVPAFLMNYSANTTHSESSYQDGNKQKTDSTYVQLNPGINIGSWRMRSQTNWQTNSSGHSGWETPYTYLERGLYDIKSSLVLGDRYTPGDVFDSISFRGIMLGTNENMTPYQLRSYSPVITGIARTQARVEVKQRGYTIYSTIVPPGPFSLTDFSTSGDSGGDLQVTVLETDGSPQFFTVPYQTPAIALKENYMKYNFMAGQYRNSGLDTDKSIMFQGTLMYGLPWDLTLYGGMQYADHYYSSSLGMGISMGSFGALSTDITGSHAKRKQSDTEEGVAMRARYSKYMVSTETNFTLAAYRYATRGFNSLEQVMASYGKDLDSSNNWYSGIQDRIKSQGRMSIQQTMGKLGTLSLNLSANDYWDCAGNNYSVGLGYGFTIFNKAQTSFNFNENHYNSCRSSTSRDRLFGMWFSFPLGGWGGDNTRASFQMTSESENRNTYTAGLSGSSLNNRFNWDIRQSHRDKQGAGSDTSFVNTGWNGSYGQVGISHFYSNSMRQTSANVNGGALLYKNGLVLGQSINDAVSVVEAPGARGVSVMGMNGVKTDFRGYAINTNLVPYQENLISIDPLNISSDAEITQTDVKVVPTEGAVIPAKFNTRVGAKGLFKITYHGEVVPLGGVVSVVGKDGNAGIVGRDGEAYLTGLPDSGELSVKWNNGNCKAAYTLPSSGKATGLQQVTVLCR
SIO_010081: GCU50_RS00295
subclass of: SO_0000673
so part of: GCU50_RS00295
location: complement(54053..56569)
location: region:54053-56569:-1
so has part: feature:54053-56569:-1:exon

WP_090126964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54053-56569:-1:exon

GCU50_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00300
so part of: sequence
location: complement(56603..57397)
location: region:56603-57397:-1
so has part: feature:56603-57397:-1:exon
subclass of: SO_0000010

position:56603:-1
position: 56603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57397:-1
position: 57397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56603-57397:-1:exon

GCU50_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00300
inference: COORDINATES: protein motif:HMM:NF012565.2
GO process: GO:0061077 - chaperone-mediated protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone
translation: MFLTFQRYSIACILINAMFFISFAYAEQPEQKQAGKTKIEQKTTSYSVGISTTRIIYDPESSGASVGINNPNDYPVLAMSETFTEDSKDKGNFTVVPPLFRLDGNQNSRVRIIHTSSSFPADRESLNWFCVTGIPPEKGDQWDEGSKKEVRDNKAFLDIRVKLKQCIKILVRPAGIKGRADEAPSKVTWKISGKEIIADNPTGYYINLKMLSVGSSNITEPEYIPPFGSKKYTLPAGTGSSREIKFTSINDLGGVSATVSPSLH
SIO_010081: GCU50_RS00300
subclass of: SO_0000673
so part of: GCU50_RS00300
location: complement(56603..57397)
location: region:56603-57397:-1
so has part: feature:56603-57397:-1:exon

WP_167518494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56603-57397:-1:exon

GCU50_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00305
so part of: sequence
location: complement(58376..59008)
location: region:58376-59008:-1
so has part: feature:58376-59008:-1:exon
subclass of: SO_0000010

position:58376:-1
position: 58376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59008:-1
position: 59008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58376-59008:-1:exon

GCU50_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00305
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MNKINVSIVSSNVYFNLGIKFLVEHNLASLLPGHRIMCSIKTSFYDSFYFSDDSEHRIVIMDLDTSDETLYEGLKFITQIQENHENIRIVVITRYTNPLVIKAISNRKPSVIMLQQEPLSVITQYLGITFSTFYVNEITLLSPIASSILSYARDLKCSPRELEIVVCQQDGLSLKETAKIMNIPYKKVSFLKCNLTRKLGSSEINTYTLG
SIO_010081: GCU50_RS00305
subclass of: SO_0000673
so part of: GCU50_RS00305
location: complement(58376..59008)
location: region:58376-59008:-1
so has part: feature:58376-59008:-1:exon

WP_090126959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58376-59008:-1:exon

GCU50_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00310
so part of: sequence
location: 59409..60152
location: region:59409-60152:1
so has part: feature:59409-60152:1:exon
subclass of: SO_0000010

position:59409:1
position: 59409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60152:1
position: 60152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59409-60152:1:exon

GCU50_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00310
inference: COORDINATES: protein motif:HMM:NF012698.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix-turn-helix domain-containing protein
translation: MKITINDIAILDTKHCTLYLKDSREIFVELSETATFLFKILLLRNKEVILRDDLLKTVWEDRGYRTSNSSLNNNVHAIRKSYSDITGDGLQLRTIPKVGFEMFCDSVSIDESVVELYEHAVEGVSKKRIRRLAYLFSFLIVFLFSALIYYLITPSNYIKDKDNPLLLSQVSQCSLYLLNTYNYDKNFSTDISEFKKNLNVKECSDRKIDFFYEKDVMNPKNLFYVRCEKSASGYSECSTTKNVFIDN
SIO_010081: GCU50_RS00310
subclass of: SO_0000673
so part of: GCU50_RS00310
location: 59409..60152
location: region:59409-60152:1
so has part: feature:59409-60152:1:exon

WP_090126957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59409-60152:1:exon

GCU50_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00315
so part of: sequence
location: 60162..60644
location: region:60162-60644:1
so has part: feature:60162-60644:1:exon
subclass of: SO_0000010

position:60162:1
position: 60162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60644:1
position: 60644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60162-60644:1:exon

GCU50_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00315
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQTHNKIIATLSIGMMSVAFFLIYMSQFKTDRFFTCKSGVNYTVKFSNNSYYLKAAYAIIIDDMKYSTLTINGKLQYGDTTTVLNRSYIMNMTNAKGNYFKVVITSQDINDTDTTDDTVFLKFFMPQKVGVPFYMQISNIKENIFILRGLSAPYLACLSY
SIO_010081: GCU50_RS00315
subclass of: SO_0000673
so part of: GCU50_RS00315
location: 60162..60644
location: region:60162-60644:1
so has part: feature:60162-60644:1:exon

WP_090126955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60162-60644:1:exon

GCU50_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00320
so part of: sequence
location: 60924..61919
location: region:60924-61919:1
so has part: feature:60924-61919:1:exon
subclass of: SO_0000010

position:60924:1
position: 60924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61919:1
position: 61919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60924-61919:1:exon

GCU50_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014172315.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MTTFHDDKHSFPSSHQVPIYDGADFPAHLVSDTVTSLNPALAYLLSLNSARSRRTMVSVLNIVARVLGASDLSDCNWAVLRRHHVLALTEMLRDAGLAVATVNTYLSALRGVAMEAWMLKLMHVEDYQHIRAVRSVRGSTLPRGRALSREEIRELFMVCGADRSSKGPRDAALLAVLLGCGLRRSEAVALNYENILTGDRALKVLGKGNKERMAYIPAGTWQRLELWTDQVRGEHPGPLFTRIRRHDVVTDDRLTDQAVYHILQERQREAGLEKCAPHDLRRTFATAMLDNGEDLITLKDAMGHASVTTTQKYDRRGEDKLRRARDRLIIS
SIO_010081: GCU50_RS00320
subclass of: SO_0000673
so part of: GCU50_RS00320
location: 60924..61919
location: region:60924-61919:1
so has part: feature:60924-61919:1:exon

WP_090126953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60924-61919:1:exon

GCU50_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00325
so part of: sequence
location: complement(61998..62492)
location: region:61998-62492:-1
so has part: feature:61998-62492:-1:exon
subclass of: SO_0000010

position:61998:-1
position: 61998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62492:-1
position: 62492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61998-62492:-1:exon

GCU50_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00325
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIYSRIIFTLVTLTFSSFSYSEAVEENQKIDIDLAFSVPSAPLSFILKTLDNLHTGIFADRYPVAYIELNATQLSQIGVRWSPTLPGITTSAKKIYGINNSKNELSLAFDTEGLIPQREESDTYYVTKEGVNNFETTVFVIPGTEIRADSYEIIIDAAIYTR
SIO_010081: GCU50_RS00325
subclass of: SO_0000673
so part of: GCU50_RS00325
location: complement(61998..62492)
location: region:61998-62492:-1
so has part: feature:61998-62492:-1:exon

WP_090126951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61998-62492:-1:exon

GCU50_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00330
so part of: sequence
location: complement(62749..63558)
location: region:62749-63558:-1
so has part: feature:62749-63558:-1:exon
subclass of: SO_0000010

position:62749:-1
position: 62749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63558:-1
position: 63558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62749-63558:-1:exon

GCU50_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00330
inference: COORDINATES: protein motif:HMM:NF012772.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MTQSSLCVEASLRDFYITPSSLRKAFRDKQLIPYIQPIVESHSKCVVGGEVLLRWLHPDFGYISPELFIPYVEKSSAINEITDYIFEYVGNSLKSHSDTLPRKMKFCFNISPKNLNNKNLLRSCAKFLETLDDIEPLIVLEITERDKIPDLGSFELVIKALQNNKVQISLDDFGTGYSNYYYIEIFNPDYLKIDKFFVNGIGEKINSQYIIKSIVSLARDVGCLTIAEGVEYAHQYSYLCHENIDYMQGYLFSQPMMINSFASLIIDRN
SIO_010081: GCU50_RS00330
subclass of: SO_0000673
so part of: GCU50_RS00330
location: complement(62749..63558)
location: region:62749-63558:-1
so has part: feature:62749-63558:-1:exon

WP_167518495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62749-63558:-1:exon

GCU50_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00335
so part of: sequence
location: complement(63705..64223)
location: region:63705-64223:-1
so has part: feature:63705-64223:-1:exon
subclass of: SO_0000010

position:63705:-1
position: 63705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64223:-1
position: 64223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63705-64223:-1:exon

GCU50_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00335
inference: COORDINATES: protein motif:HMM:NF021011.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKKLLSIAMGFITLGMASSASAAFIEQVTQTSTLTFSQPTSALNLVINPVAGLTAGAFQNGAQLANITVTQTASTDLNHIGLRWTPGIANQVVESSRQAVVLGDTSATNQLKAIISFTGVAGSDVASPAGGPYYVTTPTVNTLNAQILTQGNQNIAADTYPISLDAAVYIP
SIO_010081: GCU50_RS00335
subclass of: SO_0000673
so part of: GCU50_RS00335
location: complement(63705..64223)
location: region:63705-64223:-1
so has part: feature:63705-64223:-1:exon

WP_090126947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63705-64223:-1:exon

GCU50_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00340
pseudo: true
so part of: sequence
location: 64778..65884
location: region:64778-65884:1
so has part: feature:64778-65884:1:exon
subclass of: SO_0000010

position:64778:1
position: 64778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65884:1
position: 65884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64778-65884:1:exon

GCU50_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611340.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: GCU50_RS00340
subclass of: SO_0000673
so part of: GCU50_RS00340
location: 64778..65884
location: region:64778-65884:1
so has part: feature:64778-65884:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64778-65884:1:exon

GCU50_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00345
so part of: sequence
location: 66429..66947
location: region:66429-66947:1
so has part: feature:66429-66947:1:exon
subclass of: SO_0000010

position:66429:1
position: 66429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66947:1
position: 66947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66429-66947:1:exon

GCU50_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00345
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKRSKVVLFFMSCLALGMAFSASSTAFNRQITETATISFIQPTGSLRLIIVPKPNLIAGVYEKDYKVADFTLESLKGAVYLAVRWSLTGNQGNFDLNHTLATIYGKNNPENQIHLKFRFQNITGVGSVYPDNWYVINSTQTRAEASIYTSRDHTINADDYVMTLDAAIYTP
SIO_010081: GCU50_RS00345
subclass of: SO_0000673
so part of: GCU50_RS00345
location: 66429..66947
location: region:66429-66947:1
so has part: feature:66429-66947:1:exon

WP_090126945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66429-66947:1:exon

GCU50_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00350
pseudo: true
so part of: sequence
location: complement(67254..68362)
location: region:67254-68362:-1
so has part: feature:67254-68362:-1:exon
subclass of: SO_0000010

position:67254:-1
position: 67254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68362:-1
position: 68362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67254-68362:-1:exon

GCU50_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611760.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: GCU50_RS00350
subclass of: SO_0000673
so part of: GCU50_RS00350
location: complement(67254..68362)
location: region:67254-68362:-1
so has part: feature:67254-68362:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67254-68362:-1:exon

GCU50_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00355
so part of: sequence
location: complement(68587..70908)
location: region:68587-70908:-1
so has part: feature:68587-70908:-1:exon
subclass of: SO_0000010

position:68587:-1
position: 68587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70908:-1
position: 70908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68587-70908:-1:exon

GCU50_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00355
inference: COORDINATES: protein motif:HMM:NF021945.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M66 family metalloprotease
translation: MNSIISPQSKNRAPFLYFNDTVPENDLEGTLAARVQFAQSQIIPSHPKGDDRQPILTNLRDTLILVQPLQPDLTSPMYVQVLNKNGEILKQLVLNQPSRLPVTAYHIPDAPDDGIDFTPLNNSHTFIDTSAELAKLKDPSGLFLKEKLSQYALVEIKTANGLWVSDIYLPDDPSLEGKMVRVKSSAGYKSNLYYAGRKMVVSSGDNLQFKFINNQWFREDELELNAISYAPNTWSVVLPGNLMTHGITLSFFQGNLFGKLTDLKISGPCELLINTIDIGMLVSPRNEFYFSSDKQAQREYFQTTPFSWMIVNQYAPLYLPEVMLPDGSFLTDKDPGTGGWHTGTMCHQISRDLVSKGINSANYGINSSSGTGQPYHFRATQVTMHNSRGNYANGIQVHGGMASTGVVSIDKSYGNEISHELGHSFSLADLNDGFRGCVHRSTGNINSTWGWDSDKNIFIPNFKSIRNNASSCFDNQCQPPFHGYQFGYDAMNGGEPLSSANRYTLYTPNSSAIMQSYVATKALFDPFSPTGFSKWNVESGKMDPYESYVDIDYVNVSITNINESLLADLVNEHNLVNITVRDGQWAREIIMPAANSYNNGHSVTIDQNASWNCTLYINGNSIVMAKGFKKSFTSDGVLWQEEKTIMATQVLRVPERFGIPVTTLVGYYDPNGLLQSYIYPALFGAYGFCYADDEKDSNDVGCKLLVETEKGIKKFILRNSRASSDAMNKFHINIPTDIKPTKAIILRKGKVIAERELQSAPTGLLCTIHGKKI
SIO_010081: GCU50_RS00355
subclass of: SO_0000673
so part of: GCU50_RS00355
location: complement(68587..70908)
location: region:68587-70908:-1
so has part: feature:68587-70908:-1:exon

WP_090126943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68587-70908:-1:exon

GCU50_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00360
so part of: sequence
location: 71306..71626
location: region:71306-71626:1
so has part: feature:71306-71626:1:exon
subclass of: SO_0000010

position:71306:1
position: 71306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71626:1
position: 71626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71306-71626:1:exon

GCU50_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00360
inference: COORDINATES: protein motif:HMM:NF012314.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin family protein
translation: MSIFNATTVSEFREKIQTVGSKLIVVYFITRSSNVLETIEKNIEEVSLIYQDVIFIRVNTDDAKSLAIEYNIRTYPSFVFIKQCNVLCNFIKWDYAELIKIIEHLN
SIO_010081: GCU50_RS00360
subclass of: SO_0000673
so part of: GCU50_RS00360
location: 71306..71626
location: region:71306-71626:1
so has part: feature:71306-71626:1:exon

WP_090126941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71306-71626:1:exon

GCU50_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00365
so part of: sequence
location: complement(72144..73255)
location: region:72144-73255:-1
so has part: feature:72144-73255:-1:exon
subclass of: SO_0000010

position:72144:-1
position: 72144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73255:-1
position: 73255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72144-73255:-1:exon

GCU50_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611839.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MRKARFTEHQIIAVLKSVETGRTVKDVCREAGISEASYYNWKAKYDGMEASDIKKMKDLEDENRQLKQMFADLSLENRALKDVIGKKALTPAIKRELVSYLTTQFAMSIRRACRMLSLSRTVFLYQPDTRRDEPVIVALTVAAERHPRYGFKKLFQVLCRQGNSWNHKRVHRIYCLLKLNFRRKGKQRLPVRNPSPLATPEALNQSWSIDFMHDALVCGRRFRTFNVVDDFNREALVIEIDLNIPAQRVVRVLDRIVANRGYPLKMRMDNGPELISLTLAQWAEEHGVALEFIKPGKPTQNAFIERFNRTYRTEILDFYLFRTLNEAREITERWLTEYNSERPHESLNNLTPEGYRLMAEPPEISKSAWN
SIO_010081: GCU50_RS00365
subclass of: SO_0000673
so part of: GCU50_RS00365
location: complement(join(72144..73003,73003..73255))
location: region:72144-73255:-1
so has part: feature:73003-73255:-1:exon
so has part: feature:72144-73003:-1:exon

WP_090126939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73003-73255:-1:exon

position:73003:-1
position: 73003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:72144-73003:-1:exon

GCU50_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00370
pseudo: true
so part of: sequence
location: complement(<73704..74074)
location: region:73704-74074:-1
so has part: feature:73704-74074:-1:exon
subclass of: SO_0000010

position:73704:-1
position: 73704
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:74074:-1
position: 74074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73704-74074:-1:exon

GCU50_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611920.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: GCU50_RS00370
subclass of: SO_0000673
so part of: GCU50_RS00370
location: complement(<73704..74074)
location: region:73704-74074:-1
so has part: feature:73704-74074:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:73704-74074:-1:exon

GCU50_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00375
so part of: sequence
location: 75385..75885
location: region:75385-75885:1
so has part: feature:75385-75885:1:exon
subclass of: SO_0000010

position:75385:1
position: 75385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75885:1
position: 75885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75385-75885:1:exon

GCU50_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00375
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKGFTSISLIYIRNCLFLFIFLPVSEAYSCIDLNFIKCVEANQSKSRGCYDFASKGKSEISFHTKIKISSTQYIIGDRIIVQITLMDSHGNPVKGMSDLLMKKNIVTIPGTVTYNISKWSEYNDGIYFTDRVAEKIGENYRVTIHLCNKVFKSGTYSITPFPESFN
SIO_010081: GCU50_RS00375
subclass of: SO_0000673
so part of: GCU50_RS00375
location: 75385..75885
location: region:75385-75885:1
so has part: feature:75385-75885:1:exon

WP_139234461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75385-75885:1:exon

GCU50_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00380
so part of: sequence
location: complement(75918..76256)
location: region:75918-76256:-1
so has part: feature:75918-76256:-1:exon
subclass of: SO_0000010

position:75918:-1
position: 75918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76256:-1
position: 76256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75918-76256:-1:exon

GCU50_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKESGLGRDFVCGGEVYTSVTTKTTHQIVRSKESIMEEIIFISKGFLIGRPMKILNGKILISLENKTNVILDTLRPVKINVVDRSKLFFIDYNLAIREEKLSMILHKIERLD
SIO_010081: GCU50_RS00380
subclass of: SO_0000673
so part of: GCU50_RS00380
location: complement(75918..76256)
location: region:75918-76256:-1
so has part: feature:75918-76256:-1:exon

WP_090126932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75918-76256:-1:exon

GCU50_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00385
so part of: sequence
location: complement(76901..78610)
location: region:76901-78610:-1
so has part: feature:76901-78610:-1:exon
subclass of: SO_0000010

position:76901:-1
position: 76901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78610:-1
position: 78610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76901-78610:-1:exon

GCU50_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004876040.1
GO function: GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxal-dependent decarboxylase
translation: MKINANKLRRHIVRKFCHTSGDSERLQALMEYTQHLNDYILSEGKKWQANLPELQFLSGTRTDLGPKFPARYYSYLDELDKGEDYEPVDDKEILQEVARFFRGSLRSGSPNALFNMLPEASIEATAAAWLVTTYNPNMLMDFFGGEALLIEQQVCRYIGKWAGWPQSMGIACNGGKFTLLYAIRLAISRMEPESAKTGLPRDLVILCSEGAHYCVEHAASLLGLGADNCLRVAGTKDGVMDPNELQRVLDEQHLNGRRIAAVICSGGTTINFNCEDTCKILQSINDFSIRHSLRQRPYLHLDSVIGWIYLSTLNMDSESIFAHFSEPETRKRIAEVQRRLEGISGFDSMGVDFHKNGLCPYASSFFIASDRRFMDELGDGNYKYCDKDFHYGQFRTYRYTFENSRPGQGILAAWVNLRRLGRRGYADYLALLHRARNSVSDALARHSFFRVLNESSLGWEVVFAILFAPDIISLSQSHEELAMSFMQECWERVNAGYNLPLFSIVPGYRINNDPENIITAFLVYPMRQYSDEEWDDIVKLIAAQVNDFQDRLRSQQLSIERIQIDRPVR
SIO_010081: GCU50_RS00385
subclass of: SO_0000673
so part of: GCU50_RS00385
location: complement(76901..78610)
location: region:76901-78610:-1
so has part: feature:76901-78610:-1:exon

WP_090126930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76901-78610:-1:exon

GCU50_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 551989
locus tag: GCU50_RS00390
pseudo: true
so part of: sequence
location: complement(78862..>79224)
location: region:78862-79224:-1
so has part: feature:78862-79224:-1:exon
subclass of: SO_0000010

position:78862:-1
position: 78862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79224:-1
position: 79224
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78862-79224:-1:exon

GCU50_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 551989
locus tag: GCU50_RS00390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase core domain-containing protein
SIO_010081: GCU50_RS00390
subclass of: SO_0000673
so part of: GCU50_RS00390
location: complement(78862..>79224)
location: region:78862-79224:-1
so has part: feature:78862-79224:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78862-79224:-1:exon