Filifactor alocis ATCC 35896, complete sequence.
type: Entry
definition: Filifactor alocis ATCC 35896, complete sequence.
sequence version: NC_016630.1
sequence date: 2023-04-12
sequence: sequence
division: CON
label: NC_016630.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02463683
keyword: RefSeq
source: Filifactor alocis ATCC 35896
organism: Filifactor alocis ATCC 35896
taxonomy: Bacteria; Bacillota; Clostridia; Eubacteriales; Peptostreptococcaceae; Filifactor.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP002390.1.\nThis is a reference genome for the Human Microbiome Project. This\nproject is co-owned with the Human Microbiome Project DACC.\nSource DNA provided by Jacques Izard, Jessica M. Blanton, Oxana V.\nBaranova, Anne C. Tanner and Floyd E. Dewhirst (Molecular Genetics,\nThe Forsyth Institute, Boston, MA 02115, USA).\nBacteria provided by Jacques Izard, Jessica M. Blanton, Oxana V.\nBaranova, Anne C. Tanner and Floyd E. Dewhirst (Molecular Genetics,\nThe Forsyth Institute, Boston, MA 02115, USA).\nGene Calling Method: GeneMark; Glimmer; Metagene; PFAM; Blast to\nnon-redundant protein database; Manual curation.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nFinishing Goal :: Finished\nCurrent Finishing Status :: Finished\nAssembly Method :: Newbler v. 2.1-PreRelease-4/28/2009\nGenome Coverage :: 47.32x\nSequencing Technology :: 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/12/2023 00:37:18\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,731\nCDSs (total) :: 1,668\nGenes (coding) :: 1,645\nCDSs (with protein) :: 1,645\nGenes (RNA) :: 63\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 4\nPseudo Genes (total) :: 23\nCDSs (without protein) :: 23\nPseudo Genes (ambiguous residues) :: 0 of 23\nPseudo Genes (frameshifted) :: 11 of 23\nPseudo Genes (incomplete) :: 14 of 23\nPseudo Genes (internal stop) :: 5 of 23\nPseudo Genes (multiple problems) :: 5 of 23\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END…

sequence
subclass of: SO_0000340
sequence length: 1931012
topology: circular
so has quality: SO_0000988
location: 1..1931012
location: region:1-1931012:1
RO_0002162: 546269

NC_016630
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02463683
type: BioSample
SIO_000068: biosample

1
title: The Genome Sequence of Filifactor alocis strain ATCC 35896
author: Ward, D.
author: Earl, A.
author: Feldgarden, M.
author: Young, S.K.
author: Gargeya, S.
author: Zeng, Q.
author: Alvarado, L.
author: Berlin, A.
author: Bochicchio, J.
author: Chapman, S.B.
author: Chen, Z.
author: Freedman, E.
author: Gellesch, M.
author: Goldberg, J.
author: Griggs, A.
author: Gujja, S.
author: Heilman, E.
author: Heiman, D.
author: Howarth, C.
author: Mehta, T.
author: Neiman, D.
author: Pearson, M.
author: Roberts, A.
author: Saif, S.
author: Shea, T.
author: Shenoy, N.
author: Sisk, P.
author: Stolte, C.
author: Sykes, S.
author: White, J.
author: Yandava, C.
author: Izard, J.
author: Blanton, J.M.
author: Baranova, O.V.
author: Tanner, A.C.
author: Dewhirst, F.E.
author: Haas, B.
author: Nusbaum, C.
author: Birren, B.
journal: Unpublished

2
title: Direct Submission
author: Ward, D.
author: Earl, A.
author: Feldgarden, M.
author: Young, S.K.
author: Gargeya, S.
author: Zeng, Q.
author: Alvarado, L.
author: Berlin, A.
author: Bochicchio, J.
author: Chapman, S.B.
author: Chen, Z.
author: Freedman, E.
author: Gellesch, M.
author: Goldberg, J.
author: Griggs, A.
author: Gujja, S.
author: Heilman, E.
author: Heiman, D.
author: Howarth, C.
author: Mehta, T.
author: Neiman, D.
author: Pearson, M.
author: Roberts, A.
author: Saif, S.
author: Shea, T.
author: Shenoy, N.
author: Sisk, P.
author: Stolte, C.
author: Sykes, S.
author: White, J.
author: Yandava, C.
author: Izard, J.
author: Blanton, J.M.
author: Baranova, O.V.
author: Tanner, A.C.
author: Dewhirst, F.E.
author: Haas, B.
author: Nusbaum, C.
author: Birren, B.
journal: Submitted (14-DEC-2010) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1931012:1
position: 1931012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1931012:1:source
so part of: sequence
organism: Filifactor alocis ATCC 35896
mol type: genomic DNA
strain: ATCC 35896
culture collection: ATCC:35896
type material: type strain of Filifactor alocis
note: type strain of Filifactor alocis

546269
type: Taxonomy
SIO_000068: taxonomy

HMPREF0389_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: dnaA
locus tag: HMPREF0389_RS00005
old locus tag: HMPREF0389_01196
so part of: sequence
location: 88..1419
location: region:88-1419:1
so has part: feature:88-1419:1:exon
subclass of: SO_0000010

position:88:1
position: 88
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419:1
position: 1419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88-1419:1:exon

HMPREF0389_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: dnaA
locus tag: HMPREF0389_RS00005
old locus tag: HMPREF0389_01196
inference: COORDINATES: protein motif:HMM:TIGR00362.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosomal replication initiator protein DnaA
translation: MNAQELWEAVKQEFAATVSAKTTNIYKTFIDRLEPIMIKNDKLVLFATNQIILEMIEREYLDILNGILEKKSNSSLSIQLILSLDDLNSEPKEEKKDIYQKNITLIPKYTFDSFVVGNNNVLAHSACVAVANDPAHSYNPLFIYGGVGLGKTHLMHAIGNHVLSQNKDVKILYLSSETFTNELINSIKDDTNEEFRNKYRKDVDILLIDDIQFISEKERTQEEFFHTFNTLHGADKQIIISSDRAPKEIPMLADRLRSRFEMGLIVDIQPPDYETRIAILRKKAQEEKHHVPDLVFEYIAKNIKSNIRELEGALTRIFAYSDLTKREITPELSQEALKNIFQSKQHVEITPTFIKEKVAESFSIQVDDFSSKGRKREIAYPRQIAMYLCRELTGLSLPKIGTEFGGRDHTTVMHACDKITSDIKIDEKTKELIENLKKDIQNA
SIO_010081: HMPREF0389_RS00005
subclass of: SO_0000673
so part of: HMPREF0389_RS00005
location: 88..1419
location: region:88-1419:1
so has part: feature:88-1419:1:exon

WP_014261683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88-1419:1:exon

HMPREF0389_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: dnaN
locus tag: HMPREF0389_RS00010
old locus tag: HMPREF0389_01195
so part of: sequence
location: 1831..2919
location: region:1831-2919:1
so has part: feature:1831-2919:1:exon
subclass of: SO_0000010

position:1831:1
position: 1831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2919:1
position: 2919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1831-2919:1:exon

HMPREF0389_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: dnaN
locus tag: HMPREF0389_RS00010
old locus tag: HMPREF0389_01195
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:TIGR00663.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MKFTVNQREFSDALAIASKAIISKTPLDILKGFYLEAYENELTITGNNLEIGIRTSIDAAVETEGKSVIDAKILSDIIRKLPNEEVTVSIKDGNVLLQCQKLKFTIKEMLDNGFPTVDELEEAVYQNIHPAILEEMIKKTHFAVTTDETKPVFMGELVELEDNQMNVIALDGFRLAYKKCELKSSVGSRSMIIPGKTMVEIMRLCQTMEEDVKIGIEDRHASFLFGRTLVNTQLIQGEFSKYEEIIPKEFSTKIKVNRQKFIDALDRATLVSKNYLVKLRIQNDELLITAHDNEVGNLEEILDVELEGKNLEIAFNIRFFLDSLKVMEDEYIYMNFNTNVSPCIIKPEFETDYTYLVLPVRI
SIO_010081: HMPREF0389_RS00010
subclass of: SO_0000673
so part of: HMPREF0389_RS00010
location: 1831..2919
location: region:1831-2919:1
so has part: feature:1831-2919:1:exon

WP_041250718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1831-2919:1:exon

HMPREF0389_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00015
old locus tag: HMPREF0389_01194
so part of: sequence
location: 3082..3993
location: region:3082-3993:1
so has part: feature:3082-3993:1:exon
subclass of: SO_0000010

position:3082:1
position: 3082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3993:1
position: 3993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3082-3993:1:exon

HMPREF0389_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00015
old locus tag: HMPREF0389_01194
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009525492.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-2-hydroxyacid dehydrogenase
translation: MKCLITELVHPSGVDILKQHYDVTLAYGKSLDEVKAMVKDYEILIVRSDTPVQKDMIDAGVKLKAIGMAGIGLNHIDTKYAEEKGIKVFNVKDGSIDSVAELALTLMLTVMRKVNPANNAVKQGKWDKMGFTGNLLTEKTVGILAVGRIGSRVAQLCQGFGCNVIGYDPYLPQEVADKIGVKLMSLDEVLKTADILSIHMPLTPETKHMIGKKQLDMMKEGSFLFNLGRGGLVDEDALYDALKSGHLAGAGLDVVEVEPPAPDHKLFELDNCIITCHIGAGSYEAQEKIAKSLANQIIEYLSK
SIO_010081: HMPREF0389_RS00015
subclass of: SO_0000673
so part of: HMPREF0389_RS00015
location: 3082..3993
location: region:3082-3993:1
so has part: feature:3082-3993:1:exon

WP_014261685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3082-3993:1:exon

HMPREF0389_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00020
old locus tag: HMPREF0389_01193
so part of: sequence
location: 4376..8584
location: region:4376-8584:1
so has part: feature:4376-8584:1:exon
subclass of: SO_0000010

position:4376:1
position: 4376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8584:1
position: 8584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4376-8584:1:exon

HMPREF0389_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00020
old locus tag: HMPREF0389_01193
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019190530.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-CoA dehydratase activase-related protein
translation: MLFHLGLDVGSTTVKLVLMDDTGEVLYEVYRRHKSDVVETVKNILKEVYDKFGNLDITIAVTGSGGMFVEKYFGIHFVQEVIAGTKAIREYIPETDVAIELGGEDSKITYLSGNIEQRMNSICAGGTGAFIDQMASLMELDAGTLNERAKNYHKIYPIASRCGVFAKTDIQALMNQGASKEDISASVFQSVVNQTISNLACGRPIKGNIALLGGPLHFLSELRVRFEETIGQDKNTFIVPDNSQLYVALGACLASKFCEKTTFFELMKKINGEILLEIDESQTLDPLFTSQEEIDSFRDSHKDVKVQKNSIETYRGPCYLGIDAGSTTSKLVLLDDDSKILYSHYSNNNGNPLEIAIEVLKDIYDKLPEGAWIASSGITGYGEDFLRAAIGIDVGEVETIAHYTAAKYFEPDVDFILDIGGQDMKAMHITDGIIDSIQLNEACSSGCGSFIETFAKSLGMTVEDFQNAALRAERPVDLGSRCTVFMNSKVKQAQKEGASSKDIAAGLCYSVIKNALQKVIKLRDPSKLGNKVVVQGGTFYGDGILRAFEKISGKKAIRPSISGLMGAFGMALIAKKRQNETSTLFTLEQLKHFSYKQKNARCGLCPNNCALTINIFSDGSRYVTGNRCERGAGVKKQTKTLPNLYDYKYKRVFDYEPLPIELAPMGRVGLPRVLNMYENYPFWFRFFTDLGFSVVLSEDTTRKTYEKGIASITSETCCYPAKIVHGHIESLVEQGVDLIFYPSVFYEKKEYEKSQNHLNCPVVAGYPEVIKNNVDSIEEKGIEYLNPFLSFDSRKGMTKRLFEVFGKKGISKERIKTAVSSAYEELERYREDVAKEGRRALEYIEENNTKAIVLAGRPYHIDPEINHGIPGLITSLGYAVISEDSLVKNYDISQELRVLDQWVYHSRLYRAAEFVGKRKDLEMVQLNSFGCGLDAVTTDQVNEILNANGKIYTVIKIDEVSNLGAIKIRLRSLMQALEDRKFVPKEEYLLDNCHVPFTKEMKRDYTILCPQMAKDHFEILEGALKSEGYQIEFLPNVNSQVIEEGLKYVNNDACYPSIIVVGQMMDAISSGKYNVNKLALLMTQTGGACRASNYVGFIRRALKDRGLEQIPVIAISAQGIEKNPGFKISLDLLKKGLGGILLGDLLMRLRNAVKPYEKKEGETDRLKSYYIEKSKKFITNPDIIHYKKLVNEIVDAFEKIEVYDKKLIKVGIVGEILVKYLPEANNNLQDILEEEGCEVVMPDLTDFLMYCLRNSVHKGEFFSKSKMSAMYGQLGVDLIEHLRKPIRKRLKESRFHEPEYIENLEKMAKPIVSLGNQYGEGWLLTSEMIELIQQGVSSIVCIQPFGCLPNHITGKGVIKRIRKDYPNVTITPIDYDPGASEVNQINRIKLMLSSVKENCMDE
SIO_010081: HMPREF0389_RS00020
subclass of: SO_0000673
so part of: HMPREF0389_RS00020
location: 4376..8584
location: region:4376-8584:1
so has part: feature:4376-8584:1:exon

WP_014261686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4376-8584:1:exon

HMPREF0389_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00025
old locus tag: HMPREF0389_01192
so part of: sequence
location: 8940..9908
location: region:8940-9908:1
so has part: feature:8940-9908:1:exon
subclass of: SO_0000010

position:8940:1
position: 8940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9908:1
position: 9908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8940-9908:1:exon

HMPREF0389_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00025
old locus tag: HMPREF0389_01192
inference: COORDINATES: protein motif:HMM:NF019450.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper amine oxidase N-terminal domain-containing protein
translation: MRNYKRIFVMFGMTVLLFSGVCNASSVEYRLMVDGKQIKTDVEPQLIRNSTYVPVRFFGNGVGASVQFNKPNITIHKGDTTVTCAIGSSVYTRNGEKFSTKEKPYLFQNRVFVPLRIVGELLHCEVNSSVKYSMTDEDKTIHHLELRQTTGKDVTVTAKNLEKEIKVSPDGNWGILTDKIEDTKNNNVYAFYIKNMKTQEIKQVYSSNVFATEDAEWMKDNTVLFGGIDNTNEDYARVLMMYNPKKDKIQELFPASRYRYSMKKHKIIYTHQTENERMRLELGTPYLYDVATKKKTKITPEQYEKWDEEYWQEKSVASNSKK
SIO_010081: HMPREF0389_RS00025
subclass of: SO_0000673
so part of: HMPREF0389_RS00025
location: 8940..9908
location: region:8940-9908:1
so has part: feature:8940-9908:1:exon

WP_014261687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8940-9908:1:exon

HMPREF0389_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00030
old locus tag: HMPREF0389_01191
so part of: sequence
location: 10273..10980
location: region:10273-10980:1
so has part: feature:10273-10980:1:exon
subclass of: SO_0000010

position:10273:1
position: 10273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10980:1
position: 10980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10273-10980:1:exon

HMPREF0389_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00030
old locus tag: HMPREF0389_01191
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007594847.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MKNVLISANNIYKTYSLDSIEVHALSNVSFEIYDGEFLVILGPSGSGKSTMLNIIGGMDTLTKGTLFFEDTAIHDANEKYLTVYRRENIGFVFQFYNLMSNLTALENVELSAEIAKNPFSAKEMLRSVGLEDRLYHFPMQLSGGEQQRVALARALCKNPKLLLCDEPTGALDSKTSVEILKVLKSFHTDYGKTVIIITHNAAIADMADRVFFIKDGTITHIQENPSPIPVEQLVF
SIO_010081: HMPREF0389_RS00030
subclass of: SO_0000673
so part of: HMPREF0389_RS00030
location: 10273..10980
location: region:10273-10980:1
so has part: feature:10273-10980:1:exon

WP_041250719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10273-10980:1:exon

HMPREF0389_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00035
old locus tag: HMPREF0389_01190
so part of: sequence
location: 11012..13369
location: region:11012-13369:1
so has part: feature:11012-13369:1:exon
subclass of: SO_0000010

position:11012:1
position: 11012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13369:1
position: 13369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11012-13369:1:exon

HMPREF0389_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00035
old locus tag: HMPREF0389_01190
inference: COORDINATES: protein motif:HMM:NF024116.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FtsX-like permease family protein
translation: MILYKKLKRDLIGKKESNFAVIVLIAIGITVFSAFDMLGANLVDAQQSFYRSCNFADGFIDIQSIPYQKIKSLKQIEGIFQIEGHIAETFRMNFSRSRDDIYIRLMSYDDSVNQVNQFLLQDGTYPKTGKNEILLDSNFAEYNHLSVGDTIYVVYNGTENPFTVSGTGASPEFIYALKDVRDIVPDYSTYGIGITSLRTMEKMTSLNQSYNNIVFTLKEGYEFTDVSEVLKSLLKHYSVSSIISREHQTSHTVVDDEIKECNTTSRILPSLFLLISSMIQIMMLERLVQSQRTQIGIMKAFGYSERQIQFHYIMFAVILGIVGSVLGILLSVPILYSFVDMYGNFFNFPYISKALSMQVFGISLLTGTLFSVFAGYLGAKKILSLSPLDAFKAEEPHYVQKKTFLDSFTFLFHTFGKMSLRNISRNRKRSFFILIGITLSFALTSVMFMMYSLWNTVITDKYSYNEIYTGKMEFQRVVNKSDAMLELKKRQEVSEIESLLEVPVSFQYKNHIKEVNIIGVEQHSDLYHIVDVHNHEVPIQNEEVFLSHKLAEVLQVQVGDMVYVESSFMKKRKKVPVQVTKIIPQSVGVNAYMSQNTLEKLLNQKNIATSLIFHASQESVEQLRKDYDESNIVSNVVHTGVRKQKMLDFMAHFQFMMYTFSSLGVIMCFIVIYNSYIISIAERNRELSSLLVLGMSRKEVAQIIALEQQIIAFFGVLFGLPLTKVLLKYVSVALSDDNFSIPTTIIPSKFAISLLCIVVSMVLAQYSGRKKINELVIVEVLKERE
SIO_010081: HMPREF0389_RS00035
subclass of: SO_0000673
so part of: HMPREF0389_RS00035
location: 11012..13369
location: region:11012-13369:1
so has part: feature:11012-13369:1:exon

WP_014261689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11012-13369:1:exon

HMPREF0389_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00040
old locus tag: HMPREF0389_01189
so part of: sequence
location: 13592..14851
location: region:13592-14851:1
so has part: feature:13592-14851:1:exon
subclass of: SO_0000010

position:13592:1
position: 13592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14851:1
position: 14851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13592-14851:1:exon

HMPREF0389_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00040
old locus tag: HMPREF0389_01189
inference: COORDINATES: protein motif:HMM:NF024829.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HlyD family efflux transporter periplasmic adaptor subunit
translation: MKKKYKLIVTSIILVVILGISVIHLTDKLTVNTEQVEKTDFQDTIEENGSVVSADKVTLSAELNGVVLSVVKENTPVTQGQAILTIDSSQIEHQIAQLRGNLQSIQGQKEMSMPSVYQSQIEAQKLEIESTKVAMQDLEKNIQDAKLLYEAGSISKSELDNLELSYKQLQIKKNAQEKQLNLIYEQSKPKAGTDKMYDGQQKSVSENMKLLENQKQKAVLRSPINGVVSEILVKSGELAQLQSPVVTIINKDRLQIESYVLTDDVIYLHVGDKVNIRQETNSEDLSGTGVISEISAYATEQRSGLGLDEKKVKVTVSIQDKGTLNISANYDVLLDFVLKEMHDVITIPKSAMFHSKDGKDAVFVVKNGKAVIQEVSIAYESNSKYVIEEGLEEGDEVIKDPNIEGLKENIAVKSEKKKN
SIO_010081: HMPREF0389_RS00040
subclass of: SO_0000673
so part of: HMPREF0389_RS00040
location: 13592..14851
location: region:13592-14851:1
so has part: feature:13592-14851:1:exon

WP_014261690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13592-14851:1:exon

HMPREF0389_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00045
old locus tag: HMPREF0389_01188
so part of: sequence
location: 15400..16053
location: region:15400-16053:1
so has part: feature:15400-16053:1:exon
subclass of: SO_0000010

position:15400:1
position: 15400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16053:1
position: 16053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15400-16053:1:exon

HMPREF0389_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00045
old locus tag: HMPREF0389_01188
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTTWKRKSLSAVLIVTLLFSFISPHQVLATDITTSMTTMYNGERVEITAIDSQTISIKSNSENGTIKILNDNYATREISINSSKEGSFKLIYDKINGTIYSTKTGKTIAVPYSSPYVGQRKTVRISYKEIKDEVENAGSAIAIAAVIALYFSGGTVELLQTIATLLGGIIGINHFVAEGDPNHGIKITCIYKEWKVTKGGQKYTLRDWKVEKFGTY
SIO_010081: HMPREF0389_RS00045
subclass of: SO_0000673
so part of: HMPREF0389_RS00045
location: 15400..16053
location: region:15400-16053:1
so has part: feature:15400-16053:1:exon

WP_014261691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15400-16053:1:exon

HMPREF0389_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: yaaA
locus tag: HMPREF0389_RS00055
old locus tag: HMPREF0389_01186
so part of: sequence
location: 16805..17017
location: region:16805-17017:1
so has part: feature:16805-17017:1:exon
subclass of: SO_0000010

position:16805:1
position: 16805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17017:1
position: 17017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16805-17017:1:exon

HMPREF0389_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: yaaA
locus tag: HMPREF0389_RS00055
old locus tag: HMPREF0389_01186
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013655066.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S4 domain-containing protein YaaA
translation: MKEQRIKIDTEFIKLDQLLKLSNQVSTGGEAKVCILSEEVKVNGEIETRRGKKIRSGDKVEINGELIVVE
SIO_010081: HMPREF0389_RS00055
subclass of: SO_0000673
so part of: HMPREF0389_RS00055
location: 16805..17017
location: region:16805-17017:1
so has part: feature:16805-17017:1:exon

WP_014261692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16805-17017:1:exon

HMPREF0389_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: recF
locus tag: HMPREF0389_RS00060
old locus tag: HMPREF0389_01185
so part of: sequence
location: 17025..18092
location: region:17025-18092:1
so has part: feature:17025-18092:1:exon
subclass of: SO_0000010

position:17025:1
position: 17025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18092:1
position: 18092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17025-18092:1:exon

HMPREF0389_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: recF
locus tag: HMPREF0389_RS00060
old locus tag: HMPREF0389_01185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013360229.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA replication/repair protein RecF
translation: MKIHQLTLKNFRNYEQLELLFKEGANVFVGQNGQGKTNVLEAISLFSVGRSFRTVRDLDMVAFGQDAATVSAIVENLHGRYTIDMKLGKSIKKAVKINSVPIEKLQDLFGVLNIVVFSPDDLKLVKDGPKERRLFLDREISQLKPRYYRILSEYYKVLNQRNTLLKQEVDEVLLEIYTQQIAKSGFQIHKMREEFIEHIREFAQEIHSKISSKKEVLEIEYEPNVYAISEEEYFRYLMDGKEHDFIRKHSTRGIHKDDVALVINEMDIRHFGSQGQKRSAAISLKLSEIQMIYQDTGEYPIVLLDDIFSELDYSRQRMLLDYVTNTQVFVTTAEKFLDNGKIYAVENGKISVEEG
SIO_010081: HMPREF0389_RS00060
subclass of: SO_0000673
so part of: HMPREF0389_RS00060
location: 17025..18092
location: region:17025-18092:1
so has part: feature:17025-18092:1:exon

WP_014261693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17025-18092:1:exon

HMPREF0389_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: gyrB
locus tag: HMPREF0389_RS00065
old locus tag: HMPREF0389_01184
so part of: sequence
location: 18104..20020
location: region:18104-20020:1
so has part: feature:18104-20020:1:exon
subclass of: SO_0000010

position:18104:1
position: 18104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20020:1
position: 20020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18104-20020:1:exon

HMPREF0389_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: gyrB
locus tag: HMPREF0389_RS00065
old locus tag: HMPREF0389_01184
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003434229.1
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit B
translation: MSETENKNVQYGADQIQVLEGLEPVRKRPGMYIGSTGAKGLHHLVYEVVDNAIDEALAGFCKTIYVAIEEGNAIRVIDDGRGIPTEVHPKTGKSTVETVLTVLHAGGKFGTGGYKVSGGLHGVGVSVVNALSTFFRVTVKRGGKIYVQEFSKGISETELQEVGVTEETGTMVEFQPDAEIFDELEYRYETLEYRLRELAFLNKGISIVLEDKRAGQEQKKEFSYLGGLKEFVVFLNKNKTPLHKDVIHFEKQIDEYYLEIAIQYTDAYIENIYSFANNINTIEGGMHLIGFKTALTRTINDYLKKSNKNKEESLSGEDVREGLTAIISIKLPEPQYEGQTKTKLGNPQVRSVVDSFLAEYFGAYLEENPQVAKIIIEKAMNARSAREAAKRARDLTRRKGVLDSTSLPGKLADCSERDPALSEIYIVEGDSAGGSAKQGRDRKTQAILPLRGKILNVEKSRLDRILTSEEIKNMITAFGCSIGEEFDESKLRYHKIVIMTDADVDGAHIRTLLLTFMFRYMKPLIENGYVYIAQPPLFKIHRGKKEVYAYNEKELPAILQEFGEGHKPGIQRYKGLGEMNPEQLWETTMNPDTRTLLRVTVEDFSGADDTFSMLMGDKVEPRREFIHNNAQYVKNLDI
SIO_010081: HMPREF0389_RS00065
subclass of: SO_0000673
so part of: HMPREF0389_RS00065
location: 18104..20020
location: region:18104-20020:1
so has part: feature:18104-20020:1:exon

WP_014261694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18104-20020:1:exon

HMPREF0389_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: gyrA
locus tag: HMPREF0389_RS00070
old locus tag: HMPREF0389_01183
so part of: sequence
location: 20035..22473
location: region:20035-22473:1
so has part: feature:20035-22473:1:exon
subclass of: SO_0000010

position:20035:1
position: 20035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22473:1
position: 22473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20035-22473:1:exon

HMPREF0389_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: gyrA
locus tag: HMPREF0389_RS00070
old locus tag: HMPREF0389_01183
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013360231.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA gyrase subunit A
translation: MSQEEMRDKIIEVDLKHEMEQSYIEYAMSVIVGRALPDVRDGLKPVHRRILYSMGQNNLTPDKPYRKSATIVGDVLGKYHPHGDTAVYDALVKMAQDFSMRYPLVDGHGNFGSIDGDSAAAMRYTESRMEKLSMEMLRDLNKETVDMVPNYDENEWEPSVLPARYPNLLVNGSNGIAVGMATSIPPHNLGEVIDAVVELIDNEDATLEDILKHIKGPDFPTGAHIMGNSSMLQAYRTGRGKVVQRAKTSFEEMSGGKTRIVVTEIPYQVNKARLVEKIAELMKDKRIDGITHIGDESNRKGMRIVIELRRDVNPDIVLNQLFKFSPLQQVFSIIMLALVNNIPKVLTLEQMLRLYLKHQEEVVTRRTQFDLKKAQDRIHLVEGLLKAIDHIDEVIAIIRSSYSDAMERLMERFDFSEIQAKAILDMQLRRLQGLEKEKLEDEQKDLQQKIDYYQEILSDRSLLLSIIKEEILEIKAKYGNERRTTFLASYEDIDIKDMIPDDEVTVTLTHLGYIKRVGIDTYKTQKRGGKGIASMSTRDEDFVDKLLLTSNHSKVIFFTNMGRIYRLNTYEIPESSRTAKGTNIVNILPLEDGEKVNTMLSIREEQASSGFVVMCTRKGIMKKTPLEEFQRSNRNGLIAISLKEDDELIGVELTDGNCNIICVARNGKAIMFDESDIRSMGRTAQGVRAMNLEEGDEIVSMMIADPEKDVLIISERGYGKRTPIAEYNLQTRGGKGSRTYKITEKTGRLVGGKVVSNDDEIMIVNIDGTLIRMEVKGISVLSRVTSGVRLMKTAENQDIASFEKIEISEEEE
SIO_010081: HMPREF0389_RS00070
subclass of: SO_0000673
so part of: HMPREF0389_RS00070
location: 20035..22473
location: region:20035-22473:1
so has part: feature:20035-22473:1:exon

WP_014261695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20035-22473:1:exon

HMPREF0389_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00075
old locus tag: HMPREF0389_01182
so part of: sequence
location: 22653..22934
location: region:22653-22934:1
so has part: feature:22653-22934:1:exon
subclass of: SO_0000010

position:22653:1
position: 22653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22934:1
position: 22934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22653-22934:1:exon

HMPREF0389_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00075
old locus tag: HMPREF0389_01182
inference: COORDINATES: protein motif:HMM:NF024143.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YtxH domain-containing protein
translation: MFTRRRESHLLQTVGATVIGMSAGVILGMLIAPKQGKEIRACITDKTRGLVDGAKDLGKNLKEAIQADDEEIFYYDDDDKLVFSKNFMEKEEE
SIO_010081: HMPREF0389_RS00075
subclass of: SO_0000673
so part of: HMPREF0389_RS00075
location: 22653..22934
location: region:22653-22934:1
so has part: feature:22653-22934:1:exon

WP_014261696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22653-22934:1:exon

HMPREF0389_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00080
old locus tag: HMPREF0389_01181
so part of: sequence
location: 23017..23274
location: region:23017-23274:1
so has part: feature:23017-23274:1:exon
subclass of: SO_0000010

position:23017:1
position: 23017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23274:1
position: 23274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23017-23274:1:exon

HMPREF0389_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00080
old locus tag: HMPREF0389_01181
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF948 domain-containing protein
translation: MWEIGVLLAGIGFLILCIFGAVTLRDFGYAAKRISHILDENEKSIKEITDSVADITDSVDNVFTTSEKVIKALTTFGAIRSVKKK
SIO_010081: HMPREF0389_RS00080
subclass of: SO_0000673
so part of: HMPREF0389_RS00080
location: 23017..23274
location: region:23017-23274:1
so has part: feature:23017-23274:1:exon

WP_014261697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23017-23274:1:exon

HMPREF0389_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00085
old locus tag: HMPREF0389_01180
so part of: sequence
location: 23298..23621
location: region:23298-23621:1
so has part: feature:23298-23621:1:exon
subclass of: SO_0000010

position:23298:1
position: 23298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23621:1
position: 23621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23298-23621:1:exon

HMPREF0389_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00085
old locus tag: HMPREF0389_01180
inference: COORDINATES: protein motif:HMM:TIGR00377.1
GO function: GO:0043856 - anti-sigma factor antagonist activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: STAS domain-containing protein
translation: MSVIVEKKYSEENNQTEMVVSGEIDIYGSEKFREEIQALVKQYPDKDLSIDMTNLDYIDSTGLGVLIGALKVLKANQKKISLHGLKPSVYKVFTITSLTQLFEVKEA
SIO_010081: HMPREF0389_RS00085
subclass of: SO_0000673
so part of: HMPREF0389_RS00085
location: 23298..23621
location: region:23298-23621:1
so has part: feature:23298-23621:1:exon

WP_014261698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23298-23621:1:exon

HMPREF0389_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00090
old locus tag: HMPREF0389_01179
so part of: sequence
location: 23682..24068
location: region:23682-24068:1
so has part: feature:23682-24068:1:exon
subclass of: SO_0000010

position:23682:1
position: 23682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24068:1
position: 24068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23682-24068:1:exon

HMPREF0389_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00090
old locus tag: HMPREF0389_01179
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007285196.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MDLPTNPEYVSVARLTVSAISNTIGFNVEEIEDIKIALSEACANAIRHSQKDTFSLHFEVEDGKLTIQVSDQGVGFDAKEVKEPVVEEMKESGLGFFIIESLMDEVKIDSEVGKGTKIRMSKFLEDNK
SIO_010081: HMPREF0389_RS00090
subclass of: SO_0000673
so part of: HMPREF0389_RS00090
location: 23682..24068
location: region:23682-24068:1
so has part: feature:23682-24068:1:exon

WP_049770219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23682-24068:1:exon

HMPREF0389_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00095
old locus tag: HMPREF0389_01178
so part of: sequence
location: 24069..24890
location: region:24069-24890:1
so has part: feature:24069-24890:1:exon
subclass of: SO_0000010

position:24069:1
position: 24069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24890:1
position: 24890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24069-24890:1:exon

HMPREF0389_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00095
old locus tag: HMPREF0389_01178
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013360237.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SigB/SigF/SigG family RNA polymerase sigma factor
translation: MNKENGKSNKKTAQSFAENPKFLGKTEKELFLLYNEDKQNRELRNELIQKNLYIAEILSKKYLNKGIEYDDIFQVASLGLILAIERYDVTKGFKFSSFATPTIIGEIKKYFRDKGWSIRVPRKIQELSKKVTQAREYLQNEKGAIPEVKDIAEYLEISEEEVMEVMEASQVYHLKSLDVTYENGGEDKEVSLIDVLGDEDKSFSEIENRDFFEKMFQKLDDVEREIIIGRFFKQKTQMKIAEELNISQMTVSRIEKKVLSKIKKEYERTMSEG
SIO_010081: HMPREF0389_RS00095
subclass of: SO_0000673
so part of: HMPREF0389_RS00095
location: 24069..24890
location: region:24069-24890:1
so has part: feature:24069-24890:1:exon

WP_014261700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24069-24890:1:exon

HMPREF0389_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00100
old locus tag: HMPREF0389_01177
so part of: sequence
location: 25430..26044
location: region:25430-26044:1
so has part: feature:25430-26044:1:exon
subclass of: SO_0000010

position:25430:1
position: 25430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26044:1
position: 26044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25430-26044:1:exon

HMPREF0389_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00100
old locus tag: HMPREF0389_01177
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012159807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrolase
translation: MPSAVYSASGINIFGKRIKSLLFSTDLSIIKNNNADGIIAVYPFTPQISISHAIISASATPVFCGVGGGVTSGQRSIDIAMSCELNGAYGVVLNAPATNALLMEMRKRLDIPIVVTIISEKEDFEKRIKSGAAIFNVSGGVNTAKIVRKIRENHPYFPIIATGGNTEESILETIEAGANVISYTPPSTAEIFAQIMKNYRDTMY
SIO_010081: HMPREF0389_RS00100
subclass of: SO_0000673
so part of: HMPREF0389_RS00100
location: 25430..26044
location: region:25430-26044:1
so has part: feature:25430-26044:1:exon

WP_242821734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25430-26044:1:exon

HMPREF0389_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00105
old locus tag: HMPREF0389_01176
so part of: sequence
location: 26487..27245
location: region:26487-27245:1
so has part: feature:26487-27245:1:exon
subclass of: SO_0000010

position:26487:1
position: 26487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27245:1
position: 27245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26487-27245:1:exon

HMPREF0389_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00105
old locus tag: HMPREF0389_01176
EC number: 3.5.1.28
inference: COORDINATES: protein motif:HMM:NF013670.2
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetylmuramoyl-L-alanine amidase
translation: MKKSKMKSGLLLILATILFVQVFVVDYSLAKPKKQTKTEELKGMVIGLDPGHQKKGDNKKEPVSPNSKRMKPKVSSGTAGVVTKVSEYELNLAVAKKMKAKLESMGATVVMSRETHDVNISNIERAKLMNDAECDIVIRIHADGSDKSSVNGYSILIPSGKDTTSIQKKSKSFATLLDNSMKNQVKGIRSRGLVERSDLTGFNWSTVPVILLEMGFMSNPSDDKTMQTKEYQEQLIQSLANACIQYQKANKK
SIO_010081: HMPREF0389_RS00105
subclass of: SO_0000673
so part of: HMPREF0389_RS00105
location: 26487..27245
location: region:26487-27245:1
so has part: feature:26487-27245:1:exon

WP_207635078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26487-27245:1:exon

HMPREF0389_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00110
old locus tag: HMPREF0389_01175
so part of: sequence
location: 27259..27993
location: region:27259-27993:1
so has part: feature:27259-27993:1:exon
subclass of: SO_0000010

position:27259:1
position: 27259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27993:1
position: 27993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27259-27993:1:exon

HMPREF0389_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00110
old locus tag: HMPREF0389_01175
inference: COORDINATES: protein motif:HMM:NF013077.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SagB/ThcOx family dehydrogenase
translation: MDYTEHRNMMKSTFHIPKEERSDKRNGIKEPELVKRIADVKEKIVLPFDGLKHLSEKNLWEISESRKSRRVYTEENLSLSELSYLLALTQKIGERGEHFRVVPSGGSRHAYETYLAIQRVDGLKQGIYHYHSKEHALELVEEIDNLQEPLLKVAERQVFLAKGAVVFFWTCIPYRGEWRYMEDSHKSMLLDAGHIGQALYLAVEAIDLGVCTVAGYHQEEADALVGVDGTEEYTVYLASVGKCK
SIO_010081: HMPREF0389_RS00110
subclass of: SO_0000673
so part of: HMPREF0389_RS00110
location: 27259..27993
location: region:27259-27993:1
so has part: feature:27259-27993:1:exon

WP_041250721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27259-27993:1:exon

HMPREF0389_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00115
old locus tag: HMPREF0389_01174
so part of: sequence
location: 28479..30200
location: region:28479-30200:1
so has part: feature:28479-30200:1:exon
subclass of: SO_0000010

position:28479:1
position: 28479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30200:1
position: 30200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28479-30200:1:exon

HMPREF0389_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00115
old locus tag: HMPREF0389_01174
EC number: 6.1.1.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011971807.1
GO function: GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO process: GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: proline--tRNA ligase
translation: MKMSRMYLPTLREVPSDAEVISHQLLLRAGLIRKLVSGVYSYLPLGKRVLAKIERVIREEMDAANSQEVLMSAIQPSELWKESGRWENFGPEMFRLYDRNEREFCLGPTHEEIFTSLVRDELKSYKQLPLSLYQIQTKYRDEKRPRFGVIRAREFIMKDAYTFDRDPDGMKQSYQEMWEAYTKIFDRLHMKYRVVEGDSGAMGGSDSHEFTAMAESGESTVMYAEGCDYAATDEKAECIFELPVQDTEKKELEKVSTPNVGTIEDLENFFQVSADRFAKTLLLTVKGEPIAVMIPGHRELNLIKLLKVVDAAEHEIEMAEEETVKEITGARVGFAGPIGLKKDIPLYIDKRVTEMTNIIVGANESDFHYKNANYGKDFEGTVVDDLILTQEGDICPQDRRLRLKSDRGIEVGNIFQLGTKYSDSLNLTYLDQDGKSKKVWMGSHGIGVSRTMAAIIEQNYDEKGIIWPLVVAPYHILITVVNAKKEDQMQLGEQLYQEYTKLGYEVLFDDRNERAGVKFNDADLIGIPIRINVGRRAEEGIVEFSLRRGGEKEEIPVSEIAQKVKDEFAYQGL
SIO_010081: HMPREF0389_RS00115
subclass of: SO_0000673
so part of: HMPREF0389_RS00115
location: 28479..30200
location: region:28479-30200:1
so has part: feature:28479-30200:1:exon

WP_041250722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28479-30200:1:exon

HMPREF0389_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00120
old locus tag: HMPREF0389_01173
so part of: sequence
location: 30541..31431
location: region:30541-31431:1
so has part: feature:30541-31431:1:exon
subclass of: SO_0000010

position:30541:1
position: 30541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31431:1
position: 31431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30541-31431:1:exon

HMPREF0389_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00120
old locus tag: HMPREF0389_01173
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003490293.1
GO function: GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetrahydrofolate dehydrogenase/cyclohydrolase catalytic domain-containing protein
translation: MVELERSVTMVLEEKLLLGTTVAKDKTEQLREKVEELHKQGIKPKLVMMRVGDKADDLAYQRSALSRMEKVNILSEVQEFPNDVTEEVFLRQLEENNQNDEVHGILIFLPLPKHLDLKKVKECISPDKDIDAISPINIARLMNAEECFVPCTPKAVMELLSYYNIPLQGKHVVVIGRSMVIGKPVSMLLLNENATVTMTHSKTTNLQELTKRADIIVCALGKSKFLTEEYVSPHSIVIDVGINVDETGALTGDADTEQILPIVKAITPVPRGVGSVTTVMLAKQVIESAERGLQQK
SIO_010081: HMPREF0389_RS00120
subclass of: SO_0000673
so part of: HMPREF0389_RS00120
location: 30541..31431
location: region:30541-31431:1
so has part: feature:30541-31431:1:exon

WP_014261705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30541-31431:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 546269
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01831
inference: COORDINATES: profile:INFERNAL:1.1.4
note: THF riboswitches regulate genes encoding folate transporters and folate metabolism; They are most commonly found in Clostridiales and Lactobacillales; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: tetrahydrofolate
so part of: sequence
location: 31977..32072
location: region:31977-32072:1
so has part: feature:31977-32072:1:region

position:31977:1
position: 31977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32072:1
position: 32072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31977-32072:1:region

HMPREF0389_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00125
old locus tag: HMPREF0389_01172
so part of: sequence
location: 32117..32641
location: region:32117-32641:1
so has part: feature:32117-32641:1:exon
subclass of: SO_0000010

position:32117:1
position: 32117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32641:1
position: 32641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32117-32641:1:exon

HMPREF0389_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00125
old locus tag: HMPREF0389_01172
inference: COORDINATES: protein motif:HMM:NF018816.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: folate family ECF transporter S component
translation: MKKSKFSTQQLVMGGLLLALAVIVSYQNIYLYPPHSGRITLRFIPIIYGGILLGPQVGLLMGALQDPLTYFLTPGSPGTYFPGFMLTSMLMGFFPGFIIKSIRDAKMWNVTLVAFVSYIITMGLDSLWLSILMGKAYLYFLTTRAIPNLVQVAITVAVLMVLVKRVKIKDFRNE
SIO_010081: HMPREF0389_RS00125
subclass of: SO_0000673
so part of: HMPREF0389_RS00125
location: 32117..32641
location: region:32117-32641:1
so has part: feature:32117-32641:1:exon

WP_041250884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32117-32641:1:exon

HMPREF0389_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00130
old locus tag: HMPREF0389_01171
so part of: sequence
location: 33001..35589
location: region:33001-35589:1
so has part: feature:33001-35589:1:exon
subclass of: SO_0000010

position:33001:1
position: 33001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35589:1
position: 35589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33001-35589:1:exon

HMPREF0389_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00130
old locus tag: HMPREF0389_01171
inference: COORDINATES: protein motif:HMM:TIGR01587.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated helicase/endonuclease Cas3
translation: MHNSSNLLAHYDRENQKEQLLTNHLLNTATIASDIGKEIGMGNLCFLLGVLHDSGKADIQFQTMLKNMPGSKNIRVIHSTAGAYFLFETKYNRNLEDRKESKSYNEFIEVCMYVIEAHHGLFDIVGKRDEDGFSGMDYVNKIFERVEHYQADSRYDKEKLKHFIDNEVALIVKSELGFDSIEELIDSAFQEYHHIMEQFTKNYVPFESESEKNRKRNKNHKLKERRFFDMMLVRLLLSIIKTADVEDTINAYDFLIQRRTEEEIRCLKRHYIERIEGEYKKYHRNNNATKPINQMRNQIADTLLVKGQQDNAGIYRLEVPTGAGKTKAVLRYALHQMDDKSKNRFVYITAFLSVLEQNAGEIKAVIGEDGVLEHHSNVDLFHGTDKYSKGSFDEKEDIEYVQRSFIVDSWDSPVVLTTMVQFFSTLFKGKSANLRRFSSLINSVIVIDEVQSLPIEVMYFFNLTMNFLRNVMNCTVVLCTATQPIYDDKSIRHKLQYGSLSEENKNADLVLLSQEDRKCFDRYSVKKFKDRTVDSLENSHTSIEEVSQFVFENRDKSILIVVNTKAAAGSIVRSIDALNIPESDVYYLTTNLCPAHRKNIISEIKERLSLGDKIICVSTQLIEAGVDVDFELVMRSYAGLDSIVQVAGRCNREGKLPNGGEVILFNPDEGIEHTKRILGIADKKKITEEILAQRHGEIQLGSLVEEFYTSYYFNEADSSNRMEYRLKNDESSLFDLFIKGGGIVKSDIKNETGSLRGRLREVADKFQLISDDTEGVFVFYEDGIEDLNDLLRIAEQRMISSQDWLKIKQLIRKLQPYSINIYQSNKLNEFVDSYLNGSIKVLQNDHYNERFGASEEIDSLII
SIO_010081: HMPREF0389_RS00130
subclass of: SO_0000673
so part of: HMPREF0389_RS00130
location: 33001..35589
location: region:33001-35589:1
so has part: feature:33001-35589:1:exon

WP_014261707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33001-35589:1:exon

HMPREF0389_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: cas5c
locus tag: HMPREF0389_RS00135
old locus tag: HMPREF0389_01170
so part of: sequence
location: 35777..36520
location: region:35777-36520:1
so has part: feature:35777-36520:1:exon
subclass of: SO_0000010

position:35777:1
position: 35777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36520:1
position: 36520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35777-36520:1:exon

HMPREF0389_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: cas5c
locus tag: HMPREF0389_RS00135
old locus tag: HMPREF0389_01170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006000242.1
GO component: GO:0005575 - cellular_component [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-C CRISPR-associated protein Cas5c
translation: MSKKLEMEKSKHFYMRITGDYALWADPATKGGGERISYQVPTAQAIQGICDAVYFKPTIRNVVDAIKVVNPVRFHSMGYRALYGDLSAGLNYVTVLENVEYLVQYHFEWNLYRQDLSRDRIMKKHETITERSLRKGGRRDVFLGAREFLGYVEQITEQEYLTEKTFYYGSDFDLGNIFHSFIYSNDETEPLKSLFTHTIMRDGIIQIKPQEECEITNILSSYTIKAHKGVVSVDEELKEYGEGGESI
SIO_010081: HMPREF0389_RS00135
subclass of: SO_0000673
so part of: HMPREF0389_RS00135
location: 35777..36520
location: region:35777-36520:1
so has part: feature:35777-36520:1:exon

WP_014261708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35777-36520:1:exon

HMPREF0389_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: cas8c
locus tag: HMPREF0389_RS00140
old locus tag: HMPREF0389_01169
so part of: sequence
location: 36517..38439
location: region:36517-38439:1
so has part: feature:36517-38439:1:exon
subclass of: SO_0000010

position:36517:1
position: 36517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38439:1
position: 38439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36517-38439:1:exon

HMPREF0389_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: cas8c
locus tag: HMPREF0389_RS00140
old locus tag: HMPREF0389_01169
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006000244.1
GO component: GO:0005575 - cellular_component [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-C CRISPR-associated protein Cas8c/Csd1
translation: MSVLTNLLRCYEYSEKEGLVGEYNGNDAVLLPLYHQSITSKKNNVLKVTLDEEGQLLNAEFAVDGEVYLFPITEDSVARSSGVAPHPLEDKMQYCISKIADKKKIEAYRKEFDNFYDYAEHPKVKLFLNAVKLFLSNEKNYALILSKLPLKDIVETGKGKIKYTSEKNKKTEYDFKDTFVCFEVRCHNGSYLKVNTFSEMQEEFVSYIDDRYEREGTLSICNISGTKETITEKHRGLMGTAKVISVSNNKETYFGRFHNGSDIIRVGRKSSEKIHLMLKFLLENRNSHIHLADTLFLVNWFSGDIKNTMAFDLTGSDMDDDMEEEGKNPVSESNKEISRAFIRGTGKLNPEEQYYIMLVDKSSNGRMSIRYYKEMPNSQLIENLQSWQKKYIWEQWKQAKETYVEYVPSLHYILLASYGIERNKILVIDDGKFKKDQFQNLVTALVEGKSVPSNIKNALAQNIRNRQKYSEKWRFMLLVSLAILSEGRKEYQEMREESHQTRSYLYGRLLAIYEGLEEAVLRDQQRSSLASSDDSSKKSKIRATNALRYWNSFVNKPDTTMKTLELATKYCASYILSSNKPDYLVGVLIKTEKAKSEIFELLDTQENRKYKTNTQLDNDFIFGYYAQKKDLYTKKENDDE
SIO_010081: HMPREF0389_RS00140
subclass of: SO_0000673
so part of: HMPREF0389_RS00140
location: 36517..38439
location: region:36517-38439:1
so has part: feature:36517-38439:1:exon

WP_014261709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36517-38439:1:exon

HMPREF0389_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: cas7c
locus tag: HMPREF0389_RS00145
old locus tag: HMPREF0389_01168
so part of: sequence
location: 38426..39274
location: region:38426-39274:1
so has part: feature:38426-39274:1:exon
subclass of: SO_0000010

position:38426:1
position: 38426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39274:1
position: 39274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38426-39274:1:exon

HMPREF0389_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: cas7c
locus tag: HMPREF0389_RS00145
old locus tag: HMPREF0389_01168
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010922510.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-C CRISPR-associated protein Cas7/Csd2
translation: MMMNKVDFIMTFTVQNANVNGDPLSGNRPRMDSNGLGEVSDVCLKRKIRNRLQDNGNAIFVQSRERTEDGYTSLEKRYAAHFKKTMSDEEVEKGFHEKWIDVRAFGQVITYDKRSIGIRGPISIGIAKSLEPITIEDMQITKSVNGMEQKNPNDRAPDTLGMKHFVEFGTYVVHGAVNSYFAEKTGFNEKDLEEFKAALKTIFVNDASSARPDGSIEVKQIFWFEHSCKVGDVSSAKIKSLLKWDKEDKEHRCYEDYHIHIDENALKEYEKLGLKLTVIEGL
SIO_010081: HMPREF0389_RS00145
subclass of: SO_0000673
so part of: HMPREF0389_RS00145
location: 38426..39274
location: region:38426-39274:1
so has part: feature:38426-39274:1:exon

WP_041250724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38426-39274:1:exon

HMPREF0389_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: cas4
locus tag: HMPREF0389_RS00150
old locus tag: HMPREF0389_01167
so part of: sequence
location: 39277..39930
location: region:39277-39930:1
so has part: feature:39277-39930:1:exon
subclass of: SO_0000010

position:39277:1
position: 39277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39930:1
position: 39930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39277-39930:1:exon

HMPREF0389_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: cas4
locus tag: HMPREF0389_RS00150
old locus tag: HMPREF0389_01167
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006000247.1
GO function: GO:0004518 - nuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated protein Cas4
translation: MYNEDDYLMLSGIQHYYFCKRQWALIHIEQQWAENQSTMEGNYLHEKADMPFLKEKRRGFLMSRAVPVSSKRLGLSGVIDVIEFQKSDHGIKLNRHKGTWFPEIIEYKRGKEKPDERDIVQLCAQVICLEEKWDIKIDKSYLYYFKTNKRLEVSITDELRKKVIEISNDMHHLYHQQKIPPAEFFKNCQLCSLYDICMPRITKRKASVEHYLYEDET
SIO_010081: HMPREF0389_RS00150
subclass of: SO_0000673
so part of: HMPREF0389_RS00150
location: 39277..39930
location: region:39277-39930:1
so has part: feature:39277-39930:1:exon

WP_014261711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39277-39930:1:exon

HMPREF0389_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: cas1c
locus tag: HMPREF0389_RS00155
old locus tag: HMPREF0389_01166
so part of: sequence
location: 39927..40958
location: region:39927-40958:1
so has part: feature:39927-40958:1:exon
subclass of: SO_0000010

position:39927:1
position: 39927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40958:1
position: 40958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39927-40958:1:exon

HMPREF0389_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: cas1c
locus tag: HMPREF0389_RS00155
old locus tag: HMPREF0389_01166
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006000249.1
GO function: GO:0004519 - endonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-C CRISPR-associated endonuclease Cas1c
translation: MKKLLNTLYVTKEQAYLSKDGQNVVITEDGVQIGRYPIHILNDIICFSYLGVSPALMRLCSENNIGISFLTPQGQFCGRVIGKENGNVLLRREQYRMADSETSVGFVRNIIYAKGLNSKRILRRCLLDHKDKVNSKKFEENIAKIDGCLAKIKESDEKDTIRGYEGIVAKTYFDCFDELILQQKSDFYFNERSKRPPEDNVNSMLSLLYTLLAHDVGSALSAVGIDSYVGFMHTDRPGRMSMALDMMEELRGFMVDRTVLTMINLKIVKENDFEKKESGAVLIKDSGRKKIIEYWQKRKQTEIVHPYLKEKVKIGLLPHVQSMLLNRYIRGDLESYPPFIIKE
SIO_010081: HMPREF0389_RS00155
subclass of: SO_0000673
so part of: HMPREF0389_RS00155
location: 39927..40958
location: region:39927-40958:1
so has part: feature:39927-40958:1:exon

WP_014261712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39927-40958:1:exon

HMPREF0389_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: cas2
locus tag: HMPREF0389_RS00160
old locus tag: HMPREF0389_01165
so part of: sequence
location: 40962..41255
location: region:40962-41255:1
so has part: feature:40962-41255:1:exon
subclass of: SO_0000010

position:40962:1
position: 40962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41255:1
position: 41255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40962-41255:1:exon

HMPREF0389_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: cas2
locus tag: HMPREF0389_RS00160
old locus tag: HMPREF0389_01165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002280569.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endonuclease Cas2
translation: MLVIIAYDVETSTQEGRTRLRKVAKLCVNYGQRVQNSVFECSVDPAQLVKIKHQLEKMIDPDSDNIRIYHMGKNWERKIETLGKSESYNPDSGVLFV
SIO_010081: HMPREF0389_RS00160
subclass of: SO_0000673
so part of: HMPREF0389_RS00160
location: 40962..41255
location: region:40962-41255:1
so has part: feature:40962-41255:1:exon

WP_014261713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40962-41255:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 546269
inference: COORDINATES: alignment:crt:1.2
inference: COORDINATES: alignment:pilercr:v1.02
rpt family: CRISPR
rpt type: direct
rpt unit range: 41422..41453
rpt unit seq: gtcgcgtcccacaggggcgcgtggattgaaat
so part of: sequence
location: 41422..43820
location: region:41422-43820:1
so has part: feature:41422-43820:1:region

position:41422:1
position: 41422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43820:1
position: 43820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41422-43820:1:region

HMPREF0389_RS09120
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS09120
old locus tag: HMPREF0389_01164
so part of: sequence
location: 43943..44755
location: region:43943-44755:1
so has part: feature:43943-44755:1:exon
subclass of: SO_0000010

position:43943:1
position: 43943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44755:1
position: 44755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43943-44755:1:exon

HMPREF0389_RS09120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS09120
old locus tag: HMPREF0389_01164
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKTEFRCNKYSPGVLYMMVIVGVATGLLLFYGFLVVSGINKGPYDGPIYFQDNPRHAIYLIFSLIPIAMGLPAWIAKKYWSSKEEEGQLELYDEYAVLYWKNKEFKIEKGELQIKIPEPQAIWYSTYLLQFPGHRIVLVNSLKEGKEKRRGACSLDIAISELSPYKKLKKRKQKDRAVFNFHGIRIVFGITTPAVFADSPYYVDYQNIVTIPNAPFVTCMVRERANPVHVVADVQIDIKLLQDDSLEEKHLSRQAILRMVELDKQIEID
SIO_010081: HMPREF0389_RS09120
subclass of: SO_0000673
so part of: HMPREF0389_RS09120
location: 43943..44755
location: region:43943-44755:1
so has part: feature:43943-44755:1:exon

WP_207635080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43943-44755:1:exon

HMPREF0389_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00170
old locus tag: HMPREF0389_01163
so part of: sequence
location: 44794..45030
location: region:44794-45030:1
so has part: feature:44794-45030:1:exon
subclass of: SO_0000010

position:44794:1
position: 44794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45030:1
position: 45030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44794-45030:1:exon

HMPREF0389_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00170
old locus tag: HMPREF0389_01163
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKIMTKAICIKNITTFSFMTLTSFLVLGVFVVKLIEDIQKGKELFIPGVAVLFAGAIVVMVFSIIQIVKHIRMLTKL
SIO_010081: HMPREF0389_RS00170
subclass of: SO_0000673
so part of: HMPREF0389_RS00170
location: 44794..45030
location: region:44794-45030:1
so has part: feature:44794-45030:1:exon

WP_014261715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44794-45030:1:exon

HMPREF0389_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00175
old locus tag: HMPREF0389_01162
so part of: sequence
location: 45170..45907
location: region:45170-45907:1
so has part: feature:45170-45907:1:exon
subclass of: SO_0000010

position:45170:1
position: 45170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45907:1
position: 45907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45170-45907:1:exon

HMPREF0389_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00175
old locus tag: HMPREF0389_01162
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009530346.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4241 domain-containing protein
translation: MELSKEWLEQYEQVKDLLVSPVNFSELFKSDEVEGKNLFLLNMGTVNFTTDEILARDPLVWLKREEEPYFTKVPMGTYPLETLVVELEEDHYRYIASRVRFHEKDSVVYRQALEGTENLEGIDSDSFFGFNVDAGLATIVDTNTRDAYCDFVDAWEKEHPEGNMYDDFFAEEFRKSYLEHPEFQRDGGDWINFKIPNTEYTVPMIQSGFGDGKYPVYFGYDESGELCDVVMEYIYVGAEETDEEE
SIO_010081: HMPREF0389_RS00175
subclass of: SO_0000673
so part of: HMPREF0389_RS00175
location: 45170..45907
location: region:45170-45907:1
so has part: feature:45170-45907:1:exon

WP_014261716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45170-45907:1:exon

HMPREF0389_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00180
old locus tag: HMPREF0389_01161
so part of: sequence
location: 46156..46608
location: region:46156-46608:1
so has part: feature:46156-46608:1:exon
subclass of: SO_0000010

position:46156:1
position: 46156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46608:1
position: 46608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46156-46608:1:exon

HMPREF0389_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00180
old locus tag: HMPREF0389_01161
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVFDGQNDVAIFKIGYMEDHTGKFDERLEKCGITVHYETEPPRGDGIYSVILSGNQKLPFWIYDRDIILVGEDFMIVESVQYDTFEPISTVMIDIKKARYADFKEWYPDICVTKDGIELDNRFHKVKKMILKNTCDLEWIDLSTGIGTTK
SIO_010081: HMPREF0389_RS00180
subclass of: SO_0000673
so part of: HMPREF0389_RS00180
location: 46156..46608
location: region:46156-46608:1
so has part: feature:46156-46608:1:exon

WP_041250725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46156-46608:1:exon

HMPREF0389_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00185
old locus tag: HMPREF0389_01160
so part of: sequence
location: 46839..47477
location: region:46839-47477:1
so has part: feature:46839-47477:1:exon
subclass of: SO_0000010

position:46839:1
position: 46839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47477:1
position: 47477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46839-47477:1:exon

HMPREF0389_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00185
old locus tag: HMPREF0389_01160
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKEFQKGKNRLREIGLWSNEKVWEDEMNLIASIGKSAENKTVGRIGGNLPCLFLDRESEIEGYRFYMMFQNPDNHEEYFSIFVPEDYGVMIDNNTYPNCSVKVFSHRFSKESDNTNYTLKGIKKSFLTGYSEVDDNTFDFFTKSRFPQLIQEESYDTEKLEKEGYEFFVQIDEDYYTEDLINENYIFGYGALYLYRHSENGTVIAGFWQYS
SIO_010081: HMPREF0389_RS00185
subclass of: SO_0000673
so part of: HMPREF0389_RS00185
location: 46839..47477
location: region:46839-47477:1
so has part: feature:46839-47477:1:exon

WP_207635081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46839-47477:1:exon

HMPREF0389_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00190
old locus tag: HMPREF0389_01159
so part of: sequence
location: 47726..48520
location: region:47726-48520:1
so has part: feature:47726-48520:1:exon
subclass of: SO_0000010

position:47726:1
position: 47726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48520:1
position: 48520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47726-48520:1:exon

HMPREF0389_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00190
old locus tag: HMPREF0389_01159
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006000851.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4261 domain-containing protein
translation: MGIFKNPFGKKNKKPEQKGQLVLSMPMFQGDSSYSADKVIQDLQSYWGLKVDEIEHSDTTISFNIDGEVIVIGLIPAPIPDEEFESMYSYSYLWEDAEQEIKEHTQHAIVSILGSSTSALKRYSILSKVNASILRTSETAIGVYQGASTLLLPKDFYIDLADLLLEDLLPVQLWVYIGIINNNDKTGLYTYGMKEFGKSEIEIIDTSMESDDAYVFLLTVLQYIIEQDVTLEHGETIGLTEDQKIKITESKAIYLDGNSLKLEL
SIO_010081: HMPREF0389_RS00190
subclass of: SO_0000673
so part of: HMPREF0389_RS00190
location: 47726..48520
location: region:47726-48520:1
so has part: feature:47726-48520:1:exon

WP_014261719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47726-48520:1:exon

HMPREF0389_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00195
old locus tag: HMPREF0389_01158
so part of: sequence
location: 48768..49238
location: region:48768-49238:1
so has part: feature:48768-49238:1:exon
subclass of: SO_0000010

position:48768:1
position: 48768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49238:1
position: 49238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48768-49238:1:exon

HMPREF0389_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00195
old locus tag: HMPREF0389_01158
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEIRNEIERVIKEHTLDRKRCFECSKMSYHSIIKSIEQKFTRTNNIHWSNMGQGFKRNFLCQIIDVSEDSMWVQQLPKIISSHDDMVYVLFEDVIHFQPKYWIYEMGISELICIIGNVNGLNDFYIVSKKLDWLISENHEDIVSFVGDTLDISCFE
SIO_010081: HMPREF0389_RS00195
subclass of: SO_0000673
so part of: HMPREF0389_RS00195
location: 48768..49238
location: region:48768-49238:1
so has part: feature:48768-49238:1:exon

WP_156775211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48768-49238:1:exon

HMPREF0389_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00200
old locus tag: HMPREF0389_01157
so part of: sequence
location: 49383..49889
location: region:49383-49889:1
so has part: feature:49383-49889:1:exon
subclass of: SO_0000010

position:49383:1
position: 49383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49889:1
position: 49889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49383-49889:1:exon

HMPREF0389_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00200
old locus tag: HMPREF0389_01157
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007592389.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YfbM family protein
translation: MGLIANYQYLSDENLKELKEFSGSEDDLMEQVEEWNEEADILLDIDKMWDVLHFVLTGVDSSEPIENDPLSEAVVGVSVMEGIENFIAYTDKSKVADVLSALEDFDIESAMDEFSMEDCKKADLYPNIWDYEEEEDEIKEEITDYFEAMINFYRKILETNGNVLVTIY
SIO_010081: HMPREF0389_RS00200
subclass of: SO_0000673
so part of: HMPREF0389_RS00200
location: 49383..49889
location: region:49383-49889:1
so has part: feature:49383-49889:1:exon

WP_014261721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49383-49889:1:exon

HMPREF0389_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00205
old locus tag: HMPREF0389_01156
so part of: sequence
location: 50501..50914
location: region:50501-50914:1
so has part: feature:50501-50914:1:exon
subclass of: SO_0000010

position:50501:1
position: 50501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50914:1
position: 50914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50501-50914:1:exon

HMPREF0389_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00205
old locus tag: HMPREF0389_01156
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009757073.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: very short patch repair endonuclease
translation: MSKKTKEQISFNMRRVKNKDSEIELLLRRELRSRNLYYRKNVKTIFGKPDIAFIGKKIAVFVDSEFWHGYNWAEKKKEIKSNQEFWISKIERNMQRDVEVNEHLQSQGWLVLRFWGNDIKKNVTTCADIVESAFRER
SIO_010081: HMPREF0389_RS00205
subclass of: SO_0000673
so part of: HMPREF0389_RS00205
location: 50501..50914
location: region:50501-50914:1
so has part: feature:50501-50914:1:exon

WP_041250888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50501-50914:1:exon

HMPREF0389_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: dcm
locus tag: HMPREF0389_RS00210
old locus tag: HMPREF0389_01155
so part of: sequence
location: 50918..52045
location: region:50918-52045:1
so has part: feature:50918-52045:1:exon
subclass of: SO_0000010

position:50918:1
position: 50918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52045:1
position: 52045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50918-52045:1:exon

HMPREF0389_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: dcm
locus tag: HMPREF0389_RS00210
old locus tag: HMPREF0389_01155
EC number: 2.1.1.37
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009757072.1
GO function: GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA (cytosine-5-)-methyltransferase
translation: MLFTTIDLCAGIGGIRKGFELTGHFKNLVAAEIDRYACLTYQHLYGEDADNDLTSEEFKTALEGLHYDVLLAGFPCQTFSRAGLEEGFNNEQNGVVFNHIAEIIQRTRPRAIFLENVDNLVRHDKGNTFRVIIHTLEELLNYKVIGVTYNDIGELIYNGKDFIRNSRNFGIPQNRPRTYIMAFNRQLYGADTLLGIGNLLPTEKNRYLYEDLNSLLEFRAEPKYYMSSGYFNTLVRHRERERKKGNGFGYRVVNEPGIEHPVANTIMATGGSGKERNLIYDPQEGIAGMTIPPKRTALNNRGIRVMTPREWGKLQGFINYAFLDEEGVDHFSFPSEVSVAQQYKQFGNSVTIPVIETMAEFMVDCFTVLGDIPKK
SIO_010081: HMPREF0389_RS00210
subclass of: SO_0000673
so part of: HMPREF0389_RS00210
location: 50918..52045
location: region:50918-52045:1
so has part: feature:50918-52045:1:exon

WP_014261723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50918-52045:1:exon

HMPREF0389_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00215
old locus tag: HMPREF0389_01154
so part of: sequence
location: 52316..52549
location: region:52316-52549:1
so has part: feature:52316-52549:1:exon
subclass of: SO_0000010

position:52316:1
position: 52316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52549:1
position: 52549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52316-52549:1:exon

HMPREF0389_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00215
old locus tag: HMPREF0389_01154
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009757071.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKNETKRERFVRLAEVRTNKIIDMLKLLGNCSNTVNYEYTDADVKKIFAAIERELKNTKAKYNGSDSVNEERFTLE
SIO_010081: HMPREF0389_RS00215
subclass of: SO_0000673
so part of: HMPREF0389_RS00215
location: 52316..52549
location: region:52316-52549:1
so has part: feature:52316-52549:1:exon

WP_014261724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52316-52549:1:exon

HMPREF0389_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00220
old locus tag: HMPREF0389_01153
so part of: sequence
location: 52568..54499
location: region:52568-54499:1
so has part: feature:52568-54499:1:exon
subclass of: SO_0000010

position:52568:1
position: 52568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54499:1
position: 54499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52568-54499:1:exon

HMPREF0389_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00220
old locus tag: HMPREF0389_01153
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009757070.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTHISWRFPPLSGGTRQGYTNNDIEVFKGQELFDNLTREICQNSLDAHLETTDAPVKVVFEFRQINMAQYDVFSEYGECLKGCRNYWGDEMDAKLSRFVTGAETTLQQETIPVLIASDYHTKGLSGSHSGKLSSSWEALTGSDGISVKSDENSAGSYGIGKNAPFACSSLSMVFYNTLAEDNESAFIGVARLATLLNSDGKPTQRVGKYQNNDEENEIWKPIFDTDTNAFRDCFTRTERGTDVIIVGFTQSKDWVKNITNAVLKNFFVAISEGRLIVELKDSTEHHMINADTLSRLFFDLSNNQEMIATTQLYKAFTTPDCKEFLEVLEPDDVEVYIKSDSSYKRTIANFRATGMLVGTYFKRIFQHYAAVVIVRGQKLGELLKDTEPPRHNKWDYKQIESSDKEKRTLAKRSIQEIDTFVLNLLKDQFEIVTEDTIDAAGIGEYIPDDIDGLGAHSEGEDILKVKIKIGKIITNRTQRGTATQSAVQEEGAEQEGDVRNHTHNPNPMPPKPRPPKPVTPDPDDPNPQPGATPGNGIKTVNTPNLTAQRAFPISCSQGLYKIVIKPAETYENLYVECFAVGEDSRSDILEMESFTYNGKRIKIAGGKAGPVKVEVDTTAMFFVKFVKKEKMKLSVHLTEVVKK
SIO_010081: HMPREF0389_RS00220
subclass of: SO_0000673
so part of: HMPREF0389_RS00220
location: 52568..54499
location: region:52568-54499:1
so has part: feature:52568-54499:1:exon

WP_014261725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52568-54499:1:exon

HMPREF0389_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00225
old locus tag: HMPREF0389_01152
so part of: sequence
location: 54496..55431
location: region:54496-55431:1
so has part: feature:54496-55431:1:exon
subclass of: SO_0000010

position:54496:1
position: 54496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55431:1
position: 55431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54496-55431:1:exon

HMPREF0389_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00225
old locus tag: HMPREF0389_01152
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009757069.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEIKDEFPNPVLALGRDDYIEGCSFCTAFDENEIIVDSENIVIPMKYSLVCNGLQTLIDSGDAVVVISVKSSAASYSKLFKFPVGSTEMPIFVPKFSVVTKMDIIGSVIATHNIDNFRCDGEFNDMYFGGVSFEIRKGDILATEDRRSIYVDDTELEKPISSIFDISRHDNQESDVVPNFEDEKIQIFLKNELYDLYYKFKDFNNGVLRRYAAGVIVYPVLVEAVGYVISHYQNGGESDDGTGYSGKRWFRAIDHKADAKGIDLRSYEGYPTTLANDMLGDIALDALKSFKDTLDSEMNSGETQMIGGVD
SIO_010081: HMPREF0389_RS00225
subclass of: SO_0000673
so part of: HMPREF0389_RS00225
location: 54496..55431
location: region:54496-55431:1
so has part: feature:54496-55431:1:exon

WP_014261726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54496-55431:1:exon

HMPREF0389_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00230
old locus tag: HMPREF0389_01151
so part of: sequence
location: 55431..56234
location: region:55431-56234:1
so has part: feature:55431-56234:1:exon
subclass of: SO_0000010

position:56234:1
position: 56234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55431-56234:1:exon

HMPREF0389_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00230
old locus tag: HMPREF0389_01151
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009757068.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6339 family protein
translation: MLLGYFTEEAYEKLLHEIPQNADNYSSNEDWLPTYFGSSDGYFKTSSVDVGRFKPSYTSGKKDDAQKSQEDLVNTRLIYEAFRNLTPLQASNKYMWTYLCHVIPEYRGYIQDRWMQEERSNTIKNRYFVTTPGSLLNDNALSRLWWYGYLTYDCNGSNHYALTEILFTNQTICTDVMDTFNRMNFDRIRGVLTAIKDFKEELSNNEGITDYFRECKKYLNHYAAVTTLEFLDSDEIHNLAFNYMMKLREEKLNGTFTNAKNKRKKKK
SIO_010081: HMPREF0389_RS00230
subclass of: SO_0000673
so part of: HMPREF0389_RS00230
location: 55431..56234
location: region:55431-56234:1
so has part: feature:55431-56234:1:exon

WP_014261727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55431-56234:1:exon

HMPREF0389_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00235
old locus tag: HMPREF0389_01150
so part of: sequence
location: 56231..56650
location: region:56231-56650:1
so has part: feature:56231-56650:1:exon
subclass of: SO_0000010

position:56231:1
position: 56231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56650:1
position: 56650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56231-56650:1:exon

HMPREF0389_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00235
old locus tag: HMPREF0389_01150
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTHYLDCIWCYSAFYGEQIRISVQLHEEGNSYAAFLLLFNIFELLCKLLKESDDENVVSDIKWMLENALITSEEEVFLNSQDGIRKIRNIMTHRNLYEYYFEDDGIVYSFADFETWDIAYTKYAPRIIEIMYNAIVNKD
SIO_010081: HMPREF0389_RS00235
subclass of: SO_0000673
so part of: HMPREF0389_RS00235
location: 56231..56650
location: region:56231-56650:1
so has part: feature:56231-56650:1:exon

WP_014261728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56231-56650:1:exon

HMPREF0389_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00240
old locus tag: HMPREF0389_01149
so part of: sequence
location: 57495..59636
location: region:57495-59636:1
so has part: feature:57495-59636:1:exon
subclass of: SO_0000010

position:57495:1
position: 57495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59636:1
position: 59636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57495-59636:1:exon

HMPREF0389_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00240
old locus tag: HMPREF0389_01149
inference: COORDINATES: protein motif:HMM:NF021355.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-propeller domain-containing protein
translation: MKKRLVSTMIMVLIASIICCTTAFAYGKKSTDTKQVNIYETMEIQLNKSDDKIRDKIVFTNLDGKVLPYFLNQKSPNTYLILPLYGENEEIKMKINLNPKDYTLKNTKEVFYLDNEQNAKELQTHLSQYYRTMDYGLKDGMLAIEEEAGAATPAKEKRDYSETNHQVEGVEEGHVIKTDGQYIYYISDDSVMITKAEKGKLSIQKTLVLPENVIPMELYVDQKKLIVIGDFYNPNYYDPHIDSVTPYGGTVTLVYDVTNIEQPKKIRELVQQGYYLSSRKNGKVVHVVTQNAPFVSMPMAEDTKSPQRDIGILKEELNGTKAPHNVARYDKIIVFPGNYTSNMVTMTSFDVATNRSAEQISYIGNGEELYLSQNDLVISYTGYPRTEETLAKDSAKKSNIQPKGYPFYWEPYTFLNRFRLQGTKATYIGSNRIKGTLLNQFALDEHDGFLRVAFTSERNGGNGIAVFDSKMNLVSSLNGLARGERIYSVRFMQDRAYLVTFKEVDPFFVIDLKKATAPKVMGYLKLPGYSTYLHPIDQNHVLGFGYSVKQERNRIVNDGVKVAIFDVTNVSKPVVCSEQLIGKQGTYSDLGYTHKALLYHPTKKYLGFPITVATPDLRKSSIGSVDFQGAYFYQISPKYELKKKGQISHVTKELTFGGYNYNISGMVYIDDVIYAISHDKVSSHEDGALRQIDEKYWERLPQKNPTVGSIAVD
SIO_010081: HMPREF0389_RS00240
subclass of: SO_0000673
so part of: HMPREF0389_RS00240
location: 57495..59636
location: region:57495-59636:1
so has part: feature:57495-59636:1:exon

WP_014261729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57495-59636:1:exon

HMPREF0389_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00245
old locus tag: HMPREF0389_01148
so part of: sequence
location: 60010..60483
location: region:60010-60483:1
so has part: feature:60010-60483:1:exon
subclass of: SO_0000010

position:60010:1
position: 60010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60483:1
position: 60483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60010-60483:1:exon

HMPREF0389_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00245
old locus tag: HMPREF0389_01148
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011968086.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: QueT transporter family protein
translation: MKWNVKLLVWNAMIAALYAVLTISLEPISYGAVQFRLSEVMTLLAFANPMFVPGLVLGCVIANLFSPLGAIDVFVGSFATFLAIYPMRYCKNVYWASLLPTIANGIIIGIELTVLYQIPIYMSMASVAAGEFVVVSVIGTQLYRIFVQRKWNQSHAS
SIO_010081: HMPREF0389_RS00245
subclass of: SO_0000673
so part of: HMPREF0389_RS00245
location: 60010..60483
location: region:60010-60483:1
so has part: feature:60010-60483:1:exon

WP_014261730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60010-60483:1:exon

HMPREF0389_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00250
old locus tag: HMPREF0389_01147
so part of: sequence
location: 60636..61136
location: region:60636-61136:1
so has part: feature:60636-61136:1:exon
subclass of: SO_0000010

position:60636:1
position: 60636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61136:1
position: 61136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60636-61136:1:exon

HMPREF0389_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00250
old locus tag: HMPREF0389_01147
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTMLRKKMALIAMLIIGTAFVVTRCSVNRGNSFHKIHAHYDKITSIEIKAPKGTVVQVDNKGLVNQVKKYCKPTDKMSSYREDFEKNTTGTPITISFYQEDKLLFEEKLYRLKESVLDKQEVGKARCIYIQAVPCAVKIDDEWIAINGSDAQVEKYIGELWSENK
SIO_010081: HMPREF0389_RS00250
subclass of: SO_0000673
so part of: HMPREF0389_RS00250
location: 60636..61136
location: region:60636-61136:1
so has part: feature:60636-61136:1:exon

WP_041250726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60636-61136:1:exon

HMPREF0389_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: trpS
locus tag: HMPREF0389_RS00255
old locus tag: HMPREF0389_01146
so part of: sequence
location: 61168..62166
location: region:61168-62166:1
so has part: feature:61168-62166:1:exon
subclass of: SO_0000010

position:61168:1
position: 61168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62166:1
position: 62166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61168-62166:1:exon

HMPREF0389_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: trpS
locus tag: HMPREF0389_RS00255
old locus tag: HMPREF0389_01146
EC number: 6.1.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016729405.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO process: GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan--tRNA ligase
translation: MMEKKRLFSGVQPSGRITLGNYLGALSNWTTLQDEYECIFSIVDMHAITVPQNPKELRENALLLLAQYLAIGIDPQKSTIFIQSHVPEHAELSWVLSTMTYMGELNRMTQYKEKSQKNSDNLNAGLFTYPVLMAADILLYCTDLVPVGADQKQHLELARDLANRFNHRYSDTFPVPEGFFPKVAARVMSLQEPNKKMSKSDANENGFISLLDEHDVIIKKIKRAVTDSVGIVQYNDEQAGIKNLLEIYSKMTGESIESIVAKYGGKGYGDFKQDTAEIVAEGLRPVREKTKELLSDKAYLESVYREGAEKAEAIARKTLRKVHKKIGFLPRG
SIO_010081: HMPREF0389_RS00255
subclass of: SO_0000673
so part of: HMPREF0389_RS00255
location: 61168..62166
location: region:61168-62166:1
so has part: feature:61168-62166:1:exon

WP_156775272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61168-62166:1:exon

HMPREF0389_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: lspA
locus tag: HMPREF0389_RS00260
old locus tag: HMPREF0389_01145
so part of: sequence
location: 62176..62640
location: region:62176-62640:1
so has part: feature:62176-62640:1:exon
subclass of: SO_0000010

position:62176:1
position: 62176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62640:1
position: 62640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62176-62640:1:exon

HMPREF0389_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: lspA
locus tag: HMPREF0389_RS00260
old locus tag: HMPREF0389_01145
EC number: 3.4.23.36
inference: COORDINATES: protein motif:HMM:TIGR00077.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase II
translation: MGYIVLFVVLLIADQGSKYWARTVLYQQSSIQVIPHVLRFSYVENRGAAFGMLQGQKFFFVIMTFLLIGLFFVYLKKVHANKWMTLTATVIIAGAIGNLIDRMLLGYVVDFIDFHIIWRYVFNVADIYVVGGTLLTALQVLLQDEKDKDTSLSE
SIO_010081: HMPREF0389_RS00260
subclass of: SO_0000673
so part of: HMPREF0389_RS00260
location: 62176..62640
location: region:62176-62640:1
so has part: feature:62176-62640:1:exon

WP_014261733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62176-62640:1:exon

HMPREF0389_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00265
old locus tag: HMPREF0389_01144
so part of: sequence
location: 62735..63328
location: region:62735-63328:1
so has part: feature:62735-63328:1:exon
subclass of: SO_0000010

position:62735:1
position: 62735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63328:1
position: 63328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62735-63328:1:exon

HMPREF0389_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00265
old locus tag: HMPREF0389_01144
EC number: 2.1.1.-
inference: COORDINATES: protein motif:HMM:NF018645.2
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MGYITNLNELSLLICEQYMPDVKVAVDITLGNGLDVQKFLPYIQEKLIAIDIQQQAIDVSKERLQKVLSEEEYSKIEFVTDNHVNIDRHVDRVDFVFGNLGYLPNSDHKIMTKSNTTLICLDKALKLLNPNGLLSIISYLGQDRGQEHRSLCAFFESLDSKQYKVIHINPLNQDEMAPTLFLCQKLYDEPSQERGVF
SIO_010081: HMPREF0389_RS00265
subclass of: SO_0000673
so part of: HMPREF0389_RS00265
location: 62735..63328
location: region:62735-63328:1
so has part: feature:62735-63328:1:exon

WP_014261734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62735-63328:1:exon

HMPREF0389_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00270
old locus tag: HMPREF0389_01143
so part of: sequence
location: 63410..64294
location: region:63410-64294:1
so has part: feature:63410-64294:1:exon
subclass of: SO_0000010

position:63410:1
position: 63410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64294:1
position: 64294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63410-64294:1:exon

HMPREF0389_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00270
old locus tag: HMPREF0389_01143
inference: COORDINATES: protein motif:HMM:NF013088.2
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MQPKDNQKVLALMLLLFTCVAWGGSYVSIQICLDAMGPVYLPFFRYLLSAVLLFVVLKGKGMSLRLEASDWVKVGLTALFSITVYFYFENSAIKKIGANEAAILVAMLPIVALIGNRIFLKQKLLRRNVISAVISIVGIYFVIGGVQFGQNKLGYFYIFLSNLSWSAYLINTKPLLKKYDGLVLTFYQCLIGSLAFLPALPMDYFYIDKITTGIILHFLFLALICSAVCTVCYTFAIKHCGVGISALCLNFIPVATFFFSFLILREVMRPIQLIGAFVAISGLMLMKEDQAIDG
SIO_010081: HMPREF0389_RS00270
subclass of: SO_0000673
so part of: HMPREF0389_RS00270
location: 63410..64294
location: region:63410-64294:1
so has part: feature:63410-64294:1:exon

WP_014261735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63410-64294:1:exon

HMPREF0389_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00275
old locus tag: HMPREF0389_01142
so part of: sequence
location: 64531..64824
location: region:64531-64824:1
so has part: feature:64531-64824:1:exon
subclass of: SO_0000010

position:64531:1
position: 64531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64824:1
position: 64824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64531-64824:1:exon

HMPREF0389_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00275
old locus tag: HMPREF0389_01142
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009527002.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIQFSGYGLIIVVLDYFGGIFLLSQLTPYLFKTFKEQYITLLLFHIIITVINFCLAKYLNREEVNHTVFELRLEYAVLATGLLLLPIVIMMGKGIVY
SIO_010081: HMPREF0389_RS00275
subclass of: SO_0000673
so part of: HMPREF0389_RS00275
location: 64531..64824
location: region:64531-64824:1
so has part: feature:64531-64824:1:exon

WP_014261736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64531-64824:1:exon

HMPREF0389_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00280
old locus tag: HMPREF0389_01141
so part of: sequence
location: 64890..65675
location: region:64890-65675:1
so has part: feature:64890-65675:1:exon
subclass of: SO_0000010

position:64890:1
position: 64890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65675:1
position: 65675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64890-65675:1:exon

HMPREF0389_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00280
old locus tag: HMPREF0389_01141
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009083591.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFDLFVFERRENIKTSLDVFSYQEEFTEYREDKDYDSLTGCSDIISRWAKKIFEKFPPMNGEYAPPDEIAYASEESENHLTDYSLGEHGVYCAFSYKVSDEALEYVKSIADEYMVGVYDIQSNDAIFGKGIEILKYRTEHHDDTVCDWDNIEQSIDTLDSTERGTSNRENAFITVWFDSDETNYNYIQCTPNYVSHGLFGRLFQKNKSDHVSGYFFEITENNSLYRTFVEDKDDLKKLMKAWCVERKDIDVGNYEKILDL
SIO_010081: HMPREF0389_RS00280
subclass of: SO_0000673
so part of: HMPREF0389_RS00280
location: 64890..65675
location: region:64890-65675:1
so has part: feature:64890-65675:1:exon

WP_014261737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64890-65675:1:exon

HMPREF0389_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00285
old locus tag: HMPREF0389_01140
so part of: sequence
location: 65925..66098
location: region:65925-66098:1
so has part: feature:65925-66098:1:exon
subclass of: SO_0000010

position:65925:1
position: 65925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66098:1
position: 66098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65925-66098:1:exon

HMPREF0389_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00285
old locus tag: HMPREF0389_01140
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTFKEWIHKFHPECEGDMMEEQLMEEYATWQKTHSDSMCSFCATGEMPESSDLDGIL
SIO_010081: HMPREF0389_RS00285
subclass of: SO_0000673
so part of: HMPREF0389_RS00285
location: 65925..66098
location: region:65925-66098:1
so has part: feature:65925-66098:1:exon

WP_156775212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65925-66098:1:exon

HMPREF0389_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00295
old locus tag: HMPREF0389_01139
so part of: sequence
location: 66507..72800
location: region:66507-72800:1
so has part: feature:66507-72800:1:exon
subclass of: SO_0000010

position:66507:1
position: 66507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72800:1
position: 72800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66507-72800:1:exon

HMPREF0389_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00295
old locus tag: HMPREF0389_01139
inference: COORDINATES: protein motif:HMM:NF012862.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-layer homology domain-containing protein
translation: MRRNYIFSKTMAVLLSGIITVSALPLYSFADTINVSNTFTDVQKGNWEENGIMSLVHKGVISGYPDGTFKPNQITKRGEFVSLLNKIFGLKNSSEIKFTDVPKELWCYDAICVAVGEGYIAGYPDGTFKPNAPITREESAVLLAKILEKKGEKIEGNIVLPKDEISPWAKEAVAFVMSKKLMSGYPDGTFKPTRQITRAESAVLMNQTDEYIKGIFSDKNDATNQKEEPKKENHSNQKDKGDSSGGGSGSIQPKETLSMYHLENNYYVFNVKPEMTKAEIHSLLKKQYPTLKQYYIGKIFKDNTKVFLYLEDGVLNCPSLAEVPEGISGIYVGKDGEFIGYEEGKEKGRVSLFVGEVKLDTPFETTETVLGLKGNEISGGLDLQANTRKIDGLNFHLEKTEKKSMVYQSAIAQSSSVKSEISNLEITNNTFDFGNSTVSAKNAIIITSKVGSGYLKINHNTIKGWGAENNSTFYSNYAIAIKTQTEDGTLTEIKNNEISDYGYNGISVSAGKRASVSIENNNLNNLGQNGIGAALFGKGEEVSIKNNTISRYGSKKIMVKKSFLSSETVESDAHEEGLTVGYIGVVRGVKFNGKYYSNQQKFLQDLSRLNNIEEKESNDKNEGVLNCTPIKLSHDYNFRNPIEEINKSYSRLQDAELIIVKDDDEDLILPNEQIKEKTVKSLRIVGEGSGKVILNQTLSITDDLTIDLPNCNLQNNAKVDKEKVHIIRIRDNDYSNFVIKPEMTTIPLKTVSSLAIQILDIQDKEGKKVAKEQSNLTNNIKVFVNDETSPDFTVNDEQDTVILNKSLLDQILRFATVKIEYQDNKNNVSGVKKSFDVKVENSSTLKAEFEKGAEPSIIESFAPEEGLRIKITEVKNASGESVQPSELNLKDGVSLKISYREAKSQDLEIDGDTITLKKEFLDTVSVPLFALTQDVIISVTDLQQKVLDAKATLKIKVLNHSGGEVTPISTLTFTQGKAPESGMTFKITSLRNAKGEELSKNEIDLENCVDIEPFPVDWKDDSLEKLEDGRIRFNRKYLSIDKEQNTITIKKEYLNKLVVNDKDTEFGTKQIIVKYRDKRVGIDFRSDKFLIHIKKALKPLSNDTSIVSSEYTIQGDKITSGNSSITKNTTVSELMKHIHKGNERQVLRVYDKKYILNGKLDKNHIYDYRKSYENMVSGDYLAVTAEDGIAVKVYEILFEGSANQSLISVKDSNVILNLGATFIEVTEKVTTSEQLKAALEVVQGASLQVLDKQGNSVSEIKDGYQLVAQKENQREERIIKLNYSKKTYRALIIANSDYGNEKLNLVGPKNDKVLMKKVFENQEISSNPFEKITVEENVDKAQFLAKIKEAFEGANSNDVSYLYYSGHGNNIDGVSYICTTDLKENKEEQKQAWISVNELREALDDVPGMKVLIFDSCNAGGFIGKKVDAITTPTPNSSKNAKEFNENIEKVFVKQEEKSIHYLTSNDYKVLTASSEDEYSFEDKKEKVGKFTKVLSQVAGIYGNVVGDTDNDGKVSLEEAYRYLEDNVVYTSHIQAFPRNDSYTLFEVGANAKPISSDTSVQSTKQAGEDELLIIIRGKQRLIQSKIFQITERVTVEEFLSKIVKGHPNQQLRVVKKELQGMIEKKGTDLLEKLDFLEVTAEDGTKANYIITVQKATGSDVLDISSKKDEKEIAYYTIIYNAKLIKSSLKKLTEETTVEEFLSNIVKGDAKQTLSVIDKNKQSKIDSDKLASGDKLLVRAESGKTAEYTIILDKKPLELVFKDNAFKVEHGEGAFGTKIVSDKKELDTNVTVEEFLNLIVNKDKFKSIKLNSGNADEPKKKDEKLEQGDYLLVATGGYPKRYTLMVKKAGTPTLPEEPKPPQEEKNEPDFGEDFAISKNQYGLGRIVSKDTKIVDTMTVQEFLSKMKNKDKFQKVVVKSGWDEKSSDKPLKNGDRLFVEMKSSNSGGLSVTPPPQIYTIVVEKASVEPPQEEIKEPDFGGVYKIGVLNKSEIISGTKELT…
SIO_010081: HMPREF0389_RS00295
subclass of: SO_0000673
so part of: HMPREF0389_RS00295
location: 66507..72800
location: region:66507-72800:1
so has part: feature:66507-72800:1:exon

WP_014261739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66507-72800:1:exon

HMPREF0389_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: hydF
locus tag: HMPREF0389_RS00300
old locus tag: HMPREF0389_01138
so part of: sequence
location: complement(72939..74120)
location: region:72939-74120:-1
so has part: feature:72939-74120:-1:exon
subclass of: SO_0000010

position:72939:-1
position: 72939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74120:-1
position: 74120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72939-74120:-1:exon

HMPREF0389_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: hydF
locus tag: HMPREF0389_RS00300
old locus tag: HMPREF0389_01138
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006874266.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: [FeFe] hydrogenase H-cluster maturation GTPase HydF
translation: MQTTPNANRIHISFFGKTNVGKSSLINAIAHQTVSLVSEQKGTTTDPVKKAIELHPIGPCLLIDTAGFDDNSILGTERIELTKQVVEQTDIAIFLFGDSSFEEERQWITYLHDKNIPTVFVLNKSDIVDSSNLALVIETEFGKKPICVSALHKENIDTLLKELQTISTTLEKEESICGHLVKPLDTVLLVMPQDIQAPKGRLILPQVQTIRDLLDHQCIVISTTFEQYDQALESLNKPPKLIITDSQLFAQVFPKKPEESLLTSFSVLFSRHKGDIEEFIRGSQILDSLNEHSRVLIAEACSHRPLKEDIGRVKLPRLLRKKIHPDLKIDIVSGNDFPNDLSPYDIIIHCGACMFNKKHVMSRVEQAVHSQIPITNYGIAIAKLNGILEDIDY
SIO_010081: HMPREF0389_RS00300
subclass of: SO_0000673
so part of: HMPREF0389_RS00300
location: complement(72939..74120)
location: region:72939-74120:-1
so has part: feature:72939-74120:-1:exon

WP_014261740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72939-74120:-1:exon

HMPREF0389_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: hydG
locus tag: HMPREF0389_RS00305
old locus tag: HMPREF0389_01137
so part of: sequence
location: complement(74138..75562)
location: region:74138-75562:-1
so has part: feature:74138-75562:-1:exon
subclass of: SO_0000010

position:74138:-1
position: 74138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75562:-1
position: 75562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74138-75562:-1:exon

HMPREF0389_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: hydG
locus tag: HMPREF0389_RS00305
old locus tag: HMPREF0389_01137
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006439437.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: [FeFe] hydrogenase H-cluster radical SAM maturase HydG
translation: MTRYNPASSRAEEFINDQEILDTIEYAQKNKDNLELMRKVLEKGKKQQGLTHREAALLLECEDEQILAEMFELAKQIKERIYGRRIVLFAPLYLSNYCVNGCVYCPYHQKNKHIRRKKLTQEEIRKEVIALQDMGHKRLALESGEDPLHSPIEYILESIDTIYNIHHKNGAIRRVNVNIAATSVENYKKLEQAGIGTYILFQETYHKETYEQLHPTGPKHDYAYHTEAMDRAMEGDIDDVGIGVLFGLYKYRYDFVGLIMHAEHLEAKFGVGPHTISVPRIRPADDIDVSEFPEAIVDSLFKKIVALIRISTPYTGMIISTRESASSREEVLEIGVSQISGGSSTSVGGYAEKELLEDNSAQFDTSDKRTLDEIIYWLMNSGYVPSFCTACYRAGRTGDRFMALAKSGQIGNVCQPNSLMTLTEYLLDYASPETKKLGEQLIQKELAHILDANVKRRSEEYILQMEHGSRDFRF
SIO_010081: HMPREF0389_RS00305
subclass of: SO_0000673
so part of: HMPREF0389_RS00305
location: complement(74138..75562)
location: region:74138-75562:-1
so has part: feature:74138-75562:-1:exon

WP_014261741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74138-75562:-1:exon

HMPREF0389_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: hydE
locus tag: HMPREF0389_RS00310
old locus tag: HMPREF0389_01136
so part of: sequence
location: complement(75641..76636)
location: region:75641-76636:-1
so has part: feature:75641-76636:-1:exon
subclass of: SO_0000010

position:75641:-1
position: 75641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76636:-1
position: 76636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75641-76636:-1:exon

HMPREF0389_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: hydE
locus tag: HMPREF0389_RS00310
old locus tag: HMPREF0389_01136
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009083625.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: [FeFe] hydrogenase H-cluster radical SAM maturase HydE
translation: MNTHPAIQKLIDDISVENILTLLELEDFSPVFDYADRINHFHHGKYIDIRAIVEFSNYCRRKCKYCGLNATNSSAKRYRMTEEEVIQTAIHARKAGYLTAVLQSGEDAYFTVEKLGFIVKEIKKQVDMFITLSCGEKSFEELAYLKDCGADRYLLKHETADTSLYGNLHPCGTLAARTQCLRDIKKLGYDAGSGFMIGLPTQTLHTIAEDLFLLYDLQCDMAGIGPFIPHPETELRDCSAGNTELTKKAVAIARILLPKANLPATTSLGVLDTKQKNNIFSCGANVIMRKVTPPEYVQLYDIYPTAIKVNNIEEERQELETTIRSLGKIPR
SIO_010081: HMPREF0389_RS00310
subclass of: SO_0000673
so part of: HMPREF0389_RS00310
location: complement(75641..76636)
location: region:75641-76636:-1
so has part: feature:75641-76636:-1:exon

WP_014261742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75641-76636:-1:exon

HMPREF0389_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00315
old locus tag: HMPREF0389_01135
so part of: sequence
location: complement(76641..76895)
location: region:76641-76895:-1
so has part: feature:76641-76895:-1:exon
subclass of: SO_0000010

position:76641:-1
position: 76641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76895:-1
position: 76895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76641-76895:-1:exon

HMPREF0389_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00315
old locus tag: HMPREF0389_01135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008428699.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-only hydrogenase system regulator
translation: MEENRLALIGIIVEDLTKTNALNDILHEYGSYVVGRMGIPYRTRGVSLISVIVDAPTNVISSLSGKLGMLEGVNVKTSYTKSKE
SIO_010081: HMPREF0389_RS00315
subclass of: SO_0000673
so part of: HMPREF0389_RS00315
location: complement(76641..76895)
location: region:76641-76895:-1
so has part: feature:76641-76895:-1:exon

WP_014261743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76641-76895:-1:exon

HMPREF0389_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00320
old locus tag: HMPREF0389_01134
so part of: sequence
location: complement(77594..79240)
location: region:77594-79240:-1
so has part: feature:77594-79240:-1:exon
subclass of: SO_0000010

position:77594:-1
position: 77594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79240:-1
position: 79240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77594-79240:-1:exon

HMPREF0389_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00320
old locus tag: HMPREF0389_01134
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008976347.1
GO function: GO:0015297 - antiporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Na+/H+ antiporter NhaC family protein
translation: MICFNAKNSRMFMVLFSLFILFPSMVFAEDKQVPPALYATFWALIPPIVAIALALLTKEVYSSLFIGIFIGGLFYANFSIEGAMNHILTEGIINVLSDKYNVGILVFLVVLGAIVNLMNATGGSSSFGEWTEKRISSRKGAQFLTIILGLIVFIDDYFNCLTVGSVMKPISDKYKLSRAKLAYLIDSTAAPICIIAPISSWAAAVTGFVPGADGFQIFIQAIPYNFYAFLTIFMMFAITWMGFDFGPMKTHEENAKNGDIYTTPDRPYENIASHEISGKGNVNDLVIPVLILIFFCAAGMLYSGGFFTGVDFISAFSGSDASFGLSLGSMIALVLIILFYIARRVLSFHECMECIPEGFKSMVSAILILTFAWTLKSMTDSLGATVFVSEVMKNTAGHFMNLVPALVFVVGCALAFATGTSWGTFGILIPIVVSVFAGHDKTMMIISISACMAGAVCGDHCSPISDTTIMSSAGAQCNHINHVNTQMPYAMTVAVVSFVNYVIAGFVKSAVIMLPLSFVLMFITLVVLKKVTATKSVPVNVLNPSNEC
SIO_010081: HMPREF0389_RS00320
subclass of: SO_0000673
so part of: HMPREF0389_RS00320
location: complement(77594..79240)
location: region:77594-79240:-1
so has part: feature:77594-79240:-1:exon

WP_014261744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77594-79240:-1:exon

HMPREF0389_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00325
old locus tag: HMPREF0389_01133
so part of: sequence
location: 79791..80312
location: region:79791-80312:1
so has part: feature:79791-80312:1:exon
subclass of: SO_0000010

position:79791:1
position: 79791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80312:1
position: 80312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79791-80312:1:exon

HMPREF0389_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00325
old locus tag: HMPREF0389_01133
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRKIYDDIIYLLFFCGLVFGGGVKLVLYGLGSLFGNFDIELQSRFFFHEGFLVFQQDAFWVVYALILIPLVIIRVFQSAFEDKVESVNRTVPYGKLSDGLRTVTWIVSCFLVDSILKFFTPFVVFLVARDMDSIKRLLLFDDGLFSIYIKLWAILLPIVLFVILPRYRKSCQ
SIO_010081: HMPREF0389_RS00325
subclass of: SO_0000673
so part of: HMPREF0389_RS00325
location: 79791..80312
location: region:79791-80312:1
so has part: feature:79791-80312:1:exon

WP_014261745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79791-80312:1:exon

HMPREF0389_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00330
old locus tag: HMPREF0389_01132
so part of: sequence
location: 80664..81344
location: region:80664-81344:1
so has part: feature:80664-81344:1:exon
subclass of: SO_0000010

position:80664:1
position: 80664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81344:1
position: 81344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80664-81344:1:exon

HMPREF0389_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00330
old locus tag: HMPREF0389_01132
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005999576.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNFEEMSPKEIITCAMIEIAECMKHDGFCYNKNKLEIRKEFDFMVSISPQMNRNNRTGIATQALLQCSIFDKEGKECFWSKGLAVSNKKQDSFCWFDFYGIESYEQSVKEIKEIISQHFLPFIRRMEDNPMAVVQEVAEKGFCVFSDEPVYDARFVVPTAFLLRYGTHEQLTLSFQNYIDRHQLPYVKTNMQKAVALLKENKEVKNNGEKYYAEFVVKHDIELKF
SIO_010081: HMPREF0389_RS00330
subclass of: SO_0000673
so part of: HMPREF0389_RS00330
location: 80664..81344
location: region:80664-81344:1
so has part: feature:80664-81344:1:exon

WP_014261746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80664-81344:1:exon

HMPREF0389_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00335
old locus tag: HMPREF0389_01131
so part of: sequence
location: 81696..83300
location: region:81696-83300:1
so has part: feature:81696-83300:1:exon
subclass of: SO_0000010

position:81696:1
position: 81696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83300:1
position: 83300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81696-83300:1:exon

HMPREF0389_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00335
old locus tag: HMPREF0389_01131
EC number: 6.3.4.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011987231.1
GO function: GO:0003883 - CTP synthase activity [Evidence IEA]
GO process: GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CTP synthase
translation: MMAKYVFVTGGVVSSLGKGITAASLGRLLKARGLKVSIQKFDPYLNFDPGTMSPYQHGEVFVTEDGGETDLDLGHYERFIDENLSINSSVTSGKIYYSVISKERKGEYLGGTVQVIPHITNEIKERIQRVAKHNELDVVITEIGGTVGDIESQPFLEAIRQMKYEVGEENVCYIHVTLVPYLRRAGELKTKPTQHSVKELRSIGIQPDIVVCRTEEELTEDMKDKIALFCNLKPNHVVQNMDAETLYSVPLMLQKEKLDRLVIDRLGLDAKEADLTEWIAMVEREKSLTEECTIALVGKYVELKDAYLSVVEALYHAGLANGIKVNVDWINAEEIESYTDRQIQELFQKTDGILVPGGFGDRGIEGKILAAKYARENNIPYFGICLGMQLAVIEFARHVGGIEDAHSAELSITTNPVINLMPEQEDIEEKGGTMRLGVYPCKVLEGTKAMEAYGSNLIYERHRHRYEFNNIYRQQLENKGLVISGVSPDDRLVEIVEIPTHKWYVACQFHPEFKSRPTKSHPLFHDFIQATMDK
SIO_010081: HMPREF0389_RS00335
subclass of: SO_0000673
so part of: HMPREF0389_RS00335
location: 81696..83300
location: region:81696-83300:1
so has part: feature:81696-83300:1:exon

WP_278214652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81696-83300:1:exon

HMPREF0389_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00340
old locus tag: HMPREF0389_01130
so part of: sequence
location: 83493..84989
location: region:83493-84989:1
so has part: feature:83493-84989:1:exon
subclass of: SO_0000010

position:83493:1
position: 83493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84989:1
position: 84989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83493-84989:1:exon

HMPREF0389_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00340
old locus tag: HMPREF0389_01130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013380841.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S dicluster domain-containing protein
translation: MNQLYTDIIQIRQNVFAEITRIAYSDEDLIEALENAPMKILPGEVSERRQSIFKERAIVGERLRLTLGLPVRKASEFRRLSEGIKAIDETERVYEAPLVNVIPFACNACPTKALEVTSTCRQCMAHPCIQVCPVGAITMGETQTHIDKEKCIKCGKCKEACPYNAIIQYDRPCAEACGVNAIGSDEYGRALIDHDKCVSCGQCMAHCPFGAIADKAQIYQLVKSIRNKKQKHIAIVAPAFVSQFGDKITPAQVFEGIKMLGFDDVVEVGLGADIATINEAKEFLHVVPNELPYLATSCCPAWVSMVNKMFPEVVPQVSDALSPMKFTVQHIRKTDPDVKIIFVGPCVAKKLEALGEEMKSYVDFVITFEELMGMFVGKGIDLAAIETDNVINDSSAIGRGFAQAGGVAGAVQAYIKEIEPERELMLEAADGLHDCVKLARLAKAGKKNGYLIEGMGCPGGCIAGAGTLAPYNKAQKALNNFMKAAEYQSPTQNPLLDK
SIO_010081: HMPREF0389_RS00340
subclass of: SO_0000673
so part of: HMPREF0389_RS00340
location: 83493..84989
location: region:83493-84989:1
so has part: feature:83493-84989:1:exon

WP_014261748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83493-84989:1:exon

HMPREF0389_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00345
old locus tag: HMPREF0389_01129
so part of: sequence
location: 85150..85800
location: region:85150-85800:1
so has part: feature:85150-85800:1:exon
subclass of: SO_0000010

position:85150:1
position: 85150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85800:1
position: 85800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85150-85800:1:exon

HMPREF0389_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00345
old locus tag: HMPREF0389_01129
EC number: 3.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009250108.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD family hydrolase
translation: MKKAYIFDLDGTLVDSIPTISHFANQALIQYGCKPVEEDLYKLFLGEGSVKLVHRLLDSQGKDIEENFEKVHTMYNKTYDEDYLYLCKPYEGITELIDELKRRKYIIAVLSNKPHSTTVKIIEALFGKGTFTKIYGQREGIPLKPDAQALHSILDELELSKEECVYIGDTKTDMLTGKNANVFTVGVLWGFRDRDELEQYQADVIISSPEELLTIE
SIO_010081: HMPREF0389_RS00345
subclass of: SO_0000673
so part of: HMPREF0389_RS00345
location: 85150..85800
location: region:85150-85800:1
so has part: feature:85150-85800:1:exon

WP_041250892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85150-85800:1:exon

HMPREF0389_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00350
old locus tag: HMPREF0389_01128
so part of: sequence
location: 85865..86536
location: region:85865-86536:1
so has part: feature:85865-86536:1:exon
subclass of: SO_0000010

position:85865:1
position: 85865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86536:1
position: 86536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85865-86536:1:exon

HMPREF0389_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00350
old locus tag: HMPREF0389_01128
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004067037.1
GO component: GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trimeric intracellular cation channel family protein
translation: MFLFVLEIMGSIAFAISGAMVAIKKEFDLLGVIVLGITTSIGGGIIRDVILGITPPKTFQNSIYAKVSIVSSVIVFLFVYINRSNMMKREIKVLYEKLLLISDTIGLGVFTVVGINIAYSQLEEPNTFLFIFVGVLTGVGGGLCRDMMAGNKPYIFVKHIYASASIAGALTTVYLWEVTNKNIAMMCGIAVVSIIRFLAAHFEWNLPKIKRTEENNNRMMIQK
SIO_010081: HMPREF0389_RS00350
subclass of: SO_0000673
so part of: HMPREF0389_RS00350
location: 85865..86536
location: region:85865-86536:1
so has part: feature:85865-86536:1:exon

WP_014261750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85865-86536:1:exon

HMPREF0389_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00355
old locus tag: HMPREF0389_01127
so part of: sequence
location: complement(86892..88253)
location: region:86892-88253:-1
so has part: feature:86892-88253:-1:exon
subclass of: SO_0000010

position:86892:-1
position: 86892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88253:-1
position: 88253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86892-88253:-1:exon

HMPREF0389_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00355
old locus tag: HMPREF0389_01127
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008396157.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: APC family permease
translation: MSENKFKKELGLFQVIAMAAGGMIAAWMVEIKLWFELSGVGSSVALITCAILVLSLCLIYAELTGMLPYAGGANIWISNSFGWNSGWLCFWCVMLLYIMAMPTVSYGIASMLGYLFPVTFLQVKIIAAVILLVWFILTNFEIKFLARIQNVLFWSTLVISILASITFIGSEQWSINTLKPIFPKGFSGYSAAVGLLVMKFVGFDLIPQLSEETNFPRKRLVVAFIGSLFLTVLIYCLAVIGVGGIVSQQWVAETDVVDPRVADIIGKHWLGVVLVVMGTGTCLTTLSGFWLSASRTLYGAAKQRQFPIVFAKINKNGQPHIANILVGVTSVYFTVFAPETWVNYIYTIYGIAAGLVYLMVVLSFLKLRKKQPNWERPFYVKHANIVATVGVLFCIWILIASVMAMEVGAWLTLLGYAVIGIGFWLYARYKQKSEPDVWKPFIINPENTPINSK
SIO_010081: HMPREF0389_RS00355
subclass of: SO_0000673
so part of: HMPREF0389_RS00355
location: complement(86892..88253)
location: region:86892-88253:-1
so has part: feature:86892-88253:-1:exon

WP_014261751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86892-88253:-1:exon

HMPREF0389_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00360
old locus tag: HMPREF0389_01126
so part of: sequence
location: complement(88786..89484)
location: region:88786-89484:-1
so has part: feature:88786-89484:-1:exon
subclass of: SO_0000010

position:88786:-1
position: 88786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89484:-1
position: 89484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88786-89484:-1:exon

HMPREF0389_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00360
old locus tag: HMPREF0389_01126
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008396158.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine hydrolase
translation: MKLNRKFLSFYYDGVEEFPDYVIEPKKTMLLIVDLQNEFCLRDFGEALGFKEAGDWERWEPHYDRLEKVVIPNSRKILDFFRENGLPVSFGRIACLREDGEDRSPVQKTEGWNGMLLHVDSYAAEMVKELTPQKNEIVVNKTTDSVTTGTNYLQLLQNMGITTVVVCGIVTDQCVASTVRGLADAGYQVITIDDACAAPDMQLHDTELKIMNIIYTYVMEAKDIIKLIKEKL
SIO_010081: HMPREF0389_RS00360
subclass of: SO_0000673
so part of: HMPREF0389_RS00360
location: complement(88786..89484)
location: region:88786-89484:-1
so has part: feature:88786-89484:-1:exon

WP_014261752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88786-89484:-1:exon

HMPREF0389_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00365
old locus tag: HMPREF0389_01671
so part of: sequence
location: 90001..90465
location: region:90001-90465:1
so has part: feature:90001-90465:1:exon
subclass of: SO_0000010

position:90001:1
position: 90001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90465:1
position: 90465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90001-90465:1:exon

HMPREF0389_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00365
old locus tag: HMPREF0389_01671
inference: COORDINATES: protein motif:HMM:NF033563.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MFSFITKLSSVICLYWIYTKKASIVNETLKNTLNRLKEPQKIFRSITSDNGLEFAKLCELEKTYIGNIYYCHPNNPQERGTNEKHNSLIRRFLPKGKSLNDYEEEHYIKIMNWMNNLPRKILNYRTPIEVFIEELNNLGLLDDNEELVQFDIAI
SIO_010081: HMPREF0389_RS00365
subclass of: SO_0000673
so part of: HMPREF0389_RS00365
location: 90001..90465
location: region:90001-90465:1
so has part: feature:90001-90465:1:exon

WP_014261753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90001-90465:1:exon

HMPREF0389_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: radC
locus tag: HMPREF0389_RS00370
old locus tag: HMPREF0389_00558
so part of: sequence
location: 90706..91389
location: region:90706-91389:1
so has part: feature:90706-91389:1:exon
subclass of: SO_0000010

position:90706:1
position: 90706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91389:1
position: 91389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90706-91389:1:exon

HMPREF0389_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: radC
locus tag: HMPREF0389_RS00370
old locus tag: HMPREF0389_00558
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014312302.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RadC
translation: MSDLRMRDISLDEKPREKMMKLGVSALSNVELLAIILDTGSSDKSVLDLSQEVLSLSKGLSGIRSLSINDFLSIKGIGPAKTGRILASLELSSRIAKQESEDLFQIDSAVSVANLFMEELRYLKREVFKVLFLDTKNKIICDRDISVGSLNASIVHPREVFKEALLYSSNKIFLIHNHPSGDTEPSREDILITERLKKAGELLGVEVLDHIIIGNGKYSSLRECGYL
SIO_010081: HMPREF0389_RS00370
subclass of: SO_0000673
so part of: HMPREF0389_RS00370
location: 90706..91389
location: region:90706-91389:1
so has part: feature:90706-91389:1:exon

WP_014261754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90706-91389:1:exon

HMPREF0389_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: mreC
locus tag: HMPREF0389_RS00375
old locus tag: HMPREF0389_00557
so part of: sequence
location: 91465..92253
location: region:91465-92253:1
so has part: feature:91465-92253:1:exon
subclass of: SO_0000010

position:91465:1
position: 91465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92253:1
position: 92253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91465-92253:1:exon

HMPREF0389_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: mreC
locus tag: HMPREF0389_RS00375
old locus tag: HMPREF0389_00557
inference: COORDINATES: protein motif:HMM:TIGR00219.1
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreC
translation: MITLFLLNSINGNFGSENRVLSFYATSSKLITSSSNKIKFVLGSKGKSSEEEIELLKAKNEELKSQLIENMITKSDLEELKNLKSSLNYVSNNENSEYISTSIVYKNDGNFFTSFVIDAGKNFGVQKDSIVIGQNGLVGIIFEVNEKYSKGMSILDSDISVSFQALRNKEVAGIASQNIIMNINDDFSGYLKGYLFDKEASVFTGDILVTSGLGLYPAGIQIGEVEGVVEDKSNLLQYIKIKPYVNFKTIDKVIVINPRVLH
SIO_010081: HMPREF0389_RS00375
subclass of: SO_0000673
so part of: HMPREF0389_RS00375
location: 91465..92253
location: region:91465-92253:1
so has part: feature:91465-92253:1:exon

WP_169308497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91465-92253:1:exon

HMPREF0389_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: mreD
locus tag: HMPREF0389_RS00380
old locus tag: HMPREF0389_00556
so part of: sequence
location: 92268..92759
location: region:92268-92759:1
so has part: feature:92268-92759:1:exon
subclass of: SO_0000010

position:92268:1
position: 92268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92759:1
position: 92759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92268-92759:1:exon

HMPREF0389_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: mreD
locus tag: HMPREF0389_RS00380
old locus tag: HMPREF0389_00556
inference: COORDINATES: protein motif:HMM:NF016019.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreD
translation: MKNVIYILFGFFILLLELILFNRVSLFVISANILIIYIATLSIFTSLDRVLFVSLFLGLGKDFVFERIFGLNAMILIILGILFGNLKGSIYKEKWTIPIFLSGISSVIYMLIYSLFYRMYLGRAYSFLYSIKMLGAFLFVEIVVSLVIYYPLRKIVQIVEDRW
SIO_010081: HMPREF0389_RS00380
subclass of: SO_0000673
so part of: HMPREF0389_RS00380
location: 92268..92759
location: region:92268-92759:1
so has part: feature:92268-92759:1:exon

WP_014261756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92268-92759:1:exon

HMPREF0389_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00385
old locus tag: HMPREF0389_00555
so part of: sequence
location: 92764..95580
location: region:92764-95580:1
so has part: feature:92764-95580:1:exon
subclass of: SO_0000010

position:92764:1
position: 92764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95580:1
position: 95580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92764-95580:1:exon

HMPREF0389_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00385
old locus tag: HMPREF0389_00555
inference: COORDINATES: protein motif:HMM:NF013100.2
GO function: GO:0008658 - penicillin binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-binding transpeptidase domain-containing protein
translation: MKYNMQSRFYAFFVAVVVMFSLIFLKITYLTIFSGDLFSRREASFVYKKIEVKAPRGEIRDRYGRLLAGNRPSFNVQLSRNNSLSQEEQNNAILKIISILKQNNEKIVDEFPIKIDANNYYYFTYDEELRKWKEKNNIDPNASAKESFTLIANLLVEQGVIRIDKDTTSKEIQQKMIAAGYYPPISIQQEMKFSHQVKKEEWIQKNFPKEYKQYLNKPAKEIFQLLREKNKISSSMDDRTARDMLNVLNILKMQSYQYQPVGISFDIKNNTVIQLEEASQDIPMVSVVVEPVRYYPHGNFASHILGYLGKISDNEIQEYVRDKKYNPSDIIGKTGIEKTFEEQLRGKAGYQEVQVDSRNRMVGNLGFQNAEPGDTIYLTLDYKLQKTVEDTLKKTLGCIQNGSDYQSDWGNIRMRENKKVFYKAQSGATIVMDVNTGKILAMASYPDYDPNKFVHGISQEDYELLMPKNLNDPMSPKPLFNIATMMSVQPGSTFKMITGLAALENGLSPYYRIQDKGSIKIGNHSFGCWIWNSSGHSQTHGMENLMDAIQDSCNYYFYCLSVGYDYSVDKPLPISMNSQKILDYATKFGLNEKTGIEIEETKGSVPTVGMEREKKVIALKNFLKEFLADKFEDIDSNSGEYITRINTIISWADENPSRGELIRRLREIKVKEKELNNVTDRIKYDYFISMGGWKEGDAFNLAIGQGAHSYTPLQLTRYVASIANKGNLNKVSLIDKRENYEKTDIIRHELETEVIQLKNNKNLEYLVQGMKNASDEGTSKNTFNRFPIMVASKTGTAQRAGKIPTVDEKKYYLSHLSSYGVNYSDVMRVAEELEKNSKTKLQDYQYIVQAILKLNKNLKKADLDQYKDSYDEFAWFVSFAPAEKPEIAVISVIVQGGHGGYAAPMARDIYAQYFELTPYGTKPQETIQKKIQFLDELN
SIO_010081: HMPREF0389_RS00385
subclass of: SO_0000673
so part of: HMPREF0389_RS00385
location: 92764..95580
location: region:92764-95580:1
so has part: feature:92764-95580:1:exon

WP_014261757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92764-95580:1:exon

HMPREF0389_RS08660
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: minC
locus tag: HMPREF0389_RS08660
old locus tag: HMPREF0389_00554
so part of: sequence
location: 95679..96395
location: region:95679-96395:1
so has part: feature:95679-96395:1:exon
subclass of: SO_0000010

position:95679:1
position: 95679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96395:1
position: 96395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95679-96395:1:exon

HMPREF0389_RS08660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: minC
locus tag: HMPREF0389_RS08660
old locus tag: HMPREF0389_00554
inference: COORDINATES: protein motif:HMM:TIGR01222.1
GO function: GO:0004857 - enzyme inhibitor activity [Evidence IEA]
GO process: GO:0000918 - division septum site selection [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septum site-determining protein MinC
translation: MQREKVEIKGSKDGFYAVFEPGLTLVHAISLLQEKLQQDHDFFENSYFTHLTSDTLSENDKLIIARFMEEHYGIRFDKSTFHTEEDNTKKDETLEEEINRRVQEILKTQTKNTTFNLNKNAIVDDKNQMKTFFVYETLRSGGDIQFDGHVVVIGDVNPGGRVTASGNIIILGYLRGIAHAGAKGDKNCFVVAERLAPIQLRIANAIAIASENNKLIEEPLIAKILNDTIVIESVLSHR
SIO_010081: HMPREF0389_RS08660
subclass of: SO_0000673
so part of: HMPREF0389_RS08660
location: 95679..96395
location: region:95679-96395:1
so has part: feature:95679-96395:1:exon

WP_014261758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95679-96395:1:exon

HMPREF0389_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: minD
locus tag: HMPREF0389_RS00395
old locus tag: HMPREF0389_00553
so part of: sequence
location: 96414..97208
location: region:96414-97208:1
so has part: feature:96414-97208:1:exon
subclass of: SO_0000010

position:96414:1
position: 96414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97208:1
position: 97208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96414-97208:1:exon

HMPREF0389_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: minD
locus tag: HMPREF0389_RS00395
old locus tag: HMPREF0389_00553
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006440826.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0000918 - division septum site selection [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septum site-determining protein MinD
translation: MAEVIVITSGKGGVGKTTTTANLGTSLSLNGNKVVIIDADIGLRNLDVVMGLENRIVYDLVDVIEERCKLKQAMIKDKRFENLFLIPAAQTRDKDAVNPEQMKKICDELREEFDYILVDCPAGIENGFKNAIAGADRALIVTTPEVSAVRDADRIIGLLDANNISDHRLVVNRFKPNMVERGDMMDIEDILEILAIDLIGVVPEDDSIVVSTNTGEPAANDQASVAGKAYRNIAKRVQGEEVEFLTFSTNDTFLTRLKKLFTGK
SIO_010081: HMPREF0389_RS00395
subclass of: SO_0000673
so part of: HMPREF0389_RS00395
location: 96414..97208
location: region:96414-97208:1
so has part: feature:96414-97208:1:exon

WP_014261759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96414-97208:1:exon

HMPREF0389_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: minE
locus tag: HMPREF0389_RS00400
old locus tag: HMPREF0389_00552
so part of: sequence
location: 97220..97489
location: region:97220-97489:1
so has part: feature:97220-97489:1:exon
subclass of: SO_0000010

position:97220:1
position: 97220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97489:1
position: 97489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97220-97489:1:exon

HMPREF0389_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: minE
locus tag: HMPREF0389_RS00400
old locus tag: HMPREF0389_00552
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013361601.1
GO process: GO:0000910 - cytokinesis [Evidence IEA]; GO:0000918 - division septum site selection [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division topological specificity factor MinE
translation: MGVFSFFRTEKKSKNIAKDRLKLVLIHDKSGGYSPQILEKLQAEILSVITNYLEVDEEQVEIKIIKTKKNTEDDMVSSLVANVPIKKIK
SIO_010081: HMPREF0389_RS00400
subclass of: SO_0000673
so part of: HMPREF0389_RS00400
location: 97220..97489
location: region:97220-97489:1
so has part: feature:97220-97489:1:exon

WP_014261760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97220-97489:1:exon

HMPREF0389_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00405
old locus tag: HMPREF0389_00551
so part of: sequence
location: 97524..98663
location: region:97524-98663:1
so has part: feature:97524-98663:1:exon
subclass of: SO_0000010

position:97524:1
position: 97524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98663:1
position: 98663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97524-98663:1:exon

HMPREF0389_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00405
old locus tag: HMPREF0389_00551
EC number: 2.4.1.129
inference: COORDINATES: protein motif:HMM:NF013279.2
GO function: GO:0008955 - peptidoglycan glycosyltransferase activity [Evidence IEA]
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FtsW/RodA/SpoVE family cell cycle protein
translation: MNIKERTKNFEYGLTITVVLLFLIGIVLLMSATHYSEYKALGDYKKVIIQTITFLIGIGILCFNNIFDYTRVRKYCKKIYVFCIFLLLIVWIPKIGSPQFGAHSWVNIFGVFNLQTSEIVKPLFILCYATYLEDKKGHIQDFGDLGKAILFAVPIVGLVLIQPDLGGAIVFLSIMFGMLFISGMDVKLILYAGAIFVLCFPLVYKFGLRPHQVERLDAYFTLLFHPSNLSEIYKNNLQVAQSMTAIGSGGALGKGWLRGTYSQYGFIFVSESDFIFSVAGEEFGFVGMSIIICLYIYFLLRLLTISILSKDFYGKLIGIGVFSLFFYQVVQNIGMTIGIIPVTGLPLPFVSYGGSSMISSMMCVALSLNVAKNKRKFDI
SIO_010081: HMPREF0389_RS00405
subclass of: SO_0000673
so part of: HMPREF0389_RS00405
location: 97524..98663
location: region:97524-98663:1
so has part: feature:97524-98663:1:exon

WP_014261761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97524-98663:1:exon

HMPREF0389_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00410
old locus tag: HMPREF0389_00550
so part of: sequence
location: 98806..99069
location: region:98806-99069:1
so has part: feature:98806-99069:1:exon
subclass of: SO_0000010

position:98806:1
position: 98806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99069:1
position: 99069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98806-99069:1:exon

HMPREF0389_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00410
old locus tag: HMPREF0389_00550
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDTFVSKEGMVCFGFKDVEEKLAEEWKGKLGESFIPLTFISVGQEALSYGTGHNFVINTMMVKTRVDELKIDMSKMEKDIKDALDIR
SIO_010081: HMPREF0389_RS00410
subclass of: SO_0000673
so part of: HMPREF0389_RS00410
location: 98806..99069
location: region:98806-99069:1
so has part: feature:98806-99069:1:exon

WP_156775213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98806-99069:1:exon

HMPREF0389_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00415
old locus tag: HMPREF0389_00549
so part of: sequence
location: 99550..99981
location: region:99550-99981:1
so has part: feature:99550-99981:1:exon
subclass of: SO_0000010

position:99550:1
position: 99550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99981:1
position: 99981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99550-99981:1:exon

HMPREF0389_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00415
old locus tag: HMPREF0389_00549
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004604477.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flavodoxin
translation: MAKISLVYWSGTGNTQAMADYVVEGVKSAGAEVDVFEVTEANADDVLKSDVILLGCPSMGSEVLEEESMEPFMEEIEGGLSGKKVGLFGSYGWGDGQWMRDWQERVEGAGASMICDGIIVNGEPSDDSVIDELKSMGSNAALA
SIO_010081: HMPREF0389_RS00415
subclass of: SO_0000673
so part of: HMPREF0389_RS00415
location: 99550..99981
location: region:99550-99981:1
so has part: feature:99550-99981:1:exon

WP_014261763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99550-99981:1:exon

HMPREF0389_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00420
old locus tag: HMPREF0389_00548
so part of: sequence
location: 99986..100630
location: region:99986-100630:1
so has part: feature:99986-100630:1:exon
subclass of: SO_0000010

position:99986:1
position: 99986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100630:1
position: 100630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99986-100630:1:exon

HMPREF0389_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00420
old locus tag: HMPREF0389_00548
inference: COORDINATES: protein motif:HMM:NF024084.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3793 family protein
translation: MMKSNLFDFVQCMRQMEDYEYLLSLLAHHCGPTIERVKVSSLLNIRNSKNRLLSEVWENRKEELLQFFGVSSFSLKKDDSGEIVLIYHEDLLKEQLCKKEHIEFLSRFGYQNDWDYLQYLEFLKKRYTNLCPHEIGVFLGYPIYDVMQFISCPNKECRFVGYWKVYENEEVAKEIFRSYDEAKQISCLKTVEKIFPESALKRKIYKSLMNSTLS
SIO_010081: HMPREF0389_RS00420
subclass of: SO_0000673
so part of: HMPREF0389_RS00420
location: 99986..100630
location: region:99986-100630:1
so has part: feature:99986-100630:1:exon

WP_014261764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99986-100630:1:exon

misc_binding
type: Miscellaneous Binding Site
subclass of: SO_0000409
RO_0002162: 546269
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00230
inference: COORDINATES: profile:INFERNAL:1.1.4
note: T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: tRNA
so part of: sequence
location: 101180..101392
location: region:101180-101392:1
so has part: feature:101180-101392:1:region

position:101180:1
position: 101180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101392:1
position: 101392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101180-101392:1:region

HMPREF0389_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: pheS
locus tag: HMPREF0389_RS00425
old locus tag: HMPREF0389_00547
so part of: sequence
location: 101508..102527
location: region:101508-102527:1
so has part: feature:101508-102527:1:exon
subclass of: SO_0000010

position:101508:1
position: 101508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102527:1
position: 102527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101508-102527:1:exon

HMPREF0389_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: pheS
locus tag: HMPREF0389_RS00425
old locus tag: HMPREF0389_00547
EC number: 6.1.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003436795.1
GO component: GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylalanine--tRNA ligase subunit alpha
translation: MKERLEAIRKNAQLAIEQAKDVNLLEQVRVQFLGKKQELASLLKEMGKLSPEERPTMGKIVNEVRDEIETAIREKKEHLENIALEQKLNREMIDVTIPVKTNFVGKPHPITKVINEIETIFMNMGFSIKEGPEVETVENNFDKLNAPKNHPSRDISDTFYISDTLLLRTQTSPVQIRTMLEEGLPIRMISPGRCFRSDTPDATHSPMFHQVEGLVIGKNITFANLKHTLEEFAIKFFGEDTKTKFRPHNFPFTEPSAEVDVSCFKCHGEGCSICKGEGFIEILGAGMVHPNVLENCGIDSDVYSGFAFGLGVERVAMLKYEIDDIRLMYENDMRFLEQF
SIO_010081: HMPREF0389_RS00425
subclass of: SO_0000673
so part of: HMPREF0389_RS00425
location: 101508..102527
location: region:101508-102527:1
so has part: feature:101508-102527:1:exon

WP_014261765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101508-102527:1:exon

HMPREF0389_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: pheT
locus tag: HMPREF0389_RS00430
old locus tag: HMPREF0389_00546
so part of: sequence
location: 102555..104927
location: region:102555-104927:1
so has part: feature:102555-104927:1:exon
subclass of: SO_0000010

position:102555:1
position: 102555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104927:1
position: 104927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102555-104927:1:exon

HMPREF0389_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: pheT
locus tag: HMPREF0389_RS00430
old locus tag: HMPREF0389_00546
EC number: 6.1.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009529507.1
GO component: GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylalanine--tRNA ligase subunit beta
translation: MILPLKWLRDYIEMDISAEKFADQMTLTGTKSERVEHIGEAISDVVVGKITEITKHPDADKLIVTQVDVGEEVKQIVTGANNIKVGDYVPVAMHGAKLPDGTKIKRGKMRGVVSDGMLCSAGELGIDSKFLSEEQKNGLYILEGEPALGQDIRDVLDLKDAIIEFELTANRPDCNSIIGIAYEAKATLDKEVTIPTLKVKEEGANIGVDVKCENNNLCGRYMAREITDVKIAPSPYYIQRRLIESGIRPINNIVDLTNYVMLEYGQPMHAFDYDKLEGHTIYIKQASDGQSCITLDEEERKLDSSMITICDSNKVIALGGVMGASCSQIDESTTHIVLESAHFDADTIRATSKKLGLRTDASARFEKGIDRYRCEKALNRFCQLVEELEIGTVCKGFVDTATELDDKSTVTFSKNRVNEVIGIEFSSEEICSILSKLNFESKIEGDMITTVAPEYRTDIEKIADIIEEISRIYGFNNVVSAPIVGEIIPATKSESRLYEDSMKAFAMKNGLTEILTYSFVSPIGVEKAKLSETKENDFVKLLNPLGEETSVMRTSLIPNMLEVISMNAARKNEFFAGFEFGNIFCLKQSNPLEQKSFVAGVYGKEEDFFSLKGRIEGILNGLRYQSRVYLPNKEHPTFHPGRCADIFIGEEKVGILGEVHPKAASAFNIKKKVYLCELDIPFLMSLFDNMMKYRQIPKFPAMKRDIALVVDKNQYVSEIEQIIWKNGKSLIEKIELFDIYEGDQIEKDKKSVAYSVVYRKKEATLTDEEVNRIQEKILKELEEKLHAVLR
SIO_010081: HMPREF0389_RS00430
subclass of: SO_0000673
so part of: HMPREF0389_RS00430
location: 102555..104927
location: region:102555-104927:1
so has part: feature:102555-104927:1:exon

WP_014261766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102555-104927:1:exon

HMPREF0389_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00435
old locus tag: HMPREF0389_00545
so part of: sequence
location: complement(105248..105499)
location: region:105248-105499:-1
so has part: feature:105248-105499:-1:exon
subclass of: SO_0000010

position:105248:-1
position: 105248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105499:-1
position: 105499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105248-105499:-1:exon

HMPREF0389_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00435
old locus tag: HMPREF0389_00545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007790526.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEENNYTKVIGLRGYYFIKSYEKPKKNKVKIRKILEETVRKVFRNRDCSVVVFFEETEKEILITPDSPTEEIVKYLGKSFLPK
SIO_010081: HMPREF0389_RS00435
subclass of: SO_0000673
so part of: HMPREF0389_RS00435
location: complement(105248..105499)
location: region:105248-105499:-1
so has part: feature:105248-105499:-1:exon

WP_041250727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105248-105499:-1:exon

HMPREF0389_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00440
old locus tag: HMPREF0389_00544
so part of: sequence
location: 105741..106544
location: region:105741-106544:1
so has part: feature:105741-106544:1:exon
subclass of: SO_0000010

position:105741:1
position: 105741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106544:1
position: 106544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105741-106544:1:exon

HMPREF0389_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00440
old locus tag: HMPREF0389_00544
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003417310.1
GO process: GO:0015969 - guanosine tetraphosphate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTP pyrophosphokinase family protein
translation: MGELIDWKKLLLPYECAVEELKVKFKNIRKELRANGQYSPIEFVTGRVKKVTSILEKVKRMDIEVEEIEDKIEDIAGIRIMCQMVEDIYLLVKYIEERQDMQIVYVKDYIKSPKESGYRSYHIIIKYPIQTVYGYKEILAEIQIRTLAMNFWATVEHSLNYKYDKYVPVEIRQRLTKAADAAARLDEEMAFIREEIVSAQVAFEHKSLVVAEITLCIQKIEQLGYTEEALYYQKRLDVTNDDKETEGLLNLKTEVNLFLIKLMEETK
SIO_010081: HMPREF0389_RS00440
subclass of: SO_0000673
so part of: HMPREF0389_RS00440
location: 105741..106544
location: region:105741-106544:1
so has part: feature:105741-106544:1:exon

WP_041250728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105741-106544:1:exon

HMPREF0389_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00445
old locus tag: HMPREF0389_00543
so part of: sequence
location: 106568..107263
location: region:106568-107263:1
so has part: feature:106568-107263:1:exon
subclass of: SO_0000010

position:106568:1
position: 106568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107263:1
position: 107263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106568-107263:1:exon

HMPREF0389_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00445
old locus tag: HMPREF0389_00543
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013361139.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metallophosphoesterase
translation: MSVFAIGDLHMSTVQKKTMDQFGWFHHVDRILEDWNNKITEDDIVLLVGDISWALRLEEVEPDIKILSKLPGHKFMIRGNHDYWWSSVSKMSKKFPQIHFLHNNHFVIGDYVIFGTRGWICPNDTQFTETDEKIYERELKRLKNSVNSASETVIQNKKKLLMLHYPPMNDKKEPSGFTDIIEEAKIDVVCYGHLHGEEFHKMGFEGIKNHTEYHLVSCDYLDFKVKKILDG
SIO_010081: HMPREF0389_RS00445
subclass of: SO_0000673
so part of: HMPREF0389_RS00445
location: 106568..107263
location: region:106568-107263:1
so has part: feature:106568-107263:1:exon

WP_014261769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106568-107263:1:exon

HMPREF0389_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00450
old locus tag: HMPREF0389_00542
so part of: sequence
location: 107335..108258
location: region:107335-108258:1
so has part: feature:107335-108258:1:exon
subclass of: SO_0000010

position:107335:1
position: 107335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108258:1
position: 108258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107335-108258:1:exon

HMPREF0389_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00450
old locus tag: HMPREF0389_00542
inference: COORDINATES: protein motif:HMM:NF023568.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MGVVEKYFLSPTDDWEIHYYCAFPQEKIKAIVEISHGMYENVDAYQSLMEFLCNNGYAVYFLEHRGHGDSASHGLGNLGESDIYLKMIRDIRALNVIIRKQFPYSKIYLLGNSLSAFLVQRYIQIYPNTISGMIQCAAGGKDQVPHVKLGKNIAYSLKKMGFSQKKSPLLFEHQQSFLDSMENSKWLLFSVKNAISKEKLLSIFSKKDEKAYTVNAYYWIYRGICENFNRKAMKPVNKELPILLLSGNRDPIGSFGEGILHLVRWYQSFGMNSVQYKIYEEIGHNILRSSKREEVYQDIVDWLETVY
SIO_010081: HMPREF0389_RS00450
subclass of: SO_0000673
so part of: HMPREF0389_RS00450
location: 107335..108258
location: region:107335-108258:1
so has part: feature:107335-108258:1:exon

WP_014261770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107335-108258:1:exon

HMPREF0389_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00455
old locus tag: HMPREF0389_00541
so part of: sequence
location: 108871..109932
location: region:108871-109932:1
so has part: feature:108871-109932:1:exon
subclass of: SO_0000010

position:108871:1
position: 108871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109932:1
position: 109932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108871-109932:1:exon

HMPREF0389_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00455
old locus tag: HMPREF0389_00541
EC number: 3.4.-.-
inference: COORDINATES: protein motif:HMM:NF014566.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0071586 - CAAX-box protein processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CPBP family intramembrane metalloprotease
translation: MKNKIEFSADGREICRFLTVVFILTLIIGIATAYGYYIGSNIRMAGYVMMLIPALSVILTVKWDKTKVYPKKIFDFYQVTAFLIFLYVVISIFMGIDLPSDLGIVGWLFNGESLVGNIFPIIVGLTNFFLIFFIYENNQMEENKELMKLWKLSDFNFKKIIQYTCYFIVLKNIIMIVVGILYVNIDFVLYILDYKFWLAEVIVIPMVFLYVPFFFGEEYGWRFFLQPRLQKKFGKIKGVILLGVIWGIWHLPLVLFYYSTPENFFYAVTHQIMCCIFLSIVFAYFYEKSGSLWCVVSFHSINNAIAGIVAVKQGGIKELYSGDWMDLGVSFAVFAFIAIFFLKTDVFTEKKLN
SIO_010081: HMPREF0389_RS00455
subclass of: SO_0000673
so part of: HMPREF0389_RS00455
location: 108871..109932
location: region:108871-109932:1
so has part: feature:108871-109932:1:exon

WP_014261771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108871-109932:1:exon

HMPREF0389_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00460
old locus tag: HMPREF0389_00540
so part of: sequence
location: complement(110195..111145)
location: region:110195-111145:-1
so has part: feature:110195-111145:-1:exon
subclass of: SO_0000010

position:110195:-1
position: 110195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111145:-1
position: 111145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110195-111145:-1:exon

HMPREF0389_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00460
old locus tag: HMPREF0389_00540
inference: COORDINATES: protein motif:HMM:TIGR00374.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysylphosphatidylglycerol synthase transmembrane domain-containing protein
translation: MKELYEIPKIIRNVQQQYILIAIFTMFLFFLCQSITTKRLLHAFGYKATVVQCFRYSLIDYYFSSITPGSSGGQPSEIYYMKKDGIAVSESSLIMLLYNSMYHIGVIAVIFIFTLGNIRYILGESGIMLTLFKVGMLIQFLLATIFFLLIFAANIVYNIMDRIVLILKSYEYKKVDKLEKTIKKTLVSYQTSADWIAKNPKIFLEIIPIILLQITLFYSISYWIGKAFGVENISLIKMIAYQGVFIMTFESLPLPGGIGVAETGFLRIFSRIYTKETLAGALLLTRGITYYCYLLLGAFMSFLSKGQKVHRIKNIA
SIO_010081: HMPREF0389_RS00460
subclass of: SO_0000673
so part of: HMPREF0389_RS00460
location: complement(110195..111145)
location: region:110195-111145:-1
so has part: feature:110195-111145:-1:exon

WP_242821727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110195-111145:-1:exon

HMPREF0389_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00465
old locus tag: HMPREF0389_00539
so part of: sequence
location: complement(111220..111882)
location: region:111220-111882:-1
so has part: feature:111220-111882:-1:exon
subclass of: SO_0000010

position:111220:-1
position: 111220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111882:-1
position: 111882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111220-111882:-1:exon

HMPREF0389_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00465
old locus tag: HMPREF0389_00539
inference: COORDINATES: protein motif:HMM:NF013672.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide deacetylase family protein
translation: MLIKTILIPAFLWSGYSILPTVYYKFIYKERYQKNELQLTFDDGPNPIYTEQILDILKQHHTKAIFFVIAEKVEKYPDILKKIHQEGHDVGLHCYHHTHPFLWGIWKTKKDMQKSKQILENHGIKPSYYRPPHGWVNLSMILISKRWNMPLKLWTCIVGDWNENKDWKDIYDAMQKEKQKGGVICLHDSNHKMNSSSKAPENTISALNEYFKKCGDTNWT
SIO_010081: HMPREF0389_RS00465
subclass of: SO_0000673
so part of: HMPREF0389_RS00465
location: complement(111220..111882)
location: region:111220-111882:-1
so has part: feature:111220-111882:-1:exon

WP_014261773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111220-111882:-1:exon

HMPREF0389_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00470
old locus tag: HMPREF0389_00538
so part of: sequence
location: complement(111876..112973)
location: region:111876-112973:-1
so has part: feature:111876-112973:-1:exon
subclass of: SO_0000010

position:111876:-1
position: 111876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112973:-1
position: 112973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111876-112973:-1:exon

HMPREF0389_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00470
old locus tag: HMPREF0389_00538
inference: COORDINATES: protein motif:HMM:NF018613.2
GO function: GO:0016758 - hexosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MKVLTLTAKCGMGHFQCAKAIEEQLKKDFYLADVECVDIYEIKFDDKTELFYKCYNIIVESGNLLYNLAYKKITKNNQNPALTKIMSKILLDDFSRFIEIKNPDIVISTYSFTSQLMSLYKEKTGSQIPLITWITDVKPHNGWVNFNTDKYIIADEVTKKELQKLGIDVNKIKIGGIPISNKFDFEISKNKNNKKNILVMGGGLGLLPKKMKFYEKLASLPDVEVTIVTGKNKKLYHKLIDKFPTLNILGYVNNIDYLMQNSDILLTKAGGITTFEAIYNETPMIVFKPFLEQEVHNAEYISNKEIGYVLPSKMKRCQKDIDLILEIVENDDLLEDMKYNIRKIKNGIDSNVLEETILEESVQKC
SIO_010081: HMPREF0389_RS00470
subclass of: SO_0000673
so part of: HMPREF0389_RS00470
location: complement(111876..112973)
location: region:111876-112973:-1
so has part: feature:111876-112973:-1:exon

WP_041250729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111876-112973:-1:exon

HMPREF0389_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00475
old locus tag: HMPREF0389_00537
so part of: sequence
location: 113360..114202
location: region:113360-114202:1
so has part: feature:113360-114202:1:exon
subclass of: SO_0000010

position:113360:1
position: 113360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114202:1
position: 114202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113360-114202:1:exon

HMPREF0389_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00475
old locus tag: HMPREF0389_00537
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008750050.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MNMMQSFNRTIDYIETVLDDQVDEKKILYLSGYSYPMFSRLFSVLTGSSLSEYIRNRRLTESAIELRNCDNKITDIAFKYGYDSLDSFGAAFKKFHGFTPSQVRHGKPFQLVSRVQLTLTIKGGRSMNVSIQKKAGFFVAGIVAKEIESSLCEEVWAKLFENYSHEELSKLGTGESVGVCYDMSNPNKINYMAGYIVSELVKAKGMGLDILEVEETEYAVLELEGKVPDCIHNGWKYAMEVFFPEHGYRHSGKPDFEYYYEGDMDSSDYKMELWIPIVKE
SIO_010081: HMPREF0389_RS00475
subclass of: SO_0000673
so part of: HMPREF0389_RS00475
location: 113360..114202
location: region:113360-114202:1
so has part: feature:113360-114202:1:exon

WP_014261775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113360-114202:1:exon

HMPREF0389_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: leuS
locus tag: HMPREF0389_RS00480
old locus tag: HMPREF0389_00536
so part of: sequence
location: complement(114282..116693)
location: region:114282-116693:-1
so has part: feature:114282-116693:-1:exon
subclass of: SO_0000010

position:114282:-1
position: 114282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116693:-1
position: 116693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114282-116693:-1:exon

HMPREF0389_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: leuS
locus tag: HMPREF0389_RS00480
old locus tag: HMPREF0389_00536
EC number: 6.1.1.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012160425.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: leucine--tRNA ligase
translation: MREYNPNQIEKKWQSHWEKNHTFRSEIDHNKKKYFNLIEFPYPSGAGLHVGHIRAYTSLEVISRKRRLEGYNVLFPIGWDAFGLPTENYAMQTGEHPRTVTDRNIEVFTDQLKSAGYSFDWERTIDTTDPNYYKWTQWIFLQMFKHKLAYKDTTYVNFCNNCKVVLANEESQNGVCDRCGHDVVQMEKDVWFLKIREYADKLLDGLEELDFLPRIKLEQENWIGRSNGAEVNFPISGTEDFLRIYTTRPDTIFGVTFMVMAPEHPYLKKYEAKLQNLDEIKDYQEQATRKTEFERVQLAKDKTGVEIKGLTVINPLTKKEIPIWISDYVMMGYGTGAIMAVPAHDSRDWEFAKKFNIPIVEVVKGGDVQNEVYKTSPQDILVNSDKFDGLTVEEAIPAIIRHIEENKLGEAKTNYKMKNWAFNRQRYWGEPIPIIHCEHCGMVPVPEEQLPVTLPDVEEYRPTNTGESPLANIEDWVKVTCPVCGKPAKRETDTMPQWAGSSWYFLRYMDPHNNDALASQEALDYWGPVDWYNGGMEHVSRHLIYSRFWHQFLHDIDAVSYPEPYKKRTAQGLILGPDGEKMSKSRGNVINPNEIIDNYGADTLRTYIMFIGDYERPAVWSDSSVKGCKRFLERVWKLQEMVTEQNEYDKKHISLMHKTIKKVSEDFENVKFNTAIAAMMTAVNQFYDDEFITRKELQDFITLLYPIAPHICCEIWELQQFEKDMDHTDWPTWDESKTIDTVVEIPIQINGKIRGKVTVSKDITQEELLKIVETEENIKNFIGDKKVIKTIYVPGKILNMVIK
SIO_010081: HMPREF0389_RS00480
subclass of: SO_0000673
so part of: HMPREF0389_RS00480
location: complement(114282..116693)
location: region:114282-116693:-1
so has part: feature:114282-116693:-1:exon

WP_014261776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114282-116693:-1:exon

misc_binding
type: Miscellaneous Binding Site
subclass of: SO_0000409
RO_0002162: 546269
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00230
inference: COORDINATES: profile:INFERNAL:1.1.4
note: T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: tRNA
so part of: sequence
location: complement(116857..117056)
location: region:116857-117056:-1
so has part: feature:116857-117056:-1:region

position:116857:-1
position: 116857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117056:-1
position: 117056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116857-117056:-1:region

HMPREF0389_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: arcC
locus tag: HMPREF0389_RS00485
old locus tag: HMPREF0389_00535
so part of: sequence
location: 117543..118475
location: region:117543-118475:1
so has part: feature:117543-118475:1:exon
subclass of: SO_0000010

position:117543:1
position: 117543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118475:1
position: 118475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117543-118475:1:exon

HMPREF0389_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: arcC
locus tag: HMPREF0389_RS00485
old locus tag: HMPREF0389_00535
EC number: 2.7.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010298030.1
GO function: GO:0008804 - carbamate kinase activity [Evidence IEA]
GO process: GO:0006520 - amino acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbamate kinase
translation: MKRIVVALGGNALGNSPEEQMQKVKHTAKPIVDLIAEGNEVIVAHGNGPQVGMINLAMDTASNSEAKTAKMPFPECGAMSQGYIGYHLQNAIREELINRGMNKPVATIITQVIVDKNDAAFENPTKPIGAFYTKEEAEKMSSERGETFKEDAGRGYRRVVPSPLPIDIAEKETIQALIDANQVVITVGGGGIPVYEDGNKLVGVPAVIDKDFASSKLAEIVDADYLIILTAVEKVAVNFGKENEEWLSELSMSQAEQYIKEGHFAAGSMLPKVKAAMAFAQSKEGRKALITSLEKAADGIQGKTGTIIVK
SIO_010081: HMPREF0389_RS00485
subclass of: SO_0000673
so part of: HMPREF0389_RS00485
location: 117543..118475
location: region:117543-118475:1
so has part: feature:117543-118475:1:exon

WP_014261777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117543-118475:1:exon

HMPREF0389_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00490
old locus tag: HMPREF0389_00534
so part of: sequence
location: 119233..119505
location: region:119233-119505:1
so has part: feature:119233-119505:1:exon
subclass of: SO_0000010

position:119233:1
position: 119233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119505:1
position: 119505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119233-119505:1:exon

HMPREF0389_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00490
old locus tag: HMPREF0389_00534
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013361148.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Veg family protein
translation: MVNNHTLDEIKRGLEKYLGRDVVVRANRGRKKFVKKEGVLECTYPNVFVVSYEGNDNHVTRVSYSYADILTSTVQLTLMRHEDSEKQKYA
SIO_010081: HMPREF0389_RS00490
subclass of: SO_0000673
so part of: HMPREF0389_RS00490
location: 119233..119505
location: region:119233-119505:1
so has part: feature:119233-119505:1:exon

WP_156775214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119233-119505:1:exon

HMPREF0389_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: ispE
locus tag: HMPREF0389_RS00495
old locus tag: HMPREF0389_00533
so part of: sequence
location: 119654..120529
location: region:119654-120529:1
so has part: feature:119654-120529:1:exon
subclass of: SO_0000010

position:119654:1
position: 119654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120529:1
position: 120529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119654-120529:1:exon

HMPREF0389_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: ispE
locus tag: HMPREF0389_RS00495
old locus tag: HMPREF0389_00533
EC number: 2.7.1.148
inference: COORDINATES: protein motif:HMM:TIGR00154.1
GO function: GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO process: GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
translation: MKQLSLDVCGKINLSLDVTGKRDDGYHFVSMIMQTVSLKDSLCIKKREDDFFFLNIGNSSIPSGEDNIIYKAVSLYHQMTRTGLGYEITLDKKIPVEAGMAGGSADAAGVLYALNEMNHCKLSREELLKLSVRLGADVPYMLLGGTYLATGIGEHLQKLPDVSYHILVVKPNKGVSTKSVYQNLDINHLKNRPNNDKMIECIHSKKYDEIYPFMGNVLYESAKKFVPEMERIIFDMESKFSCSKAMMTGSGSTVYGIFENLEDRSRANKYFLEHYTEVYEVETTNYSISIR
SIO_010081: HMPREF0389_RS00495
subclass of: SO_0000673
so part of: HMPREF0389_RS00495
location: 119654..120529
location: region:119654-120529:1
so has part: feature:119654-120529:1:exon

WP_014261779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119654-120529:1:exon

HMPREF0389_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00500
old locus tag: HMPREF0389_00532
so part of: sequence
location: 120550..121611
location: region:120550-121611:1
so has part: feature:120550-121611:1:exon
subclass of: SO_0000010

position:120550:1
position: 120550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121611:1
position: 121611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120550-121611:1:exon

HMPREF0389_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00500
old locus tag: HMPREF0389_00532
EC number: 6.3.2.-
inference: COORDINATES: protein motif:HMM:NF002528.0
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-alanine--D-alanine ligase family protein
translation: MVKQNIAILFGGKSEEHEVSCRSAKYIFENVDRDKYRPFLIGIDKLGNYYYMKECNIEHLIDCTWTDFIETNEVCFSKGDERFTLQLQGEKIVFDVVFPALHGPNGEDGKLQGLMEFVNIPYVGCNSISSAICMDKEITKRLVGIEGVRQVPYVILYEGVVAEEKLLEMEEIGYPLFVKPANMGSSVGVSKAENQQELLQAIRVASKYDDKVIVEKGIDALELEIAALGDGKDAYFSTVGCIKPRDIFYDYDSKYLTNDADFYIPAPISFEKETELREMARKAYTAMLCEGLSRIDFFMDKETQEIYFNEINTMPGFTAISLYPQLMDYDGVGAKELIGRLIDYAWRRYEKNK
SIO_010081: HMPREF0389_RS00500
subclass of: SO_0000673
so part of: HMPREF0389_RS00500
location: 120550..121611
location: region:120550-121611:1
so has part: feature:120550-121611:1:exon

WP_014261780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120550-121611:1:exon

HMPREF0389_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00505
old locus tag: HMPREF0389_00531
so part of: sequence
location: 121631..122062
location: region:121631-122062:1
so has part: feature:121631-122062:1:exon
subclass of: SO_0000010

position:121631:1
position: 121631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122062:1
position: 122062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121631-122062:1:exon

HMPREF0389_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00505
old locus tag: HMPREF0389_00531
inference: COORDINATES: protein motif:HMM:NF020711.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1934 domain-containing protein
translation: MQDALIKIKTTQFLSNQKEPEVMEFVTQGKAVCKKNSVYLEYKESELSGLQGTTTILKFVDSGEIKLKRFGNQTSDMVFAKGKRFKTKYRTEYGTMSMEILTKDISVDILENPFDVRAVIQYDISVKDFFEGRNEMIIQAKKI
SIO_010081: HMPREF0389_RS00505
subclass of: SO_0000673
so part of: HMPREF0389_RS00505
location: 121631..122062
location: region:121631-122062:1
so has part: feature:121631-122062:1:exon

WP_014261781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121631-122062:1:exon

HMPREF0389_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: tilS
locus tag: HMPREF0389_RS00510
old locus tag: HMPREF0389_00530
so part of: sequence
location: 122082..123482
location: region:122082-123482:1
so has part: feature:122082-123482:1:exon
subclass of: SO_0000010

position:122082:1
position: 122082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123482:1
position: 123482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122082-123482:1:exon

HMPREF0389_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: tilS
locus tag: HMPREF0389_RS00510
old locus tag: HMPREF0389_00530
EC number: 6.3.4.19
inference: COORDINATES: protein motif:HMM:TIGR02432.1
GO function: GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA lysidine(34) synthetase TilS
translation: MNLKNKVLETIRQNNLIQPKEKVIVAFSGGPDSVCLLHLLHELKAELDIKLYAFHLNHQIRGLDAHRDAWYCLSLCDEYDIPFFVDSTDVPGYAQNMKMSLEEAARDVRYKKLFYLKSILNADKIAVAHNMDDQVETVLMRMMRGTGLYGLKGMEQLLSNGIIRPLLSVQKKEIIEELEQNGIHWQVDTTNQEDNYTRNKIRLSMILLMEECYPTAKENIFRMSASIREDSQYIEQNAMSFFEENHTLINSNTVKLELDDFFDMDLAIQKRSVRYSINVVLHSLKGIETVHLDSVIQLAKRYGDAQINLPKNLTVYKKQSALYFSTEELKEDILSFFYELEQNETIDISEISTEIETKVLLKDKNFMLSTGAYKKAFDFDKVSGRLFVRSREAGDRIKPMGLEGTKKIKNIFIDAKVPLAERNRIPIICDEAGNILWVVGHCISEEFKIDETTKKVILITVKQEND
SIO_010081: HMPREF0389_RS00510
subclass of: SO_0000673
so part of: HMPREF0389_RS00510
location: 122082..123482
location: region:122082-123482:1
so has part: feature:122082-123482:1:exon

WP_014261782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122082-123482:1:exon

HMPREF0389_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: ftsH
locus tag: HMPREF0389_RS00515
old locus tag: HMPREF0389_00529
so part of: sequence
location: 123501..125501
location: region:123501-125501:1
so has part: feature:123501-125501:1:exon
subclass of: SO_0000010

position:123501:1
position: 123501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125501:1
position: 125501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123501-125501:1:exon

HMPREF0389_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: ftsH
locus tag: HMPREF0389_RS00515
old locus tag: HMPREF0389_00529
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012065503.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent zinc metalloprotease FtsH
translation: MKKFLQGTMFYIALIFVIMSLVFIQSNSTSKVEKIPFSEFYTSILEHKVSEVEIQDNGMIQGKMAGSDKVFTTYAGYLAKTDGLTKEILEQTQQGVLKSKVKEPTQTHWILDLLPMVMLILIIVAFWFIFVQQAQGGGSKVMGFGKSRAKLHKEDENIKITFNDVAGLQEEKEELKEIVDFLRSPQKYWNLGARIPKGILMVGPPGTGKTYLSKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFEQAKKTAPCIIFIDEIDAVGRKRGAGLGGGHDEREQTLNQLLVEMDGFRVNESIIVMAATNRPDILDPALLRPGRFDRQVMVGSPDVKGREEILKVHSRKKPLAEDVDLKVIARGTAGFTAADIENLMNEAALLTARNNGTKIKMQTIEEAIVKTIVGLAKKSRIITEDEKKLTAYHEAGHAILATVQKFCDPVHQVTIIPRGMAGGFTMSRPQEDRYYTTKQELKEKMVELLGGRVAEELILEDVSTGASNDLERVAKIARAMVTTYAMTDKLGAMAYGDSSDEVFLGKDFTTKPNYSEEVASQIDHEIKIIVDEAYATARKLLQENIDRLHNVAQALMVYETLDSEQFKKAFNGELDLNEDVEESISEGADTFFDGEKSDDAKVSDENSDISETPINGESGVVVDVTTSVDASEQK
SIO_010081: HMPREF0389_RS00515
subclass of: SO_0000673
so part of: HMPREF0389_RS00515
location: 123501..125501
location: region:123501-125501:1
so has part: feature:123501-125501:1:exon

WP_014261783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123501-125501:1:exon

HMPREF0389_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00520
old locus tag: HMPREF0389_00528
so part of: sequence
location: complement(125721..126047)
location: region:125721-126047:-1
so has part: feature:125721-126047:-1:exon
subclass of: SO_0000010

position:125721:-1
position: 125721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126047:-1
position: 126047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125721-126047:-1:exon

HMPREF0389_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00520
old locus tag: HMPREF0389_00528
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIRMNKEAADALKELLTSKGIEATDIRVFVAGFSCSGPQFNLAIDPAKEGDYSVEIDGFTLRAEQKLIDEFGGFEIKHFSDGTNSGIYIEPDIKPQSSCSSCGGGCH
SIO_010081: HMPREF0389_RS00520
subclass of: SO_0000673
so part of: HMPREF0389_RS00520
location: complement(125721..126047)
location: region:125721-126047:-1
so has part: feature:125721-126047:-1:exon

WP_041250730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125721-126047:-1:exon

HMPREF0389_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: pepF
locus tag: HMPREF0389_RS00525
old locus tag: HMPREF0389_00527
so part of: sequence
location: 126265..128079
location: region:126265-128079:1
so has part: feature:126265-128079:1:exon
subclass of: SO_0000010

position:126265:1
position: 126265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128079:1
position: 128079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126265-128079:1:exon

HMPREF0389_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: pepF
locus tag: HMPREF0389_RS00525
old locus tag: HMPREF0389_00527
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012158532.1
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oligoendopeptidase F
translation: MMEVMKKRDETPEYLKWDISRLYKKESDYEEDLKKCEQMSVDIEKKYKNKIVSPDTAICAIREYNEFLELNDVISHYATLSVSVDMTDAQHQKRESYYYSKAAEIQTRLKFLEKEIVSLDAQILEKVKEKAPEYRVYIEDIMLKKEYMLDDSVEEALATLSPVLHSSIKGYETTKIADIEFESFVVRGKEYPNSYVLYENMYQYNPDFEIRRKSFQSFSNGLKKYQNTTAFYYQNHIQKEKIISAMRGFSSVFDYLLLDQKVTKEMYHRQIDLIMKELAPYMQKYAALLKKIYHLDKITFADLKIPVDKEIVPRITIEESKKYVREALSVLGEEYVDLIMSSYEERWVDFAQNIGKSTGGFCATPYGKHSFILLSWTGLLSEVFTLVHELGHAGHFTLNQRENSYLNQEPSLYFVEAPSTMNELLLTNYLLKDVGVDKRMKRWVLSNMISNTYFHNFVTHLLEAAYQREVYKRVDRGESLQAEDLSMIKKNVLQEFWGEDVEITDGAELTWMRQPHYYMGLYSYTYSAGLTIGTQMSNRIKEEGFSAAQDWIKVLKAGGTKNPVELAQMAGIDITTDKPLLDTIHFIGSAIKEIIQLTEELEKN
SIO_010081: HMPREF0389_RS00525
subclass of: SO_0000673
so part of: HMPREF0389_RS00525
location: 126265..128079
location: region:126265-128079:1
so has part: feature:126265-128079:1:exon

WP_014261785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126265-128079:1:exon

HMPREF0389_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00530
old locus tag: HMPREF0389_00526
so part of: sequence
location: complement(128551..128748)
location: region:128551-128748:-1
so has part: feature:128551-128748:-1:exon
subclass of: SO_0000010

position:128551:-1
position: 128551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128748:-1
position: 128748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128551-128748:-1:exon

HMPREF0389_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00530
old locus tag: HMPREF0389_00526
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009525707.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: METFNKISIENISKHDLLVILEALKYSYEHSKEEEFITLRNTMVQDLISLSDLKSEEHLIEYLQE
SIO_010081: HMPREF0389_RS00530
subclass of: SO_0000673
so part of: HMPREF0389_RS00530
location: complement(128551..128748)
location: region:128551-128748:-1
so has part: feature:128551-128748:-1:exon

WP_041250731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128551-128748:-1:exon

HMPREF0389_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00535
old locus tag: HMPREF0389_00525
so part of: sequence
location: complement(128925..129824)
location: region:128925-129824:-1
so has part: feature:128925-129824:-1:exon
subclass of: SO_0000010

position:128925:-1
position: 128925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129824:-1
position: 129824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128925-129824:-1:exon

HMPREF0389_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00535
old locus tag: HMPREF0389_00525
inference: COORDINATES: protein motif:HMM:NF024873.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease H-like domain-containing protein
translation: MKLFKMVLPHTGSLSEDDIFLDIETNGLFPNRHKIIVCGLIKKEQKETVLLQYCIDNDNERELIENISDELSTKKNIYTFHGNIFEFPFLKYKQKKLLLPNQIPYDKAHDLSPAISSFRHILNLPDYRRSTIENHFQIRRVEQIDVHEWTSKNEISEEFQWTEDAPVLRHNRSELLSLLKLKSAFENWKKSMAFYFPAFGCNMYLSNYNFSKNTASIMFLIEKTENKIPLISFCDGLDISFKDDILILKFDTISGTTNKNNTVISPVISPSRYFKKNHMVNIDNLLSVSKEILLHLFCN
SIO_010081: HMPREF0389_RS00535
subclass of: SO_0000673
so part of: HMPREF0389_RS00535
location: complement(128925..129824)
location: region:128925-129824:-1
so has part: feature:128925-129824:-1:exon

WP_014261787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128925-129824:-1:exon

HMPREF0389_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00540
old locus tag: HMPREF0389_00524
so part of: sequence
location: 130064..130747
location: region:130064-130747:1
so has part: feature:130064-130747:1:exon
subclass of: SO_0000010

position:130064:1
position: 130064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130747:1
position: 130747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130064-130747:1:exon

HMPREF0389_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00540
old locus tag: HMPREF0389_00524
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019189366.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA alkylation repair protein
translation: MLVRESLFELKEKEYADFQSRLVPNISREHFIGVRIPKIRSLAKKYLKETDELNIVFLKQLPHLYYDENIFHSIVLSEYPEYDGCIELVKEFLPFIDNWAVCDALSPKSFAAHKHEWNEDLCQWLNSEDVYTCRFGVRMLMNHYLGEDFDVSYLEAVAKIKSEDYYVKMAIAWFLSMALVKRWNETSRYLRKNTLDKWTHNKTIQKARESYQLKKEQKEYLLTLKRQ
SIO_010081: HMPREF0389_RS00540
subclass of: SO_0000673
so part of: HMPREF0389_RS00540
location: 130064..130747
location: region:130064-130747:1
so has part: feature:130064-130747:1:exon

WP_014261788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130064-130747:1:exon

HMPREF0389_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00545
old locus tag: HMPREF0389_00523
so part of: sequence
location: complement(130826..131395)
location: region:130826-131395:-1
so has part: feature:130826-131395:-1:exon
subclass of: SO_0000010

position:130826:-1
position: 130826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131395:-1
position: 131395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130826-131395:-1:exon

HMPREF0389_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00545
old locus tag: HMPREF0389_00523
EC number: 6.3.3.2
inference: COORDINATES: protein motif:HMM:TIGR02727.1
GO function: GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO process: GO:0006730 - one-carbon metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-formyltetrahydrofolate cyclo-ligase
translation: MTKKEFRQFAIKKRNSLSSEERISFSNQILQHLINSEIYQDSKKIFMYLSFQSEVDTFQLLSRALQDNKEVYAPITLPDEKKLLCGRVEDPDRDLEKDFYGILSPILQDNNIASPTDIDFVIVPGAAFDIHGYRMGYGGGYYDCFLPTLSKNAKIVALAFEEQIYPDIPKENHDIKMQYIVTEKRFLIL
SIO_010081: HMPREF0389_RS00545
subclass of: SO_0000673
so part of: HMPREF0389_RS00545
location: complement(130826..131395)
location: region:130826-131395:-1
so has part: feature:130826-131395:-1:exon

WP_014261789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130826-131395:-1:exon

HMPREF0389_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00550
old locus tag: HMPREF0389_00522
so part of: sequence
location: 131697..132899
location: region:131697-132899:1
so has part: feature:131697-132899:1:exon
subclass of: SO_0000010

position:131697:1
position: 131697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132899:1
position: 132899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131697-132899:1:exon

HMPREF0389_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00550
old locus tag: HMPREF0389_00522
inference: COORDINATES: protein motif:HMM:TIGR00225.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S41 family peptidase
translation: MKMTKFKLMLYTMVIILMTNILTVRYQLSDYVESNPNGKDMLNLMELKNVVEDEFYTDIDEEELIVGMKKGLFQGLNDPYSEFYTKEEMNELKEQTTGELIGIGVIVGIKDDNIVVISPIKDSPAMRVGLKAGDIISKVNGKEYKANELSDAVKEIKVPLSEKKSSLLGKVDYGKVKIEVLREGKEREFEIQREEISLQTVEYKQLENKIGYIAISQFADGTAKDFVKELETSKKNDDRALIIDLRNNPGGLLNEVQDVADSIMGEATIVYTQDRNGKKQYIKSRDGGELNIPLVVLINEGSASASEVLSGAVRDNEIGTLVGEKTFGKALVQTVRQLSDGSGFKLTVQQYFTPRGENINHKGIVPDVEVKLDENQLLKNQVDTQLQKAIEIIQTKLNQK
SIO_010081: HMPREF0389_RS00550
subclass of: SO_0000673
so part of: HMPREF0389_RS00550
location: 131697..132899
location: region:131697-132899:1
so has part: feature:131697-132899:1:exon

WP_014261790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131697-132899:1:exon

HMPREF0389_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00555
old locus tag: HMPREF0389_00521
so part of: sequence
location: 133151..133906
location: region:133151-133906:1
so has part: feature:133151-133906:1:exon
subclass of: SO_0000010

position:133151:1
position: 133151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133906:1
position: 133906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133151-133906:1:exon

HMPREF0389_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00555
old locus tag: HMPREF0389_00521
EC number: 2.1.1.-
inference: COORDINATES: protein motif:HMM:NF016689.2
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MREKKISLRLENICDMVPKTSKKILDVGTDHGYVPIHLVKNKRVISAIAADISGSSLQKAKDEIKKNNLSDVIFVREGNGLQVITDKDEVDTVVIAGMGGVLISDILEEASHLSRKEEMFFVLQPVQGVEELRNYLSAHHYEMKREKLFKWSGKFYQVFLCKISKNMQPSSDEYYYELSQELTKNPDRELLEYIEIQEAILQNIKHSLLQLQHKFELNLEQQNKLESVKEKILFYERVKSNASQGFGKQFG
SIO_010081: HMPREF0389_RS00555
subclass of: SO_0000673
so part of: HMPREF0389_RS00555
location: 133151..133906
location: region:133151-133906:1
so has part: feature:133151-133906:1:exon

WP_014261791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133151-133906:1:exon

HMPREF0389_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00560
old locus tag: HMPREF0389_00520
so part of: sequence
location: 133872..134651
location: region:133872-134651:1
so has part: feature:133872-134651:1:exon
subclass of: SO_0000010

position:133872:1
position: 133872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134651:1
position: 134651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133872-134651:1:exon

HMPREF0389_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00560
old locus tag: HMPREF0389_00520
inference: COORDINATES: protein motif:HMM:TIGR00486.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0051540 - metal cluster binding [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Nif3-like dinuclear metal center hexameric protein
translation: MLLKDLANSLDRITEKDSQYAWDNSGLLVGDLSKKIRKVLVTLEITPDVLQEAEEKDIDLIVSHHPIIFSGKKKLVVGSDTFDVVYELIRLGIAAYATHTNFDMLHNGLNDYFLDVWGVQDREILSDEEGKPIGRVFSVYGDNTILDIAKHIKDIFKLPEIRIIGDKFKKVTKVGVVTGSGIDVLFGSDYKEIDLFITGDVKYHQAHDILQKGKNVIDAGHFGTENIFPDAFLSLVKNKITEIEFIKSEMDVNPFQYLE
SIO_010081: HMPREF0389_RS00560
subclass of: SO_0000673
so part of: HMPREF0389_RS00560
location: 133872..134651
location: region:133872-134651:1
so has part: feature:133872-134651:1:exon

WP_014261792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133872-134651:1:exon

HMPREF0389_RS08665
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS08665
old locus tag: HMPREF0389_00519
so part of: sequence
location: 134673..135350
location: region:134673-135350:1
so has part: feature:134673-135350:1:exon
subclass of: SO_0000010

position:134673:1
position: 134673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135350:1
position: 135350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134673-135350:1:exon

HMPREF0389_RS08665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS08665
old locus tag: HMPREF0389_00519
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRIDKGYTILQRVKEHYEEEKILPELEELKEKVQDLEEFEKRIRLEIDCLRNELKSQEVSLVEADREIVTVVENIYQCSDFTDKNKLRLREEELKQSKVNIKTMMVEKFTMIDIKLEELKNLKNRKQILMLEMRPYIKLIGTKEQKIMEDIKKIEKKIRILRKGIDNDKLKAYDKKRVSMGKVFHPILDGKCSFCGETLVVTDVEDGILECPNCSRILFLEEDGE
SIO_010081: HMPREF0389_RS08665
subclass of: SO_0000673
so part of: HMPREF0389_RS08665
location: 134673..135350
location: region:134673-135350:1
so has part: feature:134673-135350:1:exon

WP_049770185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134673-135350:1:exon

HMPREF0389_RS08830
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS08830
old locus tag: HMPREF0389_00518
so part of: sequence
location: 135420..136112
location: region:135420-136112:1
so has part: feature:135420-136112:1:exon
subclass of: SO_0000010

position:135420:1
position: 135420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136112:1
position: 136112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135420-136112:1:exon

HMPREF0389_RS08830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS08830
old locus tag: HMPREF0389_00518
EC number: 3.1.26.4
inference: COORDINATES: protein motif:HMM:NF012304.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease HI family protein
translation: MEKIVIYTDGGSRGNPGPSAIGYKIIQPSTGEFLCIGEEIGETTNNIAEYTALCESLRVCLCNHVKSVEVYMDSELVVKQIIGNYRVKNINLKPLYEQAKNYISQLSDFSIHHILRGKNKEADRLVNLALDNKARIQEGNLFNLNVSKREDVKEISEMKGYLHQKHLFQDFLMKELKLSYLSVSVKDKQVMIWVSAQEFGVILENRIAIINKAKEFGYEQVVLNLKSYDE
SIO_010081: HMPREF0389_RS08830
subclass of: SO_0000673
so part of: HMPREF0389_RS08830
location: 135420..136112
location: region:135420-136112:1
so has part: feature:135420-136112:1:exon

WP_014261794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135420-136112:1:exon

HMPREF0389_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00575
old locus tag: HMPREF0389_00517
so part of: sequence
location: 136186..137262
location: region:136186-137262:1
so has part: feature:136186-137262:1:exon
subclass of: SO_0000010

position:136186:1
position: 136186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137262:1
position: 137262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136186-137262:1:exon

HMPREF0389_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00575
old locus tag: HMPREF0389_00517
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009244938.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent RNA methyltransferase
translation: MGIELGKVRDGRVGFYATAYEIAKANIFLRTAERVLIHVGSFKAQTFEELYQGIKKLPFENYLSVECQFPIAKAKSLKSKLFTIPDVQSVSKKAVVDRLRQAYPNIKKFEEKGEVYPIHIFLMKDDVEVTIDTTGPALHKRGYRERSGTAPLRETIAACMVMLTPWKKDRILLDPMCGSGTILIEAAMIGANIQPGVNRNFIGEKFHFLPKEDWMRARQDAIEGENMDVEMALYGSDIDEQVIELAKENAALAGVEEYITFSLQDMSEVRRPEEYGFLITNPPYGERIGEKEELEKTYCDLGKTISTLKNWSAFLITNYENTEKCIGKKATKKRKLYNGMLKTVYYQFLGPKPPKKQS
SIO_010081: HMPREF0389_RS00575
subclass of: SO_0000673
so part of: HMPREF0389_RS00575
location: 136186..137262
location: region:136186-137262:1
so has part: feature:136186-137262:1:exon

WP_242821718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136186-137262:1:exon

HMPREF0389_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rnmV
locus tag: HMPREF0389_RS00580
old locus tag: HMPREF0389_00516
so part of: sequence
location: 137296..137841
location: region:137296-137841:1
so has part: feature:137296-137841:1:exon
subclass of: SO_0000010

position:137296:1
position: 137296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137841:1
position: 137841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137296-137841:1:exon

HMPREF0389_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rnmV
locus tag: HMPREF0389_RS00580
old locus tag: HMPREF0389_00516
EC number: 3.1.26.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012703911.1
GO function: GO:0043822 - ribonuclease M5 activity [Evidence IEA]
GO process: GO:0006364 - rRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease M5
translation: MIKEVIVVEGKDDITAVKRAVSAEVIATNGYGFPHFVKERIRKASETKGIIILTDPDYAGKKIRSEVAAIARNCKHAFITQEEGMKNGDIGVENASPDAIRKALNCARCETETESFEFTMNDLVQNNLIMGSGAKERRIAVGEALGIGYTNAKQFLSRLNHYGITRKEFDDEIEKVNQNLR
SIO_010081: HMPREF0389_RS00580
subclass of: SO_0000673
so part of: HMPREF0389_RS00580
location: 137296..137841
location: region:137296-137841:1
so has part: feature:137296-137841:1:exon

WP_014261796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137296-137841:1:exon

HMPREF0389_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rsmA
locus tag: HMPREF0389_RS00585
old locus tag: HMPREF0389_00515
so part of: sequence
location: 137861..138721
location: region:137861-138721:1
so has part: feature:137861-138721:1:exon
subclass of: SO_0000010

position:137861:1
position: 137861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138721:1
position: 138721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137861-138721:1:exon

HMPREF0389_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rsmA
locus tag: HMPREF0389_RS00585
old locus tag: HMPREF0389_00515
EC number: 2.1.1.182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013360691.1
GO function: GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
translation: MEQNLATFVTLKEITKKYGFQFTKSLGQNFLVDTNILQKIVDSADIQEEDIVIEVGTGIGTLTRELAKRAKKVYAIEIDKKLIPIVKETTSNYNNIDFVNMDFLEVVLEDLIQEKDRKIKVIANIPYYITTPIIMKCLESSLDISTILLMIQKEVADRLSAEPSTKAYGSLSVAVQYYSDVEFVGKVSKSCFYPQPKVDSGIVKLSKKHEYIFVRDRKLFSQVVKSAFAKRRKTISNSMIGFCEQFTKDNVMKALEKSGTDAKRRGETLTVEEFAHLSNCMFEVLN
SIO_010081: HMPREF0389_RS00585
subclass of: SO_0000673
so part of: HMPREF0389_RS00585
location: 137861..138721
location: region:137861-138721:1
so has part: feature:137861-138721:1:exon

WP_014261797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137861-138721:1:exon

HMPREF0389_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00590
old locus tag: HMPREF0389_00514
so part of: sequence
location: 138842..140128
location: region:138842-140128:1
so has part: feature:138842-140128:1:exon
subclass of: SO_0000010

position:138842:1
position: 138842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140128:1
position: 140128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138842-140128:1:exon

HMPREF0389_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00590
old locus tag: HMPREF0389_00514
inference: COORDINATES: protein motif:HMM:NF014081.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidohydrolase
translation: MKILIKNVSCLTMEEPISIKENTNVGIQEGRIAFVGDVPDDFHADEVLDGRDKLLMPGLVNAHTHIAMSLFRNYAEDVAFWPWLTEKILPLEEHLIPEHVYAGSLLSQAEMIRFGITSFADMYFFMDETAKATELSGMRGLLARSVVSGDKQEEKLRESLEFHDNWNGRADGRIMVCSAPHAIYSCNGEYLQQIIHESTKRDMRIHIHLSESKKEVEDCINQYGVSPVEYLKQLGMFDLPTMIAHGVYLSEQDMDILKECHVSVINNPTSNLKLGNGFAPIHELLTKGVNVALGTDGSASNNNLNLFEEMHLAGILNKGVHLDSTVVPSTDVVKMATINGARAMGLEKVGQITPGWKADMILIDLNQPHFFPRFQLIPSLIYSAQASDVHTVIIDGKIVMKDREILTFDLEKACFECERMAKDLVDRQ
SIO_010081: HMPREF0389_RS00590
subclass of: SO_0000673
so part of: HMPREF0389_RS00590
location: 138842..140128
location: region:138842-140128:1
so has part: feature:138842-140128:1:exon

WP_014261798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138842-140128:1:exon

HMPREF0389_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: xseA
locus tag: HMPREF0389_RS00595
old locus tag: HMPREF0389_00513
so part of: sequence
location: 140150..141376
location: region:140150-141376:1
so has part: feature:140150-141376:1:exon
subclass of: SO_0000010

position:140150:1
position: 140150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141376:1
position: 141376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140150-141376:1:exon

HMPREF0389_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: xseA
locus tag: HMPREF0389_RS00595
old locus tag: HMPREF0389_00513
EC number: 3.1.11.6
inference: COORDINATES: protein motif:HMM:TIGR00237.1
GO component: GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO function: GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO process: GO:0006308 - DNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease VII large subunit
translation: MRIRTWTVGELNRYINQLFKTDPLVQNLYLEGEISSVKIHGTGNIYFTIKDDIGKVNAIMFRSNVTDIELFQEGNQIVCQASVNLYEKEGNYNLIVKNISLKGKGILYLKFLELKETLKSEGLFDSKYKKELPLFPRRVGVITSETGAVIHDIINVSRNRFGKAEIILFPAKVQGDLAVQELMDGIDYFNQKNDVDAIILGRGGGAYEELAPFNDEKLARKIFDSQIPIISAVGHETDVTISDFVADKRASTPSMAAEILFPNIDTIYENLEQKCFELQHQYRTQFHGLDVLLRDYKEQLTRYTPGWKLQKERAKNNQYLQEMNYIFSEKMIKMYADLEKNKQQLLALNPLNVLERGYGLVKSKNRIISSTKEIKSQDMIEIQLKDGMIVAEVSEVHILHKQRDFEKK
SIO_010081: HMPREF0389_RS00595
subclass of: SO_0000673
so part of: HMPREF0389_RS00595
location: 140150..141376
location: region:140150-141376:1
so has part: feature:140150-141376:1:exon

WP_014261799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140150-141376:1:exon

HMPREF0389_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: xseB
locus tag: HMPREF0389_RS00600
old locus tag: HMPREF0389_00512
so part of: sequence
location: 141403..141612
location: region:141403-141612:1
so has part: feature:141403-141612:1:exon
subclass of: SO_0000010

position:141403:1
position: 141403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141612:1
position: 141612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141403-141612:1:exon

HMPREF0389_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: xseB
locus tag: HMPREF0389_RS00600
old locus tag: HMPREF0389_00512
EC number: 3.1.11.6
inference: COORDINATES: protein motif:HMM:TIGR01280.1
GO component: GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO function: GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO process: GO:0006308 - DNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease VII small subunit
translation: MKKLKYEEKVNRLEKVIKSLQEERLDLEESVKLYEEGLQLYQSCKEELDGMEMKLKIILDGKEETFLEE
SIO_010081: HMPREF0389_RS00600
subclass of: SO_0000673
so part of: HMPREF0389_RS00600
location: 141403..141612
location: region:141403-141612:1
so has part: feature:141403-141612:1:exon

WP_169308498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141403-141612:1:exon

HMPREF0389_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00605
old locus tag: HMPREF0389_00511
so part of: sequence
location: 141617..142507
location: region:141617-142507:1
so has part: feature:141617-142507:1:exon
subclass of: SO_0000010

position:141617:1
position: 141617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142507:1
position: 142507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141617-142507:1:exon

HMPREF0389_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00605
old locus tag: HMPREF0389_00511
inference: COORDINATES: protein motif:HMM:NF012568.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyprenyl synthetase family protein
translation: MKNKFISAYQEQKNYVEKCLKEIAEKHTLKAIATLGMESMNYSLLAGGKRIRPILCLQSADLYHISNEAILPYASALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVYGEAIAILAGDGLLNLAYEIMLNDLLHGYTDGKLKAVHYIAKAAGIHGMVAGQVLDLQMENQRCDADLLKKIHRNKTGELLKASILAGALVGGASEEDCYYWEQYADHLGLVFQITDDMLDVIGNVELMGKNTGMDSKKNTYPQLFGLEKSVELAKCNANSALCCLEKIEKDTYFFEELINQLLERER
SIO_010081: HMPREF0389_RS00605
subclass of: SO_0000673
so part of: HMPREF0389_RS00605
location: 141617..142507
location: region:141617-142507:1
so has part: feature:141617-142507:1:exon

WP_014261801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141617-142507:1:exon

HMPREF0389_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00610
old locus tag: HMPREF0389_00510
so part of: sequence
location: 142513..142962
location: region:142513-142962:1
so has part: feature:142513-142962:1:exon
subclass of: SO_0000010

position:142513:1
position: 142513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142962:1
position: 142962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142513-142962:1:exon

HMPREF0389_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00610
old locus tag: HMPREF0389_00510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013361557.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: divergent PAP2 family protein
translation: MQGIHQLLQNKVLGVAILCWFVAQTLKVIFTIIIDRRFDFTRFVGSGGMPSSHSSFVIGLANSVGLTEGYDSTIFALSLVFALVVMYDAAGVRQSVGQQAVILNQLFDMSDKQSKVWRDYDKLKELVGHTPIEVFFGALLGIILSTVLI
SIO_010081: HMPREF0389_RS00610
subclass of: SO_0000673
so part of: HMPREF0389_RS00610
location: 142513..142962
location: region:142513-142962:1
so has part: feature:142513-142962:1:exon

WP_014261802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142513-142962:1:exon

HMPREF0389_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00615
old locus tag: HMPREF0389_00509
so part of: sequence
location: 142987..143799
location: region:142987-143799:1
so has part: feature:142987-143799:1:exon
subclass of: SO_0000010

position:142987:1
position: 142987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143799:1
position: 143799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142987-143799:1:exon

HMPREF0389_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00615
old locus tag: HMPREF0389_00509
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013361555.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
GO process: GO:0032259 - methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TlyA family RNA methyltransferase
translation: MKQRLDILLVERNFFTSRERAKRNIMAGKVLVDNRVIDKAGMMIDADAEIRVKEDVIPYVSRGGLKLEKAMKSFLISLENKVCMDIGASTGGFTDCMLRNGATRVYSVDVGYGQLDWKLRNDDRVVVLERTNIRKLTTEKVDSQIDFFSIDVSFISLKLVFPTLRTFSKEYFQCVALIKPQFEVGKEEVGKNGVVRDVSKHKKAIEMCVGYAKENNFRILGLTWSPIRGPKGNIEYLLYFDSSENEDCIIDIDKVVSQSHEEDNVEDMLC
SIO_010081: HMPREF0389_RS00615
subclass of: SO_0000673
so part of: HMPREF0389_RS00615
location: 142987..143799
location: region:142987-143799:1
so has part: feature:142987-143799:1:exon

WP_041250903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142987-143799:1:exon

HMPREF0389_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: recN
locus tag: HMPREF0389_RS00620
old locus tag: HMPREF0389_00508
so part of: sequence
location: 143793..145478
location: region:143793-145478:1
so has part: feature:143793-145478:1:exon
subclass of: SO_0000010

position:143793:1
position: 143793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145478:1
position: 145478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143793-145478:1:exon

HMPREF0389_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: recN
locus tag: HMPREF0389_RS00620
old locus tag: HMPREF0389_00508
inference: COORDINATES: protein motif:HMM:TIGR00634.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RecN
translation: MLKEIYIENFALISQLHIDINRGFTVITGETGSGKSIIIDAISLCLGRRGSKEFVRHGEDKAIIELRLENLPKKIEKELSEIGIDTDGQLIVTRELQKDGSSVSRMNRRMVPVSVLKSVMMDLITIHGQNEYESITQTDKQLQLLDNFGKSHIQGRKQEYSKLYTEYMELLQRIDKLSEHKDSGQLTRELDLLYYQRDEIESAMIQDGELEKLEEEKRKLLHFEKIQDSFNEVYSLLSKNEQNAMNQLNESISILSSVEPYSNFALNCREVLQEAYYMVEDISVELGRCMVADSYDEEQLDDVISRLDLLTRLYRKYGGDYHKTKQYYEEVCDRIYEIEKREDLLKDYLVQREKLEHRLLQYAKILQSERKKVASSLEKRMIKELSTLNLKNTKYEIRFFEKSFSDSGIDEISFFISFNTGEEPKPFHKIASGGEISRFMLALKNIISTTDEIDTMIFDEIDTGVSGVAANQIGEKLQEIGQYKQVLCITHLPQIASFGAQHLLVAKEESRGSMNTHIYALTKEDRIREIAKMTVGENVTPISLENASELLHKNQKERELQ
SIO_010081: HMPREF0389_RS00620
subclass of: SO_0000673
so part of: HMPREF0389_RS00620
location: 143793..145478
location: region:143793-145478:1
so has part: feature:143793-145478:1:exon

WP_014261804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143793-145478:1:exon

HMPREF0389_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00625
old locus tag: HMPREF0389_00507
so part of: sequence
location: 145475..146017
location: region:145475-146017:1
so has part: feature:145475-146017:1:exon
subclass of: SO_0000010

position:145475:1
position: 145475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146017:1
position: 146017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145475-146017:1:exon

HMPREF0389_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00625
old locus tag: HMPREF0389_00507
EC number: 3.6.-.-
inference: COORDINATES: protein motif:HMM:NF012514.2
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NUDIX hydrolase
translation: MNKENTIDSKSIYSGKIVQLKVDTVEIVGKGYAQREVISHRGGVCCVAVTEENKIVLVRQFRKAVEQELLELPAGTLEVGETPKQAIIRELKEETGYHFTEVESMVEFFPSPGYTNELGHLFIGKAKDRGEMELDGDEEIEVEEFTLDELLNKINQGEIKDAKTILGICMYRLFLDKKME
SIO_010081: HMPREF0389_RS00625
subclass of: SO_0000673
so part of: HMPREF0389_RS00625
location: 145475..146017
location: region:145475-146017:1
so has part: feature:145475-146017:1:exon

WP_014261805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145475-146017:1:exon

HMPREF0389_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: mltG
locus tag: HMPREF0389_RS00630
old locus tag: HMPREF0389_00506
so part of: sequence
location: 146038..147051
location: region:146038-147051:1
so has part: feature:146038-147051:1:exon
subclass of: SO_0000010

position:146038:1
position: 146038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147051:1
position: 147051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146038-147051:1:exon

HMPREF0389_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: mltG
locus tag: HMPREF0389_RS00630
old locus tag: HMPREF0389_00506
inference: COORDINATES: protein motif:HMM:TIGR00247.1
GO function: GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO process: GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endolytic transglycosylase MltG
translation: MKCNIFRVLTLILLSIVFFTGCVFRADLSPVDSTDSNMQLFEVENGSNVKTVSKQLESEGLIRNGKDFLRYAKKNNLTNIKAGKYHFSKSMSSQEILDNMVNGKIYLGEKIIVPEGFEIGQIAERLAKSGIVDKDKFLELASQPKLFEEQYSFLRGMTQKNLEGYLYPNTYFFEKNTSEEEVIIAMLDEFDKVYRMELQPLLKDSEFTIHQAVILGSIIEKEVALEKDRPLVSSVFHNRLKKGMRLQSDATVQYVLIERKDKVLYKDLKIESPYNTYRVKGLPIGAICNPGKSSVIAALKPADTDYLFFLTKNDGSKEQVYTKVYEEHLENKKKYLD
SIO_010081: HMPREF0389_RS00630
subclass of: SO_0000673
so part of: HMPREF0389_RS00630
location: 146038..147051
location: region:146038-147051:1
so has part: feature:146038-147051:1:exon

WP_014261806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146038-147051:1:exon

HMPREF0389_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00635
old locus tag: HMPREF0389_00505
so part of: sequence
location: 147255..147926
location: region:147255-147926:1
so has part: feature:147255-147926:1:exon
subclass of: SO_0000010

position:147255:1
position: 147255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147926:1
position: 147926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147255-147926:1:exon

HMPREF0389_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00635
old locus tag: HMPREF0389_00505
EC number: 2.1.1.-
inference: COORDINATES: protein motif:HMM:NF013742.2
GO function: GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0032259 - methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: O-methyltransferase
translation: MEIVEKHVENYIKEHIPTKDSFFCEMEQYAKEYYVPIISPESLRFLETILLLHKPKKILEIGTAIGYSALNFCRILKGDCTVTTYERNQKRYDTAKAFITRSEYSNNIDVVYSDATEGIDLGDAIYDMAFIDAGKSQYQFFFDQIYPHIKKGGILVSDNVLFRGEVCQKSELDVTKRNRTIYRRMNNYLSFLMTENNRFHTSLIPIGDGMAVTIKMEDEMTLR
SIO_010081: HMPREF0389_RS00635
subclass of: SO_0000673
so part of: HMPREF0389_RS00635
location: 147255..147926
location: region:147255-147926:1
so has part: feature:147255-147926:1:exon

WP_014261807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147255-147926:1:exon

HMPREF0389_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00640
old locus tag: HMPREF0389_00504
so part of: sequence
location: 147976..149217
location: region:147976-149217:1
so has part: feature:147976-149217:1:exon
subclass of: SO_0000010

position:147976:1
position: 147976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149217:1
position: 149217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147976-149217:1:exon

HMPREF0389_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00640
old locus tag: HMPREF0389_00504
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012063600.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: U32 family peptidase
translation: MKKIELLSPAGDLEKLKMAIIYGADAVYIGGTNFGLRVASKNFTDESMQEGIEFAHSHGKKVYVTCNIIPHNEDLVGLEDYLKKLYKMGVDAIIVSDPGIFMIARQTVPELEIHISTQANNTNYQSALFWYQQGAKRVVTARELSFEEVREIRDRIPKDMDIESFVHGAMCISYSGRCLISNYMTGRDANRGECAHPCRWNYVLMEQNREGEYYPVEEDEHGTYFFNSKDLCMIEYIPEIVESGITSLKIEGRVKTAYYVATVTRAYRMALDEYLKDPQNYKFRPEWLDELKKASYRDFTTGFYQDKPTGKDQNYGTSSYIRNYDFVGVVKDYDKEKNLIQVEIRNRLFKDDEIEMIGPNVPTEYLKVNAMYDEDMQEVQVAPRPMELLWLDLGTSAKENYILRKKAANAIIE
SIO_010081: HMPREF0389_RS00640
subclass of: SO_0000673
so part of: HMPREF0389_RS00640
location: 147976..149217
location: region:147976-149217:1
so has part: feature:147976-149217:1:exon

WP_014261808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147976-149217:1:exon

HMPREF0389_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rny
locus tag: HMPREF0389_RS00645
old locus tag: HMPREF0389_00503
so part of: sequence
location: 149398..150987
location: region:149398-150987:1
so has part: feature:149398-150987:1:exon
subclass of: SO_0000010

position:149398:1
position: 149398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150987:1
position: 150987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149398-150987:1:exon

HMPREF0389_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rny
locus tag: HMPREF0389_RS00645
old locus tag: HMPREF0389_00503
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003428216.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease Y
translation: MDNIEPITIIVGALFGLVGLLIGYIIRKNIAEGKLKQAETVADQIISKANEQAESIKSDAKRKIKDAEAMKKEKLLEAKEESHRIKQEADREYKERRIELQKFEDRVIQKEATLDKKMSQLEARETKLFDKVKEVESREEEVEHIKAEQLEKLENISNLTVEEAKEQIISNVEKDVRRELSVMIKDMEAEAKDQADKKAREIVSYAIQKCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLESLTGVDFIIDDTPEAVVLSAFDPIRREIARIALEKLISDGRIHPARIEEMVEKAKEEIEVILKEEGEKAVFETGVYGLHPELVKLLGRLHFRTSYGQNVLKHSIEIAHLTSIMATELGADAKIAKRAGLLHDIGKALDHEIEGTHVEIGMDLLKRYKESEEVIHAMSTHHGDYEPRTVEAVLVTAADAISAARPGARGETLEAYIKRLEKLEEISNSFEGVDKSYAIQAGREVRILVKPDKIDDDYLPLLARNVKKQIEEQMEYPGQIKVSIIRETRAVDYAK
SIO_010081: HMPREF0389_RS00645
subclass of: SO_0000673
so part of: HMPREF0389_RS00645
location: 149398..150987
location: region:149398-150987:1
so has part: feature:149398-150987:1:exon

WP_014261809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149398-150987:1:exon

HMPREF0389_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00650
old locus tag: HMPREF0389_00502
so part of: sequence
location: complement(151285..152022)
location: region:151285-152022:-1
so has part: feature:151285-152022:-1:exon
subclass of: SO_0000010

position:151285:-1
position: 151285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152022:-1
position: 152022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151285-152022:-1:exon

HMPREF0389_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00650
old locus tag: HMPREF0389_00502
EC number: 2.3.1.286
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011987178.1
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0070403 - NAD+ binding [Evidence IEA]; GO:0034979 - NAD-dependent protein deacetylase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent protein deacylase
translation: MMNPEMEKFYSMIKNSNNIVFLGGAGVSTESNIPDFRSNTGLYNMHIGNFSAEEILSSPFFFEHTKEFYEFYNDKMIYKDAKPNNAHLALAKLEELGKLKAIITQNIDGLHQLAGSRNVLELHGSVLHNHCTGCGKYYSLDDIYPISDIPFCKDCGNIIKPDVTLYQEALNMSVFEKAIYYIEHTDILIVGGTSLVVYPAASLVRYYKNNKLVLINRDETTYDSMANLIFRDSIGDVLSRIVSQL
SIO_010081: HMPREF0389_RS00650
subclass of: SO_0000673
so part of: HMPREF0389_RS00650
location: complement(151285..152022)
location: region:151285-152022:-1
so has part: feature:151285-152022:-1:exon

WP_041250732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151285-152022:-1:exon

HMPREF0389_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00655
old locus tag: HMPREF0389_00501
so part of: sequence
location: 152259..152696
location: region:152259-152696:1
so has part: feature:152259-152696:1:exon
subclass of: SO_0000010

position:152259:1
position: 152259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152696:1
position: 152696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152259-152696:1:exon

HMPREF0389_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00655
old locus tag: HMPREF0389_00501
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKHRTILAGVFLPVGIMLSSCNQNATDVDSNIISPDKSESTENKVDISHGKFKGTSLGPEYSLQQSDGKYVIFWVENVGDNKVNVSIDESDLVIKQGEEGTLVKEVSKKQQDFKFKIGPTADYGGEINVRYKIWQSNTKSMEKTF
SIO_010081: HMPREF0389_RS00655
subclass of: SO_0000673
so part of: HMPREF0389_RS00655
location: 152259..152696
location: region:152259-152696:1
so has part: feature:152259-152696:1:exon

WP_014261811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152259-152696:1:exon

HMPREF0389_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00660
old locus tag: HMPREF0389_00500
so part of: sequence
location: 152920..154002
location: region:152920-154002:1
so has part: feature:152920-154002:1:exon
subclass of: SO_0000010

position:152920:1
position: 152920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154002:1
position: 154002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152920-154002:1:exon

HMPREF0389_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00660
old locus tag: HMPREF0389_00500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262305.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MEYNNTTANSRKNKHLNDFERGQIQLLHNKGYSAYKIAKELRRASNTIRNELKRGTVTQIKGIHDVQVYYPDTGKLVYEKNRKNCKKKFKALKCSKYLDFVKQKFNEEKWSLDAICGYAKLNKLYEGQRVCTKTLYNYVDIGLIGIKSIDLPLRVKRKPAKKRVKENKRKLGKSIEERPQEIETRKTFGNWEIDTVIPKKNKEEASLITITERKSRMELILKLNRRKASIVNETLKNTLNRLKEPQKIFRSITSDNGLEFAKLCELEKTYIGNIYYCHPNNPQERGTNEKHNSLIRRFLPKGKSLNDYEEEHYIKIMNWMNNLPRKILNYRTPIEVFIEELNNLGLLDDNEELVQFDIAI
SIO_010081: HMPREF0389_RS00660
subclass of: SO_0000673
so part of: HMPREF0389_RS00660
location: 152920..154002
location: region:152920-154002:1
so has part: feature:152920-154002:1:exon

WP_049770186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152920-154002:1:exon

HMPREF0389_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: purE
locus tag: HMPREF0389_RS00665
old locus tag: HMPREF0389_00499
so part of: sequence
location: 154245..154730
location: region:154245-154730:1
so has part: feature:154245-154730:1:exon
subclass of: SO_0000010

position:154245:1
position: 154245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154730:1
position: 154730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154245-154730:1:exon

HMPREF0389_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: purE
locus tag: HMPREF0389_RS00665
old locus tag: HMPREF0389_00499
EC number: 4.1.1.21
EC number: 5.4.99.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013360556.1
GO component: GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO function: GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-(carboxyamino)imidazole ribonucleotide mutase
translation: MKIAIVMGSVSDYDKVKEACEFLNMLEVPFEIRALSAHRTSVELDSFIEKYDDEIDVYIAAAGKAAHLPGVIAAKTCKPVIGIPIKSSALEGMDALLSIVQMPPGVPVATVAINGSKNAAILACQILSLKYAELADKMKKYKKDMETDTLRKEKEFLDSIR
SIO_010081: HMPREF0389_RS00665
subclass of: SO_0000673
so part of: HMPREF0389_RS00665
location: 154245..154730
location: region:154245-154730:1
so has part: feature:154245-154730:1:exon

WP_014261813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154245-154730:1:exon

HMPREF0389_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: purF
locus tag: HMPREF0389_RS00670
old locus tag: HMPREF0389_00498
so part of: sequence
location: 154795..156147
location: region:154795-156147:1
so has part: feature:154795-156147:1:exon
subclass of: SO_0000010

position:154795:1
position: 154795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156147:1
position: 156147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154795-156147:1:exon

HMPREF0389_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: purF
locus tag: HMPREF0389_RS00670
old locus tag: HMPREF0389_00498
EC number: 2.4.2.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013360558.1
GO function: GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidophosphoribosyltransferase
translation: MAGILGIKSTQNVSRKLFYGLNSLQHRGQEGCGIAVNTGEDIVRVRHSGLVIDSMKEDVLDSTTGNIGIGNVRYAMASTSVNATGEPFFGFTKGEKLSIVNDGSLINHQLLRTRLEEEGMMFQTNSDTEVILYLIARYYDGDIIKAVKKAASYLEGAYSFILMYQDKLIAVRDPNGFRPLVMGHKNGEYIFASENAAGDILGMTFDRDVTPGEIVVTGENGFVSHRLKDKEEKHSFCIFEHVYLARNDANLEEVNAYLFRWRTGKILYEESPVDVDLVVPVPDSGYPAAIGYSQASAIPLGEGLVKNRYMGRTFIKPTQEEREIAVRLKLNPQYHVVKGKKIVLVDDSIVRGTTSRNLIQNLRDAGATEVHVRITSPPVEYPCYYGIDTPSRNNLIASQHSVEEIKEIIGADSLSFISLDGLYRASDLENRDIFCNACFTGNYNVDPCLL
SIO_010081: HMPREF0389_RS00670
subclass of: SO_0000673
so part of: HMPREF0389_RS00670
location: 154795..156147
location: region:154795-156147:1
so has part: feature:154795-156147:1:exon

WP_014261814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154795-156147:1:exon

HMPREF0389_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: purM
locus tag: HMPREF0389_RS00675
old locus tag: HMPREF0389_00497
so part of: sequence
location: 156210..157256
location: region:156210-157256:1
so has part: feature:156210-157256:1:exon
subclass of: SO_0000010

position:156210:1
position: 156210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157256:1
position: 157256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156210-157256:1:exon

HMPREF0389_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: purM
locus tag: HMPREF0389_RS00675
old locus tag: HMPREF0389_00497
EC number: 6.3.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012158415.1
GO function: GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylformylglycinamidine cyclo-ligase
translation: MKKITYADSGVDITEGNRAVELMKAKVKETYTNGVVGDIGLFAGGFSLGNMSGMEEPVLLASTDGVGTKIMIAQQMDVHDTVGIDLVAMCVNDLICQGAKPLFFLDYVATGNVQAEKIATIVGGIADGCKESLCALIGGETAEMPGLYSKDEYDLAGFSVGIVDKKKMIDGSTIQEGDIVIGLASTGLHSNGYSLARKLFLETLNLKLDDVYEGMSEAIGKALLRPTRLYVKTILDLISEFNIKGISNITGGGLIENVPRILPKDVDVVIDTESWEYPEIFEVIRRLDMVEKNEMYRSLNMGVGMVLIVPKEESSQIIDWIHNNTQDRAYAIGSVVKGEQKCRLQFGE
SIO_010081: HMPREF0389_RS00675
subclass of: SO_0000673
so part of: HMPREF0389_RS00675
location: 156210..157256
location: region:156210-157256:1
so has part: feature:156210-157256:1:exon

WP_014261815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156210-157256:1:exon

HMPREF0389_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: purN
locus tag: HMPREF0389_RS00680
old locus tag: HMPREF0389_00496
so part of: sequence
location: 157232..157831
location: region:157232-157831:1
so has part: feature:157232-157831:1:exon
subclass of: SO_0000010

position:157232:1
position: 157232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157831:1
position: 157831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157232-157831:1:exon

HMPREF0389_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: purN
locus tag: HMPREF0389_RS00680
old locus tag: HMPREF0389_00496
EC number: 2.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017210865.1
GO function: GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylglycinamide formyltransferase
translation: MSSSVRRIAVFVSGGGTNLQSLLDAEQDKFFQSKICLVISNREDAYALERAKNYNVPAFVLKSENEILDKLSEYDIDTIVLAGYLRILGTTLLKEYQDRIINIHPSLLPKYGGKGMYGLNVHRAVFEHKEKESGATVHFVNETVDGGKILIQESISIEGAMSPEEIQKIVLDVEHRILKEAILKLEEENLEESIIKCYR
SIO_010081: HMPREF0389_RS00680
subclass of: SO_0000673
so part of: HMPREF0389_RS00680
location: 157232..157831
location: region:157232-157831:1
so has part: feature:157232-157831:1:exon

WP_041250733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157232-157831:1:exon

HMPREF0389_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: purH
locus tag: HMPREF0389_RS00685
old locus tag: HMPREF0389_00495
so part of: sequence
location: 157797..159323
location: region:157797-159323:1
so has part: feature:157797-159323:1:exon
subclass of: SO_0000010

position:157797:1
position: 157797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159323:1
position: 159323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157797-159323:1:exon

HMPREF0389_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: purH
locus tag: HMPREF0389_RS00685
old locus tag: HMPREF0389_00495
EC number: 2.1.2.3
EC number: 3.5.4.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014256141.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
translation: MLKRALLSVTDKSGIGAFAKELEDLGYEIISTGGTLKTICDYGVNAKSIEEVTEFPEMLDGRVKTLHPMIHGGLLYRRDLPEHVKTVEEYGIHPIDIVVVNLYAFEDSLKNKKPHAEMIENIDIGGPSMVRSAAKNYKDVLIVTDPSDYDRVVELLKNGLVDMKFREEMAMKAFSLTAYYDSMIARYFASYTGKQSNTFTIGLKEDSTLRYGENPHQRAMLYSDNFVDGLLSDYEQLHGKELSFNNLNDLNIAVELAQSFVKDGVTVTVALKHATPCGVGMGESVYDSYNKAYQADPLSIFGGIVACTGTIDLDTAKLMNEIFLEIVCAPDFTEEALEELKKKKNLRILKIDFSKETLDMDLKYINGKVLIQDRDFVEKEGFDIVTIKEPTAQEKQDMLFGMKVCQYVKSNAIVLVKNGVTMGIGGGQTSRIWALNSIRSNHPDRDFQGCVLVSDAFFPFSDCVELAKEMGVTAIIQPGGSIRDQDSIDKCNEFNMSMVFTGIRHFKH
SIO_010081: HMPREF0389_RS00685
subclass of: SO_0000673
so part of: HMPREF0389_RS00685
location: 157797..159323
location: region:157797-159323:1
so has part: feature:157797-159323:1:exon

WP_156775217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157797-159323:1:exon

HMPREF0389_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00690
old locus tag: HMPREF0389_00494
so part of: sequence
location: 159433..164388
location: region:159433-164388:1
so has part: feature:159433-164388:1:exon
subclass of: SO_0000010

position:159433:1
position: 159433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164388:1
position: 164388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159433-164388:1:exon

HMPREF0389_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00690
old locus tag: HMPREF0389_00494
EC number: 6.3.5.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019214749.1
GO function: GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
GO process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylformylglycinamidine synthase
translation: MNILIVGSGAREHAIGYKIHIDNPDDKLYFAPGNAGCSMIGECVDILATDKGKIVDFAKNNKIDFVVIGPEDPLCEELADALESEHIKVFGVKKESARLEESKAYAKEFMNQHNMPTAKYKKCTTKEEAVAYARELRTNNPSKTVVLKADGLCQGKGVVIAENDTMIESYCSDIFDKKIFGETSLVVEEYLDGFEISQLCFVDNHTIVAMPTVKDHKKIYEGEKGDNTGGMGTYSPNLQGDAYYSEIEEKIMKPFMEGLKKENLDFRGVIFFGLMVTTDGVKVLEFNTRFGDPETQSIMLRLDTNLMDIFVAVSENKLNEVKPVFNDKKVITTVMASNGYPKKYEKGAVIEGLDKVDEDVTVFHAGTSYKDGKIVTNGGRVLSISTAQDDFETAYDKVYDTISKITFDGAVYRKDISPLVKRVYVAKKDNYDIESEPLKKELEESLKITIPRLKIYQRYDIQNLTDEEIRRISRTILSESPVDDIYLFDDALQLEKRLGQSIVVKYHRGQFDQREQGLIEAVAVAIEKDDVLARSEKVYFFEGDFSESEWKQIESLLINPVDQQKGKLLGIPTTLEDQFETEINNEIYEGFIEYTESQLKEFFHEKSLAMSFEDLLCIYHYFKEEKRNPSHTELDMLDTYWSDHCRHTTFQTILEDVHFPQVKNKLDELVQQAYEDYLNTRTELNRTKPVTLMDLATIVARYMRANGSLEDLEVSEEINACSIKVKVRVGNELEDYLLMFKNETHNHPTEIEPFGGAATCLGGAIRDPLSGRAYVYQAMRVTGSADPRESLEETLPGKLPQRKITQGAAKGYSSYGNQIGLTTGLVDEIYHEGYKAKRMEVGAVIAAAPAENVKREEPVKGDVILLLGGKTGRDGVGGATGSSKVHTADSITTSSAEVQKGNAPTERKIQRLFRNPDAAKMIKKCNDFGAGGVSVAIGELADSLEIHLENVPLKYLGLTPREIAISESQERMAVVLDAREVDRFMNLCYQENLEVTKVAEVTDTGRLIMKYNDMVIVDLSREFLNSAGASRRQSIKVESVQEQDFFKPELPEGSLQEQLEQAMSDLNRCSKKTLVERFDSSIGKNTVLSPLGGEFQITPSQAMVAKIPSLKGNVSTVSIMSYGFDPYLSEKSTFLGAYYAVVESLCKIAAVGANALLSRLSFQEYFEKLGEEDTKWAKPFMALLGAYKITKELNIPPIGGKDSMSGTFHHLSVPPTLISFAVATEDIEQIISTELKGNAKLGLLVTDRTEEGVLDIDSFKRNLETLRNGIKDKNIISCNAITHKGSLPLLLEMAMGNNIGIDVSYDESLFYEKLFGSFVIEYKDEIDGVENIGISSITNSDWIVNGEKLKKEKISYAYRNTLEKVFSPEIPTDDSVKLSDIKPTEKSVRKSTKPVDVPKVIIPVFPGTNCEYDSANAFEQVGAKAEIFILNNLSIEDMKKSIDELARKISESQILFIPGGFSLGDEPDGSGKFIASVIRNPKIAEAINHLLTENDGLILGICNGFQALIKTGLLPHGKICDVEETSPTLTYNNIGRHIARMVDTKVVSMTSPWLSHVDEKQIYRIPISHGEGRFICTEEMLNSLKENGQIAFAYLDNPNGSVANIEGITSPDGKILGKMAHSERVENDLYKNIPNMEKQQLFRSGVEYFLK
SIO_010081: HMPREF0389_RS00690
subclass of: SO_0000673
so part of: HMPREF0389_RS00690
location: 159433..164388
location: region:159433-164388:1
so has part: feature:159433-164388:1:exon

WP_014261818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159433-164388:1:exon

HMPREF0389_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00695
old locus tag: HMPREF0389_00493
so part of: sequence
location: complement(164647..165840)
location: region:164647-165840:-1
so has part: feature:164647-165840:-1:exon
subclass of: SO_0000010

position:164647:-1
position: 164647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165840:-1
position: 165840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164647-165840:-1:exon

HMPREF0389_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00695
old locus tag: HMPREF0389_00493
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005541674.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxal phosphate-dependent aminotransferase
translation: MKFSNRITSMQASPIRRLVPYAEKARKAGKKVYPLNIGQPDIKTPPAFFEALGNFNKKVLAYDGSQGNPELIKAISNYYKTYNMDFQDDEILITNGGSEALLFAIIATCDAGDEVLVPEPFYTNYNGFASAVNVTVDGITTKAEEGFHLPKKEDLVKKIKPNTKSIILSNPGNPTGVVYTKDELKMLVDICIEHNLFILADEVYREFVYDGLEYISLGNFKEAEDRVIIIDSVSKRYSACGARIGSIASKNKDLIQEILKLCQGRLCVPTIEQIGAIELYKTPTDYFKEVNEEYTKRRDIVYGALQKMDGVICKEPKGAFYVSVKLPVDNAEKFIIWCLEEFDYNGETLMMAPLEGFYSTPGIGEDEARIAYILNTEELQKAMTVLDKALQAYPGRK
SIO_010081: HMPREF0389_RS00695
subclass of: SO_0000673
so part of: HMPREF0389_RS00695
location: complement(164647..165840)
location: region:164647-165840:-1
so has part: feature:164647-165840:-1:exon

WP_014261819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164647-165840:-1:exon

HMPREF0389_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00700
old locus tag: HMPREF0389_00492
so part of: sequence
location: 166069..166452
location: region:166069-166452:1
so has part: feature:166069-166452:1:exon
subclass of: SO_0000010

position:166069:1
position: 166069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166452:1
position: 166452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166069-166452:1:exon

HMPREF0389_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00700
old locus tag: HMPREF0389_00492
inference: COORDINATES: protein motif:HMM:NF012791.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein
translation: MENIMVCVTGQMQCKRLLSYALDLQKDKEQEVYLVHVSVTENKNFTDSMDALEYLYDQAVKNGASLSVLKPKTTILDTLVDFIKKNHVVSVVMGETREAISENSMIERLKKKAKESDMEIEIHIVKK
SIO_010081: HMPREF0389_RS00700
subclass of: SO_0000673
so part of: HMPREF0389_RS00700
location: 166069..166452
location: region:166069-166452:1
so has part: feature:166069-166452:1:exon

WP_014261820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166069-166452:1:exon

HMPREF0389_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: tnpA
locus tag: HMPREF0389_RS00705
old locus tag: HMPREF0389_01672
so part of: sequence
location: 166660..167130
location: region:166660-167130:1
so has part: feature:166660-167130:1:exon
subclass of: SO_0000010

position:166660:1
position: 166660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167130:1
position: 167130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166660-167130:1:exon

HMPREF0389_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: tnpA
locus tag: HMPREF0389_RS00705
old locus tag: HMPREF0389_01672
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004844952.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MSQQNNVNNSLAHTKWNCKYHVVFAPKYRRKVFYGEKKEAIRDIIRTLCQWKGVEIIEGEVCPDHIHLLLSIPPKISVSSFMGYLKGKSSLMIFQKYGNMKFAYRNREFWCKGYYVDTVGKNTKAIQEYISNQLKVDRESDQLSIFDPRDPFTGSK
SIO_010081: HMPREF0389_RS00705
subclass of: SO_0000673
so part of: HMPREF0389_RS00705
location: 166660..167130
location: region:166660-167130:1
so has part: feature:166660-167130:1:exon

WP_014261821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166660-167130:1:exon

HMPREF0389_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00710
old locus tag: HMPREF0389_00489
so part of: sequence
location: complement(167554..167988)
location: region:167554-167988:-1
so has part: feature:167554-167988:-1:exon
subclass of: SO_0000010

position:167554:-1
position: 167554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167988:-1
position: 167988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167554-167988:-1:exon

HMPREF0389_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00710
old locus tag: HMPREF0389_00489
inference: COORDINATES: protein motif:HMM:NF013629.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional repressor
translation: MNNNNEKNNIKMTKNRKIILETIDRYNAPITAEELFFVIKQSTSMSLSTVYRILGFLSDNGILLKNTGMDGKSCYQRNCVQHSHNLICKICNAVTTLPHCPMNEIEQSIHKKTGYAILSHNLEFVGICPKCQKNFEEQKNKSLL
SIO_010081: HMPREF0389_RS00710
subclass of: SO_0000673
so part of: HMPREF0389_RS00710
location: complement(167554..167988)
location: region:167554-167988:-1
so has part: feature:167554-167988:-1:exon

WP_014261822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167554-167988:-1:exon

HMPREF0389_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00715
old locus tag: HMPREF0389_00488
so part of: sequence
location: 168233..168595
location: region:168233-168595:1
so has part: feature:168233-168595:1:exon
subclass of: SO_0000010

position:168233:1
position: 168233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168595:1
position: 168595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168233-168595:1:exon

HMPREF0389_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00715
old locus tag: HMPREF0389_00488
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008703071.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MVSGKFDSNKDYIHTQEDIVEVLENTMPQEEVLYDLAELFKVFGDSTRIRILYVLFETEMCVYDLSKILNVTQSAISHQLRVLKQNKLVKFRREGKNIFYSLADEHVRTIINQGMEHIEE
SIO_010081: HMPREF0389_RS00715
subclass of: SO_0000673
so part of: HMPREF0389_RS00715
location: 168233..168595
location: region:168233-168595:1
so has part: feature:168233-168595:1:exon

WP_049770188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168233-168595:1:exon

HMPREF0389_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00720
old locus tag: HMPREF0389_01673
so part of: sequence
location: 168605..168823
location: region:168605-168823:1
so has part: feature:168605-168823:1:exon
subclass of: SO_0000010

position:168605:1
position: 168605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168823:1
position: 168823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168605-168823:1:exon

HMPREF0389_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00720
old locus tag: HMPREF0389_01673
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007488217.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation transporter
translation: MKKKLKLQNLGCVNCAMKMETEIKKLDGVQDASVNYMFQKLVIECDEDKFDSIFDSAKKICSNIEPDCVLIK
SIO_010081: HMPREF0389_RS00720
subclass of: SO_0000673
so part of: HMPREF0389_RS00720
location: 168605..168823
location: region:168605-168823:1
so has part: feature:168605-168823:1:exon

WP_014261824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168605-168823:1:exon

HMPREF0389_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00725
old locus tag: HMPREF0389_01674
so part of: sequence
location: 168848..170689
location: region:168848-170689:1
so has part: feature:168848-170689:1:exon
subclass of: SO_0000010

position:168848:1
position: 168848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170689:1
position: 170689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168848-170689:1:exon

HMPREF0389_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00725
old locus tag: HMPREF0389_01674
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009298679.1
GO function: GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MNQNQKKERNKIIIASVIFGIFLFTDINETIDFIKFLLLYLYIGWDILKKSFKNIINGNVFDENFLMSIATIGAFLLGEYHEALEVMIFYRVGELFQDYAMEQSRESIVELMNIAPEYATLKQGDEFVQVDPEDVSVGSIIMVKAGEKIPLDGRVVSGSSMLNTAALTGESKLKTVTEGDEVVSGCINVNHVLMIQSTKSYEDSTVSKIMELVESSYEKKAKTEKYITKFARYYTPFVVIFAVVLCLIPPVLFHQSFHTWIYRSLTFLVISCPCALVVSIPLSFFSGIGSGAHHGVLIKGGEYIERLSNLETIVFDKTGTLTEGNFKVEGLYSDSMPQELLWDYVVLSEVYCNHPIAISLREQYHGSIDYKRIKDYREFVGLGIVSQIDDKEICIGNEKLMRQEEVTIDNTILCNSNVVYIAIDHEYVGYILLEDKIKEDSPEVIDRIKSMGIKNIVIFTGDEEEISKSVAKSLGIENVCYELLPQDKVYHIEELLHSKSKNKFVGFVGDGINDAPVLSRVDVGISMGRLGSDAAIEASDVVLMDDNILKIPFAIELSKRTMLIIKENIIFSLGVKGIVLFLTAVGILGMQWAVFSDVGVSVLAILNAFRIKK
SIO_010081: HMPREF0389_RS00725
subclass of: SO_0000673
so part of: HMPREF0389_RS00725
location: 168848..170689
location: region:168848-170689:1
so has part: feature:168848-170689:1:exon

WP_014261825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168848-170689:1:exon

HMPREF0389_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00730
old locus tag: HMPREF0389_00486
so part of: sequence
location: complement(170752..171171)
location: region:170752-171171:-1
so has part: feature:170752-171171:-1:exon
subclass of: SO_0000010

position:170752:-1
position: 170752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171171:-1
position: 171171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170752-171171:-1:exon

HMPREF0389_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00730
old locus tag: HMPREF0389_00486
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013361576.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVKLFLGEAGSGKTKKMLEMANTEAETTTGEIVFIEPTPKHLHQLHRDIRFISTEEFQISCTNSVYGLLCGLISANYDINTIYLDSLDKIIPTIDESVVDFIELVDTLSEKREFTIIIAFNVDDSTHIEDKLKKYLPSI
SIO_010081: HMPREF0389_RS00730
subclass of: SO_0000673
so part of: HMPREF0389_RS00730
location: complement(170752..171171)
location: region:170752-171171:-1
so has part: feature:170752-171171:-1:exon

WP_014261826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170752-171171:-1:exon

HMPREF0389_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00735
old locus tag: HMPREF0389_00485
so part of: sequence
location: complement(171245..172576)
location: region:171245-172576:-1
so has part: feature:171245-172576:-1:exon
subclass of: SO_0000010

position:171245:-1
position: 171245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172576:-1
position: 172576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171245-172576:-1:exon

HMPREF0389_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00735
old locus tag: HMPREF0389_00485
EC number: 3.4.-.-
inference: COORDINATES: protein motif:HMM:NF012970.2
GO function: GO:0008236 - serine-type peptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-alanyl-D-alanine carboxypeptidase family protein
translation: MSKYNLKTKNLLFAVIIFFNTVFLHDIHAVATNTPSLGLNCSTAVLIEEETGKILYEKQKDVPVYPASTTKIMTALLTLEHLDLNQKITVPEDMGPADGSAMYLLPGETFTVEELLQGLLVKSANDAAILLAKNISGSVEEFSNLMNQRAQEIGCQNTHFVNPNGLHDPNHTTSAYDLALIAREAMKNPKFRELVSTDFVQIHATEQTPEIRYFRNTNKFLWSKQTIDYKGISTPIKYDVIDGIKTGYTPEAGKCLVSSGEKNGIRLIAVVMKNQGLEVYANSRKLLDYGFQNFTKKKIFTANEVAGTTVIVDSLEKNLDFYVKEDYYSIENINSKSEIEQEVFLNENIKFPIHVDEEIGTLKLKDNGVILEELPIFAKNEIHSVYSLQGFVHFSKNHKFLSVLTMVGIFIVLITIFAAVRLISKKRRRKRRRKLSHSSYRVQ
SIO_010081: HMPREF0389_RS00735
subclass of: SO_0000673
so part of: HMPREF0389_RS00735
location: complement(171245..172576)
location: region:171245-172576:-1
so has part: feature:171245-172576:-1:exon

WP_014261827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171245-172576:-1:exon

HMPREF0389_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00740
old locus tag: HMPREF0389_00484
so part of: sequence
location: complement(172768..173796)
location: region:172768-173796:-1
so has part: feature:172768-173796:-1:exon
subclass of: SO_0000010

position:172768:-1
position: 172768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173796:-1
position: 173796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172768-173796:-1:exon

HMPREF0389_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00740
old locus tag: HMPREF0389_00484
EC number: 3.-.-.-
inference: COORDINATES: protein motif:HMM:NF013672.2
GO function: GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide deacetylase family protein
translation: MNYKNTYSTSSHEVNTYTSVPKTSGRKKRKKYRLAKNIIILFIVAAFSLGIGKGIALIFSEKSTPLERSNQTTLYSRESLFVLSPVNRPTEMLEKTLNWKFSIVPDSNHIGAAQEYAYDTKEIRNYISGKTTYTGKDKLVFLTFDDGANQKISPIVLDTLKEHGVHGTFFIVGGTVGEKNKSVLLREIEEGHAIAIHSFTHNYKILYPNRVANVQHITKEYMDTLTAMKNIFGPSFNSKVFRYPGGHMSWKNMDAADTALSKYGVEWIDWNALCGDGEPRRTRPTSAQGMYDFTVKTTQQNKNQDVIVVLMHDAENKKFTAEALPQIIQYYKDQGYVFGVLK
SIO_010081: HMPREF0389_RS00740
subclass of: SO_0000673
so part of: HMPREF0389_RS00740
location: complement(172768..173796)
location: region:172768-173796:-1
so has part: feature:172768-173796:-1:exon

WP_014261828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172768-173796:-1:exon

HMPREF0389_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: obgE
locus tag: HMPREF0389_RS00745
old locus tag: HMPREF0389_00483
so part of: sequence
location: 173960..175243
location: region:173960-175243:1
so has part: feature:173960-175243:1:exon
subclass of: SO_0000010

position:173960:1
position: 173960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175243:1
position: 175243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173960-175243:1:exon

HMPREF0389_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: obgE
locus tag: HMPREF0389_RS00745
old locus tag: HMPREF0389_00483
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009531463.1
GO function: GO:0003924 - GTPase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase ObgE
translation: MFIDKAEIFIKAGNGGNGAVAFRREIYVPAGGPAGGDGGNGGNIIFRADANLRTLMDFKYKKSYQAPSGEDGKGSNMHGKSGENLVLKVPIGTIIRDKESGLVLADLKENGEEAIVAKGGRGGRGNTHFKTSTRQAPNFAKAGTEGQERTVTLELKLIADVGLIGFPNVGKSTFLSIVTKANPKIANYHFTTLTPNLGVVNLKNGTGFVIADIPGIIEGAHSGVGLGHDFLRHIERTRILLHVVDISGIEGRDPHDDFLKINEELHLYNEKLSKREQIVIANKMDLLFEKDRYHEFKNKIEKYGYKVFPLSGATKEGLDDILDYVSQRLLEIETEPLYTEEEMWSEEYQPVKLEEEEITIEKEKDAYVLSGVRLEKLLYSVNFDDMESIRYFQKIMENNGVFDRLRKMGIQDGDLVKMYDLEFEFYE
SIO_010081: HMPREF0389_RS00745
subclass of: SO_0000673
so part of: HMPREF0389_RS00745
location: 173960..175243
location: region:173960-175243:1
so has part: feature:173960-175243:1:exon

WP_014261829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173960-175243:1:exon

HMPREF0389_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: yhbY
locus tag: HMPREF0389_RS00750
old locus tag: HMPREF0389_00482
so part of: sequence
location: 175313..175600
location: region:175313-175600:1
so has part: feature:175313-175600:1:exon
subclass of: SO_0000010

position:175313:1
position: 175313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175600:1
position: 175600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175313-175600:1:exon

HMPREF0389_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: yhbY
locus tag: HMPREF0389_RS00750
old locus tag: HMPREF0389_00482
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003512219.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome assembly RNA-binding protein YhbY
translation: MITTKQRGFLRGLANKLEPVVLIGKGQVTEEVVESVDQVLEKRELIKVKIQENAYLDTKETAQKIAALLDADIVQCIGSKFVLYRKSKTNSKNLI
SIO_010081: HMPREF0389_RS00750
subclass of: SO_0000673
so part of: HMPREF0389_RS00750
location: 175313..175600
location: region:175313-175600:1
so has part: feature:175313-175600:1:exon

WP_014261830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175313-175600:1:exon

HMPREF0389_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: ligA
locus tag: HMPREF0389_RS00755
old locus tag: HMPREF0389_00481
so part of: sequence
location: 175622..177628
location: region:175622-177628:1
so has part: feature:175622-177628:1:exon
subclass of: SO_0000010

position:175622:1
position: 175622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177628:1
position: 177628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175622-177628:1:exon

HMPREF0389_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: ligA
locus tag: HMPREF0389_RS00755
old locus tag: HMPREF0389_00481
EC number: 6.5.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007285462.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent DNA ligase LigA
translation: MDAEKKIKLLRERLEYYSAKYYQEDAPEISDAEYDSMMKELMSLEKEHPSLRSAESPSEKVGGSYSKKFAEYVHRVPLLSLSNAFSYEELLEFDQKIRERCGDISYCVELKIDGLSVALEYKKGKFIHGATRGNGQQGENVTDNLNEIVTIPKELNQKVDLVVRGEVFLPKDRFLKLNEQQEDLGLPLFANPRNAASGSLRQLDSNITKDRNLDIFIFNVQEWMDNSDKEKEQELNSHSKQLNYLDDLGFKTISPREHCESMEKVIEFIKYWTEHREELLFDIDGIVIKVDELNKREILGQTAKAPRWAIAYKFPAEQKETTIEAITVQVGRTGVLTPIAELTPVLISGSTVSRATLHNEDYIAMKDIRVGDRVIVQKAGEIIPEVHAVMKDKRDGTEVVFHMPHTCPSCGAATQKIDGEVAVKCTNFACPAQLKRRMIHFVSKSAMDIDNFGPSIVSSLYENGLIKNIADIYLLKEKDLLQLNGFAKKSASNLISSINHSKSRNLNQLLVALGIDFVGEKAAKVLSKNFSSLEELEKANLDDLMRIEEIGLKTAQSILNYFQLEENRAVLERLVEYGVNTKSISGTDQNSSKVFSGKKFVLTGTLEGMKRSEAKKIIETCGGEVMSAVSTSVDYLLAGDSPGSKLKKAQELNIPILTKDEFLVMVNE
SIO_010081: HMPREF0389_RS00755
subclass of: SO_0000673
so part of: HMPREF0389_RS00755
location: 175622..177628
location: region:175622-177628:1
so has part: feature:175622-177628:1:exon

WP_014261831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175622-177628:1:exon

HMPREF0389_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: gatC
locus tag: HMPREF0389_RS00760
old locus tag: HMPREF0389_00480
so part of: sequence
location: 177677..177988
location: region:177677-177988:1
so has part: feature:177677-177988:1:exon
subclass of: SO_0000010

position:177677:1
position: 177677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177988:1
position: 177988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177677-177988:1:exon

HMPREF0389_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: gatC
locus tag: HMPREF0389_RS00760
old locus tag: HMPREF0389_00480
inference: COORDINATES: protein motif:HMM:TIGR00135.1
GO component: GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO function: GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
translation: MISGQSISMVIDKKVLDYMSHLSKLKIDDEKQEEMLESLEKILGYISSLEECDTENTEITYNVLGLENVMRDDTITPSFDREDILKNAPSKEAGCFIVPKVLS
SIO_010081: HMPREF0389_RS00760
subclass of: SO_0000673
so part of: HMPREF0389_RS00760
location: 177677..177988
location: region:177677-177988:1
so has part: feature:177677-177988:1:exon

WP_156775219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177677-177988:1:exon

HMPREF0389_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: gatA
locus tag: HMPREF0389_RS00765
old locus tag: HMPREF0389_00479
so part of: sequence
location: 178044..179501
location: region:178044-179501:1
so has part: feature:178044-179501:1:exon
subclass of: SO_0000010

position:178044:1
position: 178044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179501:1
position: 179501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178044-179501:1:exon

HMPREF0389_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: gatA
locus tag: HMPREF0389_RS00765
old locus tag: HMPREF0389_00479
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011878649.1
GO component: GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO function: GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
translation: MDLKNISIQDANCMLKKGECSVSELLTSSYDRIEKIDEEVKAFITLSKDVSEEQSLVAQKKFEEKTDTLLTGIPYSVKDNISTKGVKTTCASKMLENYIPIYDATVIEKLNTHMPIMVGKVNMDEFAMGGSTEKSAFFPTKNPFDTDYVPGGSSGGSAVSVASGEVLFSLGSDTGGSVRQPASYCGIVGVKPTYGRISRYGLVAFGSSLDQVGILTKNVADSAIVLNAISGKDSMDSTSADIQVDEYLNQLDGNIKGLRIGIIKDLFEDGIDVDVKGAVQNAIEKFEELGAICEIVDLKHIRHSIETYYIIAPSEASSNLSRFDGVKYGYRTENYSDLEEMYINTRSEGFGDEVKRRILLGTFTLSAGYYDAYYQKALKVRTLIKQDFVNAFKKYDLLLSPTAPNVAFRCGEKTNDPLSMYLEDLCTIPVNLAGLPAISIPCGRKGKLPIGLQLIGNYFKEGTMLKAADAFEKNTDYHKMVAELD
SIO_010081: HMPREF0389_RS00765
subclass of: SO_0000673
so part of: HMPREF0389_RS00765
location: 178044..179501
location: region:178044-179501:1
so has part: feature:178044-179501:1:exon

WP_014261833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178044-179501:1:exon

HMPREF0389_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: gatB
locus tag: HMPREF0389_RS00770
old locus tag: HMPREF0389_00478
so part of: sequence
location: 179514..180944
location: region:179514-180944:1
so has part: feature:179514-180944:1:exon
subclass of: SO_0000010

position:179514:1
position: 179514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180944:1
position: 180944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179514-180944:1:exon

HMPREF0389_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: gatB
locus tag: HMPREF0389_RS00770
old locus tag: HMPREF0389_00478
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014521861.1
GO function: GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
translation: MNYKTLIGIEIHVELLTKTKAFCGCKNEFGSEVNTNCCPVCVGMPGTLPVLNEQVLKYAIMAGLSTNCSIERNTKMDRKNYFYPDLTKGYQISQFDRPLCYEGYVEIEDEDGNEKKIRLIRIHMEEDTGKSIHDVSGDSLIDYNRAGVPLIEIVSYPDMNSPIEAYRYLENLKEILLFTGVSDVKMEQGSLRCDVNINVVREDGVKSNIVELKNLNSFKSALKAMEYEEKRHIELLEKGENSLKETRRWDEQNQVTISMRSKENVQDYRYFPEADIVDFVISEEYINDIRDSLPELPSEKRKRFIKEYGVTQADATILNSSKEISAYFEKLIALTEDKQVTTNFFLSEFLRRLKDSESTIGNEKFDINQFAFLLNQISQKKINNNMAKKIFRKMFEDGIDPKEHIEKEGLTQVQDEGFILDIVKEVLSQNPQSIDDLKNGKDRAFGFLVGQVMKQSKGKANPQIVNTLLKKEIDSM
SIO_010081: HMPREF0389_RS00770
subclass of: SO_0000673
so part of: HMPREF0389_RS00770
location: 179514..180944
location: region:179514-180944:1
so has part: feature:179514-180944:1:exon

WP_014261834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179514-180944:1:exon

misc_binding
type: Miscellaneous Binding Site
subclass of: SO_0000409
RO_0002162: 546269
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00230
inference: COORDINATES: profile:INFERNAL:1.1.4
note: T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: tRNA
so part of: sequence
location: 181011..181256
location: region:181011-181256:1
so has part: feature:181011-181256:1:region

position:181011:1
position: 181011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181256:1
position: 181256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181011-181256:1:region

HMPREF0389_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: asnA
locus tag: HMPREF0389_RS00775
old locus tag: HMPREF0389_00477
so part of: sequence
location: 181428..182441
location: region:181428-182441:1
so has part: feature:181428-182441:1:exon
subclass of: SO_0000010

position:181428:1
position: 181428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182441:1
position: 182441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181428-182441:1:exon

HMPREF0389_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: asnA
locus tag: HMPREF0389_RS00775
old locus tag: HMPREF0389_00477
EC number: 6.3.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008679354.1
GO function: GO:0004071 - aspartate-ammonia ligase activity [Evidence IEA]
GO process: GO:0006529 - asparagine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate--ammonia ligase
translation: MAVDKLILPEGYVNEFTVLETEIAIKKIKDLFQKTLAEKLKLTRVSAPLFVKTDSGLNDGLNGVERPVAFDMKDSGDNLEIVQSLAKWKRLALYRYGFSRNTGLYTDMNAIRRDEELDNIHSIYVDQWDWEKIIDEEDRTIEYLKDTVRTIYQVFLEVEDFLEKEHSFYKKALPSEIFFIDSEELRAKYPSLSSKEREYEITKEKGAVFIIGIGGMLADGSIHDSRAADYDDWKLNGDLLFYDEVLDLALELSSMGIRVDKVSLKNQLKEKNEEYKLKYDFHQKIQNQILPLTIGGGIGQSRICMFFLRKAHIGEVQVSIWPSEDKKLCAKNNIFLL
SIO_010081: HMPREF0389_RS00775
subclass of: SO_0000673
so part of: HMPREF0389_RS00775
location: 181428..182441
location: region:181428-182441:1
so has part: feature:181428-182441:1:exon

WP_014261835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181428-182441:1:exon

HMPREF0389_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00780
old locus tag: HMPREF0389_01675
so part of: sequence
location: 182505..183791
location: region:182505-183791:1
so has part: feature:182505-183791:1:exon
subclass of: SO_0000010

position:182505:1
position: 182505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183791:1
position: 183791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182505-183791:1:exon

HMPREF0389_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00780
old locus tag: HMPREF0389_01675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009524794.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine gamma-lyase family protein
translation: MDDRNIDFLRKNFGITEEILSFEKTAEEQIQHVFEQYQDIQKYNQYKVLNAMQKCRLSDTHFNWTTGYGYNDVGREKVEEIFSVVFETEDALVRSNIVNGTHALTLCLQGLLFPGDVMLSISSKPYDTLDKVIGISEDSHSLVSYGVRYKQVDFLEDGSFDRVSIEKVMRETPDLKMVYIQRSKGYSNRKSLSVEDIESIVTFVRSINRDVIIMVDNCYGEFLETREPTEVGVDIMAGSLIKNPGGGLALTGGYICGKKHLIDAVAKRLTSPSIGKECGLTFGMTRTILQGLFLAPSVVAGAVKGAIFCSKLFENQGYRTFPQSNDVRSDIIQAVQLNSAEEIIAFCKGVQEASPVDAFVSPEPWEMPGYDDPVIMAAGNFIQGSSIELSADAPIREPYTVFFQGGLTYEYSKIGSLLALKNIINLKK
SIO_010081: HMPREF0389_RS00780
subclass of: SO_0000673
so part of: HMPREF0389_RS00780
location: 182505..183791
location: region:182505-183791:1
so has part: feature:182505-183791:1:exon

WP_014261836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182505-183791:1:exon

HMPREF0389_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00785
old locus tag: HMPREF0389_00474
so part of: sequence
location: 183803..185722
location: region:183803-185722:1
so has part: feature:183803-185722:1:exon
subclass of: SO_0000010

position:183803:1
position: 183803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185722:1
position: 185722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183803-185722:1:exon

HMPREF0389_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00785
old locus tag: HMPREF0389_00474
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009530899.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine synthetase
translation: MNLNNTQIKNLLFTISKKNHSYREIINILTNHTEVQFVSFVAIDFSGNGTDEKIPVSTFIENIENLLTVGVQTDGSSVVLQNIATLDNAKVIILPDLEVDWCVDYNFRNLLEDEQTPVGTLRIPSFLVHNGKKVCSRSILQKAALKLKEDSMKFLKEHPTICEEMGMLSADEVESINLTSATELEFWVQTPEDTVDVEKLSASQRLKQQYWKRTDGIVRTALENTIYIMDLYGFDVEMGHKEVGGVTSPISVTGKSEHIMEQLEIDWKYDDEIHTCDKEHFIRHLVKDIFHMHKLEVTFRAKPIEGVAGSGKHVHIGVSCKLKNGERRNLFSHKDLTTRYTTSYGLSALMGILKNYEVINPFVAWTNDSINRLKPHFEAPICIVSSLGISPEIPSRNRSILIGLIKDFSNSLATRFELRSPSPHNNVYLILASCYQAIRDGLWNAAMNMSLEQLEKEFSKNEKEDGIYLEQGREYRSEKNIFEYYSEDERYRKFGIPPKTVYENLLHFQQFPDKLSVLKKDDIFTDEIIDSYASSILEKWVNQLSFHMIENNMKVVRSFSILHDNNQDISDLDIVNWTKINALRWELMKDSVDKKCLFSRIKNALLEKNYSYASDLQLEMDEKMALLKTLYTSYQKNIF
SIO_010081: HMPREF0389_RS00785
subclass of: SO_0000673
so part of: HMPREF0389_RS00785
location: 183803..185722
location: region:183803-185722:1
so has part: feature:183803-185722:1:exon

WP_014261837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183803-185722:1:exon

HMPREF0389_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00790
old locus tag: HMPREF0389_00473
so part of: sequence
location: complement(185871..189299)
location: region:185871-189299:-1
so has part: feature:185871-189299:-1:exon
subclass of: SO_0000010

position:185871:-1
position: 185871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189299:-1
position: 189299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185871-189299:-1:exon

HMPREF0389_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00790
old locus tag: HMPREF0389_00473
EC number: 6.4.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006440457.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0009374 - biotin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004736 - pyruvate carboxylase activity [Evidence IEA]
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate carboxylase
translation: METKKFKKVLVANRGEIAIRIFRALTELGIRTVGIYSKEDKYSLFRTKADESYLIGEDKGPIDAYLDMASIIQIAKDKNVDAIHPGYGFLSENPKFAQMCLDNGIEFIGPTPYTMLQMGDKISAKSVALECGVPTIPGHQKPIKNSLEAKDIAEKIGYPVILKAANGGGGRGMRIVNSVEEMENEFKNAMSESIKAFDSDVIFMEKYLHHPKHIEVQILGDKLGNIVHLFERDCSLQRRHQKVIEFAPSISLDESIKQKILSDSVKLAKYVNYISAGTMEFLVDQSGNYYFIEMNPRIQVEHTVTEMITGVDIVQSQILIAMGHPLNSSEININSQEDISIRGYSIQCRITTENPTANFMPDTGKISVYRSASGFGIRLDGGNGFTGSEISPYYDSLLVKTTSWDRTFHGAARKALRSIKEFRIRGVKTNVPFLINVLNHPTFLEGNCYTSFIEDTKDLFNIKGSKDRASKLMNFIGDIIVNEKYDPSISDIKIPKIKMDLSTNSKSSKQLFKEMGAKDFTQMIMNEKKLYITDTTMRDAHQSLFATRMRTYDMLQAAPYCNKIFRDTFSMETWGGATFDVAYRFLKESPWRRLEKLSESMPDVLQQMLLRASNAVGYKNYPDNVVSEFIKVSAKQGIDVFRIFDSLNWLENMKLPIETALNTGKIVEGTICYTSDILNPNNKKYPLEYYINKAKELEKTGIHILGIKDMAGLLKPYAAKKLISKLKKELHIPIHLHTHDTSGNSVATILMAAESGVDIADLTLESMSGLTSQPSLNAVVAALKNTDRDTGLDLEELNEVSNYFKEVRKIYKKFESELKTPSVEIYKYEIPGGQYSNLLPQTKSVGLEHKFEEVKEAYRQANLLLGDIIKVTPSSKIVGDLAIFMVKNNLTPENILTEGENLSFPDSVVEYFMGQIGQPDGGFPEELQKIVLKGKTPLTERPGLLLPEENFEKIKLHLNEKYRDIANERNILSYALYPKVYDDYCKHIDLYNDISNLPSTVFFYGLEKGQEIDVAIEDGKLLNICYTGYSDADENGMRSVYFELNGSAREVEILDRSVQTKKDSKRKADKSNPKHIASPIPGTIAEILVNPGDSIKKNQPLMIVEAMKMETTILAKTDGAISEILISQGDSVSDDELAMILK
SIO_010081: HMPREF0389_RS00790
subclass of: SO_0000673
so part of: HMPREF0389_RS00790
location: complement(185871..189299)
location: region:185871-189299:-1
so has part: feature:185871-189299:-1:exon

WP_014261838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185871-189299:-1:exon

HMPREF0389_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00795
old locus tag: HMPREF0389_00472
so part of: sequence
location: complement(189634..190824)
location: region:189634-190824:-1
so has part: feature:189634-190824:-1:exon
subclass of: SO_0000010

position:189634:-1
position: 189634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190824:-1
position: 190824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189634-190824:-1:exon

HMPREF0389_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00795
old locus tag: HMPREF0389_00472
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006440045.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: coenzyme F420-0:L-glutamate ligase
translation: MSRCVGTISRGIRTGIIREGDDLSSMVVNSLMEACESDNIKLNDRDVLGVTEAVLARAQGNYATVDQIACDVKEKFKNKHIGLIFPILSRNRFAICLKGIAKGVDKITLVLNYPSDEVGNHLISLDDLDREKINPYSDVLTEERYRDLFGYKAHVFTGVDYIEYYKELILSQNCEVEVILSNNPNTVLEHTKYVLNCDIHTRARTKRILLESGAEQVLSLDDIMNYSINGSGYNADYGLLGSNKSTEESVKLFPRNANEFVTEVQNKIKDATGKTLEVLVYGDGAFKDPVGKIWELADPVVSPGYTKGLDGQPNEIKLKYLADNDFASLKGEALKEAIVNSIQKKEKDLKGSMVTQGTTPRRLTDLIGSLCDLTSGSGDKGTPIVLIQGYFDNYAD
SIO_010081: HMPREF0389_RS00795
subclass of: SO_0000673
so part of: HMPREF0389_RS00795
location: complement(189634..190824)
location: region:189634-190824:-1
so has part: feature:189634-190824:-1:exon

WP_014261839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189634-190824:-1:exon

HMPREF0389_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: recJ
locus tag: HMPREF0389_RS00800
old locus tag: HMPREF0389_00471
so part of: sequence
location: 191109..193418
location: region:191109-193418:1
so has part: feature:191109-193418:1:exon
subclass of: SO_0000010

position:191109:1
position: 191109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193418:1
position: 193418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191109-193418:1:exon

HMPREF0389_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: recJ
locus tag: HMPREF0389_RS00800
old locus tag: HMPREF0389_00471
inference: COORDINATES: protein motif:HMM:TIGR00644.1
GO function: GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded-DNA-specific exonuclease RecJ
translation: MSSIWMERNDKTYIGEVDEGLGLLSAMIKNRGIEDVEEFLNPDEDSFIDPYLMKGMDETVTRLQFAMAHKEKIVIFGDYDVDGVSSTSILFRYFEEIGYEVGVYIPDRRKEGYGLNEEAIVHLKDLGYDLIITVDCGISAIKEVDLCNQLKMDIIITDHHQCPEQLPKAYAILNPHQSDCSYPFKELCGAGIALKLVQALKNSSITELMSYLEIAAVATIADLVPLLGENRSIVKFGLNSINQNKLNLGIQVLIDVAQLKKQQITSYNVGFQLAPRINAGGRLDSAMTGVLLLTTHSVDEAMRYAVILNEYNAQRQLIEQTMLEEAITMIESHEKHRNNNVIVVYEKGWNEGVIGIVSSRITERYGKPSFVFSIDENGIAKGSGRSISDFHLFHALQEISDCMLGFGGHSQAAGLSIRVENLNIFEQNINFVSEKYLTNQSFKKKFFFDSELKEEYLNLDFLNKVKQMEPFGIKNPTPLFLMKNVRIKQVGRIGKNQTHFRGQLNRYTILGFDFGELSDDILANSDKELDILCSIEENVYRDAVSLQLKLRDYKWIEQDDMIEDMIPLAECIIEEILKEESFFKNIAVWEKRDFDSNTLFLTSIPSILKQLKREQLYLDCATNQVKFISNIEKIFLKDYNNIIICDSLSKCIISHQNNLNFEKIYFFNFLSNPLKISKVFSFPQGKNISFLEKIERNQKIKISADIIENMALDRVLKMWIQILLLQKLEMVSFRYSSGNIFLEDLFIKNRKEDYLKILKKLESFLEVEY
SIO_010081: HMPREF0389_RS00800
subclass of: SO_0000673
so part of: HMPREF0389_RS00800
location: 191109..193418
location: region:191109-193418:1
so has part: feature:191109-193418:1:exon

WP_014261840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191109-193418:1:exon

HMPREF0389_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00805
old locus tag: HMPREF0389_00470
so part of: sequence
location: 193437..193955
location: region:193437-193955:1
so has part: feature:193437-193955:1:exon
subclass of: SO_0000010

position:193437:1
position: 193437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193955:1
position: 193955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193437-193955:1:exon

HMPREF0389_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00805
old locus tag: HMPREF0389_00470
EC number: 2.4.2.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002580734.1
GO function: GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0006168 - adenine salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenine phosphoribosyltransferase
translation: MDLKSKIRVIEDFPKKGISFKDITTLLKDGAAFREIVDTIAEDLREKNIDIVVGPEARGFMIAAAVAYALGAAFVPVRKPGKLPAETRTYEYDLEYGVDQLEVHVDAIYEGAKVAVVDDLLATGGTVSAVIKLIESLGGTVSQCEFLIELEELKGREKLQGYDIESFVKYPC
SIO_010081: HMPREF0389_RS00805
subclass of: SO_0000673
so part of: HMPREF0389_RS00805
location: 193437..193955
location: region:193437-193955:1
so has part: feature:193437-193955:1:exon

WP_014261841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193437-193955:1:exon

HMPREF0389_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00810
old locus tag: HMPREF0389_00469
so part of: sequence
location: 194021..196222
location: region:194021-196222:1
so has part: feature:194021-196222:1:exon
subclass of: SO_0000010

position:194021:1
position: 194021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196222:1
position: 196222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194021-196222:1:exon

HMPREF0389_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00810
old locus tag: HMPREF0389_00469
EC number: 2.7.6.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009526381.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0015970 - guanosine tetraphosphate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
translation: MLSALLDKIREYNSGADVSIVEKAYLHAYEGHKNQYRKSGEKYIIHPVEVAKILAELEMDMDTIAAGLLHDVLEDTDMTYEEMASEFGTTIADLVDGVTKLGQIKYQSKQEMQAENFRKMFFAMGKDIRVVLIKLADRLHNMRTMKYMPKEKAIEKSKETAEIYAPIANRLGIFRIKWEMEDLALRYLDPDGYRELTEKVSLKRQEREKYIESVIEQIEVKLEENDITCDIKGRAKHFYSIYKKMKYQDKTFEEIYDLMAVRIIVDNIKDCYGAVGLVHTIWKPIPTRFKDYIAMPKPNMYQSLHTTVVGPDGEPLEIQIRTWDMNRIAEFGIAAHWKYKERFSANGNSDGEMEKKLSWIRQMMEWQKEVSDPEEFMESLKIDLFANKVFVFSPRGDVLELPAGSCPLDFAYKVHSQIGNKCVGAKVNSRMVPIDYKLKTGDIVEIITSGNSNGPSRDWLNIVKSSGAKTKIRQWFKKEKREENIEKGRELLEKETKKLGYPINDFLKQKYISAATKTLTNGNVEDLYAALGYGGITINQIMPKLKEKFEEDNKELLLEQKALKEKQEAEKRANIPRKQSKSSIGIHVEGIDNILIRLAKCCNPVPGDEIVGYITKGRGVSVHRKDCTNVSLNDGKNNDKRVVVYWDSNDLTSKEFEAEIQIIAYDRKSLFMDITRLFTEEKVSLNGINAKTNKENVAVMNFVIQVSSVDKLRSIMSKLRKIEGVSDVRRAVQ
SIO_010081: HMPREF0389_RS00810
subclass of: SO_0000673
so part of: HMPREF0389_RS00810
location: 194021..196222
location: region:194021-196222:1
so has part: feature:194021-196222:1:exon

WP_014261842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194021-196222:1:exon

HMPREF0389_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: dtd
locus tag: HMPREF0389_RS00815
old locus tag: HMPREF0389_00468
so part of: sequence
location: 196244..196693
location: region:196244-196693:1
so has part: feature:196244-196693:1:exon
subclass of: SO_0000010

position:196244:1
position: 196244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196693:1
position: 196693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196244-196693:1:exon

HMPREF0389_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: dtd
locus tag: HMPREF0389_RS00815
old locus tag: HMPREF0389_00468
EC number: 3.1.1.96
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003517065.1
GO function: GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-aminoacyl-tRNA deacylase
translation: MRLVIQRVNHAGVQVSGKEIASCGKGLLVLLGVTHDDSMEDVEYCASKTLGLRIFEDEDEKMNLSIQDIHGEILVVSQFTLYGDIRKGRRPSFVNSAKPDKANELYEEYVKYLQKENILVSTGQFGADMKVELINDGPVTILVDSKKMF
SIO_010081: HMPREF0389_RS00815
subclass of: SO_0000673
so part of: HMPREF0389_RS00815
location: 196244..196693
location: region:196244-196693:1
so has part: feature:196244-196693:1:exon

WP_014261843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196244-196693:1:exon

HMPREF0389_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00820
old locus tag: HMPREF0389_00467
so part of: sequence
location: 196748..197374
location: region:196748-197374:1
so has part: feature:196748-197374:1:exon
subclass of: SO_0000010

position:196748:1
position: 196748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197374:1
position: 197374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196748-197374:1:exon

HMPREF0389_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00820
old locus tag: HMPREF0389_00467
inference: COORDINATES: protein motif:HMM:NF012955.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MELKVFFQNHYQINSYVLYDPETKKAYVIDPGLNGSALIQFLKGNNLNVEMIFLTHGHGDHISDVPMILEHYDAKIYAHRADSVLFESAEKNHSPLISGKFTEFKIDFFVDEGDSITLGKKHMDVIHTPGHTKGGVCFHFENMLFTGDTLFKGSIGRTDLFGGNYDELLNSLLHIAKLDGETIIYPGHGPGTVLRKELLTNPFYKGLI
SIO_010081: HMPREF0389_RS00820
subclass of: SO_0000673
so part of: HMPREF0389_RS00820
location: 196748..197374
location: region:196748-197374:1
so has part: feature:196748-197374:1:exon

WP_014261844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196748-197374:1:exon

HMPREF0389_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: aspS
locus tag: HMPREF0389_RS00825
old locus tag: HMPREF0389_00466
so part of: sequence
location: 197399..199177
location: region:197399-199177:1
so has part: feature:197399-199177:1:exon
subclass of: SO_0000010

position:197399:1
position: 197399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199177:1
position: 199177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197399-199177:1:exon

HMPREF0389_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: aspS
locus tag: HMPREF0389_RS00825
old locus tag: HMPREF0389_00466
EC number: 6.1.1.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019595261.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate--tRNA ligase
translation: MDNICGLKRTNYCNDLTMSFVEKEVVLMGWVQRARDLGGLIFLDLRDRTGIVQVAFDINDSAENFSKAKELGSEYVIAIRGVVKERSSKNNNIATGDIEVFAKELRILNTAKTPPIYIKDDDIVSEDLRLKYRYLDLRKPKMQYNFLMRHKVTQSVRNFLSKEGFLEIETPILTKPTPEGARDYLVPSRVNKGHFYALPQSPQLFKQLLMTSGMDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEIDDVLDVTERLMKTVFHEVLNMEIQTPFKRMKWQEAMDRYGSDKPDIRFGFEINDVSDIVKDCGFKVFDEAVLSGGTVRAINLNGYEAEFSRKSIDALGETAKTYGAKGLAWMRVTESGINSPIAKFLSEDVLNSIVEKMGAKKGDLLLFVADKTMTALTSLGHIRLEAAKKLGVIDENEFAFLYVVEFPLYEYNEEENRYVAAHHPFTAPIDEDLKLFNSSPENMHAKAYDIVLNGIELGGGSIRIHTKDVQDKMFEALGFTKEEAEEKFGFLLNAFQYGTPPHGGIAFGLDRLLMLMLKRDNIREVIAFPKNQNAICPMTEAPAIADKNALQELGIELSARK
SIO_010081: HMPREF0389_RS00825
subclass of: SO_0000673
so part of: HMPREF0389_RS00825
location: 197399..199177
location: region:197399-199177:1
so has part: feature:197399-199177:1:exon

WP_014261845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197399-199177:1:exon

HMPREF0389_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00830
old locus tag: HMPREF0389_00465
so part of: sequence
location: complement(199366..200478)
location: region:199366-200478:-1
so has part: feature:199366-200478:-1:exon
subclass of: SO_0000010

position:199366:-1
position: 199366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200478:-1
position: 200478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199366-200478:-1:exon

HMPREF0389_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00830
old locus tag: HMPREF0389_00465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013360268.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine/ornithine racemase family PLP-dependent enzyme
translation: MQKKIQYPIMEINLNHLYENAKNIVEQCKKHGISVTGVVKGTDSYEHSYNTISNTLLDAGCTSIADSRMNTIIQMRNYGFEGRLLLLRVPMISELDDVVHYADCSLQSSLTVLEKTNETASKHNIIHDVILMMDLGDLREGFFDENELIHVASIVEKKMKHLHLKGIGTNLGCYGSIRPDTSNLGRLVSIAEKIEFHIGRKLEIISGGATSSLPLVLNGSIPKRINHLRVGEGIVLSRDLIDIWNIDMPFMHKDVYTISAEVIEVREKPSYPIGTIFVDAFGNKPEYIDKGIRKKALLAIGKRDVGSVDSLIVKLENAEIIGGSSDHLILDIEDVKEDIKEGDIISFDLYYGAMIFANNSSSVTKIYKRE
SIO_010081: HMPREF0389_RS00830
subclass of: SO_0000673
so part of: HMPREF0389_RS00830
location: complement(199366..200478)
location: region:199366-200478:-1
so has part: feature:199366-200478:-1:exon

WP_014261846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199366-200478:-1:exon

HMPREF0389_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00835
old locus tag: HMPREF0389_01676
so part of: sequence
location: 200763..201122
location: region:200763-201122:1
so has part: feature:200763-201122:1:exon
subclass of: SO_0000010

position:200763:1
position: 200763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201122:1
position: 201122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200763-201122:1:exon

HMPREF0389_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00835
old locus tag: HMPREF0389_01676
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNKKYGIFHKGLKKRTTSSEEYNSHYEMIDLASVEDGSVNETKNNSSAGSEDKYSFENKKESTGKPLVLQIRDCILNIFLKKNDRKKSFTNTRGNIRNKSYSGNDGVKAKYFLIPMFF
SIO_010081: HMPREF0389_RS00835
subclass of: SO_0000673
so part of: HMPREF0389_RS00835
location: 200763..201122
location: region:200763-201122:1
so has part: feature:200763-201122:1:exon

WP_014261847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200763-201122:1:exon

HMPREF0389_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00840
old locus tag: HMPREF0389_01677
so part of: sequence
location: 201260..201973
location: region:201260-201973:1
so has part: feature:201260-201973:1:exon
subclass of: SO_0000010

position:201260:1
position: 201260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201973:1
position: 201973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201260-201973:1:exon

HMPREF0389_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00840
old locus tag: HMPREF0389_01677
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKPDLIAHLGEPMGEGDGTEEETRFLRYEYEWFSLPTRSKIYYAREQRIYKAVITFRDIEFDDLQKRITDGVGEPVSVEESHEFKDVIWMKDSIKYWLTKTEEGELNLEVRLAYYENPEDLDLGYRPTIVQRSKTTDVTGDNKPDDVILIGSKRAYTQISYDHLYLLIISNGEIYTEDFPKDMDGGQYPQMRIETEKNKNEIVVESGNNFVLNQNVFVFENNKIKNISSTNEPIKK
SIO_010081: HMPREF0389_RS00840
subclass of: SO_0000673
so part of: HMPREF0389_RS00840
location: 201260..201973
location: region:201260-201973:1
so has part: feature:201260-201973:1:exon

WP_156775221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201260-201973:1:exon

HMPREF0389_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00845
old locus tag: HMPREF0389_00463
so part of: sequence
location: 201990..202541
location: region:201990-202541:1
so has part: feature:201990-202541:1:exon
subclass of: SO_0000010

position:201990:1
position: 201990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202541:1
position: 202541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201990-202541:1:exon

HMPREF0389_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00845
old locus tag: HMPREF0389_00463
inference: COORDINATES: protein motif:HMM:NF018627.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidase
translation: MNICIDIDGTMTVRDYYIPFFNCFFHKNIKFTQMVEYDLQKVYGVSEEQIIDFYQKCGHTMHASAGIQENVVKTLLKWQKNHDVSIVTARTPEMKEVTVNWLDKKGLGKVPLHLLGTSKKTEFAKLLKCDLFIEDHPEEIKRMANSGIRTLLMDNPYNQNITHKNIVRVNDWYEIEKIVDTMN
SIO_010081: HMPREF0389_RS00845
subclass of: SO_0000673
so part of: HMPREF0389_RS00845
location: 201990..202541
location: region:201990-202541:1
so has part: feature:201990-202541:1:exon

WP_014261849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201990-202541:1:exon

HMPREF0389_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00850
old locus tag: HMPREF0389_00462
so part of: sequence
location: 202581..203084
location: region:202581-203084:1
so has part: feature:202581-203084:1:exon
subclass of: SO_0000010

position:202581:1
position: 202581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203084:1
position: 203084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202581-203084:1:exon

HMPREF0389_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00850
old locus tag: HMPREF0389_00462
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAEKQQVLLNVLKATIYYFLVAICSNFILRSIYLYKVFPEVMYLFWILFISLGSTMHFVNNQIQRLISVSVPFLLNLIFIVYALSVSGNFPHLLSDGELYSWNYLHYLNLHFLLSPILMLKSMYYFRYLVILITPSILLYLGMSLSNILKCRYQDKINSISFKKMDD
SIO_010081: HMPREF0389_RS00850
subclass of: SO_0000673
so part of: HMPREF0389_RS00850
location: 202581..203084
location: region:202581-203084:1
so has part: feature:202581-203084:1:exon

WP_014261850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202581-203084:1:exon

HMPREF0389_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: proB
locus tag: HMPREF0389_RS00855
old locus tag: HMPREF0389_00461
so part of: sequence
location: 203119..204237
location: region:203119-204237:1
so has part: feature:203119-204237:1:exon
subclass of: SO_0000010

position:203119:1
position: 203119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204237:1
position: 204237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203119-204237:1:exon

HMPREF0389_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: proB
locus tag: HMPREF0389_RS00855
old locus tag: HMPREF0389_00461
EC number: 2.7.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012302941.1
GO function: GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
GO process: GO:0006561 - proline biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate 5-kinase
translation: MSKKAKRVVVKLGSSSLTYENGKLNLIQIEQLVRQIADLKNQGHDVLVVSSGAISAGMGYLNYSKRPKTLPEKQACAAIGQGKLLHLYEKLFCEYGYSVGQILLTKEDFADRERFLNSRSVLNELLSKNIIPIINENDAVVVSEIKFGDNDTLSALVSTLIEADLLIILSDIDGLFDKNPQVHKDAKLIEYVEKIDSKIESLAGDSISNVGTGGMRTKINAAKIATRSGVSVIIAKSNKQNVLNCILNGQKIGTFFVEEPHQLKLRKSWIAYNARGKGQIVIDLGAYQAIENNKSLLPSGIIEVRGEFRKGDVVDILFENKIIGRGLTYFDYDALNKIKGKHSEEIEDIIGTKDYDEVIHKDNLVRKEITIE
SIO_010081: HMPREF0389_RS00855
subclass of: SO_0000673
so part of: HMPREF0389_RS00855
location: 203119..204237
location: region:203119-204237:1
so has part: feature:203119-204237:1:exon

WP_014261851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203119-204237:1:exon

HMPREF0389_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00860
old locus tag: HMPREF0389_00460
so part of: sequence
location: 204230..205486
location: region:204230-205486:1
so has part: feature:204230-205486:1:exon
subclass of: SO_0000010

position:204230:1
position: 204230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205486:1
position: 205486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204230-205486:1:exon

HMPREF0389_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00860
old locus tag: HMPREF0389_00460
EC number: 1.2.1.41
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009167687.1
GO function: GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO process: GO:0006561 - proline biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate-5-semialdehyde dehydrogenase
translation: MNNLITQELKEMAKKARDAFAYLSIIGSEEKNIALKNIVDSLKQNREAILQANHLDVTKMRERGEKEALIERLALDSNKFESICIGILDIIKLNDPVYEVFDVIKRPNGLQIAKMYVPFGVIAMIYESRPNVTVDAAVMALKTSNVVILKGGKEAINTNLELVRAMREGLKKSGFPEDCILFVNRIEREYATQLMKLKGDIDLLIPRGGAGLIRSVVENATVPVIETGTGNCHLYVDAQAKIENALDIAYNAKVQRPGACNAIETILVHRDIAKEFLSKLKDRFYNRVHIKGDNGVKQILPSVEIATEEDFQKEFLDFIVAVKIVDSIDEAITHINLYGTKHSEIIVTEDYSNIIKFQKQVDAAVVYVNASSRFSDGGEFGFGAEIGISTQKFHARGPMGLKEIMTYKYVVIGEGQIR
SIO_010081: HMPREF0389_RS00860
subclass of: SO_0000673
so part of: HMPREF0389_RS00860
location: 204230..205486
location: region:204230-205486:1
so has part: feature:204230-205486:1:exon

WP_014261852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204230-205486:1:exon

HMPREF0389_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00865
old locus tag: HMPREF0389_00459
so part of: sequence
location: 205717..206517
location: region:205717-206517:1
so has part: feature:205717-206517:1:exon
subclass of: SO_0000010

position:205717:1
position: 205717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206517:1
position: 206517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205717-206517:1:exon

HMPREF0389_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00865
old locus tag: HMPREF0389_00459
inference: COORDINATES: protein motif:HMM:NF012797.2
GO function: GO:0008173 - RNA methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO process: GO:0001510 - RNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA methyltransferase
translation: MKEPTIIFSHNNAMFKLALSLNKQKFRKKHSLFLIEGTRAVLQAKENNITIKYIFVSDDFRKKRDDVWNEINCSMITEKYILDDNLFSKLSDTVASQGVIGMCEIPKYDAKSILSKEKSFILLLDQIQDPGNFGTIIRTSLAYGIDAIFFTKGSVDSFSPKVTRASMGGNLCLPLIEAEDGIDYFKKFRYTVYSASLSEKSVSYRDVNFESKVALILGNEGNGISADILNTSDYQIIIPIKEGMESLNVGVAAGILINEISYKLYG
SIO_010081: HMPREF0389_RS00865
subclass of: SO_0000673
so part of: HMPREF0389_RS00865
location: 205717..206517
location: region:205717-206517:1
so has part: feature:205717-206517:1:exon

WP_014261853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205717-206517:1:exon

HMPREF0389_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: asd
locus tag: HMPREF0389_RS00870
old locus tag: HMPREF0389_00458
so part of: sequence
location: 206536..207612
location: region:206536-207612:1
so has part: feature:206536-207612:1:exon
subclass of: SO_0000010

position:206536:1
position: 206536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207612:1
position: 207612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206536-207612:1:exon

HMPREF0389_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: asd
locus tag: HMPREF0389_RS00870
old locus tag: HMPREF0389_00458
EC number: 1.2.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198456.1
GO function: GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate-semialdehyde dehydrogenase
translation: MKKTRVGILGATGMVGQRFVSLLENHPYFEVVVLAASSNSSGMKYIDSVNDRWKLNQPIPEYAKNIIVEDVQNVDSVKEKVDLVFCALNMDKDEIIKIEELYAKSEVVVVSNNSAHRWTEDVPMLMPEINSHHLEAIQAQKDRLGTKKGFIIVKPNCSIQSYVPALNALKDFGLEKVVVSTYQAISGSGKNFSDWPEMVDNVIPFISGEEAKSELEPLKIWGTFDGKKFVNASEPIISAQCIRVPVLDGHLATVSVKFKEKPSKEEIIKRWKEYRSEIEKYRLPLSPNKFLTYFEEENRPQTKLDRDLYNGMGISIGRLREDNIYDYKFVCLSHNTLRGAAGGALLGAELLKAKGLLD
SIO_010081: HMPREF0389_RS00870
subclass of: SO_0000673
so part of: HMPREF0389_RS00870
location: 206536..207612
location: region:206536-207612:1
so has part: feature:206536-207612:1:exon

WP_014261854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206536-207612:1:exon

HMPREF0389_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: tnpA
locus tag: HMPREF0389_RS00875
old locus tag: HMPREF0389_01678
so part of: sequence
location: complement(207734..208204)
location: region:207734-208204:-1
so has part: feature:207734-208204:-1:exon
subclass of: SO_0000010

position:207734:-1
position: 207734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208204:-1
position: 208204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207734-208204:-1:exon

HMPREF0389_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: tnpA
locus tag: HMPREF0389_RS00875
old locus tag: HMPREF0389_01678
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004844952.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MSQQNNVNNSLAHTKWNCKYHVVFAPKYRRKVFYGEKKEAIRDIIRTLCQWKGVEIIEGEVCPDHIHLLLSIPPKISVSSFMGYLKGKSSLMIFQKYGNMKFAYRNREFWCKGYYVDTVGKNTKAIQEYISNQLKVDRESDQLSIFDPRDPFTGSK
SIO_010081: HMPREF0389_RS00875
subclass of: SO_0000673
so part of: HMPREF0389_RS00875
location: complement(207734..208204)
location: region:207734-208204:-1
so has part: feature:207734-208204:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207734-208204:-1:exon

HMPREF0389_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00880
old locus tag: HMPREF0389_00455
so part of: sequence
location: complement(208379..208609)
location: region:208379-208609:-1
so has part: feature:208379-208609:-1:exon
subclass of: SO_0000010

position:208379:-1
position: 208379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208609:-1
position: 208609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208379-208609:-1:exon

HMPREF0389_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00880
old locus tag: HMPREF0389_00455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009525782.1
GO function: GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutaredoxin domain-containing protein
translation: MKHVTIYTSPTCHFCHQAMDYLKEKNVEFEAKDISKDPEARKFLMSQKIMGVPAIYIDEELVMGFDKQKIDALLGL
SIO_010081: HMPREF0389_RS00880
subclass of: SO_0000673
so part of: HMPREF0389_RS00880
location: complement(208379..208609)
location: region:208379-208609:-1
so has part: feature:208379-208609:-1:exon

WP_014261855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208379-208609:-1:exon

HMPREF0389_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: hprK
locus tag: HMPREF0389_RS00885
old locus tag: HMPREF0389_00454
so part of: sequence
location: 208844..209797
location: region:208844-209797:1
so has part: feature:208844-209797:1:exon
subclass of: SO_0000010

position:208844:1
position: 208844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209797:1
position: 209797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208844-209797:1:exon

HMPREF0389_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: hprK
locus tag: HMPREF0389_RS00885
old locus tag: HMPREF0389_00454
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013360767.1
GO function: GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HPr(Ser) kinase/phosphatase
translation: MVKKYDESQISIKQMIVDLNIDIITMPEDMDYTLYTSDINRPGIQLAGFYGYFPSDRIQIIGQVEYAYLMSLNENAQKEVLEKYLSYRMPAIFMTRGQKPSESFVKIAKKYNQYLLISELSTKQLVNKLVTYINEIITPKEVVHGGLLDVDGVGILIKGKSGIGKSETALELIRRGHRLISDDVVEIRKSEDGILVGTSPKITKNLMEIRGIGLLDIQNLFGVGAVKQSKAIDMIVYLESWEDGRYYDRLGIDSEYEDIFGISINKIIMPVRPGRNIATIIEVAARNFRQKLLGYNVAKAFDEKLIEELSIKKQDNR
SIO_010081: HMPREF0389_RS00885
subclass of: SO_0000673
so part of: HMPREF0389_RS00885
location: 208844..209797
location: region:208844-209797:1
so has part: feature:208844-209797:1:exon

WP_014261856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208844-209797:1:exon

HMPREF0389_RS08670
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS08670
old locus tag: HMPREF0389_00453
so part of: sequence
location: 209826..211160
location: region:209826-211160:1
so has part: feature:209826-211160:1:exon
subclass of: SO_0000010

position:209826:1
position: 209826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211160:1
position: 211160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209826-211160:1:exon

HMPREF0389_RS08670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS08670
old locus tag: HMPREF0389_00453
inference: COORDINATES: protein motif:HMM:NF025112.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: [cytidine(C)-cytidine(C)-adenosine (A)]-adding enzyme
translation: MERLLSNEVKEIFQILQENGHQVYLVGGIVRDYFLNRENYDFDMATSATPTEMISLLKHFDLDATDSRFGTIRIKVAGKNDIEITTFRMEEYEDETRYPTKIDFVNDILIDLKRRDFTMNALAWNHKGLIDCFHGLEDIRQSCIKTIGVPTKRFLEDPLRMLRAIRFSAQLDFRIDEDSYQAIVENAYLISRLSMESMRNEFVKILISNNPNYAIKCLFDSNIVEYIFFDSDIEWDRIYLQIRENNCKILFLLQRLSRLPCQLEVRLSAFLYHLFSCSLESKKEVAGKLISIEQLSEKLLKRLKFSKRMISRVCNIIKYYPIEEYISAQTNINRLICAAGEDCWKNIMDIRIQYFSYLGVQDGCYEILDRIRKRMKENSIIHKKQLCVTGNDMISLGYKGKEIGKIIDVLYDAVIEGNLKNTRVSLMKRAADMMSSIKADFTEE
SIO_010081: HMPREF0389_RS08670
subclass of: SO_0000673
so part of: HMPREF0389_RS08670
location: 209826..211160
location: region:209826-211160:1
so has part: feature:209826-211160:1:exon

WP_014261857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209826-211160:1:exon

HMPREF0389_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00895
old locus tag: HMPREF0389_00452
so part of: sequence
location: 211199..213376
location: region:211199-213376:1
so has part: feature:211199-213376:1:exon
subclass of: SO_0000010

position:211199:1
position: 211199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213376:1
position: 213376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211199-213376:1:exon

HMPREF0389_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00895
old locus tag: HMPREF0389_00452
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013360774.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UvrD-helicase domain-containing protein
translation: MDIAELNKEQLDAVQTAGGNMLILAGAGSGKTRVITYRIAYLINHGVSPSNILALTFTNKAANEMKDRLSSILSEEFSPSWIGTFHSICLRILRMNIEKVNYKKEFVIYDTYDQTAIIKDCMKQLNISPKIKPSFFLSKISDFKNRFKSPNECGLDKEKDSSSIQIQEIYDMYQKRLYSANAIDFDDIIFYTVKILEEYEEISFFYQGKFKHILVDEYQDTNYLQYRFIKILSEKHQNLCVVGDDDQSIYRWRGADVRNILEFEKDHKDTKIIKLEQNYRSTQTILNVAYDVISKNIGRMNKKLWTENGTGELIILKKLYSEKEEGAWVANQIKELVDKFDYSLDEIAVLYRANAQSRAIEDAFVLKDMPYQVFGGIKFYDRKEIKDLLAYLRLISNTSDISSFRRIINIPKRGIGIKTIEKIEFNALSDSKTVYEYLLSDELLDFSVKVRKNLKNLISMMETFRSMSELIPLDELIETILDHTGYRKELEEEKTEEANNRLENLREFLSVAKDFYQTKEKEEGLSDFLFGLSLATEQDEDETEGKVSLMTLHSAKGLEFRAVFIVGMEEGLFPISRAVYDEYELEEERRLCYVGITRAKEKLYLTYTGERMIYGKTEKRVISRFVKDINSKYISGNLHDSLEQGKTLSLYQKYREKYKVGLETKKKDDSFPQDAQKISLGSKVKHKVFGIGTVVAREEGVYTIVFDSKGIKKIDTKYVNLEVLS
SIO_010081: HMPREF0389_RS00895
subclass of: SO_0000673
so part of: HMPREF0389_RS00895
location: 211199..213376
location: region:211199-213376:1
so has part: feature:211199-213376:1:exon

WP_014261858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211199-213376:1:exon

HMPREF0389_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: dut
locus tag: HMPREF0389_RS00900
old locus tag: HMPREF0389_00451
so part of: sequence
location: 213511..213963
location: region:213511-213963:1
so has part: feature:213511-213963:1:exon
subclass of: SO_0000010

position:213511:1
position: 213511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213963:1
position: 213963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213511-213963:1:exon

HMPREF0389_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: dut
locus tag: HMPREF0389_RS00900
old locus tag: HMPREF0389_00451
EC number: 3.6.1.23
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010964734.1
GO function: GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO process: GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dUTP diphosphatase
translation: MVNLETKKVFFEKIHEDAILPSYAHEGDAGMDLYSVEEVTVSSGDSAMIHTGLKMKLPMHTEGQVRPRSGLALKHQITLLNSPGTIDEGYRGELCIILINHGKKDFVVEKGMKVAQMVIAPVMQVKIEEVSCIGEDTIRGANGFGSSGLR
SIO_010081: HMPREF0389_RS00900
subclass of: SO_0000673
so part of: HMPREF0389_RS00900
location: 213511..213963
location: region:213511-213963:1
so has part: feature:213511-213963:1:exon

WP_041250913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213511-213963:1:exon

HMPREF0389_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00905
old locus tag: HMPREF0389_00450
so part of: sequence
location: 213996..215609
location: region:213996-215609:1
so has part: feature:213996-215609:1:exon
subclass of: SO_0000010

position:213996:1
position: 213996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215609:1
position: 215609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213996-215609:1:exon

HMPREF0389_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00905
old locus tag: HMPREF0389_00450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012993328.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M20/M25/M40 family metallo-hydrolase
translation: MKERIKKIFEESISIVSFTNTKTERDIEEYIYQYMSEMKYFKQYPNNFGMKEIPNDVHGRRVNWGLVNSGRKETVILFHHHDTVDIEDYGSLQNIALENEPLKKELLKMDLPKEIQSDICSNEWIFGRGSCDMKASLALQLAVLEEYSKAKNPKVNALYLSVADEESYSQGMRCAITLLAELKEKFDLEYILAIDSEPFESNSNDVKGLHVGTVGKMMPTIVAQGVVSHIKEPLKGINAISLLSRIVSTIDLNPNLYECAKGENSPLPSWSYARDLKEIYDVSTALRAAGYFSVLHLERSPKEIMEIIYTLCEEAIDEFYDNYVKLQDRFCVEHMIAKPKILFFEDLMKLCQEKEGFESFWSQLEQDSAKKLSEGTSYQDITIDNIQQLLEFYGKKEAIIVLAIAAPYYPALSSRNVKNSKIEIEKLVQCYADYLKTNYNFSLNVEEYFMGICDISYCALEKSLKDYTSVMDSMAVSKSVYDIDFENLNKINIPGINLGPWGKDLHKFTERVYEKDVYDTIPNFLLYLLNNIEKIKK
SIO_010081: HMPREF0389_RS00905
subclass of: SO_0000673
so part of: HMPREF0389_RS00905
location: 213996..215609
location: region:213996-215609:1
so has part: feature:213996-215609:1:exon

WP_014261860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213996-215609:1:exon

HMPREF0389_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00910
old locus tag: HMPREF0389_00449
so part of: sequence
location: 215640..217007
location: region:215640-217007:1
so has part: feature:215640-217007:1:exon
subclass of: SO_0000010

position:215640:1
position: 215640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217007:1
position: 217007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215640-217007:1:exon

HMPREF0389_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00910
old locus tag: HMPREF0389_00449
EC number: 3.4.11.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007285889.1
GO function: GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminopeptidase
translation: MEHELKWNQLKKQELKKVEEYAKGYMNFLDSSKTERECAKEIIRLAELNGFKDIEYYQKKGKITAGSKVMINHKNKSVLLFVMGTESLEKGFHLVGSHIDSPRVDLKANPLYEDGNLALLKTHYYGGIKKYQWGCIPLAMYGVLFTKNGKIEISIGDKEEDPVFCINDLLIHLSAKQMEKKASVVLEGEQLNVVFGHIPVKSEEKDTIKKNVLNILLKEYGIEEQDFLSAEIEMVPAGKSRFVGLDKGLVGGYGQDDRVCAYASLKGILEITSPKYTACCLFADKEEIGSTGNTGMNSKLLENVISELVDLEGEYSGLKVRRALKNAKMLSADVNAAYDPTFSDVMDKQNCAFVGEGVCVTKYTGARGKGGCSDANAEFLHEVITQFNKAKVVWQTGELGKVDAGGGGTIACFLAEYGAEVLDCGTAVLNMHSPFELSSKFDIYMTFLAYRMFLS
SIO_010081: HMPREF0389_RS00910
subclass of: SO_0000673
so part of: HMPREF0389_RS00910
location: 215640..217007
location: region:215640-217007:1
so has part: feature:215640-217007:1:exon

WP_014261861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215640-217007:1:exon

HMPREF0389_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: pyrR
locus tag: HMPREF0389_RS00915
old locus tag: HMPREF0389_00448
so part of: sequence
location: 217183..217719
location: region:217183-217719:1
so has part: feature:217183-217719:1:exon
subclass of: SO_0000010

position:217183:1
position: 217183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217719:1
position: 217719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217183-217719:1:exon

HMPREF0389_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: pyrR
locus tag: HMPREF0389_RS00915
old locus tag: HMPREF0389_00448
EC number: 2.4.2.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013120695.1
GO process: GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR
translation: MREKAMIMDQKSMERGITRISHEILEKNKGATDIVIIGIHRRGIPLAKKIAQKIFEIENIQVSVGGIDITNYRDDIKEKNIKNIENDISKLDISEKKVVLVDDVLYTGRTVRAAMDALIDMGRPKAIQLAVLIDRGHRELPIRADYVGKNLPTSKDEIVKVYLEEMDEKTGVFILEEE
SIO_010081: HMPREF0389_RS00915
subclass of: SO_0000673
so part of: HMPREF0389_RS00915
location: 217183..217719
location: region:217183-217719:1
so has part: feature:217183-217719:1:exon

WP_156775275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217183-217719:1:exon

HMPREF0389_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00920
old locus tag: HMPREF0389_00447
so part of: sequence
location: 217733..218977
location: region:217733-218977:1
so has part: feature:217733-218977:1:exon
subclass of: SO_0000010

position:217733:1
position: 217733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218977:1
position: 218977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217733-218977:1:exon

HMPREF0389_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00920
old locus tag: HMPREF0389_00447
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009531223.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015205 - nucleobase transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-xanthine permease family protein
translation: MTDSKIVETVGTDIIQDTTPTQKIILALQHLIAMFGATVLVPILTGLDISVALFCAGMGTLIFHLCTKKKIPVFLGSSFAFIPVIVVVGEQYGDLRYAQGGIVVSGLCYVILSFVVKKIGAEKITKFFPPQVIGPMIIVIGFNLIPTAWNMASNHFLVAFVTLAVALGIAKFGRGFLRQLAIIIAVATGYLLSFKFHIIDTDIITSSSWVQIPNFTFPKFDLGAILIIVPVILAVFMEHVGDITTNGAVVGKNFIEDPGLNRTLLGDGMATICAGFLGGPANTTYGENTGVLAITKNYDPGILRIAAVFAILLGTIGKVGGVLRSIPVPVMGGISLMLFSMIAYIGFKNIKDKKVQMNPKNIFIMATIIIIGLGGHVGLKIAIPITQNVSLSGLSLAALVGIILNSILYRKELV
SIO_010081: HMPREF0389_RS00920
subclass of: SO_0000673
so part of: HMPREF0389_RS00920
location: 217733..218977
location: region:217733-218977:1
so has part: feature:217733-218977:1:exon

WP_014261863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217733-218977:1:exon

HMPREF0389_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: tnpA
locus tag: HMPREF0389_RS00925
old locus tag: HMPREF0389_01667
so part of: sequence
location: complement(219115..219585)
location: region:219115-219585:-1
so has part: feature:219115-219585:-1:exon
subclass of: SO_0000010

position:219115:-1
position: 219115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219585:-1
position: 219585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219115-219585:-1:exon

HMPREF0389_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: tnpA
locus tag: HMPREF0389_RS00925
old locus tag: HMPREF0389_01667
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004844952.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MSQQNNVNNSLAHTKWNCKYHVVFAPKYRRKVFYGEKKEAIRDIIRTLCQWKGVEIIEGEVCPDHIHLLLSIPPKISVSSFMGYLKGKSSLMIFQKYGNMKFAYRNREFWCKGYYVDTVGKNTKAIQEYISNQLKVDRESDQLSIFDPRDPFTGSK
SIO_010081: HMPREF0389_RS00925
subclass of: SO_0000673
so part of: HMPREF0389_RS00925
location: complement(219115..219585)
location: region:219115-219585:-1
so has part: feature:219115-219585:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219115-219585:-1:exon

HMPREF0389_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00930
old locus tag: HMPREF0389_01670
so part of: sequence
location: complement(219763..220845)
location: region:219763-220845:-1
so has part: feature:219763-220845:-1:exon
subclass of: SO_0000010

position:219763:-1
position: 219763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220845:-1
position: 220845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219763-220845:-1:exon

HMPREF0389_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00930
old locus tag: HMPREF0389_01670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262305.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MEYNNTTANSRKNKHLNDFERGQIQLLHNKGYSAYKIAKELRRASNTIRNELKRGTVTQIKGIHDVQVYYPDTGKLVYEKNRKNCKKKFKALKCSKYLDFVKQKFNEEKWSLDAICGYAKLNKLYEGQRVCTKTLYNYVDIGLIGIKSIDLPLRVKRKPAKKRVKENKRKLGKSIEERPQEIETRKTFGNWEIDTVIPKKNKEEASLITITERKSRMELILKLNRRKASIVNETLKNTLNRLKEPQKIFRSITSDNGLEFAKLCELEKTYIGNIYYCHPNNPQERGTNEKHNSLIRRFLPKGKSLNDYEEEHYIKIMNWMNNLPRKILNYRTPIEVFIEELNNLGLLDDNEELVQFDIAI
SIO_010081: HMPREF0389_RS00930
subclass of: SO_0000673
so part of: HMPREF0389_RS00930
location: complement(219763..220845)
location: region:219763-220845:-1
so has part: feature:219763-220845:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219763-220845:-1:exon

HMPREF0389_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00935
old locus tag: HMPREF0389_00445
so part of: sequence
location: 221090..222298
location: region:221090-222298:1
so has part: feature:221090-222298:1:exon
subclass of: SO_0000010

position:221090:1
position: 221090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222298:1
position: 222298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221090-222298:1:exon

HMPREF0389_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00935
old locus tag: HMPREF0389_00445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009527960.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dicarboxylate/amino acid:cation symporter
translation: MWSSLFLKKNLYFRIAIGFFVGIFTGIFFPVLSKNLKFLGDIYLNLIKMMIVPIIFFSVTTGILNLGDRREFKRIGFKTIFLFVFMFLASSAVSLLVAYAIQPGHNLILENTPTYTGELTTPSAVDFFSNIVPSNIIDAMAKGNILSVILFSALFAIASVSIEKESQKVRELLQSFSSVFFKILDYVMETSPLGVAALMAYSIAEYGEGIFTALSKYILTAYLACIAVFIVVMLVPTLVYTKISFKRFIVGLSKIWLVTLSTTSSAAALPTSLKISKEEYLVPEEISNFVLPLGCTINMCGGAASFCCLAVFVSGFYNITFSFEQIVYFVIIATLINMGAPGIPGGGIILGASFLSIIGLPFDLMGPIAAFYRLLDMAFTTMNVTGDIAANLLIAKSEEKHR
SIO_010081: HMPREF0389_RS00935
subclass of: SO_0000673
so part of: HMPREF0389_RS00935
location: 221090..222298
location: region:221090-222298:1
so has part: feature:221090-222298:1:exon

WP_014261864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221090-222298:1:exon

HMPREF0389_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rsmB
locus tag: HMPREF0389_RS00940
old locus tag: HMPREF0389_00444
so part of: sequence
location: 222530..223891
location: region:222530-223891:1
so has part: feature:222530-223891:1:exon
subclass of: SO_0000010

position:222530:1
position: 222530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223891:1
position: 223891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222530-223891:1:exon

HMPREF0389_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rsmB
locus tag: HMPREF0389_RS00940
old locus tag: HMPREF0389_00444
EC number: 2.1.1.176
inference: COORDINATES: protein motif:HMM:NF011494.0
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
translation: MKKQSLKKEKNNAVPSVRKLAYDSVYAVKYKGVYSNLYISQSIKKYRLIDRDRVFYTELVYGTLENIKFLDYVIDKFSNVKVDKLSKEVLTILEVSLYQIHYMDGVQNFAVVNEMVNLAKVVWHNARIPSFVNGILRNILRNPNAFDILLPPGKKRLSIEYSVSEWISELLINQYSLEKAEDILYALSQHPAIYLRVNMNKVTTDRLKEKLCSLGVDTEKVVGFDNILQTKHFNGIEKNEYFLKGYFTIQDISSVCCIKALSPKTGEKILDICAAPGGKTTAIAEIIGEKGIVFSNDKGVNKLNLISQSAKRLCLDNIELSDIDACEFQENWKEMFDRVLVDVPCSGLGVIRRKPEIRYKQGVEFKSLYPIQKKILDNASQYVKKDGILIYSTCTLNREENQEVIHHFLSTHTNFTLDDMIIPTLGQVYGMVELLPDEGQWDGFFISKLKRIQ
SIO_010081: HMPREF0389_RS00940
subclass of: SO_0000673
so part of: HMPREF0389_RS00940
location: 222530..223891
location: region:222530-223891:1
so has part: feature:222530-223891:1:exon

WP_049770189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222530-223891:1:exon

HMPREF0389_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rlmN
locus tag: HMPREF0389_RS00945
old locus tag: HMPREF0389_00443
so part of: sequence
location: 223904..224941
location: region:223904-224941:1
so has part: feature:223904-224941:1:exon
subclass of: SO_0000010

position:223904:1
position: 223904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224941:1
position: 224941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223904-224941:1:exon

HMPREF0389_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rlmN
locus tag: HMPREF0389_RS00945
old locus tag: HMPREF0389_00443
EC number: 2.1.1.192
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014255702.1
GO function: GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0031167 - rRNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
translation: MCVDLRSMEYYEVEEVVLNLGEKKYRAKQIYNFLAKGVSSIDEMYTLSKDFREKLKERYYICKTDIYHKLESNLDGTRKYLIELGDGNLIETVLMIYKNGPSICLSTQVGCRMGCKFCASTVDGLVRNLTPGEIIGQMITVQKDLGERIANIVIMGSGEPFDNFDNLVKFLKLVHEDYGLQIGYRHITISTCGLVPKIREMEKLGIPINLAISLHQVEQNKREEIMPIAKVYDIEELIEAGKHYANVTKRRVTYEYALIEGVTDSLEEAHKLGSLLKGSLSLINLIPINPIKEKSFKKPNLKRVQAFQKVLLNYHIITTVRRELGSDINGACGQLRRDVINRDKR
SIO_010081: HMPREF0389_RS00945
subclass of: SO_0000673
so part of: HMPREF0389_RS00945
location: 223904..224941
location: region:223904-224941:1
so has part: feature:223904-224941:1:exon

WP_014261866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223904-224941:1:exon

HMPREF0389_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00950
old locus tag: HMPREF0389_00442
so part of: sequence
location: 224947..225693
location: region:224947-225693:1
so has part: feature:224947-225693:1:exon
subclass of: SO_0000010

position:224947:1
position: 224947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225693:1
position: 225693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224947-225693:1:exon

HMPREF0389_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00950
old locus tag: HMPREF0389_00442
inference: COORDINATES: protein motif:HMM:NF033484.1
GO function: GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
GO process: GO:0006470 - protein dephosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Stp1/IreP family PP2C-type Ser/Thr phosphatase
translation: MKYSLLSDKGNVREMNEDYTKSLKVSENAHLFLLADGMGGHNKGEVASELAVESVVEYFQRHREIISNLHQKTDLPKIQEFIKRAIIFSNERVNKESLKEDQHGMGTTLVLSYLTKEFVVIANIGDSRAYLYCDNSFEQVTNDNSYVQELVKLGVISNEEARNHEKKNIVTRAIGTESGVEIDFYNFEIKEKDVLLMCSDGLTNMLKDFEIKEILDRKYLPSFCCEQLVKEAKQKGGYDNISIILVYL
SIO_010081: HMPREF0389_RS00950
subclass of: SO_0000673
so part of: HMPREF0389_RS00950
location: 224947..225693
location: region:224947-225693:1
so has part: feature:224947-225693:1:exon

WP_014261867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224947-225693:1:exon

HMPREF0389_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: pknB
locus tag: HMPREF0389_RS00955
old locus tag: HMPREF0389_00441
so part of: sequence
location: 225715..227613
location: region:225715-227613:1
so has part: feature:225715-227613:1:exon
subclass of: SO_0000010

position:225715:1
position: 225715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227613:1
position: 227613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225715-227613:1:exon

HMPREF0389_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: pknB
locus tag: HMPREF0389_RS00955
old locus tag: HMPREF0389_00441
inference: COORDINATES: protein motif:HMM:NF033483.0
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]
GO process: GO:0006468 - protein phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Stk1 family PASTA domain-containing Ser/Thr kinase
translation: MEKLIGKILGNRYEILEKIGEGGMSVVYKAKCHILNRIVAVKVLKQEYSNDDEFLVKFKNEALSVAKLNNGNIINVFDVGQDGNISYIVMEYVDGKNLKQLLKTQKKFPVEQVLDISKQIAMALEEAHNKKIVHRDIKAQNIMLTTKGVVKVGDFGIAKAVSSSTITASGAIMGSVHYFSPEQARGGFVDERSDLYSLGIIMYEMVTGRLPFDGDSPVNIALKHIQNNITFLESDDVPLELQDMILKLTQKNPDKRYSGATSLIQDISYLQDGKKVHRYSYDEESDYCTKKVPTLKRDDFYQNAISKNQDDIEFDFEKKGRKKPSIVTLLAIITAIGLLGIVFSMRGFLFQSSKNTIPVPHIIGLSEQEARETLERAGLQLNVIKTEPNTKYESGQVTDTNPNEGIKVPKGTIVNVVLADSSKEKLTLENFVGQDFTEVEKKYVGKLQFKTEFIPSTEPTNRILEQQPSEGTEVELGSQIILFLSKNANDIPISVPNVVGKDASEAKGILSLFKVSESYKEDKEQPEGVVLSQKPEEGEQAKPKSTVHIVVNKYDRPKTITKRIVVTLPRDNEVVSVKITDQNSSKIIFNKNVTVSEVDGVLSVDVEGLQGETKKFEIEIDSNFYDTTEISF
SIO_010081: HMPREF0389_RS00955
subclass of: SO_0000673
so part of: HMPREF0389_RS00955
location: 225715..227613
location: region:225715-227613:1
so has part: feature:225715-227613:1:exon

WP_014261868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225715-227613:1:exon

HMPREF0389_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rsgA
locus tag: HMPREF0389_RS00960
old locus tag: HMPREF0389_00440
so part of: sequence
location: 227640..228530
location: region:227640-228530:1
so has part: feature:227640-228530:1:exon
subclass of: SO_0000010

position:227640:1
position: 227640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228530:1
position: 228530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227640-228530:1:exon

HMPREF0389_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rsgA
locus tag: HMPREF0389_RS00960
old locus tag: HMPREF0389_00440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018589795.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome small subunit-dependent GTPase A
translation: MLEGIITKAISSFYSVDTEEGVFICKARGLFKNKKQSLLVGDKVNIVITDNVSKDGIIEKIIPRTNILIRPSIANVSHALLFFSIKNPDPNLSLIDRFIVLAQEQQLKITLCFSKVDLDDGIRLQKLLEIYKKVGYPVISISTYDNKNLEELKNTLKSHITVIAGPSGAGKSSFINTLSQNFNIKTNSVSSKIGRGRHTTRHVELMRIGTDSWIADTPGFSSLSLSHIPYTELKEYFLEFHDYDLNCKFSNTCLHYKEPDCCVINAVKNKEISLERYQSYLQLLEEIKETERRKSW
SIO_010081: HMPREF0389_RS00960
subclass of: SO_0000673
so part of: HMPREF0389_RS00960
location: 227640..228530
location: region:227640-228530:1
so has part: feature:227640-228530:1:exon

WP_014261869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227640-228530:1:exon

HMPREF0389_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rpe
locus tag: HMPREF0389_RS00965
old locus tag: HMPREF0389_00439
so part of: sequence
location: 228580..229239
location: region:228580-229239:1
so has part: feature:228580-229239:1:exon
subclass of: SO_0000010

position:228580:1
position: 228580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229239:1
position: 229239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228580-229239:1:exon

HMPREF0389_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rpe
locus tag: HMPREF0389_RS00965
old locus tag: HMPREF0389_00439
EC number: 5.1.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007286532.1
GO function: GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO process: GO:0006098 - pentose-phosphate shunt [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribulose-phosphate 3-epimerase
translation: MIKLAPSILSADFSQLAESVKAVENAGCEYLHIDVMDGHFVPNITFGAVVFEKLRKKSNMTFDCHLMIEQPDLYLEDFVKAGADIITVHQEACVHLNRTIHHIKELGCKAGVAINPATSPQALEYVLQDVDMVLIMSVNPGFGGQKFIPQSLDKIKKLKQMIDAKNYNVDIQVDGGVSVDNIHDIVTAGANIVVAGSAIFGKDNIQKAVSNLRDSAEQS
SIO_010081: HMPREF0389_RS00965
subclass of: SO_0000673
so part of: HMPREF0389_RS00965
location: 228580..229239
location: region:228580-229239:1
so has part: feature:228580-229239:1:exon

WP_014261870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228580-229239:1:exon

HMPREF0389_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00970
old locus tag: HMPREF0389_00438
so part of: sequence
location: 229263..229925
location: region:229263-229925:1
so has part: feature:229263-229925:1:exon
subclass of: SO_0000010

position:229263:1
position: 229263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229925:1
position: 229925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229263-229925:1:exon

HMPREF0389_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00970
old locus tag: HMPREF0389_00438
EC number: 2.7.6.2
inference: COORDINATES: protein motif:HMM:TIGR01378.1
GO function: GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO process: GO:0006772 - thiamine metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine diphosphokinase
translation: MSLLGKKAAILWNGDLQDKEFIVSRLNHFDMIICADGAADFLKEYDYLPDVIIGDLDSICEDTLEYYRERQVEFLRFPPEKDFTDSELTIRYLLEQGIYHATVFGFSGSRLDHSIANLGLLYYAVNQGISINYISRRNRIMCLKPGTYFFENQYKFYFSLVALFGIVKNISLSGAKYSLSSYTMKQGETIGISNEYIENICLEFEDGHLLVIESEKDISI
SIO_010081: HMPREF0389_RS00970
subclass of: SO_0000673
so part of: HMPREF0389_RS00970
location: 229263..229925
location: region:229263-229925:1
so has part: feature:229263-229925:1:exon

WP_014261871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229263-229925:1:exon

HMPREF0389_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00975
old locus tag: HMPREF0389_01679
so part of: sequence
location: 230103..230990
location: region:230103-230990:1
so has part: feature:230103-230990:1:exon
subclass of: SO_0000010

position:230103:1
position: 230103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230990:1
position: 230990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230103-230990:1:exon

HMPREF0389_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00975
old locus tag: HMPREF0389_01679
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013362346.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1385 domain-containing protein
translation: MKEPVGGQALIEGVMMRCGKKKAIAIRKSNGEILTTKLKPHILFENSVIYQIPFIRGIFVLINSMIEGSKDLTYSASFFMEDEENSKLEQLLENVFGKYAQKIVDGAIFAFSFFLAVFLFVVLPTMIAKNQSQNTWFISLKEGVIKILLFISYLFLVSRTKDMHRVFQYHGAEHKSVFCYEQGRPLTVENVRKMSRFHPRCGTNFIFLILIVSVLLFSFINVRVVLVRSIIKLSLFPVVSGISYELLRIAGKKDIFAIKLFVYPGMLLQRITTQEPDDSQIEVAISALLAAVEES
SIO_010081: HMPREF0389_RS00975
subclass of: SO_0000673
so part of: HMPREF0389_RS00975
location: 230103..230990
location: region:230103-230990:1
so has part: feature:230103-230990:1:exon

WP_014261872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230103-230990:1:exon

HMPREF0389_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: prmC
locus tag: HMPREF0389_RS00980
old locus tag: HMPREF0389_01680
so part of: sequence
location: 231030..231869
location: region:231030-231869:1
so has part: feature:231030-231869:1:exon
subclass of: SO_0000010

position:231030:1
position: 231030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231869:1
position: 231869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231030-231869:1:exon

HMPREF0389_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: prmC
locus tag: HMPREF0389_RS00980
old locus tag: HMPREF0389_01680
EC number: 2.1.1.297
inference: COORDINATES: protein motif:HMM:TIGR00536.1
GO function: GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor N(5)-glutamine methyltransferase
translation: MNIQELLKEGQQLLQSSSSSALLDAQLLLMYVLQVDKLYLMIHLNEEVPLEKIGIYYELLAERKQSVPIAYLIHKKPFYGRDFFVSPGVLIPRPDTEILIEKTLDVIPDNKQVSGIEIGCGSGAISITLLLENRLLNMVATDIEAIPIEITSKNANLNNVQNRLRLIKTDLFNGIPSKQFDFIISNPPYIPYDDSTKLMKDVIDYEPKVALFAEENGIFFFRKILEDGKKFLKEDGFVAFEIGCSQAKQIRELCLKEGFHKVLIHRDLHGLDRVVIAFR
SIO_010081: HMPREF0389_RS00980
subclass of: SO_0000673
so part of: HMPREF0389_RS00980
location: 231030..231869
location: region:231030-231869:1
so has part: feature:231030-231869:1:exon

WP_014261873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231030-231869:1:exon

HMPREF0389_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: prfA
locus tag: HMPREF0389_RS00985
old locus tag: HMPREF0389_00436
so part of: sequence
location: 231899..232963
location: region:231899-232963:1
so has part: feature:231899-232963:1:exon
subclass of: SO_0000010

position:231899:1
position: 231899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232963:1
position: 232963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231899-232963:1:exon

HMPREF0389_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: prfA
locus tag: HMPREF0389_RS00985
old locus tag: HMPREF0389_00436
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003421389.1
GO function: GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 1
translation: MFDNLKALEEKYEELNKIVADPSTMNDMDKWKAYMKEISDTEPIIQKYREFKQTRDDIEGSKQILEEEKDEELRELAKMELSEKEELMEKVQNELKLLLIPKDPNDEKNVIVEIRGGAGGDEAALFAGVLFRMYSMYASARNWKVEMMSANETGIGGYKEVVFMITGKGAYSRLKYESGVHRVQRVPETESSGRIHTSTSTVAVLPEVDDVEVELDMNDVRVDVFRSSGNGGQSVNTTDSAVRLTHKPTGIVISMQDEKSQLKNKEKAFKILKAKLYDLELEKAQKELAQERKSQVGSGDRSERIRTYNYPQGRVTDHRIGLTLYKLENFLNGDIDEILDALITTDQAEKLQSI
SIO_010081: HMPREF0389_RS00985
subclass of: SO_0000673
so part of: HMPREF0389_RS00985
location: 231899..232963
location: region:231899-232963:1
so has part: feature:231899-232963:1:exon

WP_014261874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231899-232963:1:exon

HMPREF0389_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS00990
old locus tag: HMPREF0389_00435
so part of: sequence
location: 233000..234019
location: region:233000-234019:1
so has part: feature:233000-234019:1:exon
subclass of: SO_0000010

position:233000:1
position: 233000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234019:1
position: 234019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233000-234019:1:exon

HMPREF0389_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS00990
old locus tag: HMPREF0389_00435
EC number: 2.7.7.87
inference: COORDINATES: protein motif:HMM:TIGR00057.1
GO function: GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-threonylcarbamoyladenylate synthase
translation: MKAKLYTIKDVHADDDKIKKASNIIQNGGLVIFPTETVYGLGADAFNPVASEKIYSAKGRPSDNPLILHISDLDMLNKIVKNVPEKANKLINQFWPGPLTIIFEKKDIVSDKITGGLNTVAVRMPSNPIALSFIRNANTPIAAPSANISGKPSITRWEDAVEEMGNRVDAILLSEPSEIGLESTIIDLTQDVPMILRVGKISKTEIEKAIGFTEIDKTIFGEKDIPKAPGMKYKHYSPNAEVFIASKENFVEKVKQKYKASPSCNTVIFTMNQNKSYFKDEKVYLLGETTLQAAKFFFHFLRKADKEGYDTIIMEDISFDEIGEAVMNRARKSAGNKYL
SIO_010081: HMPREF0389_RS00990
subclass of: SO_0000673
so part of: HMPREF0389_RS00990
location: 233000..234019
location: region:233000-234019:1
so has part: feature:233000-234019:1:exon

WP_014261875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233000-234019:1:exon

HMPREF0389_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rpiB
locus tag: HMPREF0389_RS00995
old locus tag: HMPREF0389_00434
so part of: sequence
location: 234221..234664
location: region:234221-234664:1
so has part: feature:234221-234664:1:exon
subclass of: SO_0000010

position:234221:1
position: 234221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234664:1
position: 234664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234221-234664:1:exon

HMPREF0389_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rpiB
locus tag: HMPREF0389_RS00995
old locus tag: HMPREF0389_00434
EC number: 5.3.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009530913.1
GO function: GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO process: GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose 5-phosphate isomerase B
translation: MRIALGSDHGGYRLKEAIKEHLTKKGHFVTDYGTDSIESVDYPDYAEKLCHGILNGEADRGILICGTGIGIAIAANKVKGIRCATVSDVFSAKKCVEHNNCQVMSLGERTIGFGLALELAEAFLTATFEGDRHQRRVDKIMEIENQK
SIO_010081: HMPREF0389_RS00995
subclass of: SO_0000673
so part of: HMPREF0389_RS00995
location: 234221..234664
location: region:234221-234664:1
so has part: feature:234221-234664:1:exon

WP_014261876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234221-234664:1:exon

HMPREF0389_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: upp
locus tag: HMPREF0389_RS01000
old locus tag: HMPREF0389_00433
so part of: sequence
location: 234687..235322
location: region:234687-235322:1
so has part: feature:234687-235322:1:exon
subclass of: SO_0000010

position:234687:1
position: 234687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235322:1
position: 235322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234687-235322:1:exon

HMPREF0389_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: upp
locus tag: HMPREF0389_RS01000
old locus tag: HMPREF0389_00433
EC number: 2.4.2.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011971477.1
GO function: GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil phosphoribosyltransferase
translation: MSKGNVIVVNHPMVQHKLTILRDKKTGSKEFRELVKEIGMFMVYETTRDLPMQEIEIDTPICKTKSKVLAGKKLGVVPILRAGLGMMEGVLQLIPAAKVGHVGLYRDPKTLKPVEYYCKLPQDVEERELLLVDPMLATGGSASAAIELLKQKGAKSIKLVCIVGCPEGIEEVHKYHPEIDIYLASIDEKLNDHGYIVPGLGDAGDRIFGTK
SIO_010081: HMPREF0389_RS01000
subclass of: SO_0000673
so part of: HMPREF0389_RS01000
location: 234687..235322
location: region:234687-235322:1
so has part: feature:234687-235322:1:exon

WP_014261877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234687-235322:1:exon

HMPREF0389_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rplU
locus tag: HMPREF0389_RS01005
old locus tag: HMPREF0389_00432
so part of: sequence
location: 235472..235777
location: region:235472-235777:1
so has part: feature:235472-235777:1:exon
subclass of: SO_0000010

position:235472:1
position: 235472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235777:1
position: 235777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235472-235777:1:exon

HMPREF0389_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rplU
locus tag: HMPREF0389_RS01005
old locus tag: HMPREF0389_00432
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005365918.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L21
translation: MYAVVETGGKQYRVQEGDVIQVEKLAVNEGEVVSLDVIALGKDGKVFVGEELANVKVNAKVVSHGKGKKVIVFKYKPKKDYRRKQGHRQPYTELVIETVEG
SIO_010081: HMPREF0389_RS01005
subclass of: SO_0000673
so part of: HMPREF0389_RS01005
location: 235472..235777
location: region:235472-235777:1
so has part: feature:235472-235777:1:exon

WP_014261878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235472-235777:1:exon

HMPREF0389_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01010
old locus tag: HMPREF0389_00431
so part of: sequence
location: 235783..236115
location: region:235783-236115:1
so has part: feature:235783-236115:1:exon
subclass of: SO_0000010

position:235783:1
position: 235783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236115:1
position: 236115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235783-236115:1:exon

HMPREF0389_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01010
old locus tag: HMPREF0389_00431
inference: COORDINATES: protein motif:HMM:NF016233.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosomal-processing cysteine protease Prp
translation: MTKISIIDNHVSKKLQISLEGHSGYADAGEDIVCSAISVLSQAIFNGITEVLKYDISYKVQDGYFYFEIPDSMLKQDSRVKALLDTFVLNLKDLEIQYKDYIKLCIEEVH
SIO_010081: HMPREF0389_RS01010
subclass of: SO_0000673
so part of: HMPREF0389_RS01010
location: 235783..236115
location: region:235783-236115:1
so has part: feature:235783-236115:1:exon

WP_014261879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235783-236115:1:exon

HMPREF0389_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rpmA
locus tag: HMPREF0389_RS01015
old locus tag: HMPREF0389_00430
so part of: sequence
location: 236115..236393
location: region:236115-236393:1
so has part: feature:236115-236393:1:exon
subclass of: SO_0000010

position:236393:1
position: 236393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236115-236393:1:exon

HMPREF0389_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rpmA
locus tag: HMPREF0389_RS01015
old locus tag: HMPREF0389_00430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013361585.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L27
translation: MLRINLQLFASKKGVGSSKNGRDSAAKRLGVKAGDGQLVTAGSILVRQRGTKIHPGTNVGIGGDDTLFAMVEGHVKFERKDKKRKQVSIIPA
SIO_010081: HMPREF0389_RS01015
subclass of: SO_0000673
so part of: HMPREF0389_RS01015
location: 236115..236393
location: region:236115-236393:1
so has part: feature:236115-236393:1:exon

WP_014261880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236115-236393:1:exon

HMPREF0389_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: glyA
locus tag: HMPREF0389_RS01020
old locus tag: HMPREF0389_00429
so part of: sequence
location: 236884..238173
location: region:236884-238173:1
so has part: feature:236884-238173:1:exon
subclass of: SO_0000010

position:236884:1
position: 236884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238173:1
position: 238173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236884-238173:1:exon

HMPREF0389_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: glyA
locus tag: HMPREF0389_RS01020
old locus tag: HMPREF0389_00429
EC number: 2.1.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003422953.1
GO function: GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0070905 - serine binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine hydroxymethyltransferase
translation: MYNYYHLMKTDSDVYNILEGELQRQKQNLELIASENIVSKAVMEAMGSCFTNKYAEGYPFKRYYGGCEFIDKLEVLAIERAKKIFGAEHANVQPHSGSQANMGVYFAMLEYGDKVLGMDLSQGGHLTHGSPVNISGKYFQFFDYGVEKDTEKINYDVVLQRAKEVQPKLIVAGASAYSRELDFKKFREIADEVGAYLMVDMAHIAGLVAAGLHSNPCEYADFVTTTTHKTLRGPRGGLILCKEEYAAKIDKAIFPGIQGGPLEHIVAAKAVCFKEAMEPEFKNYQKQIILNAKALAGALEQKGYHLVSGGTDNHLILVSLIEKNMTGKEAETKLDEARITVNKNSIPFDPQNFFKTSGIRIGTAAVTTRGMKELEMEQIADAIDLVLTKDDIVSAKQIVEELTKKYPIYEEHDEKILHWGQNIWDKTRK
SIO_010081: HMPREF0389_RS01020
subclass of: SO_0000673
so part of: HMPREF0389_RS01020
location: 236884..238173
location: region:236884-238173:1
so has part: feature:236884-238173:1:exon

WP_049770190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236884-238173:1:exon

HMPREF0389_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01025
old locus tag: HMPREF0389_00428
so part of: sequence
location: 238198..239076
location: region:238198-239076:1
so has part: feature:238198-239076:1:exon
subclass of: SO_0000010

position:238198:1
position: 238198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239076:1
position: 239076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238198-239076:1:exon

HMPREF0389_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01025
old locus tag: HMPREF0389_00428
EC number: 2.7.1.35
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010964930.1
GO function: GO:0008478 - pyridoxal kinase activity [Evidence IEA]
GO process: GO:0009443 - pyridoxal 5'-phosphate salvage [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxamine kinase
translation: MNKLIKTVAAIHDLSGSGRGSLTTVIPILSSMGVRVCPMPTAILSATTEFEHYSFLDLTDYLPEYISNWEKNHITFDCIYSGFLGSSKQIEIVSNFIDTFKKEDTLVVIDPVLGDNGTLYETMDEQMVCLMKTLIKQAHIITPNFTEARYLLGESCNRNSSNKISFFEIKERLTELSDMGPEIVVITGVPDEDDRKTNTVAYDKKTNRFWKVSCQYIPASFPGTGDAYTSVMIGSLLQGDSLPIALERGVQFITQCIRTSYGFHYPHIEGVLLEKVLHLLNLPIISENYEEM
SIO_010081: HMPREF0389_RS01025
subclass of: SO_0000673
so part of: HMPREF0389_RS01025
location: 238198..239076
location: region:238198-239076:1
so has part: feature:238198-239076:1:exon

WP_083799702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238198-239076:1:exon

HMPREF0389_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01030
old locus tag: HMPREF0389_00427
so part of: sequence
location: 239635..240063
location: region:239635-240063:1
so has part: feature:239635-240063:1:exon
subclass of: SO_0000010

position:239635:1
position: 239635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240063:1
position: 240063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239635-240063:1:exon

HMPREF0389_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01030
old locus tag: HMPREF0389_00427
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLISGFPGVGKTRASQIFKTMIDLDSMQYTNREKYPYCYIYDAIQLSKEGYIVLMSQELEIVELISLSGEEYMIVCPDISLKNEYMIRYLKRGNVNNWIDAVMKNWETYLNKLKEYPKENVVILQSGQYLSDVMMSIRWNRK
SIO_010081: HMPREF0389_RS01030
subclass of: SO_0000673
so part of: HMPREF0389_RS01030
location: 239635..240063
location: region:239635-240063:1
so has part: feature:239635-240063:1:exon

WP_014261883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239635-240063:1:exon

HMPREF0389_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01035
old locus tag: HMPREF0389_00426
so part of: sequence
location: 240449..242119
location: region:240449-242119:1
so has part: feature:240449-242119:1:exon
subclass of: SO_0000010

position:240449:1
position: 240449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242119:1
position: 242119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240449-242119:1:exon

HMPREF0389_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01035
old locus tag: HMPREF0389_00426
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009524481.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GspE/PulE family protein
translation: MKVGNILVKKGILKQEDIDYAKEVAVDRGISFKNALLQENMIDESQYLSAQAEEYGVEFVDLSTYAINNAACRYLSEKMVRKHHLIPIDINLSNKSLIVAMENPFDILAIDDAKISSGMNIEVMLASKKEIMNAIKNNYTSSEDVEKAIAEYNESDVSVDVFQEFESADVSNAPVVRLVKSIISDAVKSGTSDIHIEPFEDRVRVRNRIDGDLKEVLTLEKSVSSAMITRIKIIGRMDISEKRIPQDGRVETVVDDRPVDMRISILPTVYGEKAVIRLLDRGGLVVGKEQLGFTPKNLELFEKIIKAPEGMILLTGPTGSGKTTTLYAVLKELNNIKKNIITLEDPVEYRLDGVNQVQMNAKAGMTFASGLRSVLRQDPDVVMLGEIRDEETAQIAVRAAITGHVVLSTLHTNDTVSTISRLVDMGIESYMVTSAVVGVVAQRLIKKICPKCKEYYIPSMEEMILLGMEKPDYLCRGKGCNFCGGTGYSGRTAIHEILVIDKEVRTMVNRGEEADKIKNAARAKGMMTLSESAKQLVISGATTVEQMIRVAYSVDE
SIO_010081: HMPREF0389_RS01035
subclass of: SO_0000673
so part of: HMPREF0389_RS01035
location: 240449..242119
location: region:240449-242119:1
so has part: feature:240449-242119:1:exon

WP_014261884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240449-242119:1:exon

HMPREF0389_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01040
old locus tag: HMPREF0389_00425
so part of: sequence
location: 242398..243456
location: region:242398-243456:1
so has part: feature:242398-243456:1:exon
subclass of: SO_0000010

position:242398:1
position: 242398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243456:1
position: 243456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242398-243456:1:exon

HMPREF0389_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01040
old locus tag: HMPREF0389_00425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003366206.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV pilus twitching motility protein PilT
translation: MMTLEPIIRESIRTGASDIHLSVGIPPVLRIHGKLEKVGNYSLTAEDTESLANELLNEEEMEFFEEEGEIDVAYTFLEVCRYRVNVYREQGNFCIALRTITSAIPKMEDLKLPPVFKEFCKKKRGLILVTGPTGSGKSTTLASMVGYINQIRKEHIILIEDPIEYVHTHGNSVINQRELGRDTKSFANALRASLREDPDVILVGEMRDLETISTAITAAETGHLVMSTLHTIGAAKTIDRIIDIFPPHQQLQVRSQLSSVLEAVISQQLLPIANNRGRVVGLEIMSSTPALRNLIREGKTHQIQNVIQTNYGIGMRTMDGSLVDLFRKGIITKETLFEYAVDKESVKGLLSK
SIO_010081: HMPREF0389_RS01040
subclass of: SO_0000673
so part of: HMPREF0389_RS01040
location: 242398..243456
location: region:242398-243456:1
so has part: feature:242398-243456:1:exon

WP_014261885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242398-243456:1:exon

HMPREF0389_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01045
old locus tag: HMPREF0389_00424
so part of: sequence
location: 243483..243695
location: region:243483-243695:1
so has part: feature:243483-243695:1:exon
subclass of: SO_0000010

position:243483:1
position: 243483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243695:1
position: 243695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243483-243695:1:exon

HMPREF0389_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01045
old locus tag: HMPREF0389_00424
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKTFNYRAVDSAGIVVEDVANAENEDAVLLMLRGKGYTPISIDEKLQSKEISFGNSGKLNFLNCNIKLN
SIO_010081: HMPREF0389_RS01045
subclass of: SO_0000673
so part of: HMPREF0389_RS01045
location: 243483..243695
location: region:243483-243695:1
so has part: feature:243483-243695:1:exon

WP_014261886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243483-243695:1:exon

HMPREF0389_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01050
old locus tag: HMPREF0389_01681
so part of: sequence
location: complement(243669..244751)
location: region:243669-244751:-1
so has part: feature:243669-244751:-1:exon
subclass of: SO_0000010

position:243669:-1
position: 243669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244751:-1
position: 244751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243669-244751:-1:exon

HMPREF0389_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01050
old locus tag: HMPREF0389_01681
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262305.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MEYNNTTANSRKNKHLNDFERGQIQLLHNKGYSAYKIAKELRRASNTIRNELKRGTVTQIKGIHDVQVYYPDTGKLVYEKNRKNCKKKFKALKCSKYLDFVKQKFNEEKWSLDAICGYAKLNKLYEGQRVCTKTLYNYVDIGLIGIKSIDLPLRVKRKPAKKRVKENKRKLGKSIEERPQEIETRKTFGNWEIDTVIPKKNKEEASLITITERKSRMELILKLNRRKASIVNETLKNTLNRLKEPQKIFRSITSDNGLEFAKLCELEKTYIGNIYYCHPNNPQERGTNEKHNSLIRRFLPKGKSLNDYEEEHYIKIMNWMNNLPRKILNYRTPIEVFIEELNNLGLLDDNEELVQFDIAI
SIO_010081: HMPREF0389_RS01050
subclass of: SO_0000673
so part of: HMPREF0389_RS01050
location: complement(243669..244751)
location: region:243669-244751:-1
so has part: feature:243669-244751:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:243669-244751:-1:exon

HMPREF0389_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01055
old locus tag: HMPREF0389_00421
so part of: sequence
location: 244802..245887
location: region:244802-245887:1
so has part: feature:244802-245887:1:exon
subclass of: SO_0000010

position:244802:1
position: 244802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245887:1
position: 245887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244802-245887:1:exon

HMPREF0389_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01055
old locus tag: HMPREF0389_00421
inference: COORDINATES: protein motif:HMM:NF012694.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system F family protein
translation: MIFYGIFLVHFHFTINRKLNLKDVISFCRQESIMLKSGMDLNRSLDVLAKQSKSKKLKKNLFHLSDSVKKGTELSKSMENQGNAFPYLLKRTVQAGEMSGQMAEIIEKMAVHYEKDMKLRRKIRGAMMYPIILAFIVVAAVAILLTQVMPNFVKMFEGADMELPALTRFVMNLSDLLVHNWIWILLVLFAIVFLIRVALKQKEIRISWDKIKLKLPLIGPNVSKIATARFTRTLSTMLYSGIPMIQALRAAGETTGNKFVESKIEETVEGIEKGMGMTAQLAATNIFPPMMLSMIGIGEESGRLDEMLEKTAEYYDEEMEAALEALVTMLEPLLIVIMGVVIGTIVIAMYLPMFDVINTIQ
SIO_010081: HMPREF0389_RS01055
subclass of: SO_0000673
so part of: HMPREF0389_RS01055
location: 244802..245887
location: region:244802-245887:1
so has part: feature:244802-245887:1:exon

WP_014261887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244802-245887:1:exon

HMPREF0389_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01060
old locus tag: HMPREF0389_00420
so part of: sequence
location: 245988..246356
location: region:245988-246356:1
so has part: feature:245988-246356:1:exon
subclass of: SO_0000010

position:245988:1
position: 245988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246356:1
position: 246356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245988-246356:1:exon

HMPREF0389_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01060
old locus tag: HMPREF0389_00420
inference: COORDINATES: protein motif:HMM:NF019575.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prepilin-type N-terminal cleavage/methylation domain-containing protein
translation: MKLNKKRKGFTLVELIVVVVILGILMGLGAVRYADTRKSANTSVLQTNYKTCISVINLEMAKKQGVLPSKDDGMKAIRAAGIVDGQPVGSKYVYDGKKLTVTTTSPNEYSSPLPTLEYDFTN
SIO_010081: HMPREF0389_RS01060
subclass of: SO_0000673
so part of: HMPREF0389_RS01060
location: 245988..246356
location: region:245988-246356:1
so has part: feature:245988-246356:1:exon

WP_014261888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245988-246356:1:exon

HMPREF0389_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01065
old locus tag: HMPREF0389_00419
so part of: sequence
location: 246920..247609
location: region:246920-247609:1
so has part: feature:246920-247609:1:exon
subclass of: SO_0000010

position:246920:1
position: 246920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247609:1
position: 247609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246920-247609:1:exon

HMPREF0389_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01065
old locus tag: HMPREF0389_00419
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKMAEKFNIAFIEKTQYFGMWTAIQKERNSLLGSIEQGMKKLRAEHCMNRKKHSGVLYVYVLVVMLMVVTLSLITASLFDANLAGAASQRDDLQLYYYSKAGADWAVDLINTNKEGLDITGGSGRSLLEEIKTMSYSVGGSTPVWTGASDLVVGGEKVGHFEVEVDKVKRKVNKNNELDPSGTIEREYARVISTGSYAVGTKVSKETYTMTVLVPLEAPTEILYLVGRK
SIO_010081: HMPREF0389_RS01065
subclass of: SO_0000673
so part of: HMPREF0389_RS01065
location: 246920..247609
location: region:246920-247609:1
so has part: feature:246920-247609:1:exon

WP_041250736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246920-247609:1:exon

HMPREF0389_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01070
old locus tag: HMPREF0389_00418
so part of: sequence
location: 247623..249536
location: region:247623-249536:1
so has part: feature:247623-249536:1:exon
subclass of: SO_0000010

position:247623:1
position: 247623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249536:1
position: 249536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247623-249536:1:exon

HMPREF0389_RS01070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01070
old locus tag: HMPREF0389_00418
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: VWA domain-containing protein
translation: MKQKGLTLTELIIALTLGVLVMGIGVQLLFGATNNSVFATKEKQLQDANRIFLSYTDNAIKYSTATFTVADSTFNAPNNEKLTPDWNYIGLKKNIKVPGKMTQSGKDLDVKTALVAIDYKGKSKPDESKLKEEETLITISDGGSEHYFVQKIIAFSDLSNGKEFLYDLRFFKPTIKEGGGSRENNSLNYEMKLTLSDGTSQTIDYGTIESKLSSLNALQVVDRGSPSDPATAIAYRTDNVYLKKEGAHGVISLVLDNSGSMHTRDLKDSHGNKESRINILKVETGKLLKLLSTNKAADVELVPFDNNVLVRSDRKGGYIKPTFYSASKEYREKIIGSNVYEGKLKESMDSLGAYSGTNTGEGLRYAFYSIDEKNNDLLRERPEEHFRDYLIILVDGESNAATIIPTLEGNYISKNKSDFSKKKNTNPIYRDKNYDMDAFQKRQFKHFTNVTYEHRLDNSFNFKEPELRKYYQEGNACEVKIIKPTNTIYDSVTQELSLDYEHIVTQQNGKEESIQEAYASQKGSGAWLHNNWSAATGNTYVSKVGKLYNTPDNYLKNSSPQSRKAIKDMVTKKRVYIIAFSRSVSTSGLNAIADEFSIKGDSKRVFRANSGEDLSKIFQEIGESINNDLWMVNGPKW
SIO_010081: HMPREF0389_RS01070
subclass of: SO_0000673
so part of: HMPREF0389_RS01070
location: 247623..249536
location: region:247623-249536:1
so has part: feature:247623-249536:1:exon

WP_014261890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247623-249536:1:exon

HMPREF0389_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01075
old locus tag: HMPREF0389_00417
so part of: sequence
location: 249545..251473
location: region:249545-251473:1
so has part: feature:249545-251473:1:exon
subclass of: SO_0000010

position:249545:1
position: 249545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251473:1
position: 251473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249545-251473:1:exon

HMPREF0389_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01075
old locus tag: HMPREF0389_00417
inference: COORDINATES: protein motif:HMM:NF019575.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prepilin-type N-terminal cleavage/methylation domain-containing protein
translation: MKKNKGMTIVEVIISLVILVIISSMVLSVSKSYLVQFSTVRRDITAEGFGRRGNTEKTIEEIENLIAVRNEISDIVSSSEQQIKYIDLELKKPSLSAADKDKLNDEKSHLVALMGQKKKEEQNAKKNLEPYLDKKNSWTYVKLKLDSTEISKKEDPNVDFVYITSPNTITKHSITGWVFGTTSSQKIPILSDIVRYLHSDTTANREQQVADNVTGQTLYAKSEYVPGFENRDNLEQVAWYQSRPGYHIFPLDLNKLSLNDSEKEKLQKLLEGNEFYPVFPTDYNYISKKGVSGPGYTDKKIQIANTMENGFVVCGIRPYTKQGILGRLVGSTPIYISKLPFGKDDYLFREDISIINPNKLLKKYPPDTASNIKVKELYAWNNEEASSTQGQFSVPLGKEGVPYLLQPEQTGIIKENGTEFETKSRYLSFAGDTVGVVSPLREKQFNFFVVFGRGSTVNQEGNIISIPFLRDNVKATEITATGSGNEVRIDKVTVLAKIGFDKIQLIQPEQVLVSKTGKQCKVEEEMLATKDISNDMKKVEFGKKAGIFMVDKKKNNLSVELNGENLGNFNVSKWNLYDNMNSSVYFGSLAQIDDVKLSTEAAEKNEYKSAEVHVYEMVATKPKTSGGIKDQTDALKDKYGIE
SIO_010081: HMPREF0389_RS01075
subclass of: SO_0000673
so part of: HMPREF0389_RS01075
location: 249545..251473
location: region:249545-251473:1
so has part: feature:249545-251473:1:exon

WP_014261891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249545-251473:1:exon

HMPREF0389_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: pilM
locus tag: HMPREF0389_RS01080
old locus tag: HMPREF0389_00416
so part of: sequence
location: 251520..252941
location: region:251520-252941:1
so has part: feature:251520-252941:1:exon
subclass of: SO_0000010

position:251520:1
position: 251520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252941:1
position: 252941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251520-252941:1:exon

HMPREF0389_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: pilM
locus tag: HMPREF0389_RS01080
old locus tag: HMPREF0389_00416
inference: COORDINATES: protein motif:HMM:NF022554.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pilus assembly protein PilM
translation: MFGKSKSMKKNKETGPLEQEQKNNRSQEKKKPFSKNKASKKTKNSKIKNRTVLSLDFGSHEIKGVYGKVENNKVLVNSIFKGSVENSWYRDGRVENMDAAKNNMIDILKKNKIKNTDAVCTVESTDIIKREITIPKVEEKDILPLINYEIGQYLPIDIDSYVIQYKVLSEFVENDLNKLQVLVTAMPKPIVENLLQLVQSCQLTPYVLDVHFNSLEKLIQMEIASGTDGRNNWDKNVALVDFGVQKTNITLFSNGKYAFNSIIDYGEKDLYDIVKSKCNEPNRLSLDEIHHIMDGMFVSFEPEKTENIGESDVEAGHENLSQEYPYLNTETPVAPYGNSEQGINNFEMTSQNTLTNEVDKIVQETGIESLRQTYMNFSNVADLNQSMVRSISQLADEINKTIRYFAMKKVQNQVDKIYLYGGSSKIKGLEAFLENYCDISAENVPRLYCVQLNKNSDFDVSQYLNALGAIIRL
SIO_010081: HMPREF0389_RS01080
subclass of: SO_0000673
so part of: HMPREF0389_RS01080
location: 251520..252941
location: region:251520-252941:1
so has part: feature:251520-252941:1:exon

WP_041250738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:251520-252941:1:exon

HMPREF0389_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01085
old locus tag: HMPREF0389_00415
so part of: sequence
location: 252954..253625
location: region:252954-253625:1
so has part: feature:252954-253625:1:exon
subclass of: SO_0000010

position:252954:1
position: 252954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253625:1
position: 253625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252954-253625:1:exon

HMPREF0389_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01085
old locus tag: HMPREF0389_00415
inference: COORDINATES: protein motif:HMM:NF016992.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PilN domain-containing protein
translation: MRDFNFFAPYLKKNKKQFDVGAFLKTALAIVLAAILVLTAFLYMRLNQQKKRLDQLQTEIENAEYQAQYQEAQKAFSEVEELKLEKEFFVRLQGAMMEVHRVNEHFMQFLGKEVIKDLYLNDIAIQNRQITLNGTALSKHAIAQFERDLRKTDTFDDVKITEIHKKGDSENYYMFNMVVKSKFGEHSGNATQVNQTDTNSMTKNAGGENDEVKDKEKDTKENK
SIO_010081: HMPREF0389_RS01085
subclass of: SO_0000673
so part of: HMPREF0389_RS01085
location: 252954..253625
location: region:252954-253625:1
so has part: feature:252954-253625:1:exon

WP_014261893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252954-253625:1:exon

HMPREF0389_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01090
old locus tag: HMPREF0389_00414
so part of: sequence
location: 253582..255111
location: region:253582-255111:1
so has part: feature:253582-255111:1:exon
subclass of: SO_0000010

position:253582:1
position: 253582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255111:1
position: 255111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253582-255111:1:exon

HMPREF0389_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01090
old locus tag: HMPREF0389_00414
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSKTKKKTQKKISKREENLLLGLAIVVIVALYYYTVAGNLMGKTSALGNEIQQFQETKEQMDTVIAQSEIKQTEAEELKTEIFPIAKKYFGKTEQEEFIMQINRLNQASGLDIVSIQFSEYASISLDGETQDASSEEANTDETNTEETDSTSGETVSTEGADTAEGQANTEKPNEQLSVDVNHLMDNKESSESEEEVVDSNIKLMQAQIEFKGTYAQVLKLLHEIDNNPKNIISSELTMAREGDAIHGEKETKMTGNIRLSFYQVTDVDKYVQAVPGVLDTLPLPKSGRINPYLSYSWAWKKDVPASSDPLNIIPSGVRPPSDTVPNKKSNKKQTIPSGKKWGSKVSLKNKEIFGFENGDIVVKGSGPQIAVQGEITDGNFAKGSKAGRLTYAFTGNTDGEKAYIDLTSSNITIKQKVEGIGFSVYSDKELPHEVGLRMTDANGQEYLIVFAKEISWTGWKEILYDLHGIKNYPIKIDGIYVEGKKDSGALEGSLIFDNIFINVLQYE
SIO_010081: HMPREF0389_RS01090
subclass of: SO_0000673
so part of: HMPREF0389_RS01090
location: 253582..255111
location: region:253582-255111:1
so has part: feature:253582-255111:1:exon

WP_041250739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253582-255111:1:exon

HMPREF0389_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01095
old locus tag: HMPREF0389_00413
so part of: sequence
location: 255238..255960
location: region:255238-255960:1
so has part: feature:255238-255960:1:exon
subclass of: SO_0000010

position:255238:1
position: 255238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255960:1
position: 255960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255238-255960:1:exon

HMPREF0389_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01095
old locus tag: HMPREF0389_00413
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMFEFLPYLLAFFSLSLLFFIKILPYHPVWLLLPIGMQALLVAGTNSLLERGVHYFGNSEKESIFSFPELSFFNMKDRVAESIIAMGFLREKNEDDSETESEKKNSSEGTSQKEQDILEGESEETKEFVTESECSGLSSQATEQLSASNMTSQENTESTEEEPENSVQDASLDEQENESCEILFLQADIFFVQGEIKENKKILFYIFDKYADTEVGNRAKKELLRLYGEEVFLEERLNIE
SIO_010081: HMPREF0389_RS01095
subclass of: SO_0000673
so part of: HMPREF0389_RS01095
location: 255238..255960
location: region:255238-255960:1
so has part: feature:255238-255960:1:exon

WP_156775223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255238-255960:1:exon

HMPREF0389_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01100
old locus tag: HMPREF0389_00412
so part of: sequence
location: 255957..257198
location: region:255957-257198:1
so has part: feature:255957-257198:1:exon
subclass of: SO_0000010

position:255957:1
position: 255957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257198:1
position: 257198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255957-257198:1:exon

HMPREF0389_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01100
old locus tag: HMPREF0389_00412
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIIERTVSRMLRPDTMPTVIISVEEGINCGNVEQILFNRKRKCIDSFVVSKLDENGIPLTEDDVDYVLPFSDLEGMGDYAIIIMRDSVILKKKGQVERKEVYLGKSTLIGDIVVSLKGNKVGTVVDCEFSEEGDISSIFVELTKSEKVERFDAFSVMSIGNGIVIVRTTEQDVSPFKKNDVVQDFVRTKENPEYSYIKHDWNMKSEETDLSVVPAVEQTEASDVEDKADEITQFIPKMEVVKEVETKELSETEEEIEHTLENNLKFHRVVEEESVQNDVMPVENDTICIEEETAQDEVVQIVENSSEIKTEPAEEAAAQDEAEHIEEKKDEITVSERRRHPKANQGLVEDNQLIQKFIDKQKVLLLGRVLTRDILDAEGNVLLMKGTKITEDIFDIARQSRKDAIVEMAMFSA
SIO_010081: HMPREF0389_RS01100
subclass of: SO_0000673
so part of: HMPREF0389_RS01100
location: 255957..257198
location: region:255957-257198:1
so has part: feature:255957-257198:1:exon

WP_041250740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255957-257198:1:exon

HMPREF0389_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01105
old locus tag: HMPREF0389_00411
so part of: sequence
location: 257276..258325
location: region:257276-258325:1
so has part: feature:257276-258325:1:exon
subclass of: SO_0000010

position:257276:1
position: 257276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258325:1
position: 258325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257276-258325:1:exon

HMPREF0389_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01105
old locus tag: HMPREF0389_00411
inference: COORDINATES: protein motif:HMM:NF023650.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidoglycan binding domain-containing protein
translation: MKKLSQIKGLFAFVSMCIFTVLGLFLFTVGQPGEMKIGIEEHFYHIASKEDLDAELQKNFPTGFYLKTVYDVEKSMFVPFSELGVSYLSPKQEKYVNFFLEHKTLYKVWKAIPVKKSLEPIQISQQNLYYDKETLNKSISEQSEKFRSSSEDAFLMQIDGQIQVIPEKNGFQVITDDLADTLLEAIENQNYDNVFVTGELLFPDFKTSDISKYKLLLNQIVSDQLEDTSVQDNLLYIFSSLNNMRIPFGQQLTVSNNVENRIAVLSEKSLFDEKTKKEVNQLFDHLFDSLKQKGFIIEQYQSDTISIGEQVAGNHLCPVLKIKNNKYKSIIFSCYIKDNQLNLLVIAEK
SIO_010081: HMPREF0389_RS01105
subclass of: SO_0000673
so part of: HMPREF0389_RS01105
location: 257276..258325
location: region:257276-258325:1
so has part: feature:257276-258325:1:exon

WP_169308499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257276-258325:1:exon

HMPREF0389_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01110
old locus tag: HMPREF0389_00410
so part of: sequence
location: 258327..259115
location: region:258327-259115:1
so has part: feature:258327-259115:1:exon
subclass of: SO_0000010

position:258327:1
position: 258327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259115:1
position: 259115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258327-259115:1:exon

HMPREF0389_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01110
old locus tag: HMPREF0389_00410
EC number: 3.4.23.-
EC number: 3.4.23.43
inference: COORDINATES: protein motif:HMM:NF013632.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: A24 family peptidase
translation: MEILMLIMIFYIGTCFGSFYNVVIDRLPREINFVHGRSYCPSCKHSLSTVDLFPIISFLFLRGKCRYCKTSIPIRSLLIEILSGLLFFLSFYKYGWTSFTLIQVVFWGMLMIVGFIDYDTMYIYDAMLLFYFIIFGIYYGIADFANIWMHIKGAVYCFVIFSVIYFLAKLYYGQEAFGFGDVLLNGVLGFYLGSHNTFLICFLPFYVAAVDLLFQRIFFRNISLNREVSFGPYMCISAWIISLYGKEIYIFLGKYLSIFGGV
SIO_010081: HMPREF0389_RS01110
subclass of: SO_0000673
so part of: HMPREF0389_RS01110
location: 258327..259115
location: region:258327-259115:1
so has part: feature:258327-259115:1:exon

WP_014261898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258327-259115:1:exon

HMPREF0389_RS08675
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS08675
old locus tag: HMPREF0389_00409
so part of: sequence
location: 259124..259855
location: region:259124-259855:1
so has part: feature:259124-259855:1:exon
subclass of: SO_0000010

position:259124:1
position: 259124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259855:1
position: 259855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259124-259855:1:exon

HMPREF0389_RS08675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS08675
old locus tag: HMPREF0389_00409
inference: COORDINATES: protein motif:HMM:NF013954.2
GO function: GO:0004040 - amidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucosaminidase domain-containing protein
translation: MKNKKMISIGMFFVVFFCSTIFSFAETRTLLTKNGGEVNLFEKTEKIEKTVKKIDGTAQQTVTSNLSLEQKKIADNKLIADNSNIITCSDLGEDAYNIINTDFLLKPSDVSEHFINNRLQGTALEGLGGAFKRAEEKYGVNALFLVSLAMHESNVGRSRIARDKNNLFGFQAYDRSPYSSAGRFMSREACIDHVAGYISRNYLSPSGKYFHGYSIESMNVCYATDKNWSQGIKARLNQLLLTY
SIO_010081: HMPREF0389_RS08675
subclass of: SO_0000673
so part of: HMPREF0389_RS08675
location: 259124..259855
location: region:259124-259855:1
so has part: feature:259124-259855:1:exon

WP_014261899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259124-259855:1:exon

HMPREF0389_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01120
old locus tag: HMPREF0389_00408
so part of: sequence
location: 259891..260682
location: region:259891-260682:1
so has part: feature:259891-260682:1:exon
subclass of: SO_0000010

position:259891:1
position: 259891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260682:1
position: 260682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259891-260682:1:exon

HMPREF0389_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01120
old locus tag: HMPREF0389_00408
inference: COORDINATES: protein motif:HMM:NF012613.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-layer homology domain-containing protein
translation: MKRLFTKKILTFVVMLTVCTASTYSYASTVWDDSGAKKIDSGMTLQPKSQNTKKTTEAKKDTSTKSADKKEETKKEQPKTISQNKNHKKSETQEAIEFAKQRGYAYIDKSGKFLPKKNIQRYEFIYMVNRAFGFKKTKKVNFVDVKKTDFYYNDVSITMGAGYLYTFKKNTVFGPKKYFYRWELPHILGKAMNMKLSEKSSKTLMKYSDGKKVPKSARGSVSYFIEKGWMKPKSKKNFGTHDILTKEEMAYVLYQLHKEGYIK
SIO_010081: HMPREF0389_RS01120
subclass of: SO_0000673
so part of: HMPREF0389_RS01120
location: 259891..260682
location: region:259891-260682:1
so has part: feature:259891-260682:1:exon

WP_014261900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259891-260682:1:exon

HMPREF0389_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: uvrB
locus tag: HMPREF0389_RS01125
old locus tag: HMPREF0389_00407
so part of: sequence
location: 261032..263002
location: region:261032-263002:1
so has part: feature:261032-263002:1:exon
subclass of: SO_0000010

position:261032:1
position: 261032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263002:1
position: 263002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261032-263002:1:exon

HMPREF0389_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: uvrB
locus tag: HMPREF0389_RS01125
old locus tag: HMPREF0389_00407
EC number: 3.1.25.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002843903.1
GO component: GO:0009380 - excinuclease repair complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006289 - nucleotide-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excinuclease ABC subunit UvrB
translation: MPKFNLTTSYQPTGDQPKAIDDMVNSIQQKNKFQTLLGVTGSGKTFTMANIIQQTQKPTLVIAHNKTLAAQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKDASINDEIDKLRHSATAAVIERRDVIIVASVSCIYGLGDPDDYRYMMVSLRPQMIKDRDEVIKQLVEIQYERNDINFIRGTFRVRGDILEIMPANTDIKGLRVEFFGDEIERIVEIDHLTGEIIGELRQASIFPASHYVTTKEKLEQAIVGIGKELQERLQYFRENNFLLEAQRLEQRTMYDIEMLREIGTCKGIENYSRHLTGRKAGERAFTLMDFFDDDYLIIVDESHATIPQLNAMYSGDRARKESLIDYGFRLPSAADNRPLKFEEFEGMINQILFVSATPGKYEMEHSSCFGEQIIRPTGLLDPVIEVRPIDGQIDDLLHEIQNTVQKNERVLVTTLTKKMAESLTDYLKQAGILVEYLHSDVETLERIRLIRNLRLGEFHVLVGINLLREGLDIPEVSLVAILDADKEGFLRSETSMIQTIGRAARNADGRVIMYADTITKSMKSAIDETSRRREIQNRYNEEHGIVPKTINKEVRQEISMLVAEKEETYSVKEVISRQELIEKIEVLKEQMLEAAENLNFEQAAIYRDSILQLEKKLNH
SIO_010081: HMPREF0389_RS01125
subclass of: SO_0000673
so part of: HMPREF0389_RS01125
location: 261032..263002
location: region:261032-263002:1
so has part: feature:261032-263002:1:exon

WP_014261901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261032-263002:1:exon

HMPREF0389_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: uvrA
locus tag: HMPREF0389_RS01130
old locus tag: HMPREF0389_00406
so part of: sequence
location: 263021..265873
location: region:263021-265873:1
so has part: feature:263021-265873:1:exon
subclass of: SO_0000010

position:263021:1
position: 263021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265873:1
position: 265873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263021-265873:1:exon

HMPREF0389_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: uvrA
locus tag: HMPREF0389_RS01130
old locus tag: HMPREF0389_00406
EC number: 3.1.25.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012160097.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006289 - nucleotide-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excinuclease ABC subunit UvrA
translation: MNKDKIIIKGANENNLKNVDLELPRNKFIVFTGLSGSGKSSLAFDTIYAEGQRRYVESLSSYARQFLGKTNKPNVEYIEGLSPSISIDQKTTSHNPRSTVGTVTEIYDYMRLLFANVGIAHCPICGDEIKSMTIQEVVDKVMELPERTKIQIISPVIRSKKGKHEKVLESIKKEGFIRIRVNGEPKEITDEIELEKNKKNSIDVIVDRIVIRADIEKRLADSIEIAVNMSGGMVNIAIVDGEEKLYSTKFSCSKHDVTIEEISPRMFSFNAPYGACPTCNGLGFMSQIDPELVIPNKTLSLREGAVEPWMTSDKNHEESYYFKMIKVLAENNNISLDTSYQDLPTWFQKKLLYGTSEMLTFSFESKFTDEKKEYNAPFEGVIPNLERRLVNSSSELIREKMQKYVIEKACPDCMGTRLKKEVLSITVGDKNISELTNLSVESHLEFLENLKLSEKNAFIAKEILKEINNRLTFLKDVGLEYLTLSRKASTLSGGESQRIRLATQIGSALVGVLYVLDEPSIGLHQRDNDRLIHTLKNLTAIGNTLIVVEHDEDTMHAADQIIDIGPGAGIHGGQIIAQGTVEELKQNSNSITGQYLSGKRRIAIPKTRRMVDTEKQITIIGAAENNLKNITVSIPLGVFTSITGVSGSGKSSLINEILYKATAAKINHSREKAGKYKQITGLEHIDKVVNIDQSPIGRTPRSNPATYTGVFDFIRDVFAETQESKARGYKKGRFSFNVSGGRCEACKGDGILKIEMHFLPDVYVPCEICKGDRYNRETLEIKYKGKSISDILNMNVEEACSFFENIPKIKRKLDTLMEVGLSYITLGQPSTELSGGEAQRIKLAAELSKKGTGNTLYILDEPTTGLHMDDVSKLLSVLQKLTDNGNTVVVIEHNLDCIKVSDYIIDLGPNGGNNGGEVIFEGTPEEIIHCKHSYTGEYLKKYIDYEEKLV
SIO_010081: HMPREF0389_RS01130
subclass of: SO_0000673
so part of: HMPREF0389_RS01130
location: 263021..265873
location: region:263021-265873:1
so has part: feature:263021-265873:1:exon

WP_014261902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263021-265873:1:exon

HMPREF0389_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01135
old locus tag: HMPREF0389_00405
so part of: sequence
location: 265870..266508
location: region:265870-266508:1
so has part: feature:265870-266508:1:exon
subclass of: SO_0000010

position:265870:1
position: 265870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266508:1
position: 266508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265870-266508:1:exon

HMPREF0389_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01135
old locus tag: HMPREF0389_00405
inference: COORDINATES: protein motif:HMM:NF014668.2
GO process: GO:0006282 - regulation of DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: regulatory protein RecX
translation: MIIEKIVKTKNRYHLFCSENNEITVTEDLFYLLNLTVGKDLAMIDNWNEKLEEDRVRQCFQSAIQKLNCSMLSEMQLKRKLEKENFDISHIKQALLRLKELNFINDKLLSEELIRSAEKQNLSKKQIESKLFQKGIQESVWKEQMEQETSEEGEIAKAYAFCCKKIKSYRSKTKEEIRKKLYYSLNYKGFSYSVSNKAVSKILDETIFEENS
SIO_010081: HMPREF0389_RS01135
subclass of: SO_0000673
so part of: HMPREF0389_RS01135
location: 265870..266508
location: region:265870-266508:1
so has part: feature:265870-266508:1:exon

WP_014261903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265870-266508:1:exon

HMPREF0389_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: typA
locus tag: HMPREF0389_RS01140
old locus tag: HMPREF0389_00404
so part of: sequence
location: 266591..268423
location: region:266591-268423:1
so has part: feature:266591-268423:1:exon
subclass of: SO_0000010

position:266591:1
position: 266591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268423:1
position: 268423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266591-268423:1:exon

HMPREF0389_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: typA
locus tag: HMPREF0389_RS01140
old locus tag: HMPREF0389_00404
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009526765.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translational GTPase TypA
translation: MILKKEQIRNVAIIAHVDHGKTTLVDSLLKQSGVFRQNQEIEERVMDSNDLEKERGITILSKNTAVMYGDVKINIIDTPGHADFGGEVERILKMVDGVVLVVDAFEGPMPQTKFVLKKALELNLPSVICVNKVDRPEARPNEVVDEVLDLFIELDANEIQLDSPFIFASAKKGISGTDADQLQDSMKPLFEAIIENIPCPNGDEDGLTQVLISTIDYNEYIGRIGIGKVERGSVSIGEDLWVSNYENPDKSYKVRIGKLYEYDGLKRVEIEEAITGSIVAISGIEDIEIGDTITSIDDKQPLPFVKISEPTLAMTFSVNNGPFAGQDGKYVTSRQIRARLHKELNTNVSLRVEDTDSADSFRVAGRGELHLSILMEQMRREGYELMVSKPEVLMKKDKNDKLIEPIERVIIDVPEEFMGAVIEKLGARKGEMVNMVQSKGGYTRIEFLIPTRGMIGYRSEFLTDTKGNGILNTLFEGYEPYKGEIPRRSQGSLVSFETGTAVGYGLYNAQERGILFVSPGDKVYEGMIVGENAKPMDIDVNVCKRKQATNMRASGSDDALRLSPPKKMSLEEALEFIEKDELVELTPKNMRIRKRILDKQQRAKQRAKNL
SIO_010081: HMPREF0389_RS01140
subclass of: SO_0000673
so part of: HMPREF0389_RS01140
location: 266591..268423
location: region:266591-268423:1
so has part: feature:266591-268423:1:exon

WP_207635084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266591-268423:1:exon

HMPREF0389_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01145
old locus tag: HMPREF0389_00403
so part of: sequence
location: 268713..269462
location: region:268713-269462:1
so has part: feature:268713-269462:1:exon
subclass of: SO_0000010

position:268713:1
position: 268713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269462:1
position: 269462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268713-269462:1:exon

HMPREF0389_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01145
old locus tag: HMPREF0389_00403
inference: COORDINATES: protein motif:HMM:NF013073.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: C40 family peptidase
translation: MKRHGSLSKRLSVILCTGMLIGFLPGEISANQNIVDPDVSYLAQDEAELYYETSSKQVISLLSKGDSVIVTDKGKEYSKVLLENGQSGYIKNELLTDSIKVSEDEDSQEATSRGLFRDKKIENKNSASLISFAKGKLGSPYSYGSRGPNKFDCSGFVGYSYEKALGIKLPRDSRSMSVTGVSIKKSDLQEGDLVFFHTGGGNRVSHVGIYIEDGNFIHASSGNVQKVIISNLNFGYYAKCYHSAKRVIK
SIO_010081: HMPREF0389_RS01145
subclass of: SO_0000673
so part of: HMPREF0389_RS01145
location: 268713..269462
location: region:268713-269462:1
so has part: feature:268713-269462:1:exon

WP_014261905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268713-269462:1:exon

HMPREF0389_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01150
old locus tag: HMPREF0389_00402
so part of: sequence
location: 269650..271632
location: region:269650-271632:1
so has part: feature:269650-271632:1:exon
subclass of: SO_0000010

position:269650:1
position: 269650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271632:1
position: 271632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269650-271632:1:exon

HMPREF0389_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01150
old locus tag: HMPREF0389_00402
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003512494.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: toprim domain-containing protein
translation: MKKEKKQNVDYGNNSISSLKGPDRVRLRPAVIFGSDGIEGCQHAMFEILSNAIDEAREGNGTKINVIRHSDFSVTIEDFGRGAPLDFNEKENRYNYELIFEELYAGGKYNTNQGKNYEYSLGLNGLGCCATQYSSEYMDVKVKRDGYLYQVHFEKGYSIGGLKKEKDSSPGTYTKIKFKPDTEVFTDINITLEFYCDTLKRQAVINKGVSFHLFDEISNSEFSYCYENGIVDYVNELIGDNYISSPHSVSLETKGRDREDKPFYKLKADICFAFSNEANRLEFYHNSSYLEHGGSPEKATKSAFVSAVDSYIKKLGKYYKNEKKISFSDIEDSLLLVINSFSTMTSYENQTKKAITNKFIQQALTDFLKEQLEIYFTENQQEGEKIIDQILVNKHSRESAEKTRMAIKRNLKTTFDPLTRIKKFVDCRTKNPDERELYIVEGDSALGSCKQGRNSDFQAIIPIRGKILNCLKSDSARIFANDIITDIISILGTGVEMNSKHLKDIADFNMDNLRWNKIIICTDADVDGFQIRTLLLTMFYMLTPTLIEKGYIYIAESPLYEISSKNKTYFAYSEKEKEAILSKIKGSYHVQRSKGLGENEPDMMWETTMNPETRRLIQVTEYNPEDTKIAFDTLLGDDLQSRKEYIENFGHLYLEQVDEM
SIO_010081: HMPREF0389_RS01150
subclass of: SO_0000673
so part of: HMPREF0389_RS01150
location: 269650..271632
location: region:269650-271632:1
so has part: feature:269650-271632:1:exon

WP_014261906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269650-271632:1:exon

HMPREF0389_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01155
old locus tag: HMPREF0389_00401
so part of: sequence
location: 271654..273855
location: region:271654-273855:1
so has part: feature:271654-273855:1:exon
subclass of: SO_0000010

position:271654:1
position: 271654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273855:1
position: 273855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271654-273855:1:exon

HMPREF0389_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01155
old locus tag: HMPREF0389_00401
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004034210.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit A
translation: MKQKTKKNSTQKYIETNKRTENIVDTLKQNYMPYAMSVIVSRAIPEIDGFKPSHRKLLYTMYRMNLLNANRTKSANIVGQTMKLNPHGDSAIYETMVKLSRGNESLLHPYIDSKGNFGKSTSRDMQFAAPRYTEAKLMPLCKELFGEIEKNTVDFVDNYDSTMKEPVLLPTTFPNILLKANKGIAVGMASSIPSFNLSEICNYTIAYLKDINCNMFDFILGPDFPSGGELLFDEEEMKSIYETGRGSFKLRGKYRYLKKEQLIEIYEIPYTTTVEVIIEKIIDLIKDGTLREITDIRDETDLNGLKITIDVRKNADVESMMGKIFKYTTLEDSFSCNFNVLIDNKPKILGIKDIIFHWLNFRRQCIVRRTLNEMEDKSKRLFLLQGLEKIILDIDKAIAIIRNTEKEIDVLPNLMNAFAIEEKQAEYILEIKLRNLNKEYILKKISEIKELEEEITKLEEIYHSQKLQDKLIISELKKIIKTYGQERKTTIVSKKDVVVYSKENFTEDYAVTMFLTKDGYLKKIPELSLRAYSEQKLKDNDSILQQIEMNNTDVFMLLSTNNVLYQVKVSDLKDTKASLLGLFLPNYLKMEENERIIQMIFPEEYEGYMVYFFENGKVAKINFSSYQTKSFRKKLQNVYSTQSPLVDCFHIKKDETFVIFTDNYRCLSIDTSSIPEKISRSSQGVKVINLNKNAKVERIELLESDDREWDFCKTKTIPSSAKKNKRLTTISFL
SIO_010081: HMPREF0389_RS01155
subclass of: SO_0000673
so part of: HMPREF0389_RS01155
location: 271654..273855
location: region:271654-273855:1
so has part: feature:271654-273855:1:exon

WP_014261907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271654-273855:1:exon

HMPREF0389_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01160
old locus tag: HMPREF0389_00400
so part of: sequence
location: 273878..274813
location: region:273878-274813:1
so has part: feature:273878-274813:1:exon
subclass of: SO_0000010

position:273878:1
position: 273878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274813:1
position: 274813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273878-274813:1:exon

HMPREF0389_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01160
old locus tag: HMPREF0389_00400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013361134.1
GO function: GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR01212 family radical SAM protein
translation: MEPYYVYSNFLKEKYGEKVYRIPINLPLTCPNRDGKIGVGGCTFCGDVGVGFESRNNLESVEEQLQKNINYIGSKYHAKKFIAYFQNYTNTYVEQSKFEECILSSIREDVVEIAISTRPDCVTEEQLKFLKTVNDRYHIEINMELGLQTVNYHTLKNINRGHTLAEFIDCIIRCKKYGFQTTVHMILNLPQDSKEDVIEGAKILSALEVNGVKLHSLYIPKGSIMAQEYERGQFQIGTMEDYIERVAFFLSYLSPDIAIQRLIGRAPEKDVISCNFNTSWWKIKDYIIEYMNQNNLYQGCYFNYLGGKITK
SIO_010081: HMPREF0389_RS01160
subclass of: SO_0000673
so part of: HMPREF0389_RS01160
location: 273878..274813
location: region:273878-274813:1
so has part: feature:273878-274813:1:exon

WP_014261908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273878-274813:1:exon

HMPREF0389_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01165
old locus tag: HMPREF0389_00399
so part of: sequence
location: 274987..275670
location: region:274987-275670:1
so has part: feature:274987-275670:1:exon
subclass of: SO_0000010

position:274987:1
position: 274987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275670:1
position: 275670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274987-275670:1:exon

HMPREF0389_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01165
old locus tag: HMPREF0389_00399
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005367881.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylaminoimidazolesuccinocarboxamide synthase
translation: MKKIYEGKTKDVFDLENGNYLLKFKDDVTGVDGVFDPGANEVGLRIEGAGKAGLKLTKFFFEKINNAGIATHYVDCNIDESNMTVLPARVFGEGVEVICRYRAVGSFLRRYGKYVKEATPLDAYVEVTLKDDDRNDPLITDDALDMLGILTKEEYATLVSMTKKIGAIVKEELAKKELELYDIKFEFGRVGEDAHIALIDEISGGNMRAYKNGEYVEPLTLEKMMLS
SIO_010081: HMPREF0389_RS01165
subclass of: SO_0000673
so part of: HMPREF0389_RS01165
location: 274987..275670
location: region:274987-275670:1
so has part: feature:274987-275670:1:exon

WP_014261909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274987-275670:1:exon

HMPREF0389_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01170
old locus tag: HMPREF0389_00398
so part of: sequence
location: 275881..276150
location: region:275881-276150:1
so has part: feature:275881-276150:1:exon
subclass of: SO_0000010

position:275881:1
position: 275881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276150:1
position: 276150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275881-276150:1:exon

HMPREF0389_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01170
old locus tag: HMPREF0389_00398
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020814718.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ACT domain-containing protein
translation: MKAVITVIGKDRVGIVSQVSQKIAECQLNILDINQTLMEQYFTMIMLVNLEQSKHDIATLSNIFSDLGTEMGLSIRIQHENLFDSMYHV
SIO_010081: HMPREF0389_RS01170
subclass of: SO_0000673
so part of: HMPREF0389_RS01170
location: 275881..276150
location: region:275881-276150:1
so has part: feature:275881-276150:1:exon

WP_014261910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275881-276150:1:exon

HMPREF0389_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01175
old locus tag: HMPREF0389_00397
so part of: sequence
location: 276166..277521
location: region:276166-277521:1
so has part: feature:276166-277521:1:exon
subclass of: SO_0000010

position:276166:1
position: 276166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277521:1
position: 277521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276166-277521:1:exon

HMPREF0389_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01175
old locus tag: HMPREF0389_00397
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008677255.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PFL family protein
translation: MNRFNIQETIKMLDEQNLDIRTVTMGISLLDCCDSNAERSCTKIYDKITYLAEHLVSTSDEIGNKYGIKVVNKRISVTPISLIAGATNETNYVSFAKVLDKAAKETGVNFVGGFSALVHKKATQSDMILMNSIPEALSETDLVCSSVNVGSTKTGINMDAVALMGRIIKQTAYLTKEKDSLGCAKLVVFCNAVEDNPFMAGAFHGVGEGDNSISVGISGPGVVKSALEKVKGESIQVVSEKIKQTSFKITRMGELIGKEVAQQLNLPFGIVDLSLAPTPAIGDSVARILEEIGLEQVGTHGTTAALALLNDAVKKGGTMASSNVGGLSGAFIPVSEDEGMIAAAENKTISLDKLEAMTCVCSVGLDMIAIPGDTPAETISAIIADESAIGMINQKTTAVRVIPVYGKKEGEVVEFGGLLGYAPIMKVNSAKSNLFIERGGFIPAPIHSFKN
SIO_010081: HMPREF0389_RS01175
subclass of: SO_0000673
so part of: HMPREF0389_RS01175
location: 276166..277521
location: region:276166-277521:1
so has part: feature:276166-277521:1:exon

WP_014261911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276166-277521:1:exon

HMPREF0389_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01180
old locus tag: HMPREF0389_00396
so part of: sequence
location: complement(277679..278392)
location: region:277679-278392:-1
so has part: feature:277679-278392:-1:exon
subclass of: SO_0000010

position:277679:-1
position: 277679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278392:-1
position: 278392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277679-278392:-1:exon

HMPREF0389_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01180
old locus tag: HMPREF0389_00396
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003418467.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YebC/PmpR family DNA-binding transcriptional regulator
translation: MGRIHNIEGRKNKQDSKRAAVFTKYARLITVAVKEGGPDPEYNASLKTAIEKAKAMNMPNDNIERAIKKGTGAGDSENFESIVYEGYGPGGVAMIIETLTDNKNRTAGNVRYYLDKNGGNLGTSGCVSFMFDRKGIILIKKSDDISEDSLMEVALEAGAEDFLSEEDGFEIYTDPSSVYEVKDAIQTKGYDILSAEVSMIPQTYTAVEGSAVKQLEKLLDMLDDDDDIQEVYTNQQV
SIO_010081: HMPREF0389_RS01180
subclass of: SO_0000673
so part of: HMPREF0389_RS01180
location: complement(277679..278392)
location: region:277679-278392:-1
so has part: feature:277679-278392:-1:exon

WP_014261912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277679-278392:-1:exon

HMPREF0389_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01185
old locus tag: HMPREF0389_00395
so part of: sequence
location: 278561..278950
location: region:278561-278950:1
so has part: feature:278561-278950:1:exon
subclass of: SO_0000010

position:278561:1
position: 278561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278950:1
position: 278950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278561-278950:1:exon

HMPREF0389_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01185
old locus tag: HMPREF0389_00395
inference: COORDINATES: protein motif:HMM:NF024060.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3783 domain-containing protein
translation: MKKILLNGIDGIREDEIISTLKYFNLDQYASKITSSDLNQKVGYCLGIDGYVKENHNFSQDVSKIEFVFLAGLDRESVMNIINYMREHDIKRPIFSMITPTNIDWILGNLIEDVYEEHLMMTQGGESGK
SIO_010081: HMPREF0389_RS01185
subclass of: SO_0000673
so part of: HMPREF0389_RS01185
location: 278561..278950
location: region:278561-278950:1
so has part: feature:278561-278950:1:exon

WP_014261913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278561-278950:1:exon

HMPREF0389_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01190
old locus tag: HMPREF0389_00394
so part of: sequence
location: 278997..279878
location: region:278997-279878:1
so has part: feature:278997-279878:1:exon
subclass of: SO_0000010

position:278997:1
position: 278997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279878:1
position: 279878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278997-279878:1:exon

HMPREF0389_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01190
old locus tag: HMPREF0389_00394
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004845133.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO process: GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RluA family pseudouridine synthase
translation: MRLDQFISSNLPSISRSYIQKLIDEKRVLVNGKYEKKSFLLKSFDNIEIYIPEPKSIEISPENIPLNILFEDKDILIVNKEKGMVVHPAPGNYSHTLVNAILYHCKGNLSEINGYIRPGIVHRIDKDTSGILVIAKNNDAHQFLSEQFKEHSIQREYQLITFGNIKTTHLSIEQPIGRNPKNRLQMAVVPNGKPAITHLTVIENFKDKTYLKARLETGRTHQIRVHCTYIGHPLLGDSLYTNRKCEYQLQGQTLHAGYLGFVHPTSKKFIEFYSPLPEYFSHILRNETLKLQK
SIO_010081: HMPREF0389_RS01190
subclass of: SO_0000673
so part of: HMPREF0389_RS01190
location: 278997..279878
location: region:278997-279878:1
so has part: feature:278997-279878:1:exon

WP_014261914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278997-279878:1:exon

HMPREF0389_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01195
old locus tag: HMPREF0389_00393
so part of: sequence
location: 279947..280375
location: region:279947-280375:1
so has part: feature:279947-280375:1:exon
subclass of: SO_0000010

position:279947:1
position: 279947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280375:1
position: 280375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279947-280375:1:exon

HMPREF0389_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01195
old locus tag: HMPREF0389_00393
inference: COORDINATES: protein motif:HMM:NF019575.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prepilin-type N-terminal cleavage/methylation domain-containing protein
translation: MNKKLSKRNGFTLIEIIISITLLLLIATYGMLKYQNVKESAQQKLDIASAVSFAETLELALMDNPNCFNDKQIIQSNDPIVTKYTHSILAAKSKKYFGPFTATIKKSSADEYSFEITANNNKVYPQEESGNNNTNSMGKTKE
SIO_010081: HMPREF0389_RS01195
subclass of: SO_0000673
so part of: HMPREF0389_RS01195
location: 279947..280375
location: region:279947-280375:1
so has part: feature:279947-280375:1:exon

WP_014261915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279947-280375:1:exon

HMPREF0389_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01200
old locus tag: HMPREF0389_00392
so part of: sequence
location: 280377..281048
location: region:280377-281048:1
so has part: feature:280377-281048:1:exon
subclass of: SO_0000010

position:280377:1
position: 280377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281048:1
position: 281048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280377-281048:1:exon

HMPREF0389_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01200
old locus tag: HMPREF0389_00392
EC number: 5.4.99.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009531689.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0001522 - pseudouridine synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RluA family pseudouridine synthase
translation: MEKIQVLYEDNHVIVVVKPYRIPSQEDNSNDTDMLTIVKEYIKEKYQKPGNVFVGLVHRLDRVTGGLMVFAKTSKAASRLSEQIRTNQIEKKYLAVVHGSLKTSSGQLEDFIKKSSSKNIVSVCSKHDKNAKKCILNYHVISCLPDYSLINVHLLTGRSHQIRVQFSSRGHSIVGDVKYGSAEKLRGHIALWAYKLSFFHPTKKEKMEFTYFPGGHPFNLFHI
SIO_010081: HMPREF0389_RS01200
subclass of: SO_0000673
so part of: HMPREF0389_RS01200
location: 280377..281048
location: region:280377-281048:1
so has part: feature:280377-281048:1:exon

WP_014261916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280377-281048:1:exon

HMPREF0389_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01205
old locus tag: HMPREF0389_00391
so part of: sequence
location: 281160..281591
location: region:281160-281591:1
so has part: feature:281160-281591:1:exon
subclass of: SO_0000010

position:281160:1
position: 281160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281591:1
position: 281591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281160-281591:1:exon

HMPREF0389_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01205
old locus tag: HMPREF0389_00391
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013361361.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fur family transcriptional regulator
translation: MSISSLKSYSALLKTKGIKPSFQRVKIMEFLQNNHIHPSVNDIYFALIKEIPSLSKTTVYNTLNLMKECSLVKILNIDETEAHYDINTHPHGHFMCTKCGEICDIDTKLDEGSCNLLDGYIVEHIEFTLFGICPKCRHRCSSN
SIO_010081: HMPREF0389_RS01205
subclass of: SO_0000673
so part of: HMPREF0389_RS01205
location: 281160..281591
location: region:281160-281591:1
so has part: feature:281160-281591:1:exon

WP_014261917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281160-281591:1:exon

HMPREF0389_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: argS
locus tag: HMPREF0389_RS01210
old locus tag: HMPREF0389_00390
so part of: sequence
location: 281639..283342
location: region:281639-283342:1
so has part: feature:281639-283342:1:exon
subclass of: SO_0000010

position:281639:1
position: 281639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283342:1
position: 283342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281639-283342:1:exon

HMPREF0389_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: argS
locus tag: HMPREF0389_RS01210
old locus tag: HMPREF0389_00390
EC number: 6.1.1.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009529705.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arginine--tRNA ligase
translation: MNFKKLVYTLLQNILSTNNEIDIESLIEVPANPEMGDYSFPCFKLAKLYRKAPNLIAEDLVKQLPDTEEFESIKAISGYINFTINKKLLAKQVIETVLSEKENYGKSDYGKHKNVIVEYSSPNIAKPFHIGHIRSTVIGHALDRIYQSVGFNTIAINHLGDYGTQFGKLIVAFKKWGDRSVIEKDPINELLKLYVKFHEEAEVHSELEDEAREWFRKLEEDKDPEAVQLWQWIRDISLKEFDKVYSMLGIEYDSLAGESFYSDKMPAIIEHLENMNLLTDSQGAKIVDLEEYGMPPALIKKKDGSTLYITRDLAAAKYRKDTYDFYKNIYVVGAPQELHFKQWKKVHELSGYDWANDCIHVAFGTVSLEEGVLSTRKGRVVFLEDVLNKAIEKTKDIIQQKNPNLENLDEVAKQVGVGAIVFQELSNTRIKDYTFSWDRALTFEGETGPYTQYTHARCCSLLEKANVDLNTDIDFSILSTNNDAMKVIRIMSSFEDVLLRCAKKYEPHHLTRFVLDVCQAFNKFYHDNPILTANEKEKIAYLSLVQASQIVIKNALWILGMEAPRKM
SIO_010081: HMPREF0389_RS01210
subclass of: SO_0000673
so part of: HMPREF0389_RS01210
location: 281639..283342
location: region:281639-283342:1
so has part: feature:281639-283342:1:exon

WP_014261918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281639-283342:1:exon

HMPREF0389_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01215
old locus tag: HMPREF0389_00389
so part of: sequence
location: 283380..284126
location: region:283380-284126:1
so has part: feature:283380-284126:1:exon
subclass of: SO_0000010

position:283380:1
position: 283380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284126:1
position: 284126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283380-284126:1:exon

HMPREF0389_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01215
old locus tag: HMPREF0389_00389
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEQKYMNTVYYGNDELVYLTTRALFYDKQKNIISINKNRYVDELKLYKHLKKKGVGSLLSSLIPIILVNNSIETSFAATSLFFQWIKKGITVEEYASIYLLCTLVQNNTIEKDDIFNITHNNVFDKQDTILLERLKINLILQFESIVIQMLTFLEPANLSYNENLLLHLNEETTQTPNRMCEYFLKLKNHQINAPDYQGSFDIGKIFNLNQGDCINDSLLGQLSVSSKSENELELETKRGIVVLCRN
SIO_010081: HMPREF0389_RS01215
subclass of: SO_0000673
so part of: HMPREF0389_RS01215
location: 283380..284126
location: region:283380-284126:1
so has part: feature:283380-284126:1:exon

WP_014261919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283380-284126:1:exon

HMPREF0389_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01220
old locus tag: HMPREF0389_00388
so part of: sequence
location: complement(284140..285258)
location: region:284140-285258:-1
so has part: feature:284140-285258:-1:exon
subclass of: SO_0000010

position:284140:-1
position: 284140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285258:-1
position: 285258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284140-285258:-1:exon

HMPREF0389_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01220
old locus tag: HMPREF0389_00388
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018590966.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MGMKINSKSSKPHNILEKEYSMMKKCEELEIQFPAFFRDYFIFLKGSVSISSRYAYLIDIYSFFEYLIDSKFFETEYSSVKQIKQSDLKNITAREINYYIGEYCRKYEVKKEDTVVIFENQNKSLSRKKSSLTSLFKFLFRNEQMKHNLIDGFNPIKMPKLNPDAIKRLSIDETNELIHVINTGIGLTNHEKIYWEKTKYRDKAIIMIFITLGLRLSELEQLNITSINFKRKEILVFRKRGKEVLMPFNDTIEHSILQYINLERNHIIINDENDPLFLSLQGKRMTGRQIRQMIKKYTSIVLGDNEGYSPHKLRSTLASSLIERGFSIYDVQNLLDHDNVTTTQIYASHKKNVKKNIIENIDYIEDESEEKQ
SIO_010081: HMPREF0389_RS01220
subclass of: SO_0000673
so part of: HMPREF0389_RS01220
location: complement(284140..285258)
location: region:284140-285258:-1
so has part: feature:284140-285258:-1:exon

WP_014261920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284140-285258:-1:exon

HMPREF0389_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: pyk
locus tag: HMPREF0389_RS01225
old locus tag: HMPREF0389_00387
so part of: sequence
location: complement(285391..287139)
location: region:285391-287139:-1
so has part: feature:285391-287139:-1:exon
subclass of: SO_0000010

position:285391:-1
position: 285391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287139:-1
position: 287139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285391-287139:-1:exon

HMPREF0389_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: pyk
locus tag: HMPREF0389_RS01225
old locus tag: HMPREF0389_00387
EC number: 2.7.1.40
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003436250.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate kinase
translation: MNPLKKTKIVCTIGPSSGKKEVLKLLAENGMNVCRLNFSHGSHEEHQKKIDIIKEVREELNEPIAILLDTKGPEIRTGIFCKEEVELSTGQLFTLYMDDIIGDHTKCSVSYKHLVHDVKKDDIILIDDGLISMLVVEVSNEKIVCEVQNAGIIKNNKGINVPNVKINLPAITQKDREDIIFGIKNGIDFIAVSFVRKASDVLSIREILEQENAEYIQIISKIENQEGIDNIDDILMVSDGIMLARGDLGVEIPTEEIPIVQKRIIKKCNFLSKPVITATQMLDSMMRNPRPTRAEVTDVANAIYDGTDAIMLSGETASGKYPIESVKMMYNIAIKTEENLDYKNMLLEKSMAREMNITNAISHATCTTANDIGAKAIITATESGYTAKMVSSYRPNQMIIGIMHSPVVARQMGIVWGILPVNIDKITVSTDELFDLSINASISKGLIFPGDIVVITAGVPTRQTGSTNLIKVHVVTEILSQGIGIGDKTIIGVARKNLRDFQKNDILIAKYTEKEMVDYMENASAIVVEESGLTNHTAIVGLSLGKTVIVGAKNIVAKIEDGQIITISPKKGYVYKGNVTGV
SIO_010081: HMPREF0389_RS01225
subclass of: SO_0000673
so part of: HMPREF0389_RS01225
location: complement(285391..287139)
location: region:285391-287139:-1
so has part: feature:285391-287139:-1:exon

WP_014261921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285391-287139:-1:exon

HMPREF0389_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: pfkA
locus tag: HMPREF0389_RS01230
old locus tag: HMPREF0389_00386
so part of: sequence
location: complement(287196..288158)
location: region:287196-288158:-1
so has part: feature:287196-288158:-1:exon
subclass of: SO_0000010

position:287196:-1
position: 287196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288158:-1
position: 288158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287196-288158:-1:exon

HMPREF0389_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: pfkA
locus tag: HMPREF0389_RS01230
old locus tag: HMPREF0389_00386
EC number: 2.7.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003416974.1
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-phosphofructokinase
translation: MRRIAVLTSGGDAPGMNAAVRAVVRTAVYNNVEVYGVQRGFKGLIEGDFIKLNVSFVGDIIHRGGTVLRSARCLEFQNQESCRKCAVDLLNVFQIDGLIVIGGDGSFRGMTSLTEYGFSTIGIPGTIDNDLAYTDFTIGFDTAVNTVVEAMSKLRDTTSSHERITIVEVMGRRCGDIALYAGLSGGAEAILIPEVQYDLSQIAEQLIKSNNRGKKQSIIVVAEGVGNTEFISKEINHLTGFDTMTTILGHVQRGGNPSSRDRLLGSMMGNRAVDLLLNNITNRVVGVKDNQIMDMDINDALRSKKRFNREMYNLSKVLSI
SIO_010081: HMPREF0389_RS01230
subclass of: SO_0000673
so part of: HMPREF0389_RS01230
location: complement(287196..288158)
location: region:287196-288158:-1
so has part: feature:287196-288158:-1:exon

WP_014261922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287196-288158:-1:exon

HMPREF0389_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01235
old locus tag: HMPREF0389_00385
so part of: sequence
location: complement(288168..291623)
location: region:288168-291623:-1
so has part: feature:288168-291623:-1:exon
subclass of: SO_0000010

position:288168:-1
position: 288168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291623:-1
position: 291623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288168-291623:-1:exon

HMPREF0389_RS01235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01235
old locus tag: HMPREF0389_00385
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016728492.1
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit alpha
translation: MERKFTHLHLHTPYSLLDGFATIEDTIKKAKEDGMDAVAITDHGVMFGVVEFYKVALNYGIKPIIGCEVYVSYRTRFDKENIDKRSYHLILLAENNTGYQNLIKLVSLGFVEGYYYKPRVDIDLLKSYSEGIIALSACLAGEVQQSLLNNNYEEAKKVACRYREIFGEDNFFLELQNHGIEEQLKVNHLLRRLSLDTGIPLVATNDVHYVNRSDSKNHDILLCIQTGKTLDDKDRMEFKTDQFYFKTREEMYQLFSKDEDALLNTWKISQRCNVSFDFNVIHLPEFQVPHHYTKEQIFDELCERGLQERYFDITPPIRERFEYEKKVIKKMGYVEYFLIVQDFIRFSKKNNIMVGPGRGSAAGSIISYCLQITDVDPIKYHLLFERFLNPERISMPDIDIDFCYEKREQVIDYVKEKYGEDHVAQIITFGTFGAKAAIRDVGRVLGISYAEVDKIAKQIPDNLGMTIEKALEMNSELKKMYVSDNNVRNIIDFAKRIEGLPRHASTHAAGVVISKNTMDYYVPLYMHKDLIATQFPMTTLEELGLLKMDFLGLRTLTVIQKTLEAIEKIYNKKIDFSKMDTNNTRVFQLLSNGNTLGVFQLESPGMRSFLKELRPDTFEDIVAGISLYRPGPMESIPIYIENKNNSNHISYLHESLKPILEVTKGIMVYQEQVMQIVRSLAGYSYARADLVRKAMSKKKMDVMEEEREYFVYGKISGSGDIEISGCVRNGIPEKIANQIYDEMIDFAKYAFNKSHAVCYAMLAYETAYLKAFYPSCFMASLMTSVSDRSDKVIEYIRECADLNICILKPDINRSNSYFSVEGDHIRYALASIKNIGIKAIDDIVQERNKNGEFQSFEDFIKRIPQKNISKRFVESLIKAGCFDSIHPNRASLVAGYEKVMDIVHSQKKHSIQGQVTLFSNQEALPNQNLNFFPHISDFSIKEKLYMEKETIGLYLSGHPLDEYQDVIKDDTNIVSIDSIKNIPSHQKSEIEKKKIVIVGTILSKMIKYTKQNKIMCFLTIEDFSGSLEVLIFPNVFQKNLEFLNEDECILIYGSMQWKEENDVTFIADRIEPLKTRKFKKIYIQLTQENSYRLNEIQTFIKKYPGKDHVIFFDSDSRKAFEMQGFHRIEYGSDIIDKLKIIAGKDNVKTKM
SIO_010081: HMPREF0389_RS01235
subclass of: SO_0000673
so part of: HMPREF0389_RS01235
location: complement(288168..291623)
location: region:288168-291623:-1
so has part: feature:288168-291623:-1:exon

WP_014261923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288168-291623:-1:exon

HMPREF0389_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01240
old locus tag: HMPREF0389_00384
so part of: sequence
location: complement(291666..293105)
location: region:291666-293105:-1
so has part: feature:291666-293105:-1:exon
subclass of: SO_0000010

position:291666:-1
position: 291666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293105:-1
position: 293105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291666-293105:-1:exon

HMPREF0389_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01240
old locus tag: HMPREF0389_00384
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013360464.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MKKWIQKLNFNLDFNNISIRMRILLSFNITIVLTIIVIQIIFSIFVKSYYYSGVEQLLKDKANFNSNFINIYAPSKDIHEKSKLLIKNMTDLEREKYFVQVIDHSYNVVMDLDDFSSISKITSVDVKDAMDGRVGVSIEKTENTDEKVMSVSMPLRKYNTVIGVLRYTTSLQEIDRAIKRYYTQSSIVGMCVLTLFLLISLVISKSITIPIRKLNMAADEMAKGDFDVRAEKIYDDEIGQLADTLNYLASEITKSEKIKKDFISSISHELRTPLTSIKGWGETLLLDAEENDDLNMGLSIICAEAERLGNIVEELLDFSRLESNAMKVFKDWVSPKKILQEVYNQFLPRKGSLEFKCELKGKDSLIYADKNRLKQIFINLIANSMKFTPHGSIFVSAEGFDDRVVFEICDTGIGIAKTDLEKVRERFYKVNINAPGSGMGLSIVEEILKLHDATMEIYSEVGEGTTVKIIFPIKNASYS
SIO_010081: HMPREF0389_RS01240
subclass of: SO_0000673
so part of: HMPREF0389_RS01240
location: complement(291666..293105)
location: region:291666-293105:-1
so has part: feature:291666-293105:-1:exon

WP_014261924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291666-293105:-1:exon

HMPREF0389_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01245
old locus tag: HMPREF0389_00383
so part of: sequence
location: complement(293107..293790)
location: region:293107-293790:-1
so has part: feature:293107-293790:-1:exon
subclass of: SO_0000010

position:293107:-1
position: 293107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293790:-1
position: 293790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293107-293790:-1:exon

HMPREF0389_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01245
old locus tag: HMPREF0389_00383
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015394958.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MKMLILEDEMSIRSFVTLNFKREGFDVLESDTGLSAIKIFDENPDIQLAILDVMIPDIDGFEVLKYIRSKSKNVGIIMLTARTHEQDKVMGLEYGADDYIGKPFSPAELIARVRSLIRRLSIKDENVNVIVSGRFKLDVANRKFFRDETEIELTPKEFEMLQLFLTNRHKSLSRDYILNQIWGDNYFGDLKVVDVNIRRIRKKIEEDAANPTYLKTIWGYGYRWEDE
SIO_010081: HMPREF0389_RS01245
subclass of: SO_0000673
so part of: HMPREF0389_RS01245
location: complement(293107..293790)
location: region:293107-293790:-1
so has part: feature:293107-293790:-1:exon

WP_014261925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293107-293790:-1:exon

HMPREF0389_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01250
old locus tag: HMPREF0389_00382
so part of: sequence
location: complement(293802..295166)
location: region:293802-295166:-1
so has part: feature:293802-295166:-1:exon
subclass of: SO_0000010

position:293802:-1
position: 293802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295166:-1
position: 295166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293802-295166:-1:exon

HMPREF0389_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01250
old locus tag: HMPREF0389_00382
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKISMKIRFLLIMTVSLFMMTSCVKIYTPEELIKAPELNIENKEIKDALAQMLPQDAVLYSTSNFNKLKTNTLSQGKSFFLQDFDNDGTEEVVALYKNSKMQTFGVIILKKYSGIWIKAQEIKINSIEILDFDIVDIDDDGLNEIIIGYIDGNEKRILSVFHQERLGLNEIFKSEYYSFTFSNIGEQNKLFLLISNFGSEPLTNKVKLFQFTENSFRKVDELIYPKGYNPYNVQVGKIDQEHFGIFVDLFVYESYGQSDVLMLQEGKLKSISSDSNNISTTQDTPIACSDIDGDGIIEVPQTSSIMLPNEGLSHRKDLFVRNYYKIISLSQLKLVAQVYEDTVDMKIRINFPFEFFNKVLISKDPYSNKLTLYYCPEETAYEAEGYPFLEILSLDVGYKNRYKDYIFVHEDENTIIVARPIDESDKVPKRFLREYEGILNLSEFPDVFLKRAE
SIO_010081: HMPREF0389_RS01250
subclass of: SO_0000673
so part of: HMPREF0389_RS01250
location: complement(293802..295166)
location: region:293802-295166:-1
so has part: feature:293802-295166:-1:exon

WP_014261926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293802-295166:-1:exon

HMPREF0389_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01255
old locus tag: HMPREF0389_00381
so part of: sequence
location: complement(295875..297020)
location: region:295875-297020:-1
so has part: feature:295875-297020:-1:exon
subclass of: SO_0000010

position:295875:-1
position: 295875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297020:-1
position: 297020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295875-297020:-1:exon

HMPREF0389_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01255
old locus tag: HMPREF0389_00381
EC number: 3.6.4.-
inference: COORDINATES: protein motif:HMM:NF012492.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MKFKEFNLRKEHILALQDMYIENPTDIQSKVIPKMRKGNDILAHAQTGTGKTLAFLIPILESIPDISSGIKSLIIVPTRELSNQITDVLKYFQKYRSLSVVNASGGHNITTQIQKLSSNTDIVVGTPGRVLDLLRNGNINFKNIDSFVIDEMDQILAFGFLEDVILLMNKTPRKKQVCMFSATVSQDVKKLSKQFMLNPIYLTAERGEVVLDNISQLIVQTKDSRKLSSLMYSIEKINPFMCMIFCNSKKNAEKLYSDFIHHQYKNMELLHGEMSQNKRENILKKFRELKVQYLITTDLSARGMNIEGVSHVINYDIPRDVEYYIHRIGRTGRMNQIGYAISFVTEKDIANMKKIQKRIKKTIPVVYDTNDKEREKMEYSF
SIO_010081: HMPREF0389_RS01255
subclass of: SO_0000673
so part of: HMPREF0389_RS01255
location: complement(295875..297020)
location: region:295875-297020:-1
so has part: feature:295875-297020:-1:exon

WP_014261927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295875-297020:-1:exon

HMPREF0389_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01260
old locus tag: HMPREF0389_00380
so part of: sequence
location: complement(297057..298694)
location: region:297057-298694:-1
so has part: feature:297057-298694:-1:exon
subclass of: SO_0000010

position:297057:-1
position: 297057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298694:-1
position: 298694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297057-298694:-1:exon

HMPREF0389_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01260
old locus tag: HMPREF0389_00380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013809928.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRIQNIKLSLEEQKDNTIPIETIKKKICQKLKCNLNEIMDIKIFKKSIDARKKQNIQFVYTADVSFLTPDIETHLMNKYGKKGISPTPDMSYEEVSSGNQILTNRPVIVGSGPSGLFATLLLSKRGYSPILIERGDEVDNRIEKIDAFWKSGILDTNSNVQFGEGGAGTFSDGKLTTLINDKRCRHILQLFIECGAPQDILYNSKPHIGTDILRKVVKNIRSKIIEYGGEVRFLSQLTDIVLNEHNELHSIVLNENEEILCDVMLLGIGHSARDTFEMLFHHGINMIPKSFSIGVRIEHPQKLVNIAQYGDSYNSLVFGSADYKLVYHSTSGRSAYTFCMCPGGYVVAAASEENMLVTNGMSEYNRDADNANSALLVGVTPDDFGGPSPLDAIEFQRRWESRAFELGGNNYSAPIQRVGDFLGVDMKHDDMTIIPSYKPGVKFADLKNCLPDYVIDTMKEALISFDKKLKGFANPNAILTGIETRSSSPVRILRNLDHMSNIKGIYPMGEGAGYAGGIMSSAVDGLKTAEKIIGQYVPLKNSNI
SIO_010081: HMPREF0389_RS01260
subclass of: SO_0000673
so part of: HMPREF0389_RS01260
location: complement(297057..298694)
location: region:297057-298694:-1
so has part: feature:297057-298694:-1:exon

WP_014261928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297057-298694:-1:exon

HMPREF0389_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01265
old locus tag: HMPREF0389_00379
so part of: sequence
location: complement(298719..299957)
location: region:298719-299957:-1
so has part: feature:298719-299957:-1:exon
subclass of: SO_0000010

position:298719:-1
position: 298719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299957:-1
position: 299957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298719-299957:-1:exon

HMPREF0389_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01265
old locus tag: HMPREF0389_00379
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015359341.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MKKQKHVVVIGGGASGIVAAISAKRNGADVTLLERNSRVGKKILATGNGRCNLTNINSDINFYNGQNPKFIYSTFGQFGIQETLSFFEKLGIEYKVEANGKVFPMSDQSSSVLDVLLYELNHLGVTIITDCYVTELKKNKRTFLVKSSDNKTFLCDSVVFATGGKSMPSSGSDGSGYELIKKLNHTIVPVFPSLVQLILQCDFLKRIDGVKFVGRADLIVNKKSCSTDRGDILFTSYGISGPPILQLSRKAGEFLQNNKECYIRLSILDTMTEDEIQKRLERRFEDNSYKTIFESMIGLVNKRLIPVILLEANISNQNRLASTLTKLEKKQIASLLKKWDFQIIGTKDWNNSQATAGGVNTNEVYSDTLESKKVEGLFFSGEVLDIDGQCGGFNLQWAWSSGMLAGRNAATL
SIO_010081: HMPREF0389_RS01265
subclass of: SO_0000673
so part of: HMPREF0389_RS01265
location: complement(298719..299957)
location: region:298719-299957:-1
so has part: feature:298719-299957:-1:exon

WP_014261929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298719-299957:-1:exon

HMPREF0389_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01270
old locus tag: HMPREF0389_00378
so part of: sequence
location: complement(300249..301490)
location: region:300249-301490:-1
so has part: feature:300249-301490:-1:exon
subclass of: SO_0000010

position:300249:-1
position: 300249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301490:-1
position: 301490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300249-301490:-1:exon

HMPREF0389_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01270
old locus tag: HMPREF0389_00378
inference: COORDINATES: protein motif:HMM:NF019310.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MIRTKLLSNKDGIITWCAIVMVIMVMFIQRQYIAVMSDFLMAKYQINISKATRLVNATLYGYAVMQIPMGMLLDYFGVRRVLIISWLVVCISTLVMTVTSCYGTALSMRFFIGVGMASSITSIMKVQTIWFDEHYFSHLSAGMALISNVGNLVATVPLSYLISKIGGQNTMWVISFITMVSVLLLFSFVKDKKEEIPEEINIKTSLSEVLCNRKSWSPIIIMFTFISTSTSLFGFWGIRFFSETYRLSVVDASKYMAFLSLGFMLGAPLVSIMDKIFDRNNKLNLNIFSGIYLLMWIYIMLNRGKPPLYIMPFLFVMMGMVLMFHLLPFTVIKKVNKVKNAGIATATVNSMEFFGSSILNFLIGLIVLRGVSVKNAMTVYLISALVCFISTFFINENFDNSADSVMKVDIFES
SIO_010081: HMPREF0389_RS01270
subclass of: SO_0000673
so part of: HMPREF0389_RS01270
location: complement(300249..301490)
location: region:300249-301490:-1
so has part: feature:300249-301490:-1:exon

WP_041250742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300249-301490:-1:exon

HMPREF0389_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01275
old locus tag: HMPREF0389_00377
so part of: sequence
location: complement(301593..302036)
location: region:301593-302036:-1
so has part: feature:301593-302036:-1:exon
subclass of: SO_0000010

position:301593:-1
position: 301593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302036:-1
position: 302036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301593-302036:-1:exon

HMPREF0389_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01275
old locus tag: HMPREF0389_00377
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003430905.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GatB/YqeY domain-containing protein
translation: MTLKDRLTDDLKEAMKNKEQVRKSVVTLIRAGIKQCEVDTRQELTDEDIISLISKQLKQRKDALVDFEKANRTDLIEQTNQEIAILENYLPEQLDDVELKEIITKVVEEVGATSMKDMGKVMAKTISLVQGRADGKRINAMVKQILG
SIO_010081: HMPREF0389_RS01275
subclass of: SO_0000673
so part of: HMPREF0389_RS01275
location: complement(301593..302036)
location: region:301593-302036:-1
so has part: feature:301593-302036:-1:exon

WP_014261931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301593-302036:-1:exon

HMPREF0389_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rpsU
locus tag: HMPREF0389_RS01280
old locus tag: HMPREF0389_00376
so part of: sequence
location: complement(302061..302237)
location: region:302061-302237:-1
so has part: feature:302061-302237:-1:exon
subclass of: SO_0000010

position:302061:-1
position: 302061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302237:-1
position: 302237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302061-302237:-1:exon

HMPREF0389_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rpsU
locus tag: HMPREF0389_RS01280
old locus tag: HMPREF0389_00376
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005367905.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S21
translation: MATEIKVKENESLDSALRRFKRQCALSGVMQEVRKREHYDKPSVKRKKKAEAARKKKR
SIO_010081: HMPREF0389_RS01280
subclass of: SO_0000673
so part of: HMPREF0389_RS01280
location: complement(302061..302237)
location: region:302061-302237:-1
so has part: feature:302061-302237:-1:exon

WP_014261932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302061-302237:-1:exon

HMPREF0389_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01285
old locus tag: HMPREF0389_00375
so part of: sequence
location: complement(302382..303464)
location: region:302382-303464:-1
so has part: feature:302382-303464:-1:exon
subclass of: SO_0000010

position:302382:-1
position: 302382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303464:-1
position: 303464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302382-303464:-1:exon

HMPREF0389_RS01285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01285
old locus tag: HMPREF0389_00375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262305.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MEYNNTTANSRKNKHLNDFERGQIQLLHNKGYSAYKIAKELRRASNTIRNELKRGTVTQIKGIHDVQVYYPDTGKLVYEKNRKNCKKKFKALKCSKYLDFVKQKFNEEKWSLDAICGYAKLNKLYEGQRVCTKTLYNYVDIGLIGIKSIDLPLRVKRKPAKKRVKENKRKLGKSIEERPQEIETRKTFGNWEIDTVIPKKNKEEASLITITERKSRMELILKLNRRKASIVNETLKNTLNRLKEPQKIFRSITSDNGLEFAKLCELEKTYIGNIYYCHPNNPQERGTNEKHNSLIRRFLPKGKSLNDYEEEHYIKIMNWMNNLPRKILNYRTPIEVFIEELNNLGLLDDNEELVQFDIAI
SIO_010081: HMPREF0389_RS01285
subclass of: SO_0000673
so part of: HMPREF0389_RS01285
location: complement(302382..303464)
location: region:302382-303464:-1
so has part: feature:302382-303464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:302382-303464:-1:exon

HMPREF0389_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01290
old locus tag: HMPREF0389_00374
so part of: sequence
location: complement(303597..304094)
location: region:303597-304094:-1
so has part: feature:303597-304094:-1:exon
subclass of: SO_0000010

position:303597:-1
position: 303597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304094:-1
position: 304094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303597-304094:-1:exon

HMPREF0389_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01290
old locus tag: HMPREF0389_00374
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012158120.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SEC-C metal-binding domain-containing protein
translation: MELFKNWQKMAYEPKNQQEYELFWNEYLPKEAEIYKYLLENKEETVTGTVSELAKKFNIDDVTFVGFIDGVNTSLNTELDVNNLTSDSKISLDLNFEKLYFNMLDAKADWLYNLEQWNDILTEEQKKTIKKEYDKTKTVVKEVKIGRNDPCVCGSGKKYKKCCGK
SIO_010081: HMPREF0389_RS01290
subclass of: SO_0000673
so part of: HMPREF0389_RS01290
location: complement(303597..304094)
location: region:303597-304094:-1
so has part: feature:303597-304094:-1:exon

WP_014261933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303597-304094:-1:exon

HMPREF0389_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rpoD
locus tag: HMPREF0389_RS01295
old locus tag: HMPREF0389_00373
so part of: sequence
location: complement(304305..305423)
location: region:304305-305423:-1
so has part: feature:304305-305423:-1:exon
subclass of: SO_0000010

position:304305:-1
position: 304305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305423:-1
position: 305423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304305-305423:-1:exon

HMPREF0389_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rpoD
locus tag: HMPREF0389_RS01295
old locus tag: HMPREF0389_00373
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003429425.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoD
translation: MIKEESKEKMKELLEKGKNKGTLTYMELAEILNPIAVNKDDIENIYETLNQLGIEIIDENTPKTHVNLDDIEEPEFTDEKDLEETKVEEDLSVPKGISVDDPVRMYLKEIGKISLLSAEEEIELAQKMDQGSELAKKKLVEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQELGREPRPEEISKVMDMSVEKIREIQKISQEPVSLETPIGEEEDSHLGDFIPDDDALAPSEAAAYSLLKEQLEEVLSTLNEREQKVLKLRFGLEDGRTRTLEEVGKEFDVTRERIRQIEAKALRKLRHPSRSKKLKDYLE
SIO_010081: HMPREF0389_RS01295
subclass of: SO_0000673
so part of: HMPREF0389_RS01295
location: complement(304305..305423)
location: region:304305-305423:-1
so has part: feature:304305-305423:-1:exon

WP_014261934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304305-305423:-1:exon

HMPREF0389_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: dnaG
locus tag: HMPREF0389_RS01300
old locus tag: HMPREF0389_00372
so part of: sequence
location: complement(305454..307184)
location: region:305454-307184:-1
so has part: feature:305454-307184:-1:exon
subclass of: SO_0000010

position:305454:-1
position: 305454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307184:-1
position: 307184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305454-307184:-1:exon

HMPREF0389_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: dnaG
locus tag: HMPREF0389_RS01300
old locus tag: HMPREF0389_00372
inference: COORDINATES: protein motif:HMM:TIGR01391.1
GO function: GO:0003896 - DNA primase activity [Evidence IEA]
GO process: GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA primase
translation: MNFDNSFIEKIKDENDIVDVVSEYVSLKGTHGNWMGLCPFHNEKTPSFSVNQNGQFYKCFGCQKSGDVISFIQEKERLEFVDAVIFLANRAMIPLPEKKEYSVEEKKVQEEKDILMRINLEAARFFRECLWKNLFALEYLEKRDLNREIILHFGLGYAPFNNDLYEKLEKFYTEDDLLKSGIFLKRDNGEITCRFKNRVMFPIFNPKGKVIAFGGRALNDSYPPKYLNSPETIIFFKKNNLYSLNFARKSIYQKDVILVEGYMDTITLHRYGFSNTVASLGTAFTEQQAELLKKNKVKNVYLCYDSDNAGRLAAKRAMDILYKQELEGKVVILDAEKDPDDYLKKYGPQKFEQCLTNALNIIDFELYLLSNDVDLEKENDKLLFVKNAVSVLKKYEEKIPNSFVLIEQALKKISFSTGISIKSLGQEMYGKYFSPNQFHNHSIEKEHVEKIEIDFHDYDKEKMLIDSIYHYGIDEYITKFSIKESDFFSEENRSLFRQLLAQKKDCFEDSFSRDGICKIEDMPTLIYSIRQDNIRRSIDILKKRQRELMQSGQCKDELIRIGIDIISLQKELKNIK
SIO_010081: HMPREF0389_RS01300
subclass of: SO_0000673
so part of: HMPREF0389_RS01300
location: complement(305454..307184)
location: region:305454-307184:-1
so has part: feature:305454-307184:-1:exon

WP_014261935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305454-307184:-1:exon

HMPREF0389_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01305
old locus tag: HMPREF0389_00371
so part of: sequence
location: complement(307306..307740)
location: region:307306-307740:-1
so has part: feature:307306-307740:-1:exon
subclass of: SO_0000010

position:307306:-1
position: 307306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307740:-1
position: 307740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307306-307740:-1:exon

HMPREF0389_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01305
old locus tag: HMPREF0389_00371
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004446797.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ACT domain-containing protein
translation: MRKFLVIDTSALPDIYEKVLYAKELLRMKEVKGINEAVRLAGISRSTFYKYKDYVFSLSESTLTKKATIHFMLKHEKGILASILQILADSKANILTINQNIPIHNTADLSITFDMKNMDIQIEEILEEISALDGVVNVEIIALE
SIO_010081: HMPREF0389_RS01305
subclass of: SO_0000673
so part of: HMPREF0389_RS01305
location: complement(307306..307740)
location: region:307306-307740:-1
so has part: feature:307306-307740:-1:exon

WP_014261936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307306-307740:-1:exon

HMPREF0389_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01310
old locus tag: HMPREF0389_00370
so part of: sequence
location: complement(307792..308655)
location: region:307792-308655:-1
so has part: feature:307792-308655:-1:exon
subclass of: SO_0000010

position:307792:-1
position: 307792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308655:-1
position: 308655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307792-308655:-1:exon

HMPREF0389_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01310
old locus tag: HMPREF0389_00370
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009528254.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MLIVADNWKDYEILDANSGEKLERWGDIVLRRPDPQIIWNKSIDEYLWNSAHARYLRNNKGGGYWKFYKDIPDSWEIKYGNLKFSIHPTGFKHTGLFPEQAVNWDWISKKIKSSTKDVKVLNLFAYTGGASCAASNAGASEVVHVDAAKGMVRWAKENSILSGLENNKFRFLTDDVFKFIEKEIRRGNKYDAIIMDPPSYGRGPKGEIWKIENKFNELLQRIKKILTDDFLFVLINCYTTGFSNIALENIVKIEFSDMNRNIYSGQTLLPITSGDLYLPCGIYCRVE
SIO_010081: HMPREF0389_RS01310
subclass of: SO_0000673
so part of: HMPREF0389_RS01310
location: complement(307792..308655)
location: region:307792-308655:-1
so has part: feature:307792-308655:-1:exon

WP_041250924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307792-308655:-1:exon

HMPREF0389_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01315
old locus tag: HMPREF0389_00369
so part of: sequence
location: complement(308669..310021)
location: region:308669-310021:-1
so has part: feature:308669-310021:-1:exon
subclass of: SO_0000010

position:308669:-1
position: 308669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310021:-1
position: 310021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308669-310021:-1:exon

HMPREF0389_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01315
old locus tag: HMPREF0389_00369
inference: COORDINATES: protein motif:HMM:NF021653.2
GO function: GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease E/G
translation: MKKKLIIEDSSFLTKVAYLNQGTVERIEIIKKDYHIKKNQIYQCRVKKNIVSSSGKLVDLGNQELGFLQVNKDLKNGDVVIAQIKKEPISSKLAKLTDDINLSGEYVIYLPYGKEIFLSNKIKNDTRSDKLVKKLSTDFLNIGLIVRTEAIEVDYEQVRDEVERLVDLFNEIMKKKKEGVIGLLYEQDSLSDFFHHFRFDTIDEIISNSQEIISKVKDWARSKKMRPEYIFQEIDLFGSCGISLTKLFSKKYEFGNISIIIEPTEAFTAVDVNSGYQERHCYMDDMALEVNLKSCKYVVDLIIKKNISGIILIDFIDMKKHGYQEKLLRRLREEFRRDIKKVSVLNITSLGIVQVIRQREKENIMDMISFSCPLCSGSGYLKSPLILLDELEVELRKYLYHRELKKGNILVLAPGYMKSYFDKNQSFLESKYGVSMNIKYEDYMNGVKLL
SIO_010081: HMPREF0389_RS01315
subclass of: SO_0000673
so part of: HMPREF0389_RS01315
location: complement(308669..310021)
location: region:308669-310021:-1
so has part: feature:308669-310021:-1:exon

WP_014261938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308669-310021:-1:exon

HMPREF0389_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: glmM
locus tag: HMPREF0389_RS01320
old locus tag: HMPREF0389_00368
so part of: sequence
location: complement(310130..311476)
location: region:310130-311476:-1
so has part: feature:310130-311476:-1:exon
subclass of: SO_0000010

position:310130:-1
position: 310130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311476:-1
position: 311476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310130-311476:-1:exon

HMPREF0389_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: glmM
locus tag: HMPREF0389_RS01320
old locus tag: HMPREF0389_00368
EC number: 5.4.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011860638.1
GO function: GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglucosamine mutase
translation: MRKYFGTDGIRGVVGKELTAEIGYRVGAAGAYVFKKNGHCTDENIKVIIGTDTRISKDLLSSAISAGAMSVGANVIDVGIIPTPGVAYLIRKYNADIGIVISASHNPSEYNGIKIFNSNGFKLADEIEEEIEYFIDFPYKIDSIGLGVKLGGITPEEDYITFLTNCIQGNLEGLKLTMDCSNGAAYHIAPEVYSRLGAEVNVIHNSPDGYNINQNCGSTHLEHLQQEVLKNGSDMGIAYDGDADRFLAVDNKGNIVDGDQILLISAAYLKERNRLKNNTLVVTVMSNLGLKLAAKNLGIDLAITNVGDRYVLEKMLKDDYSVGGEQSGHMIFKEFNTTGDGILSSLILCEILKHTGKDLFSLSKIMTVYPQVLYNAKVKAENKAKYLDDDEIQNKIKLIEEKFNGEGRVLIRPSGTEPLIRVMIEGKDYKEIETEAKRLSVFIEDRLS
SIO_010081: HMPREF0389_RS01320
subclass of: SO_0000673
so part of: HMPREF0389_RS01320
location: complement(310130..311476)
location: region:310130-311476:-1
so has part: feature:310130-311476:-1:exon

WP_014261939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310130-311476:-1:exon

HMPREF0389_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01325
old locus tag: HMPREF0389_00367
so part of: sequence
location: complement(311536..312732)
location: region:311536-312732:-1
so has part: feature:311536-312732:-1:exon
subclass of: SO_0000010

position:311536:-1
position: 311536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312732:-1
position: 312732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311536-312732:-1:exon

HMPREF0389_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01325
old locus tag: HMPREF0389_00367
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNFYKKNAKVKLIVLFSSFILWIYVMGVVDPIITRDITINDISFIYENSNNNMEFVPIDDVQTVRIQMKGKSSDITNQISNGIGVTGIISNPKIGENTVMLKTELPAKIHYEFIPKEFVVKLDTIAVQSRTIEIDVIDESTTAERVYSIENNITSTYVEGASSELKKVEKIIATVKLDNRKENFSEKLELYAVDKNGKRMNTVHLSDKYVFVKVSFNYSKEVDVVPNIVSYNGEKLRLSAYSTEPNTILLTGDTKSLDMLTEVYTKQIPCNNILACIGNQIELNNVDGLSMEPSSVKITRIDENILQKEIKYDVSEIIFKNFSSEEIEKVKNILKESIIATVLYSKELDSEIDKSNVTIVLDKNNTDNVTKKVSFQLVTRLPIDSYKVNVNEIFLGN
SIO_010081: HMPREF0389_RS01325
subclass of: SO_0000673
so part of: HMPREF0389_RS01325
location: complement(311536..312732)
location: region:311536-312732:-1
so has part: feature:311536-312732:-1:exon

WP_156775224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311536-312732:-1:exon

HMPREF0389_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: cdaA
locus tag: HMPREF0389_RS01330
old locus tag: HMPREF0389_00366
so part of: sequence
location: complement(312732..313562)
location: region:312732-313562:-1
so has part: feature:312732-313562:-1:exon
subclass of: SO_0000010

position:313562:-1
position: 313562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312732-313562:-1:exon

HMPREF0389_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: cdaA
locus tag: HMPREF0389_RS01330
old locus tag: HMPREF0389_00366
EC number: 2.7.7.85
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006438921.1
GO function: GO:0004016 - adenylate cyclase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diadenylate cyclase CdaA
translation: MELIFLWEIKDVLINMQLKDIVDILIVSYIFYNLYLLIKETRAEQLMKGILVLLAITRIAEVLELQLLSWLLTHTIQAGMFALLIVFQPELRRILEYLGQTKFLSTSITNSYTNNDNFILELVEGMMSLSRQKIGALIILERKTGINEIIQTGTKIDGELTRQLLINIFIPNTPLHDGAVVVRKNKIAAAGCFLPLTENKFLNQELGTRHRAALGISERSDCISLVVSEETGHISIAQNGKLYKDLKEDTLKSLLKKGLEEEQPKYSFLKKRGEQK
SIO_010081: HMPREF0389_RS01330
subclass of: SO_0000673
so part of: HMPREF0389_RS01330
location: complement(312732..313562)
location: region:312732-313562:-1
so has part: feature:312732-313562:-1:exon

WP_014261941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312732-313562:-1:exon

HMPREF0389_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01335
old locus tag: HMPREF0389_00365
so part of: sequence
location: complement(313661..314185)
location: region:313661-314185:-1
so has part: feature:313661-314185:-1:exon
subclass of: SO_0000010

position:313661:-1
position: 313661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314185:-1
position: 314185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313661-314185:-1:exon

HMPREF0389_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01335
old locus tag: HMPREF0389_00365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011722936.1
GO function: GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO process: GO:0015703 - chromate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromate transporter
translation: MLFILFFTFFKIGLFSFGGGYAMLSMIYHEVVENSNWITPSEFTDILAISQITPGPISINSATYIGILNHKGILGAVSATFGVVLPSFITTIILCKFIIKFKDNIYMESVFTFLRPIVVGFIFASSIMLMNRNNFVDWKSGIIFLVSCLLSYYKKINPIFIIICSAVIGILFRG
SIO_010081: HMPREF0389_RS01335
subclass of: SO_0000673
so part of: HMPREF0389_RS01335
location: complement(313661..314185)
location: region:313661-314185:-1
so has part: feature:313661-314185:-1:exon

WP_014261942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313661-314185:-1:exon

HMPREF0389_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01340
old locus tag: HMPREF0389_00364
so part of: sequence
location: complement(314191..314739)
location: region:314191-314739:-1
so has part: feature:314191-314739:-1:exon
subclass of: SO_0000010

position:314191:-1
position: 314191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314739:-1
position: 314739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314191-314739:-1:exon

HMPREF0389_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01340
old locus tag: HMPREF0389_00364
inference: COORDINATES: protein motif:HMM:NF014471.2
GO function: GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO process: GO:0015703 - chromate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromate transporter
translation: MKDLKLYLEIFFSFFKIGMATIGGGYAMIPIIQDEIVNRKRWILEEEFIDILSVAQTTPGPIAVNTSVFVGYQTSGMIGAIMAVLGCVLPSFCIISIIATFFVKIKDNIYVNSAMMGVKPAVVALIFSSAIKIYQTSKLQYSTIPFIVIVIFLICVLKITPILLILFGILAGLVSCRKSEGK
SIO_010081: HMPREF0389_RS01340
subclass of: SO_0000673
so part of: HMPREF0389_RS01340
location: complement(314191..314739)
location: region:314191-314739:-1
so has part: feature:314191-314739:-1:exon

WP_207635082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314191-314739:-1:exon

HMPREF0389_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01345
old locus tag: HMPREF0389_00363
so part of: sequence
location: complement(314761..315882)
location: region:314761-315882:-1
so has part: feature:314761-315882:-1:exon
subclass of: SO_0000010

position:314761:-1
position: 314761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315882:-1
position: 315882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314761-315882:-1:exon

HMPREF0389_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01345
old locus tag: HMPREF0389_00363
inference: COORDINATES: protein motif:HMM:NF024579.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSCIDIHLRKNIEKLRFLELPKEYFRDCDDFIYDNEIQVPIFTDYLEEMILKKKEGISIGEALKSMGYVMGIDKDFKYNNLYFKIIQKYISNPTAFFSSYANTEYNKGEYRNAIIILSCIIHFYSTELDVLFNYANLCKGMIDRTNNPEEKENFYYESKRVFKLIVKHNPRFAMAQYQLGFFFLNDNCLEDAKNSFEIAKKYISEDNMDILEDIDIQINNIKNINSLSIIEKLIEEGNIDLAIRDLYKFHPFRNEEKYKRFFLLGYGYRIKGEYKKAIEHYSHAFDLCNTEVELISELALCFAMMNDFEQAEELYLAALDLSPDSAVLLCNLSMVYMNMNELGLSEKYIKQALDLDDKDEIALSVWRALKKLI
SIO_010081: HMPREF0389_RS01345
subclass of: SO_0000673
so part of: HMPREF0389_RS01345
location: complement(314761..315882)
location: region:314761-315882:-1
so has part: feature:314761-315882:-1:exon

WP_014261944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314761-315882:-1:exon

HMPREF0389_RS09105
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS09105
old locus tag: HMPREF0389_00362
so part of: sequence
location: complement(315989..317335)
location: region:315989-317335:-1
so has part: feature:315989-317335:-1:exon
subclass of: SO_0000010

position:315989:-1
position: 315989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317335:-1
position: 317335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315989-317335:-1:exon

HMPREF0389_RS09105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS09105
old locus tag: HMPREF0389_00362
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018592254.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SH3 domain-containing C40 family peptidase
translation: MLYRRILSIMIPVIMCPMISFADYQAIVNIDTLNVRAKKDSTSTVLCEVSANARLDVSIEGDKWLKAKVKNKEGYLFQEYVDLYEVTSFGEATFKHNFPMKDTTMNFYKGEVVPVYDYFNGYYLVKKKHQYFYIHDSVVSVDKKSDIAKPTVIKNGMSTKLKSARLEKEEIVKIKQNEVKTEHTEEELISILDNNQTESYVLNYDSNIIKSAKPLEIAKSEDNIDLFDGYEIDIENVEQTKKIKNKKDNKKEEIVPKNTSDFDKLKYSKLVSDNGLDKFVNQSDLLSYAVEELGKPYVYGANGPSTFDCSGFTSYVFKKSGISIPRTSYLQAEKGESVDKNKLKSGDLVFFDTRSLSKLETEVDDPIDGAVVVQESIETVVSHDLEDTNFDKEKKKRVTIKPSKVTHVGIYIGDGKFIHASSGQKKVVINELDSKYYSERYYGAKRYR
SIO_010081: HMPREF0389_RS09105
subclass of: SO_0000673
so part of: HMPREF0389_RS09105
location: complement(315989..317335)
location: region:315989-317335:-1
so has part: feature:315989-317335:-1:exon

WP_049770192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315989-317335:-1:exon

HMPREF0389_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01355
old locus tag: HMPREF0389_00361
so part of: sequence
location: complement(317479..318222)
location: region:317479-318222:-1
so has part: feature:317479-318222:-1:exon
subclass of: SO_0000010

position:317479:-1
position: 317479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318222:-1
position: 318222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317479-318222:-1:exon

HMPREF0389_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01355
old locus tag: HMPREF0389_00361
EC number: 2.1.1.-
inference: COORDINATES: protein motif:HMM:TIGR00046.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RsmE family RNA methyltransferase
translation: MDRFYVDHPFKEHAFLDDIEEIKHITKVLRFSVGDYVEIFDSVQGEYIAKISAIDSKRIYFDIQKELPKSKSNIFVTLYQGIAKGHRMEFLIQKSTELGVDTIIPVRFQRSVAKLEKDDKKIQRWNKICLEASKQCKRNKISCVKNAIDFSELSSELLKNDLNLFFYEEEHNLTLKSYLKEQLNRIKVLQNGVSIGIIVGPEGGITEQEKDILVSEGIPSLSLGKRILRTETVSVAVLSMLHYELEL
SIO_010081: HMPREF0389_RS01355
subclass of: SO_0000673
so part of: HMPREF0389_RS01355
location: complement(317479..318222)
location: region:317479-318222:-1
so has part: feature:317479-318222:-1:exon

WP_014261946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317479-318222:-1:exon

HMPREF0389_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: prmA
locus tag: HMPREF0389_RS01360
old locus tag: HMPREF0389_00360
so part of: sequence
location: complement(318224..319165)
location: region:318224-319165:-1
so has part: feature:318224-319165:-1:exon
subclass of: SO_0000010

position:318224:-1
position: 318224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319165:-1
position: 319165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318224-319165:-1:exon

HMPREF0389_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: prmA
locus tag: HMPREF0389_RS01360
old locus tag: HMPREF0389_00360
inference: COORDINATES: protein motif:HMM:NF018076.2
GO function: GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L11 methyltransferase
translation: MKWTEVEIVTSNEAVDAICEILLEIGISGVSIQDPHDLKSFKEEFPFWDYIDEEVESGKKADVIIKAYVSESDNLSEILENLQFRILELKKFDLNIGKGKISTNSLKQEDWEESWKDYFQTFHATDKIVINPVWRHYTPTEGEIVIDMDPGMAFGTGEHETTSMCIELIEKNIKYQDNLLDIGCGSGILSIVAKKLGANIVEAIDLDPVAVKVAKENIEYNHLTGQIVVKEGNLLDESIGLYDIVVANIMADAIIMLIQSVRLFMNKDGMFIASGIISDKLSEVVFELKKHNFVITTLLQKGEWNAIVAKQGE
SIO_010081: HMPREF0389_RS01360
subclass of: SO_0000673
so part of: HMPREF0389_RS01360
location: complement(318224..319165)
location: region:318224-319165:-1
so has part: feature:318224-319165:-1:exon

WP_014261947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318224-319165:-1:exon

HMPREF0389_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01365
old locus tag: HMPREF0389_00359
so part of: sequence
location: complement(319210..319728)
location: region:319210-319728:-1
so has part: feature:319210-319728:-1:exon
subclass of: SO_0000010

position:319210:-1
position: 319210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319728:-1
position: 319728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319210-319728:-1:exon

HMPREF0389_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01365
old locus tag: HMPREF0389_00359
EC number: 5.2.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010073878.1
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO process: GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidylprolyl isomerase
translation: MPNPIVEMKIKNKGNIKIELYPEIAPNTVNNFISLIKKGYYDGLIFHRIIRGFMIQGGDPRGTGMGGPGYSIRGEFSANGFTNDLKHTEGVLSMARTMDPNSAGSQFFLMTSVSPHLDGQYAAFGKVIEGLNLIMDLEKVKTSFGDKPLEDVVMEMVTVNTFGVDFPEPERY
SIO_010081: HMPREF0389_RS01365
subclass of: SO_0000673
so part of: HMPREF0389_RS01365
location: complement(319210..319728)
location: region:319210-319728:-1
so has part: feature:319210-319728:-1:exon

WP_014261948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319210-319728:-1:exon

HMPREF0389_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01370
old locus tag: HMPREF0389_00358
so part of: sequence
location: complement(319941..320222)
location: region:319941-320222:-1
so has part: feature:319941-320222:-1:exon
subclass of: SO_0000010

position:319941:-1
position: 319941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320222:-1
position: 320222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319941-320222:-1:exon

HMPREF0389_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01370
old locus tag: HMPREF0389_00358
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007789649.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0030261 - chromosome condensation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MNKAELVTKMAEKCNLTKKDMEVALNAFMSCVEDALVAGEKVQLVGFGSFETRERAEREGRNPRSPEEVIKIPASKAPVFKAGKGLKEKVNHK
SIO_010081: HMPREF0389_RS01370
subclass of: SO_0000673
so part of: HMPREF0389_RS01370
location: complement(319941..320222)
location: region:319941-320222:-1
so has part: feature:319941-320222:-1:exon

WP_014261949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319941-320222:-1:exon

HMPREF0389_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01375
old locus tag: HMPREF0389_00357
so part of: sequence
location: complement(320564..321538)
location: region:320564-321538:-1
so has part: feature:320564-321538:-1:exon
subclass of: SO_0000010

position:320564:-1
position: 320564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321538:-1
position: 321538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320564-321538:-1:exon

HMPREF0389_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01375
old locus tag: HMPREF0389_00357
inference: COORDINATES: protein motif:HMM:NF012799.2
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SAM-dependent methyltransferase
translation: MSVTIIGLGPGNIDNLSLGAYRELVSGKKIYCRTKEHPVVDALLEQGIQFEFLDRFYSDYDKFETVYETICEFIVLCAEKQDLIYCVPGHPYVAETTVAMIEKELERKNIECRVIGSMSFVDAIYQYLKLDPVHGFCLLNAMDFDENKIDTGKSLILTQVYNSWIASEVKLKLMEIYGDEFEIWIVEGALIPNLEKKVKIPLYRLDQIKWKFNHLTSLYIPVQLEKLHYSFYDLVDLIRVAKSAYGYAWDKNRCYNTLEKYLSCKSNELNLSSDNKDIDNLIEELGDVLLLILLCAQNGRETGFFDIFDVIDLLYRNLTLKSIT
SIO_010081: HMPREF0389_RS01375
subclass of: SO_0000673
so part of: HMPREF0389_RS01375
location: complement(320564..321538)
location: region:320564-321538:-1
so has part: feature:320564-321538:-1:exon

WP_014261950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320564-321538:-1:exon

HMPREF0389_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: recA
locus tag: HMPREF0389_RS01380
old locus tag: HMPREF0389_00356
so part of: sequence
location: complement(321556..322692)
location: region:321556-322692:-1
so has part: feature:321556-322692:-1:exon
subclass of: SO_0000010

position:321556:-1
position: 321556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322692:-1
position: 322692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321556-322692:-1:exon

HMPREF0389_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: recA
locus tag: HMPREF0389_RS01380
old locus tag: HMPREF0389_00356
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013657466.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase RecA
translation: MKSSDKKSKNVDNVDRIGAERKKVLDATISKIERDFGKGAVMMLGDNIDMNIETISTGSLGLDLAIGVGGLPKGRIIEIYGPESSGKTTVALHAVAEAQKAGGLAAFIDAEHAMDPVYAKALGVDIDNLIISQPDNGEQALEIAESLVKSGVIDILVIDSVAALVPRSEIEGDMGDSHVGLQARLMSQALRKLTASTNRFKTVIIFINQLREKIGVMFGNPETTTGGRALKFYSTLRLDIRKFDTIKKNDVVVGNRTRVKVVKNKVAPPFRQAEFDIMYGEGISRAGEIVDIASQYGIIEKAGSWYSYNDMKIGQGRENVKQFLLDNQEMMEEIEGQVRRTLLKSHVSENDLIEDALSETKVNMDDFSDLDDTVDLNI
SIO_010081: HMPREF0389_RS01380
subclass of: SO_0000673
so part of: HMPREF0389_RS01380
location: complement(321556..322692)
location: region:321556-322692:-1
so has part: feature:321556-322692:-1:exon

WP_014261951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321556-322692:-1:exon

HMPREF0389_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: asnS
locus tag: HMPREF0389_RS01385
old locus tag: HMPREF0389_00355
so part of: sequence
location: complement(323006..324397)
location: region:323006-324397:-1
so has part: feature:323006-324397:-1:exon
subclass of: SO_0000010

position:323006:-1
position: 323006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324397:-1
position: 324397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323006-324397:-1:exon

HMPREF0389_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: asnS
locus tag: HMPREF0389_RS01385
old locus tag: HMPREF0389_00355
EC number: 6.1.1.22
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003512025.1
GO function: GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: asparagine--tRNA ligase
translation: MKSIDIRALFRNSKDYVGKEIVVEGWIRTNRSSKSFGFIELNDGTFFKNLQVVYEENLTDFKKISKLCIATAISVKGTLVETPGAKQPFEIKASEIIVEAESSPEFPLQKKRHTFEYLRTISHLRPRGNTYAAVFRVRSIAAYAIHKFFQERNFVYVNTPIITGSDAEGAGEMFHVTTFDFNNIPKNSDNSIDYTKDFFKKSTNLTVSGQLEGECYALAYKNIYTFGPTFRSENSNTARHAAEFWMIEPEIAFSDLNGYMDLAEEMIKFIIDYVLEHAPEEMEFFNSFIDKGLLDRLNHVASSDFKRITYTEAVELLQKSDKKFEYPIEWGSDLQTEHERYLTEEVFKKPLFVTDYPKDIKAFYMRINDDNKTVAAADLLVPGIGEIIGGSQREERLNVLSERMKDIGLNEDDYWWYMELRKYGGVKHAGYGLGFERMIMYLTGMSNIRDVIPFPRTVGTAEF
SIO_010081: HMPREF0389_RS01385
subclass of: SO_0000673
so part of: HMPREF0389_RS01385
location: complement(323006..324397)
location: region:323006-324397:-1
so has part: feature:323006-324397:-1:exon

WP_041250929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323006-324397:-1:exon

HMPREF0389_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01390
old locus tag: HMPREF0389_00354
so part of: sequence
location: complement(324416..324664)
location: region:324416-324664:-1
so has part: feature:324416-324664:-1:exon
subclass of: SO_0000010

position:324416:-1
position: 324416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324664:-1
position: 324664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324416-324664:-1:exon

HMPREF0389_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01390
old locus tag: HMPREF0389_00354
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004060894.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKKELLKVVLCGGVRKEDEKKVGVVSVVLITYDRDLAQEKMQELIVKHPENCYMVYTVPEDMDLTILAQYPSMAITKEDLE
SIO_010081: HMPREF0389_RS01390
subclass of: SO_0000673
so part of: HMPREF0389_RS01390
location: complement(324416..324664)
location: region:324416-324664:-1
so has part: feature:324416-324664:-1:exon

WP_014261953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324416-324664:-1:exon

HMPREF0389_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01395
old locus tag: HMPREF0389_00353
so part of: sequence
location: complement(324692..326011)
location: region:324692-326011:-1
so has part: feature:324692-326011:-1:exon
subclass of: SO_0000010

position:324692:-1
position: 324692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326011:-1
position: 326011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324692-326011:-1:exon

HMPREF0389_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01395
old locus tag: HMPREF0389_00353
EC number: 3.1.3.16
inference: COORDINATES: protein motif:HMM:NF018884.2
GO function: GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PP2C family protein-serine/threonine phosphatase
translation: MGLSEVRNHANLILNIIRLITKKENFYDVKNEVMESVRSVIPCEKISINMIPKENAKEVQLVYSYTNKSSFGEGIESNLDDIISLPRESYSDFIWNAVSEGIYSYTFSDEKNYQQRAVFPIITSQGIDGFIYFLFKKNFFLSRDNICFLEEIGLLLGISIERTELNKKILESKMRQREMAIAFDMQQNVMSENNLLFLNGGRINYLYKYGETMKYLPKLSKRLGGDYCEIIPFENRSALVFIADVMGHGASSNYFVPMMKGILKTCVSMGVVEPKNLMNQMNQLLMKELDKANLFITAQAVYINFEDNMLYITNAGHTEPILFSQNEDMFWYSYIGENKGLPLGIDSSVQYTQNQISADEYDMLLLYTDGILEATNIDGIEYGTDGIIDFCRKNKGKGYENFVERLYEDVLEYIRHTDTVLQDDTMLIGVELGTIQKDS
SIO_010081: HMPREF0389_RS01395
subclass of: SO_0000673
so part of: HMPREF0389_RS01395
location: complement(324692..326011)
location: region:324692-326011:-1
so has part: feature:324692-326011:-1:exon

WP_041250743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324692-326011:-1:exon

HMPREF0389_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01400
old locus tag: HMPREF0389_00352
so part of: sequence
location: complement(326035..326799)
location: region:326035-326799:-1
so has part: feature:326035-326799:-1:exon
subclass of: SO_0000010

position:326035:-1
position: 326035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326799:-1
position: 326799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326035-326799:-1:exon

HMPREF0389_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01400
old locus tag: HMPREF0389_00352
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002605667.1
GO function: GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TatD family hydrolase
translation: MGLFDSHVHLDDSRFDGDREELISSLSEDDIDYVVNIGADLQTSKNSIELSEKYSFVYATVGVHPHEVKSMTEDDIDLLRELSTHDKVVAIGEIGLDYYYDNSPRELQKKWFIRQIELANECNLPIVIHSRDAAQDTYDILEQHNRSSRLLIHCFSQSLEMAKKYVNMGAFIALGGAITFKNAKHLLDVAKFIPMEHLLLETDCPYLTPEPFRGKRNDPSKVRFVAQKIAELKNIDFTEVVDRTNYNARMFYGI
SIO_010081: HMPREF0389_RS01400
subclass of: SO_0000673
so part of: HMPREF0389_RS01400
location: complement(326035..326799)
location: region:326035-326799:-1
so has part: feature:326035-326799:-1:exon

WP_014261955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326035-326799:-1:exon

HMPREF0389_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: metG
locus tag: HMPREF0389_RS01405
old locus tag: HMPREF0389_00351
so part of: sequence
location: complement(326799..328727)
location: region:326799-328727:-1
so has part: feature:326799-328727:-1:exon
subclass of: SO_0000010

position:328727:-1
position: 328727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326799-328727:-1:exon

HMPREF0389_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: metG
locus tag: HMPREF0389_RS01405
old locus tag: HMPREF0389_00351
EC number: 6.1.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009894056.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
GO process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine--tRNA ligase
translation: MSKKTFYVTTPIYYPSGRLHIGHTYTTVAADAISRYKRFAGFDVRFLTGTDEHGEKIQKKAREMGLEPIIYLDNMISDIKKLWNVMEISYDDFIRTTESRHEERVQKIFQKLYDQGDIYLGEYEGHYCVECEAFWTESQLEDNKCPDCHREVESKKEQSYFFRLSKYQDRLIEYYEQHPDFCFPESRKNEMLNNFLKKGLEDLSVSRTSFDWGVKVPFDERHVIYVWIDALCNYITALGYPDNTKEMQAYWPANMQIVGKEIMRFHTIIWPALLMALDLPLPQKVYGHGWILFSDDKMSKSKGNVVYPEPIIERYGIDALKYFLLREFVFGQDGNYTNRGFLTRINSDLVNDLGNLLSRTVSMVEKYTDGIVMEYNASTEFDESLETIINELFEKFDEAMENMQFNEAFEELWKLVRRANKYIDETMPWKLAKDDTKQEELRSVLYHLIETLRVVAVFLRPMLTITSDKILEQINIPVEEATLDSVKVFGGYPFETKVKRGENLFPRLDIEKELQEMELLFVDKKEESTSTPHKDEITIEDFDKIELRVAKVLECEQHPKADKLLVFKLKVGSEERQIVSGIAKFYKPEDLIGKKLVVVLNLKPVKLRGVVSEGMILSAATEDDTSLVTISAEGIIDGVEVR
SIO_010081: HMPREF0389_RS01405
subclass of: SO_0000673
so part of: HMPREF0389_RS01405
location: complement(326799..328727)
location: region:326799-328727:-1
so has part: feature:326799-328727:-1:exon

WP_014261956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326799-328727:-1:exon

HMPREF0389_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01410
old locus tag: HMPREF0389_00350
so part of: sequence
location: complement(329309..330352)
location: region:329309-330352:-1
so has part: feature:329309-330352:-1:exon
subclass of: SO_0000010

position:329309:-1
position: 329309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330352:-1
position: 330352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329309-330352:-1:exon

HMPREF0389_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01410
old locus tag: HMPREF0389_00350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003440236.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS sugar transporter subunit IIC
translation: MKEKNDAKENFLKKKGIEMSFQRYGIDVLGSMAMGLFASLLIGTILNTIGTKLHIPFLSEVIWPIAKDMTGPAIAVAIAMALKAPNLVIFSSVIVGFAGNKFGGPVGAWIATWISVELGKIVSKETKVDIIVTPAVTIVTGVWLGTFLGPAINAVMIRLGNMIMVATTLRPFWMGMIVSVVVGIVLTLPISSAALCMMLSLAGLAGGAATAGCSAQMIGFAVISFKENGWSGLLAQGIGTSMLQVPNILKNWKIWIPPTMAAAITGPISTMVFRMENIPIGSGMGTSGFVGQIGTVTAMMESGNSSMKIYGGILLIHFILPTVLSLLFYKMLKSVGWIKDGDLKLDL
SIO_010081: HMPREF0389_RS01410
subclass of: SO_0000673
so part of: HMPREF0389_RS01410
location: complement(329309..330352)
location: region:329309-330352:-1
so has part: feature:329309-330352:-1:exon

WP_014261957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329309-330352:-1:exon

HMPREF0389_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01415
old locus tag: HMPREF0389_00349
so part of: sequence
location: 330671..331588
location: region:330671-331588:1
so has part: feature:330671-331588:1:exon
subclass of: SO_0000010

position:330671:1
position: 330671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331588:1
position: 331588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330671-331588:1:exon

HMPREF0389_RS01415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01415
old locus tag: HMPREF0389_00349
inference: COORDINATES: protein motif:HMM:NF039614.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arginine deiminase-related protein
translation: MKHSTSSIVMVRPVAFQFNAETAVNNVYQNNDNRDVNEVQKKALEEFDNLVKELENRGITVHVLQDTLTPATPDSIFPNNWFSTHEGGLMVVYPMFAENRQAEIAKFRATVEKIAEESQKDEPFFTIIDYSKNRERNQILEGTGSIVIDRKNKVAYCTLSPRADKEMFDKWCKETGHTGVTFVSYQEGKPIYHTNIVMGIGEKTALVGLDAIDEKDRARVRESLEAGGNEIIELTMDQLKACAGNTLELKGKDGNFIAISKMAYDSLTKEQVEKIEKTTPILVADINTIEFYGGGSVRCMMAEVF
SIO_010081: HMPREF0389_RS01415
subclass of: SO_0000673
so part of: HMPREF0389_RS01415
location: 330671..331588
location: region:330671-331588:1
so has part: feature:330671-331588:1:exon

WP_014261958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330671-331588:1:exon

HMPREF0389_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01420
old locus tag: HMPREF0389_03000
so part of: sequence
location: complement(331809..331893)
location: region:331809-331893:-1
so has part: feature:331809-331893:-1:exon
subclass of: SO_0000663

position:331809:-1
position: 331809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331893:-1
position: 331893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331809-331893:-1:exon

HMPREF0389_RS01420
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 546269
locus tag: HMPREF0389_RS01420
old locus tag: HMPREF0389_03000
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(331858..331860),aa:Leu,seq:gag)
SIO_010081: HMPREF0389_RS01420
subclass of: SO_0000673
so part of: HMPREF0389_RS01420
location: complement(331809..331893)
location: region:331809-331893:-1
so has part: feature:331809-331893:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:331809-331893:-1:exon

HMPREF0389_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01425
old locus tag: HMPREF0389_00348
so part of: sequence
location: complement(332110..332478)
location: region:332110-332478:-1
so has part: feature:332110-332478:-1:exon
subclass of: SO_0000010

position:332110:-1
position: 332110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332478:-1
position: 332478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332110-332478:-1:exon

HMPREF0389_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01425
old locus tag: HMPREF0389_00348
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014518841.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MINTIVKRGDIFYADLSPVIGSEQGGVRPVLVVQNDIGNKYSPTVIVVAITSQINKAKLPTHLEISAKEFGLAKDSVVLLEQIRTLDKQRLKDKIGKCSPRFMEKVDKALYISLGLTDMRRR
SIO_010081: HMPREF0389_RS01425
subclass of: SO_0000673
so part of: HMPREF0389_RS01425
location: complement(332110..332478)
location: region:332110-332478:-1
so has part: feature:332110-332478:-1:exon

WP_041250930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332110-332478:-1:exon

HMPREF0389_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: alr
locus tag: HMPREF0389_RS01430
old locus tag: HMPREF0389_00347
so part of: sequence
location: complement(332810..333976)
location: region:332810-333976:-1
so has part: feature:332810-333976:-1:exon
subclass of: SO_0000010

position:332810:-1
position: 332810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333976:-1
position: 333976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332810-333976:-1:exon

HMPREF0389_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: alr
locus tag: HMPREF0389_RS01430
old locus tag: HMPREF0389_00347
EC number: 5.1.1.1
inference: COORDINATES: protein motif:HMM:TIGR00492.1
GO function: GO:0008784 - alanine racemase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine racemase
translation: MRQYGATWAEINLDTLEQNYKNLKQLITHKTKVCCVLKANAYGHGSVEIAKLYENMGIDYIAVSNMDEALELRNAGIKLPITCLSFVPEYQYEELLKNNIDIPIYTLSQGIALNNIALKHQKVANVHIKIDSGMSRIGFLCNDMAIRDIKQLSRLDGLHFKGIFTHFARADERDKFHTQKQFYVFSKLIQSLEKQNITFDIRHCCNTAATICYPEYHLDMVRLGIALFGYYPSKEVSEKNVNIKPAMSLFSTISNLKVVEKGTGVSYGHKYIVQDDYEKIATIPIGYADGFSRALSNNCYVKIKGDKYPIVGNVCMDQSMIRLDISKEFNIGDKVVIYSDEQDMSVERLAKAMGTISYEVLCMMQRRIPRIFRRKGKVVKVVDYLRMR
SIO_010081: HMPREF0389_RS01430
subclass of: SO_0000673
so part of: HMPREF0389_RS01430
location: complement(332810..333976)
location: region:332810-333976:-1
so has part: feature:332810-333976:-1:exon

WP_014261960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332810-333976:-1:exon

HMPREF0389_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: acpS
locus tag: HMPREF0389_RS01435
old locus tag: HMPREF0389_00346
so part of: sequence
location: complement(334099..334467)
location: region:334099-334467:-1
so has part: feature:334099-334467:-1:exon
subclass of: SO_0000010

position:334099:-1
position: 334099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334467:-1
position: 334467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334099-334467:-1:exon

HMPREF0389_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: acpS
locus tag: HMPREF0389_RS01435
old locus tag: HMPREF0389_00346
EC number: 2.7.8.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007059236.1
GO function: GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO process: GO:0008610 - lipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: holo-ACP synthase
translation: MVKGVGVDIVSIKRMSNLCSKHPRTIDRLFTEKEKYYFKQKNNSIETIASFFAVKESVAKALGTGFVGFSMKDIEIFHDSYGKPYVTLYSNARMALEEKEISYVHISISHERDNAIAFCVME
SIO_010081: HMPREF0389_RS01435
subclass of: SO_0000673
so part of: HMPREF0389_RS01435
location: complement(334099..334467)
location: region:334099-334467:-1
so has part: feature:334099-334467:-1:exon

WP_014261961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334099-334467:-1:exon

HMPREF0389_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01440
old locus tag: HMPREF0389_00345
so part of: sequence
location: 334660..334917
location: region:334660-334917:1
so has part: feature:334660-334917:1:exon
subclass of: SO_0000010

position:334660:1
position: 334660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334917:1
position: 334917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334660-334917:1:exon

HMPREF0389_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01440
old locus tag: HMPREF0389_00345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017638151.1
GO function: GO:0004518 - nuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GIY-YIG nuclease family protein
translation: MNKKISFFVYILRCKDNSLYTGYTINDIKKRVEQHNNGTGAKYTRSRRPVSLVYFEEFSSKSEALKREIEIKSYSKSKKELLVKR
SIO_010081: HMPREF0389_RS01440
subclass of: SO_0000673
so part of: HMPREF0389_RS01440
location: 334660..334917
location: region:334660-334917:1
so has part: feature:334660-334917:1:exon

WP_014261962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334660-334917:1:exon

HMPREF0389_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01445
old locus tag: HMPREF0389_00344
so part of: sequence
location: 335018..336028
location: region:335018-336028:1
so has part: feature:335018-336028:1:exon
subclass of: SO_0000010

position:335018:1
position: 335018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336028:1
position: 336028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335018-336028:1:exon

HMPREF0389_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01445
old locus tag: HMPREF0389_00344
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013655425.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MINLINISKNFHTKKNTVVALDNVNLHIEKGDIFGIIGYSGAGKSTLVRCINFLEVPSQGTVQIKGVDLSSLSQKELRKQRKNIGMIFQHFNLMNNINVFDNIAAPLKRDGMSKTQINERVNSLLKLVGLEEKSAAFPRQLSGGQKQRVAIARALSNNPEILLCDEATSALDPNTTKSILYLLKKIHKTTGITIVVITHQMEVVKQICNKVAVMESGKVVEEGSLIDIFANPQNNITKAFVSQTMHGDEFLEKMKDEKQTIYKLSFLGNTTHSPLISDVIQKYYISINILFGNIEKISNSMVGNLYVELFGDSEKIKQAIDYIKQTGTRIEVISHD
SIO_010081: HMPREF0389_RS01445
subclass of: SO_0000673
so part of: HMPREF0389_RS01445
location: 335018..336028
location: region:335018-336028:1
so has part: feature:335018-336028:1:exon

WP_014261963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335018-336028:1:exon

HMPREF0389_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01450
old locus tag: HMPREF0389_00343
so part of: sequence
location: 336021..336692
location: region:336021-336692:1
so has part: feature:336021-336692:1:exon
subclass of: SO_0000010

position:336021:1
position: 336021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336692:1
position: 336692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336021-336692:1:exon

HMPREF0389_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01450
old locus tag: HMPREF0389_00343
EC number: 7.4.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009082353.1
GO function: GO:0033232 - ABC-type D-methionine transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0048473 - D-methionine transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine ABC transporter permease
translation: MISVYFPNIIDLFPELISSLWETILMITISGFFSTLFGLPLGIIMLVTSKGHILENPKLYSVLSKIVNALRSIPAIILFTALTGITRFIMGTSIGLKGSLFPLTIACIPFLAKQIELALYSIDLGVIEAYTSMGFSPFQIILKVILIEGLGGIINAITVSLVSLLSFSAIAGSVGSGGLGYFAIRYGYQGFKQDAMIVTVIIILLIVYFIQAAGDFLARKVTH
SIO_010081: HMPREF0389_RS01450
subclass of: SO_0000673
so part of: HMPREF0389_RS01450
location: 336021..336692
location: region:336021-336692:1
so has part: feature:336021-336692:1:exon

WP_014261964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336021-336692:1:exon

HMPREF0389_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: nadD
locus tag: HMPREF0389_RS01455
old locus tag: HMPREF0389_00342
so part of: sequence
location: 336840..337460
location: region:336840-337460:1
so has part: feature:336840-337460:1:exon
subclass of: SO_0000010

position:336840:1
position: 336840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337460:1
position: 337460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336840-337460:1:exon

HMPREF0389_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: nadD
locus tag: HMPREF0389_RS01455
old locus tag: HMPREF0389_00342
EC number: 2.7.7.18
inference: COORDINATES: protein motif:HMM:NF000840.1
GO function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO process: GO:0009435 - NAD biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nicotinate-nucleotide adenylyltransferase
translation: MAQKIGILGGTFNPIHIAHLYIAEAAKDYLALDKVMFIPAIHPYHKDSKNLISFEHRMKMIKEAIKDNNDFIVSNLDQELHQEKSYTIHLLKKLKTDHPNDEFFFIIGLDSLINIESWYHFEQLSQYATFACFLRNNETLPSKSIQDRLYYLKQKYNMDVLYFSTVSLDISSTKIRQSIQKEETVRYLLPDNVLQYIKKKHLYEAR
SIO_010081: HMPREF0389_RS01455
subclass of: SO_0000673
so part of: HMPREF0389_RS01455
location: 336840..337460
location: region:336840-337460:1
so has part: feature:336840-337460:1:exon

WP_014261965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336840-337460:1:exon

HMPREF0389_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: yqeK
locus tag: HMPREF0389_RS01460
old locus tag: HMPREF0389_00341
so part of: sequence
location: 337466..338065
location: region:337466-338065:1
so has part: feature:337466-338065:1:exon
subclass of: SO_0000010

position:337466:1
position: 337466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338065:1
position: 338065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337466-338065:1:exon

HMPREF0389_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: yqeK
locus tag: HMPREF0389_RS01460
old locus tag: HMPREF0389_00341
EC number: 3.6.1.41
inference: COORDINATES: protein motif:HMM:TIGR00488.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK
translation: MNLEELKLHLKNTLSPERFRHTQGVVETSAMLCDIFQEDKEKAIIAAWFHDYAKEYSSKELISFLKNKNCPIDEIEKKSTQLLHGKVAAIIAKEKYHILDQDILNAIYYHTTGRKNMSRLELIVAFADCIEPSRTYPFVNELRQYSTYDLELGFYHALNYTIAFLIKENKLIHPLTIEARNDLMERCINRKVIFCEKIS
SIO_010081: HMPREF0389_RS01460
subclass of: SO_0000673
so part of: HMPREF0389_RS01460
location: 337466..338065
location: region:337466-338065:1
so has part: feature:337466-338065:1:exon

WP_014261966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337466-338065:1:exon

HMPREF0389_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01465
old locus tag: HMPREF0389_00340
so part of: sequence
location: 338049..339293
location: region:338049-339293:1
so has part: feature:338049-339293:1:exon
subclass of: SO_0000010

position:338049:1
position: 338049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339293:1
position: 339293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338049-339293:1:exon

HMPREF0389_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01465
old locus tag: HMPREF0389_00340
inference: COORDINATES: protein motif:HMM:TIGR00350.1
GO process: GO:0070726 - cell wall assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LCP family protein
translation: MKKFLKNISIAFIILFSIISLTIYFKQDGVTNKPTEFEKYWLNATEAKERVNVLIMGIDTIEGKTDADNARTDTMIICSIDPVGKTGYILSIPRDSRVKVDGRKHKTKINHAHKYGGIELAVSTVKNTFHIPIHHYIRVNYDALIKTVDDMGGVEINILQNMDYDDNASNLHIHFKPGIQTLNGQQSMEFIRYRHGYANKDLGRIEAQQYFLDSFLRKLLSAQSITKIPKYLETLYQYVDTDMSKKEIISLAATIIKINPNDIPKKTVPGNAKTINGISYYIIDEEETQNILEYLNKGIYEKQEDITTENAPIEELSSESKKPEYSIFVYNGCGTPKITRRVSDLLKIEELPISYSGNASNFDYEKTKIYYKDNERLAKKISGIIEVGEIKQGTGAIDYREPDIVIIVGKDFKK
SIO_010081: HMPREF0389_RS01465
subclass of: SO_0000673
so part of: HMPREF0389_RS01465
location: 338049..339293
location: region:338049-339293:1
so has part: feature:338049-339293:1:exon

WP_041250745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338049-339293:1:exon

HMPREF0389_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rsfS
locus tag: HMPREF0389_RS01470
old locus tag: HMPREF0389_00339
so part of: sequence
location: 339308..339652
location: region:339308-339652:1
so has part: feature:339308-339652:1:exon
subclass of: SO_0000010

position:339308:1
position: 339308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339652:1
position: 339652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339308-339652:1:exon

HMPREF0389_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rsfS
locus tag: HMPREF0389_RS01470
old locus tag: HMPREF0389_00339
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003416416.1
GO function: GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0017148 - negative regulation of translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome silencing factor
translation: MNELKTIISAIKDKLGENIVILDIKKVSTISEYFIIASADNERKVSAIAKNVEDEMKNISYFAYSKEGYDTQKWIVLDYGECIVHIFKNEERAFYDLERLWKDAPYIDIDTILA
SIO_010081: HMPREF0389_RS01470
subclass of: SO_0000673
so part of: HMPREF0389_RS01470
location: 339308..339652
location: region:339308-339652:1
so has part: feature:339308-339652:1:exon

WP_014261968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339308-339652:1:exon

HMPREF0389_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01475
old locus tag: HMPREF0389_00338
so part of: sequence
location: complement(339795..340373)
location: region:339795-340373:-1
so has part: feature:339795-340373:-1:exon
subclass of: SO_0000010

position:339795:-1
position: 339795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340373:-1
position: 340373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339795-340373:-1:exon

HMPREF0389_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01475
old locus tag: HMPREF0389_00338
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKNISLFLMMFIVCSIIYVIFINEKNNWNSENLVRILRESKDEKTDEPSKSAMAIGIIVDTNDGEEKIAAVAAGEIGKESEQDYGLAIAEVISDDLSGNYLDLSFKVSSTVSLMSGGTAIITAYNNLNGHVLSSTKLTATSGSVTNNLNKEFFMWVGNASQVKITISEPFVTVDTGCRYPLVLCQSFILYR
SIO_010081: HMPREF0389_RS01475
subclass of: SO_0000673
so part of: HMPREF0389_RS01475
location: complement(339795..340373)
location: region:339795-340373:-1
so has part: feature:339795-340373:-1:exon

WP_014261969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339795-340373:-1:exon

HMPREF0389_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01480
old locus tag: HMPREF0389_00337
so part of: sequence
location: complement(340539..340700)
location: region:340539-340700:-1
so has part: feature:340539-340700:-1:exon
subclass of: SO_0000010

position:340539:-1
position: 340539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340700:-1
position: 340700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340539-340700:-1:exon

HMPREF0389_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01480
old locus tag: HMPREF0389_00337
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014357837.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rubredoxin
translation: METYVCSVCGYVYDPLEGDADGGIEPGTAFADLPEDWTCPNCGVGKEEFELED
SIO_010081: HMPREF0389_RS01480
subclass of: SO_0000673
so part of: HMPREF0389_RS01480
location: complement(340539..340700)
location: region:340539-340700:-1
so has part: feature:340539-340700:-1:exon

WP_014261970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340539-340700:-1:exon

HMPREF0389_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: tsf
locus tag: HMPREF0389_RS01485
old locus tag: HMPREF0389_00336
so part of: sequence
location: complement(340827..341771)
location: region:340827-341771:-1
so has part: feature:340827-341771:-1:exon
subclass of: SO_0000010

position:340827:-1
position: 340827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341771:-1
position: 341771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340827-341771:-1:exon

HMPREF0389_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: tsf
locus tag: HMPREF0389_RS01485
old locus tag: HMPREF0389_00336
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009531438.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation elongation factor Ts
translation: MQITAGMVKELREQTQAGMMDCKKALVEAEGNMEKAVDILREKGLSKAAKKAGRIAAEGLVSLVVSDDKKHGAIVEINSETDFVAKNEEFKNFVSAAAELALRAKPADLAAFKASELENGKSLEVVLNEKISKIGENMTIRRFAVESQENGTVVGYVHGAGKIAVLVNLATSSDSEKLQELGKDIAMQVASMNPKYISSDDVDQEYIAHEKEILMAQAVNENEEEAAKGKKKKPMEIIEKMVIGRLNKELKEVCLLEQPFVKDSDLTVGQVVKNVAKEVGAEIVVKSTVRFEVGEGLEKKEENFAEEVAKQMGN
SIO_010081: HMPREF0389_RS01485
subclass of: SO_0000673
so part of: HMPREF0389_RS01485
location: complement(340827..341771)
location: region:340827-341771:-1
so has part: feature:340827-341771:-1:exon

WP_014261971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340827-341771:-1:exon

HMPREF0389_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rpsB
locus tag: HMPREF0389_RS01490
old locus tag: HMPREF0389_00335
so part of: sequence
location: complement(341876..342634)
location: region:341876-342634:-1
so has part: feature:341876-342634:-1:exon
subclass of: SO_0000010

position:341876:-1
position: 341876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342634:-1
position: 342634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341876-342634:-1:exon

HMPREF0389_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rpsB
locus tag: HMPREF0389_RS01490
old locus tag: HMPREF0389_00335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007788290.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S2
translation: MSNVVSMRQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLQKTVKKIEEAYEFVSTVAAEGKPILFVGTKKQAQDAIKEEAERCGMYYVNERWLGGMLTNYKTIRTRIDRLRELEAMQEDGTFDLLPKKEVMQLLHEKSKLVKYLDGIKDMPELPGAIFIVDPRKERIAIKEAQNLGIPLIGIIDTNCDPDEIDYPIPGNDDAIRAVKLITSVISQAVIEAKQGEMNEVTEEAEVEVVEENTSNSTEE
SIO_010081: HMPREF0389_RS01490
subclass of: SO_0000673
so part of: HMPREF0389_RS01490
location: complement(341876..342634)
location: region:341876-342634:-1
so has part: feature:341876-342634:-1:exon

WP_014261972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341876-342634:-1:exon

HMPREF0389_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01495
old locus tag: HMPREF0389_00334
so part of: sequence
location: complement(342902..345082)
location: region:342902-345082:-1
so has part: feature:342902-345082:-1:exon
subclass of: SO_0000010

position:342902:-1
position: 342902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345082:-1
position: 345082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342902-345082:-1:exon

HMPREF0389_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01495
old locus tag: HMPREF0389_00334
EC number: 2.7.7.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008517788.1
GO function: GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyribonucleotide nucleotidyltransferase
translation: MSKIFEMPLGNRQLKIEIGKVAELANGACLVSCGDTVVLVTATNSALPREGIDFFPLSVDFEERLYSVGKIPGGFIKREGRPSEKAILTSRLIDRPIRPLFPKGFRNDVQVVATVLSVEPDVTPDVLAMIGSSIALSISSIPFNGPTGSVAVGLIDGQLILNPDVDQRAASDLHLTVSGTKDAIMMVEAGANEVTERTMLEAILYAHEEIKKIVSFIETIVEEVGKEKMEYVVFKADEQIESHVLEYGKEKMKAAILTKDKTERMENMDKARQEIMEHFAEIYPENIKDVEETIYKITKEGIRELILVDRIRPDNRSMDEIRPISCEVGTLPRTHGSAIFTRGQTQVMSVTTLGALGEMQTLDGLDENIEKRYMHHYNFPAYSVGEARPSRGPGRREIGHGALAERAILPMLPSKEEFAYAIRVVSEVMSSNGSTSQASVCGSTLSLLDAGVPMKRMVAGIAMGLIKEDEHLAILSDIQGMEDFLGDMDFKVAGTEEGITAIQMDIKISGIDEEILTKALEQARQGRLFILNKMREVISSPRPEISQYAPMVLQMKIDPEKIREVIGTGGKVINKIIDETGAKIDIEQDGNIFILAVERDKGKLAKQMIEEIVEEPEVGKIYRAKVTRLMDFGAFAEFMPGKEGLIHISQADIQRTDDISSLWSVGDEVEVMLMEIDDQGRMNLSRRAVMQRDVGEPIDYVSEKDKKSQRNGNRRKFDSSQRDKRK
SIO_010081: HMPREF0389_RS01495
subclass of: SO_0000673
so part of: HMPREF0389_RS01495
location: complement(342902..345082)
location: region:342902-345082:-1
so has part: feature:342902-345082:-1:exon

WP_014261973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342902-345082:-1:exon

HMPREF0389_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rpsO
locus tag: HMPREF0389_RS01500
old locus tag: HMPREF0389_00333
so part of: sequence
location: complement(345232..345495)
location: region:345232-345495:-1
so has part: feature:345232-345495:-1:exon
subclass of: SO_0000010

position:345232:-1
position: 345232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345495:-1
position: 345495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345232-345495:-1:exon

HMPREF0389_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rpsO
locus tag: HMPREF0389_RS01500
old locus tag: HMPREF0389_00333
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003375280.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S15
translation: MTAERKTEIIKEYAVHEGDTGSPEVQIAVLTGRILELNDHLKVHPKDSHSRRGLFKMVGTRRNLLKYLKSKDLERYNSLIKRLGLRK
SIO_010081: HMPREF0389_RS01500
subclass of: SO_0000673
so part of: HMPREF0389_RS01500
location: complement(345232..345495)
location: region:345232-345495:-1
so has part: feature:345232-345495:-1:exon

WP_014261974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345232-345495:-1:exon

HMPREF0389_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01505
old locus tag: HMPREF0389_00332
so part of: sequence
location: complement(345757..346689)
location: region:345757-346689:-1
so has part: feature:345757-346689:-1:exon
subclass of: SO_0000010

position:345757:-1
position: 345757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346689:-1
position: 346689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345757-346689:-1:exon

HMPREF0389_RS01505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01505
old locus tag: HMPREF0389_00332
EC number: 2.7.1.26
EC number: 2.7.7.2
inference: COORDINATES: protein motif:HMM:NF004162.0
GO function: GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional riboflavin kinase/FAD synthetase
translation: MSFKSYMNSIAISEETVVTIGNFDGLHRGHLKLMERTLEISKQKNLKSVVFTYENHPLEYVLKKKVEKLFTNRERDAKLKELGIDTILSVPFDEEIMGMSTNDFIQEILIDKLHTKYLVLGEDAHFGKGREGSAECIQSVGSQLGLTVEIIPLFFEDGVRISSSYIRQLIKKGKVDVAKEYLGRMFAITGEVIHGKENGRKLGFPTANISYDEHTVLPALGVYNTIVEYHGKHYIGATSVGYNPTISLLNNRISLEVHILDFEKEIYGEEITVRFISKIRDEMKFNSLEELKNQISKDEILIRKQHDEKY
SIO_010081: HMPREF0389_RS01505
subclass of: SO_0000673
so part of: HMPREF0389_RS01505
location: complement(345757..346689)
location: region:345757-346689:-1
so has part: feature:345757-346689:-1:exon

WP_083799659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345757-346689:-1:exon

HMPREF0389_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: truB
locus tag: HMPREF0389_RS01510
old locus tag: HMPREF0389_00331
so part of: sequence
location: complement(346742..347638)
location: region:346742-347638:-1
so has part: feature:346742-347638:-1:exon
subclass of: SO_0000010

position:346742:-1
position: 346742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347638:-1
position: 347638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346742-347638:-1:exon

HMPREF0389_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: truB
locus tag: HMPREF0389_RS01510
old locus tag: HMPREF0389_00331
EC number: 5.4.99.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012620416.1
GO function: GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA pseudouridine(55) synthase TruB
translation: MMDGFINILKPTGMTSHDVVSIVRRLLRQKKVGHTGTLDPNAAGVLPICIGRATKFSDFVLKDKKRYYAKVNLGLQTDTLDSYGMVTDRRKVVPFQKEQLLQAIQKFIGEISQIPPKYSAIKVNGKRLYELARLGQELSEIEIKERNIFIHSINLLECDVDSFSLDIICSSGTYIRSLAVDIAAEIGNIGYLSLLIRTESGNFYIQDSITLEELEGQTESLDQNNIIIPIENILLHYPEYTLDDLLSKIYLNGGTVFLNNFDLTTGIYRIYSKEDMLLGIGTIFESNSKKYLKNIKFV
SIO_010081: HMPREF0389_RS01510
subclass of: SO_0000673
so part of: HMPREF0389_RS01510
location: complement(346742..347638)
location: region:346742-347638:-1
so has part: feature:346742-347638:-1:exon

WP_014261976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346742-347638:-1:exon

HMPREF0389_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01515
old locus tag: HMPREF0389_00330
so part of: sequence
location: complement(347635..348594)
location: region:347635-348594:-1
so has part: feature:347635-348594:-1:exon
subclass of: SO_0000010

position:347635:-1
position: 347635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348594:-1
position: 348594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347635-348594:-1:exon

HMPREF0389_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01515
old locus tag: HMPREF0389_00330
EC number: 3.1.3.7
inference: COORDINATES: protein motif:HMM:NF013528.2
GO function: GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional oligoribonuclease/PAP phosphatase NrnA
translation: MDFRDIIEKNKLFIISSHIGPDGDNVSSSLAFKLALQELGKEAYYVIDDKLPQNLSFLRDYDKQMTSEKIEGYLEGKEYVFIGLDCGVIDRLKISDKIFKNSSHVINIDHHEQNEMYGDYNFVDENMSSTCELVYHHLKKYYPQCLTKDIATCLYAGILTDTGNFMYDCADSTTLMAASDLLEKGADRTTIVDCIFRSQDENYLKLLSEVLSTIQVDGILATAYLKKDMLERHHICYNDVENLVDYVINIHGVRMGILFKEKDINEIKLSLRSKGDLDVASFARKYGGGGHKNAAGCSFAGLLEDVMESVINNAREYVL
SIO_010081: HMPREF0389_RS01515
subclass of: SO_0000673
so part of: HMPREF0389_RS01515
location: complement(347635..348594)
location: region:347635-348594:-1
so has part: feature:347635-348594:-1:exon

WP_014261977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347635-348594:-1:exon

HMPREF0389_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rbfA
locus tag: HMPREF0389_RS01520
old locus tag: HMPREF0389_00329
so part of: sequence
location: complement(348607..348972)
location: region:348607-348972:-1
so has part: feature:348607-348972:-1:exon
subclass of: SO_0000010

position:348607:-1
position: 348607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348972:-1
position: 348972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348607-348972:-1:exon

HMPREF0389_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rbfA
locus tag: HMPREF0389_RS01520
old locus tag: HMPREF0389_00329
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013361902.1
GO function: GO:0019843 - rRNA binding [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosome-binding factor RbfA
translation: MSYDRTRRISEEIRKVVGNMLLEGEIKDTKIRNSKGLISVTSVEVVRDLKYAYIYISVLGDNPETILDGLKRASGYVRKEVGRQVDLRYTPEIIFRLDHSIENGVEMSKMISELNQNSTEE
SIO_010081: HMPREF0389_RS01520
subclass of: SO_0000673
so part of: HMPREF0389_RS01520
location: complement(348607..348972)
location: region:348607-348972:-1
so has part: feature:348607-348972:-1:exon

WP_014261978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348607-348972:-1:exon

HMPREF0389_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: infB
locus tag: HMPREF0389_RS01525
old locus tag: HMPREF0389_00328
so part of: sequence
location: complement(348985..351264)
location: region:348985-351264:-1
so has part: feature:348985-351264:-1:exon
subclass of: SO_0000010

position:348985:-1
position: 348985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351264:-1
position: 351264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348985-351264:-1:exon

HMPREF0389_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: infB
locus tag: HMPREF0389_RS01525
old locus tag: HMPREF0389_00328
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009080726.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-2
translation: MEKIRVYKLAQELNISSKKVIETAVKLSINVASHMSTLTADDSNKIRVTLSNASSKKETNKTVNQSKKKQLNQNYSEKDSDKILKKQDNKEKLKPSIISQPEAVDKNKGEDSLKNKKMKKKVKKNEKIKVKSAPIQEKQSGYHNDKMMKKSKGKKHDYVNKKEKESKQDMSEVVKQDEGIFEIDDTIVVGDLAQILNVPATDVIMSIMKLGIMANINQTIKFETAEKVALDYDVMLVQKEKEEEVVDFVIEEDREEDLKPRSPIVTVMGHVDHGKTTLLDTIRNTKVTNSEAGGITQHIGASEVVINGKKIVFLDTPGHEAFTEMRARGAQVTDIVIIVVAADDGIMPQTIEAIDHVKAAGVPMIIAINKIDKPTANIDRVRQELSEKGILVESWGGTTIDVPVSAKTGEHIDDLLEMVLLVAEMEELRANPNRKAIGTVVESKLDKGRGTVATLIVQNGTLKEGDPVVAGTAYGRVRAMLNSKGKRIKKAGPSTAVEIQGLNSVPDAGDQFFAVSSDKEARDLGTARQERKREEYMKQTSKISLEDLFEKMQSGEMKELNIIVKADVQGSIDAIKKSFEKISNEEVVVKVIHGSVGAITESDVMLASASNAIIIGFNVRPATGAVSIAEREKVDMRTYRIIYEAIEDVEKAMKGMLSPEFVEEELGKAEVRMPFKVPKVGMIAGSYVLEGKIQRNAKVRLVRDGIVIYEGEIDSLRRFKDDVKEVAAGYDCGIGLTNYNDIKEGDIIENYIIKEIKKG
SIO_010081: HMPREF0389_RS01525
subclass of: SO_0000673
so part of: HMPREF0389_RS01525
location: complement(348985..351264)
location: region:348985-351264:-1
so has part: feature:348985-351264:-1:exon

WP_014261979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348985-351264:-1:exon

HMPREF0389_RS01530
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01530
old locus tag: HMPREF0389_00327
so part of: sequence
location: complement(351242..351571)
location: region:351242-351571:-1
so has part: feature:351242-351571:-1:exon
subclass of: SO_0000010

position:351242:-1
position: 351242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351571:-1
position: 351571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351242-351571:-1:exon

HMPREF0389_RS01530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01530
old locus tag: HMPREF0389_00327
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005365597.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosomal L7Ae/L30e/S12e/Gadd45 family protein
translation: MKNKVLTLIGFAKKCGKAFSGEEITLEKIKSKKAKIVFIASDASGNTAKRLRDKANYRGIVICDIFSRDELGKAIGEQERVSICINDKGFAKAIMELLGGENYGENKSI
SIO_010081: HMPREF0389_RS01530
subclass of: SO_0000673
so part of: HMPREF0389_RS01530
location: complement(351242..351571)
location: region:351242-351571:-1
so has part: feature:351242-351571:-1:exon

WP_014261980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351242-351571:-1:exon

HMPREF0389_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01535
old locus tag: HMPREF0389_00326
so part of: sequence
location: complement(351561..351848)
location: region:351561-351848:-1
so has part: feature:351561-351848:-1:exon
subclass of: SO_0000010

position:351561:-1
position: 351561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351848:-1
position: 351848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351561-351848:-1:exon

HMPREF0389_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01535
old locus tag: HMPREF0389_00326
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009889094.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YlxR family protein
translation: MASGVGKIKKVPQRKCIVCGDHSDKRLLFRIVKTKQGDIFLDLTSKANGRGAYLCSKPECFEKMYKNRLLDKTFKMDVSEEVYDTLRKELKANEE
SIO_010081: HMPREF0389_RS01535
subclass of: SO_0000673
so part of: HMPREF0389_RS01535
location: complement(351561..351848)
location: region:351561-351848:-1
so has part: feature:351561-351848:-1:exon

WP_014261981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351561-351848:-1:exon

HMPREF0389_RS01540
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: nusA
locus tag: HMPREF0389_RS01540
old locus tag: HMPREF0389_00325
so part of: sequence
location: complement(351893..353131)
location: region:351893-353131:-1
so has part: feature:351893-353131:-1:exon
subclass of: SO_0000010

position:351893:-1
position: 351893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353131:-1
position: 353131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351893-353131:-1:exon

HMPREF0389_RS01540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: nusA
locus tag: HMPREF0389_RS01540
old locus tag: HMPREF0389_00325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003419468.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor NusA
translation: MNAEFISAIQQLEDEKGISKDILIEAVEMALVKAYKKNFVEKNNYNDTLVEKDPKKLSLEKNNVQVSIDRETGDIKVFSKKEVVNKREIDLLEGEISLEGAQEIDINYKVGDIVQEEITPRNFGRIATQTARQVVIQKITEAGRDIIYNEFSNRESEIMIGEVVRIGKHNTCHLNLSLVSEKGHTIYGEATMISQEQIPYEEYSVGQRIIVYILEVKKHNNVPQILVSRSRPGLVKRLFEREVPEISDGIVQIKSIAREAGSRTKLSVCSVDPSVDAIGACVGGKGIRVANIVEELHGEKIDIVNYDENPIEYISNALSPSKVVDVSVNEEEKTAKVIVPDYQLSLAIGKEGQNARLAAKLTGWKIDIKSESQALQETMDDGDFSSQMENRDNWIIPQEDSDDSDTDDGNDI
SIO_010081: HMPREF0389_RS01540
subclass of: SO_0000673
so part of: HMPREF0389_RS01540
location: complement(351893..353131)
location: region:351893-353131:-1
so has part: feature:351893-353131:-1:exon

WP_014261982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351893-353131:-1:exon

HMPREF0389_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rimP
locus tag: HMPREF0389_RS01545
old locus tag: HMPREF0389_00324
so part of: sequence
location: complement(353156..353614)
location: region:353156-353614:-1
so has part: feature:353156-353614:-1:exon
subclass of: SO_0000010

position:353156:-1
position: 353156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353614:-1
position: 353614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353156-353614:-1:exon

HMPREF0389_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rimP
locus tag: HMPREF0389_RS01545
old locus tag: HMPREF0389_00324
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007287259.1
GO process: GO:0000028 - ribosomal small subunit assembly [Evidence IEA]; GO:0042274 - ribosomal small subunit biogenesis [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome maturation factor RimP
translation: MSKRIAVQIEELFLSVLDEKYELVDVEYVKEGAFYYLRVFVDKDGGLDIDEISDITRVLNKLLDEKDPIQQQYFLEVSTPGLGRALKKERDFIRESGKEIELKLYQPVNGQKELSGVLIGLDETGNIVIQSEDEQLCLSKKDIASIKLKVDF
SIO_010081: HMPREF0389_RS01545
subclass of: SO_0000673
so part of: HMPREF0389_RS01545
location: complement(353156..353614)
location: region:353156-353614:-1
so has part: feature:353156-353614:-1:exon

WP_014261983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353156-353614:-1:exon

HMPREF0389_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01550
old locus tag: HMPREF0389_00323
so part of: sequence
location: complement(353850..354434)
location: region:353850-354434:-1
so has part: feature:353850-354434:-1:exon
subclass of: SO_0000010

position:353850:-1
position: 353850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354434:-1
position: 354434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353850-354434:-1:exon

HMPREF0389_RS01550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01550
old locus tag: HMPREF0389_00323
inference: COORDINATES: protein motif:HMM:NF019575.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prepilin-type N-terminal cleavage/methylation domain-containing protein
translation: MKKKDRGYILIEVLIVITISVLIVQYLLQFVISTQKYVNSNINKDKIFLDQDMIAGIIESQFSKSVSIDEVLTTDGKTIVEIPTSEISIKCIKLSQLDDGSENYNIGFGNVSKFYEVNTFIFLRRDIPTNPICVHKIKSGKDVHCGQVIGKFHYEIGNGVKEMTIKRISEKDFEIGIILENYEEKYHFFVSLLE
SIO_010081: HMPREF0389_RS01550
subclass of: SO_0000673
so part of: HMPREF0389_RS01550
location: complement(353850..354434)
location: region:353850-354434:-1
so has part: feature:353850-354434:-1:exon

WP_014261984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353850-354434:-1:exon

HMPREF0389_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01555
old locus tag: HMPREF0389_00322
so part of: sequence
location: complement(354418..354906)
location: region:354418-354906:-1
so has part: feature:354418-354906:-1:exon
subclass of: SO_0000010

position:354418:-1
position: 354418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354906:-1
position: 354906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354418-354906:-1:exon

HMPREF0389_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01555
old locus tag: HMPREF0389_00322
inference: COORDINATES: protein motif:HMM:NF019575.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prepilin-type N-terminal cleavage/methylation domain-containing protein
translation: MIKLKRRGFSLIEIVIVIAIIVSIATYRISFSTTNYIKERSDAYQLKYVCEYCRKYSCSSGQIIRLYIKKDSEEKYCYSVRDAANQSIYEGGLSNHVILYSGKDKNSLVPINDMCIGYNHHHAFEKNGIMSVYIGSNQKSKVFFKMTIVPISGRVLIIEEKG
SIO_010081: HMPREF0389_RS01555
subclass of: SO_0000673
so part of: HMPREF0389_RS01555
location: complement(354418..354906)
location: region:354418-354906:-1
so has part: feature:354418-354906:-1:exon

WP_014261985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354418-354906:-1:exon

HMPREF0389_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01560
old locus tag: HMPREF0389_00321
so part of: sequence
location: complement(354906..355520)
location: region:354906-355520:-1
so has part: feature:354906-355520:-1:exon
subclass of: SO_0000010

position:355520:-1
position: 355520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354906-355520:-1:exon

HMPREF0389_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01560
old locus tag: HMPREF0389_00321
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRIRKGSILISTIMIMTTIVVSVSLITASITLKRRFVNLDSFRVQKDLDQRSIQVLLCSYTKCVVDEQWRHMADTCYERVGSMQNSSEEDVINDMEYRFYNSTYYTKGMFDTKDWKEALHLSRLYVELYKVKKVEYVDSAGDSKNVMCFLYRGNGRRLESTFYFFGMVNVECPDIKLEKDKSVSKQVDWDSFIKNGGVNFIKKE
SIO_010081: HMPREF0389_RS01560
subclass of: SO_0000673
so part of: HMPREF0389_RS01560
location: complement(354906..355520)
location: region:354906-355520:-1
so has part: feature:354906-355520:-1:exon

WP_014261986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354906-355520:-1:exon

HMPREF0389_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01565
old locus tag: HMPREF0389_00320
so part of: sequence
location: complement(355517..355843)
location: region:355517-355843:-1
so has part: feature:355517-355843:-1:exon
subclass of: SO_0000010

position:355517:-1
position: 355517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355843:-1
position: 355843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355517-355843:-1:exon

HMPREF0389_RS01565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01565
old locus tag: HMPREF0389_00320
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKRKGVVLLELMVSIFICIMMSFTVIKILNINQQFDKSMHQHRNHKDKLDKQLYADGNVFLEDIKKDIKHMELRTGSFSIPVKVIEVDYSDRDNTEKLFFVESVEVP
SIO_010081: HMPREF0389_RS01565
subclass of: SO_0000673
so part of: HMPREF0389_RS01565
location: complement(355517..355843)
location: region:355517-355843:-1
so has part: feature:355517-355843:-1:exon

WP_014261987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355517-355843:-1:exon

HMPREF0389_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01570
old locus tag: HMPREF0389_00319
so part of: sequence
location: complement(355873..356307)
location: region:355873-356307:-1
so has part: feature:355873-356307:-1:exon
subclass of: SO_0000010

position:355873:-1
position: 355873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356307:-1
position: 356307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355873-356307:-1:exon

HMPREF0389_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01570
old locus tag: HMPREF0389_00319
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKKYIIFFIVFVVVDILWVIIPNIKSIHSYQLSRMEMEHQLSKYDLSAEKGKQDDRDIEYWLFQLDEIMKKEGIVILNRNFSMTQNESIQLSLELQCSKIQLQKLLESSEWNNGKYKILSINSSLEDSQYLNTTIEILIKNKG
SIO_010081: HMPREF0389_RS01570
subclass of: SO_0000673
so part of: HMPREF0389_RS01570
location: complement(355873..356307)
location: region:355873-356307:-1
so has part: feature:355873-356307:-1:exon

WP_041250746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355873-356307:-1:exon

HMPREF0389_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01575
old locus tag: HMPREF0389_00318
so part of: sequence
location: complement(356307..356714)
location: region:356307-356714:-1
so has part: feature:356307-356714:-1:exon
subclass of: SO_0000010

position:356714:-1
position: 356714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356307-356714:-1:exon

HMPREF0389_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01575
old locus tag: HMPREF0389_00318
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKFIMQEISKGMILILILLSAISVFLEYRYTKERERLDEVKSIYEMKSKNDLISEGDTDIFVDSEKLIIILSNIDEFNVIGFRSKEDVVDVEMNISENKDFDKMRKALNKKGYTSYISRGEGKGKWNSLVLTVK
SIO_010081: HMPREF0389_RS01575
subclass of: SO_0000673
so part of: HMPREF0389_RS01575
location: complement(356307..356714)
location: region:356307-356714:-1
so has part: feature:356307-356714:-1:exon

WP_014261989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356307-356714:-1:exon

HMPREF0389_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01580
old locus tag: HMPREF0389_00317
so part of: sequence
location: complement(356727..357833)
location: region:356727-357833:-1
so has part: feature:356727-357833:-1:exon
subclass of: SO_0000010

position:356727:-1
position: 356727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357833:-1
position: 357833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356727-357833:-1:exon

HMPREF0389_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01580
old locus tag: HMPREF0389_00317
inference: COORDINATES: protein motif:HMM:NF012694.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system F family protein
translation: MILKSIYSRLFTEITLKDKEKFDVFIKKELKDRERKEIFYLLYSFTNRNIPLLRTLTILKNEFPKEQRLTQVKDDIVQGISLSHSLKNRGIGDEFVFATIHIGEETGNIPDALENVYKYYQNREMMKEELLKISIYPTIVLCNIALLFLFTFNNVFPSLLEIYSDSNIPLPSSLKYFNIVYTIQKNHRAFLWVVCMWSIYGIMKFCETDYWHDYYGKIQFRVPLIRKIKRLFFQKDFLWRISCMLDGGIAIKESLKIIEETEQNRYLKKVFSEMIFLIERGKSVADAISEYPELFSVNDISYIRQGEESGGLRENIHALCFLYKRDSEKMISKISDYGQPVMILCLGLLVGIVAFSIIPLMNVTEVYM
SIO_010081: HMPREF0389_RS01580
subclass of: SO_0000673
so part of: HMPREF0389_RS01580
location: complement(356727..357833)
location: region:356727-357833:-1
so has part: feature:356727-357833:-1:exon

WP_014261990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356727-357833:-1:exon

HMPREF0389_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01585
old locus tag: HMPREF0389_00316
so part of: sequence
location: complement(357830..359278)
location: region:357830-359278:-1
so has part: feature:357830-359278:-1:exon
subclass of: SO_0000010

position:357830:-1
position: 357830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359278:-1
position: 359278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357830-359278:-1:exon

HMPREF0389_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01585
old locus tag: HMPREF0389_00316
inference: COORDINATES: protein motif:HMM:NF012652.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase, T2SS/T4P/T4SS family
translation: MNSKMFEVKNLDATDYIEEIVAERNHIFPFDLSKNMISILHNENYSEENKQRMKQYLSEKGITDIIWKEANDILISRCIVTYYTLVQSNNLMDVQLNHVLENGDILKLLDLILCCALDMNATDIHFFQSKLGLLVRFRVRGALKTFCILDKEISDDFIRAIKVKASIDISKNRNPRDGKIIFNYDAENIQVDIRVSVVPVVDNEKIHLRLLNQNSVPFEIDELEMRVEDQVKLNSFLKRDSGFLLITGPTSSGKSTTMRCCLNTIHDGEKHIISLEDPVEYAIEGITQVQVCKESEYGFLEALRAMLRQDPDVLAIGEIRDFETCNTAIQSSLTGHFVISTLHTKSAQSAIDRMVSIGINSQVLSMSLGLVVNQRLVRILCPACKEQEEYFGNDIEELSLHLGDNIYARRGCERCQYTGYDRQRPIFQVIFVDDEMKNEILQSGHLKSRKDLSVFKQVKQLFWNGDMSLEDAICFCEGDDVD
SIO_010081: HMPREF0389_RS01585
subclass of: SO_0000673
so part of: HMPREF0389_RS01585
location: complement(357830..359278)
location: region:357830-359278:-1
so has part: feature:357830-359278:-1:exon

WP_014261991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357830-359278:-1:exon

HMPREF0389_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01590
old locus tag: HMPREF0389_00315
so part of: sequence
location: complement(359291..361093)
location: region:359291-361093:-1
so has part: feature:359291-361093:-1:exon
subclass of: SO_0000010

position:359291:-1
position: 359291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361093:-1
position: 361093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359291-361093:-1:exon

HMPREF0389_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01590
old locus tag: HMPREF0389_00315
inference: COORDINATES: protein motif:HMM:NF012789.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UvrD-helicase domain-containing protein
translation: MKLFTMSSVSDVDALKVRNSEKEFYRYMSDKLKGYGFTKVVSFPYVYSDFIYIHEGRVGLFRFMDTNEDTFSILSEELLEIMEEEIQKAKDTLNCNNISFEIPYYYIMPYVDLAEFGLEDKRRYIIDKYIFERLINSEELFDNYLSCTFSEEEINCFQLTMMKDYYIFKKSTDLRSGKGNLSDINYFYRNHEYKAIFMDSVEIKHINSIKYGRTLIEGSSGTGKTTILFNRAIKLSKLFPNDEFIYITFNKQLVNKLKGILEMKNLKIDNLKIINFHQYILQLGKPYGLNMPISKGFKTFDTEFLKIFKKISQIYKNKRIYRGIFLDESENFSDIEIDFLLGSIYTKKSFFIVSQDKSKDIRNSRKSIWKDIDQVDFDEIIYLKTNYRACTNINNSINTFIDQARDYVEKYYGMGLEEYAKKGYTKIKNVGLSGYFLTKDINDSLRIICKQITMCLEQGYRYSDICIVYPFNSKKMKGNNYVFYQFLIKNMLKEQDIPFLIATDEMTNMTNKIGVTLSNVYTVSNLEFSVVFFLELESVELSFRKHILEEQIFLQEFNIIYTILNRSLERLYLFIEDRESDLNKNRWSQMIRESFFKLEE
SIO_010081: HMPREF0389_RS01590
subclass of: SO_0000673
so part of: HMPREF0389_RS01590
location: complement(359291..361093)
location: region:359291-361093:-1
so has part: feature:359291-361093:-1:exon

WP_169308501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359291-361093:-1:exon

HMPREF0389_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: nrdR
locus tag: HMPREF0389_RS01595
old locus tag: HMPREF0389_00314
so part of: sequence
location: complement(361150..361614)
location: region:361150-361614:-1
so has part: feature:361150-361614:-1:exon
subclass of: SO_0000010

position:361150:-1
position: 361150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361614:-1
position: 361614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361150-361614:-1:exon

HMPREF0389_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: nrdR
locus tag: HMPREF0389_RS01595
old locus tag: HMPREF0389_00314
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003442000.1
GO function: GO:0140110 - transcription regulator activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator NrdR
translation: MKCPFCNSVDSKVVDSRHTDENNAIRRRRECEVCKRRFTTYEKIEEIILIVEKKDKTREYFDREKVLRGIVQSCQKRPVSFEQMEEIVNDVERSLFHSMKREVKSELIGEMVMNHLKDLDDVAYVRFASVYREFKDLNSFQKELEHILQEKENK
SIO_010081: HMPREF0389_RS01595
subclass of: SO_0000673
so part of: HMPREF0389_RS01595
location: complement(361150..361614)
location: region:361150-361614:-1
so has part: feature:361150-361614:-1:exon

WP_014261993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361150-361614:-1:exon

HMPREF0389_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: ftsZ
locus tag: HMPREF0389_RS01600
old locus tag: HMPREF0389_00313
so part of: sequence
location: complement(361682..362776)
location: region:361682-362776:-1
so has part: feature:361682-362776:-1:exon
subclass of: SO_0000010

position:361682:-1
position: 361682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362776:-1
position: 362776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361682-362776:-1:exon

HMPREF0389_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: ftsZ
locus tag: HMPREF0389_RS01600
old locus tag: HMPREF0389_00313
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015756665.1
GO function: GO:0003924 - GTPase activity [Evidence IEA]
GO process: GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein FtsZ
translation: MVQLDMKDNVNSEVIKVIGVGGGGGNAVNRMIQAGIVGVEYITVNTDAQALYKSEATTKLQIGTKLTRGLGAGADPEIGRKAAEETIEEIKSELAGTDMVFITAGMGGGTGTGAAPVIANVAKEMGILTVGIVTKPFFMEGMQKLRKAEKGIKELEENVDTLIVIPNDKILEMSAKDTRLDDAFEMANQVLKQGVRGITDIIKVPGIINVDFADVRNTMVNKGIAHMGIGSAKGENRALEAAKQAIFSPLLETTVKGAKALLLNVTAPKDSFTVSEFQEASQFITENVEREDVETIIGTAYSDDEDDKIVITVIATGFDDDVEMISKEVFSKGKESDKKQNVELVDTFTEPQVFKIPDWMKGKK
SIO_010081: HMPREF0389_RS01600
subclass of: SO_0000673
so part of: HMPREF0389_RS01600
location: complement(361682..362776)
location: region:361682-362776:-1
so has part: feature:361682-362776:-1:exon

WP_014261994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361682-362776:-1:exon

HMPREF0389_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01605
old locus tag: HMPREF0389_00312
so part of: sequence
location: complement(362903..363244)
location: region:362903-363244:-1
so has part: feature:362903-363244:-1:exon
subclass of: SO_0000010

position:362903:-1
position: 362903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363244:-1
position: 363244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362903-363244:-1:exon

HMPREF0389_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01605
old locus tag: HMPREF0389_00312
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012159240.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: small basic family protein
translation: MVWAVIGILLGVIVGKYLPFTYPDSYSLYISVGILAAIDSIFGAVRASMEEKYDNEIFVTGFLSNGILASFLSYLGDRMGVPLYYAPILVFGGRLFENFAVIRRLILKRLKNH
SIO_010081: HMPREF0389_RS01605
subclass of: SO_0000673
so part of: HMPREF0389_RS01605
location: complement(362903..363244)
location: region:362903-363244:-1
so has part: feature:362903-363244:-1:exon

WP_014261995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362903-363244:-1:exon

HMPREF0389_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01610
old locus tag: HMPREF0389_00311
so part of: sequence
location: complement(363261..363947)
location: region:363261-363947:-1
so has part: feature:363261-363947:-1:exon
subclass of: SO_0000010

position:363261:-1
position: 363261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363947:-1
position: 363947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363261-363947:-1:exon

HMPREF0389_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01610
old locus tag: HMPREF0389_00311
inference: COORDINATES: protein motif:HMM:NF017734.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF881 domain-containing protein
translation: MQIKSLKNNLILFFSFFLTMVIVAQIRIIEDQYLYTSLKSIKVMEDDLSIETEELTHLHQLKEEKQKELHAFLNIKKPEKSSELLNEILLRRKMQAGYQKLQGKGVIIELMDSEEEAGDGENPNNLLIHDQDILILLNDLKVAGAEALSVNGQRIVARSEIKCSGATITINGTTYGQPFIIKAIGDPKQLEAAVLSPDSYGDILQQLYHIRLKTEIKDFVEIGAFEKE
SIO_010081: HMPREF0389_RS01610
subclass of: SO_0000673
so part of: HMPREF0389_RS01610
location: complement(363261..363947)
location: region:363261-363947:-1
so has part: feature:363261-363947:-1:exon

WP_014261996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363261-363947:-1:exon

HMPREF0389_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01615
old locus tag: HMPREF0389_00310
so part of: sequence
location: complement(363953..364687)
location: region:363953-364687:-1
so has part: feature:363953-364687:-1:exon
subclass of: SO_0000010

position:363953:-1
position: 363953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364687:-1
position: 364687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363953-364687:-1:exon

HMPREF0389_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01615
old locus tag: HMPREF0389_00310
inference: COORDINATES: protein motif:HMM:NF017734.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF881 domain-containing protein
translation: MKNNIDRLKNSKTVSRYILFFFSVIIGIGVAMQINIAEKYTGSTTTSQRIRMLQIELKNLKQKRESLEAELTELEQQLIELKESDKSGEDVEQSLKEEIDKYEKIIGYKKVFGSGVEIELTESIGQNNSALLTNYELILAIINKLNAAGAEAISLNEERYVLTSHLEVVEGQLKMNNTVIKMPVVIKAIGDMDTLEAAMNFRYGILWEMRNYYGIEAQVRKNESIEIPRYTGLIEYNYAETVKE
SIO_010081: HMPREF0389_RS01615
subclass of: SO_0000673
so part of: HMPREF0389_RS01615
location: complement(363953..364687)
location: region:363953-364687:-1
so has part: feature:363953-364687:-1:exon

WP_014261997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363953-364687:-1:exon

HMPREF0389_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01620
old locus tag: HMPREF0389_00309
so part of: sequence
location: complement(364692..365561)
location: region:364692-365561:-1
so has part: feature:364692-365561:-1:exon
subclass of: SO_0000010

position:364692:-1
position: 364692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365561:-1
position: 365561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364692-365561:-1:exon

HMPREF0389_RS01620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01620
old locus tag: HMPREF0389_00309
inference: COORDINATES: protein motif:HMM:NF015739.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FtsQ-type POTRA domain-containing protein
translation: MDKRTNKNSTNESNVVFLSEETLISDKNKQSITNSEDSNSKKSIMDLLDEKSYVKKVQIIIFIFLIGILLFLFSPICKLKMIVVLGDNTLTQEELIKLGKIQTNRSIYLISTSAIESRLTENPYVKNANITRKFPNKLIADLNMREEVATVNFEEGFVIIDHTGYILKIEQDVSKIVKPLITGVSSNKGLKVGQVLPSSEENDFRMILELISNIQNAGLIQNISEMNLQDPKNIYMITTQGLKVLLGDGEDLTYKLMQLSPILVDLHTKNITYGTIDMRFNSYPVYREN
SIO_010081: HMPREF0389_RS01620
subclass of: SO_0000673
so part of: HMPREF0389_RS01620
location: complement(364692..365561)
location: region:364692-365561:-1
so has part: feature:364692-365561:-1:exon

WP_014261998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364692-365561:-1:exon

HMPREF0389_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: murG
locus tag: HMPREF0389_RS01625
old locus tag: HMPREF0389_00308
so part of: sequence
location: complement(365589..366683)
location: region:365589-366683:-1
so has part: feature:365589-366683:-1:exon
subclass of: SO_0000010

position:365589:-1
position: 365589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366683:-1
position: 366683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365589-366683:-1:exon

HMPREF0389_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: murG
locus tag: HMPREF0389_RS01625
old locus tag: HMPREF0389_00308
EC number: 2.4.1.227
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013362107.1
GO function: GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
translation: MKVIVSGGGTGGHIYPAISIANAFCKYVDDIEILYVGTKSGPESEIVPDSGYPFEGIEVKGFLRKITIENIKRIYLAWRATKDSMRIMNSFKPDIVVGTGGYVCGPVLRAAKKYGAFTAIHEQNSFPGLTNRILSKKADVVFLGSEKAREHFHTNKEVCFVGNPVRDRVFDLTRESARQLLDMTPDEIMILSVGGSGGAESLNDAFLGALPYLLEKNISFLHITGKVHYSYFMNCVKGYQFSKNQIFKPYEKDILLYMAAADLVVCSAGATTLAEVNAMGKASIVIPKSYTAENHQEYNAKFIKEKKAGEYILEKELNSQALVDKIMKIISNGPCRKEMERNSASMFPSNPAESIVKKIMEKLS
SIO_010081: HMPREF0389_RS01625
subclass of: SO_0000673
so part of: HMPREF0389_RS01625
location: complement(365589..366683)
location: region:365589-366683:-1
so has part: feature:365589-366683:-1:exon

WP_014261999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365589-366683:-1:exon

HMPREF0389_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01630
old locus tag: HMPREF0389_00307
so part of: sequence
location: complement(366688..367824)
location: region:366688-367824:-1
so has part: feature:366688-367824:-1:exon
subclass of: SO_0000010

position:366688:-1
position: 366688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367824:-1
position: 367824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366688-367824:-1:exon

HMPREF0389_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01630
old locus tag: HMPREF0389_00307
inference: COORDINATES: protein motif:HMM:NF013279.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative peptidoglycan glycosyltransferase FtsW
translation: MKKRRQGEMDKTIFLLVTIIVMIGVIMVYSSSYIQAYYSNRKMYHFFLSNFVYAVIGFIGMLLISKLPYTFYRSDSFVFGSVLTTLLLLLGTLVFGKNINGSTRWIQVGRFTFMPSELAKMVCILYLSKVCSIRKLNINNFINLLIILAIPALFAVLIALQPHISTTITLLVIIAYILIIAGISGRYIAVILGFVSVASISLIVVSSYAKSRILAILSPSITGSRAEVQVLNSLYAISSGGFFGRGLGNSIQKYLYLSASYNDFIFSVYAEEFGFIGSVILILLFFILILRCIQLVKLAPDKFSSLLVCGIVAQIAFQFTVNVAVSLSLMPTTGVPLPFISFGGTSLVISMASMGIVLNVSRYGRRIKISRELQEVKE
SIO_010081: HMPREF0389_RS01630
subclass of: SO_0000673
so part of: HMPREF0389_RS01630
location: complement(366688..367824)
location: region:366688-367824:-1
so has part: feature:366688-367824:-1:exon

WP_014262000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366688-367824:-1:exon

HMPREF0389_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: murD
locus tag: HMPREF0389_RS01635
old locus tag: HMPREF0389_00306
so part of: sequence
location: complement(367845..369194)
location: region:367845-369194:-1
so has part: feature:367845-369194:-1:exon
subclass of: SO_0000010

position:367845:-1
position: 367845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369194:-1
position: 369194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367845-369194:-1:exon

HMPREF0389_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: murD
locus tag: HMPREF0389_RS01635
old locus tag: HMPREF0389_00306
EC number: 6.3.2.9
inference: COORDINATES: protein motif:HMM:TIGR01087.1
GO function: GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
translation: MKENNKFLMIGLGKSGLAMIDYLDSLGKNILAYDNNKDLKIRIQDYKNVEFYIGKNPSGEEMVDQVIISPGVPTDLPFVKKFIDRGIEVIGEVEFAYRHTRGTFVGVTGTNGKTTTTTLLGEFFKKYGLDTKVVGNIGNPVIEAVRNADEHTWYVSELSSFQLEMIKEFKCHIAGFLNLTPDHLNRHGSLKTYGEMKSNIFKNQTKDDYAVLNYEDDYVCHLGEKLPSKVLYFSTKREVPFGIYLKEGYIYENITGITNKLFDRKNVLLAGNHNMENVLMAMCMAYCANISFDCMKSVLSNFEGVEHRLEFVEMIDGVRYINDSKGTNPDASVKAVEAFEKNIILIAGGMDKKVPFDKFVETFTGKHLGKVKKLILLGETKNIIKDCAQKHGFDSVDLVNNMEEAVDVAHQQAEGGDIVLLSPACASWDMYDSYEIRGEDFKNRVYALR
SIO_010081: HMPREF0389_RS01635
subclass of: SO_0000673
so part of: HMPREF0389_RS01635
location: complement(367845..369194)
location: region:367845-369194:-1
so has part: feature:367845-369194:-1:exon

WP_014262001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367845-369194:-1:exon

HMPREF0389_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: mraY
locus tag: HMPREF0389_RS01640
old locus tag: HMPREF0389_00305
so part of: sequence
location: complement(369205..370167)
location: region:369205-370167:-1
so has part: feature:369205-370167:-1:exon
subclass of: SO_0000010

position:369205:-1
position: 369205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370167:-1
position: 370167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369205-370167:-1:exon

HMPREF0389_RS01640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: mraY
locus tag: HMPREF0389_RS01640
old locus tag: HMPREF0389_00305
EC number: 2.7.8.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012064000.1
GO function: GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospho-N-acetylmuramoyl-pentapeptide- transferase
translation: MSIVFASIISFVIAVCLGPVVIPVLRKLKFGQTEREEGPESHQIKSGTPTMGGFIFIIPITIVTFLIGGFYIDTVLPVLALLLFGSIGFIDDYIKVVKKRNLGLHAYQKIILQFTFAMVVSLLEVKYSSLGTSVYIPFSNKLWDMGCLYIPFLVILLIGVSNSVNLTDGLDGLCTSVTILVMLFFGVLSNCMHSMGLVSFNVAVLGSCLGFLLYNKYPAKVFMGDTGSMALGGAVAISAIMLHTALILPFVGIIYMLEALSVIVQVVSFKTTGKRVFRMSPLHHHFELGGWSEVKVTIVFTTITFIFCIIGWYGLAGVCF
SIO_010081: HMPREF0389_RS01640
subclass of: SO_0000673
so part of: HMPREF0389_RS01640
location: complement(369205..370167)
location: region:369205-370167:-1
so has part: feature:369205-370167:-1:exon

WP_014262002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369205-370167:-1:exon

HMPREF0389_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: murF
locus tag: HMPREF0389_RS01645
old locus tag: HMPREF0389_00304
so part of: sequence
location: complement(370186..371544)
location: region:370186-371544:-1
so has part: feature:370186-371544:-1:exon
subclass of: SO_0000010

position:370186:-1
position: 370186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371544:-1
position: 371544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370186-371544:-1:exon

HMPREF0389_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: murF
locus tag: HMPREF0389_RS01645
old locus tag: HMPREF0389_00304
EC number: 6.3.2.10
inference: COORDINATES: protein motif:HMM:TIGR01143.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
translation: MNILKFSQIVEWTEGVVLGDSMFSESIYSITTDSRKVKQGDLFIAIKGEHFDGNHFVDMALDNGAVAVLSSISHKSPRVITVPDTVKALGKLASGYRDMLDIPVISITGSSGKTTTKDMIFYALNSQCNAYRTEGNFNNEIGMPLTILNSDEEHDVMILEMGMSSLGEIEYLCSIAKPNIGVITNIGTAHLEQLGSQEKIFEAKMEITSFMHEKDILLVNGEDKFLRNLDKDVYQPMIKTFGFSNSCDYFCKNYDYREDSTDICAMIDGLEVNYTIPSLGKHNILNSLAALGVASVLQMDLQKAAKSLIDFQPSKLRMQIEKKDGITIINDSYNANPDSVKSVLSILAEKNNVRRIAILGDMLELGRDSDKYHRQIGECAAHSCDILIGIGMFSDYMREGALEHGMDEGFCYSFRTQEESVTTIKDIMRVGDVVLLKGSRGMAMEKLIDLIF
SIO_010081: HMPREF0389_RS01645
subclass of: SO_0000673
so part of: HMPREF0389_RS01645
location: complement(370186..371544)
location: region:370186-371544:-1
so has part: feature:370186-371544:-1:exon

WP_014262003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370186-371544:-1:exon

HMPREF0389_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01650
old locus tag: HMPREF0389_00303
so part of: sequence
location: complement(371581..373968)
location: region:371581-373968:-1
so has part: feature:371581-373968:-1:exon
subclass of: SO_0000010

position:371581:-1
position: 371581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373968:-1
position: 373968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371581-373968:-1:exon

HMPREF0389_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01650
old locus tag: HMPREF0389_00303
inference: COORDINATES: protein motif:HMM:NF013100.2
GO function: GO:0008658 - penicillin binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PASTA domain-containing penicillin-binding protein
translation: MKQIEQRKQRDFRLKITVIFFSVIVSILVGKLLLVQVIDSKNYSSKASYQQYRDVEVKPKRGNIYDRNGKELAVSVSTYDVYVELSYAKEYDKQEKKLKKWEDGEWEEFSRNVGGILGEDSNKILEKVRQNQDKSRFILMKKIDYAKKLELDKLNYKVLFYEESKRRLYPYGKFASYILGHTSKDNVGLAGIEAYFNKELNGIPGRKIVLSDAKSRELEDHSIRYHEPVNGYHVVSTIDEVIQHYVEKAMEQSYIENNSKRSMAIVIDPKTGDILAMAAKPDYNPETPNELYYYRFREAMSNAKTNEEQLEVLNSMWRNPMVSDLYEPGSVFKVITASAGIEEGVVTPNSTFVDKGYVEVAGQKLSNWSKKPFGTIDFRKAVGQSVNTVFIEVAKRLGSEKFLEYIYAFGFGKKTGVSLPGEAEGLIYSLDKLGPVQQATMSFGQSISVTPIQMVMAVSAVANNGELMKPRLVREIVSDDGEIIQRFEPEVVRRPISKKTNETMLELLENVVKKEGGKKAAIFGYRIAGKSGTAQKVIDGKYPKGYYISSFVGIAPVEDPKVVVLVITDEPHGQHGFYGGGNSAPFVGMILQDTLRYMGVTPNAIVSNNTNIEKVDIPEVRNMTFKEARVLLNSHHLKYTIDVDSAKDDTLVVDMFPKAGETVPIGSSIVLYFEGKKMDEVLMPNLIGKTVSESQKIVNSLGLRFNFSGNGKAIKQFPEPNKLVKKGSMVNVKFEDSSSSKPSSNEKSGSSETKENLIEQNKNTKKDSSETNNSSDANSLENREEDMPSVIRMSN
SIO_010081: HMPREF0389_RS01650
subclass of: SO_0000673
so part of: HMPREF0389_RS01650
location: complement(371581..373968)
location: region:371581-373968:-1
so has part: feature:371581-373968:-1:exon

WP_014262004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371581-373968:-1:exon

HMPREF0389_RS01655
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01655
old locus tag: HMPREF0389_00302
so part of: sequence
location: complement(374006..374665)
location: region:374006-374665:-1
so has part: feature:374006-374665:-1:exon
subclass of: SO_0000010

position:374006:-1
position: 374006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374665:-1
position: 374665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374006-374665:-1:exon

HMPREF0389_RS01655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01655
old locus tag: HMPREF0389_00302
inference: COORDINATES: protein motif:HMM:NF016860.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein FtsL
translation: MRKESKKNIVSKKQNEKNPYRNSQSEAYHKMKEKMQSEKSGVSLNSDNISGKKKQKKGLKKIFRKKKHVNKGSLVDNSSNLDNAVTLKNKKSSKENIKSTEMLHSGKTDLKRRGIIQERRNKNRKVISKSRKVTSLIFFVALLVSFVFVILIYRNTQIVKLKYDINELNKELLNLQNEKEILEVQMESNNRSDVIEKRAREQLGMDYPKEDKITYIKVN
SIO_010081: HMPREF0389_RS01655
subclass of: SO_0000673
so part of: HMPREF0389_RS01655
location: complement(374006..374665)
location: region:374006-374665:-1
so has part: feature:374006-374665:-1:exon

WP_041250748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374006-374665:-1:exon

HMPREF0389_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rsmH
locus tag: HMPREF0389_RS01660
old locus tag: HMPREF0389_00301
so part of: sequence
location: complement(374701..375633)
location: region:374701-375633:-1
so has part: feature:374701-375633:-1:exon
subclass of: SO_0000010

position:374701:-1
position: 374701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375633:-1
position: 375633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374701-375633:-1:exon

HMPREF0389_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rsmH
locus tag: HMPREF0389_RS01660
old locus tag: HMPREF0389_00301
EC number: 2.1.1.199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003427011.1
GO function: GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
translation: MDFLHKPVMLNECIDMLNIVPSGIYVDGTLGGAGHSLEIVKRLDSGKLIAFDQDIEAIKNAKIKLKSYEDKVILIHDNFRNIKKSLEDIDIFRINGLLLDLGVSSYQLDSPERGFSYRYDAPLDMRMNQSSQISAKYIVNTYSEEDLKRIIRDYGEEKWASRIAQFIVEERMKKPIDTTGELVQIIKAAIPKKAREEEQHPAKRTFQAIRIETNHELDVIHDVLESAVELLLPGGVISVITFHSLEDRIVKNFFRDESTGCICSPEIPVCVCNHQARLRLAHRKPLVPSEEELRENPRSRSAKVRGAIKL
SIO_010081: HMPREF0389_RS01660
subclass of: SO_0000673
so part of: HMPREF0389_RS01660
location: complement(374701..375633)
location: region:374701-375633:-1
so has part: feature:374701-375633:-1:exon

WP_014262006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374701-375633:-1:exon

HMPREF0389_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: lgt
locus tag: HMPREF0389_RS01665
old locus tag: HMPREF0389_00300
so part of: sequence
location: complement(375687..376439)
location: region:375687-376439:-1
so has part: feature:375687-376439:-1:exon
subclass of: SO_0000010

position:375687:-1
position: 375687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376439:-1
position: 376439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375687-376439:-1:exon

HMPREF0389_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: lgt
locus tag: HMPREF0389_RS01665
old locus tag: HMPREF0389_00300
EC number: 2.5.1.145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013362115.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO process: GO:0009249 - protein lipoylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prolipoprotein diacylglyceryl transferase
translation: MDPVAFEIFGLEIRWYAIFITFAMLLGVFLVSKQGKKEGFVENDLMDIFLCAFPLSIIGARLYYVLFRYSVYKGDVLSMLNIRQGGLAIHGGLIGAFIGGYFIVRKYGLNLWKTLDLYVPYLALGQAIGRWGNFMNQEAHGGPTDLPWGIMIDGVRVHPTFLYESILDFVLFVFLIYIRKNKKFDGQMISIYLIVYSIGRFFIEGLRTDSLMIGSFKIAQTVSVVLIIVGFGIWIMRKNNELDGAYVKRC
SIO_010081: HMPREF0389_RS01665
subclass of: SO_0000673
so part of: HMPREF0389_RS01665
location: complement(375687..376439)
location: region:375687-376439:-1
so has part: feature:375687-376439:-1:exon

WP_014262007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375687-376439:-1:exon

HMPREF0389_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01670
old locus tag: HMPREF0389_00299
so part of: sequence
location: complement(376492..377784)
location: region:376492-377784:-1
so has part: feature:376492-377784:-1:exon
subclass of: SO_0000010

position:376492:-1
position: 376492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377784:-1
position: 377784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376492-377784:-1:exon

HMPREF0389_RS01670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01670
old locus tag: HMPREF0389_00299
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006439962.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pitrilysin family protein
translation: MKQHSMMSRLKEEIFHKKLSNNMELFFMKKEGFTKKYAVFATNFGSNDLSFVSPHTKEQVTVNEGIAHFLEHKMFEQPNGTDAFEKFSEIGADANAFTNFDMTAYLFSSTDFFYEGLEHLISYVQTPFFTKENVDKEKGIIAQEIKIYQDNPVWVLFFNALKAMYINHNNRIDIAGTVESIYRITPEELYTCYNTFYSPSNMALFVIGDLDWNDIVNTVEKTVKNDLAFEGKVHRLEKKEPNKISQKTIVQKFPVSIPMFMIAFKEKMDGEHRGKDLMKKMISTEIILDLLFRKGSELNEELYNENLIFSTLDCEYNASRNYGYTLISAESRKVTTVIQKIMDCIGKSKKIGLNQEDFDRVKKSRIGSYIKSFDAMEGLANNYVSYYFQGMDWFEYGEILEEITLEFCQDRLEQHFVEDMKVVSFINPKE
SIO_010081: HMPREF0389_RS01670
subclass of: SO_0000673
so part of: HMPREF0389_RS01670
location: complement(376492..377784)
location: region:376492-377784:-1
so has part: feature:376492-377784:-1:exon

WP_014262008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376492-377784:-1:exon

HMPREF0389_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01675
old locus tag: HMPREF0389_00298
so part of: sequence
location: complement(377771..379054)
location: region:377771-379054:-1
so has part: feature:377771-379054:-1:exon
subclass of: SO_0000010

position:377771:-1
position: 377771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379054:-1
position: 379054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377771-379054:-1:exon

HMPREF0389_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01675
old locus tag: HMPREF0389_00298
inference: COORDINATES: protein motif:HMM:NF017044.2
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pitrilysin family protein
translation: MSIRKTDLCHGVTFRKIDCTQFKTNIIEVYFRKELSRDDVTQNSLVPYVLKSGTKNYPTDMRLSKHLQELYGTKLGISVSKAGENQVIGFKMSFVREEFLEESILESVISILSEIIFSPVLEDGVFLRKYVDTEKEVLKESILAKINDKGHYAKEMCIEKMCEEEPYGIVEEGYLEDLDEITPETLYQQYQNLLSYSLVDIVVEGTMDFDRTVGLIQQYFSFPTERSFVLKNEVVAKTVETVKEYEETMDIEQGKLVMGFRTNRSIRDDDYYALLMYSVILGNGSFSKLFRVVREKYSLCYSIGTSLEKLKGIMFIQTGIDSKNKAQVMRLIQEQMKEMEMKNISEEEILQGKKLVINGFKSVKDSVMGLCDFYYFQTLHGNEKSIEEIIDSIQSVTVEEIAKVAHDIQLDTIFFLRGKGEVSNETT
SIO_010081: HMPREF0389_RS01675
subclass of: SO_0000673
so part of: HMPREF0389_RS01675
location: complement(377771..379054)
location: region:377771-379054:-1
so has part: feature:377771-379054:-1:exon

WP_014262009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377771-379054:-1:exon

HMPREF0389_RS08835
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS08835
old locus tag: HMPREF0389_00297
so part of: sequence
location: complement(379104..379277)
location: region:379104-379277:-1
so has part: feature:379104-379277:-1:exon
subclass of: SO_0000010

position:379104:-1
position: 379104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379277:-1
position: 379277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379104-379277:-1:exon

HMPREF0389_RS08835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS08835
old locus tag: HMPREF0389_00297
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004606137.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF896 domain-containing protein
translation: MKPELINRINVLAHKSKTEGLTEDEKIEQQQLRKEYLDAFRKNFKKQLDNIEIEYRD
SIO_010081: HMPREF0389_RS08835
subclass of: SO_0000673
so part of: HMPREF0389_RS08835
location: complement(379104..379277)
location: region:379104-379277:-1
so has part: feature:379104-379277:-1:exon

WP_014262010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379104-379277:-1:exon

HMPREF0389_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01680
old locus tag: HMPREF0389_00296
so part of: sequence
location: 380050..380880
location: region:380050-380880:1
so has part: feature:380050-380880:1:exon
subclass of: SO_0000010

position:380050:1
position: 380050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380880:1
position: 380880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380050-380880:1:exon

HMPREF0389_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01680
old locus tag: HMPREF0389_00296
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007062484.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA 2-thiocytidine(32) synthetase TtcA
translation: MNTNTSLPIPTKEMERALIKKFRKYLWSPFIRAIIDFEMIQQNDRIAIAISGGKDSLVMAKLMQELYRHSDIPFEPVFISMNPGFSKENESSLIANCKAMDIPVHFFQSDIFEVTTSIAKENPCYMCARMRRGALYGKAEELGCNKLALGHHFNDVNETTIMNLLYTGCFKTMLPKLKSTNFNNMEIIRPLYYVYEEHIHKYMNYIQIFPMDCGCTVTKNEVSSKRKEIKNLIATLKIQNPNVEKCIFKSIQNINIDCCISWQYKDKNYFYLEDNY
SIO_010081: HMPREF0389_RS01680
subclass of: SO_0000673
so part of: HMPREF0389_RS01680
location: 380050..380880
location: region:380050-380880:1
so has part: feature:380050-380880:1:exon

WP_014262011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380050-380880:1:exon

HMPREF0389_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rbsB
locus tag: HMPREF0389_RS01685
old locus tag: HMPREF0389_00295
so part of: sequence
location: complement(381236..382156)
location: region:381236-382156:-1
so has part: feature:381236-382156:-1:exon
subclass of: SO_0000010

position:381236:-1
position: 381236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382156:-1
position: 382156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381236-382156:-1:exon

HMPREF0389_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rbsB
locus tag: HMPREF0389_RS01685
old locus tag: HMPREF0389_00295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008411021.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose ABC transporter substrate-binding protein RbsB
translation: MRKRLALLLTAMLMVTMVFVGCGEKEETKSDVQAETGGKVGLVVSTLDNPFFVDLKTGAEEKAAELGLELIVLDSQNDPAKELSNVEDLITKEVKILLINPTDSDAVASAVAAANEAGVPVVTLDRGANSGDVVTHIASDNVAGGKMAGEYIIEQLGGKGNVVELEGIPGTSAATDRGQGFNEAIAGKEITVVAKQTANFDRTEGLSVMENILQAQPEIDAVFAHNDEMALGALEAIKASNRDIKVVGFDATDDAKTAVEAGEMLATVAQQPKLIGSLGVETAGKILAGEKTEASIPVELQLIVKK
SIO_010081: HMPREF0389_RS01685
subclass of: SO_0000673
so part of: HMPREF0389_RS01685
location: complement(381236..382156)
location: region:381236-382156:-1
so has part: feature:381236-382156:-1:exon

WP_014262012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381236-382156:-1:exon

HMPREF0389_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01690
old locus tag: HMPREF0389_00294
so part of: sequence
location: complement(382170..383123)
location: region:382170-383123:-1
so has part: feature:382170-383123:-1:exon
subclass of: SO_0000010

position:382170:-1
position: 382170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383123:-1
position: 383123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382170-383123:-1:exon

HMPREF0389_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01690
old locus tag: HMPREF0389_00294
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007440333.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose ABC transporter permease
translation: MLKKISIKKMKPVLGLILFSVVITIIRPNFMTSANLLNVLRQTSINAIIAAGMTFVILTGGIDLSVGSILAFSSAVGVWMLQTGNGIAVSVLVCLVIGALAGLFNSVVITRGNIQPFIATLATMTLLRGATLVFTGGKPLAISFSKDAINLSSLCIFQKIGSGKVLGIPIPIIIMIVVFLLCWHILRNMAIGRYIYAIGGNEEAAKLSGLNVKKIKAMAYVFNGVLAALAGLILASRLVSAQPTAGNGYELDAIAAVVLGGTSLAGGQGSVLGTILGALIIGVLNNALNLMDVSSYYQMICKAIVILIAVLLDRKEK
SIO_010081: HMPREF0389_RS01690
subclass of: SO_0000673
so part of: HMPREF0389_RS01690
location: complement(382170..383123)
location: region:382170-383123:-1
so has part: feature:382170-383123:-1:exon

WP_014262013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382170-383123:-1:exon

HMPREF0389_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01695
old locus tag: HMPREF0389_00293
so part of: sequence
location: complement(383139..384620)
location: region:383139-384620:-1
so has part: feature:383139-384620:-1:exon
subclass of: SO_0000010

position:383139:-1
position: 383139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384620:-1
position: 384620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383139-384620:-1:exon

HMPREF0389_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01695
old locus tag: HMPREF0389_00293
EC number: 7.5.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018589953.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter ATP-binding protein
translation: MSMSILSLKNISKEFPGVKALDNVSLNAYAGEAMALMGENGAGKSTLIKILAGIYTRDTGSVFIDGKEVDIRTVKDSQRYKIAVIHQELNLIPNLTVAENIFIGREPVKKFNIVDKEKMIREAGKYLQELGVNISPESIVSDLSIAGQQMVEIAKAISENAEIIVMDEPTDALTDKEVETLFKVIRSLKKQNKAIIYISHRIGEIFEICEKTTILRDGQLIGEREISNLTENEVIQMMVGRSLTEQFPYIKVESKEIILEVEELSNEFFENLSFQLKKGEVLGIAGLVGSGRTELAKTIYGTYSAKRGNIRIQGKSIDCNKVFSGLEYGIAYVSEDRKKDGLVLSMSVKENMSLSSMKTFRTVFGVNKKKEVEYSEHFKKKMNIKTPSLEQKIKNLSGGNQQKVSIAKCLMTEPDVLILDEPTRGIDVGAKYEIYELINQMKKEQKGIIVISSEMPELLGISDRIIVMHEGLKKGELVRTEFSQEKIMQYILS
SIO_010081: HMPREF0389_RS01695
subclass of: SO_0000673
so part of: HMPREF0389_RS01695
location: complement(383139..384620)
location: region:383139-384620:-1
so has part: feature:383139-384620:-1:exon

WP_014262014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383139-384620:-1:exon

HMPREF0389_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rbsD
locus tag: HMPREF0389_RS01700
old locus tag: HMPREF0389_00292
so part of: sequence
location: complement(384630..385025)
location: region:384630-385025:-1
so has part: feature:384630-385025:-1:exon
subclass of: SO_0000010

position:384630:-1
position: 384630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385025:-1
position: 385025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384630-385025:-1:exon

HMPREF0389_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rbsD
locus tag: HMPREF0389_RS01700
old locus tag: HMPREF0389_00292
EC number: 5.4.99.62
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017353952.1
GO function: GO:0016872 - intramolecular lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-ribose pyranase
translation: MKKSELLNSDLSYEISKMGHTQTILIGDCGLPIPSGVKRIDLAVKRGVPSFADILETVLSELCVEKYIVAEELHFQNAAMEQYIKKTMGSIPSEVVSHEELKKMSEHVVCIVRTGEASPYANIILQSGVQF
SIO_010081: HMPREF0389_RS01700
subclass of: SO_0000673
so part of: HMPREF0389_RS01700
location: complement(384630..385025)
location: region:384630-385025:-1
so has part: feature:384630-385025:-1:exon

WP_014262015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384630-385025:-1:exon

HMPREF0389_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rbsK
locus tag: HMPREF0389_RS01705
old locus tag: HMPREF0389_00291
so part of: sequence
location: complement(385081..385980)
location: region:385081-385980:-1
so has part: feature:385081-385980:-1:exon
subclass of: SO_0000010

position:385081:-1
position: 385081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385980:-1
position: 385980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385081-385980:-1:exon

HMPREF0389_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rbsK
locus tag: HMPREF0389_RS01705
old locus tag: HMPREF0389_00291
EC number: 2.7.1.15
inference: COORDINATES: protein motif:HMM:TIGR02152.1
GO function: GO:0004747 - ribokinase activity [Evidence IEA]
GO process: GO:0019303 - D-ribose catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribokinase
translation: MICVVGSLNMDLVIDCQRIPSVGETVIGKQFHTIPGGKGANQAVACGRLGAETYMLGKVGNDGFADEVLTSLNESNVNTKWIQRCSEPTGVAIISVDEQGGNSIIVAMGANNTVSKEYIVSMKDVLEKSNIIILQHEIPLTTVEYIIDCYAGKRKTIVLNPAPAMEVSDHVLSKIDFLIPNEHEIKKISSGISSDLEGYEPYIQYYLDKGVKNIIITLGDEGCLHATQKENRKYPARKVAAVDTTAAGDTFVGAFCAEYERGLNVEQAISFATIASSVSVTRKGAQTSIPYLYEIEEML
SIO_010081: HMPREF0389_RS01705
subclass of: SO_0000673
so part of: HMPREF0389_RS01705
location: complement(385081..385980)
location: region:385081-385980:-1
so has part: feature:385081-385980:-1:exon

WP_014262016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385081-385980:-1:exon

HMPREF0389_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01710
old locus tag: HMPREF0389_00290
so part of: sequence
location: complement(386032..387027)
location: region:386032-387027:-1
so has part: feature:386032-387027:-1:exon
subclass of: SO_0000010

position:386032:-1
position: 386032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387027:-1
position: 387027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386032-387027:-1:exon

HMPREF0389_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01710
old locus tag: HMPREF0389_00290
inference: COORDINATES: protein motif:HMM:NF012742.2
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LacI family DNA-binding transcriptional regulator
translation: MRKTIRDIAKLSNVSIATVSKIINGKDSNISDATRRRVKKIMKEQNYTPNPIARTLVTKRSDTLGIIVPDIGNPFFSQLIRAVEDFSNSRGYHLIILDTDDDIEKQKTCLQIMQKKMVDGIILVSSSFRFGESELLPFHSPVVLVDGNDEKRYFIGKVGIDNTYGGYIATKHLIEKGCKKIAFLSGGKHSGSTKERYVGYQKALKENNIPSSDGVCLFGKFTSEFGYEATKKMLENRLEVDGIFAGSDLIALGVMKALEEYEFSVPDKIKLIGFDDIYVSRYLSPALTTIRQPIYDIGKLASEMLIEYIENGKIEENTLLLDTELIERETT
SIO_010081: HMPREF0389_RS01710
subclass of: SO_0000673
so part of: HMPREF0389_RS01710
location: complement(386032..387027)
location: region:386032-387027:-1
so has part: feature:386032-387027:-1:exon

WP_014262017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386032-387027:-1:exon

HMPREF0389_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01715
old locus tag: HMPREF0389_00289
so part of: sequence
location: complement(387112..388428)
location: region:387112-388428:-1
so has part: feature:387112-388428:-1:exon
subclass of: SO_0000010

position:387112:-1
position: 387112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388428:-1
position: 388428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387112-388428:-1:exon

HMPREF0389_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01715
old locus tag: HMPREF0389_00289
EC number: 6.3.2.-
inference: COORDINATES: protein motif:HMM:TIGR01499.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008841 - dihydrofolate synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004326 - tetrahydrofolylpolyglutamate synthase activity [Evidence IEA]
GO process: GO:0006730 - one-carbon metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: folylpolyglutamate synthase/dihydrofolate synthase family protein
translation: MRFEEAEQYIWNRPKFSRKLGLHRVEYILNHFSNPHLKLQIIHVAGTNGKGSVSTYIAGVLMEMGYNVGVYTSPHLLKLNERILLNSIPIDDNQVCRYVEKLIPVEKEMMDHCGECLSEFEVLTIIALLHYSFENPDFVILEVGLGGRLDATNVCNPILSIITSISLDHQQFLGDTLEKIATEKSGIIKENVPLVVGKQKDDIVIKTILKKAVESDAKVYFVEEASIVGIGLHGMCVDVKTPFCTKYYHLESSMIGLYQSENIAISVSVIELLYREGYISNPKNRISSGIKKSFIPGRMQVIDENPIVIVDGAHNEMGLFQLKETVKLFLKKKIISGVIFVTGMMKDKVVKKQIKELSDLSENTIFVSLDMQRAMTQKELKEFYFDQNKNSYFEESLEQGVDIARKIALDKNMAVVVAGSLYLVAEVIALYMKDSHEK
SIO_010081: HMPREF0389_RS01715
subclass of: SO_0000673
so part of: HMPREF0389_RS01715
location: complement(387112..388428)
location: region:387112-388428:-1
so has part: feature:387112-388428:-1:exon

WP_014262018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:387112-388428:-1:exon

HMPREF0389_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01720
old locus tag: HMPREF0389_00288
so part of: sequence
location: complement(388514..388867)
location: region:388514-388867:-1
so has part: feature:388514-388867:-1:exon
subclass of: SO_0000010

position:388514:-1
position: 388514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388867:-1
position: 388867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388514-388867:-1:exon

HMPREF0389_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01720
old locus tag: HMPREF0389_00288
inference: COORDINATES: protein motif:HMM:NF015953.2
GO component: GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage holin family protein
translation: MRENGFFSRAIIYAIILYVISTLMDSVSIDGIGSALFGGIILAILNTLIKPVLQILSLPITIATLGIFSLVVNGVVLSIAAFLTPKFTIDGLWSAILASILFSILNLFITRSGRRDY
SIO_010081: HMPREF0389_RS01720
subclass of: SO_0000673
so part of: HMPREF0389_RS01720
location: complement(388514..388867)
location: region:388514-388867:-1
so has part: feature:388514-388867:-1:exon

WP_014262019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388514-388867:-1:exon

HMPREF0389_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: thiI
locus tag: HMPREF0389_RS01725
old locus tag: HMPREF0389_00287
so part of: sequence
location: complement(388914..390101)
location: region:388914-390101:-1
so has part: feature:388914-390101:-1:exon
subclass of: SO_0000010

position:388914:-1
position: 388914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390101:-1
position: 390101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388914-390101:-1:exon

HMPREF0389_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: thiI
locus tag: HMPREF0389_RS01725
old locus tag: HMPREF0389_00287
EC number: 2.8.1.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013361657.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA uracil 4-sulfurtransferase ThiI
translation: MYNSIVIRNGEVAIKGANRPIFEKKLIKNLKRALYGIEGYHVYKADGRTYIDFEENIQSEILNRIKNVFGVVSYSPVIKTEPGYEPAKKTALELYDYFVENNNCKTFRVSVKRQDKTLPMKSPDMARDIAGFLLSSGKKPLEVDMSHPELHIHVELRKSGNVVYAEKFDGVGGMPVGVGGKAMVLLSGGIDSPVASYLIAKRGLQIEAVHFHSFPFTSERSKEKIEQLAKQLSLYTEGIRIHMVNLLPIQTKIAEKCPEELMTILSRRFMMRIAEKIALDRNCGGLVTGESIGQVASQTVEGLQSTNAVVKTIPVFRPLISFDKEDIIEVAKKIGTFDISIIPEEDCCTVFLPKHPVTKPKLSKVEKAEEVLDVEDMLNEAISLVEVREVGMLQW
SIO_010081: HMPREF0389_RS01725
subclass of: SO_0000673
so part of: HMPREF0389_RS01725
location: complement(388914..390101)
location: region:388914-390101:-1
so has part: feature:388914-390101:-1:exon

WP_014262020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388914-390101:-1:exon

HMPREF0389_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01730
old locus tag: HMPREF0389_00286
so part of: sequence
location: complement(390094..391251)
location: region:390094-391251:-1
so has part: feature:390094-391251:-1:exon
subclass of: SO_0000010

position:390094:-1
position: 390094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391251:-1
position: 391251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390094-391251:-1:exon

HMPREF0389_RS01730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01730
old locus tag: HMPREF0389_00286
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009902136.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine desulfurase family protein
translation: MEIYLDNSATTKPYPKVCESMVRAMEEDYYNPSSIYRDGVLVQKKIERYREYIANTLKCSSKEILFTSGGTESINTAIFSVKKSKKKHIITSMIEHPATLQAMKKMEELGFDVTYIKPLKNGCVTADEVLKFITENTCLVSLMAVNNELGSKTDVVKIATQVKKTNPNIIVHIDAVQAYLKLKLFVNENVIDFLSASGHKIHGPKGIGILYHRNGVKLSPHIVGGGQEMNFRSGTENVPGIFGLGTAVEEFYPHMDDKIKYIQTVKEYLKDNLVKKIPYIKILSPQDSVCHILNVSFLGVRGEVLLHSLESEGICVSTGSACSSKKAGSYVLGALEFTKQEKDGAIRFSLSEYNTIEEVDIVVKALEKNVNMIRTVMNFGKGRHV
SIO_010081: HMPREF0389_RS01730
subclass of: SO_0000673
so part of: HMPREF0389_RS01730
location: complement(390094..391251)
location: region:390094-391251:-1
so has part: feature:390094-391251:-1:exon

WP_014262021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390094-391251:-1:exon

HMPREF0389_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01735
old locus tag: HMPREF0389_00285
so part of: sequence
location: complement(391331..391846)
location: region:391331-391846:-1
so has part: feature:391331-391846:-1:exon
subclass of: SO_0000010

position:391331:-1
position: 391331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391846:-1
position: 391846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391331-391846:-1:exon

HMPREF0389_RS01735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01735
old locus tag: HMPREF0389_00285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013360821.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Gx transporter family protein
translation: MQGTKRIVFLGLMISYSLVLHLIENILPGLHFIAPGAKLGLANIITLYLLYRTSKKDAFLVLVLRILLGSFFGGSLSALLYSLFGGIFSFIAMALTRKLERFQVGILGVSVVGALSFNIGQLIVAGLVIQNMSIAVYFPIMAYVSLGTGTFIGFVVCFLTDRSNYRESMGA
SIO_010081: HMPREF0389_RS01735
subclass of: SO_0000673
so part of: HMPREF0389_RS01735
location: complement(391331..391846)
location: region:391331-391846:-1
so has part: feature:391331-391846:-1:exon

WP_014262022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391331-391846:-1:exon

HMPREF0389_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01740
old locus tag: HMPREF0389_00284
so part of: sequence
location: complement(391879..392262)
location: region:391879-392262:-1
so has part: feature:391879-392262:-1:exon
subclass of: SO_0000010

position:391879:-1
position: 391879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392262:-1
position: 392262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391879-392262:-1:exon

HMPREF0389_RS01740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01740
old locus tag: HMPREF0389_00284
inference: COORDINATES: protein motif:HMM:NF018685.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NusG domain II-containing protein
translation: MIKKGDIIIICIIFILACIGMYFTNVEKETSMKIIEVFHDGKIVASYKVDCNFDKKFDFFDGKGGHEVYWIHDGGVEVIESNTPHKICMKMGFINRGGQMIVALPHKMYIRIISSSGQSSDLDAVVE
SIO_010081: HMPREF0389_RS01740
subclass of: SO_0000673
so part of: HMPREF0389_RS01740
location: complement(391879..392262)
location: region:391879-392262:-1
so has part: feature:391879-392262:-1:exon

WP_014262023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391879-392262:-1:exon

HMPREF0389_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01745
old locus tag: HMPREF0389_00283
so part of: sequence
location: complement(392346..393962)
location: region:392346-393962:-1
so has part: feature:392346-393962:-1:exon
subclass of: SO_0000010

position:392346:-1
position: 392346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393962:-1
position: 393962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392346-393962:-1:exon

HMPREF0389_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01745
old locus tag: HMPREF0389_00283
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013360819.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0005436 - sodium:phosphate symporter activity [Evidence IEA]
GO process: GO:0044341 - sodium-dependent phosphate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Na/Pi cotransporter family protein
translation: MVLEIVPMLFAGLGMFLYGMSLMGEGLQKTAGEKMKHIIGLLTKNRFISVLVGLFVTGIIQSSSATTVMVVGFVNAGLMNLNQAIGIIMGANVGTTVTAQLVSFNLEALAPISIGIGVLWMTIKKTNKAKNIAEILIGFGILFVGMNFMKSAMAPLRDCESFRNLLIFFGHNTFLGILMGFVLTLVLQSSSASIGILLALASQGLLPLSSALPILYGDNIGTCTTALISSIGASKNAQRAAIMHLVFNIIGTILFCFVLSYPIMKIVVSMNPNSVSRQIANAHSFFNIINVIVQFPFAGFIVMFAQKIVPETEAEKQQVAYMTRLDDRMLETPSIALDNTISECLNMGYMAKESVESALDGFVNKNEASIKKAFDLEKLINRKERELVAYLIKLSNQTISEHDRVIVDSLFNVVNDIERVGDHAENIAELAVLVIERELDFSEEALNDIAVIREHVIRSLDVALKARETGDLKLVEETSQVETQVDIIEKNCRTSHIARLNKNVCYPESGIMFLDLCSNMERVSDHALNIANSILDEK
SIO_010081: HMPREF0389_RS01745
subclass of: SO_0000673
so part of: HMPREF0389_RS01745
location: complement(392346..393962)
location: region:392346-393962:-1
so has part: feature:392346-393962:-1:exon

WP_014262024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392346-393962:-1:exon

HMPREF0389_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01750
old locus tag: HMPREF0389_00282
so part of: sequence
location: complement(393996..394301)
location: region:393996-394301:-1
so has part: feature:393996-394301:-1:exon
subclass of: SO_0000010

position:393996:-1
position: 393996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394301:-1
position: 394301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393996-394301:-1:exon

HMPREF0389_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01750
old locus tag: HMPREF0389_00282
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNYIVLEDFVPYENAFLFHIFKNNDRIELNHPHTTIMVWIHKTDIGYSDKGVRNRLRMEIQKDDLNLKRDFFLLKSILAQEVMDFLEFDFDVKDVLCCIS
SIO_010081: HMPREF0389_RS01750
subclass of: SO_0000673
so part of: HMPREF0389_RS01750
location: complement(393996..394301)
location: region:393996-394301:-1
so has part: feature:393996-394301:-1:exon

WP_014262025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393996-394301:-1:exon

HMPREF0389_RS08685
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS08685
old locus tag: HMPREF0389_00281
so part of: sequence
location: complement(394323..395066)
location: region:394323-395066:-1
so has part: feature:394323-395066:-1:exon
subclass of: SO_0000010

position:394323:-1
position: 394323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395066:-1
position: 395066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394323-395066:-1:exon

HMPREF0389_RS08685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS08685
old locus tag: HMPREF0389_00281
inference: COORDINATES: protein motif:HMM:NF017734.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF881 domain-containing protein
translation: MQNKLGRNLFQFHNILTHIKYGKTYIFVMATLVGVLVGMQINSAANTSRELSYPVRKITNQINQEKYEIKHLKREVFHAEHQKRKLERDRVGESQSYLELKKRVTYLKMISGESRISGEGVILIIDSGKDENIALKMENKKILLLLINELRLNGAETISINGQQITNLSGITLAGTHLDINNTEIGPEYEVKIIGDSEKLYRFLDKKSVTVMFMKKVYQFHVSVKKVPSIEIVETRISKPIPQITSR
SIO_010081: HMPREF0389_RS08685
subclass of: SO_0000673
so part of: HMPREF0389_RS08685
location: complement(394323..395066)
location: region:394323-395066:-1
so has part: feature:394323-395066:-1:exon

WP_169308502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394323-395066:-1:exon

HMPREF0389_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: yihA
locus tag: HMPREF0389_RS01760
old locus tag: HMPREF0389_00280
so part of: sequence
location: complement(395127..395738)
location: region:395127-395738:-1
so has part: feature:395127-395738:-1:exon
subclass of: SO_0000010

position:395127:-1
position: 395127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395738:-1
position: 395738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395127-395738:-1:exon

HMPREF0389_RS01760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: yihA
locus tag: HMPREF0389_RS01760
old locus tag: HMPREF0389_00280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009891775.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome biogenesis GTP-binding protein YihA/YsxC
translation: MKIKSVEMNLSATSPKHYPKDDFLQVAFVGRSNVGKSSAINTLLNRKSIARVSQSPGKTRTINFYSVNEQFYFVDLPGYGYAKLSKEEQEGWGKMMERYFIESPNLIHLFLLVDIRHEPKDSDVQMYQFAHHWNIPITVIATKSDKINRSQLQKNISVIRKKLNLLSGEDVFMISSLKKTGKEEIWSKIIDIFAENGVQIDEE
SIO_010081: HMPREF0389_RS01760
subclass of: SO_0000673
so part of: HMPREF0389_RS01760
location: complement(395127..395738)
location: region:395127-395738:-1
so has part: feature:395127-395738:-1:exon

WP_014262027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395127-395738:-1:exon

HMPREF0389_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: lon
locus tag: HMPREF0389_RS01765
old locus tag: HMPREF0389_00279
so part of: sequence
location: complement(395807..398128)
location: region:395807-398128:-1
so has part: feature:395807-398128:-1:exon
subclass of: SO_0000010

position:395807:-1
position: 395807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398128:-1
position: 398128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395807-398128:-1:exon

HMPREF0389_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: lon
locus tag: HMPREF0389_RS01765
old locus tag: HMPREF0389_00279
EC number: 3.4.21.53
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013360812.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endopeptidase La
translation: MGRRSKKMKLPVIMLRGMSVFPSTISHFDIGRERSIAAIEKAMEEDQIVFLVSQKRADIDLPTEDDVFRIGTISRVKQMLRLPGNTVKVLVEGQQRARILNFEEDEPCFIANVERLPEDLHEITQEEEALRRVVFELFERYVQLENRISPEVLLGLEELDDISIFSDLIISYLYLKPLLKQELLEEYLPFERLKLLHVVLLNELEILEIELKIEEEVKNQINHFQKEYYLREQVKAIQKELGEESISDEAEEYAEKLENLEVSDFVREKIQKEIKRYAKLPSMSAESSVLRSYLEMVFDLPWNNRTEDSMNIEKAEHILNEEHYGLLKVKERILEFLAVRQLSTSLKAPIICLVGPPGVGKTSIARSVAHALNREFVRVSLGGVRDEAEIRGHRRTYIGAIPGRVMSSIKDVKVNNPVFLFDEIDKMASDFRGDPASAMLEVLDPEQNKEFTDHYLELPFDLSKVLFITTANSISGIPRPLLDRMELIEVSGYTEEEKICIAQDFLIPKVCKENGLSPKYLKMNEDTLRCVIGGYTRESGVRGLEREIGKLCRKCAVEKVKNSKKRSVTVSLKNIESYLGKIKFRHDVADEEAQIGSVNGMAWTQVGGETLNIEVVCLKGTGKLELTGKLGDVMKESAKAGHSYLRMIAEEYGIESDFYKNFDLHIHIPEGAIPKDGPSAGISMTTAMLSAVAKIPVKPRISMTGEITLRGKVLAVGGIKEKVLAAYRANVREIILPFDNQKDVEEIPVHVREGICFHFVKEMKEVLDIALLQ
SIO_010081: HMPREF0389_RS01765
subclass of: SO_0000673
so part of: HMPREF0389_RS01765
location: complement(395807..398128)
location: region:395807-398128:-1
so has part: feature:395807-398128:-1:exon

WP_014262028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395807-398128:-1:exon

HMPREF0389_RS01770
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01770
so part of: sequence
location: 399022..399321
location: region:399022-399321:1
so has part: feature:399022-399321:1:exon
subclass of: SO_0000010

position:399022:1
position: 399022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399321:1
position: 399321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399022-399321:1:exon

HMPREF0389_RS01770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01770
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIQSVVLVFFSFSILFAFINLLYIIATAMEIPQSTYVKSKKTESYEYVTRQRKNRHTPQPSNTYSAFTTKKVKQTVTHPRSYKKYVKQGSNSNKIKNRY
SIO_010081: HMPREF0389_RS01770
subclass of: SO_0000673
so part of: HMPREF0389_RS01770
location: 399022..399321
location: region:399022-399321:1
so has part: feature:399022-399321:1:exon

WP_041250749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399022-399321:1:exon

HMPREF0389_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01775
old locus tag: HMPREF0389_00276
so part of: sequence
location: complement(399452..401086)
location: region:399452-401086:-1
so has part: feature:399452-401086:-1:exon
subclass of: SO_0000010

position:399452:-1
position: 399452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401086:-1
position: 401086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399452-401086:-1:exon

HMPREF0389_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01775
old locus tag: HMPREF0389_00276
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013360701.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide biosynthesis protein
translation: MENQTIQGSFIKGAAILGIAGIIVKVLGAIFKIPLVSIIASTGMGYYSSAYPIYVMLLAIATSGFPIAISKMVAERRAKGNLKGANEIFYVILPLMVVIGIITSSGLFLSSDFLARNMLENPKAVYSLKALSLALFFVPIMSAYRGFFQGRNTMFPSAISQLMEQMGRVILGLTLALIMVKKGVEYGAAGASFGATGGAFLGLLAMIWFYLREKKTLNSESQVEDCYEKEHSVRIVKELLIIAIPVIIGALVKPIMDFIDASMVIGLLMKTGVGELEANSMLGQLSGMATTMVNLPSIMISAIAMSIVPIISYEYSRNNIESAERNVVLSIRMALLIGLPTGIGLMSLSEPIMNLLFPKEPSQLAGQILFIAALGVVFLSLIQVLTAILQGVGKAHLPVLNLMIGVVFKVIITYLLTTNERFGVKGAAIGTVVAYVISAFLDFIAVKKFLMLEFDYKKILVRPIVVTLLMGFIARISYKVASIAFSVAISVSAANKFATMIGIVFAGIFYIVALIKCKIIEEDDLRNLSKGQKIISLFKKLKIV
SIO_010081: HMPREF0389_RS01775
subclass of: SO_0000673
so part of: HMPREF0389_RS01775
location: complement(399452..401086)
location: region:399452-401086:-1
so has part: feature:399452-401086:-1:exon

WP_014262029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399452-401086:-1:exon

HMPREF0389_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01780
old locus tag: HMPREF0389_00275
so part of: sequence
location: complement(401295..402392)
location: region:401295-402392:-1
so has part: feature:401295-402392:-1:exon
subclass of: SO_0000010

position:401295:-1
position: 401295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402392:-1
position: 402392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401295-402392:-1:exon

HMPREF0389_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01780
old locus tag: HMPREF0389_00275
EC number: 5.2.1.8
inference: COORDINATES: protein motif:HMM:NF025010.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidylprolyl isomerase
translation: MKKWNKVIASVVSATLLFAGCSIGGDAVASVNGQKIGKDVYEKTLGLYSPSYEMQFGPDIWNTEIESGVTFSQKFQEEILEKMINDEIILQDAAKKELTVSVEEINTQFDELKKSIDSQEQFKSILESNGIDDEFLKEQVKKDMTVKKYYDTLMQENEVKEDEVRKYYDEHIDEFTSSQVKASHILFAKKDFDKNEELSKEEVAKKKELAEKVLGMAKNGQNFADLAMKYSDDTGSAKNGGDLGYFDKNTMVKEFSDAAFSMKQGDISDSIVETEFGFHIIKLFDKKENVEKFEDVKQSIASNLQYQKYESVIDGLKKAAKVKKNEDVIKKVREEFGKKQEEKAKKTDENSETETTEQTDTETKK
SIO_010081: HMPREF0389_RS01780
subclass of: SO_0000673
so part of: HMPREF0389_RS01780
location: complement(401295..402392)
location: region:401295-402392:-1
so has part: feature:401295-402392:-1:exon

WP_014262030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401295-402392:-1:exon

HMPREF0389_RS01785
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: mfd
locus tag: HMPREF0389_RS01785
old locus tag: HMPREF0389_00274
so part of: sequence
location: complement(402473..405847)
location: region:402473-405847:-1
so has part: feature:402473-405847:-1:exon
subclass of: SO_0000010

position:402473:-1
position: 402473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405847:-1
position: 405847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402473-405847:-1:exon

HMPREF0389_RS01785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: mfd
locus tag: HMPREF0389_RS01785
old locus tag: HMPREF0389_00274
inference: COORDINATES: protein motif:HMM:TIGR00580.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription-repair coupling factor
translation: MKQLVKNLEFLAPFLKIDTAISKGQFPISVDGFLTEQRILHTAYLVEKLRKKIVFVVSSKKEVNDCKEAFEKMNLNVVTIDTESIRFYHIDAKDHEKDSENIRTMASLLYGEYDILLVSGEELNRKYMPPKRFKESIYSVSLGQICDREELCHKLVSLGYTREYKVEGVGQFSIRGGIVDIYSPSMTNPYRIEFFDDEIDSIRTFDVFSQKSLENEKRAVIYPAASLLYPDSVEFKIPHEEDLNDPLSDEVRMLNDSVYFEGMEKYVDLLYGKESVSLLEYCDEDILVIMVDSNRVLERIENIQDEFSESFKISLEKRETLKSCGNLLWGTAVVERQLSDRALLLHSYFPKKLTYFKPKALVHSDTRSSIQFQGRLNEFVEELLYLIKEDYIIFILDCNENSFSNIYQKLLDSGIHPILLQERTTYFENGAVVMHSCYLEKGFLFTDAKVAFYTGNDIFQNRKKKQSRKIGKKYDSKKIENFIQLKKGDYVVHETYGVGQFIEIEQREFDGIKKDYIKIAYFGGDSLYVPLEQMDKVQSFIGNSAEQAYKLSKLGSSDWKKSKARTKKAVEAIAQDLVELYAVRENEKGYSFQEDTVWQREFEDAFPYEETDDQLKAIEEVKRDMESSRVMDRLLCGDVGYGKTEVAIRAIFKACMDGKQVVFLVPTTILAQQHYVTIKERFLNYPLRVDLVSRFKTTKEVNETFDSLAKGSVDVVIGTHKILSEKIKYKNLGLIVVDEEQRFGVKQKEAIKKMRMNIDCLTLSATPIPRTLHLSLSGIREMSILNEPPQDRHPIVTYVTEAKSNIIADAIDRELARGGQVFFVYNRVETIDKIHTLLKELVPDADIAVAHGQMPSRKLEQIMVDFLNREYDVLVCTTIIETGMDISNANTMIVYDADKMGLSQLYQLRGRVGRSSKQGYAYFMYEKEKVLTEIAEKRLKTIREFTEFGSGFKVAMKDLEIRGAGNLLGESQSGHIANIGYDLYVRMLDEAIKKYKGELPVTDVETEIQLKLNGYIPNYYVEDEIEKIDIYKKIAMIDKKEDYEDLMDELCDRFGEIPISVVTLLDVSYLRALGKKGKVTKIYQKNFMVYFVGKDNKLITKKAFPQKDSSKLVKNIIDFLEIVV
SIO_010081: HMPREF0389_RS01785
subclass of: SO_0000673
so part of: HMPREF0389_RS01785
location: complement(402473..405847)
location: region:402473-405847:-1
so has part: feature:402473-405847:-1:exon

WP_014262031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402473-405847:-1:exon

HMPREF0389_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: pth
locus tag: HMPREF0389_RS01790
old locus tag: HMPREF0389_00273
so part of: sequence
location: complement(405859..406419)
location: region:405859-406419:-1
so has part: feature:405859-406419:-1:exon
subclass of: SO_0000010

position:405859:-1
position: 405859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406419:-1
position: 406419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405859-406419:-1:exon

HMPREF0389_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: pth
locus tag: HMPREF0389_RS01790
old locus tag: HMPREF0389_00273
EC number: 3.1.1.29
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003421426.1
GO function: GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminoacyl-tRNA hydrolase
translation: MYIIVGLGNPGKKYERTRHNIGFLTIDELSRRTGIIPNKLKFKASVGEGRIGTEKVVLVKPQTFMNLSGESVRELMSFYKVDHDKLIVIYDDIDLEVGKLRIRKKGSSGTHNGMRNIIYLLGYDDFPRFRVGISGENRRGNLADYVLGNFLKEEIPSVADSIERCADAIECLMKDGIELAMTRYNG
SIO_010081: HMPREF0389_RS01790
subclass of: SO_0000673
so part of: HMPREF0389_RS01790
location: complement(405859..406419)
location: region:405859-406419:-1
so has part: feature:405859-406419:-1:exon

WP_014262032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405859-406419:-1:exon

HMPREF0389_RS01795
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01795
old locus tag: HMPREF0389_00272
so part of: sequence
location: complement(406478..406891)
location: region:406478-406891:-1
so has part: feature:406478-406891:-1:exon
subclass of: SO_0000010

position:406478:-1
position: 406478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406891:-1
position: 406891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406478-406891:-1:exon

HMPREF0389_RS01795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01795
old locus tag: HMPREF0389_00272
inference: COORDINATES: protein motif:HMM:NF012843.2
GO function: GO:0004525 - ribonuclease III activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease III domain-containing protein
translation: MEENRLEKELFPLHSVNPIVLAFMGDCVYEFAIRDYVIRKFPTMKIHAVHRKAVSFAKASSQANVVQKLHEMDFLTEEEWSWVKKGRNQHSMIPKNASPMEYRYATGFETLLGYLHFVNQQDRIRLIVEEAIKIVGV
SIO_010081: HMPREF0389_RS01795
subclass of: SO_0000673
so part of: HMPREF0389_RS01795
location: complement(406478..406891)
location: region:406478-406891:-1
so has part: feature:406478-406891:-1:exon

WP_014262033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406478-406891:-1:exon

HMPREF0389_RS01800
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: cysS
locus tag: HMPREF0389_RS01800
old locus tag: HMPREF0389_00271
so part of: sequence
location: complement(406873..408273)
location: region:406873-408273:-1
so has part: feature:406873-408273:-1:exon
subclass of: SO_0000010

position:406873:-1
position: 406873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408273:-1
position: 408273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406873-408273:-1:exon

HMPREF0389_RS01800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: cysS
locus tag: HMPREF0389_RS01800
old locus tag: HMPREF0389_00271
EC number: 6.1.1.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013362450.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine--tRNA ligase
translation: MRFYNTLTRRKDEFVPIEKNKVKMYSCGPTVYNYFHIGNARPFIIFDTLRNYLEYRGYEVTFVQNFTDVDDKIINRANEEGISPLEVADKYIKEYFVDADGLGIRRASVHPRVTECIEDIIEFIEELIQKGHAYEIDGDVYYDTKSFDGYGKLSRQNMEELNAGARIDVDDRKKSPSDFALWKKKKEGEIGWISPWGEGRPGWHIECSVMSRKYLGDTIDIHSGGQDLIFPHHENEIAQSEGRSGKEFAHYWLHNGYININNQKMSKSLNNFFTVREISEVIDLEIVRFFLLSAQYRNPVNFSQDLLDAAKSGMERLYNTKHKVEFLLEQAQGMIKEDEKEFVSKLPSYRELFIEAMDDDLNTADGISAIFELSKFINTTVSEKSSKEYLQECMNIFCELTNVLNIIQKKKSDGFDEDKINELIEQRSLAKKEKNFAEADRIRGQLHDMGVEVLDTRQGTTWKKID
SIO_010081: HMPREF0389_RS01800
subclass of: SO_0000673
so part of: HMPREF0389_RS01800
location: complement(406873..408273)
location: region:406873-408273:-1
so has part: feature:406873-408273:-1:exon

WP_014262034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406873-408273:-1:exon

HMPREF0389_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: mnmA
locus tag: HMPREF0389_RS01805
old locus tag: HMPREF0389_00270
so part of: sequence
location: complement(408374..409501)
location: region:408374-409501:-1
so has part: feature:408374-409501:-1:exon
subclass of: SO_0000010

position:408374:-1
position: 408374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409501:-1
position: 409501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408374-409501:-1:exon

HMPREF0389_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: mnmA
locus tag: HMPREF0389_RS01805
old locus tag: HMPREF0389_00270
EC number: 2.8.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005367704.1
GO function: GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA 2-thiouridine(34) synthase MnmA
translation: MEYIVAKKVILGMSGGVDSSVSALLLKQQGYEVVGLFMKNWDEKDEGGVCTATQDYEDVMRVAGQLEIPFYTVNFEKEYWDRVFSYFLNEYEHGRTPNPDVMCNQEIKFNAFLDYALKLEADYIAMGHYAGVLKKNGRYYLRRGKDANKDQSYFLSRITEEALSKTIFPIADLEKSEVRELAEKYRLYTATKKDSTGVCFIGERNFDKFLDQFLKTNPGLILTVDGKKIGEHTGLIHYTIGQRKGIGIGGVGSGEPWFVAGKDLKKNILYVAQGEQHPSLYTTELLGEDVVWITEKPQFPFRGTAKFRYRQKDIPVTVYEHQDEGVRVVYDEPVRSITPGQFAVFYDGEICLGSAIITKGKPLNMKYEYLHDVVK
SIO_010081: HMPREF0389_RS01805
subclass of: SO_0000673
so part of: HMPREF0389_RS01805
location: complement(408374..409501)
location: region:408374-409501:-1
so has part: feature:408374-409501:-1:exon

WP_174254345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408374-409501:-1:exon

HMPREF0389_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: alaS
locus tag: HMPREF0389_RS01810
old locus tag: HMPREF0389_00269
so part of: sequence
location: complement(409564..412209)
location: region:409564-412209:-1
so has part: feature:409564-412209:-1:exon
subclass of: SO_0000010

position:409564:-1
position: 409564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412209:-1
position: 412209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409564-412209:-1:exon

HMPREF0389_RS01810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: alaS
locus tag: HMPREF0389_RS01810
old locus tag: HMPREF0389_00269
EC number: 6.1.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012159518.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine--tRNA ligase
translation: MKLKFKSVNEIRKSYLDFFASKDHYVSPSFPLVPINDNSLLLINAGMAPLKNYFMGIEKPPKNRMSTCQKCIRTGDIENVGITARHATFFEMLGNFSFGNYFKNEAIAWAWEFVTTVLEISPELLWVTVYEEDDEAYNIWRDKIGVSEDRIVRLGKEDNFWEIGTGTGPCGPCSEIYIDRGAEFGCDDEHCKPGCDCDRFLEFWNLVFTQFNKEEDKTLTPLPHPNIDTGMGLERVACMLQGVDSIFDIDTMQDIIRKIEELLHVKYREDSKKDISIRIITDHIRAVTFLIGDGVIPSNEGRGYVLRRLLRRAARHGKLLGMDRPFLHELMSKVIEINADAYPELKEKQEYIYKVIKVEEDKFEETIYQGLEILREEMNRMKDTNETMMSPEKAFRLYDTFGFPFDLTKEILTEEGFSVEEEGFYEEMEKQRNRARSARKDSDNEGWKKENISLDLEPTVFEGYTSFTEEASIISIVQEDALIQTAKKGDKAIFILNRTPFYAESGGQVGDIGILESQRGKVSVIQTKKGNNDVIMHIGEVIEGEISVGDSMIAEINESRRNETMRNHSATHLLHKALRTVLGNHVTQAGSFVTPERVRFDFTHFEAMTKEELQKVELAVNGAIYSYLEVTCQEMAIEKAKEKGAMALFGEKYGQTVRVVSMGDYSVELCGGTHVSNTSEIGMFKIVSESGVASGVRRIEAVTGMKVYEVLKKQEGLLEDLSEKMKTKQDQLSERVEHQIVELKEAKKEIAQLKNTILQENMDNIMSHCIDVSDLKLLTNEFENVDSDDLRNIAQSLVDKDDTLVVVLASKKDEKINFIAMAGKNAVEKGAHCGNLLREVAKIAKGGGGGKANMAQAGGKDVSKIKDALNVAKDVLIAQLL
SIO_010081: HMPREF0389_RS01810
subclass of: SO_0000673
so part of: HMPREF0389_RS01810
location: complement(409564..412209)
location: region:409564-412209:-1
so has part: feature:409564-412209:-1:exon

WP_014262036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409564-412209:-1:exon

misc_binding
type: Miscellaneous Binding Site
subclass of: SO_0000409
RO_0002162: 546269
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00230
inference: COORDINATES: profile:INFERNAL:1.1.4
note: T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: tRNA
so part of: sequence
location: complement(412410..412627)
location: region:412410-412627:-1
so has part: feature:412410-412627:-1:region

position:412410:-1
position: 412410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412627:-1
position: 412627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412410-412627:-1:region

HMPREF0389_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01820
old locus tag: HMPREF0389_00268
so part of: sequence
location: complement(413323..413700)
location: region:413323-413700:-1
so has part: feature:413323-413700:-1:exon
subclass of: SO_0000010

position:413323:-1
position: 413323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413700:-1
position: 413700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413323-413700:-1:exon

HMPREF0389_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01820
old locus tag: HMPREF0389_00268
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262045.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNKVIHFVDILTVIILMIILQSEIVFIKGNCLYVQNSPWYDYMWMYSISGISDMIRRSSYDFIYNLLVFIVYISSFYVITVKLIDLWKKELISGTYRWFIVINICFVIFKTVDFLIELDAAFSI
SIO_010081: HMPREF0389_RS01820
subclass of: SO_0000673
so part of: HMPREF0389_RS01820
location: complement(413323..413700)
location: region:413323-413700:-1
so has part: feature:413323-413700:-1:exon

WP_014262037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:413323-413700:-1:exon

HMPREF0389_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01830
old locus tag: HMPREF0389_00267
so part of: sequence
location: complement(414088..414708)
location: region:414088-414708:-1
so has part: feature:414088-414708:-1:exon
subclass of: SO_0000010

position:414088:-1
position: 414088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414708:-1
position: 414708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414088-414708:-1:exon

HMPREF0389_RS01830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01830
old locus tag: HMPREF0389_00267
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262040.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTKGKFREDYWKKDWDKYRDEYCSKFNSYVKHSGSVTEKVHYFRNNLNRIPTTLQQLNSQSSNWVLLKVGSSGYHMCPTSFSETGSYNLKFISKNGRNEGVYINYYGSNNKNKNKGKACTEKTDPKNMGTYNFSGMYYAKGKISTDGASHWLYDIRPYDNYGNVSRNDLPRDGEKHGDNEKRYEKNLDALRARIRFVGEWKGVVE
SIO_010081: HMPREF0389_RS01830
subclass of: SO_0000673
so part of: HMPREF0389_RS01830
location: complement(414088..414708)
location: region:414088-414708:-1
so has part: feature:414088-414708:-1:exon

WP_014262038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414088-414708:-1:exon

HMPREF0389_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01840
old locus tag: HMPREF0389_00265
so part of: sequence
location: complement(415227..415847)
location: region:415227-415847:-1
so has part: feature:415227-415847:-1:exon
subclass of: SO_0000010

position:415227:-1
position: 415227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415847:-1
position: 415847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415227-415847:-1:exon

HMPREF0389_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01840
old locus tag: HMPREF0389_00265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262038.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDTKGKFREDYWKRDWDKYRDEYCSKFNSYVKRSGSVTEKVHYFRNNLNRIPTTLQQLNSQSSNWVLLKVGSSGYHMCPTSFSETGSYNLKFISKNGRNEGVYINYYGSNNKNKNKGKACTEKTDPKNMGTYNFSGMYYAKGKISTDGASHWLYDIHPYDNYGNVSKNDLPRDGEKRKDNETRYEYNVDVRRARIQFTREWKGIDE
SIO_010081: HMPREF0389_RS01840
subclass of: SO_0000673
so part of: HMPREF0389_RS01840
location: complement(415227..415847)
location: region:415227-415847:-1
so has part: feature:415227-415847:-1:exon

WP_014262040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415227-415847:-1:exon

HMPREF0389_RS09160
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS09160
old locus tag: HMPREF0389_00264
so part of: sequence
location: complement(416737..416946)
location: region:416737-416946:-1
so has part: feature:416737-416946:-1:exon
subclass of: SO_0000010

position:416737:-1
position: 416737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416946:-1
position: 416946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416737-416946:-1:exon

HMPREF0389_RS09160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS09160
old locus tag: HMPREF0389_00264
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKEKHPKKQKDHFELDMVPYYSYGNVSKNDLPNLFEQMSNSNANRYNDNYDAKNSRNKFEKQWKGIKE
SIO_010081: HMPREF0389_RS09160
subclass of: SO_0000673
so part of: HMPREF0389_RS09160
location: complement(416737..416946)
location: region:416737-416946:-1
so has part: feature:416737-416946:-1:exon

WP_041250753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416737-416946:-1:exon

HMPREF0389_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01855
old locus tag: HMPREF0389_00263
so part of: sequence
location: complement(416903..417355)
location: region:416903-417355:-1
so has part: feature:416903-417355:-1:exon
subclass of: SO_0000010

position:416903:-1
position: 416903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417355:-1
position: 417355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416903-417355:-1:exon

HMPREF0389_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01855
old locus tag: HMPREF0389_00263
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTKGKFREDYWKRDWDKYRDEYCSKFNSYVKHSGSVTEKVHYFRNNLNRIPTTLQQLNSQSSNWVLLQVGSFGYHMCPTTFSGTGSYNLKFISKNGRNEGVYINYYGDKNKNKGKACTEKTDPKNMGTYNFSGMYYAKGKASKEAKRSF
SIO_010081: HMPREF0389_RS01855
subclass of: SO_0000673
so part of: HMPREF0389_RS01855
location: complement(416903..417355)
location: region:416903-417355:-1
so has part: feature:416903-417355:-1:exon

WP_041250754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416903-417355:-1:exon

HMPREF0389_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01865
old locus tag: HMPREF0389_00262
so part of: sequence
location: complement(417867..418244)
location: region:417867-418244:-1
so has part: feature:417867-418244:-1:exon
subclass of: SO_0000010

position:417867:-1
position: 417867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418244:-1
position: 418244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417867-418244:-1:exon

HMPREF0389_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01865
old locus tag: HMPREF0389_00262
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262037.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNKVIHFVDILTVIILMIGLQSWIIFVKENFIYLQNYSWDSCILCYSVCGMLDMIRRSSYEYIYHGTVFVVYFASFYVIVVKLIDLWKKELIHRVYRWFIVINICFVVFKTLEFLIHLDREFGI
SIO_010081: HMPREF0389_RS01865
subclass of: SO_0000673
so part of: HMPREF0389_RS01865
location: complement(417867..418244)
location: region:417867-418244:-1
so has part: feature:417867-418244:-1:exon

WP_014262045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417867-418244:-1:exon

HMPREF0389_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01870
so part of: sequence
location: complement(418257..418634)
location: region:418257-418634:-1
so has part: feature:418257-418634:-1:exon
subclass of: SO_0000010

position:418257:-1
position: 418257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418634:-1
position: 418634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418257-418634:-1:exon

HMPREF0389_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01870
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRKIILAIDILTAILFAIQIQSTVVFIFEEYSYLQNYFWNEFFIFYRSYGLSSLGYSFQSELIYYQFLFIVFCLNLYVIVIKMICMYKKETMYGMYRALLFVNIAFICAKIVEFDMFWTAAMGI
SIO_010081: HMPREF0389_RS01870
subclass of: SO_0000673
so part of: HMPREF0389_RS01870
location: complement(418257..418634)
location: region:418257-418634:-1
so has part: feature:418257-418634:-1:exon

WP_041250755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418257-418634:-1:exon

HMPREF0389_RS09165
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS09165
old locus tag: HMPREF0389_00261
so part of: sequence
location: complement(418678..420489)
location: region:418678-420489:-1
so has part: feature:418678-420489:-1:exon
subclass of: SO_0000010

position:418678:-1
position: 418678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420489:-1
position: 420489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418678-420489:-1:exon

HMPREF0389_RS09165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS09165
old locus tag: HMPREF0389_00261
inference: COORDINATES: protein motif:HMM:NF021028.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: InlB B-repeat-containing protein
translation: MIYGWYKDSDRKYSFFNTKHDRTFGKRLVGWHWIDGYRYYFGNDGVLYQNTTTPDGSQVDKDGRYMKNSIIQHVGGKGLSLKPHMSEQAKKNSLQNQTQQAKSDNKAKKERESNHDSKQDKTYTVTFDLNDGIPSKKEMQSVKEGNYVEYLEPPYRDGYYFLAWYQEKEVQDFDNGFSFDGTPIHKDITLYALWLDTTHDSDSDGLLDGHEMILKTDPHKTDTDGDGLTDSEEHNFTTTDPLKTHTYLDDTADAELDIDGDGLTNLEEVRFGSNPIFGDYDEDYFNDKQEKEHGTNPNNKDTDNDGLKDGQEIIQRTDKKGRVFFKLHSYPNKRDSDGDGIEDKQDEKPLIPQRYTIDYLGSSKHLKSVEERLNQKIKKNSSSLSNGEKVSTIGRWGTEILMNDYDTFLKERKVDTKGKFREDYWKKDWDKYRDEYCSKFNSYVKRSGSVTEKVHYFRNNLNRIPTTLQQLNSQSSNWVLLKVGSFGYHMCSTSFSETGSYNLKFISKNGRNEGVYINHYGSNNKNKNKGKACTEKTDPKNMGTYNFSGMYYAKGKASKEAKDHFQLDMLPYYNYGNVSRNDLPGDEETNDKNKGRYKKIMMH
SIO_010081: HMPREF0389_RS09165
subclass of: SO_0000673
so part of: HMPREF0389_RS09165
location: complement(418678..420489)
location: region:418678-420489:-1
so has part: feature:418678-420489:-1:exon

WP_049770193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418678-420489:-1:exon

HMPREF0389_RS01880
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01880
old locus tag: HMPREF0389_00260
so part of: sequence
location: complement(420759..422057)
location: region:420759-422057:-1
so has part: feature:420759-422057:-1:exon
subclass of: SO_0000010

position:420759:-1
position: 420759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422057:-1
position: 422057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420759-422057:-1:exon

HMPREF0389_RS01880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01880
old locus tag: HMPREF0389_00260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009531565.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MAKGSVRKKGKKWYYRFYIEDESGNRIQKEFPGTESKAETESLLRKAMEDYDNKKFIAKNENVTLSDMLDMWVEEELKPGYLSNGTVMAYQATVRRIKQHPIGKRKLKTVTSDHLQSFMDLLSFGGTKPDGTVAQPLSIGGIRQYSAVLQGAFRFAVFPKKLISFNPMQYVIRRNQAEDYELFVENNAIQQVTPTINHEQFKELIAYLEKKNNPAVLPIQIANYTGLRIGEACGLDWQDINLEEQYLTVRRSMRYNQMRHKVEVGPTKRKKVREVDFGNVLTDILKKAKKEQLQNRMKYGELYSLNYYVEVKEKNRSYFEVYTLGMNENVPEDYKPLSLVCLRPDGAYESPSTVSLVCRSAQKKIPGLEDFHFHTLRHTFTSNLLSYGAAPKEVQELLGHADVTTTMNIYAHASREAKRSSAKLLDNAMGID
SIO_010081: HMPREF0389_RS01880
subclass of: SO_0000673
so part of: HMPREF0389_RS01880
location: complement(420759..422057)
location: region:420759-422057:-1
so has part: feature:420759-422057:-1:exon

WP_014262047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420759-422057:-1:exon

HMPREF0389_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01885
old locus tag: HMPREF0389_00259
so part of: sequence
location: complement(422149..422361)
location: region:422149-422361:-1
so has part: feature:422149-422361:-1:exon
subclass of: SO_0000010

position:422149:-1
position: 422149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422361:-1
position: 422361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422149-422361:-1:exon

HMPREF0389_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01885
old locus tag: HMPREF0389_00259
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004612412.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MVPRIGMTIDETADYTGIGRTTLRHLIRSGKIPTLKIGRKTIIRVDTMEYFLKINEGLNLLDNDEVRAVK
SIO_010081: HMPREF0389_RS01885
subclass of: SO_0000673
so part of: HMPREF0389_RS01885
location: complement(422149..422361)
location: region:422149-422361:-1
so has part: feature:422149-422361:-1:exon

WP_242821728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422149-422361:-1:exon

HMPREF0389_RS09220
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS09220
so part of: sequence
location: complement(422664..422789)
location: region:422664-422789:-1
so has part: feature:422664-422789:-1:exon
subclass of: SO_0000010

position:422664:-1
position: 422664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422789:-1
position: 422789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422664-422789:-1:exon

HMPREF0389_RS09220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS09220
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFFYRRNRNNNFGYTVLNVKDGAKNTNIASKEKRFYGNDMQ
SIO_010081: HMPREF0389_RS09220
subclass of: SO_0000673
so part of: HMPREF0389_RS09220
location: complement(422664..422789)
location: region:422664-422789:-1
so has part: feature:422664-422789:-1:exon

WP_278214615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422664-422789:-1:exon

HMPREF0389_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01890
old locus tag: HMPREF0389_00258
so part of: sequence
location: complement(422944..423366)
location: region:422944-423366:-1
so has part: feature:422944-423366:-1:exon
subclass of: SO_0000010

position:422944:-1
position: 422944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423366:-1
position: 423366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422944-423366:-1:exon

HMPREF0389_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01890
old locus tag: HMPREF0389_00258
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262049.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma factor-like helix-turn-helix DNA-binding protein
translation: MKKINLRDYYPFYKEDFFIEVEDQIAEILKVFDIQEASYQRYIRRYKAYYSLDVDNGIENSILLTAQTPDEIYERKLTKEQLYRGLNSIPKKQADRIYAHYFLGMSKSEIAKSEQVDERAVRESIERGLKNMAKFLKKVL
SIO_010081: HMPREF0389_RS01890
subclass of: SO_0000673
so part of: HMPREF0389_RS01890
location: complement(422944..423366)
location: region:422944-423366:-1
so has part: feature:422944-423366:-1:exon

WP_014262049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422944-423366:-1:exon

HMPREF0389_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01895
old locus tag: HMPREF0389_00257
so part of: sequence
location: complement(423830..424429)
location: region:423830-424429:-1
so has part: feature:423830-424429:-1:exon
subclass of: SO_0000010

position:423830:-1
position: 423830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424429:-1
position: 424429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423830-424429:-1:exon

HMPREF0389_RS01895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01895
old locus tag: HMPREF0389_00257
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006598777.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MptD family putative ECF transporter S component
translation: MNNDVKKEKLEVKDLILIGVMAILLYACMFVVVLILGMNPVTYLFAPAISGIPAGIVMMLLLSKAPKKGTFFLASTVVAVFFWIMGRLPLDVITMLFCGLIGELLYGALGRKSFRGMAMAHAVYTCGLTLVAFISVVLLKDAFAEAFAMYGESYISKIIELVTPLSLAGLCLLSAFCGIIGAYIGKILLKKHFEKAGVL
SIO_010081: HMPREF0389_RS01895
subclass of: SO_0000673
so part of: HMPREF0389_RS01895
location: complement(423830..424429)
location: region:423830-424429:-1
so has part: feature:423830-424429:-1:exon

WP_014262050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423830-424429:-1:exon

HMPREF0389_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01900
old locus tag: HMPREF0389_00256
so part of: sequence
location: complement(424419..425906)
location: region:424419-425906:-1
so has part: feature:424419-425906:-1:exon
subclass of: SO_0000010

position:424419:-1
position: 424419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425906:-1
position: 425906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424419-425906:-1:exon

HMPREF0389_RS01900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01900
old locus tag: HMPREF0389_00256
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006598778.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-coupling factor ABC transporter ATP-binding protein
translation: MLEIKNLSVKYAGAEAESLYQFSLSVKDGECILLTGSSGCGKTTVTRCLNGLLPNFYSCEMQGEIFLNGKEISDLSMKEIASLTGSVFQDPRSQFFTLDVDSEIAFPCENLGLAQAEIQERVLSAASLTGATHLLERKVTELSSGQKQSVAIASACALHPKILVLDEPSANLDKEATERLKQILLNLKSKGTTILISEHKIYWLAGLCDRMIYLENGRKRIELSANEFQCMKIDESRHLGLRCVSPYWKEMKKTVQSDFIEKVKGKQISFHYHKEAPIFNELDFSIPSGEVIGIVGENGIGKSTLARLCVGLEQPQRGDILFNGKKCNKRDRIHKSYYVMQDADYQLFSDSVLGELVAGKEDDKETNEAAIQILDRLGILLYKDRHPGSLSGGEKQRVTIAVALMKDSEIILFDEPTSGLDGRNMLRVSKLLKDLTKQGKTVLVISHDAEFLLETADCLLHLERCRAPTIIPFCKENREQIYQILFSERSKNNEQ
SIO_010081: HMPREF0389_RS01900
subclass of: SO_0000673
so part of: HMPREF0389_RS01900
location: complement(424419..425906)
location: region:424419-425906:-1
so has part: feature:424419-425906:-1:exon

WP_014262051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424419-425906:-1:exon

HMPREF0389_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01905
old locus tag: HMPREF0389_00255
so part of: sequence
location: complement(425899..426603)
location: region:425899-426603:-1
so has part: feature:425899-426603:-1:exon
subclass of: SO_0000010

position:425899:-1
position: 425899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426603:-1
position: 426603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425899-426603:-1:exon

HMPREF0389_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01905
old locus tag: HMPREF0389_00255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006598779.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-coupling factor transporter transmembrane component T
translation: MFKARKPDPRVWILFTATSSMLAFMMPKRVLFPIYAIGMVLLAALFCLGSKKVALKAALPYIAIIVWELIAEHFKLPIVGATFSMIKIIILLYEPPLLCGLIIAKAIKLSELLTALSNMRLSRKLILPLAVAFRYFPTLKMEVGSIRESLLLRDMKPSFLHPVQSMENYLIPILMRSLKVSDELSQSALCRGYSLAGSRGTLVPVVLRPLDYILFAVIIFWDVLLWIWGGGYIA
SIO_010081: HMPREF0389_RS01905
subclass of: SO_0000673
so part of: HMPREF0389_RS01905
location: complement(425899..426603)
location: region:425899-426603:-1
so has part: feature:425899-426603:-1:exon

WP_014262052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425899-426603:-1:exon

HMPREF0389_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01910
old locus tag: HMPREF0389_00254
so part of: sequence
location: complement(426596..428335)
location: region:426596-428335:-1
so has part: feature:426596-428335:-1:exon
subclass of: SO_0000010

position:426596:-1
position: 426596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428335:-1
position: 428335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426596-428335:-1:exon

HMPREF0389_RS01910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01910
old locus tag: HMPREF0389_00254
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006598780.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MFKRIKRILQIAGQKKSALITAVLFNILKAFCVGGTYITLLFALNDLISNAFESRKLMIYSGTLATLLILRYMFEYAVNSLQSSAGYEMMCDLRIKETNRLTTLPLGDFQREGVGKLASVFTNDMSFVEMYCISTLSGFVAGLTVVICTSIVMLIADWRLALCAMVGFIPAWFVYRDSRKKFVRYGKHRQTESQNCIGSMLEYLSGMETIRSYQMTNLIFNKMDKDLQRYRDASENYELKVQVPMMWFQLFVRLGMALIFVCGLFFYFAEITSLPVFLFFAIISASYYQPVESMLLDFGTLNLMDISLDHIKELQEKESLPNGDSGTISSCELKAEQVSFTYDNETEYAVEDITSIIPEHSFTALVGSSGSGKTTLLLLLARFWDVKNGTIRIGGTDVRDTPYMELLNHLSVVFQDVYLFSGTVADNIRMGRPNATQEEMIAAAKAACCHDFIMALPEGYNTLVGSGGNTLSGGERQRISIARAILKDAPIILMDEALSSIDSENALEIQKGLDILTKGKTVVMIAHTLSYIRFADQIIVMDNGKIVELGTHDDLLTKEGLYMDMWEKEHTMKRWKLHV
SIO_010081: HMPREF0389_RS01910
subclass of: SO_0000673
so part of: HMPREF0389_RS01910
location: complement(426596..428335)
location: region:426596-428335:-1
so has part: feature:426596-428335:-1:exon

WP_014262053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426596-428335:-1:exon

HMPREF0389_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01915
old locus tag: HMPREF0389_00253
so part of: sequence
location: complement(428328..430073)
location: region:428328-430073:-1
so has part: feature:428328-430073:-1:exon
subclass of: SO_0000010

position:428328:-1
position: 428328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430073:-1
position: 430073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428328-430073:-1:exon

HMPREF0389_RS01915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01915
old locus tag: HMPREF0389_00253
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006598781.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MKNGIRTLFRFLSLKGQKQLCLSGFFAILSATFSVFPMFGLYLILDAILDGRNFYGCLPGICVSVSGIFLQVLFHMVSTRLSHRTAFDALYEIRLQILQKLSQINQGYMDENPIGKLKSMLFDDVEQLEMFYGHHFPEILGGIFIPIVMGMCIIVLDIRIALALFITIIIFALCLRSIGKLQNKNFPGMFQTSQAMNTAMIEFIHGIKELRIFSVEEKTYSKFEQATNNYRHFMVKWFKDSRHQMTINTIVMNSSIVFVFPVAGYLYLQGAFQLSRLLLYLFVALCFATPLSKIAIYTDMLHLNAQIADRLNGLMILPELEAPSDFKELNDYSITFEKVSFAYGEKEVLHSISFQATENKVTALVGPSGSGKSTIAKLIDRFWDAKGGEVRIGGIDIRKIPKEQLTQIISFVTQDITIFEMSIHENIQLGNPNASFDEVVKASQAACCHDFIVSLPDGYDTKLGKEISLSGGEKQRISLARAILKNAPILVLDEATAYCDPDNEAELQKALSALAKGKTVIVIAHRLSSVADADQILLIKDGCLVAHGTHDDLLNHSTAYSDMWQAFLMSERWFAGREEHV
SIO_010081: HMPREF0389_RS01915
subclass of: SO_0000673
so part of: HMPREF0389_RS01915
location: complement(428328..430073)
location: region:428328-430073:-1
so has part: feature:428328-430073:-1:exon

WP_156775227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428328-430073:-1:exon

HMPREF0389_RS01920
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01920
old locus tag: HMPREF0389_00252
so part of: sequence
location: complement(430203..431183)
location: region:430203-431183:-1
so has part: feature:430203-431183:-1:exon
subclass of: SO_0000010

position:430203:-1
position: 430203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431183:-1
position: 431183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430203-431183:-1:exon

HMPREF0389_RS01920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01920
old locus tag: HMPREF0389_00252
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006598782.1
GO function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MKYFVYSQADYIDFYKAVSSSVITDGRETIFHIAPSWGNGTVTFFHISEYSSFLMFDICFSETVEIIYELPRDHFEIAYCVKGNSVLIEGKNKKDISPNTMTLSMATMSKETAKGILKIPKGIQYVNLAFAFSKEACCHYFGSVGFKLWNTALNGDDRDEQFFFNQEFLPQVRNAFFQIQSCAIKDKNAKCLFIESRISEIISYICEAGLREEQLDIDAFEKEQIKKIPSRMTEDFLNPPTISELSRELGLNITKLKKGFKLLYGTTIYGYHKKAKLQHARDLLLNTELTILDVAYQSGYISQSQFGVAFKEEFGVTPSDVRKNGF
SIO_010081: HMPREF0389_RS01920
subclass of: SO_0000673
so part of: HMPREF0389_RS01920
location: complement(430203..431183)
location: region:430203-431183:-1
so has part: feature:430203-431183:-1:exon

WP_014262055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430203-431183:-1:exon

HMPREF0389_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01925
old locus tag: HMPREF0389_00251
so part of: sequence
location: complement(431527..432609)
location: region:431527-432609:-1
so has part: feature:431527-432609:-1:exon
subclass of: SO_0000010

position:431527:-1
position: 431527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432609:-1
position: 432609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431527-432609:-1:exon

HMPREF0389_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01925
old locus tag: HMPREF0389_00251
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262305.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MEYNNTTANSRKNKHLNDFERGQIQLLHNKGYSAYKIAKELRRASNTIRNELKRGTVTQIKGIHDVQVYYPDTGKLVYEKNRKNCKKKFKALKCSKYLDFVKQKFNEEKWSLDAICGYAKLNKLYEGQRVCTKTLYNYVDIGLIGIKSIDLPLRVKRKPAKKRVKENKRKLGKSIEERPQEIETRKTFGNWEIDTVIPKKNKEEASLITITERKSRMELILKLNRRKASIVNETLKNTLNRLKEPQKIFRSITSDNGLEFAKLCELEKTYIGNIYYCHPNNPQERGTNEKHNSLIRRFLPKGKSLNDYEEEHYIKIMNWMNNLPRKILNYRTPIEVFIEELNNLGLLDDNEELVQFDIAI
SIO_010081: HMPREF0389_RS01925
subclass of: SO_0000673
so part of: HMPREF0389_RS01925
location: complement(431527..432609)
location: region:431527-432609:-1
so has part: feature:431527-432609:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:431527-432609:-1:exon

HMPREF0389_RS08850
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS08850
old locus tag: HMPREF0389_00250
so part of: sequence
location: 432841..433902
location: region:432841-433902:1
so has part: feature:432841-433902:1:exon
subclass of: SO_0000010

position:432841:1
position: 432841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433902:1
position: 433902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432841-433902:1:exon

HMPREF0389_RS08850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS08850
old locus tag: HMPREF0389_00250
inference: COORDINATES: protein motif:HMM:NF013752.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MVDRLSRHLEKGTPIPSLSAYLQQIKKWVPTHPVIHIDDTDVVKPDGYKFEALGIVRDGSESTSAKNVYKKGYHVTEACVLTSSNHPVSLFSQIHSSHEKDYKSANTITFQAIERGAALFGNAIFAMDRGYDDNKMFLKLDDLNQHYVIRLKSNRKLFYHRKWTTATELCNRRKGKIKTSVFYKGKNQEAYLSHVKVQITASKNDIYLVLIYGITEHPMMLATNIEIKSKDDVIRVARTYFSRWKIEEYFRCKKQMFRFENFRVRKLKAINALNFYITLCMAFLAMISMKSETSALKVSIIQTANPVKKKVFFCYYRLAKGILGILSYAKEGVRLWFRTKRPAYRQLCLPLVA
SIO_010081: HMPREF0389_RS08850
subclass of: SO_0000673
so part of: HMPREF0389_RS08850
location: 432841..433902
location: region:432841-433902:1
so has part: feature:432841-433902:1:exon

WP_242821721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432841-433902:1:exon

HMPREF0389_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01940
old locus tag: HMPREF0389_00249
so part of: sequence
location: complement(434602..435999)
location: region:434602-435999:-1
so has part: feature:434602-435999:-1:exon
subclass of: SO_0000010

position:434602:-1
position: 434602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435999:-1
position: 435999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434602-435999:-1:exon

HMPREF0389_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01940
old locus tag: HMPREF0389_00249
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015572846.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MATTRIIPMHIGKGKSIAQSIRDRTDYVKNPDKTQQGEFISAYECDIATIDAEFLLLKNQYHHKTGRRQNRKNDVLAYQIRQAFKPGEITPEEANRIGYELALSWTKQNYPFIVCTHTDKAHIHNHIVYSAVSLDCKRKFRNFWNSTKAVRNLSDRLCLENGLSIVENPKETKCHYGKWLGEKKKQSKREKLKTAIDDTLAQKPSSFENFLKKMEEADYEIKHGKHLAFRLNGDKKFIRCKDHSLGEDYTEEAIKERILGKRNSPKQKQESKDKIDLLIDIQEKIKAGKGAGYEHWAKIFNLKQAAKTLSYLMENKLTDYEALEEKTKQLVSDFNTLSAQMKQAEKRMQDISDLKKHIYQYAKTKEVYVAYRKAGYSKKFYAENEEKIQLHKAAKAAFSALNTEKLPTIKELSKEYEKLLTEKKNLYSDYRKKKKEMQEILTVKSNVDRLLFPPQKEQPERENER
SIO_010081: HMPREF0389_RS01940
subclass of: SO_0000673
so part of: HMPREF0389_RS01940
location: complement(434602..435999)
location: region:434602-435999:-1
so has part: feature:434602-435999:-1:exon

WP_014262057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434602-435999:-1:exon

HMPREF0389_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01945
old locus tag: HMPREF0389_00248
so part of: sequence
location: complement(436074..436355)
location: region:436074-436355:-1
so has part: feature:436074-436355:-1:exon
subclass of: SO_0000010

position:436074:-1
position: 436074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436355:-1
position: 436355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436074-436355:-1:exon

HMPREF0389_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01945
old locus tag: HMPREF0389_00248
inference: COORDINATES: protein motif:HMM:NF039506.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CD1845 family protein
translation: MRILFKLLLWPLVLVLSFIVAFGRFLCTFSSILLSVLSGLFFFFAVGNLIMGEKEAAAGLLLIGFFISPFGLPALALWMVEKLDDLKEMIREL
SIO_010081: HMPREF0389_RS01945
subclass of: SO_0000673
so part of: HMPREF0389_RS01945
location: complement(436074..436355)
location: region:436074-436355:-1
so has part: feature:436074-436355:-1:exon

WP_014262058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436074-436355:-1:exon

HMPREF0389_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01950
old locus tag: HMPREF0389_00247
so part of: sequence
location: complement(436425..436766)
location: region:436425-436766:-1
so has part: feature:436425-436766:-1:exon
subclass of: SO_0000010

position:436425:-1
position: 436425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436766:-1
position: 436766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436425-436766:-1:exon

HMPREF0389_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01950
old locus tag: HMPREF0389_00247
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009531056.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mobilization protein
translation: MKEKNRVRNVQLHFMVSPEERKQIEENMKLLSTENLGAYLRKMALDGYLIHLDLSEVREMIRLLRNATNNLNQIAKVANATGNIYGGEIKMMQERYELLWRSARKILSELSKI
SIO_010081: HMPREF0389_RS01950
subclass of: SO_0000673
so part of: HMPREF0389_RS01950
location: complement(436425..436766)
location: region:436425-436766:-1
so has part: feature:436425-436766:-1:exon

WP_014262059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436425-436766:-1:exon

HMPREF0389_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01955
old locus tag: HMPREF0389_00246
so part of: sequence
location: complement(436807..438231)
location: region:436807-438231:-1
so has part: feature:436807-438231:-1:exon
subclass of: SO_0000010

position:436807:-1
position: 436807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438231:-1
position: 438231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436807-438231:-1:exon

HMPREF0389_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01955
old locus tag: HMPREF0389_00246
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007705931.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antirestriction protein ArdA
translation: MIISGIEKDRYYSFKESGVLEETIRYGKKIQKETDKENKSALSVSSSIKETGTNYEVTDAPFEAFITNLGKYNEGELVGEWVAFPTDRESLQEVFKRIGIGSENELGTVYEEIFISDYDCRISNLYNVLGEYESLNELNYLASKIEELSESEKEHFEAAMEISDYAGSVKDLINLTENLDRYEVYPGIEDYDDLGRMYIDEYGILEVADPLKNYFDYAAYGRDVAMDEGGSFTSYGYIRDNYDTFREFYHGNRENIPEEYLITGNIEEPEPEKSDTLTVLMVEPGKEAYVTEIKSDISSLQAQVGGLIESVYAFHDPVVLVCNDEGKINGMELNRALYDETGNLYDIIGGPFFIAGLSEDGFTSLSTELCNKYQERFKTPEIFANIGGEIVAIPVTASIKEKKENYLRAAELSQEQNYNMIDGQLNNIALEKTHEKPSSVLARLKENEAMIQKNAAEKKQDISKIKKLIEPERS
SIO_010081: HMPREF0389_RS01955
subclass of: SO_0000673
so part of: HMPREF0389_RS01955
location: complement(436807..438231)
location: region:436807-438231:-1
so has part: feature:436807-438231:-1:exon

WP_242821729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436807-438231:-1:exon

HMPREF0389_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01960
old locus tag: HMPREF0389_00245
so part of: sequence
location: complement(438228..438758)
location: region:438228-438758:-1
so has part: feature:438228-438758:-1:exon
subclass of: SO_0000010

position:438228:-1
position: 438228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438758:-1
position: 438758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438228-438758:-1:exon

HMPREF0389_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01960
old locus tag: HMPREF0389_00245
inference: COORDINATES: protein motif:HMM:NF015935.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: JAB domain-containing protein
translation: MINEARYIQSYAKIIGVKEEAAISYAQKKGTLALINNASGLLTTKTQREKHKAFVDLYRMSSELHHENPVLSSPEAVTSFMQSVMEHIHDKEAMMAVFLDTKNRVIDYEEVSLGTINSSIVHPREIFRGAVINKANAIILCHNHPSGDLTPSGEDKTITLRLKEAGKLMGLRFWIM
SIO_010081: HMPREF0389_RS01960
subclass of: SO_0000673
so part of: HMPREF0389_RS01960
location: complement(438228..438758)
location: region:438228-438758:-1
so has part: feature:438228-438758:-1:exon

WP_014262061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438228-438758:-1:exon

HMPREF0389_RS09070
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS09070
old locus tag: HMPREF0389_00244
so part of: sequence
location: complement(438755..438928)
location: region:438755-438928:-1
so has part: feature:438755-438928:-1:exon
subclass of: SO_0000010

position:438755:-1
position: 438755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438928:-1
position: 438928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438755-438928:-1:exon

HMPREF0389_RS09070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS09070
old locus tag: HMPREF0389_00244
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009531054.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTKEMIKLLIDVEVDTEDLRLLKEHPKEHVATKREAWKLEQLFLLLENAKEMEERL
SIO_010081: HMPREF0389_RS09070
subclass of: SO_0000673
so part of: HMPREF0389_RS09070
location: complement(438755..438928)
location: region:438755-438928:-1
so has part: feature:438755-438928:-1:exon

WP_009531054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438755-438928:-1:exon

HMPREF0389_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01965
old locus tag: HMPREF0389_00243
so part of: sequence
location: 439019..439306
location: region:439019-439306:1
so has part: feature:439019-439306:1:exon
subclass of: SO_0000010

position:439019:1
position: 439019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439306:1
position: 439306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439019-439306:1:exon

HMPREF0389_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01965
old locus tag: HMPREF0389_00243
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262062.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MAKTANINVRIDPETKASAEQLFSSFGITVTDAINIFLHKSLMEGGLPFEMKQPRFNLETEMAMEEAKLIMAGKIPAKRYASVHELLDELETDGE
SIO_010081: HMPREF0389_RS01965
subclass of: SO_0000673
so part of: HMPREF0389_RS01965
location: 439019..439306
location: region:439019-439306:1
so has part: feature:439019-439306:1:exon

WP_014262062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439019-439306:1:exon

HMPREF0389_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01970
old locus tag: HMPREF0389_00242
so part of: sequence
location: 439306..439584
location: region:439306-439584:1
so has part: feature:439306-439584:1:exon
subclass of: SO_0000010

position:439584:1
position: 439584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439306-439584:1:exon

HMPREF0389_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01970
old locus tag: HMPREF0389_00242
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007156959.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system YafQ family toxin
translation: MLELVTTGAFRKDLKLAKKRGYDLSLLETVLNTLLEEKTLDQRYHDHALTGNYIGFRECHILPDWLLIYAVNKSQLILTASRTGTHSDLFGR
SIO_010081: HMPREF0389_RS01970
subclass of: SO_0000673
so part of: HMPREF0389_RS01970
location: 439306..439584
location: region:439306-439584:1
so has part: feature:439306-439584:1:exon

WP_014262063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439306-439584:1:exon

HMPREF0389_RS08985
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS08985
so part of: sequence
location: complement(439618..439779)
location: region:439618-439779:-1
so has part: feature:439618-439779:-1:exon
subclass of: SO_0000010

position:439618:-1
position: 439618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439779:-1
position: 439779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439618-439779:-1:exon

HMPREF0389_RS08985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS08985
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYFTDSPYERMMMEIPRPQKEPPKKAVSSLKEKSSDKRASDSLKEKKERKGC
SIO_010081: HMPREF0389_RS08985
subclass of: SO_0000673
so part of: HMPREF0389_RS08985
location: complement(439618..439779)
location: region:439618-439779:-1
so has part: feature:439618-439779:-1:exon

WP_156775228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439618-439779:-1:exon

HMPREF0389_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01975
old locus tag: HMPREF0389_00241
so part of: sequence
location: complement(439779..440465)
location: region:439779-440465:-1
so has part: feature:439779-440465:-1:exon
subclass of: SO_0000010

position:440465:-1
position: 440465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439779-440465:-1:exon

HMPREF0389_RS01975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01975
old locus tag: HMPREF0389_00241
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009531066.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4366 domain-containing protein
translation: MKNKFQKITLGFMLLISLFTFSQIAYAGGPDYEEPTEEITENPMTEKEKNPLTPDGNATLVDQASDKDGKEFYTFTSPAGNQFFLIIDKQRSDNNVYFLDYVTEKDLISLAKKDKENPLITEVSEPETKQPEPEIKEEKPEEKPVEEEKPEKKQSNIGMFLILLLVTVGVGIVAYYFKILKPKQELDAADDFEEIEFLTEEDTEHEEEFEDLDLDMEETSEFSEEEEL
SIO_010081: HMPREF0389_RS01975
subclass of: SO_0000673
so part of: HMPREF0389_RS01975
location: complement(439779..440465)
location: region:439779-440465:-1
so has part: feature:439779-440465:-1:exon

WP_014262064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439779-440465:-1:exon

HMPREF0389_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01980
old locus tag: HMPREF0389_00240
so part of: sequence
location: complement(440455..440694)
location: region:440455-440694:-1
so has part: feature:440455-440694:-1:exon
subclass of: SO_0000010

position:440455:-1
position: 440455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440694:-1
position: 440694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440455-440694:-1:exon

HMPREF0389_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01980
old locus tag: HMPREF0389_00240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4315 family protein
translation: MTKLEKIDKELEKARSRLLEWQTKVKELEAKRIEEENTQIVGIVRSLNMSPEELATFLKRPDKISGLSKIKREESDHEK
SIO_010081: HMPREF0389_RS01980
subclass of: SO_0000673
so part of: HMPREF0389_RS01980
location: complement(440455..440694)
location: region:440455-440694:-1
so has part: feature:440455-440694:-1:exon

WP_014262065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440455-440694:-1:exon

HMPREF0389_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01985
old locus tag: HMPREF0389_00239
so part of: sequence
location: complement(440716..442557)
location: region:440716-442557:-1
so has part: feature:440716-442557:-1:exon
subclass of: SO_0000010

position:440716:-1
position: 440716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442557:-1
position: 442557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440716-442557:-1:exon

HMPREF0389_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01985
old locus tag: HMPREF0389_00239
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009531065.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: C40 family peptidase
translation: MKKNKNRYIQSFRKEAGDKTSSASGHSEDFVSKNEKTGNRNFYFKEEEIHNHVSQKEKALKKDLQRSKAKEKHLQEKLQETGAHLPKKKRLRVQREFDPETGKRKTKLKLQEEVKTPKKISALPATTFLADKAMRTGSFLKTEEEENTGEEIAGVGTQSVAYLARKAVKTAYQKQQRMPYLRMKQLEKKLQDTHIKALYQQEMLEHPERMSNPLSRFQQKRRIKKAYVKELREAKKQAQNAGKGARKTKDLLGRITDFFKGFATKHKGILLAIGIFAFLFVMLSSSLSSCSMLLQSGSGMVVSGTYIAEDHEILEAENGYLALEQKLQRELAEVESTRPGFDEYRYQVDQIGHNPHELISFLTLKHEDFKAKDVQETLQSLLSQQYSLSFREETETRYRTETTTSTDPVTGETVTETEEVPYEYRILYVTLKNKGLGIVTAENLTESEKSRYALLLRTRGNKPHLFADNIYANPKEGENYKIPKEALSDPSFASLMKEAEKYLGYPYVWGGSSPSTSFDCSGFICWVYTKSGVANIPRTTAQGIYNQCAPVSASEARPGDIIFFTGTYDSGSPVSHVGIYVGNGMMLHCGSPIQYTSIQSPYWREHFYAFGRP
SIO_010081: HMPREF0389_RS01985
subclass of: SO_0000673
so part of: HMPREF0389_RS01985
location: complement(440716..442557)
location: region:440716-442557:-1
so has part: feature:440716-442557:-1:exon

WP_014262066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440716-442557:-1:exon

HMPREF0389_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01990
old locus tag: HMPREF0389_00238
so part of: sequence
location: complement(442544..444943)
location: region:442544-444943:-1
so has part: feature:442544-444943:-1:exon
subclass of: SO_0000010

position:442544:-1
position: 442544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444943:-1
position: 444943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442544-444943:-1:exon

HMPREF0389_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01990
old locus tag: HMPREF0389_00238
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009531060.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraE
translation: MIGGVDARLGRTEKQRLTLAVKKAKRDGKIPKSAQQTIAYQEIYPDGLCKVKDKLYTKTMQFSDINYQLARPEDKTQIFELWCDFFNYMDPSIKIQLSFVNEYVNRMDYEKSIDIPKREDGFDDVRKEYSEMLSAQLGKGNNGLIRKKYLTFGIYAEDMKTARLRLERIEADLIGNMKALGVKARTLSGLERLKVLHNAFHPGGQEKLRFAWDSIVKTGLSTKDFISPSSFDFRDSKTFHMGSTLGAVSFVQIIAPELNDRMLSDLLNLDSASTVTFHIRSLNQAEAIKAVKRKLTDIEKGKIEEQKKAVRSGYDMDVLPPDLITYAQEAKNLLNSLQSHNERLFLVTMLIMNTSESRKKLENSIFQTAGIVQKHNCSLKRLDFLQEQGLMSSLPIGENHIEIERSLTTSSIAIFIPFTTEELFMDGESLYYGLNALSHNLIMADRKRLKNPNGLFLGVPGSGKSFAAKREIVNAFLITEDDVIISDPEAEYAPLVNRLGGQVVKLSPVSKHYVNPMDINPDYSDEEDPLTLKSDFILSLCELIVGGKDGLQPVEKTIIDRCTRLVYRNYLTDPKPKNMPILGDLHALLKEQPEAEAARIATALEIYVTGSLNVFNHRTNVNLNNRLICYDIKELGKALKKIAMLILQDQVWNRVTLNRAAHKTTWFYQDEFHLMLKDEQTAAYSVEVWKRFRKWGGVPSGLTQNIKDLLASREIENIFENSDFIYMLSQAAGDRAILAKQLGISPTQLSYVTHSNPGEGLLFYGNTIIPFVDHFPHNHLYSIMTTRPEDLMEAADEEK
SIO_010081: HMPREF0389_RS01990
subclass of: SO_0000673
so part of: HMPREF0389_RS01990
location: complement(442544..444943)
location: region:442544-444943:-1
so has part: feature:442544-444943:-1:exon

WP_207635085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442544-444943:-1:exon

HMPREF0389_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS01995
old locus tag: HMPREF0389_00237
so part of: sequence
location: complement(444963..445358)
location: region:444963-445358:-1
so has part: feature:444963-445358:-1:exon
subclass of: SO_0000010

position:444963:-1
position: 444963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445358:-1
position: 445358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444963-445358:-1:exon

HMPREF0389_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS01995
old locus tag: HMPREF0389_00237
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002577973.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PrgI family protein
translation: MPYVTIPKDLSRIKNKLVFNLTKRQLISFSLAGGIGIPFYLFSRSVIGGDVAAFLMIALMLPFMAFGVYEKDGQPLEKILYHMIHARFLLPRIRVYQTDNLYSALERQAKIDKEVMEIVYHKQKRKSERKK
SIO_010081: HMPREF0389_RS01995
subclass of: SO_0000673
so part of: HMPREF0389_RS01995
location: complement(444963..445358)
location: region:444963-445358:-1
so has part: feature:444963-445358:-1:exon

WP_014262068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444963-445358:-1:exon

HMPREF0389_RS02000
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02000
old locus tag: HMPREF0389_00236
so part of: sequence
location: complement(445312..445932)
location: region:445312-445932:-1
so has part: feature:445312-445932:-1:exon
subclass of: SO_0000010

position:445312:-1
position: 445312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445932:-1
position: 445932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445312-445932:-1:exon

HMPREF0389_RS02000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02000
old locus tag: HMPREF0389_00236
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009531058.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MT-A70 family methyltransferase
translation: MGKEEYLIPRKFNILYADPPWKYERNKVQGAAENHYSTMSIEQLCALDVEKITDENCTLFLWSTFPFLPEALRLIKAWGFTYKTTAFVWLKQNRKNKDWFFGLGFWTRGNAEICLLATKGKPQRKSAKVSQLIISPIDKHSKKPDIVREKIVELMGDLPRIELFARQTTPGWEVFGNEVKSSVTLSEKEENYAVCNNSKGFIPHKE
SIO_010081: HMPREF0389_RS02000
subclass of: SO_0000673
so part of: HMPREF0389_RS02000
location: complement(445312..445932)
location: region:445312-445932:-1
so has part: feature:445312-445932:-1:exon

WP_014262069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445312-445932:-1:exon

HMPREF0389_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02005
old locus tag: HMPREF0389_00235
so part of: sequence
location: complement(445944..446813)
location: region:445944-446813:-1
so has part: feature:445944-446813:-1:exon
subclass of: SO_0000010

position:445944:-1
position: 445944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446813:-1
position: 446813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445944-446813:-1:exon

HMPREF0389_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02005
old locus tag: HMPREF0389_00235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009531068.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CD0415/CD1112 family protein
translation: MDYIIDQFNQWIKDFLIGCITNNLSGLFDTVNTKVGEIAVEVGKTPSGWNGGVLSMIHSVSDTVIIPIAGMILAFVLTYELIQMLIDRNNLHEVDSWIFFKWIFKSFVAIYLVTHTFEMVMAVFDVAQHVVSGSQGVISSQTSIDIASAISDLETTLQGMDIGELFGLCMETLLIRFTMNIMSWCVFIIIYGRMIEIFLYCSLGPIPLATMANRDWGQMGQNYLRALFALGFQGFFILICVGIYAVMVKAITTSADIHAAVWAVAGYTVLLCFSLFKTASLSKSIFNAH
SIO_010081: HMPREF0389_RS02005
subclass of: SO_0000673
so part of: HMPREF0389_RS02005
location: complement(445944..446813)
location: region:445944-446813:-1
so has part: feature:445944-446813:-1:exon

WP_014262070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445944-446813:-1:exon

HMPREF0389_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02010
old locus tag: HMPREF0389_00234
so part of: sequence
location: complement(446826..447041)
location: region:446826-447041:-1
so has part: feature:446826-447041:-1:exon
subclass of: SO_0000010

position:446826:-1
position: 446826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447041:-1
position: 447041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446826-447041:-1:exon

HMPREF0389_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02010
old locus tag: HMPREF0389_00234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002575635.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Maff2 family protein
translation: MAFFNQAISTLSVLVIAIGAGLGVWGAVNLLEGYGSDNPGAKSQGIKQLMSGGGIILIGVKLIPMLSGLFS
SIO_010081: HMPREF0389_RS02010
subclass of: SO_0000673
so part of: HMPREF0389_RS02010
location: complement(446826..447041)
location: region:446826-447041:-1
so has part: feature:446826-447041:-1:exon

WP_034910652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446826-447041:-1:exon

HMPREF0389_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02015
old locus tag: HMPREF0389_00233
so part of: sequence
location: complement(447184..448944)
location: region:447184-448944:-1
so has part: feature:447184-448944:-1:exon
subclass of: SO_0000010

position:447184:-1
position: 447184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448944:-1
position: 448944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447184-448944:-1:exon

HMPREF0389_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02015
old locus tag: HMPREF0389_00233
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262072.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MKQNLKKYLPQGVLYLSLLYLFMRLGEGYRLSKGGDFIDKSISGVFALGTISTNPIPSFHPFDFLFGLIGTFGIAMFVHFKRKNAKTYRHKEEYGSARFGKEADIKPFVDPKFENNMILTATEKLTMNPRPKNPKFARNKNALIVGGSGSGKTRFWFTPNLLQMHSSYVVTDPKAGILADCGNALLKNNYRLKVFNTINFKKSMHYNPFAYLHSEQDILKLVNVLISNTKGDGKSSDEFWNKAETLLYCALIGYIHYEAPKEEQNMNTLVELIASMEVREDDETFKNPVDYMFEALEAIDPEHFAVRQYRKFKLAAGKTLKSILISCGARLAVFDIAEVREIMSYDELELDTLGDEKTALFFIISDTDSSLNFLIAMAFTQMFDLLCKKADDHYGGRLPVHVRCLWDEAANTGQVPQLEKICSVIRSREISMCLGLQAQSQLKALYKENAETIIGNMDSRIFLGGAESSTLKEWSAMLGKQSIDTYNTNDTRGTSRSYGVNYQKLGRELLTPDELMAMDGAKCILQLRGVRPFFSDKYDLKKHPRYKLTADYDKRNTFDIEKFLSTRLQIKKNEVFQVYEFSENEL
SIO_010081: HMPREF0389_RS02015
subclass of: SO_0000673
so part of: HMPREF0389_RS02015
location: complement(447184..448944)
location: region:447184-448944:-1
so has part: feature:447184-448944:-1:exon

WP_014262072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447184-448944:-1:exon

HMPREF0389_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02020
old locus tag: HMPREF0389_00232
so part of: sequence
location: complement(448941..449423)
location: region:448941-449423:-1
so has part: feature:448941-449423:-1:exon
subclass of: SO_0000010

position:448941:-1
position: 448941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449423:-1
position: 449423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448941-449423:-1:exon

HMPREF0389_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02020
old locus tag: HMPREF0389_00232
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262073.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PcfB family protein
translation: MQEEVNERVVLVIKGGVTLSARALAKAMRKVLELRKNKNFPSHQKTGKQNIKQLIGQNAGVSNIELTNSNIKSFDRTARKYGIDYAVKKDRLSTPPKYLVFFKSRDADAMAAAFTEFSKRTLRKEKQRQSVKKTLEAFKKLIKEKGLDKVKELVKGERER
SIO_010081: HMPREF0389_RS02020
subclass of: SO_0000673
so part of: HMPREF0389_RS02020
location: complement(448941..449423)
location: region:448941-449423:-1
so has part: feature:448941-449423:-1:exon

WP_014262073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448941-449423:-1:exon

HMPREF0389_RS02025
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02025
old locus tag: HMPREF0389_00231
so part of: sequence
location: complement(449408..450499)
location: region:449408-450499:-1
so has part: feature:449408-450499:-1:exon
subclass of: SO_0000010

position:449408:-1
position: 449408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450499:-1
position: 450499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449408-450499:-1:exon

HMPREF0389_RS02025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02025
old locus tag: HMPREF0389_00231
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009531067.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA cytosine methyltransferase
translation: MRNIKLGSLFDGIGVFPLAASRCHIVPVWASEIEKVPMSITKRHFPNMEHLGDITKIKGGEITPVHIITFGSPCQNLSLAGCREGLSGSKSSLFFEAIRIIREMRGNTNGMYPTFAVWENVYGAFSSNHRMDFKSVLESFAGSEIPMPASGRWASAGMVRGRETDISWRLMDARYWGKPPLLQRRRRIFLVADFRGKRSGEILFKPRSMLPYPASCRKDRSSSARVHRSNLIKARGKIPIVHPFQERRMRGAAKERDRGNFLGSFGRPDDPFPTLLAGGINYFAFWYEGDEENGFIRYLTPTECERLQGLPEDWTKFGAMGEEVGTGARCKALGNSIALPCAEHIMQGIYEVLKGGEKPCRKK
SIO_010081: HMPREF0389_RS02025
subclass of: SO_0000673
so part of: HMPREF0389_RS02025
location: complement(449408..450499)
location: region:449408-450499:-1
so has part: feature:449408-450499:-1:exon

WP_014262074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449408-450499:-1:exon

HMPREF0389_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02030
old locus tag: HMPREF0389_00230
so part of: sequence
location: complement(450486..450842)
location: region:450486-450842:-1
so has part: feature:450486-450842:-1:exon
subclass of: SO_0000010

position:450486:-1
position: 450486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450842:-1
position: 450842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450486-450842:-1:exon

HMPREF0389_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02030
old locus tag: HMPREF0389_00230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009064726.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRPLAYISCALEKGNIQQQTEMTNYCRTVYEAGYFPICPPLFLPYFIRDEIPAEHKDGIDMSRDLLKRCHVLVVCGKEIDEGVKNEIAIAQRLKITATTLEGIMTIKKQGQDANEEH
SIO_010081: HMPREF0389_RS02030
subclass of: SO_0000673
so part of: HMPREF0389_RS02030
location: complement(450486..450842)
location: region:450486-450842:-1
so has part: feature:450486-450842:-1:exon

WP_014262075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450486-450842:-1:exon

HMPREF0389_RS02035
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02035
old locus tag: HMPREF0389_00229
so part of: sequence
location: complement(450839..451816)
location: region:450839-451816:-1
so has part: feature:450839-451816:-1:exon
subclass of: SO_0000010

position:450839:-1
position: 450839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451816:-1
position: 451816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450839-451816:-1:exon

HMPREF0389_RS02035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02035
old locus tag: HMPREF0389_00229
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016227162.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3991 and TOPRIM domain-containing protein
translation: MPGVTKQQIAKAKEWDLLSYLMVHEPEELKKSGPEEYRTKTHDSLVISNGKWHWFSRNIGGRSALDYLIKVRGEDFITAVNHLCQGTPSPSLFQPVEKKENREEVKKPFLLPEAASSVSRVRSYLKSRGIHEEVIGSCIRVGTLYESKKHHNCVFVGKDENNKARFASLRGTASHFKLDISGSDKRYGFHIPAESKDCSLLEVFESPIDAMSRASIKLFLGENYKDRHYLSLSGTAPLALLHFLKKNPQVRSVVLCLDNDEAGIMGMEKIRKCIQEDPSLSGQVLTLIHKPCPKECGKDYNLYLQKLLSKGKNEIQKTMERSMER
SIO_010081: HMPREF0389_RS02035
subclass of: SO_0000673
so part of: HMPREF0389_RS02035
location: complement(450839..451816)
location: region:450839-451816:-1
so has part: feature:450839-451816:-1:exon

WP_014262076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450839-451816:-1:exon

HMPREF0389_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02040
so part of: sequence
location: complement(452221..452409)
location: region:452221-452409:-1
so has part: feature:452221-452409:-1:exon
subclass of: SO_0000010

position:452221:-1
position: 452221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452409:-1
position: 452409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452221-452409:-1:exon

HMPREF0389_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQKRTYKALVTTICTVTLLLPNVIYVTPIRILFSIKYIVVPSIIIYHSILENSLYFKGLCM
SIO_010081: HMPREF0389_RS02040
subclass of: SO_0000673
so part of: HMPREF0389_RS02040
location: complement(452221..452409)
location: region:452221-452409:-1
so has part: feature:452221-452409:-1:exon

WP_041250756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452221-452409:-1:exon

HMPREF0389_RS02045
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02045
old locus tag: HMPREF0389_00228
so part of: sequence
location: complement(452589..454310)
location: region:452589-454310:-1
so has part: feature:452589-454310:-1:exon
subclass of: SO_0000010

position:452589:-1
position: 452589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454310:-1
position: 454310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452589-454310:-1:exon

HMPREF0389_RS02045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02045
old locus tag: HMPREF0389_00228
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007594185.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MKNYYKKRFCLTDKGAENLVKATIACFFTYCVNLLPVFLLMMIVDQLVLNHVKSPIFYIIFATVTLILMYLLLSKEYINLYNATYEESANLRVGISETLADLPIAYFSKHNLSDLSQTIMSDVERIEHAISHSIPKVLGMGLFFPIMGILMMIGNVKMGLAVIIPTLVSFVFIPLGKKNRTNASTKYYDVLRENSESFQETIELQQEISSFNLTETFKDTLYRQMEESEKIHLKEELGSVLLLGISSLFAFVSVAVVILVGIILILNNEIDLLYLIGYIIGAIKVKELFDISKEGILELFYIDPAVERIREIKNTEVQQGKDVEIQNFNVEFRNVSFSYDADTEVLNDVSFVAKQNEVTALVGASGCGKTSILRLVSRLYDCTGGEILVGGQEIQNVSTDSLFQKISIVFQEVTLFNVSVMDNIRIGRKGATDEEVKKAAELANCMDFIQKLPNGFDTLIGENGAELSGGERQRLSIARAFLKDAPILILDEISASLDVDNEKKIQESLNKLIKNKTVIIISHRLKSIENVDKIVVIENGVVENIGTHAELMMKSKLYNNLVEKTKLAEEFVY
SIO_010081: HMPREF0389_RS02045
subclass of: SO_0000673
so part of: HMPREF0389_RS02045
location: complement(452589..454310)
location: region:452589-454310:-1
so has part: feature:452589-454310:-1:exon

WP_041250757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452589-454310:-1:exon

HMPREF0389_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02050
old locus tag: HMPREF0389_00227
so part of: sequence
location: complement(454294..456048)
location: region:454294-456048:-1
so has part: feature:454294-456048:-1:exon
subclass of: SO_0000010

position:454294:-1
position: 454294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456048:-1
position: 456048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454294-456048:-1:exon

HMPREF0389_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02050
old locus tag: HMPREF0389_00227
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016398247.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MDVYKKMFKYVPESKVNGYISIIMSAISAFVLVYGYYLMFECLRELIVNSDFENAKVYAIRIVIYFTLSAILYLVSGLFSHMLAFRLETNLRKKGIDGLMDASFRFFDLNASGFIRKTIDDNAAKTHTAVAHMLPDNTQAALVPILSLILSFAVSVRVGIIILVLSISCALLLKGMMGNGEFMKLYQASLDKLSAETVEYIRGMQVVKIFGTKVESFKSLYTAIMDYSKYAYQYSLSCKKPYVLYQWIFLGIIAIVSIPSAFFLTGLEEPKFVAVEFIMVFLLSGVMMVSFMKIMWAGMNIFNAGYAVKTLEELYDKMKVDKLCYGQRNIFENFNIEFENVTFAYNENKVLENVSFSLDEKKSYALVGHSGSGKSTIAKLLSGFYKVDSGVIKIGGYPLESYTKEAVVEVISFIFQDSKLFKKSIYENVSLADKNATREEVLNAMKLAGCDEIINKFPNKENTIIGSKGVYLSGGEKQRIAIARAILKKSNIIIMDEASASIDSDNEYELQKAFKNLMKDKTVIMIAHRLTSIKSVDEILVLEDGKIVERGNSKQLLEKNGLYHKLFALYNSANDWRVENEKLL
SIO_010081: HMPREF0389_RS02050
subclass of: SO_0000673
so part of: HMPREF0389_RS02050
location: complement(454294..456048)
location: region:454294-456048:-1
so has part: feature:454294-456048:-1:exon

WP_014262078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454294-456048:-1:exon

HMPREF0389_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02055
old locus tag: HMPREF0389_00226
so part of: sequence
location: complement(456841..458250)
location: region:456841-458250:-1
so has part: feature:456841-458250:-1:exon
subclass of: SO_0000010

position:456841:-1
position: 456841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458250:-1
position: 458250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456841-458250:-1:exon

HMPREF0389_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02055
old locus tag: HMPREF0389_00226
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005838525.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CoA-binding protein
translation: MKVNRSRKYVVDNLQYALNPKSIAVVGASRYNGKVGFKVIEGLLNWGYKGKIYPVNPRAEKVHGFDAYPTVQDIPHDVDLVFIAVPAHIVKSVLEDCVAKKAKIVVIATSAFKEIGRGDLQNQLTQYCRDHKLPMIGPNLVGMGSPYLHFNCGFIPYLPIEGPVAMISQSGANLLAALGTSQKDHFGMSFFVGLGNKADVDFCEFISYAGVDDNTKCLAVYIEGLDSPEAFIDACKSVNKPIVTIKVGGSKIGVKAAFAHTASENEGTTDKFYDEVFEKAGAIRATTWQEFLDVSLALGLQPPLQGDNIVMITNGGGSGLLSCDHFERCGLPLHELSEISPGLAGRIRAYMPMFGSPLNPVDISGTASPIQYKGAFHQAIRDPKVHGILGSICPTAVTDVGAVVDIVIELHEMYKHLNKPFIMECQGGEECQEAIMKLRDHGIPAYPTAEQSVNAMIALYKYGQIKKSK
SIO_010081: HMPREF0389_RS02055
subclass of: SO_0000673
so part of: HMPREF0389_RS02055
location: complement(456841..458250)
location: region:456841-458250:-1
so has part: feature:456841-458250:-1:exon

WP_014262079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456841-458250:-1:exon

HMPREF0389_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02060
old locus tag: HMPREF0389_00225
so part of: sequence
location: complement(458251..459468)
location: region:458251-459468:-1
so has part: feature:458251-459468:-1:exon
subclass of: SO_0000010

position:458251:-1
position: 458251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459468:-1
position: 459468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458251-459468:-1:exon

HMPREF0389_RS02060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02060
old locus tag: HMPREF0389_00225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005838524.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AsnC family transcriptional regulator
translation: MAEKHYTLGTEQQQEWMQDYFFPPRGIGFLEPGIVGLDSNEFSAYNVAKSFYQNYPEVFNLEYISKETGLSKEDIKKRISRMYKDKVIMLVMNPAVAVYGWGLYYWVVKLKDGTPKEVKQKLSEWFQNKDDICSGYETHGEFDYFNGNHMRVLDNLLYDVIGPWKDMPEVEYVHLCPIRRDVRESNVNMWDAHGDGYRKFVWGKEQVDKLLKYQKVIDASDFAIINAINSTKTVGDMFDYDVLEKLSGLNGKQMKKDFMEICDVRRFIVPMIYINHMKLGLTMKMYLVRLFQNVPSYRKAQIADELSDMPEFNNFWVFSDSFYDFMISSFTELTDWEELRQKIESYSEVEFVKLADSNRQFRRWVARLDDENGFWEECVFTDDFLQDRTAGNCIKCNFSKHEEVK
SIO_010081: HMPREF0389_RS02060
subclass of: SO_0000673
so part of: HMPREF0389_RS02060
location: complement(458251..459468)
location: region:458251-459468:-1
so has part: feature:458251-459468:-1:exon

WP_014262080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458251-459468:-1:exon

HMPREF0389_RS08695
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS08695
old locus tag: HMPREF0389_00224
so part of: sequence
location: complement(460612..460842)
location: region:460612-460842:-1
so has part: feature:460612-460842:-1:exon
subclass of: SO_0000010

position:460612:-1
position: 460612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460842:-1
position: 460842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460612-460842:-1:exon

HMPREF0389_RS08695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS08695
old locus tag: HMPREF0389_00224
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MELVVELKGGKKTIEYKWYRMKYGQNKFEFVGTGEGTNNTNKLKVNVKNVPYDYRCVMASKDNKVLSTIPVRVEKR
SIO_010081: HMPREF0389_RS08695
subclass of: SO_0000673
so part of: HMPREF0389_RS08695
location: complement(460612..460842)
location: region:460612-460842:-1
so has part: feature:460612-460842:-1:exon

WP_014262081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460612-460842:-1:exon

HMPREF0389_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02070
old locus tag: HMPREF0389_00223
so part of: sequence
location: complement(460904..462694)
location: region:460904-462694:-1
so has part: feature:460904-462694:-1:exon
subclass of: SO_0000010

position:460904:-1
position: 460904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462694:-1
position: 462694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460904-462694:-1:exon

HMPREF0389_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02070
old locus tag: HMPREF0389_00223
inference: COORDINATES: protein motif:HMM:NF012613.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-layer homology domain-containing protein
translation: MLKLKLKSFLKLIPILLITLLSTSVVFADLQNIIQNMLPFTDVKQGDWYYADVKIAYQNRLINGKTDTLFAPQDNMTAAEAVKLASCIHQLKNEGTVSLSAGVGTWYKPYVDYAKNKGLIDVDLDWNNKITRAGYMQIFARLITDEEARLNNVPDGSIPDVRMSHPSADAIYKLYRAGVVQGVDSNRNCSPMSYIKRSEVAAILTRMMDVNRRLQDFKITKEPENAKADLGTRVDLKVEVSGGKAPLSYQWEYLDEESGNFRNSTSEGNATDTLKAPVEEISYKYRCVITDATGKQVISKAAKVEKSNSGTLTVTKQPESKIGNVGQIVKLEVGVSGAKEPVTYQWEYSENLSGSFYKSEAIGNKTKELTVAIENKEYWYRCKIRDGAGQTVESGKVLVKVSGDSDNLFRITSQPIDMSASPGKLVMLGVAVTGGTQPYRYQWSYSENGRTNFFPSKAVGNKTNILKVPTERKTYYYQCEIKDDTGQALYSDIVKVTETSGAPFEIVRQPVGGYANYGEYFDLEVKVRGGREPYTYQWQYYDRNGFRNCTGPGNNEKMVKVIVDNSGIYKFPHRCVIKDADNKELITNPVVITLNE
SIO_010081: HMPREF0389_RS02070
subclass of: SO_0000673
so part of: HMPREF0389_RS02070
location: complement(460904..462694)
location: region:460904-462694:-1
so has part: feature:460904-462694:-1:exon

WP_014262082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460904-462694:-1:exon

HMPREF0389_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02075
old locus tag: HMPREF0389_00222
so part of: sequence
location: complement(463975..464748)
location: region:463975-464748:-1
so has part: feature:463975-464748:-1:exon
subclass of: SO_0000010

position:463975:-1
position: 463975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464748:-1
position: 464748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463975-464748:-1:exon

HMPREF0389_RS02075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02075
old locus tag: HMPREF0389_00222
inference: COORDINATES: protein motif:HMM:NF016973.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF695 domain-containing protein
translation: MSKKIKEIPQDWGMYLQGINEKPALTKTNLSLFRLAPIKSYDVRIQFAVYYMNQTESGLPSQEENPKLWEIEDALTEAIQCFDVIDVGLIKCEGAMNLFFYAKEKREELEQIEQSLIQTLSKEFEGYQWNIWFDTDKEWECYLETLYPNKYSMQEIKNNNVLEALQSEGDDFSKERLIEHWAYFETEEACLNFIKKVQSEHFQLFSDDVIDNGQYRYQAGVSRNDSLDDIDEITWYLLDTAEEFGGFYDGWGCGLMK
SIO_010081: HMPREF0389_RS02075
subclass of: SO_0000673
so part of: HMPREF0389_RS02075
location: complement(463975..464748)
location: region:463975-464748:-1
so has part: feature:463975-464748:-1:exon

WP_014262083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463975-464748:-1:exon

HMPREF0389_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02080
old locus tag: HMPREF0389_01684
so part of: sequence
location: complement(464924..465784)
location: region:464924-465784:-1
so has part: feature:464924-465784:-1:exon
subclass of: SO_0000010

position:464924:-1
position: 464924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465784:-1
position: 465784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464924-465784:-1:exon

HMPREF0389_RS02080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02080
old locus tag: HMPREF0389_01684
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009530377.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2262 domain-containing protein
translation: MSNVLKNPFNKTVEDFEKEFCGETFELLIVTVQDVSGAAALKDGYDRPCTHFTACVDVETNEFSTVEGRLEWLVSPEEKEEQGWIYTFEPYKIHHIRCRKRPPMTLEPYMAEVLNNCYALLDYIDDSVSDNRLEALIEEYLKPVVIKDTIGEFTLNRAYSWFEGSVDFNGNRVRVMLDANQDGDVPPKSFLYLKKFTENIEERDSKIREFIVKDLWETAEDWMDSEEEDDLTEEYFYKSLFLSDFSINEEGEMTLYYGDEKEIFAGHAIEVRMNAEGEIKNATLVG
SIO_010081: HMPREF0389_RS02080
subclass of: SO_0000673
so part of: HMPREF0389_RS02080
location: complement(464924..465784)
location: region:464924-465784:-1
so has part: feature:464924-465784:-1:exon

WP_014262084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464924-465784:-1:exon

HMPREF0389_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02085
old locus tag: HMPREF0389_00219
so part of: sequence
location: complement(466185..467213)
location: region:466185-467213:-1
so has part: feature:466185-467213:-1:exon
subclass of: SO_0000010

position:466185:-1
position: 466185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467213:-1
position: 467213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466185-467213:-1:exon

HMPREF0389_RS02085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02085
old locus tag: HMPREF0389_00219
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009528174.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGGRLIFISLISFLGISFLAIIAGMYFYMKRTVSGGKSLLDEAVNMEENTSRMTLGELLVYVSAILVALLFAVRLMDRGGSGFANLAKFIVLPPVMAFFNARKRTGRSVFVIMGAVIFSFYMFMVYIIIGVPVKAPVLTINDTEITMAHTTVSDIVADGFDIYIKQSDSPHRDYGTLLSSGIFQKYPCDRSVLVEKGFRRNSDSIYYSPYLLVKDGVVIGSIGLYGHKTEDIALEDCKIIHFKCDEDCVAAARAKAMHYRLDNMELLNPLKLETLQKTFDKKLWLFPPSNPTDVTQLHYGIKWSSGSDHLFWNEYYAYIHFDESNHMTEFEISTEVARDWNE
SIO_010081: HMPREF0389_RS02085
subclass of: SO_0000673
so part of: HMPREF0389_RS02085
location: complement(466185..467213)
location: region:466185-467213:-1
so has part: feature:466185-467213:-1:exon

WP_014262085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466185-467213:-1:exon

HMPREF0389_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02090
old locus tag: HMPREF0389_00218
so part of: sequence
location: complement(467535..468029)
location: region:467535-468029:-1
so has part: feature:467535-468029:-1:exon
subclass of: SO_0000010

position:467535:-1
position: 467535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468029:-1
position: 468029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467535-468029:-1:exon

HMPREF0389_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02090
old locus tag: HMPREF0389_00218
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009528489.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDGTKIIYLSILIILGVFFIKKMVNPPIGPRYKFKMIMFTIEAEERLKTTELGSHIFTSKSRSKLILPWEFDLWTQADLFENGIVLKRNRREKTVFFYEIYAIQPLLINSLFVKGKYFGYAFTLRENKEIILKSRDMHDLDVFIEKLCFLFPPEKGVAVIGDID
SIO_010081: HMPREF0389_RS02090
subclass of: SO_0000673
so part of: HMPREF0389_RS02090
location: complement(467535..468029)
location: region:467535-468029:-1
so has part: feature:467535-468029:-1:exon

WP_014262086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:467535-468029:-1:exon

HMPREF0389_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02095
old locus tag: HMPREF0389_00217
so part of: sequence
location: complement(468553..469272)
location: region:468553-469272:-1
so has part: feature:468553-469272:-1:exon
subclass of: SO_0000010

position:468553:-1
position: 468553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469272:-1
position: 469272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468553-469272:-1:exon

HMPREF0389_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02095
old locus tag: HMPREF0389_00217
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKQWIFITALMTIPVIFGACNNLSKNSDASYEDDSGSKNNIAVHQVAQEDKNIQEADLHKIFQKNIVNGNRELSFLCADYDNDGTLEAFGVSADESTAADERVAKLYFINGKGNCEEIPYPKKEDFVVETWVKNDFVGDGEIVGQDDEKFFVWIENFGGPGSLAHVFGVKDGKYFRTNISGEVEDFAISEDGLYVGTTSFFKDIDSPDFAGREWMLHYFNYDNTKDEFIEIRSEPADV
SIO_010081: HMPREF0389_RS02095
subclass of: SO_0000673
so part of: HMPREF0389_RS02095
location: complement(468553..469272)
location: region:468553-469272:-1
so has part: feature:468553-469272:-1:exon

WP_041250759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468553-469272:-1:exon

HMPREF0389_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02100
old locus tag: HMPREF0389_00216
so part of: sequence
location: 469793..470926
location: region:469793-470926:1
so has part: feature:469793-470926:1:exon
subclass of: SO_0000010

position:469793:1
position: 469793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470926:1
position: 470926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469793-470926:1:exon

HMPREF0389_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02100
old locus tag: HMPREF0389_00216
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKKMFQTGRGFAIIKAILLAIIIVFFSVLGMFMVKLNFTGEHVEDAHTFGDYVYLDAVYASDLFGTDHAGNRYMFVSIKDEEKDEMHDYMFGISEKDFVETGLDKLVEATYSKEPIEIQPIHLTAYIEKSDAELDKLASEAYIHYVGDETITDPMEYLGNFCLVYSNDSALQRMGFGDWIMYLFVAIIIIMSAFEMVKIIKKQMKKENKIALCKELYERDKEYAQGLSEVDMSDTVFYKQLKCYITPNYIVTFQDGLEVFRIEDIKELYGYDEVNHSVLLGILFGWFASRRSNHYLAAVTSDNELHLFAKTSMVGKLHNQVVSHLIQKNPEILLGRKGVAVSDLEQDLTNLKLSKISGFYGDSSVWKGRVKETFIS
SIO_010081: HMPREF0389_RS02100
subclass of: SO_0000673
so part of: HMPREF0389_RS02100
location: 469793..470926
location: region:469793-470926:1
so has part: feature:469793-470926:1:exon

WP_041250760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469793-470926:1:exon

HMPREF0389_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02105
old locus tag: HMPREF0389_00215
so part of: sequence
location: complement(471013..471873)
location: region:471013-471873:-1
so has part: feature:471013-471873:-1:exon
subclass of: SO_0000010

position:471013:-1
position: 471013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471873:-1
position: 471873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471013-471873:-1:exon

HMPREF0389_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02105
old locus tag: HMPREF0389_00215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005922541.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MAKKDSNFQVKFMSFVFRGKEIFKPLNTGFIDEKVGCIREYVANVYFYTKDGHTIMIDAGYNYDRLAEKMRWIHINPKDIKDILITHQDTDHVGAIETDSDRLFSEATIYIGKIENEYLEGRKCRKVFWGLHKLPQVNIDNKKVLIDDGQVFYLGNIKIEAFLVPGHSWGHLVYLIDDVYLFTGDTIWFGADGGYAFLNTLAEDRKLQVKSLKRLEEILRKRNLKLKIITGHTGWTDDIDFAFAHTDEICNALRRKPKVHDSKAPYDGFDESDDTEENVKKGYLKM
SIO_010081: HMPREF0389_RS02105
subclass of: SO_0000673
so part of: HMPREF0389_RS02105
location: complement(471013..471873)
location: region:471013-471873:-1
so has part: feature:471013-471873:-1:exon

WP_014262089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471013-471873:-1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 546269
inference: COORDINATES: alignment:crt:1.2
inference: COORDINATES: alignment:pilercr:v1.02
rpt family: CRISPR
rpt type: direct
rpt unit range: 472221..472256
rpt unit seq: gtttgactaccatatgaaattacactactctcaaac
so part of: sequence
location: 472155..473908
location: region:472155-473908:1
so has part: feature:472155-473908:1:region

position:472155:1
position: 472155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473908:1
position: 473908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472155-473908:1:region

HMPREF0389_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: csn2
locus tag: HMPREF0389_RS02110
old locus tag: HMPREF0389_00213
so part of: sequence
location: complement(473962..474630)
location: region:473962-474630:-1
so has part: feature:473962-474630:-1:exon
subclass of: SO_0000010

position:473962:-1
position: 473962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474630:-1
position: 474630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473962-474630:-1:exon

HMPREF0389_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: csn2
locus tag: HMPREF0389_RS02110
old locus tag: HMPREF0389_00213
inference: COORDINATES: protein motif:HMM:TIGR01866.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II-A CRISPR-associated protein Csn2
translation: MNLVYYDLNMDIELEEERLNFLVIENPVKLEDFVLSIHSAKQKITEDVSIFEKFEKINFAKQVDILFSPMSISYHTKEIQKKLLEYVLEKVQDSYLAEDFIDISGSLVSLCSKIYLELEYDIEYLDYVEVEDILKLMDIRLKEEEGRFVERLIDYSKTMFELLHKNIFILVGCSGFLTKIDFEYLRQHQFSQKILFLFVESHQIDLESPKKQTIIDIDLCEI
SIO_010081: HMPREF0389_RS02110
subclass of: SO_0000673
so part of: HMPREF0389_RS02110
location: complement(473962..474630)
location: region:473962-474630:-1
so has part: feature:473962-474630:-1:exon

WP_014262091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473962-474630:-1:exon

HMPREF0389_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: cas2
locus tag: HMPREF0389_RS02115
old locus tag: HMPREF0389_00212
so part of: sequence
location: complement(474627..474932)
location: region:474627-474932:-1
so has part: feature:474627-474932:-1:exon
subclass of: SO_0000010

position:474627:-1
position: 474627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474932:-1
position: 474932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474627-474932:-1:exon

HMPREF0389_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: cas2
locus tag: HMPREF0389_RS02115
old locus tag: HMPREF0389_00212
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262092.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endonuclease Cas2
translation: MRIIVFFDLPTITLEDKRDYRDFRKFLIKKGFLMMQESVYCKLVLNQTVASSVLSSIRKHKPKSGLVQMIMVTEKQFAKMEYLCGEKRSNVVDSDDRLVIL
SIO_010081: HMPREF0389_RS02115
subclass of: SO_0000673
so part of: HMPREF0389_RS02115
location: complement(474627..474932)
location: region:474627-474932:-1
so has part: feature:474627-474932:-1:exon

WP_014262092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474627-474932:-1:exon

HMPREF0389_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: cas1
locus tag: HMPREF0389_RS02120
old locus tag: HMPREF0389_00211
so part of: sequence
location: complement(474937..475815)
location: region:474937-475815:-1
so has part: feature:474937-475815:-1:exon
subclass of: SO_0000010

position:474937:-1
position: 474937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475815:-1
position: 475815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474937-475815:-1:exon

HMPREF0389_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: cas1
locus tag: HMPREF0389_RS02120
old locus tag: HMPREF0389_00211
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005609676.1
GO function: GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II CRISPR-associated endonuclease Cas1
translation: MSWREVIITGHAKLDYKMDYLVVRKQDGTDRVYIPDIGFLMIESTRVSLTTTLISELVKNKVKIIFCDANHNPQSELLPYHGSHDTSLKVREQVSWSDEIKQLVWTEIVKEKIKNQMELLEEYQNFDRAELLKTYIEEMEPGDKNNREGHAAKVYFNTVFGIDFTRNDENTINAALNYGYNILLSCFNREIVSNGYLTQIGLWHSSRFNSFNLASDLMEPFRIIVDRKVLTLNLENFDSHNKYELVSILNGEVRIDSKVSYVNNAIKLYCKSIFEALHYEDTSYIKFYTNEL
SIO_010081: HMPREF0389_RS02120
subclass of: SO_0000673
so part of: HMPREF0389_RS02120
location: complement(474937..475815)
location: region:474937-475815:-1
so has part: feature:474937-475815:-1:exon

WP_014262093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474937-475815:-1:exon

HMPREF0389_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: cas9
locus tag: HMPREF0389_RS02125
old locus tag: HMPREF0389_00210
so part of: sequence
location: complement(475812..479909)
location: region:475812-479909:-1
so has part: feature:475812-479909:-1:exon
subclass of: SO_0000010

position:475812:-1
position: 475812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479909:-1
position: 479909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475812-479909:-1:exon

HMPREF0389_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: cas9
locus tag: HMPREF0389_RS02125
old locus tag: HMPREF0389_00210
inference: COORDINATES: protein motif:HMM:TIGR01865.1
GO component: GO:0005575 - cellular_component [Evidence IEA]
GO function: GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Cas9, originally named Csn1, is the large, multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II CRISPR RNA-guided endonuclease Cas9
translation: MTKEYYLGLDVGTNSVGWAVTDSQYNLCKFKKKDMWGIRLFESANTAKDRRLQRGNRRRLERKKQRIDLLQEIFSPEICKIDPTFFIRLNESRLHLEDKSNDFKYPLFIEKDYSDIEYYKEFPTIFHLRKHLIESEEKQDIRLIYLALHNIIKTRGHFLIDGDLQSAKQLRPILDTFLLSLQEEQNLSVSLSENQKDEYEEILKNRSIAKSEKVKKLKNLFEISDELEKEEKKAQSAVIENFCKFIVGNKGDVCKFLRVSKEELEIDSFSFSEGKYEDDIVKNLEEKVPEKVYLFEQMKAMYDWNILVDILETEEYISFAKVKQYEKHKTNLRLLRDIILKYCTKDEYNRMFNDEKEAGSYTAYVGKLKKNNKKYWIEKKRNPEEFYKSLGKLLDKIEPLKEDLEVLTMMIEECKNHTLLPIQKNKDNGVIPHQVHEVELKKILENAKKYYSFLTETDKDGYSVVQKIESIFRFRIPYYVGPLSTRHQEKGSNVWMVRKPGREDRIYPWNMEEIIDFEKSNENFITRMTNKCTYLIGEDVLPKHSLLYSKYMVLNELNNVKVRGKKLPTSLKQKVFEDLFENKSKVTGKNLLEYLQIQDKDIQIDDLSGFDKDFKTSLKSYLDFKKQIFGEEIEKESIQNMIEDIIKWITIYGNDKEMLKRVIRANYSNQLTEEQMKKITGFQYSGWGNFSKMFLKGISGSDVSTGETFDIITAMWETDNNLMQILSKKFTFMDNVEDFNSGKVGKIDKITYDSTVKEMFLSPENKRAVWQTIQVAEEIKKVMGCEPKKIFIEMARGGEKVKKRTKSRKAQLLELYAACEEDCRELIKEIEDRDERDFNSMKLFLYYTQFGKCMYSGDDIDINELIRGNSKWDRDHIYPQSKIKDDSIDNLVLVNKTYNAKKSNELLSEDIQKKMHSFWLSLLNKKLITKSKYDRLTRKGDFTDEELSGFIARQLVETRQSTKAIADIFKQIYSSEVVYVKSSLVSDFRKKPLNYLKSRRVNDYHHAKDAYLNIVVGNVYNKKFTSNPIQWMKKNRDTNYSLNKVFEHDVVINGEVIWEKCTYHEDTNTYDGGTLDRIRKIVERDNILYTEYAYCEKGELFNATIQNKNGNSTVSLKKGLDVKKYGGYFSANTSYFSLIEFEDKKGDRARHIIGVPIYIANMLEHSPSAFLEYCEQKGYQNVRILVEKIKKNSLLIINGYPLRIRGENEVDTSFKRAIQLKLDQKNYELVRNIEKFLEKYVEKKGNYPIDENRDHITHEKMNQLYEVLLSKMKKFNKKGMADPSDRIEKSKPKFIKLEDLIDKINVINKMLNLLRCDNDTKADLSLIELPKNAGSFVVKKNTIGKSKIILVNQSVTGLYENRREL
SIO_010081: HMPREF0389_RS02125
subclass of: SO_0000673
so part of: HMPREF0389_RS02125
location: complement(475812..479909)
location: region:475812-479909:-1
so has part: feature:475812-479909:-1:exon

WP_014262094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475812-479909:-1:exon

HMPREF0389_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02130
old locus tag: HMPREF0389_00209
so part of: sequence
location: complement(480915..482150)
location: region:480915-482150:-1
so has part: feature:480915-482150:-1:exon
subclass of: SO_0000010

position:480915:-1
position: 480915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482150:-1
position: 482150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480915-482150:-1:exon

HMPREF0389_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02130
old locus tag: HMPREF0389_00209
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008395273.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MSARKDNKGRALRKGEIYRESDGRYAYGYVDPYGNRKFIYSKDLKKLREREERLIKDQLDGLDVYVAGNASLNFVFDRYISTKSELRETTYTNYMYMYNHFVREGFGKKKIGEIKYSDVLYFYYDLLNNRELQVNTLETIHTVLHPTFQLAVRDDIIRNNPSDGVMAEIKKKNTKKKNMRHALTIEQQRAFMNYIASSPVFVHWNPIFTVLLGTGCRIGEVVGLRWSDIDMEKRTIDINHSMTYYPRKTDTYKCEFKVSLPKTEAGVRILPMMQPVYEALETEYERQKEEGFCTAVVDGMSGFVFSNRFGMIHNPAAINRVIRRILEAHNTEEIVKAKKEKREPIMIPHFSCHHLRHTFCSRFCENETNIKVIQEIMGHASIETTMDIYAEANSDKKKESIENLAKNLDIF
SIO_010081: HMPREF0389_RS02130
subclass of: SO_0000673
so part of: HMPREF0389_RS02130
location: complement(480915..482150)
location: region:480915-482150:-1
so has part: feature:480915-482150:-1:exon

WP_014262095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480915-482150:-1:exon

HMPREF0389_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02135
old locus tag: HMPREF0389_00208
so part of: sequence
location: complement(482197..482373)
location: region:482197-482373:-1
so has part: feature:482197-482373:-1:exon
subclass of: SO_0000010

position:482197:-1
position: 482197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482373:-1
position: 482373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482197-482373:-1:exon

HMPREF0389_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02135
old locus tag: HMPREF0389_00208
inference: COORDINATES: protein motif:HMM:NF039402.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6290 family protein
translation: MGKMGRPLVDDPKFHRVTVRMTEGEYQELKEYAKTHNLTMSQAVKSGIKKLYCNSLKK
SIO_010081: HMPREF0389_RS02135
subclass of: SO_0000673
so part of: HMPREF0389_RS02135
location: complement(482197..482373)
location: region:482197-482373:-1
so has part: feature:482197-482373:-1:exon

WP_014262096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482197-482373:-1:exon

HMPREF0389_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02140
old locus tag: HMPREF0389_00207
so part of: sequence
location: complement(482454..482651)
location: region:482454-482651:-1
so has part: feature:482454-482651:-1:exon
subclass of: SO_0000010

position:482454:-1
position: 482454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482651:-1
position: 482651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482454-482651:-1:exon

HMPREF0389_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02140
old locus tag: HMPREF0389_00207
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262097.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6462 family protein
translation: MKNKVNHKRFVRYKEGAELYSMCQTKFEEMAKEAGAVYKLNKLVLVNCDILDEYLETFRLIPYQT
SIO_010081: HMPREF0389_RS02140
subclass of: SO_0000673
so part of: HMPREF0389_RS02140
location: complement(482454..482651)
location: region:482454-482651:-1
so has part: feature:482454-482651:-1:exon

WP_014262097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482454-482651:-1:exon

HMPREF0389_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02145
old locus tag: HMPREF0389_00206
so part of: sequence
location: complement(483135..483551)
location: region:483135-483551:-1
so has part: feature:483135-483551:-1:exon
subclass of: SO_0000010

position:483135:-1
position: 483135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483551:-1
position: 483551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483135-483551:-1:exon

HMPREF0389_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02145
old locus tag: HMPREF0389_00206
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001051310.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma factor-like helix-turn-helix DNA-binding protein
translation: MKKEFYLYVNGQKVKVSEEIYKVYWREREHEKYLEQVDRKNHLLFFSSLDQDGHFAENIIDESVDVEKIVETQMMIEAVRNAISRLNAEERDIIERLYFQDETLSSIARRKKVSYQAIQWRKNNILKKLKLLLEDFLR
SIO_010081: HMPREF0389_RS02145
subclass of: SO_0000673
so part of: HMPREF0389_RS02145
location: complement(483135..483551)
location: region:483135-483551:-1
so has part: feature:483135-483551:-1:exon

WP_014262098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483135-483551:-1:exon

HMPREF0389_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02150
old locus tag: HMPREF0389_00205
so part of: sequence
location: complement(483868..486381)
location: region:483868-486381:-1
so has part: feature:483868-486381:-1:exon
subclass of: SO_0000010

position:483868:-1
position: 483868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486381:-1
position: 486381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483868-486381:-1:exon

HMPREF0389_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02150
old locus tag: HMPREF0389_00205
inference: COORDINATES: protein motif:HMM:NF014717.2
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MRNINNRKWISNISKKSMKANRKRNLILILAISLTAFMVTAVFTVAGSMITGMEKSTMYQVGSDFHAGFKFLTQKQYDKLSRDNKISELSYSIIVGQSTNEELREDYTEIRYTGEGNAKHSFSFPEIGTLPQKENEIATCINVLDDFGLSHEIGQTIRLQIDNGIDTYEGEFLVSGIWKKPTATLANQIYVSKEFQEKFSPTWQNEVDMKKFMDVDSYAGSINPGFNFNNAFNISGKMDELKMRLDFGKEINEGVNWAYSTSSIDPTSMALMIFLLFIIMISGYLIISNIFNISITADIHHYGLLKTIGTTNIQLKKIVIRQAIMISIIAIPIGLLIGYLASMIMIPLIISNMISIPVTMKFNIWFFVVSGIFSWITVRISCIRPCRIVKKISPVEAVRYIGYSNSIKRKNKRTHKVTPVTMAWQNIGRNKKKTISVILSMALSIIMLNITVSLVASFDEDKYVSSFASSDFTVADASLFDRYLKAVENEGVSESNIEYCKKMNGIEDIGAVYMSTGFHKVDGSVLKKVLNFYETIKNKINSDEAKELETRIFDSHEIYSCVYGIDQIVYDKLEMDAGKLDWEKFKTGKYVVISAPIEGSKDDAEVAFYKIGDNINVEMPDGSTKSYEVIGIGKIPYAMGSGYSFTIDINIMLPSEEYLAHSQSKGAMKLFMNVDDDNIDKVEASLTEYCENIKPLLDFESRNKYKEGFKEMQQTFLLIGSAMSLILALIGILNFINLTYTSINERSRELMTLHAVGMTYKQIKNMLSAEGVIRIIFTFIAVFTIGIGLNRTIVNMIAGQMIMFKYQFVVWPMLVSIPIFLLIAVVIPKMFSWQNRA
SIO_010081: HMPREF0389_RS02150
subclass of: SO_0000673
so part of: HMPREF0389_RS02150
location: complement(483868..486381)
location: region:483868-486381:-1
so has part: feature:483868-486381:-1:exon

WP_014262099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483868-486381:-1:exon

HMPREF0389_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02155
old locus tag: HMPREF0389_00204
so part of: sequence
location: complement(486374..487060)
location: region:486374-487060:-1
so has part: feature:486374-487060:-1:exon
subclass of: SO_0000010

position:486374:-1
position: 486374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487060:-1
position: 487060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486374-487060:-1:exon

HMPREF0389_RS02155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02155
old locus tag: HMPREF0389_00204
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018597102.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MEVLKTKSLKKYYSPSEVIVKAIDGVDISVSHGEFVAIVGSSGSGKSTLLNMLGGLDRPTDGSVLVDGKDIFSFKDEELTIFRRRKIGFVFQAFNLVPVLNVYENIVLPIELDGNEVDEDYVNEIINALGLGEKVSSMPNQLSGGQQQRVAIARALATKPSIVLADEPTGNLDSKTSQDVIGLLKVTSKKIHQTVVIITHNEEIAQTADRIIRIEDGRVVSKGGGFDA
SIO_010081: HMPREF0389_RS02155
subclass of: SO_0000673
so part of: HMPREF0389_RS02155
location: complement(486374..487060)
location: region:486374-487060:-1
so has part: feature:486374-487060:-1:exon

WP_014262100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486374-487060:-1:exon

HMPREF0389_RS02160
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02160
old locus tag: HMPREF0389_00203
so part of: sequence
location: complement(487140..487991)
location: region:487140-487991:-1
so has part: feature:487140-487991:-1:exon
subclass of: SO_0000010

position:487140:-1
position: 487140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487991:-1
position: 487991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487140-487991:-1:exon

HMPREF0389_RS02160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02160
old locus tag: HMPREF0389_00203
inference: COORDINATES: protein motif:HMM:NF014567.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MFGKNEYDALNKMLDSAISGDFKEERFDETELSKFQTKFMRYLTGSSMSEKKIREEKDKLKQLITDISHQTKTPLTNIIMYSELLNEVAEDIGIKEYAMEISFHSKKLGELINALTKMSRLEGGMFQFKERDVLIKQIVTNVMNQAYPKASCKNIKIDLDVDSGLMIKADEKWVIEAVFNILDNAVKYSEDNTKIKIHTFCYEMFCGISITDQGQGISEDEIPKIFSRFYRGSLARDKEGIGVGLFLSRNIIEGHGGYIKVKSKVGVGSTFDICFPNLSIMKD
SIO_010081: HMPREF0389_RS02160
subclass of: SO_0000673
so part of: HMPREF0389_RS02160
location: complement(487140..487991)
location: region:487140-487991:-1
so has part: feature:487140-487991:-1:exon

WP_014262101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487140-487991:-1:exon

HMPREF0389_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02165
old locus tag: HMPREF0389_00202
so part of: sequence
location: complement(487995..488651)
location: region:487995-488651:-1
so has part: feature:487995-488651:-1:exon
subclass of: SO_0000010

position:487995:-1
position: 487995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488651:-1
position: 488651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487995-488651:-1:exon

HMPREF0389_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02165
old locus tag: HMPREF0389_00202
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013624381.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MKRKIYIIEDDSSINRGIELTLGSKEYDFVNFYNLSDVKDIQCADLIILDINLPDGNGLDFLKEIRKYSRKPVLILTANDTEIGEVEGLQLGADDYVTKPFSLMALRLRIEKLLSRSTGDNAYRKYGLDLDFDSFVFKSNGIEFELSKTEIRLLKYLVENEGVILSREKLIDHVWQNQMFVDENALSVAIKRLRDKIDNGEAKLIHTVYGLGYVFRLE
SIO_010081: HMPREF0389_RS02165
subclass of: SO_0000673
so part of: HMPREF0389_RS02165
location: complement(487995..488651)
location: region:487995-488651:-1
so has part: feature:487995-488651:-1:exon

WP_014262102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487995-488651:-1:exon

HMPREF0389_RS09075
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS09075
old locus tag: HMPREF0389_00201
so part of: sequence
location: complement(488648..488911)
location: region:488648-488911:-1
so has part: feature:488648-488911:-1:exon
subclass of: SO_0000010

position:488648:-1
position: 488648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488911:-1
position: 488911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488648-488911:-1:exon

HMPREF0389_RS09075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS09075
old locus tag: HMPREF0389_00201
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004604517.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MIKNNIELDVKTKCIEAEITQAKLSKQINTSAPYVNRVIRNKETIVNNTFVKIMEALGYDIELRYIKRNECERKNKCSNNFKEIIEI
SIO_010081: HMPREF0389_RS09075
subclass of: SO_0000673
so part of: HMPREF0389_RS09075
location: complement(488648..488911)
location: region:488648-488911:-1
so has part: feature:488648-488911:-1:exon

WP_014262103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:488648-488911:-1:exon

HMPREF0389_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02175
old locus tag: HMPREF0389_00200
so part of: sequence
location: 489246..490241
location: region:489246-490241:1
so has part: feature:489246-490241:1:exon
subclass of: SO_0000010

position:489246:1
position: 489246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490241:1
position: 490241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489246-490241:1:exon

HMPREF0389_RS02175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02175
old locus tag: HMPREF0389_00200
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNVCYNIKNASRAKQSDLIKALSIYSKTVDKFAQTDTNQIMDYISKRYDENRIMFFFVLYLNGEVCGFAEYAYLKKNKVLMLDYLCTESRNHTLFYNFYQMIFEEINRTLNSKQLFIEFIVTELSLLKHGKKLIETDSNYFRQVLSFEQFHILNIPYKQPCMGKTLEFFEYSLAIKKADSCEDNSYVYNKNFYMSLISEIYEEHYLQWYLHYTDNKKEIIETFNNSLALLNNEYPPEAYVEEIYSVNCRLFDKGICNQIKPETITLSKQKKKNIRKYLVCVIWVALSLSSILLCYFQDELSITKYISTLVNAITMITGIIALLTIVKNKIT
SIO_010081: HMPREF0389_RS02175
subclass of: SO_0000673
so part of: HMPREF0389_RS02175
location: 489246..490241
location: region:489246-490241:1
so has part: feature:489246-490241:1:exon

WP_014262104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489246-490241:1:exon

HMPREF0389_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02180
old locus tag: HMPREF0389_00199
so part of: sequence
location: complement(490400..490957)
location: region:490400-490957:-1
so has part: feature:490400-490957:-1:exon
subclass of: SO_0000010

position:490400:-1
position: 490400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490957:-1
position: 490957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490400-490957:-1:exon

HMPREF0389_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02180
old locus tag: HMPREF0389_00199
inference: COORDINATES: protein motif:HMM:NF017001.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MSDLLKGNKVQKTAYRNYKNNNPWPVNDTWHYATHLIIEKFVANWVNQHTYEKSICLNIGSGLSKYPVKGTLIQMDIISEYVENEPNYIVGSLEDIPIEDNSVEFIICVGSVLNYCDAIRSINEIKRVLKKNGKALIEFERSNSAEFLLTKDYGSAVFLKKYNYNNQEHLLWMYSEKYIKKNIIA
SIO_010081: HMPREF0389_RS02180
subclass of: SO_0000673
so part of: HMPREF0389_RS02180
location: complement(490400..490957)
location: region:490400-490957:-1
so has part: feature:490400-490957:-1:exon

WP_014262105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490400-490957:-1:exon

HMPREF0389_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02185
old locus tag: HMPREF0389_00198
so part of: sequence
location: complement(490967..491890)
location: region:490967-491890:-1
so has part: feature:490967-491890:-1:exon
subclass of: SO_0000010

position:490967:-1
position: 490967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491890:-1
position: 491890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490967-491890:-1:exon

HMPREF0389_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02185
old locus tag: HMPREF0389_00198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019851323.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MNLENLVDEYLKVCENQNNLNYKTVKSYKLDLKQYMVFLDKEENYYRKEILCKYIEMLHTKDYRVKTIKRKIATLKAFFSYLVYEDILEYNPFVKIRLRLKEPVILPKTIPIVYLENLFKCLYDERDNADKNTYKYKALSRDIIILEILISTGIRISELCDLRKEQISYSERMIRIYGKGDKERILPVYNENLWKEIKQYEELFGLEIKGYFFINRINNKLSDQSVRNMIKKNCKKASIPINITPHMFRHTFATLLLENDVDSRNIQQILGHSSITTTQIYTNITSNKKIEIMKYKNPRLKISTNKG
SIO_010081: HMPREF0389_RS02185
subclass of: SO_0000673
so part of: HMPREF0389_RS02185
location: complement(490967..491890)
location: region:490967-491890:-1
so has part: feature:490967-491890:-1:exon

WP_014262106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490967-491890:-1:exon

HMPREF0389_RS02190
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02190
old locus tag: HMPREF0389_00197
so part of: sequence
location: 492105..492473
location: region:492105-492473:1
so has part: feature:492105-492473:1:exon
subclass of: SO_0000010

position:492105:1
position: 492105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492473:1
position: 492473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492105-492473:1:exon

HMPREF0389_RS02190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02190
old locus tag: HMPREF0389_00197
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009662915.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANRYRNNGIYLMLSDDELEILNKKYELSGCKTLRQFMMKCILEKDIFVLDMKVFKEMSTNIGRITGSINQIAKRVNSTSIIYKDDINDLKKLLEKQGKDIYFLRKKLYELGNLGTTNTEEI
SIO_010081: HMPREF0389_RS02190
subclass of: SO_0000673
so part of: HMPREF0389_RS02190
location: 492105..492473
location: region:492105-492473:1
so has part: feature:492105-492473:1:exon

WP_014262107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492105-492473:1:exon

HMPREF0389_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02195
old locus tag: HMPREF0389_00196
so part of: sequence
location: 492473..493846
location: region:492473-493846:1
so has part: feature:492473-493846:1:exon
subclass of: SO_0000010

position:493846:1
position: 493846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492473-493846:1:exon

HMPREF0389_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02195
old locus tag: HMPREF0389_00196
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262108.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MAVTKIHPIEKTLYLALDYIMNEDKTDEKILISSFGCNPKTAHLEFEQTKKECNSKAKILARHLIQAFAPGETTPEQAHQIGLELCERVLQGKYEYVLTTHIDKGHLHNHILFNNVSFETGKAYQSNKRSYHQIRTVSDDLCKENGLSVIDENYKRFKNRYSTNGKSYMEYTEFKRGTSWKNKLQIAIDKAVLKSKTYEEFLKTMEDFGYEIKIGKYLSFRHKDKRDKGRFTRAKASTLGKDYTKERIKERIKDPNKHHIYANQEYHYEKLSYKKPDTIVDMKNNEKVKSSKGYEVWAGKHNMKTMASALNEMRKSGVNSYEELDLKLKKVASDRQQLLDKIKHIEKEMKFIYSVIENKNTISENQLIYDMYMKDKENKAFYEEYKSQIIAYETAMKGSKNFKYQTLSIQNLSDKYMLLEQEKTTLMGEYSSQNSMLHKLGQAKKNTDLYLDNHLEK
SIO_010081: HMPREF0389_RS02195
subclass of: SO_0000673
so part of: HMPREF0389_RS02195
location: 492473..493846
location: region:492473-493846:1
so has part: feature:492473-493846:1:exon

WP_014262108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492473-493846:1:exon

HMPREF0389_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02200
old locus tag: HMPREF0389_00195
so part of: sequence
location: complement(493924..494442)
location: region:493924-494442:-1
so has part: feature:493924-494442:-1:exon
subclass of: SO_0000010

position:493924:-1
position: 493924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494442:-1
position: 494442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493924-494442:-1:exon

HMPREF0389_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02200
old locus tag: HMPREF0389_00195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005541962.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIGLVIIFIALIIIYLGVILFAGATFVKISLFALDKLVVFIASWYYTHHYFSVKFSSGYAMYFWDVLAAILAVIIYSALFKMIHRKLGLLGKILNFAISFLSSMTVYCILVNGFITKGTDYFLPLLNHDIANQVVNYIIITIIALVVWKRREEFLEEKEEFKEYYIVEKSDE
SIO_010081: HMPREF0389_RS02200
subclass of: SO_0000673
so part of: HMPREF0389_RS02200
location: complement(493924..494442)
location: region:493924-494442:-1
so has part: feature:493924-494442:-1:exon

WP_014262109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:493924-494442:-1:exon

HMPREF0389_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02205
old locus tag: HMPREF0389_00194
so part of: sequence
location: complement(494607..495566)
location: region:494607-495566:-1
so has part: feature:494607-495566:-1:exon
subclass of: SO_0000010

position:494607:-1
position: 494607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495566:-1
position: 495566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494607-495566:-1:exon

HMPREF0389_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02205
old locus tag: HMPREF0389_00194
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262110.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLEKGDIVKTALSENTTVLDVKDNQAILFSGTQFVLATGIKENKESGKFEWDNGRYANDLKSISDMQNNNFETMKETLSFLAEYNHSDFVKGIISLETGIENEDTLDVAYDNYMNDKIMGLVDEKFYDYIDENEMEAPDLESGRENKNSALSGEENVKEDKSTINDKSNENNEKANTININGNIASDIDIKNLTSKDGKDFTVASFAIAENDKEGNVKYTNCLAYNDKVSSVENLKKGDFVHIFGKEKISQGKDGKKYLSLKVYSAKLLKAKEQVKTNQNTKETKKPSALGKLKEYKEKAGEKPREQSGIKKEKNVER
SIO_010081: HMPREF0389_RS02205
subclass of: SO_0000673
so part of: HMPREF0389_RS02205
location: complement(494607..495566)
location: region:494607-495566:-1
so has part: feature:494607-495566:-1:exon

WP_014262110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494607-495566:-1:exon

HMPREF0389_RS09125
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS09125
old locus tag: HMPREF0389_00193
so part of: sequence
location: complement(495697..507453)
location: region:495697-507453:-1
so has part: feature:495697-507453:-1:exon
subclass of: SO_0000010

position:495697:-1
position: 495697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507453:-1
position: 507453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495697-507453:-1:exon

HMPREF0389_RS09125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS09125
old locus tag: HMPREF0389_00193
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: helicase-related protein
translation: MNDLIKNYENIPDELKKEKRWCLYKIISRDGKNTKLPLMPNGKPAKSNEKTTWNFYEDCIAALNRNIGDGLGFMLGDGYIGIDIDKVSDDIFVYSMDYQARSMTADFLRGISTYAELSPSKTGLHFIGKGKVPGERKRHKNLEIYDEGRFFTVTGNVIKDKDRSHIKPIEQELLPLYQQYMPAMGNQIEHKQASNEQAKRSTKENHFIQRYRQSSNDVLELLFEKGYFHYTGEDLRRIYYGNYESYFNSRSEADFFMLGRLLYYTADVEQAISLMENSGLKREKWYKRRGNTDYIHYIAGKAIGSMNKFYDWEKEYSQKEQSEWKRHENKEVKEGNTMPRYGFSEVKQILDFAKEEFRENIDRYETYLKVVGNNYKYPYFNQLSIYTVNEKATACAEYDYWKSIGRNVSRGEKGIPVLDIERERIKYIFDVSQTVSLNHNISEVKLWKYHNEKHIAALDTLIDAFKEKNSSLIFSTKDKINTLVSLYTRQILNKVLNSLNDETLKENSKVNILHFLEESAKVSVYERMGLHFLGDREKLKLLSGVSSTQDIDRLLAYASNNVKRILTDIGREISKVEEREKFSEIQKREQTNSFKERYNNSTDEMNGTTENIETEERNKGGLEDERNRSTGEERIPSGGRDLYTDRKRESVRETGRDLQTGEDGGRIGSVNSEYETAGETELKQTEPIWQSETEISQRGKRRRLSDYADGRNADESSVGHSGTSGEFPKYRRAENESGLGDDHRNAGSGLFEVRSFEEKLGYDTDKDGDGTNRLGIDEHHEENKQKIEQDHIGNEGKEVDRASFSFAQNVGIQGRFELPMQQEEIDAVLIHGGNEDHLRLKILAEYSKGKSVEELADFLQRNFQGGNGYEVEGNKVCAWYDTEGIYLSNDVSSREEPSQILLWEEAAKRIGELIDKGEYATNVEVAEAFSFERKELAEKIWFLKGDFADEVRNSYLSILNKDEKKGYPDKTEELAENLKNPEFRNVLREEYETFLQDYDKNPSVLRFHYHKTKDILQRLQDLEIPRKDFISNMMEIPEIKGFITEDEMDENLRRGSGISDGKKRIYNFFNENNSLQERAEFLKKEYGTGGHSHALSGARGSSEWHDAKGIKLEKEHCKDSFLNWNQVAKRIQTLIESGRYIEKEELTEQTENREDIKENIADRNESFKEESVSEIGNRRDYWVVEFNEGLGLIEKEYAGELVTKELLDEIKELDEKIRVHNKTVSEDEYGEMTDEWVGYSKFYFDHIVDGKVEEHFRMDIGDGNEVNQRDFQYLYEQIELSKENKEYGIDSIDSVVKDILEKESMTVVSSKDDYIKLLPYFRNFSYSDGTKFSVYNPFEDSENISELLRFTFFKNTDGEYRAVYNNADSLMYSSNVDYFLEKIEAEKVGLEDNITEKTREDKVAVKVGNYYAVVEKEKVKDISLEEIGLRIYPKEDNVEGKIYSLYRGTTFEESTKIDALFDEIATSMKEVNLTDLNDVFYLENQGLYEISSDKVTEEKGGFDFDVASFNEQFPDYYNDIYVYNRNLKIDDAYQNIAYINRENEIHFNVNLPEEEKAKVLELRDKKEILSALIFKEVKDVGEYQFHPQSEEFILDEKNISENLLKVPEHITDNIDEKEGYEAELVLDMKNKQLRQNLRYNGYMLSSNLAIQYENYHEMLQNLPYLLDDEHRNVMLTGYINWQIERTNEGKNEQAKEPIYQEGMQVKYQGKEYVISEIQDYKTYRTIKLDDNEGYLNGFITGSEIIPFRNESELDLEIVSTTEKLQEQSINEEDLILLDIEDYNKKGLSVLFQNKEYEITGNNFNSVGMSRLQLVSNTEKLLTEVLYTPKRPVANLYAKKALLERFNLNDKNSEKNIETKQMSLTDILKEKDNLKEKEEISSKKERVPVNIGAKVIYQGEEYTVSAFQYNDVLEKNDIWLNPISKNNHQIPIVSFSDRKELNEKLIVIDTNLNLGEDKSELLHHSLDVINDKGIVIANQFIVNVDNQNREFTVYSEQNPNN…
SIO_010081: HMPREF0389_RS09125
subclass of: SO_0000673
so part of: HMPREF0389_RS09125
location: complement(495697..507453)
location: region:495697-507453:-1
so has part: feature:495697-507453:-1:exon

WP_014262111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495697-507453:-1:exon

HMPREF0389_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02215
old locus tag: HMPREF0389_00192
so part of: sequence
location: complement(507468..508214)
location: region:507468-508214:-1
so has part: feature:507468-508214:-1:exon
subclass of: SO_0000010

position:507468:-1
position: 507468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508214:-1
position: 508214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507468-508214:-1:exon

HMPREF0389_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02215
old locus tag: HMPREF0389_00192
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008752392.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKNEVLQSQENKTQNVMQEIKEEYTKTADFLEENTDKQLTIAKEMKEEMQNKDFDPNIEELKALKDEITGLKAEIKRLNEMENIGLSSLIVRDIKAVGNTLVHLQEKAVGSIKHLYDNMKHQLSYNLTKAQEKFVQMKIGIVKGLVTSMQDFIKDQQKKLDSCLEKLDNLSKEIQKDEEKLGKDSLNKEEKPIEKKEQNERKKEGQKEKTEKKPSVLKKLKENQQKIKKEEKVRAVKVPKKDKGMEI
SIO_010081: HMPREF0389_RS02215
subclass of: SO_0000673
so part of: HMPREF0389_RS02215
location: complement(507468..508214)
location: region:507468-508214:-1
so has part: feature:507468-508214:-1:exon

WP_041250944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507468-508214:-1:exon

HMPREF0389_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02220
old locus tag: HMPREF0389_00191
so part of: sequence
location: complement(508255..508806)
location: region:508255-508806:-1
so has part: feature:508255-508806:-1:exon
subclass of: SO_0000010

position:508255:-1
position: 508255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508806:-1
position: 508806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508255-508806:-1:exon

HMPREF0389_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02220
old locus tag: HMPREF0389_00191
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262113.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFDTLIKFSKDREKLDFYATDKRATHELLKREEFTSLVYEPACGEGHIGKILEEHGYTVKATDICYRGYGEEREVDFFTVTENILDIVTNPPYFCASEFLRHALEISREGVKIAMLFRLAFLEGQSRYELFRKHPPKRVYVFSKRLNCAKNGEFWKSKSSGIAFAWFLWEVGYIGYTELRWIR
SIO_010081: HMPREF0389_RS02220
subclass of: SO_0000673
so part of: HMPREF0389_RS02220
location: complement(508255..508806)
location: region:508255-508806:-1
so has part: feature:508255-508806:-1:exon

WP_014262113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508255-508806:-1:exon

HMPREF0389_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02225
old locus tag: HMPREF0389_00190
so part of: sequence
location: complement(508810..510525)
location: region:508810-510525:-1
so has part: feature:508810-510525:-1:exon
subclass of: SO_0000010

position:508810:-1
position: 508810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510525:-1
position: 510525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508810-510525:-1:exon

HMPREF0389_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02225
old locus tag: HMPREF0389_00190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009529996.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase 3
translation: MEHKLVIAEKPSVAISIAKVIGAKNKKDGYYEGNGYKVSWCVGHLIQMANPDAYDEKYAKWKIDDLPIITKEYKYEVAKATKKQFAVLKKLMNDKEIDTVINACDAGREGEAIFRLVYLQASCKKKMKRLWISSMEDSAIKDGFDNLKDGNVYDNLFESAQARAIADWLVGMNISRLYSCLYKQNYSVGRVQTPTLSMIVKRDDEIANFKKEKYYTVELELDGFTLSTERIDSLEVAEQLKNLLECRIEITDVIQTEKITKPDLPFDLTTLQRECNKHFGYSAKQTLDYAQSLYEKKLITYPRTDSRCLTEDMITSTVNNILGKNDFDTERIRVVFNSKKVTDHHAIIPTVSSMSEDLSSIPESEAKVYRLISNKLHASVGYPLIENTTKIVATFDGFEFTSSGKVIVDEGFTKYLKEYMSKKNEEPVLPEINVGDVLEIKEKEIKEKYTQAPKHFTENTLLKAMEIAGNDGLDKNVEVERKGLGTPATRAGIIENLIYKGFIERDKKNLIATNKGISLITIVADTFKSAETTAKWEMELSDISQGKSSKEEFLNTIEHEIRNELSHYKKE
SIO_010081: HMPREF0389_RS02225
subclass of: SO_0000673
so part of: HMPREF0389_RS02225
location: complement(508810..510525)
location: region:508810-510525:-1
so has part: feature:508810-510525:-1:exon

WP_014262114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508810-510525:-1:exon

HMPREF0389_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02230
old locus tag: HMPREF0389_00189
so part of: sequence
location: complement(510643..512040)
location: region:510643-512040:-1
so has part: feature:510643-512040:-1:exon
subclass of: SO_0000010

position:510643:-1
position: 510643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512040:-1
position: 512040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510643-512040:-1:exon

HMPREF0389_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02230
old locus tag: HMPREF0389_00189
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005538878.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MNLKDYLGETNLYDKKEKLELNKPKSWLKSVSAFANGRGGKLIFGVKEDNEVLGIDDYQKDSENISEIIKTKMDSIPEFDMEIEELEGKIILILNIYQGKNTPYFVVDAGSRTAYKRVGNQSVPATRIDLFNMSLKGQKVTYDSLESDKKIEDVTFRELAIEYKKRTLKEFEEKDLNSFGLVNEEGHLTIAGSLFADGYQVYQSRVFCTRWNGLNKANGLMDALDDEEFEGNIIYLLKAAMDFVKRNSKKMWKKGPMYRIEYPEYPERAVQEGIVNALIHRDYSVIGSEVHLDIYDDRLEIYSPGGMYDGSFVQNIDPYNVSSSRRNPVLADLFARMDLMERRGSGLRKIIEAYEFEENYKEELKPKFRSTESAFFTILKNLNYNVGQNVGQNVGQNVGQKLKPDDRRKQIIEIIEGNSQVTALDLSKIFYVSERTIERDLKKLTEEKVIEYTGSAKDGYWIVKK
SIO_010081: HMPREF0389_RS02230
subclass of: SO_0000673
so part of: HMPREF0389_RS02230
location: complement(510643..512040)
location: region:510643-512040:-1
so has part: feature:510643-512040:-1:exon

WP_014262115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510643-512040:-1:exon

HMPREF0389_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02235
old locus tag: HMPREF0389_00188
so part of: sequence
location: complement(512317..513159)
location: region:512317-513159:-1
so has part: feature:512317-513159:-1:exon
subclass of: SO_0000010

position:512317:-1
position: 512317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513159:-1
position: 513159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512317-513159:-1:exon

HMPREF0389_RS02235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02235
old locus tag: HMPREF0389_00188
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005538879.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4366 domain-containing protein
translation: MKTKLKNRRTQLKRVFCVWMLLLIAIIHTNTAFAQVKESEAEKQTEQETEQVQEKKEEKVLRFPNKLEAKEPPKNSIDNGNSSNNTGIATEPSTSKAQLIENVNNANGDYPIHHGNVNGEIKDKYSADARQFITFKTKSGKTFHLIINHDEEGQNVMLLTEVSEDDLLNMVEKKEKPKEEVKKIEEPLPVEEIKKEEPKKEESKGGGSYIFLGIIVLAVVGAGYYFKIYKKKQEDDAEEDEEYDEFEDEYEREGSAEDSEEKEQQNIDDMAIDSYDEDEE
SIO_010081: HMPREF0389_RS02235
subclass of: SO_0000673
so part of: HMPREF0389_RS02235
location: complement(512317..513159)
location: region:512317-513159:-1
so has part: feature:512317-513159:-1:exon

WP_014262116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512317-513159:-1:exon

HMPREF0389_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02240
old locus tag: HMPREF0389_00187
so part of: sequence
location: complement(513137..513424)
location: region:513137-513424:-1
so has part: feature:513137-513424:-1:exon
subclass of: SO_0000010

position:513137:-1
position: 513137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513424:-1
position: 513424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513137-513424:-1:exon

HMPREF0389_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02240
old locus tag: HMPREF0389_00187
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009530021.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKKYRKNIEKQKDIQERIEELQLKQEMLKEEQEEMENIEVLKEYRSIDISIDEFLEMMRNYKKEEKQEKRKLQEMRNTENHNNMEENHENQIEK
SIO_010081: HMPREF0389_RS02240
subclass of: SO_0000673
so part of: HMPREF0389_RS02240
location: complement(513137..513424)
location: region:513137-513424:-1
so has part: feature:513137-513424:-1:exon

WP_014262117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513137-513424:-1:exon

HMPREF0389_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02245
old locus tag: HMPREF0389_00186
so part of: sequence
location: complement(513436..515424)
location: region:513436-515424:-1
so has part: feature:513436-515424:-1:exon
subclass of: SO_0000010

position:513436:-1
position: 513436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515424:-1
position: 515424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513436-515424:-1:exon

HMPREF0389_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02245
old locus tag: HMPREF0389_00186
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009531322.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: C40 family peptidase
translation: MQKKINKFQKEEKEVYDPLSKDMDNDGVIDRYDVDFRDSKVSYRTLTDDEKYDNRQNDKEKIYDEYVKNPKSKNNRYKHYAKDTFLKESPKSEKQKKYVRSNFDDKEFTRNKDTKKDSFQDVNDKRKTADKDPSQKRKGKFENQEKKISKLRQKKQKQEQKLKNKGIDGKAQSAKSAVIATGMVNRYLESGKEDNAGVDAAYKVSDQVENISRKIYHHGKKKNLRRQKKITKLGKNIENQEKKLFFQKNMEEMKKSADYQNTSRLRQFFKRRQYKKQIQKKYKDSVKNRIKKSLIESSKHFGEFVKSRGKKAVFLLLLAVGIFFMLFQAGSMMMNMGTGMVGNTVGTTYLSSEDVLKETNQEFSSLEQALQEEMDSVEENHPGYDEYIVKGKEKIGHDVHELLSYITARYGIVKNISEVESELQSLFQNMYTLTYKEEIEIRYKTVTSSYTDADGNEHTESHEEPYEYKKLIVTLEKREMDSIIREVFQSYPDNLSHYEILLASKGNMELIFGNGSGDFSEIINNPDFSNPGLEFNEESVKRIVHEAEKHIGKRYVFGANGPNNFDCSSFVCWTYTHSGIKNMPRTTAWGIYKNYCNPVSPSEAKAGDIIFFKGTYNSGSPISHVGIYVGGGYMIHAGDPIQYARIDTPYWRDHFYGFGRPK
SIO_010081: HMPREF0389_RS02245
subclass of: SO_0000673
so part of: HMPREF0389_RS02245
location: complement(513436..515424)
location: region:513436-515424:-1
so has part: feature:513436-515424:-1:exon

WP_041250945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513436-515424:-1:exon

HMPREF0389_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02250
old locus tag: HMPREF0389_00185
so part of: sequence
location: complement(515699..516724)
location: region:515699-516724:-1
so has part: feature:515699-516724:-1:exon
subclass of: SO_0000010

position:515699:-1
position: 515699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516724:-1
position: 516724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515699-516724:-1:exon

HMPREF0389_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02250
old locus tag: HMPREF0389_00185
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009530101.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific DNA-methyltransferase
translation: MKNKGEHTSFLDSYINTILCGDALETLRKFPDEIINTCITSPPYYGLRDYHKKEQIGREKTVEEYLDRLVAVFREVRRVLKSGGTCFIVIGDSYAGSGGGKGQYMDPKYPKKRNGQNPSITQKVLGYKAKDLMGIPWRLALLLREDGWYLRSDIIWHKENAMPEACRDRPTRSYEHVFLLSKSPRYYYDYEQMAEPMKEVSKKRYVRGRSEDNKYLKEDAGISVQKINKARKYGQYKGDNIPQFRNKRDIWTINTVSFRGNHYAVFPPKLAEICMIAGCPKDGIILDPFIGSGTVGFVALMQDRKYIGIELNEEYCKLARKRISEEVEKIDKEKEYEVCKE
SIO_010081: HMPREF0389_RS02250
subclass of: SO_0000673
so part of: HMPREF0389_RS02250
location: complement(515699..516724)
location: region:515699-516724:-1
so has part: feature:515699-516724:-1:exon

WP_014262119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515699-516724:-1:exon

HMPREF0389_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02255
old locus tag: HMPREF0389_00184
so part of: sequence
location: complement(516738..519215)
location: region:516738-519215:-1
so has part: feature:516738-519215:-1:exon
subclass of: SO_0000010

position:516738:-1
position: 516738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519215:-1
position: 519215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516738-519215:-1:exon

HMPREF0389_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02255
old locus tag: HMPREF0389_00184
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009221197.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraE
translation: MNKDKRKKQEQRIKKEELELRKNKKELSELKKSGKKKIKSKTNGKSSRKNGWFPFFMKEEKKETVQDTIPYKRMLKDGICQIEKNKFNKTIRFLDINYRLMEEADQESIFSEFSSFLNFFNSSVEVEFSYINSIGENEEISKLIDIKENMDDFNEIRNEYRQMLLNQSSKGNNGLSKSMYLTFTIEAEDLKQAKSRLERMEMDVLNNFKQMGVKAYVLDGEERLKVIHDILNPNDKLVFSFEDLKYSGLTTKEYIVPPSFNFSKPTYFKSGEVFAEVNFLQLLASDIKDEMLSEFLALEENMVVTFHIKAIDQMEAIKNVKRKITDLDKMKLEENKKAIRAGYDIDILPSDLVTYGTEAKNLLSELQNHDEKMFLVTILFMNMSKSKGKLDNTVFTLKSIANRHNCSLKNLNYRQEQGLVASLPLGINEVEIERGLTTSAAAIFIPFTTEELFIKGESLYYGLNALSRNIIMADRKKLKNPNGLILGTPGSGKSFAAKREITNAFLITDDDIIIADPEAEYAPLVGALKGQVIKISPISKDYVNPLDINIDYADEDNPLSLKSDFILSLFELVVGEKKLSAEEISVIDRCLPILYKAYFENPVSENMPILEDLYNLLQKQEETVGKKLAVEMEIYVKGSLNVFNHRTNVDTNNRVVCYDIKELGKQLKKIGMLVVQDQVWNRVTINRASKKATRYYVDEFHLLLKEPQTANYSIEIWKRFRKWGGMPTGLTQNIKDLLASPEIENIFDNTDFILMLNQAGTDRDILAKKLNISKHQLSYVTNSGEGEGLLFYGNTIVPFIDQFPKNTKLYSLITTKLSETGKNEK
SIO_010081: HMPREF0389_RS02255
subclass of: SO_0000673
so part of: HMPREF0389_RS02255
location: complement(516738..519215)
location: region:516738-519215:-1
so has part: feature:516738-519215:-1:exon

WP_014262120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516738-519215:-1:exon

HMPREF0389_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02260
old locus tag: HMPREF0389_00183
so part of: sequence
location: complement(519175..519585)
location: region:519175-519585:-1
so has part: feature:519175-519585:-1:exon
subclass of: SO_0000010

position:519175:-1
position: 519175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519585:-1
position: 519585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519175-519585:-1:exon

HMPREF0389_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02260
old locus tag: HMPREF0389_00183
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009531364.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PrgI family protein
translation: MAYVKVPKDLTKVKTKVALNMTKRQLIGFSIAGLIGFPVYMLCKNYLSTDISMIVMSIAVLPVLFATLYEKDNLPFEKHLAYILKFHNSKKIRIYKAKSIYHTEKTKKQDAGSKNKANGRRKKIEQRQKKKTGTTN
SIO_010081: HMPREF0389_RS02260
subclass of: SO_0000673
so part of: HMPREF0389_RS02260
location: complement(519175..519585)
location: region:519175-519585:-1
so has part: feature:519175-519585:-1:exon

WP_014262121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519175-519585:-1:exon

HMPREF0389_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02265
old locus tag: HMPREF0389_00182
so part of: sequence
location: complement(519589..520038)
location: region:519589-520038:-1
so has part: feature:519589-520038:-1:exon
subclass of: SO_0000010

position:519589:-1
position: 519589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520038:-1
position: 520038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519589-520038:-1:exon

HMPREF0389_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02265
old locus tag: HMPREF0389_00182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262122.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNINRKTRIFLGVATVISLASAVAGMIKVRSKYKKQDRFCEFEENAIETEDDIRFWEEEYLKEEEKSEEEKQQEFRELSVTVLDALFKEVLFISEKVKSVEEEVKKQSEYKELLEELESCKEEIISLWEHLEALSNMREENIIEKDRG
SIO_010081: HMPREF0389_RS02265
subclass of: SO_0000673
so part of: HMPREF0389_RS02265
location: complement(519589..520038)
location: region:519589-520038:-1
so has part: feature:519589-520038:-1:exon

WP_014262122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519589-520038:-1:exon

HMPREF0389_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02270
old locus tag: HMPREF0389_00181
so part of: sequence
location: complement(520113..520976)
location: region:520113-520976:-1
so has part: feature:520113-520976:-1:exon
subclass of: SO_0000010

position:520113:-1
position: 520113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520976:-1
position: 520976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520113-520976:-1:exon

HMPREF0389_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02270
old locus tag: HMPREF0389_00181
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000466911.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CD0415/CD1112 family protein
translation: MLNLFEKINEFFKDIMIDIIKDNLSAMLVDINDKVSTVAGEVGKTPSSWNSEVFTFIKSINTNVVLPIAAIILTAILCIELIQVVMRKNSMQDTDTFEFFKYIIKMWIAVWLVSHAFDFSMAVFDVAQSMIGKAAGVVGTSANITPGNFDAMVDALKTESLGTLIGIALETGLVKFSLTILSILITVILYGRMIEIYIYCSVAAIPFSTMGNKEWGSIGTNYIKSLFALGLQGLFILIFFGIYAVLVKTVNFTDIHTSILQVLAYGLILGVMMMKSGSIAKAILNSH
SIO_010081: HMPREF0389_RS02270
subclass of: SO_0000673
so part of: HMPREF0389_RS02270
location: complement(520113..520976)
location: region:520113-520976:-1
so has part: feature:520113-520976:-1:exon

WP_014262123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520113-520976:-1:exon

HMPREF0389_RS02275
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02275
old locus tag: HMPREF0389_00180
so part of: sequence
location: complement(520976..521191)
location: region:520976-521191:-1
so has part: feature:520976-521191:-1:exon
subclass of: SO_0000010

position:521191:-1
position: 521191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520976-521191:-1:exon

HMPREF0389_RS02275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02275
old locus tag: HMPREF0389_00180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002838961.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Maff2 family protein
translation: MDFFVQAVNVLKVLVMAIGAGLGAWGVINLLEGYGSDNPGAKSQGIKQLMSGGGIVLIGLKLIPLLANVLK
SIO_010081: HMPREF0389_RS02275
subclass of: SO_0000673
so part of: HMPREF0389_RS02275
location: complement(520976..521191)
location: region:520976-521191:-1
so has part: feature:520976-521191:-1:exon

WP_005538895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520976-521191:-1:exon

HMPREF0389_RS02280
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02280
old locus tag: HMPREF0389_00179
so part of: sequence
location: complement(521195..521539)
location: region:521195-521539:-1
so has part: feature:521195-521539:-1:exon
subclass of: SO_0000010

position:521195:-1
position: 521195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521539:-1
position: 521539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521195-521539:-1:exon

HMPREF0389_RS02280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02280
old locus tag: HMPREF0389_00179
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005538898.1
GO function: GO:0003697 - single-stranded DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MQKEMLNINGNLIGDVEIKTIQGKDGEVTVANFTLFRKMGKTGEKQKEYINCNVYGEKTEITKDFKKGDFIHVYGYYKEVQKEDKTYRNFIVKHVNKIDKEIENKKEQEENKEE
SIO_010081: HMPREF0389_RS02280
subclass of: SO_0000673
so part of: HMPREF0389_RS02280
location: complement(521195..521539)
location: region:521195-521539:-1
so has part: feature:521195-521539:-1:exon

WP_014262124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521195-521539:-1:exon

HMPREF0389_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02285
old locus tag: HMPREF0389_00178
pseudo: true
so part of: sequence
location: complement(521829..>522656)
location: region:521829-522656:-1
so has part: feature:521829-522656:-1:exon
subclass of: SO_0000010

position:521829:-1
position: 521829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522656:-1
position: 522656
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521829-522656:-1:exon

HMPREF0389_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02285
old locus tag: HMPREF0389_00178
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006740602.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: TraG/TraD/VirD4 family protein
SIO_010081: HMPREF0389_RS02285
subclass of: SO_0000673
so part of: HMPREF0389_RS02285
location: complement(521829..>522656)
location: region:521829-522656:-1
so has part: feature:521829-522656:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:521829-522656:-1:exon

HMPREF0389_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02290
old locus tag: HMPREF0389_00177
so part of: sequence
location: complement(522668..522853)
location: region:522668-522853:-1
so has part: feature:522668-522853:-1:exon
subclass of: SO_0000010

position:522668:-1
position: 522668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522853:-1
position: 522853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522668-522853:-1:exon

HMPREF0389_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02290
old locus tag: HMPREF0389_00177
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005924807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposon-encoded TnpW family protein
translation: MQEKRNEQTTGTKTIKKIGKTTYEVIVHFNDKSSETMQDKLKRIMLREFRRKSDEKKDDFD
SIO_010081: HMPREF0389_RS02290
subclass of: SO_0000673
so part of: HMPREF0389_RS02290
location: complement(522668..522853)
location: region:522668-522853:-1
so has part: feature:522668-522853:-1:exon

WP_009429691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522668-522853:-1:exon

HMPREF0389_RS02295
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02295
old locus tag: HMPREF0389_00176
so part of: sequence
location: complement(522942..524057)
location: region:522942-524057:-1
so has part: feature:522942-524057:-1:exon
subclass of: SO_0000010

position:522942:-1
position: 522942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524057:-1
position: 524057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522942-524057:-1:exon

HMPREF0389_RS02295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02295
old locus tag: HMPREF0389_00176
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009535425.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PDDEXK nuclease domain-containing protein
translation: MEKKELSITSDSEYKKLLLELKEKVRNSQLKAAIKVNYELLDLYWTLGEYIVKNQEQHSWGDAFIKSLAKDLQKEFPDMKGFSETNIKYIRRWYLFYMKGLQGVAEIENNDSNSKGLQPVAQFDERVINHIKQIPWGHNQRIINKCKTIDEAIYYVDKTIENGWSRNVLVHQIESGLYGREGKSITNFEKRLPALQSDLARQTLKDPYHFDFLTIREGYDERELQKELVDKISDFLLELGEGFAYIGKEYHININGDDFYIDLLFYNLKLHSYIVIELKAEKFKPEHLGQLNFYVTAVNRELKTDRDNATIGLLICKDKNDVVCEYSLEQISQPIGISKYEITKLLEAEYKSSLPSIEEIEKKIKEIDTDN
SIO_010081: HMPREF0389_RS02295
subclass of: SO_0000673
so part of: HMPREF0389_RS02295
location: complement(522942..524057)
location: region:522942-524057:-1
so has part: feature:522942-524057:-1:exon

WP_014262126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522942-524057:-1:exon

HMPREF0389_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02300
old locus tag: HMPREF0389_00175
so part of: sequence
location: complement(524233..524946)
location: region:524233-524946:-1
so has part: feature:524233-524946:-1:exon
subclass of: SO_0000010

position:524233:-1
position: 524233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524946:-1
position: 524946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524233-524946:-1:exon

HMPREF0389_RS02300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02300
old locus tag: HMPREF0389_00175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009222488.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADKRMFSLKIVDSDLFLDMPLSSQCLYFHLSMRADDDGFVNNPKKIIKIIGANEDDLKILIAKGFVIVFEQGIIVITHWKINNFIRKDRYKPTLYENEVQSLSQTKNGMYIKEVGCHLVDQRLTSGQPSIDKGRLDKVSIDKGREESTPPPNSKKYGEYQNIILTDEQYKALQEKLQSHTDTMIEKLSRYIKSTGKTYQDHYVTILNWYEQDKDKLSQKKTGKIPTIEDYDKGEHL
SIO_010081: HMPREF0389_RS02300
subclass of: SO_0000673
so part of: HMPREF0389_RS02300
location: complement(524233..524946)
location: region:524233-524946:-1
so has part: feature:524233-524946:-1:exon

WP_014262127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524233-524946:-1:exon

HMPREF0389_RS02305
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: mobQ
locus tag: HMPREF0389_RS02305
old locus tag: HMPREF0389_00174
so part of: sequence
location: complement(525027..526667)
location: region:525027-526667:-1
so has part: feature:525027-526667:-1:exon
subclass of: SO_0000010

position:525027:-1
position: 525027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526667:-1
position: 526667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525027-526667:-1:exon

HMPREF0389_RS02305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: mobQ
locus tag: HMPREF0389_RS02305
old locus tag: HMPREF0389_00174
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002838494.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobQ family relaxase
translation: MEIKSLHTHVDIVTRSKGHSMIAKAAYNARDKLQDEYYGKTHDYSKKTDLVFSKIFLPEHIPKEFSNREYLWNEVEKIEKSKNSQLARNLLFELPRELNEQDRIKLISEFIEENFTSKGMIADCNIHNPMASDHEEQPHAHILLTLREMDSEGKWKPKCRKEYILDENGEKIKLKSGNYKSRKVNLNDWNEPDKAKEWRENFSKKANGYLERNNIQKRIDPRTFEEQGREELPQIHLGTSSYQMEKKGIQTERGNQNRKIIALNLEFKKLKAELSKLTSWIGSLLGSLQVKYDEYKQEKKEEYENKAELFNLYEYISIYYDIQGEKARKLNPYASNKKIGADLRRFSKARIYLKDNNLKTIADLQEKISTLQAKNKKISQDIKAKTTRIENLNKGFAYADIIKDNKQVFEEWNSKSLFKDSFYNSHKEQIDKYKRARAILEKITRSSAIKIKDWKKEIQSLESEISKLNRQSQSIKEEYENINHIKYAVKTVNEDYGIDLSIEIDKAIKRGEKPSVIAQIKKYQEQQEAYEKRKEKTKNYYRNEER
SIO_010081: HMPREF0389_RS02305
subclass of: SO_0000673
so part of: HMPREF0389_RS02305
location: complement(525027..526667)
location: region:525027-526667:-1
so has part: feature:525027-526667:-1:exon

WP_014262128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525027-526667:-1:exon

HMPREF0389_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02310
old locus tag: HMPREF0389_00173
so part of: sequence
location: complement(526983..527357)
location: region:526983-527357:-1
so has part: feature:526983-527357:-1:exon
subclass of: SO_0000010

position:526983:-1
position: 526983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527357:-1
position: 527357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526983-527357:-1:exon

HMPREF0389_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02310
old locus tag: HMPREF0389_00173
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005542175.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKELENVMSQLEKETKKKEQAENKIKLLKQKKSKLKRSADTKRKVEKGGVFEAFEREITGMQEETNNDLIYAFLDYVLSDNRNREKLKELTEIHLREKEISLEENSNLGEENGNDDFEELTEEE
SIO_010081: HMPREF0389_RS02310
subclass of: SO_0000673
so part of: HMPREF0389_RS02310
location: complement(526983..527357)
location: region:526983-527357:-1
so has part: feature:526983-527357:-1:exon

WP_014262129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526983-527357:-1:exon

HMPREF0389_RS02315
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02315
old locus tag: HMPREF0389_00172
so part of: sequence
location: complement(527444..527860)
location: region:527444-527860:-1
so has part: feature:527444-527860:-1:exon
subclass of: SO_0000010

position:527444:-1
position: 527444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527860:-1
position: 527860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527444-527860:-1:exon

HMPREF0389_RS02315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02315
old locus tag: HMPREF0389_00172
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005542176.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma factor-like helix-turn-helix DNA-binding protein
translation: MDKKDYYLYVKGKAVKVSEEVYKAYWKITEHEKYLQRKDWKYDVIPFSAMDYDGHFVDNIIDERIDLEKIVEVKMQIEELNKALATLTKKERELMEAIFYKEESLRSIGKKEKVSYQAIGKRRDKILEKLRKLLEDKF
SIO_010081: HMPREF0389_RS02315
subclass of: SO_0000673
so part of: HMPREF0389_RS02315
location: complement(527444..527860)
location: region:527444-527860:-1
so has part: feature:527444-527860:-1:exon

WP_014262130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527444-527860:-1:exon

HMPREF0389_RS02320
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02320
old locus tag: HMPREF0389_00171
so part of: sequence
location: complement(528145..529500)
location: region:528145-529500:-1
so has part: feature:528145-529500:-1:exon
subclass of: SO_0000010

position:528145:-1
position: 528145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529500:-1
position: 529500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528145-529500:-1:exon

HMPREF0389_RS02320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02320
old locus tag: HMPREF0389_00171
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002844948.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO process: GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MATE family efflux transporter
translation: MKEDMKTQLLTKSPKELLFKLAIPGIIGMIVIGLYPFMDGIFAGWLIGDYAMSAISVSMSLTIINGGISALIGVGSASILSRAIGKGDKETTDKIFGNFCYWVIFFSVIITILGLVFAPHFLDLVGAKGNIKELGVRYLRVVFFGSIFVNFAQAGNMTMRGEGALKQSMKIMGAGAILNIILDPIFMKLMGEYAIEGAAIATVISQIVQAILTFSYFSKKSAFVGIHKIQKYKAIYSEMFSIGSSAMMMQILFAVQQTFLFKQAFAYGGDDWGILMSATMRLYMFSFIPLWGMSQGLQPVIGANFGAKQYGRVKDTMKIFMYGATILAAASWIPSMFCSEKLLSLFSVRREIIEVGVVNFKMFYSTFILYGIMIMTLTFFQSIGDGKKAGMIVMLRQLVLFIPAILLFPKAFGASAVWWTEPIVDFSMIMFGLFLMLNELRKMGKQQITKS
SIO_010081: HMPREF0389_RS02320
subclass of: SO_0000673
so part of: HMPREF0389_RS02320
location: complement(528145..529500)
location: region:528145-529500:-1
so has part: feature:528145-529500:-1:exon

WP_009222493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528145-529500:-1:exon

HMPREF0389_RS02325
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02325
old locus tag: HMPREF0389_00170
so part of: sequence
location: complement(529525..530919)
location: region:529525-530919:-1
so has part: feature:529525-530919:-1:exon
subclass of: SO_0000010

position:529525:-1
position: 529525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530919:-1
position: 530919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529525-530919:-1:exon

HMPREF0389_RS02325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02325
old locus tag: HMPREF0389_00170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262131.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MLELQNLTVGFDGESILKNINMIFKPGEVTVITGHSGTGKSSLLKVINGIIPEYNNAELEGDIVFNGKSLFGLTILERSKFISTVFQNPKTQFYCINSTDELAFQLENRNIDKNLILDKIRYYSEVLGTKELLDRNIFELSGGEKQLIAVTACGISENEIILLDEPSSSLDQAAIEHLQKAIEELKKRKKIIVIVEHRLFYLKDTIDKLCVIENGTYKEYTKEHFCDDFFEQVSEKHNLRSFNAISKNNFLSRKYKQVEVLKKNSSDLDCKALSCLNFKKKHERTAIFDFSIAFESGINFIIGQNGVGKSTFINLLMGLTRGTGEVFYNGVKVKKRCENIFAIMQDVNYQLFTESVWQEISTITKENELKNEILRTVNLFDKKEMHPNSLSGGEKQRLLLAMSMLSKKPIIIFDEPTSGLCKRQMDILIGFLNKMTEQGKIIIIITHDYEFIDRCNGKVYEFMK
SIO_010081: HMPREF0389_RS02325
subclass of: SO_0000673
so part of: HMPREF0389_RS02325
location: complement(529525..530919)
location: region:529525-530919:-1
so has part: feature:529525-530919:-1:exon

WP_014262131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529525-530919:-1:exon

HMPREF0389_RS02330
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02330
old locus tag: HMPREF0389_00169
so part of: sequence
location: complement(530912..531613)
location: region:530912-531613:-1
so has part: feature:530912-531613:-1:exon
subclass of: SO_0000010

position:530912:-1
position: 530912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531613:-1
position: 531613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530912-531613:-1:exon

HMPREF0389_RS02330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02330
old locus tag: HMPREF0389_00169
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002844952.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-coupling factor transporter transmembrane component T
translation: MIIKLDFRTKLFMTIVLSYVMVLGNIQTKYFVQAILISTIPIILLINAKYIRVAIIGVATLLFVYAADKFLIGLNYNPVVAILLIIVMVIKKILPAFLMGRYTILTSNVGESIYSLKKMKCPDEIAIPLTVMVRFFYAARIDYSNIKKAMRLRGLTLKKLIKSPILLFEYRLVPLLMCLSKAADDLTVSAMTKGLAVNQKRTSISETYMGLVDFMFFLIMAWIIYLYIRGKYA
SIO_010081: HMPREF0389_RS02330
subclass of: SO_0000673
so part of: HMPREF0389_RS02330
location: complement(530912..531613)
location: region:530912-531613:-1
so has part: feature:530912-531613:-1:exon

WP_009525613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:530912-531613:-1:exon

HMPREF0389_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02335
old locus tag: HMPREF0389_00168
so part of: sequence
location: complement(531633..532220)
location: region:531633-532220:-1
so has part: feature:531633-532220:-1:exon
subclass of: SO_0000010

position:531633:-1
position: 531633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532220:-1
position: 532220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531633-532220:-1:exon

HMPREF0389_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02335
old locus tag: HMPREF0389_00168
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004804259.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MptD family putative ECF transporter S component
translation: MSKRLEVKDLINIGLFSVLGFIFMMIGSFLAMVPVLMPVVPFAQGVLVGPVNMLYSTKIKKRGMIFIQSLLIALIYVAMGHGPWALLTAVIAGIIAEIILKSGEYTNVKKARLAFSIAPLCTLGNWLPIFISRNEYIKQMLEQGYDQEFIDKMLSVMPNWIIVVMAIVGIIGAYIGCSIGMAFLKKHFKKTGMEK
SIO_010081: HMPREF0389_RS02335
subclass of: SO_0000673
so part of: HMPREF0389_RS02335
location: complement(531633..532220)
location: region:531633-532220:-1
so has part: feature:531633-532220:-1:exon

WP_009525612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531633-532220:-1:exon

HMPREF0389_RS02340
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02340
old locus tag: HMPREF0389_00167
so part of: sequence
location: complement(532240..532833)
location: region:532240-532833:-1
so has part: feature:532240-532833:-1:exon
subclass of: SO_0000010

position:532240:-1
position: 532240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532833:-1
position: 532833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532240-532833:-1:exon

HMPREF0389_RS02340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02340
old locus tag: HMPREF0389_00167
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009529548.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MKEEKQKVGQIKKKKIREAAKKCFLTKGFQSTTMEDVITEIGMSRGGVYHHYASTNEMLKDLMLDGNDYRNSLINEYLENNRGKDKYQQMGDILVDKSLADTDLMRLYTLLLQAKKYNEDLEKLYQELKLNTTNELSLIAKQLGIKADIFGDGFLVNYINGLILSSEILGARKSYSEHKRYIKETMINYIVDVEKKN
SIO_010081: HMPREF0389_RS02340
subclass of: SO_0000673
so part of: HMPREF0389_RS02340
location: complement(532240..532833)
location: region:532240-532833:-1
so has part: feature:532240-532833:-1:exon

WP_009529548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532240-532833:-1:exon

HMPREF0389_RS02345
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02345
old locus tag: HMPREF0389_00166
so part of: sequence
location: complement(532933..534780)
location: region:532933-534780:-1
so has part: feature:532933-534780:-1:exon
subclass of: SO_0000010

position:532933:-1
position: 532933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534780:-1
position: 534780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532933-534780:-1:exon

HMPREF0389_RS02345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02345
old locus tag: HMPREF0389_00166
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014262132.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4368 domain-containing protein
translation: MRNYEKITALYERLSRDDELQGESNSIVNQKKILEEYASKNNLFNIIHFTDDGISGTQFDRLGFMAMMNGVNQGNIGCIIVKDMSRLGRDYLKVGQCMEILRQKGVRLIAINDNVDSFYKDDDFTPFRNIMNEWYARDTSRKIKSTFKAKGESGKHTGSSPPYGYIKDKDDKNQWIIDEKAAEVVRRIFHLTMDGKGPYAIARILEADKIDIPAYHQQKLGYGLHQSKVFEYPYRWCSSTIASILKKQEYLGHTVNFKTRKHFKDKKSKYVSEDNWLIFENTHEPIIDQETFDNVQRIRGNVKRYPDGWGDYHPLTGLMYCSDCGSKMYVHRTSNYKNIPYYTCSAYTKVPCGTLCPSAHRIKAEVVLNLIQSTLQDIKKSLDEDNEAFLHSIQNEMEESEKIEMEKKRTRLTDSTNRLQELERLMCRIYEDMILEKIPNTRYEILNNQYETEQRELSKEIDGLEKAIKRYEKETNRAKKFIRLIERYDNFDELTPTIINEFVEKILIHERDRKGSQTANQKVEIYFNFIGNYEPPKEELSEEEMQKLREEEEKERARKDRLHQNYLKRKANGKQKEYEDRYKARREKKKQDKLKVLKRTGILVSEYRKIFKKQK
SIO_010081: HMPREF0389_RS02345
subclass of: SO_0000673
so part of: HMPREF0389_RS02345
location: complement(532933..534780)
location: region:532933-534780:-1
so has part: feature:532933-534780:-1:exon

WP_014262132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532933-534780:-1:exon

HMPREF0389_RS08855
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS08855
old locus tag: HMPREF0389_00165
so part of: sequence
location: complement(534821..535321)
location: region:534821-535321:-1
so has part: feature:534821-535321:-1:exon
subclass of: SO_0000010

position:534821:-1
position: 534821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535321:-1
position: 535321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534821-535321:-1:exon

HMPREF0389_RS08855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS08855
old locus tag: HMPREF0389_00165
inference: COORDINATES: protein motif:HMM:NF014581.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MFPKGTVLVECGKMLEKHGYEIKVLNTINFKKSMHYNPFAYLRSEKDILKLVQTIMANTKGEGEKSTEDFWCKAERLYYTALIGYLYYEAPEEEQNFESLLAFIDASEVREEDENFKNAVDYMFDALEKEKPNHFAVKQYRKYKLAAGVIELRRTLHHNFSEKCFA
SIO_010081: HMPREF0389_RS08855
subclass of: SO_0000673
so part of: HMPREF0389_RS08855
location: complement(534821..535321)
location: region:534821-535321:-1
so has part: feature:534821-535321:-1:exon

WP_278214653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534821-535321:-1:exon

HMPREF0389_RS02355
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02355
old locus tag: HMPREF0389_00164
so part of: sequence
location: complement(535356..535520)
location: region:535356-535520:-1
so has part: feature:535356-535520:-1:exon
subclass of: SO_0000010

position:535356:-1
position: 535356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535520:-1
position: 535520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535356-535520:-1:exon

HMPREF0389_RS02355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02355
old locus tag: HMPREF0389_00164
inference: COORDINATES: protein motif:HMM:NF025565.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposon-encoded TnpW family protein
translation: MEEEKRVIKEPQHKQLIMDIGKTKYTVNLHFKQGTGETYKDKILKLIKRETEKI
SIO_010081: HMPREF0389_RS02355
subclass of: SO_0000673
so part of: HMPREF0389_RS02355
location: complement(535356..535520)
location: region:535356-535520:-1
so has part: feature:535356-535520:-1:exon

WP_006627244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535356-535520:-1:exon

HMPREF0389_RS02360
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02360
old locus tag: HMPREF0389_00163
so part of: sequence
location: complement(535634..536110)
location: region:535634-536110:-1
so has part: feature:535634-536110:-1:exon
subclass of: SO_0000010

position:535634:-1
position: 535634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536110:-1
position: 536110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535634-536110:-1:exon

HMPREF0389_RS02360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02360
old locus tag: HMPREF0389_00163
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKKRKIIIFIFSILLLILFLGYFALIRGFYAASDRVTGEYNGRASIQEFNKYDDLKIGANKYNQPIFVDYRQAMKFIKKEYSDVLDKAYELYHKEYKLGKLNNDNFGIYMNLIHDMPSENEEQRKRNVFVAGFFDIYENSLKRWIYIPGMGWDRVCP
SIO_010081: HMPREF0389_RS02360
subclass of: SO_0000673
so part of: HMPREF0389_RS02360
location: complement(535634..536110)
location: region:535634-536110:-1
so has part: feature:535634-536110:-1:exon

WP_014262134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535634-536110:-1:exon

HMPREF0389_RS02365
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: mobQ
locus tag: HMPREF0389_RS02365
old locus tag: HMPREF0389_00162
so part of: sequence
location: complement(536191..537651)
location: region:536191-537651:-1
so has part: feature:536191-537651:-1:exon
subclass of: SO_0000010

position:536191:-1
position: 536191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537651:-1
position: 537651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536191-537651:-1:exon

HMPREF0389_RS02365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: mobQ
locus tag: HMPREF0389_RS02365
old locus tag: HMPREF0389_00162
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003042188.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobQ family relaxase
translation: MAIYHLCIKIISRGKGKSAVAASAYRSGEKIKNEYDGIVHDFTRKSGIAHTEILLPQNAPQEFANRSVLWNSVEKIEKSKNSQLAREIEIALPKELDQEKQIELVREYVKENFVKVGMCADIALHDKNDGNPHCHILITMRPLNEDKTWGAKSKKEYILDENGEKIKLKNGNYKTRKINTTDWNEQDKAEEWRKAWADITNKYLEENSIQEKVDHRSYQRQGIEQIPTIHMGVSASQMEKKGIATDRGNINREIKHQNKILKEIARRIKTLLNWIRGIGKEEKAETDNLKSTLPPKESLLSVFGNLIRKNADNHNTDLEKYIESYQFLKEKNIISASELKENIVTLRDKNYKTTRAIKDTEKQIDDKTQLIDQAEKYLKYKDTYKAYTKLKKNKQDTFYNEHTAEIILFESAKKYLKEHLGESKTLNVSKWKSEIGTLRKEKNNLYNQILEIREEVEQAEKVKNCIEQLQIQEKQLSQVKRNELDL
SIO_010081: HMPREF0389_RS02365
subclass of: SO_0000673
so part of: HMPREF0389_RS02365
location: complement(536191..537651)
location: region:536191-537651:-1
so has part: feature:536191-537651:-1:exon

WP_014262135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536191-537651:-1:exon

HMPREF0389_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02370
old locus tag: HMPREF0389_00161
so part of: sequence
location: complement(537891..538211)
location: region:537891-538211:-1
so has part: feature:537891-538211:-1:exon
subclass of: SO_0000010

position:537891:-1
position: 537891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538211:-1
position: 538211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537891-538211:-1:exon

HMPREF0389_RS02370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02370
old locus tag: HMPREF0389_00161
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002846351.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3847 domain-containing protein
translation: MKNIDEKILMAEEEIKQLQNKRKKLISQQKQEERKKRDRRLYEKGAVFESIFTESKDFTKDEFYQLITFPNIKEEVNQKILKIIEKRGQSENQNTENQEEEIDTEE
SIO_010081: HMPREF0389_RS02370
subclass of: SO_0000673
so part of: HMPREF0389_RS02370
location: complement(537891..538211)
location: region:537891-538211:-1
so has part: feature:537891-538211:-1:exon

WP_014262136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537891-538211:-1:exon

HMPREF0389_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02375
old locus tag: HMPREF0389_00160
so part of: sequence
location: complement(538319..539614)
location: region:538319-539614:-1
so has part: feature:538319-539614:-1:exon
subclass of: SO_0000010

position:538319:-1
position: 538319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539614:-1
position: 539614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538319-539614:-1:exon

HMPREF0389_RS02375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02375
old locus tag: HMPREF0389_00160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009525605.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNVNEAWSKLFEKYDILNKIQSEGAFFITANQIKEFKEPRLMAKWDSSENLPSIFKKHNINILPISRNGYVLSDFKLYEPIPELGEHITEMQKVEIPEYETIDIGNISSEANAINVLMLSKILDDFLDEDDNVATFNGRMGTGIFSFRVDRHRGSSFKVDVKNAQCEIDGGMENNNSVVILEAKNVVHPDFHIRQLYYPYRLWASKVVKPIRLVFSIYSNQIYRLFEYVFEDKDNYSSIRLVKSKNYSLQDTDIALNELYDVYSDVKVIYDDNQNNTNIPFIQANSFERIISLMEILFEENKTTEEIAETMEFDLRQSDYYYNAGKYLGLFEKKDVEDEEKIVKKVSLSKLGKDTVKLRYKERQLKLVSLILEHEIFNRLFIKVYNSGELPTKEEIQNIMRENNVCNEGQIVRRSSSVYSWLKWIFNLQNI
SIO_010081: HMPREF0389_RS02375
subclass of: SO_0000673
so part of: HMPREF0389_RS02375
location: complement(538319..539614)
location: region:538319-539614:-1
so has part: feature:538319-539614:-1:exon

WP_009525605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538319-539614:-1:exon

HMPREF0389_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02380
old locus tag: HMPREF0389_00159
so part of: sequence
location: complement(539616..540470)
location: region:539616-540470:-1
so has part: feature:539616-540470:-1:exon
subclass of: SO_0000010

position:539616:-1
position: 539616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540470:-1
position: 540470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539616-540470:-1:exon

HMPREF0389_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02380
old locus tag: HMPREF0389_00159
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009525604.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA adenine methylase
translation: MTKNSRKKNIVLSPVVKWVGGKRQLLSDIVPLIPKTFSTYVEPFVGGGAVIFDIQPKKAIINDFNSELINIYKVIKEKPNELILALENHERLNSEEYFYEVRALDRNEKYGEINDIEKAARIIYLNKTCYNGLFRVNQAGQFNSPYGKYKNPNIVNMPVVLAMSKYFNENNIKIMNGDYKNSLKNLRKGAFVYFDPPYMPISSSSSFTGYTENGFDTKQQIELKEECDKLNSKGVKFLLSNSDHPFIRELYKDYEIITVKAKRSINSNGNKRGEINEVLVRNYD
SIO_010081: HMPREF0389_RS02380
subclass of: SO_0000673
so part of: HMPREF0389_RS02380
location: complement(539616..540470)
location: region:539616-540470:-1
so has part: feature:539616-540470:-1:exon

WP_009525604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539616-540470:-1:exon

HMPREF0389_RS02385
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02385
old locus tag: HMPREF0389_00158
so part of: sequence
location: complement(540484..540696)
location: region:540484-540696:-1
so has part: feature:540484-540696:-1:exon
subclass of: SO_0000010

position:540484:-1
position: 540484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540696:-1
position: 540696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540484-540696:-1:exon

HMPREF0389_RS02385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02385
old locus tag: HMPREF0389_00158
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002694906.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MNVSYQPLWKILEDKKMKKKDLIEIANISENCVANMGNNKYVSMANISRICEALECTPNDVFQFCASDKR
SIO_010081: HMPREF0389_RS02385
subclass of: SO_0000673
so part of: HMPREF0389_RS02385
location: complement(540484..540696)
location: region:540484-540696:-1
so has part: feature:540484-540696:-1:exon

WP_002694906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540484-540696:-1:exon

HMPREF0389_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02390
old locus tag: HMPREF0389_01685
so part of: sequence
location: complement(540794..542449)
location: region:540794-542449:-1
so has part: feature:540794-542449:-1:exon
subclass of: SO_0000010

position:540794:-1
position: 540794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542449:-1
position: 542449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540794-542449:-1:exon

HMPREF0389_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02390
old locus tag: HMPREF0389_01685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009525603.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MSNTKRTGQTALYERLSRDDEMQGESNSITNQKQLLESYAKRNGFVNIYHYTDDGVSGTTFDREGFQKMIKAVEENKVSTVIVKDMSRFGRDYLKVGFYTEILFKEKGVRFIAINNGIDSEKQAESDFTPFLNIMNEWYARDTSRKIQSIFRARMEEGKRVSPSVPYGYYRNPKNKQELLVDKESAKVVKRIYRLVIEGYGVTQIADILTKDKVLIPSAYAEIHYPENNHSSKKRGIEDPYFWTPTTVGYILEKREYMGHTVLGKTICLDYKTKKRRKAKEDELIIFKNTHEAIIDEETWNNAQRLRKTVRRSPKYGTTSHPFTGLLICSDCGGKLSYREPAEHKEKKYDCDYCFVCQHYRHRKGTCSMHYIKVKTVNEILLKSIKEITNFAKEEKQEFLNVMNKLSDEKREEKYQGDKEKLEKLSSRNEELTTLITKLYEDHALGKIPVKHFDRLFNTYDTEQQDLEKQIQYFEQEIESYHQRKVDTDKFLKMIEKYTDIEELTVPMINEYIEKVVVHEATGGRQGKDRKQQVDVYFNFIGNCQVPQSEK
SIO_010081: HMPREF0389_RS02390
subclass of: SO_0000673
so part of: HMPREF0389_RS02390
location: complement(540794..542449)
location: region:540794-542449:-1
so has part: feature:540794-542449:-1:exon

WP_014262137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540794-542449:-1:exon

HMPREF0389_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02395
old locus tag: HMPREF0389_01686
pseudo: true
so part of: sequence
location: complement(<542504..543061)
location: region:542504-543061:-1
so has part: feature:542504-543061:-1:exon
subclass of: SO_0000010

position:542504:-1
position: 542504
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:543061:-1
position: 543061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542504-543061:-1:exon

HMPREF0389_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02395
old locus tag: HMPREF0389_01686
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000565771.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
SIO_010081: HMPREF0389_RS02395
subclass of: SO_0000673
so part of: HMPREF0389_RS02395
location: complement(<542504..543061)
location: region:542504-543061:-1
so has part: feature:542504-543061:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:542504-543061:-1:exon

HMPREF0389_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02400
old locus tag: HMPREF0389_00156
so part of: sequence
location: complement(543083..543568)
location: region:543083-543568:-1
so has part: feature:543083-543568:-1:exon
subclass of: SO_0000010

position:543083:-1
position: 543083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543568:-1
position: 543568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543083-543568:-1:exon

HMPREF0389_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02400
old locus tag: HMPREF0389_00156
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005538904.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PcfB family protein
translation: MINEEVTRQVIAVKKRAIHLTAREVIKLMKMILNKAEKEKNGLKDFIGKQKPTTVKDLVKKGKVETLELNDVDLKNLKRELNKSGVKFSIKKDLTTGNKIVFFQAKDEKVMEQAFKEAVAKFARKNKKRESVIDKLNHFKEKVKNTPQRDKIKEKHKEQSL
SIO_010081: HMPREF0389_RS02400
subclass of: SO_0000673
so part of: HMPREF0389_RS02400
location: complement(543083..543568)
location: region:543083-543568:-1
so has part: feature:543083-543568:-1:exon

WP_014262139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:543083-543568:-1:exon

HMPREF0389_RS02405
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02405
old locus tag: HMPREF0389_00155
so part of: sequence
location: complement(543573..544427)
location: region:543573-544427:-1
so has part: feature:543573-544427:-1:exon
subclass of: SO_0000010

position:543573:-1
position: 543573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544427:-1
position: 544427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543573-544427:-1:exon

HMPREF0389_RS02405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02405
old locus tag: HMPREF0389_00155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009529519.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: METTRELFDKVFENMEKNMLNEENGDYVNSEDGLVYCGKCHTAKQQMANVGGVLRKIPKNCDCRSKEMEKERKEMEEFEHSIRINRLKSMAFDDDLMYKQTFEQEDGSLEHKQAGLNYVKHFEDMEKENIGLILTGAVGTGKTYLASSIANALIEKGISVRMTNFGVILNDMMNLQIDKNMYIKNLNSNRLLIIDDFGIQRDTSFALEHIFNIIDSRYRANKPIIVTTNLSISHLMNTTDLKEKRIYSRLLEMATPIIFNGENHRIKTMREKAMTANLILMESR
SIO_010081: HMPREF0389_RS02405
subclass of: SO_0000673
so part of: HMPREF0389_RS02405
location: complement(543573..544427)
location: region:543573-544427:-1
so has part: feature:543573-544427:-1:exon

WP_014262140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:543573-544427:-1:exon

HMPREF0389_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02410
old locus tag: HMPREF0389_00154
so part of: sequence
location: complement(544473..545483)
location: region:544473-545483:-1
so has part: feature:544473-545483:-1:exon
subclass of: SO_0000010

position:544473:-1
position: 544473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545483:-1
position: 545483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544473-545483:-1:exon

HMPREF0389_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02410
old locus tag: HMPREF0389_00154
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003037562.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MNIKFSYYYGKEADQYSFFKIPKILYTDSIFKTLSSDAKVLYAILLDRMSLSMKNGWLDEENKVFIIFTIDEIEETMNIGRNKAINIMKEIQDFGLIEKKRRGLGKPNIIYVKSFLVETKEENRTAEEETSEDRSLNVKFQEVSKANLQKFEKQTSRNLENKPQEVSKTNCNKTNINKTKKSEPDISKTTSIDKTAHKRKLEKEEGGQVEKIIKQNISYLDFMDRDSPTKETIDFIVEIMVEAVENKRDLKINQTWISYEKIRGRLLEIKKEHIEYVLSVLKENTSKITHFRAYLLSIIYNAPINIIYYNKQSTNTGNLGNYADDERIWQDFLKGK
SIO_010081: HMPREF0389_RS02410
subclass of: SO_0000673
so part of: HMPREF0389_RS02410
location: complement(544473..545483)
location: region:544473-545483:-1
so has part: feature:544473-545483:-1:exon

WP_003037562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544473-545483:-1:exon

HMPREF0389_RS02415
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02415
old locus tag: HMPREF0389_00153
so part of: sequence
location: complement(545582..546451)
location: region:545582-546451:-1
so has part: feature:545582-546451:-1:exon
subclass of: SO_0000010

position:545582:-1
position: 545582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546451:-1
position: 546451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545582-546451:-1:exon

HMPREF0389_RS02415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02415
old locus tag: HMPREF0389_00153
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003037566.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bro-N domain-containing protein
translation: MDEIKLYENKEIRSVWDEEKEEWYFSVVDVVGVLSESKNPTDYLKKMRKRDEQLAFYIGTNCPQVEMKSSSGKKRKILAGNMKDIFRIIQSIPSPKAEPFKLWLAEVGKERIDEIVDPELTIDRALETYLKKGYSREWINQRLQAIQVRKELTDAWEDHGIEKGIEYAILTDEITKAWSGMTTRGYKNLKGLKKENLRDNMTTLEVVLNMLAEATTTELTKTTNPKGLEENRKVAKRGGSIAGNARKEIEKETGKPVITSKNAVDMSKLIEDVVKDPIIENTNSEDKKE
SIO_010081: HMPREF0389_RS02415
subclass of: SO_0000673
so part of: HMPREF0389_RS02415
location: complement(545582..546451)
location: region:545582-546451:-1
so has part: feature:545582-546451:-1:exon

WP_003037566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:545582-546451:-1:exon

HMPREF0389_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02420
old locus tag: HMPREF0389_00152
so part of: sequence
location: complement(546551..547516)
location: region:546551-547516:-1
so has part: feature:546551-547516:-1:exon
subclass of: SO_0000010

position:546551:-1
position: 546551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547516:-1
position: 547516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546551-547516:-1:exon

HMPREF0389_RS02420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02420
old locus tag: HMPREF0389_00152
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009531265.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB N-terminal domain-containing protein
translation: MSKKLVKREITDAVDILLDGVGVLEQGDIQDIEIDLLEAYHDHPFTLYTGKRLEDMVDSIRENGILSPIIVLKKEDGAYEILSGHNRVNAARIAKIKSIPCIIKENLSEEEAYTYVIETNLMQRSFSDLLPTEKALVLKVRYEKIASQGKRNDLQKEINNLDRGIIEKESKAEDKTNSRKSLGKEYHLSGASIARYLRLNELSNSWKQDVDNEKIGLTMAVDLSYLSKEIQDYLYQQCEELELTLKSSDTKALHLMNRQEELNKEMITTYLLNLKKPKMKEYQNIKLSQSIYQKFFQDKAKEEAEEIIEKALEIYFKEYLR
SIO_010081: HMPREF0389_RS02420
subclass of: SO_0000673
so part of: HMPREF0389_RS02420
location: complement(546551..547516)
location: region:546551-547516:-1
so has part: feature:546551-547516:-1:exon

WP_014262141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546551-547516:-1:exon

HMPREF0389_RS02425
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02425
old locus tag: HMPREF0389_00151
so part of: sequence
location: complement(547509..548288)
location: region:547509-548288:-1
so has part: feature:547509-548288:-1:exon
subclass of: SO_0000010

position:547509:-1
position: 547509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548288:-1
position: 548288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547509-548288:-1:exon

HMPREF0389_RS02425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02425
old locus tag: HMPREF0389_00151
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009525587.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MAEIITVANRKGGVGKTTTTLNLAYSLKELGKKVFVIDLDPQANLTRCFGIENTNELADTIGHLLMAELEEEENYSVEEYILSYDDIDLIPSSIYLSVTETQMKSETGSERILSSILEPMREQYDYILIDTSPSLNILTINALCASDSVLITADTQLFAIVGISELLKTIQKIKKRVNASLTIKGILLTMCDNRTNLSKLLTQQVEEMYQGKIEVFQTKIPKTVKVGEAIYSGQSIKKYAKGSSVDIAYDNLAKEICYE
SIO_010081: HMPREF0389_RS02425
subclass of: SO_0000673
so part of: HMPREF0389_RS02425
location: complement(547509..548288)
location: region:547509-548288:-1
so has part: feature:547509-548288:-1:exon

WP_014262142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547509-548288:-1:exon

HMPREF0389_RS02430
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02430
old locus tag: HMPREF0389_00150
pseudo: true
so part of: sequence
location: complement(<548464..548862)
location: region:548464-548862:-1
so has part: feature:548464-548862:-1:exon
subclass of: SO_0000010

position:548464:-1
position: 548464
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:548862:-1
position: 548862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548464-548862:-1:exon

HMPREF0389_RS02430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02430
old locus tag: HMPREF0389_00150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000588832.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nucleoside triphosphate hydrolase
SIO_010081: HMPREF0389_RS02430
subclass of: SO_0000673
so part of: HMPREF0389_RS02430
location: complement(<548464..548862)
location: region:548464-548862:-1
so has part: feature:548464-548862:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:548464-548862:-1:exon

HMPREF0389_RS02435
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02435
old locus tag: HMPREF0389_00149
so part of: sequence
location: complement(548859..549626)
location: region:548859-549626:-1
so has part: feature:548859-549626:-1:exon
subclass of: SO_0000010

position:548859:-1
position: 548859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549626:-1
position: 549626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548859-549626:-1:exon

HMPREF0389_RS02435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02435
old locus tag: HMPREF0389_00149
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018365310.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MDFDYFYNREAERFNFLKVPEILVDGEEFRGLSAEAIILYSMLLKRTGMSFKNNWIDKEGRVFIYFTVEEIMKRRNLSKPTAIKILDELDVKKGIGLIERVRLGLGKPNIIYVKDFMSISEVKETDLLKLKTFTSEVKNIDLRSKENELQEVKTLYPNYIDNNKSEYSKRDFMKLGTFQNVFLTAEDVSELQITMNGQLDNYIERLSSYSKSTGKTYKDHKATILSWFYKDQGTKKADKTSNIPTWEEYDKGEHL
SIO_010081: HMPREF0389_RS02435
subclass of: SO_0000673
so part of: HMPREF0389_RS02435
location: complement(548859..549626)
location: region:548859-549626:-1
so has part: feature:548859-549626:-1:exon

WP_041250762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548859-549626:-1:exon

HMPREF0389_RS02440
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02440
old locus tag: HMPREF0389_00148
so part of: sequence
location: complement(549710..549991)
location: region:549710-549991:-1
so has part: feature:549710-549991:-1:exon
subclass of: SO_0000010

position:549710:-1
position: 549710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549991:-1
position: 549991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549710-549991:-1:exon

HMPREF0389_RS02440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02440
old locus tag: HMPREF0389_00148
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001267199.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CD1845 family protein
translation: MKWIIKIILFPISLSLSILTAFLTFLLSVGTAILYLLMLMCVVVGVVSLFQKNFAIGIEALILGFLLSPYGIPMIGAAIIAFIQGINEAIKSI
SIO_010081: HMPREF0389_RS02440
subclass of: SO_0000673
so part of: HMPREF0389_RS02440
location: complement(549710..549991)
location: region:549710-549991:-1
so has part: feature:549710-549991:-1:exon

WP_041250947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:549710-549991:-1:exon

HMPREF0389_RS02445
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: lysS
locus tag: HMPREF0389_RS02445
old locus tag: HMPREF0389_00147
so part of: sequence
location: complement(550225..551730)
location: region:550225-551730:-1
so has part: feature:550225-551730:-1:exon
subclass of: SO_0000010

position:550225:-1
position: 550225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551730:-1
position: 551730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550225-551730:-1:exon

HMPREF0389_RS02445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: lysS
locus tag: HMPREF0389_RS02445
old locus tag: HMPREF0389_00147
EC number: 6.1.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009526720.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysine--tRNA ligase
translation: MEQNQTPMSEFTKIRLEKLIQLQEKGRDPFVNEKFDYTHHSVDIIDKFEELEEKDVSIAGRIMLIRGHGKASFLTIQDSEGRIQVYVRQDVVGEESYTDFKTYDIGDIIGVTGTVFRTHKGEITVKAKEVTLLTKSLHPLPDKHAGLKDPDLRYRQRYVDLIVNPEVKESFIKRSKAIKALKEYLDNRGFLEVDTPILSTIAGGANARPFKTHHNTLNLEMYMRIANELYLKRLIVGGFEKVYEMGRMFRNEGMDINHNPEYTAIEIYQAYVDYEEIMRLTEGIVSYMAEKSTGSMVVDYQGTEIDFTPPWRRISMIDAVKEYVGVDFNKIDTDEEAIAIAKEKGIELTPATMTRGHIISLFFEEFCEEHMVQPTFVTGHPVEISPLSKRDPLDTRLTHRFEAFANRWEIANAFSELNDPVDQRQRFEDQMRQKELGDDEAHEMDEDFLNAIEVGLPPTGGLGIGVDRVIMLLTNASSIRDVILFPTMKPIGKKDEENQDL
SIO_010081: HMPREF0389_RS02445
subclass of: SO_0000673
so part of: HMPREF0389_RS02445
location: complement(550225..551730)
location: region:550225-551730:-1
so has part: feature:550225-551730:-1:exon

WP_041250948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:550225-551730:-1:exon

HMPREF0389_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: greA
locus tag: HMPREF0389_RS02450
old locus tag: HMPREF0389_00146
so part of: sequence
location: complement(551751..552224)
location: region:551751-552224:-1
so has part: feature:551751-552224:-1:exon
subclass of: SO_0000010

position:551751:-1
position: 551751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552224:-1
position: 552224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551751-552224:-1:exon

HMPREF0389_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: greA
locus tag: HMPREF0389_RS02450
old locus tag: HMPREF0389_00146
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003514606.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO process: GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription elongation factor GreA
translation: MLSNEEALITQSGYQKIEEELEYLKATRRLEVAERIKVALSFGDISENAEYDEAKNEQAQLEERISKLENILRTAVIVDESKLEHDVVNIGSWVKLDYEGEIEEYTIVGSAESDPSSSKISNEAPIGKALMGRREGESIEVQVPNGVVNIKILEVRR
SIO_010081: HMPREF0389_RS02450
subclass of: SO_0000673
so part of: HMPREF0389_RS02450
location: complement(551751..552224)
location: region:551751-552224:-1
so has part: feature:551751-552224:-1:exon

WP_207635087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:551751-552224:-1:exon

HMPREF0389_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: dusB
locus tag: HMPREF0389_RS02455
old locus tag: HMPREF0389_00145
so part of: sequence
location: complement(552361..553320)
location: region:552361-553320:-1
so has part: feature:552361-553320:-1:exon
subclass of: SO_0000010

position:552361:-1
position: 552361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553320:-1
position: 553320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552361-553320:-1:exon

HMPREF0389_RS02455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: dusB
locus tag: HMPREF0389_RS02455
old locus tag: HMPREF0389_00145
EC number: 1.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018590158.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA dihydrouridine synthase DusB
translation: MKIGNYETKGNIFLAPMAGINDFPFRLMCHRYGAVLTYTEMINAKALCYGDENTWKMMQVHPDEGDVAIQIFGNEPEFIAEAVRKIEQLSRFVLIDINMGCPAPKVVKNGDGSALMKKPELAQKIVETAKQNTILPVTVKFRKGWDSTQVNALEFAKQMQEAGADAVTVHGRTREEFYSGVADWNIVKEIKKALYIPVIGNGDIKDQETFEERVKLSSVDAVMIGRGAQGNPFLFNSLVRNGPKKENVPFQEIYDIVKEHYELEAEYKGIDKAVREMRKHIGWYIKGLPMAAKVRNEINQTTDIQTAQKLLTEYFEHLT
SIO_010081: HMPREF0389_RS02455
subclass of: SO_0000673
so part of: HMPREF0389_RS02455
location: complement(552361..553320)
location: region:552361-553320:-1
so has part: feature:552361-553320:-1:exon

WP_014262148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552361-553320:-1:exon

HMPREF0389_RS02460
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02460
old locus tag: HMPREF0389_00144
so part of: sequence
location: complement(553333..554103)
location: region:553333-554103:-1
so has part: feature:553333-554103:-1:exon
subclass of: SO_0000010

position:553333:-1
position: 553333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554103:-1
position: 554103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553333-554103:-1:exon

HMPREF0389_RS02460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02460
old locus tag: HMPREF0389_00144
EC number: 2.7.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002842908.1
GO function: GO:0004594 - pantothenate kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III pantothenate kinase
translation: MLLVIDVGNTNIVFGAYKGRKLVMTFRMGTNKSKTSDEYGVVIKEIFVMNGYELSEIKDVIISSVVPDVMHALESFVIRYCKSTPIIVGPGVKTGMNIKYENPQEVGADRIVNAVAGIEKYGAPLVIIDFGTATTFCAVNSKKEYLGGAISPGIKISSQALFDRASKLPKVEIVEPRAVIGKTTVSAMQAGIFFGYVGLVKNIVQQMKKEVGDNATVVATGGLASLICANMEEVDYVDKNLTLEGLRIIYHKNVSE
SIO_010081: HMPREF0389_RS02460
subclass of: SO_0000673
so part of: HMPREF0389_RS02460
location: complement(553333..554103)
location: region:553333-554103:-1
so has part: feature:553333-554103:-1:exon

WP_014262149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:553333-554103:-1:exon

HMPREF0389_RS02465
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02465
old locus tag: HMPREF0389_00143
so part of: sequence
location: complement(554119..555072)
location: region:554119-555072:-1
so has part: feature:554119-555072:-1:exon
subclass of: SO_0000010

position:554119:-1
position: 554119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555072:-1
position: 555072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554119-555072:-1:exon

HMPREF0389_RS02465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02465
old locus tag: HMPREF0389_00143
EC number: 6.3.4.15
inference: COORDINATES: protein motif:HMM:TIGR00121.1
GO function: GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin--[acetyl-CoA-carboxylase] ligase
translation: MKREIIDLLCQKEDYFISGEEMAEQLNMTRANVWKYIKELRNSGFEIESATKKGYILKSVGMQLNEDTIYYCFKKQDFVKNILFFSSIDSTNDFLKYNREEFPDHTLVVSTLQTKGRGRRTREFLSEEGGLYFSFMMRNTMNMQEVSFITSLAAVAVNRALLSLGIDTEIKWPNDIFLHDKKLCGILTEMVTDMEGYNKIIIGIGINISNGFPKELKEIAISLSEAGYQINEITFLLKLFSEFGILYKKFEQGDREEALRVLREKSYLMGKEICFLKDAVEQKGTVVGLEESGNLVVRLSNQNDIALNSGEVTILKK
SIO_010081: HMPREF0389_RS02465
subclass of: SO_0000673
so part of: HMPREF0389_RS02465
location: complement(554119..555072)
location: region:554119-555072:-1
so has part: feature:554119-555072:-1:exon

WP_041250763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:554119-555072:-1:exon

HMPREF0389_RS08700
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS08700
old locus tag: HMPREF0389_00142
so part of: sequence
location: complement(555128..555487)
location: region:555128-555487:-1
so has part: feature:555128-555487:-1:exon
subclass of: SO_0000010

position:555128:-1
position: 555128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555487:-1
position: 555487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555128-555487:-1:exon

HMPREF0389_RS08700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS08700
old locus tag: HMPREF0389_00142
inference: COORDINATES: protein motif:HMM:NF018058.2
GO component: GO:0005886 - plasma membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LapA family protein
translation: MKNMKTISLLLAIIFVSAFAVQNSMSVVIRFLLWKLEISQALVIVLTAVMGVLIGLGLSVVKSWRYSRDIKQANNEKQSAQVSVMSLEKENAELKLNINELEKRLKELEKTEHHEILEK
SIO_010081: HMPREF0389_RS08700
subclass of: SO_0000673
so part of: HMPREF0389_RS08700
location: complement(555128..555487)
location: region:555128-555487:-1
so has part: feature:555128-555487:-1:exon

WP_014262151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:555128-555487:-1:exon

HMPREF0389_RS02475
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02475
old locus tag: HMPREF0389_00141
so part of: sequence
location: complement(555511..555900)
location: region:555511-555900:-1
so has part: feature:555511-555900:-1:exon
subclass of: SO_0000010

position:555511:-1
position: 555511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555900:-1
position: 555900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555511-555900:-1:exon

HMPREF0389_RS02475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02475
old locus tag: HMPREF0389_00141
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNETIVVFSATQFTSQQLEELKYYFGIYKIQPLPLQLYKRWTNVNPMGTLDVKDLKPLVEFLIEKKKEGIKYVYFDGDKGMEFYMIRCALEIGMIPLYSTEYQTVESKDGERVKKHISFRAYHDYDRVR
SIO_010081: HMPREF0389_RS02475
subclass of: SO_0000673
so part of: HMPREF0389_RS02475
location: complement(555511..555900)
location: region:555511-555900:-1
so has part: feature:555511-555900:-1:exon

WP_014262152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:555511-555900:-1:exon

HMPREF0389_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02480
old locus tag: HMPREF0389_03001
so part of: sequence
location: complement(556104..556179)
location: region:556104-556179:-1
so has part: feature:556104-556179:-1:exon
subclass of: SO_0000663

position:556104:-1
position: 556104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556179:-1
position: 556179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556104-556179:-1:exon

HMPREF0389_RS02480
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 546269
locus tag: HMPREF0389_RS02480
old locus tag: HMPREF0389_03001
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(556144..556146),aa:Thr,seq:cgt)
SIO_010081: HMPREF0389_RS02480
subclass of: SO_0000673
so part of: HMPREF0389_RS02480
location: complement(556104..556179)
location: region:556104-556179:-1
so has part: feature:556104-556179:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:556104-556179:-1:exon

HMPREF0389_RS02485
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02485
old locus tag: HMPREF0389_00140
so part of: sequence
location: complement(556298..556993)
location: region:556298-556993:-1
so has part: feature:556298-556993:-1:exon
subclass of: SO_0000010

position:556298:-1
position: 556298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556993:-1
position: 556993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556298-556993:-1:exon

HMPREF0389_RS02485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02485
old locus tag: HMPREF0389_00140
inference: COORDINATES: protein motif:HMM:NF013346.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TMEM165/GDT1 family protein
translation: MKDFLSAVVLIFVAEMGDKTQLLAFALSTQYHYRTVLIGVLLGAFLNHGLAILFAHIVSKFSSMQYLQMVSSILFIVFGLISLNTDKKPDEAGACYRSTNFGIIATIAMCFFVGELGDKTQLTTMTLGLRTIHPILTLLGSSIGMVLVSSVGILAGKTFSSRINSSCISLLSSGIFLIFGLGSIIKLYVSDILGKEVTFLIVGITVFTVLFFLYREYRRKNMGCEDNHVIK
SIO_010081: HMPREF0389_RS02485
subclass of: SO_0000673
so part of: HMPREF0389_RS02485
location: complement(556298..556993)
location: region:556298-556993:-1
so has part: feature:556298-556993:-1:exon

WP_014262153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:556298-556993:-1:exon

HMPREF0389_RS08705
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS08705
old locus tag: HMPREF0389_00139
so part of: sequence
location: 557298..558197
location: region:557298-558197:1
so has part: feature:557298-558197:1:exon
subclass of: SO_0000010

position:557298:1
position: 557298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558197:1
position: 558197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557298-558197:1:exon

HMPREF0389_RS08705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS08705
old locus tag: HMPREF0389_00139
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNAYQNPFTISDNIGNNEFSHSLRTRKKIEISKLEETSLFLFEESKHIAFCEFDKEKNKDCCMNGIYPFVYDTKYNAYLFDNHNHAFYFIYHHYLHGAKWDTLIHVDQHKDSRIPKLSFLEFQSYCKSFFQNNRIEMIVPVDAHRVLFEKIIFEVAGAMLKKPYHISSSSKTLYFPEFELEIPSSPIEQDDFIAWIYTNFVLNVGNFIPPLLKTNIFKSYYCVDSSYTLEQIASVDLSDMVLDLDLDFFSKDMDYIPFKKKKNIVKELIQKSKLITIATSPYFIELNDCKKVLHELFQD
SIO_010081: HMPREF0389_RS08705
subclass of: SO_0000673
so part of: HMPREF0389_RS08705
location: 557298..558197
location: region:557298-558197:1
so has part: feature:557298-558197:1:exon

WP_014262154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:557298-558197:1:exon

HMPREF0389_RS02495
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02495
old locus tag: HMPREF0389_00138
so part of: sequence
location: complement(558265..559074)
location: region:558265-559074:-1
so has part: feature:558265-559074:-1:exon
subclass of: SO_0000010

position:558265:-1
position: 558265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559074:-1
position: 559074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558265-559074:-1:exon

HMPREF0389_RS02495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02495
old locus tag: HMPREF0389_00138
EC number: 3.6.1.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013361133.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO process: GO:0016311 - dephosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyl-diphosphate phosphatase
translation: MIEFLKVFILGIVEGVTEFLPISSTGHLILVHQFFSLSPENFSNAFDVIIQFGAILSVVTIYFKELNPFSKEKNAEQKKSAVSLWKKVIIGVMPAIVLGLLFDDLIDKYLFNPISVAVMLVFWGIGIIILEKKSKSVFQFNTVHDISCKTAFMIGLFQCLAMIPGTSRSAATIIGAMILGCSRTTAAEFSFFLAIPTMLGATMLKVLKVGLHFDLFQWFLVLFGSVISYIVAILVIQKLMSYIKKHDFQFFGYYRIVLGILVLIFSFFH
SIO_010081: HMPREF0389_RS02495
subclass of: SO_0000673
so part of: HMPREF0389_RS02495
location: complement(558265..559074)
location: region:558265-559074:-1
so has part: feature:558265-559074:-1:exon

WP_014262155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558265-559074:-1:exon

HMPREF0389_RS02500
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: nifJ
locus tag: HMPREF0389_RS02500
old locus tag: HMPREF0389_01687
so part of: sequence
location: complement(559341..562883)
location: region:559341-562883:-1
so has part: feature:559341-562883:-1:exon
subclass of: SO_0000010

position:559341:-1
position: 559341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562883:-1
position: 562883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559341-562883:-1:exon

HMPREF0389_RS02500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: nifJ
locus tag: HMPREF0389_RS02500
old locus tag: HMPREF0389_01687
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012159803.1
GO function: GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO process: GO:0022900 - electron transport chain [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate:ferredoxin (flavodoxin) oxidoreductase
translation: MSKKIMKTMDGNTAAAYCSYAFSEVACIYPITPSSTMAELVDEWSANEKKNLFGEPVKVVEMQSEAGAAGALHGSLSAGALTTTYTASQGLLLMIPNMYKIAGELLPGVFHVSARAIASHALSIFGDQTDVMSVRQTGFALLATGSVQEVMDLAGVAHLASIKSSIPFLHFFDGFRTSHEIQKIEQIDYEVFERLLDKKSLLRFRKKSLNPERPYTKGSAQNPDIFFQNRESINRFYDAIPDIVNEYMKEISKETGRQYKPFNYYGAADAEYIVVAMGSVTEALEETVDYLNERGQKTGLIKVHLYRPFSEKYFFDVMPKTVKAITVLDRTKEVGASAEPLHLDVLNMFYGKEHKPVILGGRYGLGSKDTTPSHLLSVFTNMQKGQPKNHFTLSIIDDVTHLSLPVEELIDTSSKGTMRCKFWGLGSDGTVGANKAAIKIIGDNTDLYAQGYFDYDSKKSGGITVSHLRFGKQPIRSTYLIDQADFIACHNQSYVTRYDLLKGLRNGGTFVLNTQWSDEELDTKLPHKMKKYLAEKNIQFYTVDAVKIGQELGLGNHINMIMQAVFFELTKVIPVEQANQYLKEAIQQTYAKKGEDIVQINCMAIDKGQEALHQVIIPESWNHIAEDETAIEHKEEPDYIKNILRPVTALQGNDIPVSAFVGIEEGKIPAGTSQYEKRGIAVKVPCWNPENCVQCNQCSFVCPHAVIRPFLMTEEETKRYGAKGIPANGKGLEGYRYRIQISPLDCTGCGNCADVCPGKKGKKALVMESIDDHIQEHDIFMNLHENVGYKENVMDRMSVKGSQFAQPLLEFSGACAGCGETPYAKVVTQLFGERMVIANATGCSSIWGASSPASVYTANMEGHGPAWANSLFEDNAEYGLGIRIAVKAIRKELQQKLSLLKELTSHEKLRDTIEDYLNVIGNAEQEKLFSKEMIKLLSEENYSAEEKVLVDVVLKQKEYLVDKSVWIFGGDGWAYDIGYGGLDHVIASGENVNILVFDTEVYSNTGGQSSKATPIGAVAKFAASGKRINKKDLGMIATAYGYVYVAQVGIGADKGQFVKALKEAEAYDGPALIIAYAPCINHGLKDGMGKTQQNIKEAVECGYWHLYRYNPLLKTQGKNPFVLDSKEPTASFREFLDKQVRYTSLKTEFPAIAEELYARAEEAAKEKYKKYKKLASMSIE
SIO_010081: HMPREF0389_RS02500
subclass of: SO_0000673
so part of: HMPREF0389_RS02500
location: complement(559341..562883)
location: region:559341-562883:-1
so has part: feature:559341-562883:-1:exon

WP_041250764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559341-562883:-1:exon

HMPREF0389_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: nifU
locus tag: HMPREF0389_RS02505
old locus tag: HMPREF0389_00135
so part of: sequence
location: complement(563195..563623)
location: region:563195-563623:-1
so has part: feature:563195-563623:-1:exon
subclass of: SO_0000010

position:563195:-1
position: 563195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563623:-1
position: 563623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563195-563623:-1:exon

HMPREF0389_RS02505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: nifU
locus tag: HMPREF0389_RS02505
old locus tag: HMPREF0389_00135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018589673.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S cluster assembly scaffold protein NifU
translation: MLYTEKVMDHFNNPRNVGEIPDADGIGEVGNAKCGDIMRMYLKIKDNRIEDVKFKTYGCGSAIASSSMATEMIKGKTIDEVLEVTNKAVAEALDGLPPVKMHCSVLAEEAVVAALQDYAKKNNLEIPGITDRVLEDHEHDHE
SIO_010081: HMPREF0389_RS02505
subclass of: SO_0000673
so part of: HMPREF0389_RS02505
location: complement(563195..563623)
location: region:563195-563623:-1
so has part: feature:563195-563623:-1:exon

WP_014262157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:563195-563623:-1:exon

HMPREF0389_RS02510
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: nifS
locus tag: HMPREF0389_RS02510
old locus tag: HMPREF0389_00134
so part of: sequence
location: complement(563623..564810)
location: region:563623-564810:-1
so has part: feature:563623-564810:-1:exon
subclass of: SO_0000010

position:564810:-1
position: 564810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563623-564810:-1:exon

HMPREF0389_RS02510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: nifS
locus tag: HMPREF0389_RS02510
old locus tag: HMPREF0389_00134
EC number: 2.8.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012159522.1
GO function: GO:0031071 - cysteine desulfurase activity [Evidence IEA]
GO process: GO:0006520 - amino acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine desulfurase NifS
translation: MDRKYVYMDNSATTAVKQEVLDQMMPIFTEIYGNPSSIHQVGQIAKVYVDKARMQVASLLNASLDEIYFTAGGSESDNWALKGVAEKYRKKGNHIITTKIEHHAILHTCEYLEKQGYEVTYLDVDEYGVVDLEQLKKSITDQTILISVMFANNEIGTIQPIEEIGKIAKERKILFHTDAVQAIGNVDIDVHKLNIDMLSMSGHKIHAPKGIGVLYIRKGLILPNLIHGGAQERKRRAGTENVPGIVGLGKACEIAKQHMENHIAHCTKLRDRLIEKVTQKIPYTLVTGSLEHRLPGLASFCFKYIEGEALLLSLDMKGIAGSSGSACTSGSLDPSHVLMALGLKHEIAHGSLRLSLSDFNTEEEVDYVVEELAVIVQRLRNMSPLYDEVLKGENE
SIO_010081: HMPREF0389_RS02510
subclass of: SO_0000673
so part of: HMPREF0389_RS02510
location: complement(563623..564810)
location: region:563623-564810:-1
so has part: feature:563623-564810:-1:exon

WP_014262158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:563623-564810:-1:exon

HMPREF0389_RS02515
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02515
old locus tag: HMPREF0389_00133
so part of: sequence
location: complement(564826..565269)
location: region:564826-565269:-1
so has part: feature:564826-565269:-1:exon
subclass of: SO_0000010

position:564826:-1
position: 564826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565269:-1
position: 565269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564826-565269:-1:exon

HMPREF0389_RS02515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02515
old locus tag: HMPREF0389_00133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003376170.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rrf2 family transcriptional regulator
translation: MKLSTKGRYGLKAMYDLAVYEDLHEPISLKAIASNNNLSEQYLEQIFSKLKKSGLVNSVRGAQGGYVLSRSSKEITVGDIIRVLDGPIAPSMCLLEEVGPCISGKDCPTRAVWKKIKDSVDDVIDNITLYDMVIEHKLIKSDSILNG
SIO_010081: HMPREF0389_RS02515
subclass of: SO_0000673
so part of: HMPREF0389_RS02515
location: complement(564826..565269)
location: region:564826-565269:-1
so has part: feature:564826-565269:-1:exon

WP_014262159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564826-565269:-1:exon

HMPREF0389_RS02520
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02520
old locus tag: HMPREF0389_00132
so part of: sequence
location: 565582..565929
location: region:565582-565929:1
so has part: feature:565582-565929:1:exon
subclass of: SO_0000010

position:565582:1
position: 565582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565929:1
position: 565929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565582-565929:1:exon

HMPREF0389_RS02520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02520
old locus tag: HMPREF0389_00132
inference: COORDINATES: protein motif:HMM:NF009150.0
GO function: GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YraN family protein
translation: MKNTKQLGNFGETEASNYLKSKRYVILDRNFRIRQGEIDIIALQQNILCFIEVKTRKNSDFGLACEAVNYKKQQKIRFVASVYLSTHKIKYKEIRFDVIEIYTDTQEIIHLENTF
SIO_010081: HMPREF0389_RS02520
subclass of: SO_0000673
so part of: HMPREF0389_RS02520
location: 565582..565929
location: region:565582-565929:1
so has part: feature:565582-565929:1:exon

WP_014262160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565582-565929:1:exon

HMPREF0389_RS02525
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02525
old locus tag: HMPREF0389_00131
so part of: sequence
location: 566015..567538
location: region:566015-567538:1
so has part: feature:566015-567538:1:exon
subclass of: SO_0000010

position:566015:1
position: 566015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567538:1
position: 567538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566015-567538:1:exon

HMPREF0389_RS02525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02525
old locus tag: HMPREF0389_00131
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009525012.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YifB family Mg chelatase-like AAA ATPase
translation: MFFKSLSSGIEGIEGYIVNVEADVSKGIPNFTMVGLPDTAVKESKERIHSAILNSGLKFPNKKIVINLSPSSVKKEGSHYDLPIALSILSSEYRFLEERFANTMFFGELSLDGTLQKVNGTIPFIIAARECPSVNSVIFPKENSMEAQVVKDIKLLTASSLNEIVSYLMGVDELEEVSPISFNPSFQNEYDFSDVKGNLIAKRSAEISAAGYHNMLFIGPPGSGKSMIAKRLPSIMNPLNEEEYIQVSKIYSSTGKFNKNLLNRVRPFRSPHHTATMKSIIGGGQNSTPGEVVLAHKGILFIDELLEFEKKTLEALRQPIEDKYVNISRIKNSYQYPCDFILVAATNPCPCGNYLNPFKECVCTEYQIRNYLGRASAPLLDRFDLFTEMTPIEFDELHTTIASESSEEIYKRVYSAIEIQKERFKKEDFCYNALIPAKYISKYCHLGKTESDFIRTAFEKFSFSLRSYHKVLRVARTIADLDQEDSISIVHLSEAVSFRKALLKYWG
SIO_010081: HMPREF0389_RS02525
subclass of: SO_0000673
so part of: HMPREF0389_RS02525
location: 566015..567538
location: region:566015-567538:1
so has part: feature:566015-567538:1:exon

WP_014262161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:566015-567538:1:exon

HMPREF0389_RS02530
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: dprA
locus tag: HMPREF0389_RS02530
old locus tag: HMPREF0389_00130
so part of: sequence
location: 567544..568626
location: region:567544-568626:1
so has part: feature:567544-568626:1:exon
subclass of: SO_0000010

position:567544:1
position: 567544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568626:1
position: 568626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567544-568626:1:exon

HMPREF0389_RS02530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: dprA
locus tag: HMPREF0389_RS02530
old locus tag: HMPREF0389_00130
inference: COORDINATES: protein motif:HMM:TIGR00732.1
GO process: GO:0009294 - DNA-mediated transformation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-processing protein DprA
translation: MFNIFLIFSIATISAEQFQYILNEVGSIDDIQLLTQASIRELKSVSQKKKSDIESAFEKYEDFVKELQVQEIEYITIAMQNYPTALKELYDFPYILYFKGNLSLLQQFSIGIIGSRKPDAYGVFCADFFGKILAENGIITVSGMAHGIDGISQKSTVNYGGKTIAVLGSSLNEKSIYPKTNLSLYHRILNNGGLILSEYHHRESTLPYKFVARNRIISAICSGLIVVEANFKSGTMTTVEFALELGKTIFSVPGNINSSNSNGTNQLIKNGAKIVTCFEDILEEFPNITPLCSALSKSSNLSEAEQNILSLLEKKSPIYIDEIAYTLQLQIKEVSSILSILEIKGFVLEMGNNLYSLTSI
SIO_010081: HMPREF0389_RS02530
subclass of: SO_0000673
so part of: HMPREF0389_RS02530
location: 567544..568626
location: region:567544-568626:1
so has part: feature:567544-568626:1:exon

WP_014262162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:567544-568626:1:exon

HMPREF0389_RS02535
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: topA
locus tag: HMPREF0389_RS02535
old locus tag: HMPREF0389_00129
so part of: sequence
location: 568956..571025
location: region:568956-571025:1
so has part: feature:568956-571025:1:exon
subclass of: SO_0000010

position:568956:1
position: 568956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571025:1
position: 571025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568956-571025:1:exon

HMPREF0389_RS02535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: topA
locus tag: HMPREF0389_RS02535
old locus tag: HMPREF0389_00129
EC number: 5.6.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007287285.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I DNA topoisomerase
translation: MAKNLVIVESPAKAKTIEKFLGKKNYTVKASVGHIRDLPKSKLGVDVEQNFEPQYITIRGKGDIVKDLKKEAKKADFVYLATDQDREGEAISWHLAYLLDLDINDNNRITFNEITKDAIKKAIKSPRKIDLDLVDAQQARRIIDRLVGYKISPILWIKVRKGLSAGRVQSVSTRLIVEREEEIRAFTPEEYWTIDATVTGEDKRKAVFKLTEKNNKKIELHSEEETKLVLKDLHKKDMLIDKIDSKEKKRSAPKPFTTSLLQQEAGNKISFSSKRTMSAAQQLYEGVTVKGEGTVGLITYIRTDSQRISEEALASSKKYIEETFGKNYYQKYSSPKKKNSSIQDAHECIRPTSIYRTPESVKDSLTTDQYKLYKLIWERFVAASMSSAIFHTDTVLGSIDDYQFKVSGSTLVFDGFLKVYSYSKAEEQEIPNFVEKQYYKVNKLTDKQHFTQPPARYTEATLIKTLEELGIGRPSTYSPTISTILQREYVKKEKNFLIPTELGEIVTSIMKENFKNIVDVDFTADMEKQLDSVEEGTLPWKSVVEKIYTPLIEDVTVAEENLEKVLLQEKTDEKCPVCNEEMVVKYGRFGKFLACKNYPECTGTKPYLEKIGMPCPDCEDGEVIIRRSKKGRIFYGCSNFPNCSFVSWNRPTGKKCPECQENLVEKVTKKGTQIVCSSKTCSYKEEVKQ
SIO_010081: HMPREF0389_RS02535
subclass of: SO_0000673
so part of: HMPREF0389_RS02535
location: 568956..571025
location: region:568956-571025:1
so has part: feature:568956-571025:1:exon

WP_014262163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:568956-571025:1:exon

HMPREF0389_RS02540
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: codY
locus tag: HMPREF0389_RS02540
old locus tag: HMPREF0389_00128
so part of: sequence
location: 571200..571982
location: region:571200-571982:1
so has part: feature:571200-571982:1:exon
subclass of: SO_0000010

position:571200:1
position: 571200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571982:1
position: 571982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571200-571982:1:exon

HMPREF0389_RS02540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: codY
locus tag: HMPREF0389_RS02540
old locus tag: HMPREF0389_00128
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002844056.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTP-sensing pleiotropic transcriptional regulator CodY
translation: MSSVLLQKTRTINKFLQNSGNKPVSFSVLSDTLNEVLSSNVYILSSKGKVLGSSFTHEADSSIVLDENSGEEKLPQDYIDNVNKASETIANLTKESLLSVFKGDIGSYNKYATIVPIVGGGDRLGTLILSRYDKEFSDDDLILAEYSATVVGMEILRSKSEEIEEEMRNKAVVQMAIGTLSYSELEAVIHIFNELNGSEGLLVASKVADRAGITRSVIVNALRKFESAGVIESRSLGMKGTHIKVLNDKLLDELKKHGIN
SIO_010081: HMPREF0389_RS02540
subclass of: SO_0000673
so part of: HMPREF0389_RS02540
location: 571200..571982
location: region:571200-571982:1
so has part: feature:571200-571982:1:exon

WP_014262164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:571200-571982:1:exon

HMPREF0389_RS02545
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02545
old locus tag: HMPREF0389_00127
so part of: sequence
location: 572250..573512
location: region:572250-573512:1
so has part: feature:572250-573512:1:exon
subclass of: SO_0000010

position:572250:1
position: 572250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573512:1
position: 573512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572250-573512:1:exon

HMPREF0389_RS02545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02545
old locus tag: HMPREF0389_00127
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013361709.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication-associated recombination protein A
translation: MNTPFAEIVRPHSIEQVVGQSHIIGKNKLINRLIEQKQMINLIFYGPPGTGKTTVAEILAKNSDLSYYKLNATYSKTQDIRDIAENINTFSGINGILIYIDEIQNFNKKQQQLLLEYIEKGQIILIASTTENPYHQIYKSLLSRCTVIEFFSLDDRAIREGIYHALENLQNNGYTIQYEDSVLNMLVVFSSGDLRKGLNTLGTMVQLYSENNELSITKELIETVATSKALLYDKNSDEHYDLLSALQKSIRGSDVNAALHYLARLLESGDIISPSRRLLVMASEDIGMAYPQAISIVKSCIDSAFYLGLPEARLPLAQATILLATSPKSNSGIVAIDSAISDLKTVSTYDIPLHLKDSHYVGAEHLNRGIGYLYPHDFENSYVKQQYLPDTLKDTVYYHPKNNKMENMIQEHFKKILPKK
SIO_010081: HMPREF0389_RS02545
subclass of: SO_0000673
so part of: HMPREF0389_RS02545
location: 572250..573512
location: region:572250-573512:1
so has part: feature:572250-573512:1:exon

WP_014262165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:572250-573512:1:exon

HMPREF0389_RS02550
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02550
old locus tag: HMPREF0389_00126
so part of: sequence
location: 573539..575005
location: region:573539-575005:1
so has part: feature:573539-575005:1:exon
subclass of: SO_0000010

position:573539:1
position: 573539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575005:1
position: 575005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573539-575005:1:exon

HMPREF0389_RS02550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02550
old locus tag: HMPREF0389_00126
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013362124.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminoacyl-histidine dipeptidase
translation: MAIINFEPKRVFHYFEEISKIPRESHHEEKISNYLVEFAKKHDFSYTQDEFYNVIIHKPATSGYEDCATVMLQGHMDMVCEKEEDSTHNFDTDPIELHVDGDFIKANRTTLGADNGIAVAMTLAILDSHDIAHPNLEAVFTVQEETGLVGATHLDTSTLKAKYLINIDSEEEGELLTSCSGGVRTKVSLPTQWTFIDGDYIACEVSISDLKGGHSGSEIHRGRANAIILLGRMLHEISKTIPMEIFEISGGTKMNAIPRSSRAIVAINPSHHKKLKQEISKWHDIFKNELVNIEDDFNVNVTEPIEHNSPFVFSENTKNSTLELLSVMPNGVQSMSFIVEDLVESSLNLGVLTSSDQSITFESSIRSSVTTKKEMLLEKLIILSKKYGATLESSGDYPAWPPQLHSDLKDLFLETYKETFDTEMHAYALHAGVECGIFKEKMPSLDIVSFGPNMYDVHTPRERLSISSTERSYRLLMNILKNSKKLKK
SIO_010081: HMPREF0389_RS02550
subclass of: SO_0000673
so part of: HMPREF0389_RS02550
location: 573539..575005
location: region:573539-575005:1
so has part: feature:573539-575005:1:exon

WP_014262166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:573539-575005:1:exon

HMPREF0389_RS02555
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: truA
locus tag: HMPREF0389_RS02555
old locus tag: HMPREF0389_00125
so part of: sequence
location: complement(575414..576148)
location: region:575414-576148:-1
so has part: feature:575414-576148:-1:exon
subclass of: SO_0000010

position:575414:-1
position: 575414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576148:-1
position: 576148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575414-576148:-1:exon

HMPREF0389_RS02555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: truA
locus tag: HMPREF0389_RS02555
old locus tag: HMPREF0389_00125
EC number: 5.4.99.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011100691.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA pseudouridine(38-40) synthase TruA
translation: MNQNILLKIQYIGTNYCGWQKQNNGKSIQQEIERAICEVTGKQVNLTGSGRTDSGVHALGQVANFVIDTTIPVEKIKYAINYYLPDDIRIIESKAVEDSFHARYSSKKKTYCYRINMNEIESPFEKNRSYFVGKELDLSKMKEQSKFLMGEHDFAAFQSEGSSVKTTVRTIYSLEINCINNIAEIHIIGNGFLYNMVRIIAGTLIEIGKGKDYSIVDILNTKQRENAGPTAPACGLFMEKVEYD
SIO_010081: HMPREF0389_RS02555
subclass of: SO_0000673
so part of: HMPREF0389_RS02555
location: complement(575414..576148)
location: region:575414-576148:-1
so has part: feature:575414-576148:-1:exon

WP_014262167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575414-576148:-1:exon

HMPREF0389_RS02560
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02560
old locus tag: HMPREF0389_00124
so part of: sequence
location: 576447..577481
location: region:576447-577481:1
so has part: feature:576447-577481:1:exon
subclass of: SO_0000010

position:576447:1
position: 576447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577481:1
position: 577481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576447-577481:1:exon

HMPREF0389_RS02560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02560
old locus tag: HMPREF0389_00124
inference: COORDINATES: protein motif:HMM:NF014477.2
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO process: GO:0017013 - protein flavinylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD:protein FMN transferase
translation: MKKSYYILMMATTLLITLLSGCSKEESKPLSQSEFYMDTLCTITIYENKPDILKQSMTMIQDIENRMSNVITASEVSKINEQAGISPVKVSSDTFYVIERALYYSKLSNGKFDVSVAPLVNLWNISTDNPKVPSEKEINEVLPFINYKNIVLDKEQKTVFLTEKTMKIDLGGIAKGYAADAIASYFEKEDISGAIINLGGNILVFGQKQDGSPWKVGIQDPTTKQESPIAAIPIEKTTAIVTSGIYQRFFEKDGKLYHHILNPTTGYPYDNSLISVTVITDNSTDADALATTLFSLGLEEGLSIVNQLPNRVEAVFIDSENNIYLSNGLKNRFEIIDEKFKVIE
SIO_010081: HMPREF0389_RS02560
subclass of: SO_0000673
so part of: HMPREF0389_RS02560
location: 576447..577481
location: region:576447-577481:1
so has part: feature:576447-577481:1:exon

WP_014262168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:576447-577481:1:exon

HMPREF0389_RS02565
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02565
old locus tag: HMPREF0389_00123
so part of: sequence
location: complement(577702..580062)
location: region:577702-580062:-1
so has part: feature:577702-580062:-1:exon
subclass of: SO_0000010

position:577702:-1
position: 577702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580062:-1
position: 580062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577702-580062:-1:exon

HMPREF0389_RS02565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02565
old locus tag: HMPREF0389_00123
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013361359.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endonuclease MutS2
translation: MIEERTLRVLEYYEIIKQLKEQAVSTLGKERVEAIEISSDVEKVQVWQKETTEAQGILLQSSKVPIGAFYPMSEALKRAELGASMDMGQLLHLASSLRAARKLKAFLDNKEESLLLKQYTIQLTEDRELEEEIFSSIISEEEMSDSASGTLRQIRRSMSSMKESIRKKLDSIVTSSGQYLQDGIVTMRQDRFVVPVKLENKHKVPGIVHDTSASGATLFVEPMVIVEMNNKLQTLKNEEHQEIQRILKEFSDRAALIADEIRVNETNLTELDFIFAKGKLSISMKAEAVEYNFVMEIRLKQARHPLIDFKKVVPSDILIGKGYKTLMITGPNTGGKTVTLKTMGLFALMYQSGLHLPCDYGSSMCIFENIFADIGDEQSIEQSLSTFSSHMTHIVSILNSATKNCLVLFDELGAGTDPIEGAALAISILEEIKSRDCICIATTHYSELKHYALTEDGVENASMEFNIDTLSPTYRLMIGLPGKSNAFEISQRLGLQQHVIEMAKSRIHTDKLAMEDMLKEIEEEKKKIEYERRESERIYAEAQLIEEKMQMKLDKINDRKEREIQEGKKLAQEIVKKAKEEIDEQIKEVLNLKQQLDREDLNKELEKARKKIKNTMKGLAYEENILYSKEDKEKSLNQIEKGDRVFVSTFHQEGVVLESDDKKREAFVQLGAMKMNLPYEVLQKPKKSKKDSQYSGAGKILKHKSKNIKTEIDLRGLDLETARIELEKYLDDVVLSGLSQVTIIHGLGTFVLKKGVEEILKHYAPVKSYRSGKYGEGGPGVTIVQF
SIO_010081: HMPREF0389_RS02565
subclass of: SO_0000673
so part of: HMPREF0389_RS02565
location: complement(577702..580062)
location: region:577702-580062:-1
so has part: feature:577702-580062:-1:exon

WP_014262169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:577702-580062:-1:exon

HMPREF0389_RS02570
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02570
old locus tag: HMPREF0389_00122
so part of: sequence
location: complement(580068..582368)
location: region:580068-582368:-1
so has part: feature:580068-582368:-1:exon
subclass of: SO_0000010

position:580068:-1
position: 580068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582368:-1
position: 582368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580068-582368:-1:exon

HMPREF0389_RS02570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02570
old locus tag: HMPREF0389_00122
inference: COORDINATES: protein motif:HMM:NF013316.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: U32 family peptidase
translation: MKKNIEILAPAGTMESLYAAVSNGANAIYLGGKTFGARAYAGNFDEQELKQAIAYAHERNVKIYVTTNILVMDSEVTDFLEYVSFLYQNDVDALIIQDIGMVHLLRNIFPNMPLHSSTQMTVINSLDTLYVKKLGIERVVYARENSVEELKEIQQKTGMESETFVHGALCICYSGNCLFSTMMTNRSGNRGSCSQNCRMKYRLEKNGTCVDSGYLLSAKDLSTLTQVEQLIESGIDSWKIEGRMKRPEYVATVAKHYSDMKEHANQIPLIERDQREDEIRHIFQREYTTGFLLNDENKNIVNPLVPKNKGILIGKVLRNDRERKRLKILLEKDIEVGDGLSTGEKVGRILVGNNIVNSAQSGQEIELDYVGNLKTGDEVYKTYSKKIMEGAKSSYQKEAFSFPVTMLLELKVGKQPVLNIEDEEYHRVSYMDDMVVAEAKNKAVDEEFAYTQLSKLGDTPYKLEKKNFSLKISGNVFVSKSDLNRFRREAIHLLSIERQNRHHRTPFDWKECYRIAKQQFDNVNSGEATENRSYYLSCKCRTKEQLETAKKENISRIYVETVELYDYAKSCFNEEQIYYSIPDVVTEKNLNYVENLISHTGKRFLTNSLGIIEKYREYDIIGDYLLNLSNKYSLNCLNAKQVTPSLEWIFSHQMEDILSFSKKDKVEIPIYLTPMVMIMEYDVTKTNDIYSINDQYELVSQKGERFPIWKDELGKTRIFSNEPKELKQDIKRFYDSGFRHFRIEFLNEGEDQVRNIIRSYKNYLEG
SIO_010081: HMPREF0389_RS02570
subclass of: SO_0000673
so part of: HMPREF0389_RS02570
location: complement(580068..582368)
location: region:580068-582368:-1
so has part: feature:580068-582368:-1:exon

WP_014262170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:580068-582368:-1:exon

HMPREF0389_RS08710
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: zapA
locus tag: HMPREF0389_RS08710
old locus tag: HMPREF0389_00121
so part of: sequence
location: complement(582434..582919)
location: region:582434-582919:-1
so has part: feature:582434-582919:-1:exon
subclass of: SO_0000010

position:582434:-1
position: 582434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582919:-1
position: 582919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582434-582919:-1:exon

HMPREF0389_RS08710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: zapA
locus tag: HMPREF0389_RS08710
old locus tag: HMPREF0389_00121
inference: COORDINATES: protein motif:HMM:NF017016.2
GO process: GO:0051301 - cell division [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein ZapA
translation: MNKVTVKIANQEYTVVGEESKEYLLKIASRVDDEMEDLLLKNPKFNYSACAVLTAINITDELCKQKEELEQLKEKCNSLEEYKSKLESLLDQKENCIQDLNVQLGELQEDNSHVKEIKYEFENEMREKESQLTEAIELSNQFQTRMFQLQVEIEELKKKTK
SIO_010081: HMPREF0389_RS08710
subclass of: SO_0000673
so part of: HMPREF0389_RS08710
location: complement(582434..582919)
location: region:582434-582919:-1
so has part: feature:582434-582919:-1:exon

WP_014262171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:582434-582919:-1:exon

HMPREF0389_RS02580
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02580
old locus tag: HMPREF0389_00120
so part of: sequence
location: complement(583011..583589)
location: region:583011-583589:-1
so has part: feature:583011-583589:-1:exon
subclass of: SO_0000010

position:583011:-1
position: 583011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583589:-1
position: 583589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583011-583589:-1:exon

HMPREF0389_RS02580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02580
old locus tag: HMPREF0389_00120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017413792.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitroreductase family protein
translation: MIEELIKKNRAYRKYYQNKKVSSSDLLRLIDIARISSCGNNMQALKYIVCNTKEKNDVMFKNLRWAAALSDWDGPIEGERPSAYIVIALDTKIRNDAMWDHGIAATNILLLATELGYGGCMFASFDKKKLQEAFHLEDHIVPLMVISLGVPLEKVQLEDMKDGKFQYYRGKDGTHHVPKRRLEEVLIGRYLE
SIO_010081: HMPREF0389_RS02580
subclass of: SO_0000673
so part of: HMPREF0389_RS02580
location: complement(583011..583589)
location: region:583011-583589:-1
so has part: feature:583011-583589:-1:exon

WP_041250765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:583011-583589:-1:exon

HMPREF0389_RS02585
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: proC
locus tag: HMPREF0389_RS02585
old locus tag: HMPREF0389_00119
so part of: sequence
location: complement(583692..584486)
location: region:583692-584486:-1
so has part: feature:583692-584486:-1:exon
subclass of: SO_0000010

position:583692:-1
position: 583692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584486:-1
position: 584486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583692-584486:-1:exon

HMPREF0389_RS02585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: proC
locus tag: HMPREF0389_RS02585
old locus tag: HMPREF0389_00119
EC number: 1.5.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004613707.1
GO function: GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO process: GO:0006561 - proline biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyrroline-5-carboxylate reductase
translation: MKIGFIGFGNMAKAMLSGMISNGVCHKENVMVSGLHKETLEIAKNEFGVSVTFQNKEVVEHSDVIFLAVKPQYYGEVISEIQSYINGNQILISLAPGKTIAWLEELFKKDVKLIRTMPNTPALVGEGMTGVCKNDYLQDKDFQKVLPLFKSFGKVEIVPEALMDVVVGISGSAPAYVFMMIEAMADAAVMAGMKRDVSYRFASQAVLGSAKMVLDTKTHPGELKDMVCSPGGTTIKAVASLEKNGFRNALIEGVTSCIKKSKEM
SIO_010081: HMPREF0389_RS02585
subclass of: SO_0000673
so part of: HMPREF0389_RS02585
location: complement(583692..584486)
location: region:583692-584486:-1
so has part: feature:583692-584486:-1:exon

WP_156775229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:583692-584486:-1:exon

HMPREF0389_RS02590
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02590
old locus tag: HMPREF0389_00118
so part of: sequence
location: 584743..585039
location: region:584743-585039:1
so has part: feature:584743-585039:1:exon
subclass of: SO_0000010

position:584743:1
position: 584743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585039:1
position: 585039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584743-585039:1:exon

HMPREF0389_RS02590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02590
old locus tag: HMPREF0389_00118
inference: COORDINATES: protein motif:HMM:NF012675.2
GO function: GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutaredoxin domain-containing protein
translation: MNTVILYGSMKCPDCPPTIDFLNTNNIPFSFVEILESMENLKIFLTIRDEQDALKPARDGHFVGIPCIFWKKTDQYYLDIELFLEAYFTKDSTSNKIL
SIO_010081: HMPREF0389_RS02590
subclass of: SO_0000673
so part of: HMPREF0389_RS02590
location: 584743..585039
location: region:584743-585039:1
so has part: feature:584743-585039:1:exon

WP_014262174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:584743-585039:1:exon

HMPREF0389_RS02595
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02595
old locus tag: HMPREF0389_00117
so part of: sequence
location: 585063..586148
location: region:585063-586148:1
so has part: feature:585063-586148:1:exon
subclass of: SO_0000010

position:585063:1
position: 585063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586148:1
position: 586148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585063-586148:1:exon

HMPREF0389_RS02595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02595
old locus tag: HMPREF0389_00117
EC number: 2.6.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005541159.1
GO function: GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0000105 - histidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidinol-phosphate transaminase
translation: MKKNKHGANLFELAEKYHFNVKDIRDFSSNINPFGASKKALDYVKEHLENVSIYPDSEYIKLKQAISSYSKADTAHIILGEGATGLISKFIQFVNPKHSMVMIPAYSEYKSELNKIEGNTIFSYSLKKENCFQGDTSELIKKTNEKQADILILCNPNNPTGSIFSQDDISYLMEHTSCYVMIDETYIEFTDKNKYSSAPLTTKYKKLFVVRGTSKFFSTPGIRLGYGLCSDEKVLDFFKSHTDLWNINIIATMMGEKMFTDTDYIAETYQKICTERNYLITELSSFEQLKVYPSYGNFILCEIISDKFDADYLYDKLIPDALAIRNCASFETLDKKFFRICTLLPEDNQKLIHSLKNILAQ
SIO_010081: HMPREF0389_RS02595
subclass of: SO_0000673
so part of: HMPREF0389_RS02595
location: 585063..586148
location: region:585063-586148:1
so has part: feature:585063-586148:1:exon

WP_014262175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:585063-586148:1:exon

HMPREF0389_RS02600
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02600
old locus tag: HMPREF0389_00116
so part of: sequence
location: complement(586495..588123)
location: region:586495-588123:-1
so has part: feature:586495-588123:-1:exon
subclass of: SO_0000010

position:586495:-1
position: 586495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588123:-1
position: 588123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586495-588123:-1:exon

HMPREF0389_RS02600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02600
old locus tag: HMPREF0389_00116
inference: COORDINATES: protein motif:HMM:NF012697.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside kinase
translation: MNIQRKKKLEQLWEIRQYQNTENMPLAAKVNNNLYPLSYEVEEEAEITFLDITDNDGRRIYMTSLTFLFTRAAREILDGAIVIVKHSLQNGIYFDIEYKETLKSTHVRLIEKRMRQLVEENVLIERISYTREEAIKRLQEDKLSSNNSQLLRYKDSCMTHIYRCGWLQDYYYGYMVPSTGYLKVFYLHLYNHGIVLLGPSEKNPNKPTGFIPQPKLFQVYKNASEWGKIMGISNVHEWNCAIQSGEYREIVRVTEAAHEKKICEIADMILNNREKGRIILIAGPSSSGKTSFAHRLELQLKVNGLSPITISMDNYFVDREETPLDEHGEPDFETVDAVDITLFNRQMAEIIAGEEVVLPTFDFVTGKKYFDPTNKIQVEEKQPIILEGIHGLNPKLTNQIPDGNKFRIYVSPLTQMNLDSHNKISTSDLRLIRRMARDTQTRGKTPQAVIEAFDKLKKAEQKYIFPYQENADVMFNSALIYELSVLKKFVYPMLQSIDCNSEVYSETRRLEKFLQFFDEMELEIDIPPTSLVREFIGGSTLV
SIO_010081: HMPREF0389_RS02600
subclass of: SO_0000673
so part of: HMPREF0389_RS02600
location: complement(586495..588123)
location: region:586495-588123:-1
so has part: feature:586495-588123:-1:exon

WP_014262176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586495-588123:-1:exon

HMPREF0389_RS02605
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: lepB
locus tag: HMPREF0389_RS02605
old locus tag: HMPREF0389_00115
so part of: sequence
location: complement(588212..588763)
location: region:588212-588763:-1
so has part: feature:588212-588763:-1:exon
subclass of: SO_0000010

position:588212:-1
position: 588212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588763:-1
position: 588763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588212-588763:-1:exon

HMPREF0389_RS02605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: lepB
locus tag: HMPREF0389_RS02605
old locus tag: HMPREF0389_00115
EC number: 3.4.21.89
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003417931.1
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase I
translation: MSKEIKREIFEWIKVIIIAGVLALIITHFVRPTIVKGESMVPTLYPNDYLIMNRLAYKNKPVEYLDVVVFHSKLSLDGESSKKKKDLVKRVIGLPGDIIEVKDGMVYRNGEELNEPYINDGITDRDIMVVVPQNQYFVMGDNRLNSSDSRDDRVGMISKENIIGKVTLRLFPFSKITTDFLPE
SIO_010081: HMPREF0389_RS02605
subclass of: SO_0000673
so part of: HMPREF0389_RS02605
location: complement(588212..588763)
location: region:588212-588763:-1
so has part: feature:588212-588763:-1:exon

WP_014262177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:588212-588763:-1:exon

HMPREF0389_RS02610
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02610
old locus tag: HMPREF0389_00114
so part of: sequence
location: complement(588814..593037)
location: region:588814-593037:-1
so has part: feature:588814-593037:-1:exon
subclass of: SO_0000010

position:588814:-1
position: 588814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593037:-1
position: 593037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588814-593037:-1:exon

HMPREF0389_RS02610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02610
old locus tag: HMPREF0389_00114
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007287260.1
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PolC-type DNA polymerase III
translation: MEVKSFFGEHHLNVTHIKYLKKSRTVVFFLELMHFLTESEIEKYEQDLSELLQGYVVVLSVRYSNIIKNEEFWTNYQSNVKEYLFRKYPSLNGMKTNVTIEIDSEQKKLYCCVSQTFLHNNLKNNKLDMVLAEKIQRELGIVMEVSFICNCSEYAIEHYQKQQEDYLEQFIQTMETKIAEAPKEQKTMEAVCMYGKNFSGEAVPLKTIRQAVEKIILEGKVFAFDKRQMKNQKYLYLFNITDQTDSISCKLFLKEDNLQLSDGDFVKILGNVTYDTYAQELVVMVSSMMPSKEEKRFDNCERKRVELHAHTSMSSMEGLLSAKELLGAAKEFGHKAIAITDDAVVQAFPDAMGSAKKTGIKVLYGVEGHLVDDMSNILKEFNDKDLNQEFVVFDIETTGFSSINDAIIEIGAVKIKNREIIDRFSEFVNPKREIPYHITELTSITNEMVCNEDTIEEVLPRFMEFSKDSVFVAHNSDFDTSFIKENCKRLDLLYDRIAIDTVELSRALLTDLKRHKLNVVAKKLGISLENHHRAVDDAEATAQIFLKFLTMIEECGVTTLAEVNQKITKTNIDTIRDKSITIFAQNLVGLKNLYKLISFSHIKHFYRIPRILKSELVEHREGLLIGTGGENGEIFGGVREEVERGVDPSVVDEKIKFYDFAEVMPVSTYRSFFSARFDMNETDLRRINQRIYDAATQAGIMTVAVGNVHYLNPEDGIYRHILRYGQKKKDDRIDQALYYRTTQEMLDEFEYLGKEVAYEIVVKNTNDFADLIEEMLPVPEGTFPPEIEGAKEDLREMCYEKAKRIYGNPLPEIVEKRLDRELSSIIGNGYAVMYIIAQKLVTKSLRDGYLVGSRGSVGSSFAATMSDITEVNPLPPHYICENEDCKYSEFMESGAFGSGVDMPNKLCPCCGRELKKDGFDIPFEVFLGFEGDKEPDIDLNFAGEYQPNAHKFVEDLFGEGYVFRAGTIGTVAEKTAYGYVVKYLEENNLVANNAEKQRLQLGCTGIKRTSGQHPGGVMVCPKNKDIYDFTPVQYPANDTKCGVITTHFDYHSISGRILKLDILGHDVPSIIRHLEDMTNVVATEIPLDDERVMSIFTSTDAIDCDLSQIQCETGTLGIPEFGTRFVQHMLMDTNPHTFAELIRISGLSHGTDVWVNNAQDLVRSNTVTLKDVISTRDDIMNYLIQEGLPSKMSFKIMENVRKGKGLTEEQEECMISHQVPNWYITSCKKIKYMFPKAHAVAYVMMSFRIAYFKVYHKEAFYAACFSTKVDNFDVDLICRGKEAVMMAYQELKQKENNLTAKEMGFITVLELAYEMHQRGVKMNHVDIYKSDSKKFYVLDNEILPPLLSIPGLGLTVAEKIKEEAGKSEFISLEDFRIRTKASKTVIETLRNHGCLQGLPETNQLSLF
SIO_010081: HMPREF0389_RS02610
subclass of: SO_0000673
so part of: HMPREF0389_RS02610
location: complement(588814..593037)
location: region:588814-593037:-1
so has part: feature:588814-593037:-1:exon

WP_014262178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:588814-593037:-1:exon

HMPREF0389_RS02615
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
alternative label: gcpE
gene: ispG
locus tag: HMPREF0389_RS02615
old locus tag: HMPREF0389_00113
gene synonym: gcpE
so part of: sequence
location: complement(593166..594212)
location: region:593166-594212:-1
so has part: feature:593166-594212:-1:exon
subclass of: SO_0000010

position:593166:-1
position: 593166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594212:-1
position: 594212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593166-594212:-1:exon

HMPREF0389_RS02615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
alternative label: gcpE
gene: ispG
locus tag: HMPREF0389_RS02615
old locus tag: HMPREF0389_00113
gene synonym: gcpE
EC number: 1.17.7.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003491319.1
GO function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO process: GO:0044237 - cellular metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
translation: MNRKNTRAVNVGGVIVGGNYPIVIQSMTNTPTEDVAQTVNQILELEREGCQIVRLAIPTQEAAIAVKEIKKKVNIPLVADIHFNHILALEVMKNGIDALRINPGNIGGEEKVKAVIKMAKEKKIPIRIGVNGGSLDKKVLSEDRTVVESMIQSALEHISILEKMDFYDIVVSLKASDIFRSIEAYTRFSEISSYPLHLGITESGGVRSGAVKSAIGIGSLLMNGIGDTIRVSLTANPVEEVIIAKDILKSLDLYDKDIKIISCPTCGRTKIDLIPLAERIEKAVKDIHKPITLAIMGCAVNGPGEAREADIGIAGGIGEAILFKKGEVVRKIKEADIEVELLKEIEKM
SIO_010081: HMPREF0389_RS02615
subclass of: SO_0000673
so part of: HMPREF0389_RS02615
location: complement(593166..594212)
location: region:593166-594212:-1
so has part: feature:593166-594212:-1:exon

WP_041250955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:593166-594212:-1:exon

HMPREF0389_RS02620
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02620
old locus tag: HMPREF0389_00112
so part of: sequence
location: complement(594234..595265)
location: region:594234-595265:-1
so has part: feature:594234-595265:-1:exon
subclass of: SO_0000010

position:594234:-1
position: 594234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595265:-1
position: 595265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594234-595265:-1:exon

HMPREF0389_RS02620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02620
old locus tag: HMPREF0389_00112
inference: COORDINATES: protein motif:HMM:NF014244.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M50 family metallopeptidase
translation: MGIFHTIIALLIFGFLVFIHELGHFIVAKKNDVRVYEFAIGMGPSLFKKTYHDTIYSINCIPMGGFVRMSPFEDDGEEVCLPEEDFNNKRPMQKIAVALAGPVMNIIFAVIAFCLFIGIVGYEKNMVDQVLPNYPAYQSGISEGDTIVSVNGVATKEWEDIMKELSKVEKNSVIVIDILTKEQEEKTVEMVPIFKEGRYMIGITPKIEHRLIPSVKRGFAMTLSIGTEMLVFLKQLFTGRADTNDLAGPIGIIQVVSHTAKVGSEYLLYITGIISLNLGILNLLPIPALDGSRILISVIEILRRGKKLSLKWENRINLAGFAFLLGLMILVTYKDIVRIFFKG
SIO_010081: HMPREF0389_RS02620
subclass of: SO_0000673
so part of: HMPREF0389_RS02620
location: complement(594234..595265)
location: region:594234-595265:-1
so has part: feature:594234-595265:-1:exon

WP_014262180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:594234-595265:-1:exon

HMPREF0389_RS02625
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02625
old locus tag: HMPREF0389_00111
so part of: sequence
location: complement(595394..596182)
location: region:595394-596182:-1
so has part: feature:595394-596182:-1:exon
subclass of: SO_0000010

position:595394:-1
position: 595394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596182:-1
position: 596182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595394-596182:-1:exon

HMPREF0389_RS02625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02625
old locus tag: HMPREF0389_00111
EC number: 2.7.7.41
inference: COORDINATES: protein motif:HMM:NF013327.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatidate cytidylyltransferase
translation: MLVRLLSALVLIPFLLFSVHCGGIYLFIFLCGASLIGLYEMTRVFQKKGYRVLEKELYFFTFLTYILLFSKEEIGKNYNMIPFLFLTGAVYMIQKRFSVEELGLNILSYVYIPISLSYVFKVEQFTHSYVWFIFILAYATDTFAYFSGKLFGKHKLIPKISPNKTIEGAIGGIIGAVISCEIYLFYLGETKYVIPIIAVAIVGSILSQLGDLFASSIKRLFDVKDYGKLIPGHGGVLDRIDSVLFTAPFVYYAFVLIELFIK
SIO_010081: HMPREF0389_RS02625
subclass of: SO_0000673
so part of: HMPREF0389_RS02625
location: complement(595394..596182)
location: region:595394-596182:-1
so has part: feature:595394-596182:-1:exon

WP_014262181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:595394-596182:-1:exon

HMPREF0389_RS02630
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02630
old locus tag: HMPREF0389_00110
so part of: sequence
location: complement(596298..597020)
location: region:596298-597020:-1
so has part: feature:596298-597020:-1:exon
subclass of: SO_0000010

position:596298:-1
position: 596298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597020:-1
position: 597020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596298-597020:-1:exon

HMPREF0389_RS02630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02630
old locus tag: HMPREF0389_00110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003424529.1
GO function: GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isoprenyl transferase
translation: MLDQLDREYMPTHVGIIMDGNGRWAKKRMMPRNFGHKQGVETLKKITEECSNLGIKYLTVYAFSTENWKRSGLEISGIMNLLVDYLAKELRNLHEKNVKLMTIGDIEKLPKAAYNKLVESKEFTKDNTGLVLTVALNYGSRRDISHAIKKIILSDRESPIDLDKVDDTFLRDFLDTAFLPDPDLIIRPSGEQRLSNFLMWEAAYTEFWYSDINWPDFKKEDLHRALHDFQNRNRRYGGTK
SIO_010081: HMPREF0389_RS02630
subclass of: SO_0000673
so part of: HMPREF0389_RS02630
location: complement(596298..597020)
location: region:596298-597020:-1
so has part: feature:596298-597020:-1:exon

WP_014262182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:596298-597020:-1:exon

HMPREF0389_RS02635
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02635
old locus tag: HMPREF0389_00109
so part of: sequence
location: complement(597101..597304)
location: region:597101-597304:-1
so has part: feature:597101-597304:-1:exon
subclass of: SO_0000010

position:597101:-1
position: 597101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597304:-1
position: 597304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597101-597304:-1:exon

HMPREF0389_RS02635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02635
old locus tag: HMPREF0389_00109
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLQYRQLIGKSLEEAVVILEEQKIPYDVLRTQGKKDKELLKEPYVVAVRETNKIQIIVSNFLTTIDR
SIO_010081: HMPREF0389_RS02635
subclass of: SO_0000673
so part of: HMPREF0389_RS02635
location: complement(597101..597304)
location: region:597101-597304:-1
so has part: feature:597101-597304:-1:exon

WP_014262183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:597101-597304:-1:exon

HMPREF0389_RS02640
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: frr
locus tag: HMPREF0389_RS02640
old locus tag: HMPREF0389_00108
so part of: sequence
location: complement(597306..597863)
location: region:597306-597863:-1
so has part: feature:597306-597863:-1:exon
subclass of: SO_0000010

position:597306:-1
position: 597306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597863:-1
position: 597863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597306-597863:-1:exon

HMPREF0389_RS02640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: frr
locus tag: HMPREF0389_RS02640
old locus tag: HMPREF0389_00108
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003430598.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome recycling factor
translation: MKLEVHIELEDKMTKTISVLKEELSVIRAGRANPAMLDKISVDYYGSQTPLKQMAGISSPDPRTIVIQPWDKTALKEIEKAILASDLGFNPSNDGEVIRINIPQLTEERRKELVKLVSKTGEQSKVALRNARRDTNDKIKKIEKDGELGEDDAKKALDEVQHIIDKYTKEIDSVVAKKEAEIMEI
SIO_010081: HMPREF0389_RS02640
subclass of: SO_0000673
so part of: HMPREF0389_RS02640
location: complement(597306..597863)
location: region:597306-597863:-1
so has part: feature:597306-597863:-1:exon

WP_014262184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:597306-597863:-1:exon

HMPREF0389_RS02645
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: pyrH
locus tag: HMPREF0389_RS02645
old locus tag: HMPREF0389_00107
so part of: sequence
location: complement(597866..598579)
location: region:597866-598579:-1
so has part: feature:597866-598579:-1:exon
subclass of: SO_0000010

position:597866:-1
position: 597866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598579:-1
position: 598579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597866-598579:-1:exon

HMPREF0389_RS02645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: pyrH
locus tag: HMPREF0389_RS02645
old locus tag: HMPREF0389_00107
EC number: 2.7.4.22
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011592598.1
GO function: GO:0033862 - UMP kinase activity [Evidence IEA]
GO process: GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UMP kinase
translation: MQSAQYKRVLLKLSGEALAGEKGVGIDNTVVSNIAKSVKTLTERGIQVAIVVGGGNIFRGRSGEGMDRTTADHMGMLATVINSLAMRSALENIGVDTRVQTAIEMQAMAEVYIRLRAMRHLEKGRVVIFGAGTGNPYFSTDTAAALRAAEIDAEVILLAKKVDGVYDDDPITNPNAKKFDHLTYIDVLQKNLKVMDSTATSLCMDNNIPIRVFSLEDPENIIRVVDGEKIGTIVEGE
SIO_010081: HMPREF0389_RS02645
subclass of: SO_0000673
so part of: HMPREF0389_RS02645
location: complement(597866..598579)
location: region:597866-598579:-1
so has part: feature:597866-598579:-1:exon

WP_014262185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:597866-598579:-1:exon

HMPREF0389_RS02650
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02650
old locus tag: HMPREF0389_00106
so part of: sequence
location: complement(598709..599503)
location: region:598709-599503:-1
so has part: feature:598709-599503:-1:exon
subclass of: SO_0000010

position:598709:-1
position: 598709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599503:-1
position: 599503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598709-599503:-1:exon

HMPREF0389_RS02650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02650
old locus tag: HMPREF0389_00106
inference: COORDINATES: protein motif:HMM:NF012993.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon-nitrogen family hydrolase
translation: MKVFNIQMNIDQHNPNNNYATAERWIRKAHEEGADVVVLPELWNTAFHMSEKLFELADKDGVRTKQFFSSLSKELHINIVGGSVTVLEDEKIYNRCYVYDREGSQIAEYDKVHLFSFSGEENYFAKGDKVGFFELDGRKCGIIICYDIRFPEWVRLYALSDVEVLFCVSEWPIKRIPHWKALTQTRAIENQLFLVGCNFASLTTKGKFAGESAIFDPWGVNIANHLEEDGLVYGEIDFDKLKEIRTTLNVYQDRRTSLYDISFK
SIO_010081: HMPREF0389_RS02650
subclass of: SO_0000673
so part of: HMPREF0389_RS02650
location: complement(598709..599503)
location: region:598709-599503:-1
so has part: feature:598709-599503:-1:exon

WP_014262186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598709-599503:-1:exon

HMPREF0389_RS02655
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: dcd
locus tag: HMPREF0389_RS02655
old locus tag: HMPREF0389_00105
so part of: sequence
location: complement(599532..600053)
location: region:599532-600053:-1
so has part: feature:599532-600053:-1:exon
subclass of: SO_0000010

position:599532:-1
position: 599532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600053:-1
position: 600053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599532-600053:-1:exon

HMPREF0389_RS02655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: dcd
locus tag: HMPREF0389_RS02655
old locus tag: HMPREF0389_00105
EC number: 3.5.4.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012060750.1
GO function: GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO process: GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dCTP deaminase
translation: MILSGKEIFRRLGEDIVIEPFESSRLNPNSYNLRLHNELLVYEDDILDMKKKNAFKRIIIPEEGLLLEPNKLYLGRTIEFTETKNLVPMLEGRSSVGRLGLSIHITAGFGDVGFKGFWTLEIHSIHPIKIYPNVEICQIYYHTICGEYENYASGKYQGNQDIQPSLLYKDFEK
SIO_010081: HMPREF0389_RS02655
subclass of: SO_0000673
so part of: HMPREF0389_RS02655
location: complement(599532..600053)
location: region:599532-600053:-1
so has part: feature:599532-600053:-1:exon

WP_041250767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:599532-600053:-1:exon

HMPREF0389_RS02660
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: scfB
locus tag: HMPREF0389_RS02660
old locus tag: HMPREF0389_00104
so part of: sequence
location: complement(600462..601850)
location: region:600462-601850:-1
so has part: feature:600462-601850:-1:exon
subclass of: SO_0000010

position:600462:-1
position: 600462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601850:-1
position: 601850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600462-601850:-1:exon

HMPREF0389_RS02660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: scfB
locus tag: HMPREF0389_RS02660
old locus tag: HMPREF0389_00104
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015523844.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0031179 - peptide modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioether cross-link-forming SCIFF peptide maturase
translation: MIHQYKLNGYNIVIDTYSGSVHAVDEVAYDIIELYEKNERETIVDTLLQKYAHLDLSREEIEDCIEDIEYLKEAGQLFSDDIYQNAVLKMKSGSVIKAMCLHVAHTCNLACDYCFAKQGKYHGKDGLMSFEVGKKALDFLIEHSGTRTNLEVDFFGGEPLMNWEVVKQLVAYGRSQEKEKKKKFRFTLTTNGVLLDDEIIEFANKEMYNVVLSLDGRKEIHDRFRKNLAGKGSYDLIVPKFQKFTKSRNDAGYYVRGTYTHHNVDFTEDIFHMSDLGFTQLSMEPVVSSPQDGLLDSSALTEEDLPKLFEQYEILAKEMIKRNREGRGFEFYHYMIDLENGPCVYKRISGCGSGTEYLAVTPWGELYPCHQFVNDPDYCLGNLDDGILKPELVEEFGRCNIYSREECEDCWAKLYCSGGCAANSYHATGSITGVYDYGCKLFKKRIECAIMMKVAEQDEVLE
SIO_010081: HMPREF0389_RS02660
subclass of: SO_0000673
so part of: HMPREF0389_RS02660
location: complement(600462..601850)
location: region:600462-601850:-1
so has part: feature:600462-601850:-1:exon

WP_014262188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:600462-601850:-1:exon

HMPREF0389_RS09130
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: scfA
locus tag: HMPREF0389_RS09130
so part of: sequence
location: complement(601944..602084)
location: region:601944-602084:-1
so has part: feature:601944-602084:-1:exon
subclass of: SO_0000010

position:601944:-1
position: 601944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602084:-1
position: 602084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601944-602084:-1:exon

HMPREF0389_RS09130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: scfA
locus tag: HMPREF0389_RS09130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015514691.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: six-cysteine ranthipeptide SCIFF
translation: MSRIKTLNTRNLRQSMMNGGCGECKTSCQSACKTSCGVANQPCEQH
SIO_010081: HMPREF0389_RS09130
subclass of: SO_0000673
so part of: HMPREF0389_RS09130
location: complement(601944..602084)
location: region:601944-602084:-1
so has part: feature:601944-602084:-1:exon

WP_207635088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:601944-602084:-1:exon

HMPREF0389_RS09135
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: scfA
locus tag: HMPREF0389_RS09135
pseudo: true
so part of: sequence
location: complement(<602091..602225)
location: region:602091-602225:-1
so has part: feature:602091-602225:-1:exon
subclass of: SO_0000010

position:602091:-1
position: 602091
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:602225:-1
position: 602225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602091-602225:-1:exon

HMPREF0389_RS09135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: scfA
locus tag: HMPREF0389_RS09135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007155875.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: six-cysteine ranthipeptide SCIFF
SIO_010081: HMPREF0389_RS09135
subclass of: SO_0000673
so part of: HMPREF0389_RS09135
location: complement(<602091..602225)
location: region:602091-602225:-1
so has part: feature:602091-602225:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:602091-602225:-1:exon

HMPREF0389_RS02670
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02670
old locus tag: HMPREF0389_00102
so part of: sequence
location: complement(602290..603774)
location: region:602290-603774:-1
so has part: feature:602290-603774:-1:exon
subclass of: SO_0000010

position:602290:-1
position: 602290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603774:-1
position: 603774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602290-603774:-1:exon

HMPREF0389_RS02670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02670
old locus tag: HMPREF0389_00102
inference: COORDINATES: protein motif:HMM:NF013444.2
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
translation: MEKYETDEEVHIKMILEKLQFENKNKIPMHMPGHKRNLSLSGEATYLSKLAADCDITEIDGFDDLHDADGILKDSMKRASYLWSCEETHYLVNGSTVGILSGIYGATKPGDTILVARNCHKSVYHAIEVFGLNPIYFLPEIDELTGSCAEVSYETVEKLLFRYPEIKLVLITSPTYEGIVTDIEKIVSVAHQKNIPVMIDEAHGSHLGFGYQFPNNAIQMGADIVVHSLHKTLPSLTQTAAIHRNSNRISKERLQNAISIFETSSPSYLLLASIDGCVELMIREKEKLFLNWRNRLNSFKKRIEKMQNLVLLENEIKKNRQVLYDDSKIVISCKNTNLTGIELMELLRKKYHIELEMASIDYVVAMTGMGDTDVSMEKFAEALLEIDESCEKRNFEQKSFAQFTIPRKFMNIRDIALCNSGFVTLEKLCSENVSAEYIWAYPPGIPLIVPGEHFDDVLISNMIHYQKSGISLKSSTGRFPNEICVVELLKNDRI
SIO_010081: HMPREF0389_RS02670
subclass of: SO_0000673
so part of: HMPREF0389_RS02670
location: complement(602290..603774)
location: region:602290-603774:-1
so has part: feature:602290-603774:-1:exon

WP_156775230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:602290-603774:-1:exon

HMPREF0389_RS02675
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02675
old locus tag: HMPREF0389_00101
so part of: sequence
location: 604016..605458
location: region:604016-605458:1
so has part: feature:604016-605458:1:exon
subclass of: SO_0000010

position:604016:1
position: 604016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605458:1
position: 605458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604016-605458:1:exon

HMPREF0389_RS02675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02675
old locus tag: HMPREF0389_00101
EC number: 6.3.4.21
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007789196.1
GO function: GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0009435 - NAD biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nicotinate phosphoribosyltransferase
translation: MRNLTLLTDLYQLTMMNGYFNENTHEETMIFDVFFRQNPSRGGYTVVCGINEVIDYIENLHFEEEDIAYLRSLNTFDDAFLDYLKNFKFTGEIYAVEEGSVMFPNEPLLRVKAKAVEAQFIETAILCIINFQSLIATKSSRICQVAKDDVVMEFGLRRSQGPDAGIYGAKAAIVGGAQGTSNVLTGKLFNVPVMGTHAHSWIQKFDSEIEAFRSYAKTYPDKTILLIDTYDTLESGLPNAITVFKEMRKAGHEPLGVRIDSGDLEYLSKEVRKRLDEAGFENVKITASNDLDEYTLIDLKLQGAKIDSWGIGTKLITSSDWPSLGGVYKLVAVEKDGVIKPKIKISESPEKITNPGYKKIIRIYNKENNKAEADLIMLNHEIVDTSKPLTIFHPVYTWKRKTYKNYYIKELLQPLFVDGKCVRKKKTVLEYRDYAFSEKNSLWPQYLRLSNPEPYKVDLSEELWNIKNTLINKKRHRRDV
SIO_010081: HMPREF0389_RS02675
subclass of: SO_0000673
so part of: HMPREF0389_RS02675
location: 604016..605458
location: region:604016-605458:1
so has part: feature:604016-605458:1:exon

WP_014262191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:604016-605458:1:exon

HMPREF0389_RS02680
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: murI
locus tag: HMPREF0389_RS02680
old locus tag: HMPREF0389_00100
so part of: sequence
location: 605960..606733
location: region:605960-606733:1
so has part: feature:605960-606733:1:exon
subclass of: SO_0000010

position:605960:1
position: 605960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606733:1
position: 606733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605960-606733:1:exon

HMPREF0389_RS02680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: murI
locus tag: HMPREF0389_RS02680
old locus tag: HMPREF0389_00100
EC number: 5.1.1.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008375126.1
GO function: GO:0008881 - glutamate racemase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate racemase
translation: MNIGIFDSGIGGLSVLHHALKIIPHANFIYYADRKNVPYGEKSVFEIQTFIDEIMNFFISKKVDALVIACNTASSVATKEYRDKFPFPIIGMEPAVKKAVETYTEKQQRILVAATPITIQGNKLRQLLNRVDKYHQADLIALPKLVHFAELKQFDSLEVEEYIKTALNQYCAVDYSAIVLGCTHFNYFKPSFQRIFSKKTQFIDGNEGTIKQLLRKAPLIESYSQSVQFYFSGIPATTKELNEIKTYLSRLEEVYYL
SIO_010081: HMPREF0389_RS02680
subclass of: SO_0000673
so part of: HMPREF0389_RS02680
location: 605960..606733
location: region:605960-606733:1
so has part: feature:605960-606733:1:exon

WP_014262192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:605960-606733:1:exon

HMPREF0389_RS02685
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02685
old locus tag: HMPREF0389_00099
so part of: sequence
location: 606765..608069
location: region:606765-608069:1
so has part: feature:606765-608069:1:exon
subclass of: SO_0000010

position:606765:1
position: 606765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608069:1
position: 608069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606765-608069:1:exon

HMPREF0389_RS02685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02685
old locus tag: HMPREF0389_00099
EC number: 6.3.2.-
inference: COORDINATES: protein motif:HMM:TIGR01499.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008841 - dihydrofolate synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004326 - tetrahydrofolylpolyglutamate synthase activity [Evidence IEA]
GO process: GO:0006730 - one-carbon metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: folylpolyglutamate synthase/dihydrofolate synthase family protein
translation: MTYQETIAHFEQLGKLGIQLGLVRIERLLNHMGNPHHKLKFIHVAGTNGKGSTCYMLSNILSHSGYKTGLFTSPYILDFRESIQVNMKMISEEHFLECAEYVYHCAEQSTINNDPPTQFEILTAIALEFFVRQKCDIVLLEVGLGGTLDSTNIIPPPLLQIITSISLDHTNILGSTIEEITKEKSGIIKSATTIVYPKLPKEVLQILKKKCKLVNSKLVQPDCTSLQFNTNSFGVCDFSYEGISYKKSLLGEVQLYNAIVVITASKELNQLGFSLPSESICYGVEHTFIPARMEILSESPLVLLDGSHNEDGAIALKKTLATFPKTSIKMIMGVLKDKNIYKILENTATLSDIFIAVSPNHPRALSSKKLAEVSKQYCNNVKQASSLEEAVNSAFLNLKESDILVICGSLYLSHDIRPILIRKIKSLSMTKHKN
SIO_010081: HMPREF0389_RS02685
subclass of: SO_0000673
so part of: HMPREF0389_RS02685
location: 606765..608069
location: region:606765-608069:1
so has part: feature:606765-608069:1:exon

WP_014262193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:606765-608069:1:exon

HMPREF0389_RS02690
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: ung
locus tag: HMPREF0389_RS02690
old locus tag: HMPREF0389_00098
so part of: sequence
location: complement(608190..608864)
location: region:608190-608864:-1
so has part: feature:608190-608864:-1:exon
subclass of: SO_0000010

position:608190:-1
position: 608190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608864:-1
position: 608864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608190-608864:-1:exon

HMPREF0389_RS02690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: ung
locus tag: HMPREF0389_RS02690
old locus tag: HMPREF0389_00098
EC number: 3.2.2.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003416528.1
GO function: GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO process: GO:0006284 - base-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-DNA glycosylase
translation: MVNFGNKWDSLLKEEFQEEYYQKLRTFLITEYRTKTIYPDMYHIFEAMKATDYDDVKVVILGQDPYHEPNQAHGMAFSVQPGVRIPPSLFNIYKELSSQLGLTIPNHGYLMKWAKQGVLLLNAVLTVERGKANSHKNMGWEQFTDRVIQLVNAKEKPVVFLLWGSNAIAKAKMIDTKKHLVLTSPHPSPLSAYRGFFGNGHFLTTNEFLKQKYSQVIDWQIDDI
SIO_010081: HMPREF0389_RS02690
subclass of: SO_0000673
so part of: HMPREF0389_RS02690
location: complement(608190..608864)
location: region:608190-608864:-1
so has part: feature:608190-608864:-1:exon

WP_014262194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:608190-608864:-1:exon

HMPREF0389_RS02695
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02695
old locus tag: HMPREF0389_00097
so part of: sequence
location: complement(608885..610504)
location: region:608885-610504:-1
so has part: feature:608885-610504:-1:exon
subclass of: SO_0000010

position:608885:-1
position: 608885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610504:-1
position: 610504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608885-610504:-1:exon

HMPREF0389_RS02695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02695
old locus tag: HMPREF0389_00097
EC number: 3.6.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007286332.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MKKFTEFNISKEIQMALEQLGFEEATIIQELAIPIATEGKDLIGQSQTGTGKTFAFGIPILDNILQNNNHQIQALVICPTRELAVQVSNEFDKLTAFTKIRNIAVYGGEYIDKQIKGLKKKVQIVIGTPGRILDHIERKTIKLDHVRFVVLDEADEMLDMGFIEDIENILRETSEERQTMLFSATMPAEILSLSKKYLKNPEMIRVKNKTMTVDQIEQIYMKVKNADKSEVLSRILQLESSKKAIIFCNTKKMVDELVVDMQNRGYAVEALHGDLKQQKRDMVLNRFREGQISMLIATDVAARGLDIRDVDLVINYDLPIEEEQYVHRIGRTGRAGASGKSYSFAYGRDIERLRRIEKYAKCKIKEESIPRYDKVKEKIIHQYIEGIRSQKNSGDLDFYFNLVSEMKQSGVNLEAFLAIMMKNTLNLQNKEKIDYRAYERDRIRAITGQKKEKKSKKYSKERGMVRFELNIGRVDRVGPADIVSSVANRCKIPGKNIGAIDILSDVSYFDIKEEYAKIAEKHLKQVKIRGKKVTAKQMK
SIO_010081: HMPREF0389_RS02695
subclass of: SO_0000673
so part of: HMPREF0389_RS02695
location: complement(608885..610504)
location: region:608885-610504:-1
so has part: feature:608885-610504:-1:exon

WP_014262195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:608885-610504:-1:exon

HMPREF0389_RS08820
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rnpB
locus tag: HMPREF0389_RS08820
so part of: sequence
location: complement(610922..611260)
location: region:610922-611260:-1
so has part: feature:610922-611260:-1:exon
subclass of: SO_0000011

position:610922:-1
position: 610922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611260:-1
position: 611260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610922-611260:-1:exon

HMPREF0389_RS08820
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 546269
nc RNA class: RNase_P_RNA
gene: rnpB
locus tag: HMPREF0389_RS08820
product: RNase P RNA component class A
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00010
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: HMPREF0389_RS08820
subclass of: SO_0000673
so part of: HMPREF0389_RS08820
location: complement(610922..611260)
location: region:610922-611260:-1
so has part: feature:610922-611260:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:610922-611260:-1:exon

HMPREF0389_RS02700
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02700
old locus tag: HMPREF0389_00096
so part of: sequence
location: complement(611337..611693)
location: region:611337-611693:-1
so has part: feature:611337-611693:-1:exon
subclass of: SO_0000010

position:611337:-1
position: 611337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611693:-1
position: 611693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611337-611693:-1:exon

HMPREF0389_RS02700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02700
old locus tag: HMPREF0389_00096
inference: COORDINATES: protein motif:HMM:NF013630.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysM peptidoglycan-binding domain-containing protein
translation: MNRYPTALKEKKNLTEDKKKQIRKKRRTRNFKLVLMTCVWILFSASIVFSMNNDFLPKQSEKTLTFMVTEGDSLWSIGKQYCPEYMDIRKYIHEIMKLNDMQDTTLYVNETIIIPIKE
SIO_010081: HMPREF0389_RS02700
subclass of: SO_0000673
so part of: HMPREF0389_RS02700
location: complement(611337..611693)
location: region:611337-611693:-1
so has part: feature:611337-611693:-1:exon

WP_014262196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:611337-611693:-1:exon

HMPREF0389_RS02705
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: lexA
locus tag: HMPREF0389_RS02705
old locus tag: HMPREF0389_00095
so part of: sequence
location: 611851..612474
location: region:611851-612474:1
so has part: feature:611851-612474:1:exon
subclass of: SO_0000010

position:611851:1
position: 611851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612474:1
position: 612474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611851-612474:1:exon

HMPREF0389_RS02705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: lexA
locus tag: HMPREF0389_RS02705
old locus tag: HMPREF0389_00095
EC number: 3.4.21.88
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012159404.1
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional repressor LexA
translation: MFSDLNEKEKSTLQYIANTVNEKGYPPSVREICKSVGFKSTSTAYACLNQLKDKGYIRKDSVKTRALEVIDPIERMGFAKKNTVDIPIIGKVTAGTPILAVENVDDYIPISEHWINSKEHFLLRVEGDSMINAGIYNNDIVLIEQCQTASNGDIVVALIDGEYTTIKRFFYEKNRICLKPENEKYSPIFSDNIKILGKLKMLIRKFD
SIO_010081: HMPREF0389_RS02705
subclass of: SO_0000673
so part of: HMPREF0389_RS02705
location: 611851..612474
location: region:611851-612474:1
so has part: feature:611851-612474:1:exon

WP_014262197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:611851-612474:1:exon

HMPREF0389_RS02710
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02710
old locus tag: HMPREF0389_00094
so part of: sequence
location: complement(612638..614011)
location: region:612638-614011:-1
so has part: feature:612638-614011:-1:exon
subclass of: SO_0000010

position:612638:-1
position: 612638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614011:-1
position: 614011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612638-614011:-1:exon

HMPREF0389_RS02710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02710
old locus tag: HMPREF0389_00094
inference: COORDINATES: protein motif:HMM:NF013703.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MATE family efflux transporter
translation: MKSFGLFNQTLEERRDMILNGKLMNTLLFLSVPTLVMCLIQSLIPIIDSLFLNRTSGYVVAASVGFVVPIINILNGMSMGLGVSGMAMIGSANGSGNKELVRKIATQLMVVGFLAGIVMAPFCFVSGLIATRFINSEIAGDVFIYLGLYSFVMPFLFLTAIFNSIKNGIGQPEATLYRMIFLLVGKVVFNTIYLYVLHLGTIGSVLGSLSSYFCISVWMYYDLFIKDSDLKLSLKDFHFDKEIIEETFRLGVPAMINHMTVNVGFVLINMEVQKYGGNIMNAQTIAINLSTICFLIPSSLSTTVTTMVSMNIGVGRSERAKNTFYRASIVAIIISFIIIVVFFPFAKPLVLLFHTSESMLGITIDAVKIYTVAIIGFSLYMIAQGAFIGLGKTKIPVFTGVLRIWLLRYLFILAFENSMGVYSVFWGNVFSNTVAGLICFVIALKVPWESSVKLVHS
SIO_010081: HMPREF0389_RS02710
subclass of: SO_0000673
so part of: HMPREF0389_RS02710
location: complement(612638..614011)
location: region:612638-614011:-1
so has part: feature:612638-614011:-1:exon

WP_014262198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:612638-614011:-1:exon

HMPREF0389_RS02715
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: dnaJ
locus tag: HMPREF0389_RS02715
old locus tag: HMPREF0389_00093
so part of: sequence
location: complement(614177..615307)
location: region:614177-615307:-1
so has part: feature:614177-615307:-1:exon
subclass of: SO_0000010

position:614177:-1
position: 614177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615307:-1
position: 615307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614177-615307:-1:exon

HMPREF0389_RS02715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: dnaJ
locus tag: HMPREF0389_RS02715
old locus tag: HMPREF0389_00093
EC number: 1.8.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013121286.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone DnaJ
translation: MEKRDYYEVLGISRSATEQEIKKAYRKKAMEYHPDRNPDNKEAEEKFKEVNEAYEVLSDAEKRKTYDQFGHAGFDPRSGFSGGFEGADFSDLGDIFGSMFGDMFGGGMRQRRNGPKRGADLRYAVNVTFEEAAFGTDKEVTIRREEECDVCHGTGAKPGTHSKTCPTCHGSGQVSQQVKTPFGVMMQTVTCSSCHGEGEIIEERCSKCGGRKTIPGKKTVSVKVPAGIEDGTMLRMSGQGQPGEKGGPRGDLLVQIRVQPHSVFERDGNTVWMELPISFTQAALGDEIEVPTLDGKVKYKIPEGTQTGTIFRLKGKGIPYMRHGGRGDQKVRVKVEVPRKLTEKQKELLRAYAQECGDYVTEESKGFWGKIKDALD
SIO_010081: HMPREF0389_RS02715
subclass of: SO_0000673
so part of: HMPREF0389_RS02715
location: complement(614177..615307)
location: region:614177-615307:-1
so has part: feature:614177-615307:-1:exon

WP_014262199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:614177-615307:-1:exon

HMPREF0389_RS02720
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: dnaK
locus tag: HMPREF0389_RS02720
old locus tag: HMPREF0389_00092
so part of: sequence
location: complement(615390..617225)
location: region:615390-617225:-1
so has part: feature:615390-617225:-1:exon
subclass of: SO_0000010

position:615390:-1
position: 615390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617225:-1
position: 617225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615390-617225:-1:exon

HMPREF0389_RS02720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: dnaK
locus tag: HMPREF0389_RS02720
old locus tag: HMPREF0389_00092
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009525623.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone DnaK
translation: MGKTIGIDLGTTNSCVAVLEGGEPVVIANREGLRTTPSVVAFSKEGERIVGEPAKRQAVTNPDRTISSIKREMGTSFKVTIDGKDYTPQDISAIILQKLKSDAESYLGETVTSAVITVPAYFTDAQRQATKDAGKIAGLDVKRIINEPTAASIAYGFEKDNIEEKILVFDLGGGTFDVSVLEIADGTFEVLATSGNNHLGGDDFDNVLVDYMAKEFLSQEGVDLKADKMSLQRLKDAAEKAKKELSSTLSTNINLPFITATATGPKHFNMDLSRAKFEELTKHLVNQTIEPTKKAMEDAKLSPSDINKVILVGGSTRIPAVQEEIKKFLGKEPHKGINPDECVALGAAVQGGVLTGEVNDILLLDVTPLSLGIETLGGVFTKIIERNTTIPAKKSQVFSTAADNQPAVDIHVLQGERSMVADNITLGRFQLSDIPPAPRGVPQIEVTFDIDANGIVNVRAKDLGTGKEQNITITSSSNLSSEEIEKKVKEAEMHAEEDKKKKEKMEALNQAESTIYQTEKTLNEVGDKVSEQEKTEVKNALEELKKVKDNENSTSEEIRKAIDEVMNKFHTISQKMYEEAQKAEAQQDVPQQEQPQDDNVVDADYEEVDKK
SIO_010081: HMPREF0389_RS02720
subclass of: SO_0000673
so part of: HMPREF0389_RS02720
location: complement(615390..617225)
location: region:615390-617225:-1
so has part: feature:615390-617225:-1:exon

WP_014262200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:615390-617225:-1:exon

HMPREF0389_RS02725
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: grpE
locus tag: HMPREF0389_RS02725
old locus tag: HMPREF0389_00091
so part of: sequence
location: complement(617264..617845)
location: region:617264-617845:-1
so has part: feature:617264-617845:-1:exon
subclass of: SO_0000010

position:617264:-1
position: 617264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617845:-1
position: 617845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617264-617845:-1:exon

HMPREF0389_RS02725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: grpE
locus tag: HMPREF0389_RS02725
old locus tag: HMPREF0389_00091
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009531160.1
GO function: GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotide exchange factor GrpE
translation: MSKDEKEMILEKQEELKEKAEDVEGKVEEGVSPEIETPEGVDNSFMQRLEEKKKEEELHLQELTDSVKRIQAEFINYKRRTEQEKEMLSSLANERIILDLLPVLDNFQRGLDAIEEKEGSLYEGMELIYKQLLSTLKKNGVQEIDTTIDFDPNFHHAVMQEDGEESGKILEVFQKGYLLKEKVIRPAMVKVSN
SIO_010081: HMPREF0389_RS02725
subclass of: SO_0000673
so part of: HMPREF0389_RS02725
location: complement(617264..617845)
location: region:617264-617845:-1
so has part: feature:617264-617845:-1:exon

WP_014262201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:617264-617845:-1:exon

HMPREF0389_RS02730
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: hrcA
locus tag: HMPREF0389_RS02730
old locus tag: HMPREF0389_00090
so part of: sequence
location: complement(617889..618932)
location: region:617889-618932:-1
so has part: feature:617889-618932:-1:exon
subclass of: SO_0000010

position:617889:-1
position: 617889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618932:-1
position: 618932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617889-618932:-1:exon

HMPREF0389_RS02730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: hrcA
locus tag: HMPREF0389_RS02730
old locus tag: HMPREF0389_00090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013362007.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO process: GO:0009408 - response to heat [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heat-inducible transcriptional repressor HrcA
translation: MKNNLTDRKLRILEFIIQEYIHTAEPIGSRTISKNQGLNVSAATIRNEMSDLEELGLLVQPHTSAGRIPSEKAYEIYVKNMMGSNFLKEYDKQMIQSKLGKNIDKISTLLQESLDLISELTNYTSIGILETQNRKRVLKNISLVPIDSRRIVIVTVLDDGEVRNDTMILHQIIDTESLRLISDAINESLVGKCYEDISESLFPYIKSKISEYTVALDDIFSFLEEKIHHPNDSFQLVFHGMTNIFNHPEFNDISRARSFFTMMKEEDLLKKVLDIRGIEKDNINIVIGDDRMDSVMRDCSIITANYIKDGVPIGKVGIIGPKRMDYQRAYSVMSYLQKQINRLLNDS
SIO_010081: HMPREF0389_RS02730
subclass of: SO_0000673
so part of: HMPREF0389_RS02730
location: complement(617889..618932)
location: region:617889-618932:-1
so has part: feature:617889-618932:-1:exon

WP_014262202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:617889-618932:-1:exon

HMPREF0389_RS02735
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02735
old locus tag: HMPREF0389_01688
so part of: sequence
location: complement(619163..619531)
location: region:619163-619531:-1
so has part: feature:619163-619531:-1:exon
subclass of: SO_0000010

position:619163:-1
position: 619163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619531:-1
position: 619531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619163-619531:-1:exon

HMPREF0389_RS02735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02735
old locus tag: HMPREF0389_01688
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010248267.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-sensitive transcriptional regulator
translation: MKKGIGNKIKENTDNSMTCENFEEECMTCDTISKEDSLENKNLIHRLHRIEGQIRGIQKMIQEDRDCVDIITQVSASLSALENVSLIILEKHIKGYLQNMKTNPEEEESIDILVEVIKRILK
SIO_010081: HMPREF0389_RS02735
subclass of: SO_0000673
so part of: HMPREF0389_RS02735
location: complement(619163..619531)
location: region:619163-619531:-1
so has part: feature:619163-619531:-1:exon

WP_242821722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:619163-619531:-1:exon

HMPREF0389_RS02740
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02740
old locus tag: HMPREF0389_01689
so part of: sequence
location: complement(619528..621732)
location: region:619528-621732:-1
so has part: feature:619528-621732:-1:exon
subclass of: SO_0000010

position:619528:-1
position: 619528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621732:-1
position: 621732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619528-621732:-1:exon

HMPREF0389_RS02740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02740
old locus tag: HMPREF0389_01689
EC number: 7.2.2.-
inference: COORDINATES: protein motif:HMM:TIGR01511.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MKEQKIEYDIIGMHCAACSARIENRLSKEEGIIDVAVNLALETGSVSYDSERISPDRIVDIVDKMGFQLIVKQEDTVSIDGLREEEYAKQKRLFLCSLILTLPLFWTMVTHFSFSSSWWIPKILLNPKIQWVLATPVQFFVGWQFYKGAYASLKSRNANMDVLVSLGTSAAYFYSVYLTILNWNSSSHIHLYFETSAMLITLILLGKLLEQNAKGKTSSAIKKLIGLQSKTAVVERDGKEETIPISDVVVGDILHVKPGEKIPVDAIVIYGNSAVDESMINGEPIPNDKEVGDFVIGSTVNKSGFLKIKAKKIGKDTMLSQIIETVKKAQSSKAPIQRIADKIAGIFVPVVMTIAAITFVAWYVWIDQGNFSRALENMISVLVIACPCSLGLATPTAIMAGSGRAAEYGVLFKGGEYLENAYRTNTIVLDKTGTITEGKPALSTVVIKNISEESFYQYVYSLEKCSEHPLAQAVVEGFEKSKKLDVIPLDDFENLSGYGVGGHVFGNEIWVGNRKLMLSKKIHFEEEDEILQLEETGKTLVFVAINGELSGYMAISDTLKESSKSSIEQLKKLGIDVIMMTGDHITAAREVASKVGIDTVIADVLPEEKADEIGKLQKQGKIVSMVGDGINDSPALATADVSMAIGTGTDIAMETADITLMRGDLESVYDALLLSKHTMRIIKQNLFWALCYNSIGIPLAASGCLLPWIAGAAMACSSVSVVTNSLRLQRIKLS
SIO_010081: HMPREF0389_RS02740
subclass of: SO_0000673
so part of: HMPREF0389_RS02740
location: complement(619528..621732)
location: region:619528-621732:-1
so has part: feature:619528-621732:-1:exon

WP_014262204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:619528-621732:-1:exon

HMPREF0389_RS09170
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS09170
old locus tag: HMPREF0389_01690
so part of: sequence
location: complement(621745..621954)
location: region:621745-621954:-1
so has part: feature:621745-621954:-1:exon
subclass of: SO_0000010

position:621745:-1
position: 621745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621954:-1
position: 621954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621745-621954:-1:exon

HMPREF0389_RS09170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS09170
old locus tag: HMPREF0389_01690
inference: COORDINATES: protein motif:HMM:NF012621.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation transporter
translation: MKKVINVVGMSCGHCVKAVHDALSNKVGVSSVEVDLEKNIAEVDFDETKVTLKELKNEIEELGFGVTDK
SIO_010081: HMPREF0389_RS09170
subclass of: SO_0000673
so part of: HMPREF0389_RS09170
location: complement(621745..621954)
location: region:621745-621954:-1
so has part: feature:621745-621954:-1:exon

WP_014262205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:621745-621954:-1:exon

HMPREF0389_RS02750
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: gltS
locus tag: HMPREF0389_RS02750
old locus tag: HMPREF0389_00087
so part of: sequence
location: complement(622178..623398)
location: region:622178-623398:-1
so has part: feature:622178-623398:-1:exon
subclass of: SO_0000010

position:622178:-1
position: 622178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623398:-1
position: 623398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622178-623398:-1:exon

HMPREF0389_RS02750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: gltS
locus tag: HMPREF0389_RS02750
old locus tag: HMPREF0389_00087
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012062035.1
GO function: GO:0015501 - glutamate:sodium symporter activity [Evidence IEA]
GO process: GO:0015813 - L-glutamate transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium/glutamate symporter
translation: MVIEMNMVKTLMVSILMLLLGKFLRKKISFLVKYSIPEAVVGGLLFAVFTLIMKQTGIAEFTFDKTLESYFMNVFFTASGFEAGAALLKKSGKKVLIFVGLAAATAFLQNVIAVGLSPLVGLNAQLGFMTGSIPMTGGHGNAAAYAPIVEKAGVEGAVAIAIAAATFGLVAGSLIGGPVGNFLIKKYDLYSDTPAEVSDDLNALALETTSRPKELNPNTFMLANILIFIALGLGAYIMDLFKILLPNVTLPIHVMGMLGGAIIRNAYDAITGDTNATPLEEIDMIGNVSLSIFVSMAIMTMQLWTLIDLAGPLLILLLAQCVFIILFAFITFKMMGADYDAAIMVSGHIGFSMGAVPVSVANMKAICDRYRFSKIAFFIVPVVGGLFSNFTNAAIITGFMNFLGIH
SIO_010081: HMPREF0389_RS02750
subclass of: SO_0000673
so part of: HMPREF0389_RS02750
location: complement(622178..623398)
location: region:622178-623398:-1
so has part: feature:622178-623398:-1:exon

WP_014262206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:622178-623398:-1:exon

HMPREF0389_RS02755
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: tnpA
locus tag: HMPREF0389_RS02755
old locus tag: HMPREF0389_01691
so part of: sequence
location: complement(623881..624351)
location: region:623881-624351:-1
so has part: feature:623881-624351:-1:exon
subclass of: SO_0000010

position:623881:-1
position: 623881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624351:-1
position: 624351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623881-624351:-1:exon

HMPREF0389_RS02755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: tnpA
locus tag: HMPREF0389_RS02755
old locus tag: HMPREF0389_01691
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004844952.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MSQQNNVNNSLAHTKWNCKYHVVFAPKYRRKVFYGEKKEAIRDIIRTLCQWKGVEIIEGEVCPDHIHLLLSIPPKISVSSFMGYLKGKSSLMIFQKYGNMKFAYRNREFWCKGYYVDTVGKNTKAIQEYISNQLKVDRESDQLSIFDPRDPFTGSK
SIO_010081: HMPREF0389_RS02755
subclass of: SO_0000673
so part of: HMPREF0389_RS02755
location: complement(623881..624351)
location: region:623881-624351:-1
so has part: feature:623881-624351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:623881-624351:-1:exon

HMPREF0389_RS02760
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rpsI
locus tag: HMPREF0389_RS02760
old locus tag: HMPREF0389_00084
so part of: sequence
location: complement(624557..624949)
location: region:624557-624949:-1
so has part: feature:624557-624949:-1:exon
subclass of: SO_0000010

position:624557:-1
position: 624557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624949:-1
position: 624949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624557-624949:-1:exon

HMPREF0389_RS02760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rpsI
locus tag: HMPREF0389_RS02760
old locus tag: HMPREF0389_00084
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003515879.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S9
translation: MAKVQYFGTGRRKSSVARVRLMPGEGNVLINGRTLDSYFGYETLKREVLRPLVITDTQGKYDVIVKVEGGGFTGQAGAIRHGISRALLEVDAELRPILKKAGFLTRDPRMKERKKYGLKAARRAPQFSKR
SIO_010081: HMPREF0389_RS02760
subclass of: SO_0000673
so part of: HMPREF0389_RS02760
location: complement(624557..624949)
location: region:624557-624949:-1
so has part: feature:624557-624949:-1:exon

WP_014262207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:624557-624949:-1:exon

HMPREF0389_RS02765
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: rplM
locus tag: HMPREF0389_RS02765
old locus tag: HMPREF0389_00083
so part of: sequence
location: complement(624965..625393)
location: region:624965-625393:-1
so has part: feature:624965-625393:-1:exon
subclass of: SO_0000010

position:624965:-1
position: 624965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625393:-1
position: 625393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624965-625393:-1:exon

HMPREF0389_RS02765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
gene: rplM
locus tag: HMPREF0389_RS02765
old locus tag: HMPREF0389_00083
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005366255.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L13
translation: MKSYISKASDVTRDWYLVDAEGKTLGRLCTEIATVLRGKHKPTFTPHIDGGDYVVVINAEKVVLTGKKTSQKVYRHHSGYFGGLKEVSFKDMLQKNPEEIVRHAVYGMLSKNRLRDPMMKRLKIYVGSEHKHEAQQLKQLDI
SIO_010081: HMPREF0389_RS02765
subclass of: SO_0000673
so part of: HMPREF0389_RS02765
location: complement(624965..625393)
location: region:624965-625393:-1
so has part: feature:624965-625393:-1:exon

WP_014262208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:624965-625393:-1:exon

HMPREF0389_RS02770
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
locus tag: HMPREF0389_RS02770
old locus tag: HMPREF0389_00082
so part of: sequence
location: complement(625562..625897)
location: region:625562-625897:-1
so has part: feature:625562-625897:-1:exon
subclass of: SO_0000010

position:625562:-1
position: 625562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625897:-1
position: 625897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625562-625897:-1:exon

HMPREF0389_RS02770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546269
locus tag: HMPREF0389_RS02770
old locus tag: HMPREF0389_00082
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005366508.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine triad nucleotide-binding protein
translation: MSCLFCSIVSGEIPSTKVYEDEWVYAFKDIDPQAPVHIVLIPKEHCANFMELKDMKILSYLGEAVQKICVQEGIDKNGFRVVTNCGEQGGQTVDHLHFHILGGRNLMWPPG
SIO_010081: HMPREF0389_RS02770
subclass of: SO_0000673
so part of: HMPREF0389_RS02770
location: complement(625562..625897)
location: region:625562-625897:-1
so has part: feature:625562-625897:-1:exon

WP_014262209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:625562-625897:-1:exon

HMPREF0389_RS02775
type: Gene
subclass of: SO_0000704
RO_0002162: 546269
gene: mtaB
locus tag: HMPREF0389_RS02775
old locus tag: HMPREF0389_00081
so part of: sequence
location: complement(625931..627205)
location: region:625931-627205:-1
so has part: feature:625931-627205:-1:exon
subclass of: SO_0000010