Natrialba magadii ATCC 43099 plasmid pNMAG01, complete sequence.
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.
A comparative genomics perspective on the genetic content of the alkaliphilic haloarchaeon Natrialba magadii ATCC 43099T
Complete sequence of plasmid1 of Natrialba magadii ATCC 43099
Submitted (15-SEP-2016) Computational Biology Group, Max-Planck Institute of Biochemistry, Am Klopferspitz 18, Martinsreid D-82152, Germany
Submitted (12-FEB-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP001933.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4083620\nSource DNA and organism available from Julie A. Maupin-Furlow\n(jmaupin@ufl.edu)\nContacts: Julie A. Maupin-Furlow (jmaupin@ufl.edu)\n Tanja Woyke (microbe@cuba.jgi-psf.org)\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. it is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Metadata-START##\nOrganism Display Name :: Natrialba magadii ATCC 43099\nCulture Collection ID :: ATCC 43099, DSM 3394, NCIMB 2190\nGOLD Stamp ID :: Gi02060\nIsolation Site :: Lake Magadi in Kenya\nSource of Isolate :: ATCC 43099\nLatitude :: \"-189,635\"\nLongitude :: \"36,273,931\"\nOxygen Requirement :: Aerobe\nCell Shape :: Rod-shaped\nMotility :: Motile\nSporulation :: Nonsporulating\nTemperature Range :: Mesophile\nSalinity :: Halophile\nGram Staining :: gram-\nBiotic Relationship :: Free living\nDiseases :: None\nHabitat :: Fresh water\nPhenotypes :: Alkaliphile\n##Metadata-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/05/2023 18:51:24\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,252\nCDSs (total) :: 4,189\nGenes (coding) :: 4,111\nCDSs (with protein) :: 4,111\nGenes (RNA) :: 63\nrRNAs :: 5, 3, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 3, 4 (5S, 16S, 23S)\ntRNAs :: 49\nncRNAs :: 2\nPseudo Genes (total) :: 78\nCDSs (without protein) :: 78\nPseudo Genes (ambiguous residues) :: 0 of 78\nPseudo Genes (frameshifted) :: 33 of 78\nPseudo Genes (incomplete) :: 56 of 78\nPseudo Genes (internal stop) :: 28 of 78\nPseudo Genes (multiple problems) :: 29 of 78\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_006652796.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
orc1/cdc6 family replication initiation protein
COORDINATES: similar to AA sequence:RefSeq:WP_006107062.1
COORDINATES: similar to AA sequence:RefSeq:WP_006652798.1
COORDINATES: similar to AA sequence:RefSeq:WP_006666781.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266924.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266925.1
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006167181.1
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004266927.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266928.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266929.1
COORDINATES: similar to AA sequence:RefSeq:WP_006652806.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_007107592.1
COORDINATES: protein motif:HMM:NF025027.2
COORDINATES: similar to AA sequence:RefSeq:WP_004266934.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266935.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266936.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266937.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006652827.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006168745.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266941.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004266942.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266943.1
GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_008160679.1
vitamin K epoxide reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006168730.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004266946.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006652848.1
COORDINATES: similar to AA sequence:RefSeq:WP_004213459.1
COORDINATES: similar to AA sequence:RefSeq:WP_004213461.1
COORDINATES: similar to AA sequence:RefSeq:WP_004213463.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004213464.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006652867.1
COORDINATES: similar to AA sequence:RefSeq:WP_004213470.1
COORDINATES: similar to AA sequence:RefSeq:WP_004213471.1
COORDINATES: similar to AA sequence:RefSeq:WP_004213473.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004213474.1
GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0009002 - serine-type D-Ala-D-Ala carboxypeptidase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
COORDINATES: similar to AA sequence:RefSeq:WP_004213476.1
COORDINATES: similar to AA sequence:RefSeq:WP_006652872.1
COORDINATES: similar to AA sequence:RefSeq:WP_004213479.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004213480.1
COORDINATES: similar to AA sequence:RefSeq:WP_004213482.1
COORDINATES: similar to AA sequence:RefSeq:WP_004213483.1
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004213484.1
COORDINATES: similar to AA sequence:RefSeq:WP_006652880.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266948.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825315.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266950.1
COORDINATES: similar to AA sequence:RefSeq:WP_015320494.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266953.1
GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004266954.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266955.1
GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006652929.1
COORDINATES: similar to AA sequence:RefSeq:WP_008367584.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004266958.1
COORDINATES: similar to AA sequence:RefSeq:WP_006628086.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981503.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266961.1
COORDINATES: similar to AA sequence:RefSeq:WP_008422760.1
COORDINATES: similar to AA sequence:RefSeq:WP_007258669.1
COORDINATES: similar to AA sequence:RefSeq:WP_006168697.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266965.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266967.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006168694.1
COORDINATES: similar to AA sequence:RefSeq:WP_006168693.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266972.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266973.1
COORDINATES: similar to AA sequence:RefSeq:WP_008418114.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006652897.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266975.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266976.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945379.1
COORDINATES: similar to AA sequence:RefSeq:WP_006111093.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266979.1
COORDINATES: similar to AA sequence:RefSeq:WP_005576251.1
COORDINATES: similar to AA sequence:RefSeq:WP_005576249.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266982.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004266983.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266984.1
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004266985.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266986.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266987.1
COORDINATES: similar to AA sequence:RefSeq:WP_006087847.1
COORDINATES: similar to AA sequence:RefSeq:WP_007261179.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266990.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266991.1
COORDINATES: similar to AA sequence:RefSeq:WP_006431741.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266993.1
COORDINATES: similar to AA sequence:RefSeq:WP_006652842.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266995.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266996.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007261633.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004266998.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_004266999.1
COORDINATES: similar to AA sequence:RefSeq:WP_004267000.1
COORDINATES: similar to AA sequence:RefSeq:WP_004267001.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966619.1
COORDINATES: similar to AA sequence:RefSeq:WP_004267003.1
COORDINATES: similar to AA sequence:RefSeq:WP_004267004.1
COORDINATES: similar to AA sequence:RefSeq:WP_004267005.1
COORDINATES: similar to AA sequence:RefSeq:WP_004267006.1
COORDINATES: similar to AA sequence:RefSeq:WP_004267007.1
COORDINATES: similar to AA sequence:RefSeq:WP_006167144.1
COORDINATES: similar to AA sequence:RefSeq:WP_004267009.1
COORDINATES: similar to AA sequence:RefSeq:WP_004267010.1
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004267011.1
COORDINATES: similar to AA sequence:RefSeq:WP_004267012.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006107026.1
COORDINATES: similar to AA sequence:RefSeq:WP_004267014.1
COORDINATES: nucleotide motif:Rfam:14.4:RF02540
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_004214207.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214208.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214210.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214211.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004214212.1
COORDINATES: similar to AA sequence:RefSeq:WP_006167132.1
COORDINATES: similar to AA sequence:RefSeq:WP_007259914.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214215.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653129.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214217.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004214218.1
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_004214220.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_006653125.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004214222.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214223.1
COORDINATES: similar to AA sequence:RefSeq:WP_005554386.1
b(o/a)3-type cytochrome-c oxidase subunit 1
COORDINATES: similar to AA sequence:RefSeq:WP_004214225.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214226.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214227.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214228.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667574.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653113.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653112.1
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012996893.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214233.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004214234.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653108.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004214246.1
COORDINATES: similar to AA sequence:RefSeq:WP_006165808.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006088728.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214250.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: similar to AA sequence:RefSeq:WP_004214251.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214253.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214254.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653079.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214257.1
COORDINATES: similar to AA sequence:RefSeq:WP_015298748.1
COORDINATES: similar to AA sequence:RefSeq:WP_006165815.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214261.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214262.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214263.1
GO:0019239 - deaminase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012944064.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214271.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006653068.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004214273.1
COORDINATES: similar to AA sequence:RefSeq:WP_006165849.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214275.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214276.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004214277.1
COORDINATES: similar to AA sequence:RefSeq:WP_006167014.1
COORDINATES: similar to AA sequence:RefSeq:WP_015322475.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004214280.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_004214282.1
COORDINATES: similar to AA sequence:RefSeq:WP_008164371.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214287.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214288.1
COORDINATES: similar to AA sequence:RefSeq:WP_006089357.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214290.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214291.1
COORDINATES: similar to AA sequence:RefSeq:WP_005554384.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214294.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214295.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214296.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214298.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214300.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004214301.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214303.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653155.1
RNA-guided endonuclease TnpB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004214304.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214306.1
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004214307.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214309.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214310.1
GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004214311.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214312.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006088415.1
COORDINATES: protein motif:HMM:NF012861.2
COORDINATES: similar to AA sequence:RefSeq:WP_004214317.1
COORDINATES: similar to AA sequence:RefSeq:WP_006088031.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214320.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214321.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214322.1
COORDINATES: similar to AA sequence:RefSeq:WP_006065803.1
ADP-dependent glucokinase/phosphofructokinase
COORDINATES: similar to AA sequence:RefSeq:WP_004214324.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214326.1
GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004214327.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214328.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214329.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214330.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214332.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004214333.1
GO:0050415 - formimidoylglutamase activity [Evidence IEA]
GO:0019556 - histidine catabolic process to glutamate and formamide [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006165957.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004214337.1
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006653048.1
COORDINATES: similar to AA sequence:RefSeq:WP_008319919.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214348.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214349.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214350.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214351.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214352.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653041.1
COORDINATES: similar to AA sequence:RefSeq:WP_006165996.1
COORDINATES: similar to AA sequence:RefSeq:WP_006165997.1
COORDINATES: similar to AA sequence:RefSeq:WP_006165999.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214362.1
COORDINATES: similar to AA sequence:RefSeq:WP_006166002.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214364.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653034.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653033.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214367.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214368.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214369.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214370.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214371.1
COORDINATES: similar to AA sequence:RefSeq:WP_006166017.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653025.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653024.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214375.1
COORDINATES: similar to AA sequence:RefSeq:WP_008415368.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214381.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653019.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214383.1
aldehyde ferredoxin oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004214384.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653016.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214386.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653015.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214389.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214391.1
COORDINATES: similar to AA sequence:RefSeq:WP_006166031.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968413.1
carbon-nitrogen hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006653010.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653009.1
COORDINATES: similar to AA sequence:RefSeq:WP_011323814.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214402.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004214408.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214409.1
COORDINATES: similar to AA sequence:RefSeq:WP_006166039.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653003.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214414.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214416.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004214417.1
COORDINATES: similar to AA sequence:RefSeq:WP_005552937.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214420.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214422.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214423.1
COORDINATES: similar to AA sequence:RefSeq:WP_006652995.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_005044565.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_004214428.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214430.1
COORDINATES: similar to AA sequence:RefSeq:WP_006652992.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008894208.1
COORDINATES: similar to AA sequence:RefSeq:WP_006166055.1
COORDINATES: similar to AA sequence:RefSeq:WP_006090338.1
COORDINATES: similar to AA sequence:RefSeq:WP_012943845.1
phytoene/squalene synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006166059.1
bacterio-opsin activator domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006652985.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004214440.1
COORDINATES: similar to AA sequence:RefSeq:WP_008426614.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214442.1
GO:0003885 - D-arabinono-1,4-lactone oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004214443.1
COORDINATES: similar to AA sequence:RefSeq:WP_015322871.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825685.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214451.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214452.1
COORDINATES: similar to AA sequence:RefSeq:WP_006652962.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004214456.1
COORDINATES: similar to AA sequence:RefSeq:WP_015320564.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214459.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214460.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004214461.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214463.1
3-oxoadipate--succinyl-CoA transferase subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_006091229.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214465.1
COORDINATES: similar to AA sequence:RefSeq:WP_006652955.1
COORDINATES: similar to AA sequence:RefSeq:WP_006652954.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214469.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825465.1
COORDINATES: similar to AA sequence:RefSeq:WP_006652951.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214472.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214473.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214474.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214475.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214476.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214477.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214478.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004214479.1
COORDINATES: similar to AA sequence:RefSeq:WP_006652942.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214481.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214482.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214483.1
COORDINATES: similar to AA sequence:RefSeq:WP_006652938.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214486.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214487.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006652935.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214489.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214490.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214491.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214492.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214493.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214495.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214497.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214499.1
hydantoinase B/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006666794.1
hydantoinase/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012996939.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:14.4:RF01959
COORDINATES: protein motif:HMM:NF025001.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006652795.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.