Dietzia lutea strain YIM 80766 plasmid unnamed2, complete sequence.
type: Entry
definition: Dietzia lutea strain YIM 80766 plasmid unnamed2, complete sequence.
sequence version: NZ_CP015451.1
sequence date: 2023-04-23
sequence: sequence
division: CON
label: NZ_CP015451.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN04880518
keyword: RefSeq
source: Dietzia lutea
organism: Dietzia lutea
taxonomy: Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Dietziaceae; Dietzia.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP015451.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP Assembley 3 in SMRT analysis v. 2.3\nGenome Coverage :: 169.35x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/23/2023 04:02:48\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,685\nCDSs (total) :: 3,620\nGenes (coding) :: 3,531\nCDSs (with protein) :: 3,531\nGenes (RNA) :: 65\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 3\nPseudo Genes (total) :: 89\nCDSs (without protein) :: 89\nPseudo Genes (ambiguous residues) :: 0 of 89\nPseudo Genes (frameshifted) :: 40 of 89\nPseudo Genes (incomplete) :: 58 of 89\nPseudo Genes (internal stop) :: 7 of 89\nPseudo Genes (multiple problems) :: 13 of 89\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 38048
topology: circular
so has quality: SO_0000988
location: 1..38048
location: region:1-38048:1
RO_0002162: 546160

NZ_CP015451
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN04880518
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Dietzia lutea YIM 80766T, a strain isolated from desert soil in Egypt
author: Zhao, J.
author: Hu, B.
author: Geng, S.
author: Nie, Y.
author: Tang, Y.
journal: Unpublished

2
title: Direct Submission
author: Zhao, J.
author: Hu, B.
author: Geng, S.
author: Nie, Y.
author: Tang, Y.
journal: Submitted (27-APR-2016) College of Engineering, Peking University, No.5 Yiheyuan Road, Haidian District, Beijing, Beijing 100871, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38048:1
position: 38048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-38048:1:source
so part of: sequence
organism: Dietzia lutea
mol type: genomic DNA
strain: YIM 80766
isolation source: soil
culture collection: YIM:80766
type material: type strain of Dietzia lutea
plasmid: unnamed2
country: Egypt
lat lon: 27.06 N 30.11 E
collection date: 2008

546160
type: Taxonomy
SIO_000068: taxonomy

A6035_RS17690
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17690
old locus tag: A6035_17410
so part of: sequence
location: complement(join(37587..38048,1..366))
location: region:1-38048:-1
so has part: feature:1-366:-1:exon
so has part: feature:37587-38048:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38048:-1
position: 38048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-366:-1:exon

position:366:-1
position: 366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37587-38048:-1:exon

position:37587:-1
position: 37587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

A6035_RS17690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17690
old locus tag: A6035_17410
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: TM0106 family RecB-like putative nuclease
translation: MSLVVGGGQVGPLRARGMRTVADLAEAGPDRPADWNGEPYSDAVLRARAHRDGEVVVPKVARPTIPRADVEVDVDLESHLDDGAYLWGTLLTLRDGRPLEDEGYRPFVTWSRLPDADEGRAFAEFWRWLTGIRDRAAGQGRSFRAYCYSRAAENGWLLSSAGRFGPEGTLAVVKGVPGVAEVRRFISSPLWVDVHEAVATQFVSTSGLGLKVVAPVAGFTWRDPEAGGEASLGWYRDAQAARGVERDAGRERILAYNEDDVRATRAVREWITRFG
SIO_010081: A6035_RS17690
subclass of: SO_0000673
so part of: A6035_RS17690
location: complement(join(37587..38048,1..366))
location: region:1-38048:-1
so has part: feature:1-366:-1:exon
so has part: feature:37587-38048:-1:exon

WP_244192628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-366:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37587-38048:-1:exon

A6035_RS17695
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17695
old locus tag: A6035_17415
so part of: sequence
location: complement(363..1556)
location: region:363-1556:-1
so has part: feature:363-1556:-1:exon
subclass of: SO_0000010

position:363:-1
position: 363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1556:-1
position: 1556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363-1556:-1:exon

A6035_RS17695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17695
old locus tag: A6035_17415
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEDAERTTGRVPDAAVVGPASGARCLHRVARERDARPGWWRTAPLDEGVRLRAMAAADRRAGLRERALAGARPDAAVVDVVGDHWTDLPGDVPGDDDEEVTLRALADGAALVWGAALPADEGSGRAGLRCTLAAVPGGGYAPVLVVNHKVVDPRRGKGSSTATVTRLLDWAPAPDPTLRVRRHPADLDRLVHAWRLLEAVGHAASSPVGAVLGLGSARAVVHDLEPVLDPADRTHATRLAVVRGELDTAPSRIGECRTCPWWEGWEDRDGPVEGCRGRLVLSDDVSLVVGGGQVGPLRARGMRTVADLAEAGPDRPADWNGEPYSDAVLRARWCTTSSRCSTRPTAPTPRDWRWCAVSWTPRPAGSANAAPARGGRGGRTGTGPSRGVAAGWSCPMT
SIO_010081: A6035_RS17695
subclass of: SO_0000673
so part of: A6035_RS17695
location: complement(363..1556)
location: region:363-1556:-1
so has part: feature:363-1556:-1:exon

WP_244192629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363-1556:-1:exon

A6035_RS17700
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17700
old locus tag: A6035_17420
so part of: sequence
location: 1638..2510
location: region:1638-2510:1
so has part: feature:1638-2510:1:exon
subclass of: SO_0000010

position:1638:1
position: 1638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2510:1
position: 2510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1638-2510:1:exon

A6035_RS17700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17700
old locus tag: A6035_17420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007626147.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6474 family protein
translation: MIATREGSTPMGKLTTYRDKRAGLRAHAAALKSTAMTEAKLAAKETRKQAREAHRVELAEAKKRAKLEGKNADRKAKREEKRAEKQNKLDRKAAKRDRKAEKVHAKEERKTIKREAKILAKDRKLAEKIDAAGRKHEYQLAEMELDKLKGTKLGKDDVQRWLNMAKVATPVLLPLVYKVVSNAQSSDKTAEAGGVDLKAAGINATGPAAALGARIVRLERTLDGLETSRGGEREVKDFVASTRTRLTDLRTAVETAETTPTAQRREIHSSISGELDRVNKDVLARLGVKA
SIO_010081: A6035_RS17700
subclass of: SO_0000673
so part of: A6035_RS17700
location: 1638..2510
location: region:1638-2510:1
so has part: feature:1638-2510:1:exon

WP_244192500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1638-2510:1:exon

A6035_RS17705
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17705
old locus tag: A6035_17425
so part of: sequence
location: 2507..3181
location: region:2507-3181:1
so has part: feature:2507-3181:1:exon
subclass of: SO_0000010

position:2507:1
position: 2507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3181:1
position: 3181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2507-3181:1:exon

A6035_RS17705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17705
old locus tag: A6035_17425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007626149.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper resistance protein CopC
translation: MTQLRGRLASVAVAAALLGGATAPAVMLAPVAAAHSVLISVDPEDGSQLDTAPEQIVLIFNEEVNQNFASVAVTAGDDRTNRVTGEPMVDGETVTARVDDLAPGAYTVGYRVTSADGHVVSGSSVFTVADAEGGAGADGGAAGADGGGEAEGGAGAEDSDAGGATASDAGGESADADATEADVADETSGESSGVNPVIWVVGGLAVLLIGGAFVLLRRGGGSGS
SIO_010081: A6035_RS17705
subclass of: SO_0000673
so part of: A6035_RS17705
location: 2507..3181
location: region:2507-3181:1
so has part: feature:2507-3181:1:exon

WP_108846347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2507-3181:1:exon

A6035_RS17710
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17710
old locus tag: A6035_17430
so part of: sequence
location: 3501..3704
location: region:3501-3704:1
so has part: feature:3501-3704:1:exon
subclass of: SO_0000010

position:3501:1
position: 3501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3704:1
position: 3704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3501-3704:1:exon

A6035_RS17710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17710
old locus tag: A6035_17430
inference: COORDINATES: protein motif:HMM:NF028358.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: neutral/alkaline non-lysosomal ceramidase C-terminal domain-containing protein
translation: MRVHDDGDWSTIIVFEGLLTVTNALITWDIPPGTPAGEYRVVYTASGRGLDGRLFPVRGESRAFDVR
SIO_010081: A6035_RS17710
subclass of: SO_0000673
so part of: A6035_RS17710
location: 3501..3704
location: region:3501-3704:1
so has part: feature:3501-3704:1:exon

WP_244192502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3501-3704:1:exon

A6035_RS17715
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17715
old locus tag: A6035_17435
so part of: sequence
location: 3766..4533
location: region:3766-4533:1
so has part: feature:3766-4533:1:exon
subclass of: SO_0000010

position:3766:1
position: 3766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4533:1
position: 4533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3766-4533:1:exon

A6035_RS17715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17715
old locus tag: A6035_17435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011596523.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MDIKGASVIVTGAASGLGNATARSFAEKGAVVFGLDLQQSIDKAVEQGIDEGITLIAADVTSEDDVKAAIARATEAAPLRVVVNCAGIAPAARIVSKKGVHALDLFETCISVNLVGTFNVLRLAAEAMSTQDTVDEDGQRGVIINTASVAAYEGQVGQIAYAASKGGVYSMGICAARDLAQFGIRVNTIAPGTIETPMLKGLTEEFQKSLEAAIPFPSRLGRPSDYAQLANAIVEHDYLNGESFRMDGALRMAPR
SIO_010081: A6035_RS17715
subclass of: SO_0000673
so part of: A6035_RS17715
location: 3766..4533
location: region:3766-4533:1
so has part: feature:3766-4533:1:exon

WP_108846351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3766-4533:1:exon

A6035_RS17720
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17720
pseudo: true
so part of: sequence
location: <4665..4790
location: region:4665-4790:1
so has part: feature:4665-4790:1:exon
subclass of: SO_0000010

position:4665:1
position: 4665
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:4790:1
position: 4790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4665-4790:1:exon

A6035_RS17720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011596523.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 3-hydroxyacyl-CoA dehydrogenase
SIO_010081: A6035_RS17720
subclass of: SO_0000673
so part of: A6035_RS17720
location: <4665..4790
location: region:4665-4790:1
so has part: feature:4665-4790:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4665-4790:1:exon

A6035_RS17725
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17725
old locus tag: A6035_17440
so part of: sequence
location: complement(4912..5544)
location: region:4912-5544:-1
so has part: feature:4912-5544:-1:exon
subclass of: SO_0000010

position:4912:-1
position: 4912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5544:-1
position: 5544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4912-5544:-1:exon

A6035_RS17725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17725
old locus tag: A6035_17440
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTFTTRKAAAVAAAAALTMAGLPGVAGAQTGGLDSGSLGLVSDSLEGGSLEIFPEDNATGEGSLDTSGSTLLGEPTTGSFAPLTGSLADNGSVDVLTPAEGTGSVDTSGSALIGEPTTGSLAPLYAPVAGSLGIGDGATTVIEDPAVLIPVVLVGATVAAAVTFAPQIQQALLDAGIVLPPLPGLPAPAGAPAPAPAPPAPGPAIDNGRG
SIO_010081: A6035_RS17725
subclass of: SO_0000673
so part of: A6035_RS17725
location: complement(4912..5544)
location: region:4912-5544:-1
so has part: feature:4912-5544:-1:exon

WP_108846349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4912-5544:-1:exon

A6035_RS17730
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17730
old locus tag: A6035_17445
so part of: sequence
location: complement(5873..6874)
location: region:5873-6874:-1
so has part: feature:5873-6874:-1:exon
subclass of: SO_0000010

position:5873:-1
position: 5873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6874:-1
position: 6874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5873-6874:-1:exon

A6035_RS17730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17730
old locus tag: A6035_17445
inference: COORDINATES: protein motif:HMM:TIGR03491.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TM0106 family RecB-like putative nuclease
translation: MLDPADRTHATRLAVVRGELDTAPSRIGECRTCPWWEGWEDRDGPVEGCRGRLVLSDDVSLVVGGGQVGPLRARGMRTVADLAEAGPDRPADWNGEPYSDAVLRARAHRDGEVVVPKVARPTIPRADVEVDVDLESHLDDGAYLWGTLLTLRDGRPLEDEGYRPFVTWSRLPDADEGRAFAEFWRWLTGIRDRAAGQGRSFRAYCYSRAAENGWLLSSAGRFGPEGTLAVVKGVPGVAEVRRFISSPLWVDVHEAVATQFVSTSGLGLKVVAPVAGFTWRDPEAGGEASLGWYRDAQAARGVERDAGRERILAYNEDDVRATRAVREWITRFG
SIO_010081: A6035_RS17730
subclass of: SO_0000673
so part of: A6035_RS17730
location: complement(5873..6874)
location: region:5873-6874:-1
so has part: feature:5873-6874:-1:exon

WP_244192501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5873-6874:-1:exon

A6035_RS17735
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17735
old locus tag: A6035_17450
so part of: sequence
location: 7972..8844
location: region:7972-8844:1
so has part: feature:7972-8844:1:exon
subclass of: SO_0000010

position:7972:1
position: 7972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8844:1
position: 8844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7972-8844:1:exon

A6035_RS17735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17735
old locus tag: A6035_17450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007626147.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6474 family protein
translation: MIATREGSTPMGKLTTYRDKRAGLRAHAAALKSTAMTEAKLAAKETRKQAREAHRVELAEAKKRAKLEGKNADRKAKREEKRAEKQNKLDRKAAKRDRKAEKVHAKEERKTIKREAKILAKDRKLAEKIDAAGRKHEYQLAEMELDKLKGTKLGKDDVQRWLNMAKVATPVLLPLVYKVVSNAQSSDKTAEAGGVDLKAAGINATGPAAALGARIVRLERTLDGLETSRGGEREVKDFVASTRTRLTDLRTAVETAETTPTAQRREIHSSISGELDRVNKDVLARLGVKA
SIO_010081: A6035_RS17735
subclass of: SO_0000673
so part of: A6035_RS17735
location: 7972..8844
location: region:7972-8844:1
so has part: feature:7972-8844:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7972-8844:1:exon

A6035_RS17740
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17740
old locus tag: A6035_17455
so part of: sequence
location: 8841..9515
location: region:8841-9515:1
so has part: feature:8841-9515:1:exon
subclass of: SO_0000010

position:8841:1
position: 8841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9515:1
position: 9515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8841-9515:1:exon

A6035_RS17740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17740
old locus tag: A6035_17455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007626149.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper resistance protein CopC
translation: MTQLRGRLASVAVAAALLGGATAPAVMLAPVAAAHSVLISVDPEDGSQLDTAPEQIVLIFNEEVNQNFASVAVTAGDDRTNRVTGEPMVDGETVTARVDDLAPGAYTVGYRVTSADGHVVSGSSVFTVADAEGGAGADGGAAGADGGGEAEGGAGAEDSDAGGATASDAGGESADADATEADVADETSGESSGVNPVIWVVGGLAVLLIGGAFVLLRRGGGSGS
SIO_010081: A6035_RS17740
subclass of: SO_0000673
so part of: A6035_RS17740
location: 8841..9515
location: region:8841-9515:1
so has part: feature:8841-9515:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8841-9515:1:exon

A6035_RS17745
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17745
old locus tag: A6035_17460
so part of: sequence
location: 9835..10038
location: region:9835-10038:1
so has part: feature:9835-10038:1:exon
subclass of: SO_0000010

position:9835:1
position: 9835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10038:1
position: 10038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9835-10038:1:exon

A6035_RS17745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17745
old locus tag: A6035_17460
inference: COORDINATES: protein motif:HMM:NF028358.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: neutral/alkaline non-lysosomal ceramidase C-terminal domain-containing protein
translation: MRVHDDGDWSTIIVFEGLLTVTNALITWDIPPGTPAGEYRVVYTASGRGLDGRLFPVRGESRAFDVR
SIO_010081: A6035_RS17745
subclass of: SO_0000673
so part of: A6035_RS17745
location: 9835..10038
location: region:9835-10038:1
so has part: feature:9835-10038:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9835-10038:1:exon

A6035_RS17750
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17750
old locus tag: A6035_17465
so part of: sequence
location: 10100..10867
location: region:10100-10867:1
so has part: feature:10100-10867:1:exon
subclass of: SO_0000010

position:10100:1
position: 10100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10867:1
position: 10867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10100-10867:1:exon

A6035_RS17750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17750
old locus tag: A6035_17465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011596523.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MDIKGASVIVTGAASGLGNATARSFAEKGAVVFGLDLQQSIDKAVEQGIDEGITLIAADVTSEDDVKAAIARATEAAPLRVVVNCAGIAPAARIVSKKGVHALDLFETCISVNLVGTFNVLRLAAEAMSTQDTVDEDGQRGVIINTASVAAYEGQVGQIAYAASKGGVYSMGICAARDLAQFGIRVNTIAPGTIETPMLKGLTEEFQKSLEAAIPFPSRLGRPSDYAQLANAIVEHDYLNGESFRMDGALRMAPR
SIO_010081: A6035_RS17750
subclass of: SO_0000673
so part of: A6035_RS17750
location: 10100..10867
location: region:10100-10867:1
so has part: feature:10100-10867:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10100-10867:1:exon

A6035_RS17755
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17755
pseudo: true
so part of: sequence
location: <10999..11124
location: region:10999-11124:1
so has part: feature:10999-11124:1:exon
subclass of: SO_0000010

position:10999:1
position: 10999
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:11124:1
position: 11124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10999-11124:1:exon

A6035_RS17755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011596523.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 3-hydroxyacyl-CoA dehydrogenase
SIO_010081: A6035_RS17755
subclass of: SO_0000673
so part of: A6035_RS17755
location: <10999..11124
location: region:10999-11124:1
so has part: feature:10999-11124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10999-11124:1:exon

A6035_RS17760
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17760
old locus tag: A6035_17470
so part of: sequence
location: complement(11246..11878)
location: region:11246-11878:-1
so has part: feature:11246-11878:-1:exon
subclass of: SO_0000010

position:11246:-1
position: 11246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11878:-1
position: 11878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11246-11878:-1:exon

A6035_RS17760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17760
old locus tag: A6035_17470
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTFTTRKAAAVAAAAALTMAGLPGVAGAQTGGLDSGSLGLVSDSLEGGSLEIFPEDNATGEGSLDTSGSTLLGEPTTGSFAPLTGSLADNGSVDVLTPAEGTGSVDTSGSALIGEPTTGSLAPLYAPVAGSLGIGDGATTVIEDPAVLIPVVLVGATVAAAVTFAPQIQQALLDAGIVLPPLPGLPAPAGAPAPAPAPPAPGPAIDNGRG
SIO_010081: A6035_RS17760
subclass of: SO_0000673
so part of: A6035_RS17760
location: complement(11246..11878)
location: region:11246-11878:-1
so has part: feature:11246-11878:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11246-11878:-1:exon

A6035_RS17765
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17765
old locus tag: A6035_17475
so part of: sequence
location: complement(12207..13568)
location: region:12207-13568:-1
so has part: feature:12207-13568:-1:exon
subclass of: SO_0000010

position:12207:-1
position: 12207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13568:-1
position: 13568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12207-13568:-1:exon

A6035_RS17765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17765
old locus tag: A6035_17475
inference: COORDINATES: protein motif:HMM:TIGR03491.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TM0106 family RecB-like putative nuclease
translation: MVHDLEPVLDPADRTHATRLAVVRGELDTAPSRIGECRTCPWWEGWEDRDGPVEGCRGRLVLSDDVSLVVGGGQVGPLRARGMRTVADLAEAGPDRPADWNGEPYSDAVLRARWCTTSSRCSTRPTAPTPRDWRWCAVSWTPRPAGSANAAPARGGRGGRTGTGPSRGVAAGWFLSDDVSLVVGGGQVGPLRARGMRTVADLAEAGPDRPADWNGEPYSDAVLRARAHRDGEVVVPKVARPTIPRADVEVDVDLESHLDDGAYLWGTLLTLRDGRPLEDEGYRPFVTWSRLPDADEGRAFAEFWRWLTGIRDRAAGQGRSFRAYCYSRAAENGWLLSSAGRFGPEGTLAVVKGVPGVAEVRRFISSPLWVDVHEAVATQFVSTSGLGLKVVAPVAGFTWRDPEAGGEASLGWYRDAQAARGVERDAGRERILAYNEDDVRATRAVREWITRFG
SIO_010081: A6035_RS17765
subclass of: SO_0000673
so part of: A6035_RS17765
location: complement(12207..13568)
location: region:12207-13568:-1
so has part: feature:12207-13568:-1:exon

WP_244192630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12207-13568:-1:exon

A6035_RS18930
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS18930
so part of: sequence
location: complement(13492..13989)
location: region:13492-13989:-1
so has part: feature:13492-13989:-1:exon
subclass of: SO_0000010

position:13492:-1
position: 13492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13989:-1
position: 13989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13492-13989:-1:exon

A6035_RS18930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS18930
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVGDHWTDLPGDVPGDDDEEVTLRALADGAALVWGAALPADEGSGRAGLRCTLAAVPGGGYAPVLVVNHKVVDPRRGKGSSTATVTRLLDWAPAPDPTLRVRRHPADLDRLVHAWRLLEAVGHAASSPVGAVLGLGSARAGGARPRAGARPGRPHPRHETGGGAR
SIO_010081: A6035_RS18930
subclass of: SO_0000673
so part of: A6035_RS18930
location: complement(13492..13989)
location: region:13492-13989:-1
so has part: feature:13492-13989:-1:exon

WP_244192631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13492-13989:-1:exon

A6035_RS18935
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS18935
so part of: sequence
location: complement(13943..14227)
location: region:13943-14227:-1
so has part: feature:13943-14227:-1:exon
subclass of: SO_0000010

position:13943:-1
position: 13943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14227:-1
position: 14227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13943-14227:-1:exon

A6035_RS18935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS18935
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEDAERTTGRVPDAAVVGPASGARCLHRVARERDARPGWWRTAPLDEGVRLRAMAAADRRAGLRERALAGARPRRRGGGRGGGPLDGSARGRTG
SIO_010081: A6035_RS18935
subclass of: SO_0000673
so part of: A6035_RS18935
location: complement(13943..14227)
location: region:13943-14227:-1
so has part: feature:13943-14227:-1:exon

WP_244192632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13943-14227:-1:exon

A6035_RS17775
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17775
old locus tag: A6035_17485
so part of: sequence
location: 14309..15181
location: region:14309-15181:1
so has part: feature:14309-15181:1:exon
subclass of: SO_0000010

position:14309:1
position: 14309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15181:1
position: 15181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14309-15181:1:exon

A6035_RS17775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17775
old locus tag: A6035_17485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007626147.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6474 family protein
translation: MIATREGSTPMGKLTTYRDKRAGLRAHAAALKSTAMTEAKLAAKETRKQAREAHRVELAEAKKRAKLEGKNADRKAKREEKRAEKQNKLDRKAAKRDRKAEKVHAKEERKTIKREAKILAKDRKLAEKIDAAGRKHEYQLAEMELDKLKGTKLGKDDVQRWLNMAKVATPVLLPLVYKVVSNAQSSDKTAEAGGVDLKAAGINATGPAAALGARIVRLERTLDGLETSRGGEREVKDFVASTRTRLTDLRTAVETAETTPTAQRREIHSSISGELDRVNKDVLARLGVKA
SIO_010081: A6035_RS17775
subclass of: SO_0000673
so part of: A6035_RS17775
location: 14309..15181
location: region:14309-15181:1
so has part: feature:14309-15181:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14309-15181:1:exon

A6035_RS17780
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17780
old locus tag: A6035_17490
so part of: sequence
location: 15178..15852
location: region:15178-15852:1
so has part: feature:15178-15852:1:exon
subclass of: SO_0000010

position:15178:1
position: 15178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15852:1
position: 15852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15178-15852:1:exon

A6035_RS17780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17780
old locus tag: A6035_17490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007626149.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper resistance protein CopC
translation: MTQLRGRLASVAVAAALLGGATAPAVMLAPVAAAHSVLISVDPEDGSQLDTAPEQIVLIFNEEVNQNFASVAVTAGDDRTNRVTGEPMVDGETVTARVDDLAPGAYTVGYRVTSADGHVVSGSSVFTVADAEGGAGADGGAAGADGGGEAEGGAGAEDSDAGGATASDAGGESADADATEADVADETSGESSGVNPVIWVVGGLAVLLIGGAFVLLRRGGGSGS
SIO_010081: A6035_RS17780
subclass of: SO_0000673
so part of: A6035_RS17780
location: 15178..15852
location: region:15178-15852:1
so has part: feature:15178-15852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15178-15852:1:exon

A6035_RS17785
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17785
old locus tag: A6035_17495
so part of: sequence
location: 16172..16375
location: region:16172-16375:1
so has part: feature:16172-16375:1:exon
subclass of: SO_0000010

position:16172:1
position: 16172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16375:1
position: 16375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16172-16375:1:exon

A6035_RS17785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17785
old locus tag: A6035_17495
inference: COORDINATES: protein motif:HMM:NF028358.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: neutral/alkaline non-lysosomal ceramidase C-terminal domain-containing protein
translation: MRVHDDGDWSTIIVFEGLLTVTNALITWDIPPGTPAGEYRVVYTASGRGLDGRLFPVRGESRAFDVR
SIO_010081: A6035_RS17785
subclass of: SO_0000673
so part of: A6035_RS17785
location: 16172..16375
location: region:16172-16375:1
so has part: feature:16172-16375:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16172-16375:1:exon

A6035_RS17790
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17790
old locus tag: A6035_17500
so part of: sequence
location: 16437..17207
location: region:16437-17207:1
so has part: feature:16437-17207:1:exon
subclass of: SO_0000010

position:16437:1
position: 16437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17207:1
position: 17207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16437-17207:1:exon

A6035_RS17790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17790
old locus tag: A6035_17500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011596523.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MDIKGASVIVTGAASGLGNATARSFAEKGAVVFGLDLQQSIDKAVEQGIDEGITLIAADVTSEDDVKAAIARATEAAPLRVVVNCAGIAPGRPHRLQEGRPPRSTCFETCISVNLVGTFNVLRLAAEAMSTQDTVDEDGQRGVIINTASVAAYEGQVGQIAYAASKGGVYSMGICAARDLAQFGIRVNTIAPGTIETPMLKGLTEEFQKSLEAAIPFPSRLGRPSDYAQLANAIVEHDYLNGESFRMDGALRMAPR
SIO_010081: A6035_RS17790
subclass of: SO_0000673
so part of: A6035_RS17790
location: 16437..17207
location: region:16437-17207:1
so has part: feature:16437-17207:1:exon

WP_108849420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16437-17207:1:exon

A6035_RS17795
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17795
pseudo: true
so part of: sequence
location: <17339..17464
location: region:17339-17464:1
so has part: feature:17339-17464:1:exon
subclass of: SO_0000010

position:17339:1
position: 17339
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:17464:1
position: 17464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17339-17464:1:exon

A6035_RS17795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011596523.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 3-hydroxyacyl-CoA dehydrogenase
SIO_010081: A6035_RS17795
subclass of: SO_0000673
so part of: A6035_RS17795
location: <17339..17464
location: region:17339-17464:1
so has part: feature:17339-17464:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17339-17464:1:exon

A6035_RS17800
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17800
old locus tag: A6035_17505
so part of: sequence
location: complement(17587..18219)
location: region:17587-18219:-1
so has part: feature:17587-18219:-1:exon
subclass of: SO_0000010

position:17587:-1
position: 17587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18219:-1
position: 18219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17587-18219:-1:exon

A6035_RS17800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17800
old locus tag: A6035_17505
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTFTTRKAAAVAAAAALTMAGLPGVAGAQTGGLDSGSLGLVSDSLEGGSLEIFPEDNATGEGSLDTSGSTLLGEPTTGSFAPLTGSLADNGSVDVLTPAEGTGSVDTSGSALIGEPTTGSLAPLYAPVAGSLGIGDGATTVIEDPAVLIPVVLVGATVAAAVTFAPQIQQALLDAGIVLPPLPGLPAPAGAPAPAPAPPAPGPAIDNGRG
SIO_010081: A6035_RS17800
subclass of: SO_0000673
so part of: A6035_RS17800
location: complement(17587..18219)
location: region:17587-18219:-1
so has part: feature:17587-18219:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17587-18219:-1:exon

A6035_RS17805
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17805
old locus tag: A6035_17510
so part of: sequence
location: complement(18534..19550)
location: region:18534-19550:-1
so has part: feature:18534-19550:-1:exon
subclass of: SO_0000010

position:18534:-1
position: 18534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19550:-1
position: 19550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18534-19550:-1:exon

A6035_RS17805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17805
old locus tag: A6035_17510
inference: COORDINATES: protein motif:HMM:TIGR03491.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TM0106 family RecB-like putative nuclease
translation: MLDPADRTHATRLAVVRGELDTAPSRIGECRTCPWWEGWEDRDGPVEGCRGRLVLSDDVSLVVGGGQVGPLRARGMRTVADLAEAGPDRPADWNGEPYSDAVLRARAHRDGEVVVPKVARPTIPRADVEVDVDLESHLDDGAYLWGTLLTLRDGRPLEDEGYRPFVTWSRLPDADEGRAFAEFWRWLTGIRDRAAGQGRSFRAYCYSRAAENGWLLSSAGRFGPEGTLAVVKGVPGVAEVRRFISSPLWVDVHEAVATQFVSTSGLGLKVVAPVAGFTWRDPEAGGEASLGWYRDAQAARGVERDAGRERILAYNEDDVRATRAVREWITRFGLSRRP
SIO_010081: A6035_RS17805
subclass of: SO_0000673
so part of: A6035_RS17805
location: complement(18534..19550)
location: region:18534-19550:-1
so has part: feature:18534-19550:-1:exon

WP_244192633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18534-19550:-1:exon

A6035_RS17810
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17810
so part of: sequence
location: complement(20266..20568)
location: region:20266-20568:-1
so has part: feature:20266-20568:-1:exon
subclass of: SO_0000010

position:20266:-1
position: 20266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20568:-1
position: 20568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20266-20568:-1:exon

A6035_RS17810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17810
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEDAERTTGRVPDAAVVGPASGARCLHRVARERDARPGWWRTAPLDEGVRLRAMAAAGSPRGVEGARAGGRAPPTPRWWTWWGTTGRICRGTYRVTTTRR
SIO_010081: A6035_RS17810
subclass of: SO_0000673
so part of: A6035_RS17810
location: complement(20266..20568)
location: region:20266-20568:-1
so has part: feature:20266-20568:-1:exon

WP_244192616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20266-20568:-1:exon

A6035_RS18940
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS18940
so part of: sequence
location: 20650..21135
location: region:20650-21135:1
so has part: feature:20650-21135:1:exon
subclass of: SO_0000010

position:20650:1
position: 20650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21135:1
position: 21135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20650-21135:1:exon

A6035_RS18940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS18940
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIATREGSTPMGKLTTYRDKRAGLRAHAAALKSTAMTEAKLAAKETRKQAREAHRVELAEAKKRAKLEGKNADRKAKREEKRAEKQNKLDRKAAKRDRKAEKVHAKEERKTIKREAKILAKDRKLAEKIDAAGRKHEYQLAEMELDKLKGTSWARTTCNVG
SIO_010081: A6035_RS18940
subclass of: SO_0000673
so part of: A6035_RS18940
location: 20650..21135
location: region:20650-21135:1
so has part: feature:20650-21135:1:exon

WP_244192617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20650-21135:1:exon

A6035_RS18945
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS18945
so part of: sequence
location: 21105..21521
location: region:21105-21521:1
so has part: feature:21105-21521:1:exon
subclass of: SO_0000010

position:21105:1
position: 21105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21521:1
position: 21521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21105-21521:1:exon

A6035_RS18945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS18945
inference: COORDINATES: protein motif:HMM:NF040114.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKDDVQRWLNMAKVATPVLLPLVYKVVSNAQSSDKTAEAAGSTSRQPASTPPASTPPAPPPPWVRGSSASTGSRRAAVASGGQGFRRLHPHAPDRPAHGRRDRRDHAHRQRRETTPTAQRREIHSSISGELDRVNKA
SIO_010081: A6035_RS18945
subclass of: SO_0000673
so part of: A6035_RS18945
location: 21105..21521
location: region:21105-21521:1
so has part: feature:21105-21521:1:exon

WP_244192634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21105-21521:1:exon

A6035_RS19260
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS19260
so part of: sequence
location: 21518..21766
location: region:21518-21766:1
so has part: feature:21518-21766:1:exon
subclass of: SO_0000010

position:21518:1
position: 21518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21766:1
position: 21766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21518-21766:1:exon

A6035_RS19260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS19260
inference: COORDINATES: protein motif:HMM:NF016149.2
GO component: GO:0042597 - periplasmic space [Evidence IEA]
GO function: GO:0005507 - copper ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper resistance protein CopC
translation: MTQLRGRLASVAVAAALLGGATAPAVMLAPVAAAHSVLISVDPEDGSQLDTAPEQIVLIFNEEVNQNFASVAVTAVMTGPIA
SIO_010081: A6035_RS19260
subclass of: SO_0000673
so part of: A6035_RS19260
location: 21518..21766
location: region:21518-21766:1
so has part: feature:21518-21766:1:exon

WP_279629911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21518-21766:1:exon

A6035_RS17820
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17820
old locus tag: A6035_17520
so part of: sequence
location: 21763..22113
location: region:21763-22113:1
so has part: feature:21763-22113:1:exon
subclass of: SO_0000010

position:21763:1
position: 21763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22113:1
position: 22113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21763-22113:1:exon

A6035_RS17820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17820
old locus tag: A6035_17520
inference: COORDINATES: protein motif:HMM:NF016149.2
GO component: GO:0042597 - periplasmic space [Evidence IEA]
GO function: GO:0005507 - copper ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper resistance protein CopC
translation: MTGEPMVDGETVTARVTGEPMVDGETVGYRVTSADGHVVSGSSVFTVADGHVVSGSSVFTVADAEGGGEAEGGAGAEDSDAGGATVPTPGGESADADATEADVATRPPERAPGSIP
SIO_010081: A6035_RS17820
subclass of: SO_0000673
so part of: A6035_RS17820
location: 21763..22113
location: region:21763-22113:1
so has part: feature:21763-22113:1:exon

WP_279629912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21763-22113:1:exon

A6035_RS17825
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17825
old locus tag: A6035_17525
pseudo: true
so part of: sequence
location: 22886..23592
location: region:22886-23592:1
so has part: feature:22886-23592:1:exon
subclass of: SO_0000010

position:22886:1
position: 22886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23592:1
position: 23592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22886-23592:1:exon

A6035_RS17825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17825
old locus tag: A6035_17525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010539873.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
SIO_010081: A6035_RS17825
subclass of: SO_0000673
so part of: A6035_RS17825
location: 22886..23592
location: region:22886-23592:1
so has part: feature:22886-23592:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22886-23592:1:exon

A6035_RS17830
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17830
pseudo: true
so part of: sequence
location: <23746..23856
location: region:23746-23856:1
so has part: feature:23746-23856:1:exon
subclass of: SO_0000010

position:23746:1
position: 23746
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:23856:1
position: 23856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23746-23856:1:exon

A6035_RS17830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011596523.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 3-hydroxyacyl-CoA dehydrogenase
SIO_010081: A6035_RS17830
subclass of: SO_0000673
so part of: A6035_RS17830
location: <23746..23856
location: region:23746-23856:1
so has part: feature:23746-23856:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23746-23856:1:exon

A6035_RS18370
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS18370
so part of: sequence
location: complement(23853..24179)
location: region:23853-24179:-1
so has part: feature:23853-24179:-1:exon
subclass of: SO_0000010

position:23853:-1
position: 23853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24179:-1
position: 24179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23853-24179:-1:exon

A6035_RS18370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS18370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLVGATVAAAVTFAPQIQQALLDAGIVLPPLPGLPAPAGAPAPAPAPGPRAGPAGPRPRLIPAPATTAGPPRLRLQARSRDGGGLQSSGALRRGGSSSAAVPLAQRAV
SIO_010081: A6035_RS18370
subclass of: SO_0000673
so part of: A6035_RS18370
location: complement(23853..24179)
location: region:23853-24179:-1
so has part: feature:23853-24179:-1:exon

WP_162534036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23853-24179:-1:exon

A6035_RS17835
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17835
old locus tag: A6035_17530
so part of: sequence
location: complement(24815..26071)
location: region:24815-26071:-1
so has part: feature:24815-26071:-1:exon
subclass of: SO_0000010

position:24815:-1
position: 24815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26071:-1
position: 26071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24815-26071:-1:exon

A6035_RS17835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17835
old locus tag: A6035_17530
inference: COORDINATES: protein motif:HMM:TIGR03491.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TM0106 family RecB-like putative nuclease
translation: MRTVADLAEAGPDRPADWNGEPYSDAVLRARWCTTSSRCSTRPTRTHATRLAVVRGELDTAPSRIGECRTCPWWEGWEDRDGPVEGCRGRLVLSDDVSLVVGGGQVGPLRARGMRTVADLAEAGPDRPADWNGEPYSDAVLRARAHRDGEVVVPKVARPTIPRADVEVDVDLESHLDDGAYLWGTLLTLRDGRPLEDEGYRPFVTWSRLPDADEGRAFAEFWRWLTGIRDRAAGQGRSFRAYCYSRAAENGWLLSSAGRFGPEGTLAVVKGVPGVAEVRRFISSPLWVDVHEAVATQFVSTSGLGLKVVAPVAGFTWRDPEAGGEASLGGTGTRRRPGASNATPGASGSSPTTRTTSAPRGPCGSGSRGSAESAPVTGEYRRPLIRPGAGPSGGERPRRGPKRRCAPHSPCGRKDLGA
SIO_010081: A6035_RS17835
subclass of: SO_0000673
so part of: A6035_RS17835
location: complement(24815..26071)
location: region:24815-26071:-1
so has part: feature:24815-26071:-1:exon

WP_244192618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24815-26071:-1:exon

A6035_RS18950
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS18950
so part of: sequence
location: complement(26118..26483)
location: region:26118-26483:-1
so has part: feature:26118-26483:-1:exon
subclass of: SO_0000010

position:26118:-1
position: 26118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26483:-1
position: 26483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26118-26483:-1:exon

A6035_RS18950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS18950
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRLLDWAPAPDPTLRVRRHPADLDRLVHAWRLLEAVGHAASSPVGAVLGLGSARAVVHDLEPVLDPADRTHATRLAVVRGELDTAPSRIGECRTCPWWEGWEDRDGPSRGVAAGWSCPMT
SIO_010081: A6035_RS18950
subclass of: SO_0000673
so part of: A6035_RS18950
location: complement(26118..26483)
location: region:26118-26483:-1
so has part: feature:26118-26483:-1:exon

WP_244192619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26118-26483:-1:exon

A6035_RS18955
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS18955
so part of: sequence
location: complement(26589..26924)
location: region:26589-26924:-1
so has part: feature:26589-26924:-1:exon
subclass of: SO_0000010

position:26589:-1
position: 26589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26924:-1
position: 26924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26589-26924:-1:exon

A6035_RS18955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS18955
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGPASGARCLHRVARERDARPGWWRTAPLDEGVRLRAMAAADRRAGLRERALAGARPDAAVVDVVGDHWTDLPGDVPGDDDEEVTLRALADGAALVWGAALPPMRAVAGRA
SIO_010081: A6035_RS18955
subclass of: SO_0000673
so part of: A6035_RS18955
location: complement(26589..26924)
location: region:26589-26924:-1
so has part: feature:26589-26924:-1:exon

WP_244192620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26589-26924:-1:exon

A6035_RS18960
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS18960
pseudo: true
so part of: sequence
location: <27512..27889
location: region:27512-27889:1
so has part: feature:27512-27889:1:exon
subclass of: SO_0000010

position:27512:1
position: 27512
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:27889:1
position: 27889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27512-27889:1:exon

A6035_RS18960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS18960
inference: COORDINATES: protein motif:HMM:NF040114.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: A6035_RS18960
subclass of: SO_0000673
so part of: A6035_RS18960
location: <27512..27889
location: region:27512-27889:1
so has part: feature:27512-27889:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27512-27889:1:exon

A6035_RS18965
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS18965
so part of: sequence
location: 27923..28282
location: region:27923-28282:1
so has part: feature:27923-28282:1:exon
subclass of: SO_0000010

position:27923:1
position: 27923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28282:1
position: 28282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27923-28282:1:exon

A6035_RS18965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS18965
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: copper resistance protein CopC
translation: MTQLRGRLASVAVAAALLGGATAPAVMLAPVAAAHSVLISVDPEDGSQLDTAPEQIVLIFNEEVNQNFASVAVTAGDDRTNRVTGEPMVDGETVTARVDDLAPAPTPSAIASPRPTGTS
SIO_010081: A6035_RS18965
subclass of: SO_0000673
so part of: A6035_RS18965
location: 27923..28282
location: region:27923-28282:1
so has part: feature:27923-28282:1:exon

WP_244192621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27923-28282:1:exon

A6035_RS18970
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS18970
so part of: sequence
location: 28279..28596
location: region:28279-28596:1
so has part: feature:28279-28596:1:exon
subclass of: SO_0000010

position:28279:1
position: 28279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28596:1
position: 28596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28279-28596:1:exon

A6035_RS18970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS18970
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGSSVFTVADAEGGAGADGGAAGADGGARLREVPGLRIPMLAVPRLPTPVASRRTPMRPRPDVADETSGESSGVNPVIWVVGGLAVLLIGGAFVLLRRGGGSGS
SIO_010081: A6035_RS18970
subclass of: SO_0000673
so part of: A6035_RS18970
location: 28279..28596
location: region:28279-28596:1
so has part: feature:28279-28596:1:exon

WP_244192622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28279-28596:1:exon

A6035_RS19265
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS19265
pseudo: true
so part of: sequence
location: 29177..>29581
location: region:29177-29581:1
so has part: feature:29177-29581:1:exon
subclass of: SO_0000010

position:29177:1
position: 29177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29581:1
position: 29581
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29177-29581:1:exon

A6035_RS19265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS19265
inference: COORDINATES: protein motif:HMM:NF013530.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
SIO_010081: A6035_RS19265
subclass of: SO_0000673
so part of: A6035_RS19265
location: 29177..>29581
location: region:29177-29581:1
so has part: feature:29177-29581:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29177-29581:1:exon

A6035_RS19270
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS19270
so part of: sequence
location: 29605..30003
location: region:29605-30003:1
so has part: feature:29605-30003:1:exon
subclass of: SO_0000010

position:29605:1
position: 29605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30003:1
position: 30003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29605-30003:1:exon

A6035_RS19270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS19270
inference: COORDINATES: protein motif:HMM:NF024950.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MNTASVAAYEGQVGQIAYAASKGGVYSMGICAARDLAQFGIRVNTIARAPSRPRCSRPDRGVPEVPRGRDPVPVAPRPPVGLRAAGQRDRRARLPQRRELPHGRRPAHGAALDSALRQRDRRARRTAAPQRS
SIO_010081: A6035_RS19270
subclass of: SO_0000673
so part of: A6035_RS19270
location: 29605..30003
location: region:29605-30003:1
so has part: feature:29605-30003:1:exon

WP_279629913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29605-30003:1:exon

A6035_RS17865
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17865
pseudo: true
so part of: sequence
location: <30072..30197
location: region:30072-30197:1
so has part: feature:30072-30197:1:exon
subclass of: SO_0000010

position:30072:1
position: 30072
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:30197:1
position: 30197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30072-30197:1:exon

A6035_RS17865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011596523.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 3-hydroxyacyl-CoA dehydrogenase
SIO_010081: A6035_RS17865
subclass of: SO_0000673
so part of: A6035_RS17865
location: <30072..30197
location: region:30072-30197:1
so has part: feature:30072-30197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30072-30197:1:exon

A6035_RS17870
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17870
old locus tag: A6035_17560
so part of: sequence
location: complement(30280..30606)
location: region:30280-30606:-1
so has part: feature:30280-30606:-1:exon
subclass of: SO_0000010

position:30280:-1
position: 30280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30606:-1
position: 30606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30280-30606:-1:exon

A6035_RS17870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17870
old locus tag: A6035_17560
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSPPGSLAPLYAPVAGSLGIGDGATTVIEDPAVLIPVVLVGATVAAAVTFAPQIQQALLDAGIVLPPLPGLPAPAGAPAPAPAPPAPGRRSTTAAADTPPPTTAGPLP
SIO_010081: A6035_RS17870
subclass of: SO_0000673
so part of: A6035_RS17870
location: complement(30280..30606)
location: region:30280-30606:-1
so has part: feature:30280-30606:-1:exon

WP_108849421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30280-30606:-1:exon

A6035_RS18375
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS18375
so part of: sequence
location: complement(30610..30885)
location: region:30610-30885:-1
so has part: feature:30610-30885:-1:exon
subclass of: SO_0000010

position:30610:-1
position: 30610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30885:-1
position: 30885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30610-30885:-1:exon

A6035_RS18375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS18375
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAGLPGVAGAQTGGLDSGSLGLVSDSLEGGSLEIFPEDNATGEGPSTRPVPPARRADHRFLRAADRLLADNGSSTSSRPRAPDPWTPPARR
SIO_010081: A6035_RS18375
subclass of: SO_0000673
so part of: A6035_RS18375
location: complement(30610..30885)
location: region:30610-30885:-1
so has part: feature:30610-30885:-1:exon

WP_162534037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30610-30885:-1:exon

A6035_RS17875
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17875
old locus tag: A6035_17565
so part of: sequence
location: complement(31407..32285)
location: region:31407-32285:-1
so has part: feature:31407-32285:-1:exon
subclass of: SO_0000010

position:31407:-1
position: 31407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32285:-1
position: 32285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31407-32285:-1:exon

A6035_RS17875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17875
old locus tag: A6035_17565
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVHDLEPVLDPADRTHATRLAVVRGELDTAPSRIGECRTCPWWEGWEDRDGPVEGCRGRLVLSDDVSLVVGGGQVGPLRARGMRTVADLAEAGPDRPADWNGEPYSDAVLRARAHRDGEVVVPKVARPTIPRADVEVDVDLESHLDDGAYLWGTLLTLRDGRPLEDEGYRPFVTWSRLPDADEGRAFAEFWRWLTGIRDRAAGQGRSFRAYCYSRAAENGWLLSSAGRFGPEGTLAVVKGVPASPRCGASSPLHCGWMFTRPSPPSSSPRQAWVSRWSRRSPGSPGGIRGGR
SIO_010081: A6035_RS17875
subclass of: SO_0000673
so part of: A6035_RS17875
location: complement(31407..32285)
location: region:31407-32285:-1
so has part: feature:31407-32285:-1:exon

WP_244192623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31407-32285:-1:exon

A6035_RS18975
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS18975
so part of: sequence
location: complement(32425..32790)
location: region:32425-32790:-1
so has part: feature:32425-32790:-1:exon
subclass of: SO_0000010

position:32425:-1
position: 32425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32790:-1
position: 32790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32425-32790:-1:exon

A6035_RS18975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS18975
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRLLDWAPAPDPTLRVRRHPADLDRLVHAWRLLEAVGHAASSPVGAVLGLGSARAVVHDLEPVLDPADRTHATRLAVVRGELDTAPSRIGECRTCPWWEGVEDRDGPVEGVAAGWSCPMT
SIO_010081: A6035_RS18975
subclass of: SO_0000673
so part of: A6035_RS18975
location: complement(32425..32790)
location: region:32425-32790:-1
so has part: feature:32425-32790:-1:exon

WP_244192624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32425-32790:-1:exon

A6035_RS18980
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS18980
so part of: sequence
location: complement(32994..33278)
location: region:32994-33278:-1
so has part: feature:32994-33278:-1:exon
subclass of: SO_0000010

position:32994:-1
position: 32994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33278:-1
position: 33278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32994-33278:-1:exon

A6035_RS18980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS18980
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEDAERTTGRVPDAAVVGPASGARCLHRVARERDARPGWWRTAPLDEGVRLRAHGGGGSPRGVEGARAGGRAPRRPRWWTWWGTTGRICRGTYR
SIO_010081: A6035_RS18980
subclass of: SO_0000673
so part of: A6035_RS18980
location: complement(32994..33278)
location: region:32994-33278:-1
so has part: feature:32994-33278:-1:exon

WP_244192625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32994-33278:-1:exon

A6035_RS18985
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS18985
so part of: sequence
location: 33360..33842
location: region:33360-33842:1
so has part: feature:33360-33842:1:exon
subclass of: SO_0000010

position:33360:1
position: 33360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33842:1
position: 33842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33360-33842:1:exon

A6035_RS18985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS18985
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIATREGSTPMGKLTTYRDKRAGLRAHAAALKSTAMTEAKLAAKETRKQAREAHRVELAEAKKRAKLEGKNADRKAKREEKRAEKQNKLDRKAAKRDRKAEKVHAKEERKTIKREAKILATGSSPRRSTPPAASTSTSWPRWSSTSSRAPSWARTTCNVG
SIO_010081: A6035_RS18985
subclass of: SO_0000673
so part of: A6035_RS18985
location: 33360..33842
location: region:33360-33842:1
so has part: feature:33360-33842:1:exon

WP_244192626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33360-33842:1:exon

A6035_RS19275
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS19275
pseudo: true
so part of: sequence
location: 33782..>34162
location: region:33782-34162:1
so has part: feature:33782-34162:1:exon
subclass of: SO_0000010

position:33782:1
position: 33782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34162:1
position: 34162
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33782-34162:1:exon

A6035_RS19275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS19275
inference: COORDINATES: protein motif:HMM:NF040114.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF6474 family protein
SIO_010081: A6035_RS19275
subclass of: SO_0000673
so part of: A6035_RS19275
location: 33782..>34162
location: region:33782-34162:1
so has part: feature:33782-34162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33782-34162:1:exon

A6035_RS19280
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS19280
so part of: sequence
location: 34302..34472
location: region:34302-34472:1
so has part: feature:34302-34472:1:exon
subclass of: SO_0000010

position:34302:1
position: 34302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34472:1
position: 34472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34302-34472:1:exon

A6035_RS19280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS19280
inference: COORDINATES: protein motif:HMM:NF016149.2
GO component: GO:0042597 - periplasmic space [Evidence IEA]
GO function: GO:0005507 - copper ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper resistance protein CopC
translation: MLAPVAAAHSVLISVDPEDGSQLDTAPEQIVLIFNEEVNQTSPPSPSPPVMTGPIA
SIO_010081: A6035_RS19280
subclass of: SO_0000673
so part of: A6035_RS19280
location: 34302..34472
location: region:34302-34472:1
so has part: feature:34302-34472:1:exon

WP_279629914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34302-34472:1:exon

A6035_RS19285
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS19285
pseudo: true
so part of: sequence
location: <34451..35251
location: region:34451-35251:1
so has part: feature:34451-35251:1:exon
subclass of: SO_0000010

position:34451:1
position: 34451
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:35251:1
position: 35251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34451-35251:1:exon

A6035_RS19285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS19285
inference: COORDINATES: protein motif:HMM:NF016149.2
GO component: GO:0042597 - periplasmic space [Evidence IEA]
GO function: GO:0005507 - copper ion binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: copper resistance protein CopC
SIO_010081: A6035_RS19285
subclass of: SO_0000673
so part of: A6035_RS19285
location: <34451..35251
location: region:34451-35251:1
so has part: feature:34451-35251:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34451-35251:1:exon

A6035_RS17895
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17895
old locus tag: A6035_17585
so part of: sequence
location: 35215..35418
location: region:35215-35418:1
so has part: feature:35215-35418:1:exon
subclass of: SO_0000010

position:35215:1
position: 35215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35418:1
position: 35418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35215-35418:1:exon

A6035_RS17895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17895
old locus tag: A6035_17585
inference: COORDINATES: protein motif:HMM:NF028358.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: neutral/alkaline non-lysosomal ceramidase C-terminal domain-containing protein
translation: MRVHDDGDWSTIIVFEGLLTVTNALITWDIPPGTPAGEYRVVYTASGRGLDGRLFPVRGESRAFDVR
SIO_010081: A6035_RS17895
subclass of: SO_0000673
so part of: A6035_RS17895
location: 35215..35418
location: region:35215-35418:1
so has part: feature:35215-35418:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35215-35418:1:exon

A6035_RS17900
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17900
old locus tag: A6035_17590
so part of: sequence
location: 35480..36247
location: region:35480-36247:1
so has part: feature:35480-36247:1:exon
subclass of: SO_0000010

position:35480:1
position: 35480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36247:1
position: 36247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35480-36247:1:exon

A6035_RS17900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17900
old locus tag: A6035_17590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011596523.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MDIKGASVIVTGAASGLGNATARSFAEKGAVVFGLDLQQSIDKAVEQGIDEGITLIAADVTSEDDVKAAIARATEAAPLRVVVNCAGIAPAARIVSKKGVHALDLFETCISVNLVGTFNVLRLAAEAMSTQDTVDEDGQRGVIINTASVAAYEGQVGQIAYAASKGGVYSMGICAARDLAQFGIRVNTIAPGTIETPMLKGLTEEFQKSLEAAIPFPSRLGRPSDYAQLANAIVEHDYLNGESFRMDGALRMAPR
SIO_010081: A6035_RS17900
subclass of: SO_0000673
so part of: A6035_RS17900
location: 35480..36247
location: region:35480-36247:1
so has part: feature:35480-36247:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35480-36247:1:exon

A6035_RS17905
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17905
pseudo: true
so part of: sequence
location: <36379..36504
location: region:36379-36504:1
so has part: feature:36379-36504:1:exon
subclass of: SO_0000010

position:36379:1
position: 36379
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:36504:1
position: 36504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36379-36504:1:exon

A6035_RS17905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011596523.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 3-hydroxyacyl-CoA dehydrogenase
SIO_010081: A6035_RS17905
subclass of: SO_0000673
so part of: A6035_RS17905
location: <36379..36504
location: region:36379-36504:1
so has part: feature:36379-36504:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36379-36504:1:exon

A6035_RS17910
type: Gene
subclass of: SO_0000704
RO_0002162: 546160
locus tag: A6035_RS17910
old locus tag: A6035_17595
so part of: sequence
location: complement(36626..37258)
location: region:36626-37258:-1
so has part: feature:36626-37258:-1:exon
subclass of: SO_0000010

position:36626:-1
position: 36626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37258:-1
position: 37258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36626-37258:-1:exon

A6035_RS17910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 546160
locus tag: A6035_RS17910
old locus tag: A6035_17595
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTFTTRKAAAVAAAAALTMAGLPGVAGAQTGGLDSGSLGLVSDSLEGGSLEIFPEDNATGEGSLDTSGSTLLGEPTTGSFAPLTGSLADNGSVDVLTPAEGTGSVDTSGSALIGEPTTGSLAPLYAPVAGSLGIGDGATTVIEDPAVLIPVVLVGATVAAAVTFAPQIQQALLDAGIVLPPLPGLPAPAGAPAPAPAPPAPGPAIDNGRG
SIO_010081: A6035_RS17910
subclass of: SO_0000673
so part of: A6035_RS17910
location: complement(36626..37258)
location: region:36626-37258:-1
so has part: feature:36626-37258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36626-37258:-1:exon