Treponema paraluiscuniculi Cuniculi A, complete sequence.
type: Entry
definition: Treponema paraluiscuniculi Cuniculi A, complete sequence.
sequence version: NC_015714.1
sequence date: 2023-03-12
sequence: sequence
division: CON
label: NC_015714.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02603006
keyword: RefSeq
source: Treponema paraluiscuniculi Cuniculi A
organism: Treponema paraluiscuniculi Cuniculi A
taxonomy: Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Treponemataceae; Treponema.
reference: 1
references: 21655244
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP002103.1.\nSource DNA was obtained from Steven J. Norris,\nSteven.J.Norris@uth.tmc.edu, Department of Pathology and Laboratory\nMedicine, University of Texas Medical School at Houston, 6431\nFannin Street, Houston, TX, 77030, USA.\nThe original source of T. paraluiscuniculi Cuniculi A was obtained\nfrom Sheila A. Lukerhart, lukehart@u.washington.edu, Department of\nMedicine, University of Washington, Harborview Medical Center, 325\nNinth Avenue, Seattle, Washington 98104, USA.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/12/2023 11:09:19\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,036\nCDSs (total) :: 982\nGenes (coding) :: 966\nCDSs (with protein) :: 966\nGenes (RNA) :: 54\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 45\nncRNAs :: 3\nPseudo Genes (total) :: 16\nCDSs (without protein) :: 16\nPseudo Genes (ambiguous residues) :: 0 of 16\nPseudo Genes (frameshifted) :: 9 of 16\nPseudo Genes (incomplete) :: 8 of 16\nPseudo Genes (internal stop) :: 0 of 16\nPseudo Genes (multiple problems) :: 1 of 16\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000340
sequence length: 1133390
topology: circular
so has quality: SO_0000988
location: 1..1133390
location: region:1-1133390:1
RO_0002162: 545776

NC_015714
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02603006
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Treponema paraluiscuniculi, strain Cuniculi A: the loss of infectivity to humans is associated with genome decay
author: Smajs, D.
author: Zobanikova, M.
author: Strouhal, M.
author: Cejkova, D.
author: Dugan-Rocha, S.
author: Pospisilova, P.
author: Norris, S.J.
author: Albert, T.
author: Qin, X.
author: Hallsworth-Pepin, K.
author: Buhay, C.
author: Muzny, D.M.
author: Chen, L.
author: Gibbs, R.A.
author: Weinstock, G.M.
journal: PLoS One 6 (5), e20415 (2011)
pubmed: 21655244

21655244
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Smajs, D.
author: Strouhal, M.
author: Zobanikova, M.
author: Cejkova, D.
author: Dugan-Rocha, S.
author: Pospisilova, P.
author: Norris, S.J.
author: Albert, T.
author: Qin, X.
author: Hallsworth-Pepin, K.
author: Buhay, C.
author: Chen, L.
author: Muzny, D.M.
author: Gibbs, R.A.
author: Weinstock, G.M.
journal: Submitted (16-JUL-2010) Human Genome Sequencing Center, Baylor College of Medicine, 1 Baylor Plaza, Houston, TX 77030, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1133390:1
position: 1133390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1133390:1:source
so part of: sequence
organism: Treponema paraluiscuniculi Cuniculi A
mol type: genomic DNA
strain: Cuniculi A

545776
type: Taxonomy
SIO_000068: taxonomy

TPCCA_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: dnaA
locus tag: TPCCA_RS00015
old locus tag: TPCCA_0001
so part of: sequence
location: 4..1398
location: region:4-1398:1
so has part: feature:4-1398:1:exon
subclass of: SO_0000010

position:4:1
position: 4
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1398:1
position: 1398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4-1398:1:exon

TPCCA_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: dnaA
locus tag: TPCCA_RS00015
old locus tag: TPCCA_0001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881451.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosomal replication initiator protein DnaA
translation: MDAAGYEVFWNETLSQIRSESTEAEFNMWFAHLFFIASFENAIEIAVPSDFFRIQFSQKYQEKLERKFLELSGHPIKLLFAVKKGTPHGNTAPPKHVHTYLEKNSPAEVPSKKSFHPDLNRDYTFENFVSGEETKFSHSAAISVSKNPGTSYNPLLIYGGVGLGKTHLMQAIGHEIYKTTDLNVIYVTAENFGNEFISTLLNKKTQDFKKKYRYTADVLLIDDIHFFENKDGLQEELFYTFNELFEKKKQIIFTCDRPVQELKNLSSRLRSRCSRGLSTDLNMPCFETRCAILIKKIQNYNSIYPHKAIHISDDVVRLVSENISSNIRDLEGALTKIIAFIEVSGSITIDIVPSLLKEFFLSARPKHITVETILHVVADHFNISYSDLKGKKRNKSVVYPRQIAMFLSKELTELSTTELGIEFGGRDHSTVIYGCQKIEGEILTNPSLQANLDLLKSKVQDSIR
SIO_010081: TPCCA_RS00015
subclass of: SO_0000673
so part of: TPCCA_RS00015
location: 4..1398
location: region:4-1398:1
so has part: feature:4-1398:1:exon

WP_013944725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4-1398:1:exon

TPCCA_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: dnaN
locus tag: TPCCA_RS00020
old locus tag: TPCCA_0002
so part of: sequence
location: 1642..2757
location: region:1642-2757:1
so has part: feature:1642-2757:1:exon
subclass of: SO_0000010

position:1642:1
position: 1642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2757:1
position: 2757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1642-2757:1:exon

TPCCA_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: dnaN
locus tag: TPCCA_RS00020
old locus tag: TPCCA_0002
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944726.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MKILCEKEAFLKEINTAQEVISNKKNTSIFSNVLLAAQGALLTIRATDTKVTFETSIPVNVLAEGTTTVFCDKLVNVVSVLPTKEIELTLCEEQLVITPPNKKISFQLRTLSHESFPCFPQNEGGVSLAVPTSDLRNMINHTVFAVSEDSTRHFINGVHVDFQYGNIICVSTDGKRLAYIEKKGESSPQSFSGVIVPTKILGIVNRKLTPEGSVTLCITSQHVYFFFGGYKFSSVLIEGQFPNYKRVIPDHQERSFCVGRVELMEALKRVSLLVEQKSHRIFITIQQGLLTLSSKAHTQENEIGDAQEEIACAYTGESEIIALNYLYLEEPLKVFTSKEVQVEFTDPAKALTLRAVPNTDCFHIIMPMQTE
SIO_010081: TPCCA_RS00020
subclass of: SO_0000673
so part of: TPCCA_RS00020
location: 1642..2757
location: region:1642-2757:1
so has part: feature:1642-2757:1:exon

WP_013944726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1642-2757:1:exon

TPCCA_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00025
old locus tag: TPCCA_0003
so part of: sequence
location: 2702..3835
location: region:2702-3835:1
so has part: feature:2702-3835:1:exon
subclass of: SO_0000010

position:2702:1
position: 2702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3835:1
position: 3835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2702-3835:1:exon

TPCCA_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00025
old locus tag: TPCCA_0003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342226.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA replication/repair protein RecF
translation: MLYQTRTAFTSLCLCKRSDSLPFLTVTAINFRNLAHHTIDISSPEVFFVGNNGQGKTNILEVLYLAAYGNSFRTRTESELYATHACSNEYRVKVMYRGEYTHTVQIFSKNGKKRIEKNLKKIRTKKELISSIPCILFFHNDLDFVVGTPERRRFFLDQSLSMCNPLYLEYLQKYHALTKTKNREIKEKRVQLLDALDTQIATVGFDLVQWRTQLVRDFNVIFTKYYERLGDLAQVRIEYKPSWSDSSVEEIVHSLYKRRKHDLAMGMSMSGPHRDKIHFTRSQALFIPQASTGQRRLVSLVLRMSQAVFYTGVTGKLPVLLMDDVLLELDPEKRERFMMSLPPYDQLFCTFLPGEAYRRYGREKTRVYFVSEGECHE
SIO_010081: TPCCA_RS00025
subclass of: SO_0000673
so part of: TPCCA_RS00025
location: 2702..3835
location: region:2702-3835:1
so has part: feature:2702-3835:1:exon

WP_013944727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2702-3835:1:exon

TPCCA_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00030
old locus tag: TPCCA_0004
so part of: sequence
location: 3828..4265
location: region:3828-4265:1
so has part: feature:3828-4265:1:exon
subclass of: SO_0000010

position:3828:1
position: 3828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4265:1
position: 4265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3828-4265:1:exon

TPCCA_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00030
old locus tag: TPCCA_0004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881454.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF721 domain-containing protein
translation: MNNGVNKLSDLLVLTTEYIQASYETEAFDAHREWVCIVGNPVALHSTLVDIRNGKVVVKVTHPGWAQYLLLKKDEIVHALRRRYPSLGVTGMSTYVDSTSCTPSAKKNMQGLSVSEKQTRPVSELAEVFEQLRTLFQVKTEEPSH
SIO_010081: TPCCA_RS00030
subclass of: SO_0000673
so part of: TPCCA_RS00030
location: 3828..4265
location: region:3828-4265:1
so has part: feature:3828-4265:1:exon

WP_013944728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3828-4265:1:exon

TPCCA_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: gyrA
locus tag: TPCCA_RS00035
old locus tag: TPCCA_0005
so part of: sequence
location: 4392..6833
location: region:4392-6833:1
so has part: feature:4392-6833:1:exon
subclass of: SO_0000010

position:4392:1
position: 4392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6833:1
position: 6833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4392-6833:1:exon

TPCCA_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: gyrA
locus tag: TPCCA_RS00035
old locus tag: TPCCA_0005
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342227.1
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit A
translation: MEEISTPEGGVLVPISIEKEVKRAYIDYSMSVIVSRALPDVRDGLKPVHRRILYAMEEKGLRFSGPTRKCAKIVGDVLGSFHPHGDASVYDALVRLGQDFSLRYPVIHPQGNFGTIGGDPPAAYRYTEAKMARIAESMVEDIKKETVSFVPNFDDSDVEPAVLPGRFPFLLANGSSGIAVGMTTNMPPHNLREIAAAISAYIENPNLSIQELCDCINGPDFPTGGIIFGKNGIRQSYETGRGKIVVRARFTIETDSKGRDTIIFTEVPYQVNTTMLVMRIGELARAKVIEGIANVNDETSDRTGLRIVVELKKGTPAQVVLNHLFAKTPLQSSFNVINLALVEGRPRMLTLKDLVRYFVEHRVDVVTRRAHFELRKAQERIHLVRALIRALDAIDKIITLIRHSQNTELAKQRLREQFDFDNVQAQAIVDMQMKRLTGLEVESLRTELKDLTELISSLEELLTSPQKVLGVVKKETRDIADMFGDDRRTDIVNNEIEYLDVEDFIQKEEMVILISHLGYIKRVPVSAYRNQNRGGKGSSSANLAAHDFISQIFTASTHDYVMFVTSRGRAYWLKVYGIPESGRANRGSHIKSLLMVATDEEITAIVSLREFSNKSYVFMATARGVVKKVTTDNFVNAKTRGIIALKLSGGDTLVSAVLVQDEDEVMLITRQGKALRMSGREVREMGRNSSGVIGIKLTSEDLVAGVLRVSEQRKVLIMTENGYGKRVSFSEFSVHGRGTAGQKIYTQTDRKGAVIGALAVLDTDECMCITGQGKTIRVDVCAISVLGRGAQGVRVLDIEPSDLVVGLSCVMQG
SIO_010081: TPCCA_RS00035
subclass of: SO_0000673
so part of: TPCCA_RS00035
location: 4392..6833
location: region:4392-6833:1
so has part: feature:4392-6833:1:exon

WP_013944729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4392-6833:1:exon

TPCCA_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00045
old locus tag: TPCCA_0006
so part of: sequence
location: 7009..8262
location: region:7009-8262:1
so has part: feature:7009-8262:1:exon
subclass of: SO_0000010

position:7009:1
position: 7009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8262:1
position: 8262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7009-8262:1:exon

TPCCA_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00045
old locus tag: TPCCA_0006
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505380.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3798 domain-containing protein
translation: MCIGTRVRFSFCGIAGVCLLALGFLVSCSLQSSRSATKKSEARRTSYRIGLMTSTGSQSVDDVLAKTRLVSIYGEARGETGGRIVHVTYSDNFSHDHEATVSKLLALAEDSTIKAIVVSQAVPGVSKAFRIIKSKRPDVLLFAREPLEPVEMVQESADIVVSQDYLFGGYAVPWVAERMGARTLVHVSFPRHMSYPGLRVRRTVMRAACTDLGLSFAHEEAPDPVDGVSDGELEDFFHKTVVKWIKKYGKETLFYCTNDAHNRPLISALLKYGGMLIGATIFDYADALGVHYAELEDVYKIRKKVEKSLVAFGAEGRFGLNLNAQAFTVTMGFVEYARKIIDGEPRKDDMREALAESFDLFTRDAHWRIAPYLRLKTHEIVPNHVLVYTDTHVLGKFTLPVTDQVLPEGYWALTAKE
SIO_010081: TPCCA_RS00045
subclass of: SO_0000673
so part of: TPCCA_RS00045
location: 7009..8262
location: region:7009-8262:1
so has part: feature:7009-8262:1:exon

WP_013944731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7009-8262:1:exon

TPCCA_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00050
old locus tag: TPCCA_0009
so part of: sequence
location: complement(8342..9829)
location: region:8342-9829:-1
so has part: feature:8342-9829:-1:exon
subclass of: SO_0000010

position:8342:-1
position: 8342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9829:-1
position: 9829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8342-9829:-1:exon

TPCCA_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00050
old locus tag: TPCCA_0009
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342708.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: major outer sheath N-terminal domain-containing protein
translation: MYAEILLRNLECALPLGSLSGETLGELTPTEKQSFSVEATLRFYGAYLTIGKNPTFSKNFAKLWPLFITTRYKEADTQYAPGFGDYGGKIGYRVEDVGNSGLGFDFGFLSFASNGDWSTSGTSHSKYGFGSDLSLWYKRNKKLFLTVELAGNATLQEGYATLDSRFLGAPNNKRAPHALLWSVGGRLSIMPGAGFRFILATDAGNTYRDTNSARARVVEQALKFAEKTYPSLRTVRRIFSWMVQHVDSLGIDALVTAQWRWLSGGVYGATGAASVFGSSPFVNSTFQYTDFAAFLRLETRSGDDYTHALHGLNAGIEARVYLPLTYKSYLDNGGLPPDVVPARGVAQQVANIFEAGLRNIFGFFNRAVNFVARAAGLPADAITTGAASIALPIMGNAWVGYRIPCYDSMWIEPRAHIYMATNRFNFNGFKGTHNLKGELCFQYAVELRASPIKHVEFSVRWEQGLLSQDPYMLIEENWSWPGYTGSLFLECKITW
SIO_010081: TPCCA_RS00050
subclass of: SO_0000673
so part of: TPCCA_RS00050
location: complement(8342..9829)
location: region:8342-9829:-1
so has part: feature:8342-9829:-1:exon

WP_245522131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8342-9829:-1:exon

TPCCA_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00055
old locus tag: TPCCA_0011
so part of: sequence
location: 10443..12425
location: region:10443-12425:1
so has part: feature:10443-12425:1:exon
subclass of: SO_0000010

position:10443:1
position: 10443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12425:1
position: 12425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10443-12425:1:exon

TPCCA_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00055
old locus tag: TPCCA_0011
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944733.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: major outer sheath C-terminal domain-containing protein
translation: MGACISVYARFALGCGVFFLHGAVLDGVSRAFSSSAAFSGSAELSWGVVFDAEGASPVTAGKSIRHGFRTKSSWKLAFPLLPKKGATYTSFSGEDPIWVELSLKGLKVDFESALGSGTADPSMTTRSPFLKSRRSDFSLEATLHLYDVSFSVGKDPVFPSNFAQLWTPFITTSYESRSVKYAPGFGGVGGKIAYQARNISNSGITFNCALSFSSNGIWKSAPSVTSKVKGKGTNSRRMPADPHSKYGLGTEFTLVYARKGREQVRLEAASCATLSAGYRTGPDQTHHQNKDTVLWNVGARLTLSPGAGFKIVCAFDAGTPYKKGAARESLAETLAAQRGCNRFDTALMHALGLLVAAAKTRNELAAQMRSQSPPGVWEKFEQAVQSLPPITQGKPGVVGAEVRPGTMWMELSPVRKALVDVLSVLEQGGFDRVAFDALLIVQWRWISLGAYVASAPTNVFGSMLFPRGSSDHFDCAAFVRVESKWYDSLSKLVSGLSGGVEARLYIPFTHGLYLEPGSCTPNSTRGKKPQAFVLPPPGVVHPGAHSALPVVGKLWLNYRITLAAHAWIRPMVSLYGATYGAQGFSYGPGGAAGTVKRSRTFRAGKNLYYQVGVAVSPFERCELLIEWSQGMLARRPYISLEHGSWPNKRSELVCSCKVLW
SIO_010081: TPCCA_RS00055
subclass of: SO_0000673
so part of: TPCCA_RS00055
location: 10443..12425
location: region:10443-12425:1
so has part: feature:10443-12425:1:exon

WP_013944733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10443-12425:1:exon

TPCCA_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00060
old locus tag: TPCCA_0013
so part of: sequence
location: 12591..13823
location: region:12591-13823:1
so has part: feature:12591-13823:1:exon
subclass of: SO_0000010

position:12591:1
position: 12591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13823:1
position: 13823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12591-13823:1:exon

TPCCA_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00060
old locus tag: TPCCA_0013
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342231.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3798 domain-containing protein
translation: MKSQFLSKVWVVCVGALLCRCGGARAPQNTGSAKAVEDYHIGVMTGPASHSSHDVVAAKRACAMYGAVGDGHRGCILHVTYPEDFVNRQDETVSRLLAFADDPLMGAIVVSEGIHGTAEAFNKIRAKRSDIMLFVGDPHEYPELIQKSADIVVSDDYAFGGYAIPWAAKKMGARTLVHVSFPLHLSNAELRTRRQVMEAVCADIGIEFASEEAPDPAGESGVEGARAFIGTHTKQWIGKYGKNTMFFCTNDTHRVSLMRELVSKDGMLLGANVFDCAEALGVEYTDDEDVSGILERVESAVEEKRLVGRFGVNVSSHIFVSTLGLAEYARRILQNELREKDMRVALSDAFSLFSKGTRWRVAPYTDLLTGKEVSNHVSVFSDIHILGKFSLPVTDQEFPEKYRSIRFGRQ
SIO_010081: TPCCA_RS00060
subclass of: SO_0000673
so part of: TPCCA_RS00060
location: 12591..13823
location: region:12591-13823:1
so has part: feature:12591-13823:1:exon

WP_013944734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12591-13823:1:exon

TPCCA_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: pheT
locus tag: TPCCA_RS00065
old locus tag: TPCCA_0015
so part of: sequence
location: 14014..15828
location: region:14014-15828:1
so has part: feature:14014-15828:1:exon
subclass of: SO_0000010

position:14014:1
position: 14014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15828:1
position: 15828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14014-15828:1:exon

TPCCA_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: pheT
locus tag: TPCCA_RS00065
old locus tag: TPCCA_0015
EC number: 6.1.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881464.1
GO component: GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylalanine--tRNA ligase subunit beta
translation: MPKISIHEALFFELLGERCDDDTLERRLRSAKAELECSSFSVREDKEGGSLSPGGEVCDPVQRTRGQASCVREGAFDARLLKIELNDTNRPDLWSTAGLARLLRVHAGGASRAAQYRAFLSDRCTVRDSYGRCVVVDARLQTIRPFIAGFVARGAGLSEVRLWDLIQTQERLASNFGRRRCTLSLGCYRAQDICWPLAYRAVLLAEVSFTPLGMSMPLSGEQILTQHPKGREYGHLLKDYSFVPLLVDARGEVLSLIPITNSASLGAVVTGDTELFIECSGTDMCAVLVAVNSLACDLSDMGMQIEPVQITYSFDTPWGRSVTTPFYFQEKREVAHEQIDRLLGMPLTVADITEAFARMDCAVQVKQGTYVVEPAAYRNDFLHAVDLIEEVMLGRTIDRFSPQVPRSFTVGRLSDLTLLTRKIKHLLVGFGYQEMIFHYLGSAREFCTRMRCTADDLIEIENPLTESYRFVRRSIIPCLLSAELKSAHALYPHRIFEIGKVAFCSPHGEHGTCTQQSLGFLNASQEASYNEVASLVSGLLYCLKLPYQVEEAQDPRFVLGRQASICVHGSRVGIFGEIHPQVLSNWDIRMPCFAGELDVGALLP
SIO_010081: TPCCA_RS00065
subclass of: SO_0000673
so part of: TPCCA_RS00065
location: 14014..15828
location: region:14014-15828:1
so has part: feature:14014-15828:1:exon

WP_013944735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14014-15828:1:exon

TPCCA_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00070
old locus tag: TPCCA_0016
so part of: sequence
location: 15806..18364
location: region:15806-18364:1
so has part: feature:15806-18364:1:exon
subclass of: SO_0000010

position:15806:1
position: 15806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18364:1
position: 18364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15806-18364:1:exon

TPCCA_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00070
old locus tag: TPCCA_0016
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505385.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lon protease family protein
translation: MLGPYCRSSLWRELSWQEVTGIVAPDTIAYLKARAQDHPFLLAHERACAAIRLGMRMYGDGYNICVIGASGTGKRTTLRYLLKDFVPRPEQMWDIAYAYNFVHPHEPQVLQFPAGEGMPFATALRRSVNAILNTARDIVKSDAFLRERRTLLADIETRECAELSRIEAELYTRGFRVRWHRKRGTYSFDLVPLLKGKDSSFEALHDLASRAKLSRCVVHELHARYRLSCDEVSSLLHTLRTARRAARRRLAQYYRARLRLIILEQMACIKKRVACYAPVFSTPPVSCAAEQTEREKTSSSRLIEVPHEFEEMRARIISYIERIQTDVQVRVQCLMSMRISALVKKRFFDRYTLNFVCVHTEHAGYVFTEHQPNLANLCGSIESKGNEGDTLENGHLRIRAGALHRAHAGVLIVQLEDLLAEEEAWTHLKRALRTKQLLLPAGSSQSQGMLRPEGVPLTCKLVLVGEPCSFERLSQEDSSFRELFKVCAEFDTSMPNSDKNQVALIAYLDRVVARYGTFSLDSSAYARLLAYAEELAESHTRLSTSFVQIADLVLESHAVAVDMHPDVSVITAHVVQEALNRRQYVCSRARERFQRMIACGELLVEVQGYRIGRINALAIEEHCGHSFGIVISLTAQASAGKEGVMNIEREAGLSGEIYDKAHLIITSLLREKCLSAFADAAFDPAVDDLGKGQDSFPLCLSAALCFEQSYHGIDGDSASAAEFLVLLSAIGRFPLRQDRAITGSVNQLGQVQAIGGVSEKISGFYDVCALNGLTGMQGVLIPKSSCAQLFLPERVQDAVRAGTFHVWAVCTIDDALELMVPDDLKEQGSAQLYQCVRARLRDFYVTVKGHCG
SIO_010081: TPCCA_RS00070
subclass of: SO_0000673
so part of: TPCCA_RS00070
location: 15806..18364
location: region:15806-18364:1
so has part: feature:15806-18364:1:exon

WP_245522132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15806-18364:1:exon

TPCCA_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00075
old locus tag: TPCCA_0017
so part of: sequence
location: 18489..19436
location: region:18489-19436:1
so has part: feature:18489-19436:1:exon
subclass of: SO_0000010

position:18489:1
position: 18489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19436:1
position: 19436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18489-19436:1:exon

TPCCA_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00075
old locus tag: TPCCA_0017
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881466.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVARSIRVELESALDLLKQGDLRQAHQDLQDLLQKELDNRDVLYALTGIRFWEDRMQRVHTISGGLSQGEYLVGQWGAFVAYMQKRGGVVEPVMYALRCCVFTYALRFYGSLITGDAREHPAEVYRKTGLCYKALGNYDAARECLEFAVSLEPDSSAILAELADAYALAGDERWSKLYFREALFKGASKLELNLLESDLIFSLIERVKSYGFSGVELLEWLPVYGTLEGVLTAKRELRAVEIGKLKQAIYSLENDLRNEKVSAERRLLRPRLINHFFWLVDHYVNVQEDKRNIDEVLLKIKLLDEAVYHRYVRIA
SIO_010081: TPCCA_RS00075
subclass of: SO_0000673
so part of: TPCCA_RS00075
location: 18489..19436
location: region:18489-19436:1
so has part: feature:18489-19436:1:exon

WP_010881466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18489-19436:1:exon

TPCCA_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: greA
locus tag: TPCCA_RS00080
old locus tag: TPCCA_0018
so part of: sequence
location: 19453..22134
location: region:19453-22134:1
so has part: feature:19453-22134:1:exon
subclass of: SO_0000010

position:19453:1
position: 19453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22134:1
position: 22134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19453-22134:1:exon

TPCCA_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: greA
locus tag: TPCCA_RS00080
old locus tag: TPCCA_0018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015026135.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription elongation factor GreA
translation: MSEHIEHDVREMLNEEKWTRATLTAYSAEKFKELDRIIAEAKRQSILDVLKGICDEHLAHSKNSIIALYISGIISLSKQLLDDSCLVTLLTIFGDNHKNQIVEHLCTRVLEYGESKLALRALGECYKTSGNEQLYDVWERLVRIDYEEAEITRVLADKYEQEGNKEKATEFYKKALYRFIARRQNAAIKEVWTKLVALIPDDVEFFYREQKKISEKLGEGRGSVLMQDVYVYYKENEDWTTCINILKHILEHDEKDVWARKEIIENFRCKYRGHSQLEEYLKISNISQSWRNVFEAINDFEKHISFDEGSFVFHRTWGVGRIAKVCNDELLIDFAKRRAHTMLLKMAISALQTLGKEHIWVLKSVLKRQDLAAKIKQDPEWALKVIITSFDNNCNLKKVKQELVPSLLSVGEWTSWSTKARKILKESTGFAANPSNIDFYTVRSCPVSLEEKLAVEFKAQKNFFARIDILNTFMDKADTDSDAFREMFDYFNTFLRAFSVVDGNVIAAYLVVTRVSTVLPHLNACRPHGFADLYAHIADPRLVYTEIKDKGLKWEFVNSVKNFVSNWSDEYVKLFPEVLSLEILRALMEEGYKEKALKVVEACFEYYADNRAAVIWLFKTVRDEPWFQELRITAEQRIIVLIHIVDITYREIANRRNTTENRKLNKQALSVLFGNDHLLEHFMLSHDVGTTTRLYTLISDIQGLDPKLKVHLRNKIIEKYKDFKFFDTEERVVSGRGLVVTAKMLNAKKKELQDLLDVRIPENSREIGRALELGDLRENAEYKAAREEQTRLNNMVTRLQEEIERAQVFDPTTVVAGRVSFGTVISLKNHTSGEDETYTILGPWESAPERGIISYMSPLGSNLLNRKTGEQLAFTVGEHEKVYEILSISAAEI
SIO_010081: TPCCA_RS00080
subclass of: SO_0000673
so part of: TPCCA_RS00080
location: 19453..22134
location: region:19453-22134:1
so has part: feature:19453-22134:1:exon

WP_013944737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19453-22134:1:exon

TPCCA_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00085
old locus tag: TPCCA_0020
so part of: sequence
location: 22170..24257
location: region:22170-24257:1
so has part: feature:22170-24257:1:exon
subclass of: SO_0000010

position:22170:1
position: 22170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24257:1
position: 24257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22170-24257:1:exon

TPCCA_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00085
old locus tag: TPCCA_0020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944738.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: vWA domain-containing protein
translation: MLFLMCLCAALFAQELVREQSVTKSADITVLLDTSGTILPYRSVVSGSVLKDIATRFVRLGDSFHIISFSATPRHEISQVIRSEFDLSQVVSRFMILHQLGLYSDFLTALDFARTHLRALPAAHEKILIVVSDGIFNPPARSAYKNYNKDQVKINLARAAADLRREQVRVFYIKLPFPQDIQIRDLDDNLLTDLQKTDDVQISAVGSFAEGQTRRPKLDTVGVVSDQTGGVADNHAVATHGREDGTVQGVVGSHVEVARTQDRRSNADPAKREGVRPSSEATDVSREFTEDLGIRVSPVDSDGSVRFSEKERTLPVLHFPRVLEVQGKYAECMFEVENSTDAPVLLHLERVIFDNGVETDIVSVQTESCAVASGARAMLRTTFLLPKRYHEEGTYQVTMRVQFADNVRVFPQVATAELRVSPLSFLGLVRRGIHGVLSPVGLTHAFGYVLDMVGLSRTGFGAVLLPLFALAIFLVLVSAVVCRSKRVLSRKSWRGSPRTENGCQGPGSMSDFRAHSVKEQRQDQERVYAGMERIVSQRKSDVQDRLSVSNAATAFGRDRVSFSPRVTRAEHGCSRSGMTEIFVFDQTRAIGKRNIHVMKAGTRLGVGGHKGDDFLIFLVPFPRRLAQVYFDGEVYHLAILKPKYFPYEESSVVHDCVGRVVTLVSDRGYHVPFTFRQYEDPAVRLNNLLTSIEYA
SIO_010081: TPCCA_RS00085
subclass of: SO_0000673
so part of: TPCCA_RS00085
location: 22170..24257
location: region:22170-24257:1
so has part: feature:22170-24257:1:exon

WP_245522133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22170-24257:1:exon

TPCCA_RS05160
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: ffs
locus tag: TPCCA_RS05160
old locus tag: TPCCA_nc0001
so part of: sequence
location: complement(24330..24424)
location: region:24330-24424:-1
so has part: feature:24330-24424:-1:exon
subclass of: SO_0000642

position:24330:-1
position: 24330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24424:-1
position: 24424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24330-24424:-1:exon

TPCCA_RS05160
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 545776
nc RNA class: SRP_RNA
gene: ffs
locus tag: TPCCA_RS05160
old locus tag: TPCCA_nc0001
product: signal recognition particle sRNA small type
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00169
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TPCCA_RS05160
subclass of: SO_0000673
so part of: TPCCA_RS05160
location: complement(24330..24424)
location: region:24330-24424:-1
so has part: feature:24330-24424:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24330-24424:-1:exon

TPCCA_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00090
old locus tag: TPCCA_t0001
so part of: sequence
location: complement(24426..24513)
location: region:24426-24513:-1
so has part: feature:24426-24513:-1:exon
subclass of: SO_0000663

position:24426:-1
position: 24426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24513:-1
position: 24513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24426-24513:-1:exon

TPCCA_RS00090
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS00090
old locus tag: TPCCA_t0001
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(24477..24479),aa:Ser,seq:gga)
SIO_010081: TPCCA_RS00090
subclass of: SO_0000673
so part of: TPCCA_RS00090
location: complement(24426..24513)
location: region:24426-24513:-1
so has part: feature:24426-24513:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24426-24513:-1:exon

TPCCA_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00095
old locus tag: TPCCA_t0002
so part of: sequence
location: complement(24570..24658)
location: region:24570-24658:-1
so has part: feature:24570-24658:-1:exon
subclass of: SO_0000663

position:24570:-1
position: 24570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24658:-1
position: 24658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24570-24658:-1:exon

TPCCA_RS00095
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS00095
old locus tag: TPCCA_t0002
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(24622..24624),aa:Ser,seq:cga)
SIO_010081: TPCCA_RS00095
subclass of: SO_0000673
so part of: TPCCA_RS00095
location: complement(24570..24658)
location: region:24570-24658:-1
so has part: feature:24570-24658:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24570-24658:-1:exon

TPCCA_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00100
old locus tag: TPCCA_t0003
so part of: sequence
location: complement(24716..24789)
location: region:24716-24789:-1
so has part: feature:24716-24789:-1:exon
subclass of: SO_0000663

position:24716:-1
position: 24716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24789:-1
position: 24789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24716-24789:-1:exon

TPCCA_RS00100
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS00100
old locus tag: TPCCA_t0003
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(24753..24755),aa:Arg,seq:gcg)
SIO_010081: TPCCA_RS00100
subclass of: SO_0000673
so part of: TPCCA_RS00100
location: complement(24716..24789)
location: region:24716-24789:-1
so has part: feature:24716-24789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24716-24789:-1:exon

TPCCA_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00105
old locus tag: TPCCA_t0004
so part of: sequence
location: complement(24821..24907)
location: region:24821-24907:-1
so has part: feature:24821-24907:-1:exon
subclass of: SO_0000663

position:24821:-1
position: 24821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24907:-1
position: 24907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24821-24907:-1:exon

TPCCA_RS00105
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS00105
old locus tag: TPCCA_t0004
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(24871..24873),aa:Ser,seq:gct)
SIO_010081: TPCCA_RS00105
subclass of: SO_0000673
so part of: TPCCA_RS00105
location: complement(24821..24907)
location: region:24821-24907:-1
so has part: feature:24821-24907:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24821-24907:-1:exon

TPCCA_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00110
old locus tag: TPCCA_t0005
so part of: sequence
location: complement(24948..25032)
location: region:24948-25032:-1
so has part: feature:24948-25032:-1:exon
subclass of: SO_0000663

position:24948:-1
position: 24948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25032:-1
position: 25032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24948-25032:-1:exon

TPCCA_RS00110
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS00110
old locus tag: TPCCA_t0005
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(24996..24998),aa:Ser,seq:tga)
SIO_010081: TPCCA_RS00110
subclass of: SO_0000673
so part of: TPCCA_RS00110
location: complement(24948..25032)
location: region:24948-25032:-1
so has part: feature:24948-25032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24948-25032:-1:exon

TPCCA_RS05455
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05455
pseudo: true
so part of: sequence
location: 25196..>25459
location: region:25196-25459:1
so has part: feature:25196-25459:1:exon
subclass of: SO_0000010

position:25196:1
position: 25196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25459:1
position: 25459
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25196-25459:1:exon

TPCCA_RS05455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881470.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: TPCCA_RS05455
subclass of: SO_0000673
so part of: TPCCA_RS05455
location: 25196..>25459
location: region:25196-25459:1
so has part: feature:25196-25459:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25196-25459:1:exon

TPCCA_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00115
old locus tag: TPCCA_0021
so part of: sequence
location: 25541..27586
location: region:25541-27586:1
so has part: feature:25541-27586:1:exon
subclass of: SO_0000010

position:25541:1
position: 25541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27586:1
position: 27586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25541-27586:1:exon

TPCCA_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00115
old locus tag: TPCCA_0021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342234.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPGEVTQAEVASVAQNGRVRQTPCYGINPLLQKALSTVAGLNLFLIPQKRMRPSAQLLTTDLMLCALYSFFTHGENLLKVDGTFRKKAFVMFQALFPVDPDVVSVALPAYLQRTGEERGTSRLLQEGRRVLEHLGLIVCESAQVHVQDKRWASFFSLTALERAVYLTVASTAILRKEVLVQRAQALRTLLCVLHPDAQYAPEDLTRVYRILVEEAAPSVAADFFSSLSLSKDTMLQKRKGALHDSSVFSMQSAITAIRTAQLFGLLCVKDGLCALNEALFKGQYTRGPGMVLSATAELTIFPDGDMQGVLPILSCAHVCSLQTVATFELNKKSCTTGFARGLTVQALAQALECKTGEQVPQNILSSFRQWYAQITALTLRRGFVMQVDSSQQAFFESGGPLHPLVRTRLAEGVYFFDECQECMLYQALARARLSYLCEPIDTATPLFRPGEQGARALHVPSFSFPVRSARGVSEESTRDFAHLGAFVLETPNVSCTHSAADTPSISEQTGGVAHVQSEEDVDPSTSGATGKYWDKAQWRKVQRMQRAVRLQRLKEFEAHLQQLKLDATEQTELRARLQRGLILDRMQLSSETIRRERTEASGVDFLGKYRLAECALRSGALLEIETSSGQSVHKIVGTVCAIEKCEEDALLHVCVHAELPPERVSIARASRIVLLKNSIFS
SIO_010081: TPCCA_RS00115
subclass of: SO_0000673
so part of: TPCCA_RS00115
location: 25541..27586
location: region:25541-27586:1
so has part: feature:25541-27586:1:exon

WP_144011664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25541-27586:1:exon

TPCCA_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00120
old locus tag: TPCCA_0023
so part of: sequence
location: 27647..28978
location: region:27647-28978:1
so has part: feature:27647-28978:1:exon
subclass of: SO_0000010

position:27647:1
position: 27647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28978:1
position: 28978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27647-28978:1:exon

TPCCA_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00120
old locus tag: TPCCA_0023
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342709.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium-dependent transporter
translation: MSRRKQGRELFNSHVGVVLSCVGAAMGLANVWLFPGRLVEFGGVTFLIPYFIFLFGLSRFGLMGEYAFGKTLRCGPVRAFARVCETHPSCSLRALRGSGWFPVGVLLATCSFYVVIIGWILRYVVLSCTNALAGTQAHDLFYQVAGTSANVPWTLAAIALTACVVSVGVQKGVERGNIIMMVLFYGVLAFITGYIFTLPNAWIGMRRMLAFQSSSLCNPRLWLYALGMSFFSLSLGGAAMVLYGSYMPDTVDIPRTAFQTVTLDFLASGMSALCLIPSAWVLGMDVSSGPEFLFVTITRVASQIPMGVMISVLFFLCVLCAALSSAIAMLEVILESFVHTCTVGRRTLTWSLALVVAFVSLPLNASMRVFETFTDIVVVILSPLSALMGSVMIFWVYGAERCRVAINRCARGPLGKWFTPYMRYVYLGLCVMIMVLGVMFGGF
SIO_010081: TPCCA_RS00120
subclass of: SO_0000673
so part of: TPCCA_RS00120
location: 27647..28978
location: region:27647-28978:1
so has part: feature:27647-28978:1:exon

WP_013944740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27647-28978:1:exon

TPCCA_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00125
old locus tag: TPCCA_0024
so part of: sequence
location: 29158..29868
location: region:29158-29868:1
so has part: feature:29158-29868:1:exon
subclass of: SO_0000010

position:29158:1
position: 29158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29868:1
position: 29868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29158-29868:1:exon

TPCCA_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00125
old locus tag: TPCCA_0024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944741.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrkA family potassium uptake protein
translation: MKRFALIGLGDFGLSMLKELLKLTNNIVLLDRDRTLVETYRSRVRIVRAIDVLDEFTLCKMIPQDINAAVVDLGVKIESSIMITTFLKKLEIADIVVKAYSAEQGHILSSVGATHVVLPDREAAKKVTPMIAFDLLFNFMPLSAQLAIAEMAVHEDYVGRTLREVDVRKNFSLNIIAIRKRDAEDFCFINDPEYCFEANDVLLVAGSHKDIYAQSQDKLAHTHSFSDCFKQWFLTS
SIO_010081: TPCCA_RS00125
subclass of: SO_0000673
so part of: TPCCA_RS00125
location: 29158..29868
location: region:29158-29868:1
so has part: feature:29158-29868:1:exon

WP_013944741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29158-29868:1:exon

TPCCA_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00130
old locus tag: TPCCA_0025
so part of: sequence
location: complement(29947..33018)
location: region:29947-33018:-1
so has part: feature:29947-33018:-1:exon
subclass of: SO_0000010

position:29947:-1
position: 29947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33018:-1
position: 33018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29947-33018:-1:exon

TPCCA_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00130
old locus tag: TPCCA_0025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944742.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: insulinase family protein
translation: MSTLLHGFEIIWRHSLAELSAVGVYARHKKTGLELYHILNEDPENLFAFCFMTAEEASTGVAHILEHSVLCGSQHYPLKDPFLILAKQSVKTFLNALTFPDKTVYPASSLVETDYFDVMSVYADAVFFPLIEEWTFKQEGHRFEFNEHNQLTLQGVVLNEMRGVYADFHTLVYKHATHATTRGSVYAHDSGGHPTVIPRLTYESFKAFHKKHYHPSNCKLFLYGNIPTEKQMAFIEDKCLSKFSARKALPPIPPIPAYQSPRTYTGYAPASEGMDLTRCAVLLSWLLPESDKAEQLMDVFLLEHVLLGHDAAPLAQALLESELGEDLYAYNGSHIDLKRMLFFVGMTGVQHTQVDALKACVFETLESLVAHGIPPQEVETALNALEFSNTEVRRSDGPFSLVLMQRSLRGWLHGAGPESSLRYIPALQALREKVHHHPHYVENLILTHLLRNPQYTVLSVHPDPDFSKKLDEQLEKYVQDFSRTLTQPAAARLRADQESLRVRQTTPDPEELLALLPHIKREQLPVPTPELSETMQFFGSVPVLVHELATNDITYLHLAIPADMLSVKEAQLLPLYAYALTGMGTETHHWSVVSAEIARLTGGFAARCIVAGDQGSEILPLLRGQNTLQRSDIVGRAWLVVSVKMLSRFIVQAISYVCAHVRSLSFTDTRRLKDILAQYKNDLDSAAMHSGHSIALAKANARVNAAKAVEELWTGVTQIRLVRALWTECTETVASPSLAAKLKALHEKLLTAGVIGCVCGTETSLHTALDALAKPLACFRAPLSTYFIHHTSAPTAHEQQIPSAHGVLFQEALQHMRTRNMLTLLPAPVQVGFAALSLAHPRLPLERRGVEQVFARYLSTEPFWEKIRTIGGAYGAFTLPDPVHGIFSSLTYRDPNPLHSLDVIFKTIEHLHADHKGTSSLFNQKTMERLIIGAYSTAVTPETPEHKSFASFLRFLNGTTETERIAAIEHILDARVTDMHLCTQLLWAQRTCAEAAVVSTATSVREAATLEPYFSKLEAEPPL
SIO_010081: TPCCA_RS00130
subclass of: SO_0000673
so part of: TPCCA_RS00130
location: complement(29947..33018)
location: region:29947-33018:-1
so has part: feature:29947-33018:-1:exon

WP_013944742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29947-33018:-1:exon

TPCCA_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00135
old locus tag: TPCCA_0026
so part of: sequence
location: complement(33047..34069)
location: region:33047-34069:-1
so has part: feature:33047-34069:-1:exon
subclass of: SO_0000010

position:33047:-1
position: 33047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34069:-1
position: 34069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33047-34069:-1:exon

TPCCA_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00135
old locus tag: TPCCA_0026
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881475.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor switch protein FliG
translation: MNRTEFPRGLIKATVREQDRGRTVYKKIAQFLSLIGEEQAALVLKQLEPAQIEAVVAELLTLKPLSPEEAREILREFSALCARVSPVTGGLRAAQSMLSKAFGEEKADLILKRAVPEAQPKPFEFLAALEASQLLPLLEGELPATKTLILSQLPPKSAAHYLSNISTEEKKDLIVRLAKLKHVNPQVLQVMSDSLHKKFAALHLSQRRDLDGHAVLAAILKKMERATEHSILHALAEKNPTLAARVRTHLFTLDDIPALPDTFLQKHLASCSEKTLAALINTNHPAFVQKILSNLSKNRAQLVRDEYDTFPPSAHDTRTITEHFLATLRSAGAQQHIASK
SIO_010081: TPCCA_RS00135
subclass of: SO_0000673
so part of: TPCCA_RS00135
location: complement(33047..34069)
location: region:33047-34069:-1
so has part: feature:33047-34069:-1:exon

WP_013944743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33047-34069:-1:exon

TPCCA_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00140
old locus tag: TPCCA_0027
so part of: sequence
location: 34190..35515
location: region:34190-35515:1
so has part: feature:34190-35515:1:exon
subclass of: SO_0000010

position:34190:1
position: 34190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35515:1
position: 35515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34190-35515:1:exon

TPCCA_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00140
old locus tag: TPCCA_0027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342235.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hemolysin family protein
translation: MALSLRFWCFSPSGELRVSVLSVSAAFGVLVVLLVLSMLFSAAETAFCALNTLRLRYLYEKRHARARVAMRILRRKNFYLAAVVIGNTLASSALSAVIALFARALFGIHAVGWSIGAGTVLTLLFGEIIPKSLALCRPNAVALHTARFLQWSTLMLTPFVQVFCMARSALLRLARVACHTPSLRVTDDDLHTVLYAGEADGTVTSRERALYQRILHSASLTARDIMTCRAQLIAVPRASSLAEAIACAQKMRVSRVPVYERSVDWIIGIFDVKKFLCSEEVDGRDLEECGTLMQHVSAPVFVFECTRLAYVQHKLRAHSRAVAIVLDEYGGTAGLVTKHNIYQAFFKSSTHEFPVNSTGPQVTRAGVRAYIFPGSLRLDEINDLLGTDFSSCTSETLAGLIMEYTGCIPDPGTTVVFGSWRCVVLQLHVRRIVRVRFEFQG
SIO_010081: TPCCA_RS00140
subclass of: SO_0000673
so part of: TPCCA_RS00140
location: 34190..35515
location: region:34190-35515:1
so has part: feature:34190-35515:1:exon

WP_245522134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34190-35515:1:exon

TPCCA_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00145
old locus tag: TPCCA_0028
so part of: sequence
location: 35472..36890
location: region:35472-36890:1
so has part: feature:35472-36890:1:exon
subclass of: SO_0000010

position:35472:1
position: 35472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36890:1
position: 36890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35472-36890:1:exon

TPCCA_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00145
old locus tag: TPCCA_0028
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944745.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hemolysin family protein
translation: MCAESYVFGLSFKDSREARVAYPFLVGLELMFLLVCSALCAGSESALSSVNQDDERKLKRHSTRCTQRLCWLLARREQLITTVIVQNTALNMVLSSVVTLGSMELWGAQSVWKALVAVTCVIILCGEMFPKALGARYSLGFLMWIAPFLQLSYWLLYPCACVSSALMHVLEGIFLPRHTTCLSREEIKTLIAVGAREGVISSTENQLFQRALQFKRIPLAHVMVPRTHFVSVFQDTPLSHVWDAFRTCSFSQLLVHDAAGIVWGFVHYWDIFGESKVLPSQSSDQMVSACVANTRAAVHRVGDLARELCCVPNVADLFSVLDMLSVSKQQMALVVDERGDGEGLVTMTDIMEVIFGSLAGVSEGVEGYTVHGSMVQRMSKPRVDFQMKSVGTHEILCSGTVPLEYFNEVLGTRLQSRVYHTVGGLLLERFGRLPTVGDELVIEGLRFKIRRVLDRYVVSALVDTRACRSSVG
SIO_010081: TPCCA_RS00145
subclass of: SO_0000673
so part of: TPCCA_RS00145
location: 35472..36890
location: region:35472-36890:1
so has part: feature:35472-36890:1:exon

WP_245522135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35472-36890:1:exon

TPCCA_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: murA
locus tag: TPCCA_RS00150
old locus tag: TPCCA_0029
so part of: sequence
location: 36999..38276
location: region:36999-38276:1
so has part: feature:36999-38276:1:exon
subclass of: SO_0000010

position:36999:1
position: 36999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38276:1
position: 38276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36999-38276:1:exon

TPCCA_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: murA
locus tag: TPCCA_RS00150
old locus tag: TPCCA_0029
EC number: 2.5.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881478.1
GO function: GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
translation: MSCYRVEGGFPVSGCIRVCGNKNAVLPCIAAAVLTQEPVLLQNVPDIEDVAVMLTIFRAFGGSVERRGNHEYMLHLPQLQTCEVPCEAAQKVRASILFAGPLLARGRKAVLPPPGGDVIGRRRLDTHFLALAALGAQVRLDGVFTFSANKLVGCDVFLDEASVTATENVLMASVLAEGVTVITNAASEPHVQDLCHLLNAMGARVSGIGSNVLTIEGVSALHGTTYTLGADFMEVGSLIGLAVVTRGALTISDVNVRDLRPLGFAFKKLGVIWSEQEHAVSVSASQDLRVNYDFGGMIPKIDDGPWPAFPPDLTSIMTVVATQVEGVILIHEKMFESRMFFVDKLITMGARIILCDPHRALVSGPSALHGSDLVSPDVRAGMAMVLAACCARGVSIIRNVYQIERGYERLVERLQAIGVRIWKEG
SIO_010081: TPCCA_RS00150
subclass of: SO_0000673
so part of: TPCCA_RS00150
location: 36999..38276
location: region:36999-38276:1
so has part: feature:36999-38276:1:exon

WP_041610016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36999-38276:1:exon

TPCCA_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: groL
locus tag: TPCCA_RS00155
old locus tag: TPCCA_0030
so part of: sequence
location: 38395..40029
location: region:38395-40029:1
so has part: feature:38395-40029:1:exon
subclass of: SO_0000010

position:38395:1
position: 38395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40029:1
position: 40029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38395-40029:1:exon

TPCCA_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: groL
locus tag: TPCCA_RS00155
old locus tag: TPCCA_0030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002670719.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chaperonin GroEL
translation: MAKQLLFNEEARKKLLSGVEQISSAVKVTLGPKGRNVLLEKGYGAPTVTKDGVSVAKEVELEDPFENMGAQLLKEVATKTNDVAGDGTTTATVLAYSMVREGLKAVAAGMTPLELKRGMDRAVAIAVDDIKQNSKGIKSNEEVAHVASVSANNDKEIGRILASAIEKVGNDGVIDVDEAQTMETVTEFVEGMQFDRGYISSYFVTDRDRMETVYENPYILIYDKSISTMKDLLPLLEKIAQTGRPLLIIAEDVEGEALATLVVNSLRGTLKTCAVKAPGFGDRRKEMLEDIAILSGGQVISEDLGLKLESADIALLGQAKSVKVDKENTTIIDGSGKSKDIKDRIEQIKKQIEASTSDYDSEKLKERLAKLSGGVAVIKIGAVTEVEMKEKKHRVEDALNATRAAIEEGIVAGGGLALIQAAAALEKADLSGLTPDEAVGFKIVRRALEEPIRQISENAGIDGAVVAEKAKEKRGIGFDASKMEWVDMIKVGIIDPAKVTRSALQNAASVSGLLLTTECAIAAIPEKSSSTPPAPDMGGMGGMY
SIO_010081: TPCCA_RS00155
subclass of: SO_0000673
so part of: TPCCA_RS00155
location: 38395..40029
location: region:38395-40029:1
so has part: feature:38395-40029:1:exon

WP_013944747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38395-40029:1:exon

TPCCA_RS05165
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05165
pseudo: true
so part of: sequence
location: 40093..>40368
location: region:40093-40368:1
so has part: feature:40093-40368:1:exon
subclass of: SO_0000010

position:40093:1
position: 40093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40368:1
position: 40368
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40093-40368:1:exon

TPCCA_RS05165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881480.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: TPCCA_RS05165
subclass of: SO_0000673
so part of: TPCCA_RS05165
location: 40093..>40368
location: region:40093-40368:1
so has part: feature:40093-40368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40093-40368:1:exon

TPCCA_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00160
old locus tag: TPCCA_0032
so part of: sequence
location: complement(40344..41168)
location: region:40344-41168:-1
so has part: feature:40344-41168:-1:exon
subclass of: SO_0000010

position:40344:-1
position: 40344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41168:-1
position: 41168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40344-41168:-1:exon

TPCCA_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00160
old locus tag: TPCCA_0032
EC number: 2.1.1.193
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881481.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (uracil(1498)-N(3))-methyltransferase
translation: MNIVLFEQEEVVHGCAVLSFRDSRFCHIRRVLKLSAGACFKAGIINGVKGSARISLATEKYLVAVFEKLEYEDCALFPLHLVIGFPRPIQLRRILRDVSSLGISSIHLVGTELGERSYLDSGLAHMEKMHTYLIRGLEQAGGTKLPLITVSESVRTFCSQHTHILGDSTHQKLILDTKNTLTDLGSAALRGDVLWIAIGSERGWTESERLLFSAMGFRAVDMGRRTLRTETAACAACAVVLANAHAWKRKIPRPGKRSSPISRKNPQIRITLKK
SIO_010081: TPCCA_RS00160
subclass of: SO_0000673
so part of: TPCCA_RS00160
location: complement(40344..41168)
location: region:40344-41168:-1
so has part: feature:40344-41168:-1:exon

WP_013944748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40344-41168:-1:exon

TPCCA_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00165
old locus tag: TPCCA_0033
so part of: sequence
location: complement(41165..41833)
location: region:41165-41833:-1
so has part: feature:41165-41833:-1:exon
subclass of: SO_0000010

position:41165:-1
position: 41165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41833:-1
position: 41833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41165-41833:-1:exon

TPCCA_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00165
old locus tag: TPCCA_0033
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944749.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1361 domain-containing protein
translation: MYSRLRRLFGIRGTGTLCAMSVFCLLLSFGRRCVAADNFLSFLVWNLVLAFIPWLISAILHVRRFAVRSVQLFLMLLWLLFFPNAPYILTDIIHLGKGKSFLLYYDLIILLAYSFTGLFYAFVSLHLIESILARDFHIKRPFIISVFELYLCAFGIYLGRFLRWNSWDIVLHGRTILSDIGIRVIRPVFYVDTWMFVFLFGTMLVLCYQSYRSFLTHTRNDK
SIO_010081: TPCCA_RS00165
subclass of: SO_0000673
so part of: TPCCA_RS00165
location: complement(41165..41833)
location: region:41165-41833:-1
so has part: feature:41165-41833:-1:exon

WP_013944749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41165-41833:-1:exon

TPCCA_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00170
old locus tag: TPCCA_0034
so part of: sequence
location: complement(41877..42833)
location: region:41877-42833:-1
so has part: feature:41877-42833:-1:exon
subclass of: SO_0000010

position:41877:-1
position: 41877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42833:-1
position: 42833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41877-42833:-1:exon

TPCCA_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00170
old locus tag: TPCCA_0034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881483.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter substrate-binding protein
translation: MQRCSVVAALAGVVFLAQACSLSTPSRITHTDKLPVVVTFNALKELTQMVGGEKIHLVSIVPDGVDSHDFEPKAKHMAFISDAKVIVYNGLGMEPWIHSVLHAARNSGSIRVEAAQGIVPLKAHTRGHTAHHAHAHAHASHGSAYDPHVWLSVCNAQTMLRTIGKALCKADPQHTRFYKRNTRNAAARLEALYKEYRSKFAALSHRYFVTTHAAFGYLCRDFDLQQKSIKDVFNTEEPSIKRLVELVEFSKKHSVRTIFSERGPSEKVARVLAQEIGASVETIYTMEKNEENLSYYERMKHNINRIYRACSKQVAPSQ
SIO_010081: TPCCA_RS00170
subclass of: SO_0000673
so part of: TPCCA_RS00170
location: complement(41877..42833)
location: region:41877-42833:-1
so has part: feature:41877-42833:-1:exon

WP_013944750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41877-42833:-1:exon

TPCCA_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00175
old locus tag: TPCCA_0035
so part of: sequence
location: 43031..43747
location: region:43031-43747:1
so has part: feature:43031-43747:1:exon
subclass of: SO_0000010

position:43031:1
position: 43031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43747:1
position: 43747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43031-43747:1:exon

TPCCA_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00175
old locus tag: TPCCA_0035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944752.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter ATP-binding protein
translation: MRIMASPFAVLLQNVSFRYTADARFILHEVDLAIPKGAYLSVVGENGSGKSTLVKLVLKLLKPSTGTIAHFVQRVGSVPQTKMHTLYFPLTVYEMLNSYRRLLRISHKWAVDAVLEEVGMRGAKKKLVYTLSGGELQKVYIARSLIGDPDLLVLDELSTGIDSRGQKDIYALLKGLNTSRNVTVISVEHNLDAAITNSTQIFHLSEGHGHLCNPQQYVSEFLDMQKKDALACAQCRSR
SIO_010081: TPCCA_RS00175
subclass of: SO_0000673
so part of: TPCCA_RS00175
location: 43031..43747
location: region:43031-43747:1
so has part: feature:43031-43747:1:exon

WP_013944752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43031-43747:1:exon

TPCCA_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00180
old locus tag: TPCCA_0036
so part of: sequence
location: 43747..44547
location: region:43747-44547:1
so has part: feature:43747-44547:1:exon
subclass of: SO_0000010

position:44547:1
position: 44547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43747-44547:1:exon

TPCCA_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00180
old locus tag: TPCCA_0036
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881485.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter permease
translation: MLQYAFMRNAFVASFLIALLCPLVGIHLVLRRYALMGDALAHGSLAGVSIAVSCGIHPGWGSFFFTALVGVLIEFLRAFFKNHHDLILSIVLSLSVGIAVTLLSSGLIQADIDSYLFGSILVVSTCDLWIMLALSVFCVGTLALRYHQLLYLAFDEETARICGVAADGINYVASVVISATIAASIKITGILVLSSLMTVPVATALQLRVGFLLTLVAAFLFSMLDTALGLVFSYYLNVAPGGFTALVSVVVLMLVIALTQVGRART
SIO_010081: TPCCA_RS00180
subclass of: SO_0000673
so part of: TPCCA_RS00180
location: 43747..44547
location: region:43747-44547:1
so has part: feature:43747-44547:1:exon

WP_013944753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43747-44547:1:exon

TPCCA_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00185
old locus tag: TPCCA_0037
so part of: sequence
location: complement(44656..45651)
location: region:44656-45651:-1
so has part: feature:44656-45651:-1:exon
subclass of: SO_0000010

position:44656:-1
position: 44656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45651:-1
position: 45651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44656-45651:-1:exon

TPCCA_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00185
old locus tag: TPCCA_0037
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944754.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-2-hydroxyacid dehydrogenase
translation: MRCVVFNLREEEAPYVEKWKQSHPGVVVDTYEEPLTAKNKELLKGYEGLVVMQFLAMEDEVYDYMGACKLKVLSTRTAGFDMYNATLLKKHGIRLTNVPSYSPNAIGEYALAAALQLTRHAREIETFVRKRDFRWQKPILSKELRCSRVGILGTGRIGQAAARLFKGVGAQVVGFDPYPNDAAKEWLTYVSMDELLSTSDVISLHMPATKDSHHLINAKTIAQMKDGVYLVNTARGAVIDSQALLDGLDKGKIAGAALDAYEFEGPYIPKDNGNNPITDTVYARLVAHERIIYTPHIAFYTETAIENMVFNSLDACTTVLRGDPCAAEIKL
SIO_010081: TPCCA_RS00185
subclass of: SO_0000673
so part of: TPCCA_RS00185
location: complement(44656..45651)
location: region:44656-45651:-1
so has part: feature:44656-45651:-1:exon

WP_013944754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44656-45651:-1:exon

TPCCA_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00190
old locus tag: TPCCA_0038
so part of: sequence
location: complement(45748..46767)
location: region:45748-46767:-1
so has part: feature:45748-46767:-1:exon
subclass of: SO_0000010

position:45748:-1
position: 45748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46767:-1
position: 46767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45748-46767:-1:exon

TPCCA_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00190
old locus tag: TPCCA_0038
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944755.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS transporter subunit IIC
translation: MMKILNGSSAGIVIGLVPAAIAGELFRALAPLSPLFAALYHVVLPIQFSVPALIGTLVGLQFHCSAPEVATLAFVSVIASGNVTLQNGAWLITGIGDVINVMLISALAIILVRALRGKLGSLTIIALPLIVAVVAGGVGSFSLPYIKMITFFVGRVIATFIALQPLLMSILLSMSFSLIIISPVSSVAVGIAVGLTGLASGAANIGVSSCAMTLIVGTMRVNKIGVPLAVFAGAMKMLMPNWIRYPILNIPLLLNGLVCGVLAWLFNLQGTPASAGFGFIGLVGPVNAYRLMAYTPMVRAGILFLVYFVLSFLAAYLIDFILVDRLKLYRRELFIPEQG
SIO_010081: TPCCA_RS00190
subclass of: SO_0000673
so part of: TPCCA_RS00190
location: complement(45748..46767)
location: region:45748-46767:-1
so has part: feature:45748-46767:-1:exon

WP_245522136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45748-46767:-1:exon

TPCCA_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00195
old locus tag: TPCCA_0039
so part of: sequence
location: 46813..47007
location: region:46813-47007:1
so has part: feature:46813-47007:1:exon
subclass of: SO_0000010

position:46813:1
position: 46813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47007:1
position: 47007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46813-47007:1:exon

TPCCA_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00195
old locus tag: TPCCA_0039
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MERLKMARTAASVRQENKPRQQFHFVLDEKALQSPLRENPSKNVRTIPDAGDENSSFGHARVIA
SIO_010081: TPCCA_RS00195
subclass of: SO_0000673
so part of: TPCCA_RS00195
location: 46813..47007
location: region:46813-47007:1
so has part: feature:46813-47007:1:exon

WP_193386069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46813-47007:1:exon

TPCCA_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00200
old locus tag: TPCCA_0040
so part of: sequence
location: 47061..49478
location: region:47061-49478:1
so has part: feature:47061-49478:1:exon
subclass of: SO_0000010

position:47061:1
position: 47061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49478:1
position: 49478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47061-49478:1:exon

TPCCA_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00200
old locus tag: TPCCA_0040
inference: COORDINATES: protein motif:HMM:NF012245.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MKYRAITYSYVFAFALSAAVSHTALPAPPSAKNGVLDLRQWDFSSGDALLSLSGTWGFHWNELLTHSAEQPAAFMTVPSLWTKPRGAVQIPAIQAYPHYGCATYTLKILLPPRAPSLALSCDTLNYAARIYANGHLLTELGTVARNRADAIPYVHPAEVWLPTHEPEIDVCIQVSNYHSLRPGIVGEVHLGSVSRVRTRVLRKDVLEAMTIGFAFTIFAYYLAMFCFRRLSSCSRKSYAENERADTAGVLGVSEKSLYVCSLFSLLIVVRLLLTGNALLPRLITIGWDPMVRLEYLTLAFSGVSCLYYLSTLYPGLVNQSFVVAFGAEGLAYAVIILLLPPASFARLLPLQQLFVLLLLGIVLWVMCKVLYRRKRGAVPLSMGVLVLGVTALHDVLLAVGVLSGAPLLIFGFVGFLVTQTALIEWQVVLDGRTAQRLSQDLSSSSQRLERLFGEVRRTAQEFSHNEQNLTETMDRAEQVVQDLTRYTGAVREELAVQGEGFSQTRVVNEELGSSLRELDEQMEAQGERAREALEAVERLGSTVHNLRGKFSAVHADFEAITTASKTGKECVGRMMEVIEEITSRSRGLAVTNALVVDISGRTNLLAMNAAIEAAHAGDAGRGFAVVAGEIRSLAARTAAESGATGKMLKEIEAVIGESGHASAGVAQSFTDIRGKVDGFSTILADISGAVQVVGEENERTVERMRTVTGQLCTAREQGKVIAEVCTRGAARAERLTRDAQKVCAEVETMIGNVEVLTEVVARTRAVELHTREVITRPEWALGQQYTNGRTSVGIQARGGVGGAYR
SIO_010081: TPCCA_RS00200
subclass of: SO_0000673
so part of: TPCCA_RS00200
location: 47061..49478
location: region:47061-49478:1
so has part: feature:47061-49478:1:exon

WP_245522137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47061-49478:1:exon

TPCCA_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00205
old locus tag: TPCCA_0042
so part of: sequence
location: 49599..50531
location: region:49599-50531:1
so has part: feature:49599-50531:1:exon
subclass of: SO_0000010

position:49599:1
position: 49599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50531:1
position: 50531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49599-50531:1:exon

TPCCA_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00205
old locus tag: TPCCA_0042
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944758.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysM peptidoglycan-binding domain-containing protein
translation: MSQEIGIKLADGSFFPLFAAEGVQRTTLELVTANDQQSRALLSFFKRVSPGDGEASVASAELEPMGALSIDALSVAAAGGATIRLEVECDGSRCRARATDVGSGAFQETSFSVLERSSGDVTPDEQPAAQIEHVSSFPEDEGGDGSTLTRRRRILLAVCAFLILLGGVLVGWVLYMHGASRPAVVPSQKVELPRSSTHVAARELERTAVEARVVDLPSETALPETHKEKDVPPASPGAETATSAAAEPVEESESGSVKVVRYTVKRGDTLWDLARSYYKTPWRYMRIAEFNRLKNPDHIVAGTSIEIPSR
SIO_010081: TPCCA_RS00205
subclass of: SO_0000673
so part of: TPCCA_RS00205
location: 49599..50531
location: region:49599-50531:1
so has part: feature:49599-50531:1:exon

WP_013944758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49599-50531:1:exon

TPCCA_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00210
old locus tag: TPCCA_0043
so part of: sequence
location: 50635..52644
location: region:50635-52644:1
so has part: feature:50635-52644:1:exon
subclass of: SO_0000010

position:50635:1
position: 50635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52644:1
position: 52644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50635-52644:1:exon

TPCCA_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00210
old locus tag: TPCCA_0043
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505391.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MCARGAREVDIPQFLRDKNYTPFLKPTDEFLEQVAAREGASYFIGLHLKRAKFSEEAHEYFVRGAAQAAPYRQLCAHEAHNTGSPLQRLAFIEKQLHVLNEGSDARTKTQQQTLRLLRSRVLFELERYYSLRTVVESWYNDRALAPHTSAQFAALIAALPDLPRIFKEVHGARVDVFHRNYKRGWERVRLLLRSSAWHTRYATNSVLSDFGKAALYGSENSVKAAQVFLDHLAHLSRSTLSNAELEARLRFYCYFYAARLYSRSASHKKQALPLFKKAEKVATRRQDADNALWYYLDVLRALDFDSFFKMLVESAPRWRSDSWFSDLVDYAIVQLTTQQDWGRLATLQEVLTHRALPERSARVTYVLARSGTLSEESARRAYRTIFETAHSSLYYRVLAACALGIPLEEALYKVRSKRTPHPFLTPDESRAILQGYVDYHLDDMFYQAMVQFYPDIPLHLAEHFADAHIQRSRWSDAVRIQSYAIRSHGARYSVEHLKIAYPRPWLDVIQGYAGKYHIEEYLLFALIRSESLFQPQVISRAGAVGLAQLMRPTASDIARKLNIDTYDLTDPDINVRFGSLFFSDLIRRFDGSVFCALFSYNAGPSRVRKWKKQRGSLPDDLFLETLPLAEPREYGRKILSAAVMYGYLYYQKQASDVVCALLPEFCRAS
SIO_010081: TPCCA_RS00210
subclass of: SO_0000673
so part of: TPCCA_RS00210
location: 50635..52644
location: region:50635-52644:1
so has part: feature:50635-52644:1:exon

WP_245522138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50635-52644:1:exon

TPCCA_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: mnmG
locus tag: TPCCA_RS00215
old locus tag: TPCCA_0044
so part of: sequence
location: 52684..54576
location: region:52684-54576:1
so has part: feature:52684-54576:1:exon
subclass of: SO_0000010

position:52684:1
position: 52684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54576:1
position: 54576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52684-54576:1:exon

TPCCA_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: mnmG
locus tag: TPCCA_RS00215
old locus tag: TPCCA_0044
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881493.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
translation: MGFRFSDYDVIVVGGGHAGAEAALAAARMGEHTLLITQTIDSIGRLSCNPSIGGISKGNIVREIDALGGEMGKFADACMIQYRLLNKSRGPAVQAPRIQADKFLYAQKVKHTLECTQHLHLYQDTVVDVVCSNTTDAGYVAYGAAHAVVTARGRHISARAVVLTTGTFMEGRVYIGEYEAPEGRLGEHAAEGLGAALRKKGFQMGRLKTGTPARVLRKSVDLSVMEKQEADAIMRPFSFAHVEINRPHADCYINYTNERTHQLIRENFHRSPFFSGRIKAVGTRYCPSIEDKVRKFPDRIRHQLYIEPEGLGTEELYINGLSSCLPEDIQDEMIRTIPGMERAVITRPAYAVDYAVLFPVQLGIDLQTKRVSGLFSAGQINGTSGYEEAGGQGIIAGINAALYARSTKTKEEYHPFVLKRDEAYIGVMIDDLVTQGIDEPYRMFTARAEYRLKLRHDTADERLTEKAYAIGLQKKSAVETLQKKMRTKHEILHLLQTNKVSLTHANAYVQLKPHIGKSFAATLRDPVIPLGLIASLNEQIARFPLEVFQSVGVEIRYEHYVAAQDQRIAQVEKMEGIKIPAHFDYARISGLSVESRTRLEHVRPDTIGQVGRMRGIRPSDVMLLLAHLKR
SIO_010081: TPCCA_RS00215
subclass of: SO_0000673
so part of: TPCCA_RS00215
location: 52684..54576
location: region:52684-54576:1
so has part: feature:52684-54576:1:exon

WP_013944760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52684-54576:1:exon

TPCCA_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00220
old locus tag: TPCCA_0045
so part of: sequence
location: complement(54632..55531)
location: region:54632-55531:-1
so has part: feature:54632-55531:-1:exon
subclass of: SO_0000010

position:54632:-1
position: 54632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55531:-1
position: 55531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54632-55531:-1:exon

TPCCA_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00220
old locus tag: TPCCA_0045
EC number: 3.5.4.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881494.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenosine deaminase
translation: MRSLEYYRSQPKADVHTHLNLSMKYERYKQWSGVVIPNFPRKMRGLDEMHEIIGEYTRPQCKTAQDVLNLFTMSIEDAIADNVVVMETSVDIGFVTHYEENLDHFLCDLSDLHRRYKRNVTLHFELGISKIRERSFVEQWAEPMMRSGIFENIDLYGPEISEGIEDFIYIFKLAEKYHLKKKAHVGEFSDAQSVRHFVEIFNLDEVQHGIGAATDENVLRFLAERKVRCNVCPTSNVMLNAVECLEKHPIKKMMDAGVRVGLGTDDLLFFGKTNSEQLFDMVSCGLITELHAEALLAVR
SIO_010081: TPCCA_RS00220
subclass of: SO_0000673
so part of: TPCCA_RS00220
location: complement(54632..55531)
location: region:54632-55531:-1
so has part: feature:54632-55531:-1:exon

WP_013944761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54632-55531:-1:exon

TPCCA_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00225
old locus tag: TPCCA_0046
so part of: sequence
location: complement(55893..56594)
location: region:55893-56594:-1
so has part: feature:55893-56594:-1:exon
subclass of: SO_0000010

position:55893:-1
position: 55893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56594:-1
position: 56594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55893-56594:-1:exon

TPCCA_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00225
old locus tag: TPCCA_0046
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944762.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stage 0 sporulation family protein
translation: MIPKLSPNADRCTACASTPAFPPQPMEEEGEFLYQLRLEYSREVLYARFHAALRVHTFVVVPTRYGNDIARCVGRIRTPVQTDIASVVRVASDQDLCTWHTHREKERAAEMIFRDRIEHYQLEMKCICCHYPLEEARVVFLYSAPARVDFRELVRDLGATFGTRVELRQINEREEARIVGGIDCCGRALCCCSVFSRLRPVSVKMVKEKNLLFRSTQMMGRCGRLRCCLTFEE
SIO_010081: TPCCA_RS00225
subclass of: SO_0000673
so part of: TPCCA_RS00225
location: complement(55893..56594)
location: region:55893-56594:-1
so has part: feature:55893-56594:-1:exon

WP_013944762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55893-56594:-1:exon

TPCCA_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00230
old locus tag: TPCCA_0047
so part of: sequence
location: complement(56612..57133)
location: region:56612-57133:-1
so has part: feature:56612-57133:-1:exon
subclass of: SO_0000010

position:56612:-1
position: 56612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57133:-1
position: 57133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56612-57133:-1:exon

TPCCA_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00230
old locus tag: TPCCA_0047
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881496.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YaaR family protein
translation: MGYRVGNSDSTSLLSAFAPPERAKKKSKEKRPLQAARFLSLLYPKTDPHSAVQDPSLVHEEHQTRLAYLQDRLCSTGDILKNTRTLETIAAYKQAVKEFVQYAIKHNYTTESKSSIRIDRGTGMPDTVIFTKIKVIDQKLASFVRELMSHQVDQLTVLQKTEEIYGMLVDLLI
SIO_010081: TPCCA_RS00230
subclass of: SO_0000673
so part of: TPCCA_RS00230
location: complement(56612..57133)
location: region:56612-57133:-1
so has part: feature:56612-57133:-1:exon

WP_010881496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56612-57133:-1:exon

TPCCA_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00235
old locus tag: TPCCA_0048
so part of: sequence
location: complement(57139..57570)
location: region:57139-57570:-1
so has part: feature:57139-57570:-1:exon
subclass of: SO_0000010

position:57139:-1
position: 57139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57570:-1
position: 57570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57139-57570:-1:exon

TPCCA_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00235
old locus tag: TPCCA_0048
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881497.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polymer-forming cytoskeletal protein
translation: MAKIERRSMNTLIGAGSRISGNVVVPGSVRIEGDVDGDVITTGHVVIGKRARVRGVIRVGSIIVGGMVEGDIVASEAVQVLPSGVILGAVLTRKIVVDEQAFLDGFCYAVADQEGFNKVLKAYLGRKSIHTSAFGYNKYSKSG
SIO_010081: TPCCA_RS00235
subclass of: SO_0000673
so part of: TPCCA_RS00235
location: complement(57139..57570)
location: region:57139-57570:-1
so has part: feature:57139-57570:-1:exon

WP_010881497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57139-57570:-1:exon

TPCCA_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00240
old locus tag: TPCCA_0049
so part of: sequence
location: complement(57592..58683)
location: region:57592-58683:-1
so has part: feature:57592-58683:-1:exon
subclass of: SO_0000010

position:57592:-1
position: 57592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58683:-1
position: 58683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57592-58683:-1:exon

TPCCA_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00240
old locus tag: TPCCA_0049
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342245.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MARIRRYKRIEYAFVRFCIDRCTRCARLVREAAARLGAAGRAELTVMLVPHSQCAARTFCTTARTLLCVLLCGVGVLASFFWFAHQSVTSARRLAAVRAEVDRTRVHLALLRQEAAELIRTSKAFQTSLSQTFSQVGLSGLQSGAEKPVRSVSDTNQSNEPDDASAKDGAQKGNVGVTEQHGKNVQGVGSEPQELRRIAAYFQNSVQPVREIGKLLNSQTALFSDIPSLWPIKGGVGHISMAFGKNRHPFTGQWYVHKGIDLSTHRSGDPIVATADGHVVTVEYDSGWGNYVIIKHKHGFYTRYAHMQSYTVTRGQHIRQGQIIGYIGATGVATGPHLHYEIHIGSDVVDPGKYLNVKTAGAG
SIO_010081: TPCCA_RS00240
subclass of: SO_0000673
so part of: TPCCA_RS00240
location: complement(57592..58683)
location: region:57592-58683:-1
so has part: feature:57592-58683:-1:exon

WP_013944763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57592-58683:-1:exon

TPCCA_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00245
old locus tag: TPCCA_0050
so part of: sequence
location: complement(58914..59522)
location: region:58914-59522:-1
so has part: feature:58914-59522:-1:exon
subclass of: SO_0000010

position:58914:-1
position: 58914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59522:-1
position: 59522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58914-59522:-1:exon

TPCCA_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00245
old locus tag: TPCCA_0050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944764.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosyltransferase
translation: MKKRFIPYNVIRDEGFSMARRIVADRFVPTVMYVPIRGGVYLGNVLNEYLTIAYKAEPPILYAAVVAHSHCDLRKRRVISVDGWTYPPEYLRVGDKVLIVDDIFDSGATINYIASLLMQKGLARGDIRVAVFNYKVFVGEKQPPVLPDYWCIKHEVRSEADNEWFHYMSHELSGLTAAELEQHYYAQNPALRKTLADINNQL
SIO_010081: TPCCA_RS00245
subclass of: SO_0000673
so part of: TPCCA_RS00245
location: complement(58914..59522)
location: region:58914-59522:-1
so has part: feature:58914-59522:-1:exon

WP_013944764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58914-59522:-1:exon

TPCCA_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: prfA
locus tag: TPCCA_RS00250
old locus tag: TPCCA_0051
so part of: sequence
location: 59674..60729
location: region:59674-60729:1
so has part: feature:59674-60729:1:exon
subclass of: SO_0000010

position:59674:1
position: 59674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60729:1
position: 60729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59674-60729:1:exon

TPCCA_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: prfA
locus tag: TPCCA_RS00250
old locus tag: TPCCA_0051
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460512.1
GO function: GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 1
translation: MIEKLEELRAQWRKLQQEVENPSLFSSTQSYRERMRDHAYLSKLMEEYDRYLLTEKQLEDAHVLIQDESDADFKDVIRQEIRTLEAALHTSQKRLKTLLIPPDPLQEKNIIMEIRGGTGGDEAALFAADLFRMYTHYAESKQWRYEVLAVSETELGGFKEITFSISGRDVYGSLRYESGVHRVQRVPSTEASGRIHTSAVTVAVLPEMEETEVDIRAEDVRVDVMRASGPGGQCVNTTDSAVRLTHLPTGIVVVCQDEKSQIKNKAKAMRVLRSRVYDLEESKRQVARARERKSQVGSGDRSERIRTYNFPQNRVTDHRVRVTLYKLDAVMQGALDDIIEPLCIASRESVI
SIO_010081: TPCCA_RS00250
subclass of: SO_0000673
so part of: TPCCA_RS00250
location: 59674..60729
location: region:59674-60729:1
so has part: feature:59674-60729:1:exon

WP_013944765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59674-60729:1:exon

TPCCA_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: prmC
locus tag: TPCCA_RS00255
old locus tag: TPCCA_0052
so part of: sequence
location: 60729..61766
location: region:60729-61766:1
so has part: feature:60729-61766:1:exon
subclass of: SO_0000010

position:61766:1
position: 61766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60729-61766:1:exon

TPCCA_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: prmC
locus tag: TPCCA_RS00255
old locus tag: TPCCA_0052
EC number: 2.1.1.297
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342246.1
GO function: GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor N(5)-glutamine methyltransferase
translation: MQELCTIRQARMYARALFQDAPCLRGQNTPLLDADLILSKLLAKPRAWILAHQQDEIASVAHEFKRLVHLRCRGRALAYLTREKEFFGLRFRVTRATLIPKPDTELLVESVLAHVESQMMKPRSVSVHKDTSALPVLKIFEACTGCGCIAIALMHMLRARGTPPLYVISSDICMRALAVARYNARRLLDVSANSRVRFVHADVRAPIPFFSPSEGTDVVQERGVCVPYDVICANPPYVPSAQARALLQDGRGEPLGALDGGADGLDLVRAFAHHSAAALKEGGCVFCEVGSNHAQRAARIFQAAGFATVKISKDLSGKERLISGILRSQSRAVTARRVARVKHGD
SIO_010081: TPCCA_RS00255
subclass of: SO_0000673
so part of: TPCCA_RS00255
location: 60729..61766
location: region:60729-61766:1
so has part: feature:60729-61766:1:exon

WP_013944766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60729-61766:1:exon

TPCCA_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00260
old locus tag: TPCCA_0053
so part of: sequence
location: complement(61836..62891)
location: region:61836-62891:-1
so has part: feature:61836-62891:-1:exon
subclass of: SO_0000010

position:61836:-1
position: 61836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62891:-1
position: 62891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61836-62891:-1:exon

TPCCA_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00260
old locus tag: TPCCA_0053
EC number: 1.17.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010694101.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonucleotide-diphosphate reductase subunit beta
translation: MMESSTILQRRALFNEAGDIELHKRRMVGGNTTNLNDFNNMKYPWVSEWYRQAMNNFWIPEEINMSSDVQDYRNLSAIEKTAYDKILSFLIFLDSIQTANLPNIGQYITANEINLCLTIQAFQEAVHSQSYSYMLDTICSPEERNDILYQWKDDEHLLARNKFIGNLYNEFQDDKSVLALLKVAIANYVLEGIYFYSGFMFFYNLGRNNKMPGSVQEIRYINRDENTHLWLFRSIIQELQKEEPQVFTARNVRLFRDMIREGCEQEIKWGDYVIGDQIPGLNRHMVADYIRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNANLIKTDFFEAKSTAYAKSSAMVDDL
SIO_010081: TPCCA_RS00260
subclass of: SO_0000673
so part of: TPCCA_RS00260
location: complement(61836..62891)
location: region:61836-62891:-1
so has part: feature:61836-62891:-1:exon

WP_013944767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61836-62891:-1:exon

TPCCA_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00265
old locus tag: TPCCA_0054
so part of: sequence
location: 63062..64021
location: region:63062-64021:1
so has part: feature:63062-64021:1:exon
subclass of: SO_0000010

position:63062:1
position: 63062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64021:1
position: 64021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63062-64021:1:exon

TPCCA_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00265
old locus tag: TPCCA_0054
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342247.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA methyltransferase
translation: MLEHMKHEQARSQLSHEPPKRRRASLTVCGLRAVETLGSIHPEKIHRFFFTPVRAKRFGPLCAYLAARKRLYRSVNTQELERLTQSVHHQGVAATIDEPRFPAVTHSQVEFWVQRREFVVLLDRVGDAHNLGAIIRSAAFFGVHSLVVSDCRQQAQVTSATYRVAQGGMEFVQLLRCTNAQEVLEMCAGKMTRVGASPHAFRSLTRLSNILSPEEAVILVLGNEETGLSEHLTAHCDHLCRIAGSGQVESLNVAQAGALFLSTIVQLRQSPQDYTQGHRATPRAQERVHRCGQLEEKGQKNGARVLIPRSGARANSRES
SIO_010081: TPCCA_RS00265
subclass of: SO_0000673
so part of: TPCCA_RS00265
location: 63062..64021
location: region:63062-64021:1
so has part: feature:63062-64021:1:exon

WP_013944768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63062-64021:1:exon

TPCCA_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00270
old locus tag: TPCCA_0055
so part of: sequence
location: 64228..64464
location: region:64228-64464:1
so has part: feature:64228-64464:1:exon
subclass of: SO_0000010

position:64228:1
position: 64228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64464:1
position: 64464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64228-64464:1:exon

TPCCA_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00270
old locus tag: TPCCA_0055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944770.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OadG family protein
translation: MNQIRLFAQSALVSVMGMGMVFAFLLLLICVVRCVGALVSSFGWDRGPDEGVGAADPAGGALAAAIAVAVHEKARSTS
SIO_010081: TPCCA_RS00270
subclass of: SO_0000673
so part of: TPCCA_RS00270
location: 64228..64464
location: region:64228-64464:1
so has part: feature:64228-64464:1:exon

WP_013944770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64228-64464:1:exon

TPCCA_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: oadA
locus tag: TPCCA_RS00275
old locus tag: TPCCA_0056
so part of: sequence
location: 64461..66242
location: region:64461-66242:1
so has part: feature:64461-66242:1:exon
subclass of: SO_0000010

position:64461:1
position: 64461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66242:1
position: 66242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64461-66242:1:exon

TPCCA_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: oadA
locus tag: TPCCA_RS00275
old locus tag: TPCCA_0056
EC number: 7.2.4.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342249.1
GO function: GO:0008948 - oxaloacetate decarboxylase activity [Evidence IEA]; GO:0015081 - sodium ion transmembrane transporter activity [Evidence IEA]
GO process: GO:0006814 - sodium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium-extruding oxaloacetate decarboxylase subunit alpha
translation: MSIPVRISEMVLRDAHQSLHATRMTTEDMLPICDKLDRVGYWSLEAWGGATYDACIRFLNEDPWERLRALKARLPKTPIMMLLRGQNLLGYRHYADDVVDAFVEAAARNGVDVFRIFDALNDPRNLSQAARAAKKTGKHVQMAISYATTPYHTAEKYVELAKEYARFGADSICIKDMSGLLTPYGAYDLVSAIKKSVDLPVELHTHATTGMSVATLVKAAEAGVDVIDTAIASMSMGTSHSPTETLVEILRHTGRDSGLDINLLLEIAAYFRQVRKCYAQFESSFLGADTRILVSQVPGGMLSNLENQLREQGALDKMDQVLKEIPLVQKDCGYIPLVTPTSQIVGTQSVLNVLFGRYHRLTAETRRLLTGQYGRTPASCDAGLVERALKEEKLSQSLVCRPADALPHELDRMRSEARAAGAQDTIEDVLTYAMFPKIAPTFFASRAQGPISFRGKGQGQKQRGESAGSVASYVATVNGTAYAVVQEGAVLRVNGTPYTVRVEAGPSVASGTSQGTVTTAKVGACTTLPAPVAGSVVKHTVQDGATVNSGETVLMVESMKMELEVKATAAGTIHFLIAPGAHVSAGQVLAEIR
SIO_010081: TPCCA_RS00275
subclass of: SO_0000673
so part of: TPCCA_RS00275
location: 64461..66242
location: region:64461-66242:1
so has part: feature:64461-66242:1:exon

WP_013944771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64461-66242:1:exon

TPCCA_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00280
old locus tag: TPCCA_0057
so part of: sequence
location: 66254..67663
location: region:66254-67663:1
so has part: feature:66254-67663:1:exon
subclass of: SO_0000010

position:66254:1
position: 66254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67663:1
position: 67663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66254-67663:1:exon

TPCCA_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00280
old locus tag: TPCCA_0057
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944772.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium ion-translocating decarboxylase subunit beta
translation: MNTRLPLRVLQCVLVGLLVCGPLCAATRRPVRASAPVPMVQSCKDTGARCAPASSMREDMRASHGAAPLLSVRKFLLNTWHSTGLYAFFHGVTQVPDLANPQRTHSVFGYQQALLLVVGLLIIYLGAAQGFEPLLLIPIGFGTVFVNIPGAGMYSEHGMLKLIYDAGVGNEFFPMLIFMGIGALTDFGPLIANPKMAVLGAAAQLGVFLTLFGVAALNFVPGIRYSILDACAIAIIGGADGPTSIYVSAKLAPELMAVIAVAAYSYMALVPIIQPPLMRLLTTRKERLIRMKQLRPVSRIERVLFPLVLLLLSVLLIPAASPLIGMIAFGNFVKECGVVERLSKTMANELLNIVSILLSLGVGSQMTPDKIMNPNALGIIVLGLVAFSVATAGGVFMAKLMNLFLSEKINPLIGSAGVSAVPMAARVSNKVGLEEDPSNFLLMHAMGPNVAGVIGTAIAAGVFISAYGG
SIO_010081: TPCCA_RS00280
subclass of: SO_0000673
so part of: TPCCA_RS00280
location: 66254..67663
location: region:66254-67663:1
so has part: feature:66254-67663:1:exon

WP_013944772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66254-67663:1:exon

TPCCA_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: dnaB
locus tag: TPCCA_RS00285
old locus tag: TPCCA_0058
so part of: sequence
location: complement(67738..69054)
location: region:67738-69054:-1
so has part: feature:67738-69054:-1:exon
subclass of: SO_0000010

position:67738:-1
position: 67738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69054:-1
position: 69054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67738-69054:-1:exon

TPCCA_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: dnaB
locus tag: TPCCA_RS00285
old locus tag: TPCCA_0058
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881507.1
GO function: GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replicative DNA helicase
translation: MPGMPNPTQELKGKIPPHNLEAERAVLGAVLLDDSALSTVTEQLSASSFYSAAHQRIFQALVELSDLGQRPDILVLSEHLRSCEALDFVGGSAYVASLTDAVPSAANIEYYTRIVCDAAMRRSLLKVARIITAEAFNDTVSGNIVLETAQREIYDLTNARRVATFKLLKNLIPDLVNTIETRYRNQSDLVGIATGLTALDNLTGGFQNSELIVIGARPSMGKTALAMTMASNIAIRQRIPTAFFSLEMSNLLLMQRLIAAESGVSATNLRKGLLQLSDFGRIQNAAGEMYDAPLYIVDVPNMKLLDLRAVARRLCVQEKIQIIFVDYLGLIVADNPFAPRYEQFAAISQSLKSLARELDIPIVALSQVGRPAEGSAPNLADIRGSGAIEQDADVVMFLHRDRNETETQLILAKQRNGPIGTVELEFQASFTRFVCKSP
SIO_010081: TPCCA_RS00285
subclass of: SO_0000673
so part of: TPCCA_RS00285
location: complement(67738..69054)
location: region:67738-69054:-1
so has part: feature:67738-69054:-1:exon

WP_013944773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67738-69054:-1:exon

TPCCA_RS05175
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05175
so part of: sequence
location: complement(69038..69265)
location: region:69038-69265:-1
so has part: feature:69038-69265:-1:exon
subclass of: SO_0000010

position:69038:-1
position: 69038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69265:-1
position: 69265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69038-69265:-1:exon

TPCCA_RS05175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881508.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKYLSARSMCCSFFSCAKNCATLGLDSTEGRQFLAVGPQPFASLEGFHGEGGGCLFTTFPPLSIPRRRFCAGHA
SIO_010081: TPCCA_RS05175
subclass of: SO_0000673
so part of: TPCCA_RS05175
location: complement(69038..69265)
location: region:69038-69265:-1
so has part: feature:69038-69265:-1:exon

WP_083815486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69038-69265:-1:exon

TPCCA_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rplI
locus tag: TPCCA_RS00290
old locus tag: TPCCA_0060
so part of: sequence
location: complement(69271..69741)
location: region:69271-69741:-1
so has part: feature:69271-69741:-1:exon
subclass of: SO_0000010

position:69271:-1
position: 69271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69741:-1
position: 69741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69271-69741:-1:exon

TPCCA_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rplI
locus tag: TPCCA_RS00290
old locus tag: TPCCA_0060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881509.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L9
translation: MKIILNQDVKILGEEGDVKEVAAGYFRNYLYPRNLAVPHNRFTVARFKQRQQDIEMRKSLKRQDAANLKARLEAQPVVIAMPAGTNGKLYGAVTSHTVAEQLACMGFEVERKRVEVPGLTLKCVGNYHVTIRLYEEICAVVPVTIKNQSEADSVSE
SIO_010081: TPCCA_RS00290
subclass of: SO_0000673
so part of: TPCCA_RS00290
location: complement(69271..69741)
location: region:69271-69741:-1
so has part: feature:69271-69741:-1:exon

WP_010881509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69271-69741:-1:exon

TPCCA_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpsR
locus tag: TPCCA_RS00295
old locus tag: TPCCA_0061
so part of: sequence
location: complement(69847..70146)
location: region:69847-70146:-1
so has part: feature:69847-70146:-1:exon
subclass of: SO_0000010

position:69847:-1
position: 69847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70146:-1
position: 70146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69847-70146:-1:exon

TPCCA_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpsR
locus tag: TPCCA_RS00295
old locus tag: TPCCA_0061
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881510.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S18
translation: MAEDHPSVDLDTHLSSHRESEESAPKKNRQFYRKKVCRFCTQKLSADYKDPDTLRRFITERGKILPRRITGTCAKHQRRVALEVKRSRAVALLPFVLTE
SIO_010081: TPCCA_RS00295
subclass of: SO_0000673
so part of: TPCCA_RS00295
location: complement(69847..70146)
location: region:69847-70146:-1
so has part: feature:69847-70146:-1:exon

WP_013944774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69847-70146:-1:exon

TPCCA_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00300
old locus tag: TPCCA_0062
so part of: sequence
location: complement(70263..70793)
location: region:70263-70793:-1
so has part: feature:70263-70793:-1:exon
subclass of: SO_0000010

position:70263:-1
position: 70263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70793:-1
position: 70793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70263-70793:-1:exon

TPCCA_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00300
old locus tag: TPCCA_0062
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881511.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MADVNHVVLVGRLTRDAELKYTSAGGALCRFSVAINRRRKSGDDWVEEVNFFDIVLWGRQGEVISQYLIKGKQVAVEGELRQSRWEQEGQSRSKVEISATNVQLLGSVLGGAARAEDGEFSSSRVAAESTAGRVRGTSSDSRSPTGDILGEKRGLDATSSLDEADFSSSDLDTVPF
SIO_010081: TPCCA_RS00300
subclass of: SO_0000673
so part of: TPCCA_RS00300
location: complement(70263..70793)
location: region:70263-70793:-1
so has part: feature:70263-70793:-1:exon

WP_010881511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70263-70793:-1:exon

TPCCA_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpsF
locus tag: TPCCA_RS00305
old locus tag: TPCCA_0063
so part of: sequence
location: complement(70802..71083)
location: region:70802-71083:-1
so has part: feature:70802-71083:-1:exon
subclass of: SO_0000010

position:70802:-1
position: 70802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71083:-1
position: 71083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70802-71083:-1:exon

TPCCA_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpsF
locus tag: TPCCA_RS00305
old locus tag: TPCCA_0063
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881512.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S6
translation: MRTYELMAVFSAHEDLFLQGSTAVRALLQENDAVIAREDHIGERELAYPLKKQKRGRYLLFIVQCEPGKVRELDHKLRLRHDLLTHLFVRVDS
SIO_010081: TPCCA_RS00305
subclass of: SO_0000673
so part of: TPCCA_RS00305
location: complement(70802..71083)
location: region:70802-71083:-1
so has part: feature:70802-71083:-1:exon

WP_010881512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70802-71083:-1:exon

TPCCA_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00310
old locus tag: TPCCA_0064
so part of: sequence
location: 71225..71800
location: region:71225-71800:1
so has part: feature:71225-71800:1:exon
subclass of: SO_0000010

position:71225:1
position: 71225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71800:1
position: 71800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71225-71800:1:exon

TPCCA_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00310
old locus tag: TPCCA_0064
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881513.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLPTAQRRLRGYIRACAPYGRRGEEPVRRRCAFLCARVGHVCVGRSVVQNFVFQDNIYHLARSIDVLYEGLQLNLDECLYAEKVVYDVRFFDHALQKLCAHIDRQSHFPDYLPILHCLFSCGARFLNLLNFLIHRASPVTAQVEFTRMLPFIEKRHSALHENLARSIQEVDTSADASHVVSQDEIDELLEH
SIO_010081: TPCCA_RS00310
subclass of: SO_0000673
so part of: TPCCA_RS00310
location: 71225..71800
location: region:71225-71800:1
so has part: feature:71225-71800:1:exon

WP_010881513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71225-71800:1:exon

TPCCA_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rsmD
locus tag: TPCCA_RS00315
old locus tag: TPCCA_0065
so part of: sequence
location: 71856..72401
location: region:71856-72401:1
so has part: feature:71856-72401:1:exon
subclass of: SO_0000010

position:71856:1
position: 71856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72401:1
position: 72401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71856-72401:1:exon

TPCCA_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rsmD
locus tag: TPCCA_RS00315
old locus tag: TPCCA_0065
EC number: 2.1.1.171
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944776.1
GO function: GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO process: GO:0031167 - rRNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
translation: MRITGGMLKNHVLRCPDGPIRPAMDRMRESLFAVLGDMHGCSFLDLFAGSGVCGLEAYSRGAYPVVFVERNVRSFSVLLQNVQVALCRLECRCMAVERYIARARTLFHFVYLDPPFPYRFHAELLQRLSRASLCREGSVVMVHRPREKKLADKIDSLVRTDQRVYGRSVVDFYRRDKAGLA
SIO_010081: TPCCA_RS00315
subclass of: SO_0000673
so part of: TPCCA_RS00315
location: 71856..72401
location: region:71856-72401:1
so has part: feature:71856-72401:1:exon

WP_013944776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71856-72401:1:exon

TPCCA_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00320
old locus tag: TPCCA_0066
so part of: sequence
location: 72446..72760
location: region:72446-72760:1
so has part: feature:72446-72760:1:exon
subclass of: SO_0000010

position:72446:1
position: 72446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72760:1
position: 72760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72446-72760:1:exon

TPCCA_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00320
old locus tag: TPCCA_0066
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881515.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQRVLESDTPYFVKGIQRPVSTLSDRDRALLNRQGNAYLNEGKLQEAARVFITTGYHDGLTRIGDVYMRKADVLTALRFYYFARNEQKMRPIVSALSVLIRCLI
SIO_010081: TPCCA_RS00320
subclass of: SO_0000673
so part of: TPCCA_RS00320
location: 72446..72760
location: region:72446-72760:1
so has part: feature:72446-72760:1:exon

WP_041609981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72446-72760:1:exon

TPCCA_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00325
old locus tag: TPCCA_0067
so part of: sequence
location: 72790..73929
location: region:72790-73929:1
so has part: feature:72790-73929:1:exon
subclass of: SO_0000010

position:72790:1
position: 72790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73929:1
position: 73929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72790-73929:1:exon

TPCCA_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00325
old locus tag: TPCCA_0067
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944778.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MGCECSVPPFETVETGKRSVDADRIMRLSRDGYAFLKVNDLERAESEFGKILQIEADNNYALVGLGDAARKRRAYQEASDYYTRCLQHYPRNSCALFGLADCYKNMRRYVKAVEVWQQYLEQDSHNIAVLTRMADAYRKIHDFQNSRNLYSQVIALDEHNSYALIGLAHLHYDFKKYREALIYWKKLLECAEHSVDIRVLTSIGNCYRKMKLFSQGLPYFQEALKRDPGNFYGFFGMADCYRGMNMQERSIQYWEKILEKDTQNRVILTRIADAYRHIGEYEKAHQTYKRALDIDYDAYATLGLAVLCKLQGRYEEAVVSLDRLVQLDRKNYRVYVELADCYRKLGQKQKALETLRLFQQFGVKNRVVSELMSELEGAS
SIO_010081: TPCCA_RS00325
subclass of: SO_0000673
so part of: TPCCA_RS00325
location: 72790..73929
location: region:72790-73929:1
so has part: feature:72790-73929:1:exon

WP_245522139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72790-73929:1:exon

TPCCA_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rlmN
locus tag: TPCCA_RS00330
old locus tag: TPCCA_0068
so part of: sequence
location: 74110..75132
location: region:74110-75132:1
so has part: feature:74110-75132:1:exon
subclass of: SO_0000010

position:74110:1
position: 74110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75132:1
position: 75132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74110-75132:1:exon

TPCCA_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rlmN
locus tag: TPCCA_RS00330
old locus tag: TPCCA_0068
EC number: 2.1.1.192
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944779.1
GO function: GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0031167 - rRNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
translation: MEWCCALSGLLPEEIQKACAFAERFRGVQVFRWIAAGCTDFHAMSDLSSETRARLARACVISDTRVYTTLRDVDGTLKLGIELKDKRRVEAVLLVDQVSRKTACLSCQVGCPMACAFCQTGQLGFARNLSASEIVEQFLHLERCVGTLDNVVFMGMGEPMLNLDAVCRAIEILSHPQGRDLSEKRITISTSGHCRGIYSLADRALQVRLAVSLTTANAPLRARLMPRAAHDSLAKLKSAIHYFNEKSGKRVTLELALMRGVNTSERHAQEVIDFAHGLNVHVNLIPWNPVASIHFETPREVEVAHFEALLMRARIPVTRRYQRGNGIGGACGQLGKTAGV
SIO_010081: TPCCA_RS00330
subclass of: SO_0000673
so part of: TPCCA_RS00330
location: 74110..75132
location: region:74110-75132:1
so has part: feature:74110-75132:1:exon

WP_013944779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74110-75132:1:exon

TPCCA_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00335
old locus tag: TPCCA_0069
so part of: sequence
location: complement(75188..75571)
location: region:75188-75571:-1
so has part: feature:75188-75571:-1:exon
subclass of: SO_0000010

position:75188:-1
position: 75188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75571:-1
position: 75571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75188-75571:-1:exon

TPCCA_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00335
old locus tag: TPCCA_0069
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944780.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVRGIPVLQRSTWALVLLVLSSTSACVRKNSLEDVRFPPNSPIGEARRFAVITKAYVLLRDKPGVTGIVIAYARRKDIFPVLGIDLLSKDKESALWVNVERGWLPWDCVQLYSSKAKALAASKKLS
SIO_010081: TPCCA_RS00335
subclass of: SO_0000673
so part of: TPCCA_RS00335
location: complement(75188..75571)
location: region:75188-75571:-1
so has part: feature:75188-75571:-1:exon

WP_013944780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75188-75571:-1:exon

TPCCA_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00340
old locus tag: TPCCA_0070
so part of: sequence
location: complement(75568..75954)
location: region:75568-75954:-1
so has part: feature:75568-75954:-1:exon
subclass of: SO_0000010

position:75568:-1
position: 75568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75954:-1
position: 75954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75568-75954:-1:exon

TPCCA_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00340
old locus tag: TPCCA_0070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881519.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLPFYFLSVATNAAIGFILTVLDSQEESAHDCPFLYDATFSLVLALLSGIAAVCKCVNPIGAQLPVLGDLIPTLAGGTGCALFLHRYCVALSKPSPIPRTLVQYAKPLGLFSLAASILHLLFAPTLFL
SIO_010081: TPCCA_RS00340
subclass of: SO_0000673
so part of: TPCCA_RS00340
location: complement(75568..75954)
location: region:75568-75954:-1
so has part: feature:75568-75954:-1:exon

WP_010881519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75568-75954:-1:exon

TPCCA_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: clpB
locus tag: TPCCA_RS00345
old locus tag: TPCCA_0071
so part of: sequence
location: complement(76005..78641)
location: region:76005-78641:-1
so has part: feature:76005-78641:-1:exon
subclass of: SO_0000010

position:76005:-1
position: 76005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78641:-1
position: 78641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76005-78641:-1:exon

TPCCA_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: clpB
locus tag: TPCCA_RS00345
old locus tag: TPCCA_0071
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881520.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent chaperone ClpB
translation: MNTDRYTVKASEALNDAISLAEAENHGQVEEEHLLHALLSQKDGIISPLIEKIGAKPDFLYDELLQCLRRKPRVTGPAAQTRCAPTLSKACARAERLALKNQDEYVSCEHLLLAISETDSNTARLLHSQGITSKTISAALKDIRGSKRVTSQDPESTFQCLEKYCRDLTTLAREEKIDPVIGRDEEIRRVMQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVSGDVPESLKGKRLLSLDLGALVAGAKFRGEFEERLKAVIEAVQKSDGGVILFIDELHTLVGAGASEGSMDASNLLKPALARGELRSIGATTLNEYRKYIEKDAALERRFQQVYCVQPTVEDTIAILRGLQEKYEVHHGVRIKDEALVAATVLSDRYITNRFLPDKAIDLVDEAASRLKMEIESQPVELDQVERKILQLNIEKASLLKESDPASKERLEKLEKELAGFLERRAAMQVQWQNEKGRIEESRRYKEELERLRIEETMFSREGDLNKAAELRYGKIPELEKKIMLLTAEVEKKSGLEGQLLREEVCEEDIAKIISMWTGIPVSKMMASEQQKYLQLESVLMQRVVGQDEAVRVISDAIRRNKAGLSDTRRPLGSFLCVGPTGVGKTELARTLADFLFNDERALTRIDMSEYMEKHAISRLIGAPPGYVGYDEGGQLTEAVRRRPYSVLLFDEVEKAHQDVFNIFLQILDDGRLTDGQGRVVDFRNTIIIMTSNIGSEHILSARESRTHTSDLPVPETQSTEEQTLPEQIRGLLHTYFRPEFLNRIDEVLIFKRLTRKHIRLITDIQLQMVVERLESRHIKLRVRDAAKAYLAERGYDDTFGARPLKRAIQTELENALAREILSGRFRGGSTIVVDMCKDALCFTEQTS
SIO_010081: TPCCA_RS00345
subclass of: SO_0000673
so part of: TPCCA_RS00345
location: complement(76005..78641)
location: region:76005-78641:-1
so has part: feature:76005-78641:-1:exon

WP_010881520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76005-78641:-1:exon

TPCCA_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00350
old locus tag: TPCCA_0072
so part of: sequence
location: 78845..79117
location: region:78845-79117:1
so has part: feature:78845-79117:1:exon
subclass of: SO_0000010

position:78845:1
position: 78845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79117:1
position: 79117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78845-79117:1:exon

TPCCA_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00350
old locus tag: TPCCA_0072
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881521.1
GO function: GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutaredoxin domain-containing protein
translation: MEKTLTLFGSNHCGQCATALEYLRSNHINFEYVDITGSGKNLKRFLKMRDSMPLFDDVKKEGRIGIPCLSVNDGEQVFLGVEGLDLSAFR
SIO_010081: TPCCA_RS00350
subclass of: SO_0000673
so part of: TPCCA_RS00350
location: 78845..79117
location: region:78845-79117:1
so has part: feature:78845-79117:1:exon

WP_010881521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78845-79117:1:exon

TPCCA_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00355
old locus tag: TPCCA_0073
so part of: sequence
location: complement(79187..80677)
location: region:79187-80677:-1
so has part: feature:79187-80677:-1:exon
subclass of: SO_0000010

position:79187:-1
position: 79187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80677:-1
position: 80677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79187-80677:-1:exon

TPCCA_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00355
old locus tag: TPCCA_0073
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505398.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HDOD domain-containing protein
translation: MCDTQIVVDTEKIRKAIELQLPIAITTYTLPRDMDIYIGQVAKTILDLIGQPHVKDYLTYCISELTTNAKKANTKRIYFREKGLDIFDPQDYKRGMKSFKEESLENINHYLKSQQQEGLYVKVTMQVLSHALVIEVINNCKMTPMEFKRVFDKRVRARRYSGLEEALAHILDNSEGAGLGLVIMMLMLKKLGLEEDVYRLVVEEDRTISRMVVPRNIEIQTQTTKLAASIADRIDDIPQLPSKLLEIQRAIENPDVQLSDIVALISQDVALVTDLLKLVNSARFGMNKRCLDISEAVKRVGLRGLQNLLYSVGAGRVLQSTDDERKQLWNQAYRTGCFALGLAKATGDQALIADSYICGLLHNLGEVVFTSAYPEMLIKLTEIQAERNIPPHVLDTIMSDVGHAEIGAALAQRWNLPEPVINTIRFHHNLPHAPEEYKPLISTVAFANMTIRFLDGETPYEQIPRSLLSFFRIQSEQQLRTTAQTLQSSFEAGQTA
SIO_010081: TPCCA_RS00355
subclass of: SO_0000673
so part of: TPCCA_RS00355
location: complement(79187..80677)
location: region:79187-80677:-1
so has part: feature:79187-80677:-1:exon

WP_245522140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79187-80677:-1:exon

TPCCA_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00360
old locus tag: TPCCA_0074
so part of: sequence
location: 80976..82442
location: region:80976-82442:1
so has part: feature:80976-82442:1:exon
subclass of: SO_0000010

position:80976:1
position: 80976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82442:1
position: 82442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80976-82442:1:exon

TPCCA_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00360
old locus tag: TPCCA_0074
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505399.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: extracellular solute-binding protein
translation: MCRAGLMYQDWGVRGKTDRMCFARSRLFSRGAVGAVCCTVLFLACRVRTPSSVPLHSGSVRAAVPEATSFHWRRYAGTRLRVCFPYHASYRALKAFVPEFESLTGIAVEIDWLQYARMHDKQVLELSKPRGDYDLIAMLCTWKTEYASRGLLRSLDSFFQNPSLCMPHYDFEDLIPVYVETIGYVGGRKPWLGGPGAFLCAVPFGAETSILAYRKDIFHKYRIKVPENYDELLDACKRLRERAQLYGLASRGASGQQALHAYLLHAAPFGAKVLDDSLVPAFHRSRSIATLRWMQEMFAYGPPGMASFAQNEALQAFLQGQTGMYLDTNMIGPLVRDPTRSAIRPHHVGFALHPMAQVRAGEVGGFGLAIPHNSAAPEAAFLLLQWITAPQTGRRVVEQGALPFRQSQLADRALRARFAEFEVLERQLAHCDPDWRPIVPTWGELGTLLGIGINEVLTGVSEPEEAMSALVLPARRILRRHAHARYVP
SIO_010081: TPCCA_RS00360
subclass of: SO_0000673
so part of: TPCCA_RS00360
location: 80976..82442
location: region:80976-82442:1
so has part: feature:80976-82442:1:exon

WP_245522141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80976-82442:1:exon

TPCCA_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00365
old locus tag: TPCCA_0075
so part of: sequence
location: 82560..83450
location: region:82560-83450:1
so has part: feature:82560-83450:1:exon
subclass of: SO_0000010

position:82560:1
position: 82560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83450:1
position: 83450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82560-83450:1:exon

TPCCA_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00365
old locus tag: TPCCA_0075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881524.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter permease
translation: MGKSMSKPRDTISAYCFSAPALVLLMFVLVLPAFLGLRMSFFQWQLSALRTQPVFVGFENYRELFSSIHFWASVRTTLVFTLSVVVLEVVLGLALALVLEHGVPGLRFFRTVFVLPMMIAPVVVGVLWGFLYHPQFGKINYALQAFELGPVLWLANPRLALLSVILTDVWQWTPFVFLVLLAGLQGIPQHLLYAAKVDGANYMQTLLHIKIPHIAPVLGIATVLRLIDSFRGLVVIMTLTNGGPGVATEILPLHLQRIAFEDHRLGKASAVAVLLFLLTSLLTCIFILPTMRRQAR
SIO_010081: TPCCA_RS00365
subclass of: SO_0000673
so part of: TPCCA_RS00365
location: 82560..83450
location: region:82560-83450:1
so has part: feature:82560-83450:1:exon

WP_013944784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82560-83450:1:exon

TPCCA_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00370
old locus tag: TPCCA_0076
so part of: sequence
location: 83490..84320
location: region:83490-84320:1
so has part: feature:83490-84320:1:exon
subclass of: SO_0000010

position:83490:1
position: 83490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84320:1
position: 84320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83490-84320:1:exon

TPCCA_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00370
old locus tag: TPCCA_0076
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342258.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbohydrate ABC transporter permease
translation: MNMIFLKWRTALVLCLLSCIALVSMFPLYEMVATSLKRDADAFRLPPAWFFIPTIENYRQLLQEHHFGRALYNSLVVTLSSTVVSVSAGAAAAYAMQRFRYRGKKAITVALLLLRVIPPVVLVIPIFVWWTALGLVNSLAGLALVYGALNVPFNVWVITTFVAEIPPSLGESAKLDGCSHWMIFTRIVMPLITPALAVVSIFTFRFAWNEYMLGFALTNRKTRTLPVALSLFLTDSGVEWGRITAAATLIAIPACVFTFAAAKYLVVGLTAGAVKG
SIO_010081: TPCCA_RS00370
subclass of: SO_0000673
so part of: TPCCA_RS00370
location: 83490..84320
location: region:83490-84320:1
so has part: feature:83490-84320:1:exon

WP_013944785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83490-84320:1:exon

TPCCA_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00375
old locus tag: TPCCA_0077
so part of: sequence
location: 84467..85969
location: region:84467-85969:1
so has part: feature:84467-85969:1:exon
subclass of: SO_0000010

position:84467:1
position: 84467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85969:1
position: 85969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84467-85969:1:exon

TPCCA_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00375
old locus tag: TPCCA_0077
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016518320.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside-diphosphate sugar epimerase/dehydratase
translation: MRESAHRDGIYIVGAGFAGSVLAREIQTKKVLGTVIAFLDDDPCKIGSNLHGVPVLGPIFEVARIVRITPHDHALIAIPSISIERLRDIYLTLRAAGFTVIKLLPALAQIIDGTAHLVQTREIDPQDLLTRTPVTINLKKSLAYLCGKRVLVTGAGGSIGSELACQLLSGDVERLYLFGHGENSIYQIDKKIRRLQEEGVGSRTVIVPVIGDLKDAAYVRYLIEQLRCDAVFHAAAYKHVPMMELNPVSVIENNVFGTKFLLDACIACRVKRFVLLSTDKAVDPVSIYGVSKMLNEKNVLYAAERVRDFGHDAAYMFVRFGNVLGSRGSIMPLFIEQIKKGGPVTVTDPAMTRFFMTIPEACSLVLQVGGVGINGASYLLDMGEPVSIMETAQQLIRYFGYEPDRDIPIHVVGLRPGERLSEPLVSKDERIEPTVYPKVLRLREREPLDFAHLERLWDQLYPYCFPSGEKVRYRHKEGLVRVLCDSCATLKQRYMPNSEA
SIO_010081: TPCCA_RS00375
subclass of: SO_0000673
so part of: TPCCA_RS00375
location: 84467..85969
location: region:84467-85969:1
so has part: feature:84467-85969:1:exon

WP_013944786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84467-85969:1:exon

TPCCA_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00380
old locus tag: TPCCA_0078
so part of: sequence
location: 85974..87212
location: region:85974-87212:1
so has part: feature:85974-87212:1:exon
subclass of: SO_0000010

position:85974:1
position: 85974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87212:1
position: 87212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85974-87212:1:exon

TPCCA_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00380
old locus tag: TPCCA_0078
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881527.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DegT/DnrJ/EryC1/StrS aminotransferase family protein
translation: MEGTVKKKKEGVRDDNAQHAVFNKQVPFFVPSFSEAEERAVCDVLRSGWITTGTQALAFEKEFAAYVGAPYACAVNSATSGLLLTFDAMGIGPDSKILTSPYTFVSTASSALHLGAQVVYADIERDSYNISAECVEACLKKDARIRAIVPIHIAGNVCNMRDLNALARKYQVAVVEDAAHAFPSKTACGYAGTLSHAGVFSFYATKPLTTGEGGMVCTNDAKLAARIACLRSHGIDRAIWDRYTNGTAPWRYDVTSLGWKCNLPDILAAIGRVQLQKAAHLFAQRARIAAAFTRAFSRYEFFCTPPDGDGNAWHLYLLRLVPGTLSVSRDEFVRLLQERGLGVSMHFIPHFEMTFFKKSLCVRAEDFPECAHKYQHTLTLPLWPGMDDSCVAYVIETVVRTAQECAKGRAYI
SIO_010081: TPCCA_RS00380
subclass of: SO_0000673
so part of: TPCCA_RS00380
location: 85974..87212
location: region:85974-87212:1
so has part: feature:85974-87212:1:exon

WP_010881527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85974-87212:1:exon

TPCCA_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00385
old locus tag: TPCCA_0079
so part of: sequence
location: 87209..89362
location: region:87209-89362:1
so has part: feature:87209-89362:1:exon
subclass of: SO_0000010

position:87209:1
position: 87209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89362:1
position: 89362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87209-89362:1:exon

TPCCA_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00385
old locus tag: TPCCA_0079
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505402.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: xanthine dehydrogenase family protein molybdopterin-binding subunit
translation: MSVFVSDGARTGSVYAQLVRAPRVAGLLLNIDIPSLPDGYSFYTAAHIPGCNAVQCGENTVPVFAHGEVVYAGEPVGILIGPDEHVVRNLVQDVVVHTCAERACASEILCGISEGEPLAQKVAVQGDAETAFKRASHTVCSSCTFEPRVHYFAEMPEVQALPDAHGLHVYAATQWPAHMRKTIAQVLNISEHAVHVHPQQEALSCDGRIWFPSVMASQAALAAYCAKKPVRLSFSFQEYVQYCPKTPKITIAHRTALNAAHAVEGMFVFISLDAGAGNLLIDRMVAHMVHTALGNYAIPRYHIECTAFRSNVGLTDVFNGWADAYTSNALEMHINQLCAELHIFPDEWRVAHMKDTRETQRFAQLLAYLCEEGDFRRKHAAFSMVNAARKAHDTHAWRGIGLALGFQYDPSAMLARSGFSYVLQMTLHTDARIVVHSVPLSDSFKRVVVAFLIREFTCLEDAIFFKSSDEAYGVDLLGPSVESVGMRVFARLVRKCVRAIQRQRFRKPLPITVQGSFNTAKKGQVYQVVTVAKSDVSVPDAQSEQCASKVPVTADTSGKCEDMNGFTKMHGMSTHTPAACIIELELDALCVQPKIVRLWFVCDPGYVFCEKDVYRTVSRSITRALSHVSVEKIWECARTPEYVIIDPSDTPPYHVTLLSSNAAARAVGTVAEGIVPAAYYAALRQILPISQNATHKVPFVARDIFYEMFSLSADDSL
SIO_010081: TPCCA_RS00385
subclass of: SO_0000673
so part of: TPCCA_RS00385
location: 87209..89362
location: region:87209-89362:1
so has part: feature:87209-89362:1:exon

WP_245522142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87209-89362:1:exon

TPCCA_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00390
old locus tag: TPCCA_0080
so part of: sequence
location: 89359..89826
location: region:89359-89826:1
so has part: feature:89359-89826:1:exon
subclass of: SO_0000010

position:89359:1
position: 89359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89826:1
position: 89826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89359-89826:1:exon

TPCCA_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00390
old locus tag: TPCCA_0080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881529.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: (2Fe-2S)-binding protein
translation: MNIRFTLNTEQVHVDAMPHERLSTVLRRCFHLPSIKGSHGHGENGASTILFNGEAVSAYIIPFFLAHETQIVTLDFFQKTKRGRWIVACFAQHHISFCGYCDAGKILTAESLLQRNSVPNEEEVRHAFSGMQCRCTDINALIRALQRMPACHEFS
SIO_010081: TPCCA_RS00390
subclass of: SO_0000673
so part of: TPCCA_RS00390
location: 89359..89826
location: region:89359-89826:1
so has part: feature:89359-89826:1:exon

WP_010881529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89359-89826:1:exon

TPCCA_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00395
old locus tag: TPCCA_0081
so part of: sequence
location: 89833..90681
location: region:89833-90681:1
so has part: feature:89833-90681:1:exon
subclass of: SO_0000010

position:89833:1
position: 89833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90681:1
position: 90681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89833-90681:1:exon

TPCCA_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00395
old locus tag: TPCCA_0081
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881530.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: xanthine dehydrogenase family protein subunit M
translation: MRLYKNSESSVIYYVKSLGQLCAVLRNVAQVQPVGGGTGLVQYQITPVLTLPSHLVVLNGVPELKVISKTEHFLEFGGAVSLQAIVQLGRKNIPVALHEALSHAANPGIRTLATIGGNIAGTRPHASALAPLIALDAKMEVRTGHENFWISVAHYAHARSDTLRHRSHVITRIRLPTDYWDFSYYRRIGSRALFGERADFVFLAQQQKNALSEMRMVFFSDVVMRNREFDNLLLGRAIPLSAGDIAAIVYRSREFFAPESFKSAYIAHCFFHLLEDCLRRLR
SIO_010081: TPCCA_RS00395
subclass of: SO_0000673
so part of: TPCCA_RS00395
location: 89833..90681
location: region:89833-90681:1
so has part: feature:89833-90681:1:exon

WP_013944788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89833-90681:1:exon

TPCCA_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00400
old locus tag: TPCCA_0082
so part of: sequence
location: complement(90728..92314)
location: region:90728-92314:-1
so has part: feature:90728-92314:-1:exon
subclass of: SO_0000010

position:90728:-1
position: 90728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92314:-1
position: 92314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90728-92314:-1:exon

TPCCA_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00400
old locus tag: TPCCA_0082
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-54-dependent Fis family transcriptional regulator
translation: MNCSGCPARALSPLPAEKSLEMILDALYEIARYELAVVLSFESSQILRVRKARGPLYTPRLQHHTIDLTKRQDLARILSQKSPYLFDPTLARTDTYTELIPMPQNHSCLIAPLYIDDTPIGMLTLDHRLCEQFTPDVVRFITTLSKLISLAVAQTDASETLSQKSHALLTERNALLAPQSPAFKNMIGTSPAWTRTLDAIKLVAASDLPVLVCGETGTGKELVARTVHQLSTRSDKPFVPVNCSALVHSLAESELFGHEKGAFSGAVGTHRGRFELAHGGTLFLDEVGDLPLELQPKLLRVLQDGVFERVGGERSVSVSVRIIAATNINLSEAVTQGKFREDLLYRLDVFPLSLPPLRERAEDVALLAEHFIQKIKTRPGFERTQLSPSAFKKIFSLTFPGNVRELRNLLERAALLARGDTIGAEHLVCRTPESGTQTTVYPREHTEVSESIQPAIPLCIRDSSCMVRCTQGKKEETTLVVNFHQAQRAAIQAALDASNGKIYGANGAAEILGLKPSTLQSKMKKLGL
SIO_010081: TPCCA_RS00400
subclass of: SO_0000673
so part of: TPCCA_RS00400
location: complement(90728..92314)
location: region:90728-92314:-1
so has part: feature:90728-92314:-1:exon

WP_013944789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90728-92314:-1:exon

TPCCA_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00405
old locus tag: TPCCA_0083
so part of: sequence
location: 92465..94459
location: region:92465-94459:1
so has part: feature:92465-94459:1:exon
subclass of: SO_0000010

position:92465:1
position: 92465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94459:1
position: 94459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92465-94459:1:exon

TPCCA_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00405
old locus tag: TPCCA_0083
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002699547.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative glycoside hydrolase
translation: MSVLMFPCVWANAKGEFLAGGAKGLYRIAPYAQDVLLSGVSVSKIVAAGENWFLLTSRGIMTSRDLRTFAHVGEQLPKKVVKKIVDREKVFVSQPQPLKDLEVHPDNGAVLVTATNDAVFLSKNGGRTWQNLGCNANSSGIKAVAVLDFPDETGKPVLTVFVSHSLRGIAWMQPEKGRFWTDISATLALGPEATEEISDIAVRRSVHGNELFASYTFVPKIVRLNWAKKRFQDVRVWTAALKDARCIDGLSASVASLVGCRDGSLFEIPLIMPRPFDLARLEQDLRRIPDQILCAWVPRHVSQTGDALSLSELWLLHDRSSLAKEGRFARADLKKGIYVPAHHIKDPKLRAMHFKTIADNKLNMLVYDMKDELGMVRYQSQDPFVRSVGAVRPFVDMKTFVKQAKEKKLYLIARIVVFKDKYLFRWNGFELAVKAGGKPWQGYKNGALRKEEIHEHWVDPYNEKVWRYNVAIAKEAIEFGFDEVQFDYIRFPTDGDNLHQAEYPARESGMDRESALMSFLAYARERIDAPISIDIYGANGWYRTGARTGQDVELLAEYVDVICPMFYPSHFSQSFLAYAPAQERPYRIYYYGAYRNRVLARNRVVIRPWVQAFYLPVSYDRAYYGEDYVQRQVAGIRESIDEGYTYWNNSGRYSDVRPDDARLR
SIO_010081: TPCCA_RS00405
subclass of: SO_0000673
so part of: TPCCA_RS00405
location: 92465..94459
location: region:92465-94459:1
so has part: feature:92465-94459:1:exon

WP_245522143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92465-94459:1:exon

TPCCA_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00410
old locus tag: TPCCA_0084
so part of: sequence
location: complement(94539..94772)
location: region:94539-94772:-1
so has part: feature:94539-94772:-1:exon
subclass of: SO_0000010

position:94539:-1
position: 94539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94772:-1
position: 94772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94539-94772:-1:exon

TPCCA_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00410
old locus tag: TPCCA_0084
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944792.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVVNAVVGADEASARLREYCSGLPDVEKKIAESTSPEGAKLVSDFGIGSVPMVVILDEDSSELFRTADIDELEKFFS
SIO_010081: TPCCA_RS00410
subclass of: SO_0000673
so part of: TPCCA_RS00410
location: complement(94539..94772)
location: region:94539-94772:-1
so has part: feature:94539-94772:-1:exon

WP_013944792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94539-94772:-1:exon

TPCCA_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00415
old locus tag: TPCCA_0085
so part of: sequence
location: complement(94884..95330)
location: region:94884-95330:-1
so has part: feature:94884-95330:-1:exon
subclass of: SO_0000010

position:94884:-1
position: 94884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95330:-1
position: 95330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94884-95330:-1:exon

TPCCA_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00415
old locus tag: TPCCA_0085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944793.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS sugar transporter subunit IIA
translation: MNLETVLTPETVSLHLKGSTKEEIIDEMLEMFVRAGRVSDKVAARECVLDRERKMSTGMKYGIAIPHGKTNSVSSLVAGVGVSDSPVDFDSLDQEPCRIFIMTLSPLDVTGPHLQFLAEISLLFKSSEKRREILDATSKAEVIKILTE
SIO_010081: TPCCA_RS00415
subclass of: SO_0000673
so part of: TPCCA_RS00415
location: complement(94884..95330)
location: region:94884-95330:-1
so has part: feature:94884-95330:-1:exon

WP_013944793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94884-95330:-1:exon

TPCCA_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00420
old locus tag: TPCCA_0086
so part of: sequence
location: 95447..96355
location: region:95447-96355:1
so has part: feature:95447-96355:1:exon
subclass of: SO_0000010

position:95447:1
position: 95447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96355:1
position: 96355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95447-96355:1:exon

TPCCA_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00420
old locus tag: TPCCA_0086
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505404.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PilZ domain-containing protein
translation: MGFATREQLNRYYDLYKDVDVTFSKDVMQALCFNARQVCVRSAGGQCSCVMNSASMVGAKVILSRKSSLLESIQVEGASVSIRFSFFESDARDAVSFFVTSRVLGVEDYAESTELVVLSVAYTQRIPDMLIERLGLLVEANISSKKRKSERIAVNKESMRRIGLMRAETIVFIQAIPRRCVLRDVSFGGAKFIMMGVAPFLKGKETVLKLDFEEPSTSMSIRGHVVRADQVEGRKDLVAVAMEYDFDVVPVAYRMCLNRYASDRCRRFPGTDEDCSAASAGDPGRSSAGAEGIDLSVPFSLS
SIO_010081: TPCCA_RS00420
subclass of: SO_0000673
so part of: TPCCA_RS00420
location: 95447..96355
location: region:95447-96355:1
so has part: feature:95447-96355:1:exon

WP_245522144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95447-96355:1:exon

TPCCA_RS05700
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05700
old locus tag: TPCCA_0087
so part of: sequence
location: complement(96358..96921)
location: region:96358-96921:-1
so has part: feature:96358-96921:-1:exon
subclass of: SO_0000010

position:96358:-1
position: 96358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96921:-1
position: 96921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96358-96921:-1:exon

TPCCA_RS05700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05700
old locus tag: TPCCA_0087
inference: COORDINATES: protein motif:HMM:NF014678.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF192 domain-containing protein
translation: MLKRIESVLYKAFEEHVSFYLHRTPAALSLLLLGLLSCVACRTNSLETAQIAFCTGGQYVPVVVELALTEEARRRGYMGRTRIPDGTGMLFVYKQDTRLSFWMKDTPHPLSLAFLDAQGAIVQIEDLVPLSTHSVRSNRSVRYALEVPRGWFVRSKLLVGARLSARSLARIRRHADPPKGQSGDKRH
SIO_010081: TPCCA_RS05700
subclass of: SO_0000673
so part of: TPCCA_RS05700
location: complement(96358..96921)
location: region:96358-96921:-1
so has part: feature:96358-96921:-1:exon

WP_013944795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96358-96921:-1:exon

TPCCA_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00430
old locus tag: TPCCA_0088
so part of: sequence
location: complement(96881..97495)
location: region:96881-97495:-1
so has part: feature:96881-97495:-1:exon
subclass of: SO_0000010

position:96881:-1
position: 96881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97495:-1
position: 97495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96881-97495:-1:exon

TPCCA_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00430
old locus tag: TPCCA_0088
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881537.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNYAKNCMALALGGVLHMQSYLCSSPSPSRGAGGARMLATVTPLSQTHSPEKIPAVYRALSLGMGVTEVKEALKKDSIFGYRGERDVSLLMSENRILIETTGPHFIARSWFQFYRDRLYAMTFKLNTDAIDYYSVYENLCKKYGEPHKLSPRVALWEDASTRLVLERPLIIKYIDIRAFNEQLSARDTQKSNAEKDRKRFVQGF
SIO_010081: TPCCA_RS00430
subclass of: SO_0000673
so part of: TPCCA_RS00430
location: complement(96881..97495)
location: region:96881-97495:-1
so has part: feature:96881-97495:-1:exon

WP_013944796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96881-97495:-1:exon

TPCCA_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00435
old locus tag: TPCCA_0089
so part of: sequence
location: complement(97525..98760)
location: region:97525-98760:-1
so has part: feature:97525-98760:-1:exon
subclass of: SO_0000010

position:97525:-1
position: 97525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98760:-1
position: 98760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97525-98760:-1:exon

TPCCA_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00435
old locus tag: TPCCA_0089
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944797.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cyclic nucleotide-binding domain-containing protein
translation: MLQLTFVNFKKGSYILVEGKADADLFYIIHSGQVCIAKQVEIVAEEEGNVLTAGNFLGVVACMSRHNQIETAVALTDVVLIAIRYEQFPQLIEKNAAIAMKIILSFTKKMRYLNEALTQLTLKKHTDVDVSHLFAVGEYYVKMTKFELALYAYYHYLKESPKGTYAEEARKRFVAIKSTGVKVPVEILEPNILEATRCYDREAMVFCECQSGNEFYIIQKGHVKITKIVDNNEVVLAILKEGDMFGEMALLENKPRSASAIVMSDGCQLLAVNRKNFQQLVATQPQLTARLTTTLADRIWSMYRQLANTLLPEPTEKMYDMLAIQLEKIRYIPSTGKAYDFEFGPIELAHMCGFPKDIVSQVTEDFLREPIVRCVDNKISVTDDLELVKRVAYFKKKRILAKARKDPHNRQ
SIO_010081: TPCCA_RS00435
subclass of: SO_0000673
so part of: TPCCA_RS00435
location: complement(97525..98760)
location: region:97525-98760:-1
so has part: feature:97525-98760:-1:exon

WP_013944797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97525-98760:-1:exon

TPCCA_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00440
old locus tag: TPCCA_0090
so part of: sequence
location: complement(98843..99907)
location: region:98843-99907:-1
so has part: feature:98843-99907:-1:exon
subclass of: SO_0000010

position:98843:-1
position: 98843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99907:-1
position: 99907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98843-99907:-1:exon

TPCCA_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00440
old locus tag: TPCCA_0090
EC number: 1.3.1.98
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944798.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate dehydrogenase
translation: MSAHRIRARRITRRNVPLAERCSFRIGGAAQFWAEPRSCTQLRALIEEAQRARIPLSLIGGGSNVLIADEGVPGLMLSLRRFRSLHTQTQRDGSVLVHAGAGLPVAALLAFCAHHALRGLETFAGLPGSVGGAAYMNARCYGRAIADCFHSARTLVLHPVRSRAKELPEVRKNAQDKRGEYLGLYGGPFTCSSFQTVFARAGDWGYKRSPFQSPHGVELHAGRRLILSLCVRLTPGNPAQIRKHMQEKIADRISKGQFRFPSAGSAFKNNPAFGKPSGILIEEAGLRGTSCGAAQVAPWHGNLIINTGNATAHQVRTLLRVVRQRVFETHGVWLEREIIFSGESVRMTSSSRDS
SIO_010081: TPCCA_RS00440
subclass of: SO_0000673
so part of: TPCCA_RS00440
location: complement(98843..99907)
location: region:98843-99907:-1
so has part: feature:98843-99907:-1:exon

WP_013944798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98843-99907:-1:exon

TPCCA_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00445
old locus tag: TPCCA_0091
so part of: sequence
location: 100089..101651
location: region:100089-101651:1
so has part: feature:100089-101651:1:exon
subclass of: SO_0000010

position:100089:1
position: 100089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101651:1
position: 101651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100089-101651:1:exon

TPCCA_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00445
old locus tag: TPCCA_0091
EC number: 6.1.1.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881540.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine--tRNA ligase
translation: MALRVYNTLTRQQEHFQPWEHGHVRLYGCGPTVYNYPHLGNLRAYVFQDTVRRTLHFLGYRVTYVMNITDVGHLESDADSGEDKLVRSAQAHGHSVLQVAAHYRAAFFRDTALLGIEEPSIVCNASDCIQDMIAFIEQLLARGHAYCAGGNVYFDVRSFPSYESFGSAAVEDVQEGEDAARARVAHDTHKRDARDFVLWFTRSKFVRHALTWDSPWGRGYPGWHIGCSAMSMKFLGPRCDIHIGGVDHIRVHHRNERAQCEAITGAPWVRYWLHHEFLLMQLQKRAVHADMGSSVVSSFSKMSKSCGQFLTLSSLQERGFQPADFRFFLLSGQYRTQLAFSWDALKTARAARRSFVRRVARVVDAARATTGSVRDTSAECAAERVCESRASESELLLTDFRAALEDDFSTPRALSALQKLVRDTSVPPSLCVSALQVADTVLGLGIIQEATASLSAQVPAGDALPQRPSPSEEWIGQLVRARAHARQTRDFPRADEIRRQLKAEGIELEDTHLGTIWKRV
SIO_010081: TPCCA_RS00445
subclass of: SO_0000673
so part of: TPCCA_RS00445
location: 100089..101651
location: region:100089-101651:1
so has part: feature:100089-101651:1:exon

WP_013944799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100089-101651:1:exon

TPCCA_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00450
old locus tag: TPCCA_0092
so part of: sequence
location: 101668..102210
location: region:101668-102210:1
so has part: feature:101668-102210:1:exon
subclass of: SO_0000010

position:101668:1
position: 101668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102210:1
position: 102210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101668-102210:1:exon

TPCCA_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00450
old locus tag: TPCCA_0092
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944800.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor
translation: MLHEQELLRAQDDADFKLMYEQLVPVLYRVAYNVVREEDIAEGLCHDAFIAMTEKRMEFPSLSDAKYWLIRVVKNASLNYAKRRVRERHSCEQASREHVCEPDTGELRLLRIETIEQVRAALDRLPEHLRVVLQLREYGDLNYKEIGRILGISEGNVKVRVFRARERLAKYLGETDAYLS
SIO_010081: TPCCA_RS00450
subclass of: SO_0000673
so part of: TPCCA_RS00450
location: 101668..102210
location: region:101668-102210:1
so has part: feature:101668-102210:1:exon

WP_013944800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101668-102210:1:exon

TPCCA_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00455
old locus tag: TPCCA_0093
so part of: sequence
location: 102233..102841
location: region:102233-102841:1
so has part: feature:102233-102841:1:exon
subclass of: SO_0000010

position:102233:1
position: 102233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102841:1
position: 102841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102233-102841:1:exon

TPCCA_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00455
old locus tag: TPCCA_0093
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944801.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anti-sigma factor
translation: MDGEGSQLQRREICAHLQGCTHCATCVAHYRAMRSLVKHADCVSSRDFTMAFPYLRVRHRVASCMPKPWWQARSSPLSAAGPVRAAALAVAVASLCVCTLLLTHIVERRPVSRAGEASFTPIVPMRVRAPVGYARGVKVFGPAVSANSNVLRKPAAVFTVCAFAQLYGSDPAYEMETVPVRLSVIPVPSYVLSASKAQFFSP
SIO_010081: TPCCA_RS00455
subclass of: SO_0000673
so part of: TPCCA_RS00455
location: 102233..102841
location: region:102233-102841:1
so has part: feature:102233-102841:1:exon

WP_245522145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102233-102841:1:exon

TPCCA_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: pta
locus tag: TPCCA_RS00460
old locus tag: TPCCA_0094
so part of: sequence
location: 102979..103989
location: region:102979-103989:1
so has part: feature:102979-103989:1:exon
subclass of: SO_0000010

position:102979:1
position: 102979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103989:1
position: 103989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102979-103989:1:exon

TPCCA_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: pta
locus tag: TPCCA_RS00460
old locus tag: TPCCA_0094
EC number: 2.3.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944802.1
GO function: GO:0008959 - phosphate acetyltransferase activity [Evidence IEA]
GO process: GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate acetyltransferase
translation: MTFVESMQRRAVLAQKRLVLPEACEQRTLEAARLIVFRNMAAKVFLVGCERDIKNTADRCGIDLTDMVVIDPSVSKHRDQFAERYFQKRKHKGISLAQAAEDMRDPLRFAAMMLDQGHADAMVAGAENTTARVLRAGLTIIGTLPSVKTASSCFVMDTNNPRLGGTRGLFIFSDCAVIPTPTAEQLADIACSAAESCRTFIGEEPTVALLSYSTKGSGGDSDENILRVREAVRILHERRVDFTFDGELQLDAALVPKITEKKAPHSPIMGKVNTLVFPDLSSGNIGYKLVQRLSDADAYGPFLQGFAKPLSDLSRGCSVEDIVAACAVTLVQSNGR
SIO_010081: TPCCA_RS00460
subclass of: SO_0000673
so part of: TPCCA_RS00460
location: 102979..103989
location: region:102979-103989:1
so has part: feature:102979-103989:1:exon

WP_013944802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102979-103989:1:exon

TPCCA_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00465
old locus tag: TPCCA_0095
so part of: sequence
location: 103989..105935
location: region:103989-105935:1
so has part: feature:103989-105935:1:exon
subclass of: SO_0000010

position:105935:1
position: 105935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103989-105935:1:exon

TPCCA_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00465
old locus tag: TPCCA_0095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881544.1
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MTSTQARIREAVRAGSVRDYARAIRILEELAASGKAEGCHHPDGGAVYERGAQEEWDEGSSESHAHGGDGTQDAYPEIYLYLARAYHAQRQYARAVTYATVYSRRVPRDGAGWFFLGRSYLALHQGGYAVAALRRSVRENPASLEAQALLGLAYLRSKKPRAARMVFEQALAQYPDNKRLNAGYLNSLFVEAVQHLKRGSADLARQMFTFLINQDVDGVAPRLYLAHAFRSLKHFPEALTQYRAASAFAPHDTVLKWYEAAMLVEMGCLSQAAALLSTLGVSIERDQISDRFLVMGAVRKHMEEGAWARAASAAHLYLKTFGGSVEIHLLMAEVHRRAGRVNVALNHYTRAMKIEPKNCYPHYGLMVCLQEARRWQELAKAIRRAEGAGCDAQDCYYYRVITAAHLSNPPEEVLPHLQELARGGKADQLLFNALGVTYVRLGMADLALRWYEKTLLLDAEDEEACVGLIACYETLCDDARAYTQYGAYLSRWRDNRVIRKDFIAFLERTERWSEAADHIELLASGERGGFWGTRLAFARKKAGQYRQAAIIYRALLRQRPDERVLLHNLVYCLDKMGQADAGLRLLRAACNAFGTSVESRLIEGVLCLHTRRINAAIRTLRAVLEQRPGYTAASELLAKAYALASSRA
SIO_010081: TPCCA_RS00465
subclass of: SO_0000673
so part of: TPCCA_RS00465
location: 103989..105935
location: region:103989-105935:1
so has part: feature:103989-105935:1:exon

WP_013944803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103989-105935:1:exon

TPCCA_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00470
old locus tag: TPCCA_0096
so part of: sequence
location: complement(106009..106371)
location: region:106009-106371:-1
so has part: feature:106009-106371:-1:exon
subclass of: SO_0000010

position:106009:-1
position: 106009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106371:-1
position: 106371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106009-106371:-1:exon

TPCCA_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00470
old locus tag: TPCCA_0096
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881545.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraR/DksA family transcriptional regulator
translation: MDQSFVEEMKVSLVERKRSLARSLTTNNEDFQAIVAGVDPKDSADIASDDMDRKMLESLSAKDLRCLQQIESALLRIEQGRYGKCADCGESIPEDRLRAIPYSLMCIECQSARESKRRAF
SIO_010081: TPCCA_RS00470
subclass of: SO_0000673
so part of: TPCCA_RS00470
location: complement(106009..106371)
location: region:106009-106371:-1
so has part: feature:106009-106371:-1:exon

WP_010881545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106009-106371:-1:exon

TPCCA_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: infA
locus tag: TPCCA_RS00475
old locus tag: TPCCA_0097
so part of: sequence
location: 106541..106759
location: region:106541-106759:1
so has part: feature:106541-106759:1:exon
subclass of: SO_0000010

position:106541:1
position: 106541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106759:1
position: 106759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106541-106759:1:exon

TPCCA_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: infA
locus tag: TPCCA_RS00475
old locus tag: TPCCA_0097
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881546.1
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-1
translation: MTKEEAIEVDGVVKEALPNTTFRVQLQNGHEILAYLSGRMRKHYIRIVPGDSVKVALSPYDLSRGRIMFRER
SIO_010081: TPCCA_RS00475
subclass of: SO_0000673
so part of: TPCCA_RS00475
location: 106541..106759
location: region:106541-106759:1
so has part: feature:106541-106759:1:exon

WP_010881546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106541-106759:1:exon

TPCCA_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00480
old locus tag: TPCCA_0098
so part of: sequence
location: complement(106812..107468)
location: region:106812-107468:-1
so has part: feature:106812-107468:-1:exon
subclass of: SO_0000010

position:106812:-1
position: 106812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107468:-1
position: 107468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106812-107468:-1:exon

TPCCA_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00480
old locus tag: TPCCA_0098
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944804.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: J domain-containing protein
translation: MSERTVPDHYAILGVAADASEEHIKKAFRAQALKYHPDKNPGDACAEDQFKRINAAYAVLSDRASRARYDAERAGGTFWSSRAGRDASEGFGAWTSGMDDKAGARTRYTHTRGPWRGHAQETEHFEGWYTFFGGFPGNGWSYWSSADAPPDPAGPTARTGSRKDGARLLIQGAALVLLALFGLRFFLVFGFFGIAFSVSCLARGVHTLRAGLSILLEG
SIO_010081: TPCCA_RS00480
subclass of: SO_0000673
so part of: TPCCA_RS00480
location: complement(106812..107468)
location: region:106812-107468:-1
so has part: feature:106812-107468:-1:exon

WP_013944804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106812-107468:-1:exon

TPCCA_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00485
old locus tag: TPCCA_0099
so part of: sequence
location: complement(107472..108227)
location: region:107472-108227:-1
so has part: feature:107472-108227:-1:exon
subclass of: SO_0000010

position:107472:-1
position: 107472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108227:-1
position: 108227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107472-108227:-1:exon

TPCCA_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00485
old locus tag: TPCCA_0099
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881548.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UMP kinase
translation: MVTVLSLGGSIVAPETPDVELLGRFVRSVQRYLYEDASRKLIVVSGGGAPARTYQNAYRALRRSLSSPACAKPAHEGDNQEDRELYATAEHVELDWIGIMATRLNAQLLKSLFGILCPNPVVYDPTAANVFSGQVLVAAGWKPGFSTDTDAVLLAERYSAKTVINLSDVAHVYTGDPRSDKDAKALTSLSWDDFLLLVDKEWVPGSHVPFDPVASVRAKKSGIQVICATGRDLPNLERILNRQEFVGTTIG
SIO_010081: TPCCA_RS00485
subclass of: SO_0000673
so part of: TPCCA_RS00485
location: complement(107472..108227)
location: region:107472-108227:-1
so has part: feature:107472-108227:-1:exon

WP_013944805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107472-108227:-1:exon

TPCCA_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00490
old locus tag: TPCCA_0100
so part of: sequence
location: 108467..109024
location: region:108467-109024:1
so has part: feature:108467-109024:1:exon
subclass of: SO_0000010

position:108467:1
position: 108467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109024:1
position: 109024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108467-109024:1:exon

TPCCA_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00490
old locus tag: TPCCA_0100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505407.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TlpA disulfide reductase family protein
translation: MFRSVLVLAVWGVSCVQAADVAHNADVPSRSLKALERFRFFVYPKPLDLSSDFHAKALKEGALVPSLFKGKVTLLNFWATWCPPCRAEMPSMDRMQALMRGNDFQIVAVNVGDSRKQVESFIARGKHTFPIYLDEEGSLGSVFASRGLPTTYVVDKAGRIVAVVVGSVEYDQPELVALFKELARD
SIO_010081: TPCCA_RS00490
subclass of: SO_0000673
so part of: TPCCA_RS00490
location: 108467..109024
location: region:108467-109024:1
so has part: feature:108467-109024:1:exon

WP_245522146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108467-109024:1:exon

TPCCA_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00495
old locus tag: TPCCA_0101
so part of: sequence
location: 109017..109811
location: region:109017-109811:1
so has part: feature:109017-109811:1:exon
subclass of: SO_0000010

position:109017:1
position: 109017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109811:1
position: 109811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109017-109811:1:exon

TPCCA_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00495
old locus tag: TPCCA_0101
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c biogenesis protein CcdA
translation: MTSVPGVVGSFLAGLLSFLSPCVLPLIPAYVSFISGESLGSIRAGAARLQVFLSSVFFVLGLTTVFVLFSIVFSGGVQLAGAGVLTVLTRVAGVGVILLGLNTIFDVVPFLRVERRMHTTVRRVGVFRAYLFGLLFATGWTPCVGPILSSLLFYAASSGQLLHAAGLLTVYALGLGLPFVFAGIFFGRAERVFAWVKRHMHAVKLASGMLIVFFGLLMLTSGLQALSRLFLRAGFALEEYSTRGITPLRQIAALLAQWFLYQGV
SIO_010081: TPCCA_RS00495
subclass of: SO_0000673
so part of: TPCCA_RS00495
location: 109017..109811
location: region:109017-109811:1
so has part: feature:109017-109811:1:exon

WP_013944807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109017-109811:1:exon

TPCCA_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00500
old locus tag: TPCCA_0102
so part of: sequence
location: complement(109849..111822)
location: region:109849-111822:-1
so has part: feature:109849-111822:-1:exon
subclass of: SO_0000010

position:109849:-1
position: 109849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111822:-1
position: 111822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109849-111822:-1:exon

TPCCA_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00500
old locus tag: TPCCA_0102
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881551.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UvrD-helicase domain-containing protein
translation: MLSTLNPEQRRAVTTLEGPLLIIAGAGSGKTRVITARIAYMLECGILQSRILALTFTNKAAHEMSERIKALTGKPLRNMTVSTFHAFGVTILREHIHVLGWRKNFSIYDENDKRALIREAAKEVHLLPEVLDTNCVSTLFSAIKMQRKNLKELQHKERALWHEYQTALKLFNAVDFDDLIVLPIQIFSEYPDILASYKDRYRYILVDEFQDTSAQQYRLMKMLATQNICVVGDDDQSIYSWRGAYHDNFLSFEKDFPYATEITLEQNYRSTGTILAAANGVIAHNIQRKEKALWSGNDSGKPIEIFNPETERDEAIFIANTILAEQIRASYSFSSFGVLLRTNSFMRIIEDVFLQENIPYRVSGGMSFFQRKEIKDVLSYLRVISNPDDDVNLLRIINTPRRGIGKKTLHLVSDIANTQQCSVFNALNQIINKTHAVDLKESHRTAVENFLQLITQARTHLLSGKNLAYKVRKFVEDIQYFNYLIQEFQKNEHAARFKFLQIEHLVESIEHWEQSSEHGSLYDYLNRVTLLARDNVQKETEGAVSLMTIHASKGLEFPVVLIAGVEAGTIPHERSIEEVHSIEEERRLFYVAITRAKEKLYLTHCRTRKRGGKREERTASPFLDEIPKHLVRAHAPEGKISEEEVTLAFTRIKKLFT
SIO_010081: TPCCA_RS00500
subclass of: SO_0000673
so part of: TPCCA_RS00500
location: complement(109849..111822)
location: region:109849-111822:-1
so has part: feature:109849-111822:-1:exon

WP_013944808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109849-111822:-1:exon

TPCCA_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00505
old locus tag: TPCCA_0103
so part of: sequence
location: 111887..113251
location: region:111887-113251:1
so has part: feature:111887-113251:1:exon
subclass of: SO_0000010

position:111887:1
position: 111887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113251:1
position: 113251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111887-113251:1:exon

TPCCA_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00505
old locus tag: TPCCA_0103
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009106931.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent DNA helicase RecQ
translation: MGNTSDWVEMDGLRYVYAAQGAAPVPAPTDNPACDAHMSHDVIARTAQAVFGIRALFPWQRLVIANILDAAHACTHTTPFAAAGSSQTDATRVTHVDDVQPEDNFVGAMQDTRFDQDGVSRAHQVVLLPTGAGKSLCFQVPALFLEGPTLVVYPLLSLMRDQCRRMQAVGFSVILLRGGLNAQERAYMYAQLDRCAEAYGRMRGVTPPAHQTAEFPPADSISFDASLFSDDVSTFSKVVHVDERLAQKRTESRRGVCIIASPEILTQPALRARVRACRVAHLVIDEAHCVSEWGDSFRPDYVRLGELVQDLAPQVVTAFTATASQTVLARIMEVLFGGRAHVLQGTVDRPNIRYTVRTVLCKQTALTQLVARCVRPAVIFCARRVQVERVTHHLRTCLSDTQIRFYHAGLQREEKETVERWFHTHDSAVLVTTCAWGMGVDNRMYVRSFTWMRH
SIO_010081: TPCCA_RS00505
subclass of: SO_0000673
so part of: TPCCA_RS00505
location: 111887..113251
location: region:111887-113251:1
so has part: feature:111887-113251:1:exon

WP_245522147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111887-113251:1:exon

TPCCA_RS05585
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05585
so part of: sequence
location: 113236..113709
location: region:113236-113709:1
so has part: feature:113236-113709:1:exon
subclass of: SO_0000010

position:113236:1
position: 113236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113709:1
position: 113709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113236-113709:1:exon

TPCCA_RS05585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05585
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDAPLTVEAYVQEVGRAGRDGMRADAFLLWSPRDARSIETLPHAQRVRAHVLRHFAESGRCCRAVLLESLGEQNVCAGCDVCAGTARFVCEDVEALLQFLKKNARRFTVSSLVQHLALHQKVLSVADVHALLYYALETGRVKKKHSLLWGDVLYVAR
SIO_010081: TPCCA_RS05585
subclass of: SO_0000673
so part of: TPCCA_RS05585
location: 113236..113709
location: region:113236-113709:1
so has part: feature:113236-113709:1:exon

WP_245522148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113236-113709:1:exon

TPCCA_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: nadN
locus tag: TPCCA_RS00510
old locus tag: TPCCA_0104
pseudo: true
so part of: sequence
location: 113956..>115575
location: region:113956-115575:1
so has part: feature:113956-115575:1:exon
subclass of: SO_0000010

position:113956:1
position: 113956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115575:1
position: 115575
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113956-115575:1:exon

TPCCA_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: nadN
locus tag: TPCCA_RS00510
old locus tag: TPCCA_0104
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881553.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0008253 - 5'-nucleotidase activity [Evidence IEA]; GO:0000210 - NAD+ diphosphatase activity [Evidence IEA]
GO process: GO:0019677 - NAD catabolic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NAD nucleotidase
SIO_010081: TPCCA_RS00510
subclass of: SO_0000673
so part of: TPCCA_RS00510
location: 113956..>115575
location: region:113956-115575:1
so has part: feature:113956-115575:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113956-115575:1:exon

TPCCA_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: polA
locus tag: TPCCA_RS00515
old locus tag: TPCCA_0105
so part of: sequence
location: 115750..118743
location: region:115750-118743:1
so has part: feature:115750-118743:1:exon
subclass of: SO_0000010

position:115750:1
position: 115750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118743:1
position: 118743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115750-118743:1:exon

TPCCA_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: polA
locus tag: TPCCA_RS00515
old locus tag: TPCCA_0105
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342269.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase I
translation: MQEKKTLYLLDAYGLIYRSYHAFARAPLINDSGANVSAVYGFFRSLHTLLCHYRPRYFVAVFDSLTPTFRHVQYPAYKAKRDKTSAELYAQIPLIEEILCALGITVLRHDGFEADDLIATLVKRVAAEHCHVVIISSDKDVLQLVCDTVQVLRLDIDHKWTCCDAAYVQQRWTVMPTQLLDLFSLMGDSSDNVPGVRGIGPKTAAHLLHCFGTLDGIYRHTYSLKEALRTKIVCGKKDAFFSRSLIELRDDVPCVFSLEDSCCIPLDVTSAARIFVREGLHALAQQYRACVQEIDTEATNDTLQMTESSVLTSGRCANECFLSQVEGRASTPEVNSVLKSELKTSAVSGAMPIENRDLRQDVMLARSAGHYRGVTDPVELKRIIDCACANGVVAFDCETDGLHPHDTRLVGFSICFQEAEAFYVPLIVPDVSLHTESTQCTCARSTNVETEKECTEQHGVSASAVQDPAYVQAVMHQLRRLWNDETLTLVMHNGKFDYHVMHRAGVFEHCACNIFDTMVAAWLLDPDRGTYGMDVLAASFFQIRTITFEEVVAKGQTFAHVPYECAVRYAAEDADITFRLYHYLKLRLETAGLLSVFETIEMPLLPILARMEEVGIFLRKDVVQQLTRSFSDLIQQYEHDIFSLAGHEFNIGSPKQLQTVLFQELHLPPGKKNTQGYSTDYSVLKKLARKHPIAEKILLFRDLSKLRSTYTESLAKLADQTGRVHTSFVQIGTATGRLSSRNPNLQNIPIKSTEGRKIRQAFQATVGHELISADYTQIELVVLAHLSQDRNLLNAFRQHIDIHALTAAYIFNVSIDDVQPAMRRIAKTINFGIVYGMSAFRLSDELKISQKEAQSFIYRYFETYPGVYAFSTQVAEQTRKTGYVTSLAGRRRYIRTIDSRNTLERARAERMALNTQIQSSAADIVKIAMIAIQRAFARRPLRAQLLLQVHDELIFEAPAAETAIVKEILFAEMEHAVELSIPLRIHVESGNSWGDFH
SIO_010081: TPCCA_RS00515
subclass of: SO_0000673
so part of: TPCCA_RS00515
location: 115750..118743
location: region:115750-118743:1
so has part: feature:115750-118743:1:exon

WP_013944810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115750-118743:1:exon

TPCCA_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00520
old locus tag: TPCCA_0106
so part of: sequence
location: complement(118775..120307)
location: region:118775-120307:-1
so has part: feature:118775-120307:-1:exon
subclass of: SO_0000010

position:118775:-1
position: 118775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120307:-1
position: 120307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118775-120307:-1:exon

TPCCA_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00520
old locus tag: TPCCA_0106
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881555.1
GO function: GO:0015652 - quaternary ammonium group:proton symporter activity [Evidence IEA]
GO process: GO:0015697 - quaternary ammonium group transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BCCT family transporter
translation: MQKEKCDFSVSLIPLGIVISCALLFISFPDISHRVIGTLLNILVNKLGFFYILTGLFFLGTTLTIAFSRYGAVYLGTTRTARYSNFTWGSMIFTSTMAADILYWSLIEWAHYFTQAPFIAEHSPPTERQEWAAAYPLFHWGIIPWSFYVLLAVAFGYMLHVKKRHTHKISEACRPLLGAYVDGIIGEAIDICSVVGLLLGVATTFSLATPLLSLMVSLLFGISNTQLLALALLCVIALVYTTAVLLGTQGISKLSRAAVYCFSTVLVFFLCAGPTVYLIETGITAIGKMLQNFFLMATWMDPSRISLQETDGTLGFPQRWTIFYWAYWITWSVATPFFIGAISEGRTIRNTIVGGLCWGIAGTYGSFIVLGNYGLYLQTHHLLPAAYLLRAGNTPAEVIIAIIQTLPCAYIVMALLAATMIAFYASTFDALTLIIASYSQKSVAPGEEPRQIMKSFWAVACILLPASLIFSQSTLMHLKSLAIIAAFPLALIMLCVVASFFKELRAEVTS
SIO_010081: TPCCA_RS00520
subclass of: SO_0000673
so part of: TPCCA_RS00520
location: complement(118775..120307)
location: region:118775-120307:-1
so has part: feature:118775-120307:-1:exon

WP_013944811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118775-120307:-1:exon

TPCCA_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00525
old locus tag: TPCCA_0107
so part of: sequence
location: complement(120288..122099)
location: region:120288-122099:-1
so has part: feature:120288-122099:-1:exon
subclass of: SO_0000010

position:120288:-1
position: 120288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122099:-1
position: 122099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120288-122099:-1:exon

TPCCA_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00525
old locus tag: TPCCA_0107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505410.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphotransferase
translation: MRRRFFQIFQLLRDAPRLCQRDIAKALRLSLAYTNRLLHAMKSAGLLETHGTFGARTRSLTPLAHSQYQSCRVHNAVIMAAGFGSRCVPLTYATPKGLLKVFGEPMIERQIRQLHEVGITDITVVVGYLKEAFEYLVDKHDVTLTYNPDYETANNLSTLYHARHLLRNTYILSSDNWLRENIYHSHEWDSWYAAVKTQGKTKEWVLKTGLYDKITAVKIGGRSGWIMYGPAYFSASFSKKIIPLIEAAYMRPENRAWFWEDVFMRNTKSLTMFANKQADNLIYEFESLDELRKFDFAYMVSSDNEWMRVISHVFNQPEMTIGKLRPLKAGMTNKSFIFELNDKPYLFRIPGEGTELLVNRFQEAAVYEAIKPLNICDTLVHLEPARGIKITVFHKDCRSANPSDPADLDLCMRIARKLHQSGICVAHRFDFRSRIAYYEKLALDQYSILYADYRSVREKMNTLLAIVDSVDKPCVLTHVDLTPDNFLLCDGSAQLIDWEYAGMCDPLVDIAMFSLYAHFNTAQIEDLMYRYFQRNPHGEERLRVFCYIALGGFLWSLWTSYKQALGISFGDYGLKMYRYAKEYYEAVQTLLKTHRADHAERKM
SIO_010081: TPCCA_RS00525
subclass of: SO_0000673
so part of: TPCCA_RS00525
location: complement(120288..122099)
location: region:120288-122099:-1
so has part: feature:120288-122099:-1:exon

WP_144011655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120288-122099:-1:exon

TPCCA_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00530
old locus tag: TPCCA_0108
so part of: sequence
location: complement(122219..123604)
location: region:122219-123604:-1
so has part: feature:122219-123604:-1:exon
subclass of: SO_0000010

position:122219:-1
position: 122219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123604:-1
position: 123604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122219-123604:-1:exon

TPCCA_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00530
old locus tag: TPCCA_0108
EC number: 2.7.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881557.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent 6-phosphofructokinase
translation: MAHLPKEYDFSIESLGESKIPSPIYLSHTLGDFIPNYVSDNEYISHELSAHLGETVGPFTHKNLMERAGPRQKIFFNPHHVHAGIVTCGGLCPGLNDVIRAIVRCLWGRYGVKRISGIRFGYKGLLPDYNFDILPLTPEVIDNCHKTGGSLLGTSRGGGNRVVDIVDGIERLNLHILFIIGGDGSQKGAKEIADEIKHRNLKISIIGIPKTVDNDISFVQKSFGFDTAIVKATEAVAAAHMEARSQINGIGLVKLMGRESGFIATYTAIASHETNFVLIPEVSFDLDGPNGLLAHLEKRIALRKHAVLVVAEGAGQDLMVNADGVPSGDSQGGSLRVSSGTDASGNKRLADIGLFLKEKIEVYFKEKRIHTNLKYIDPSYLIRSAVAAPIDSIYCERLGNNAVHAAMCGKTKMIIGLVHNKFVHLPIDVVVCQRKHVNPEGSLWRDALDATGQPIVMKNII
SIO_010081: TPCCA_RS00530
subclass of: SO_0000673
so part of: TPCCA_RS00530
location: complement(122219..123604)
location: region:122219-123604:-1
so has part: feature:122219-123604:-1:exon

WP_013944813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122219-123604:-1:exon

TPCCA_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rlmB
locus tag: TPCCA_RS00535
old locus tag: TPCCA_0109
so part of: sequence
location: complement(123706..124584)
location: region:123706-124584:-1
so has part: feature:123706-124584:-1:exon
subclass of: SO_0000010

position:123706:-1
position: 123706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124584:-1
position: 124584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123706-124584:-1:exon

TPCCA_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rlmB
locus tag: TPCCA_RS00535
old locus tag: TPCCA_0109
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944814.1
GO function: GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO process: GO:0009451 - RNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
translation: MVISGLRAIEEFLRAQPAAPEGLHAGGKNSKTQQSCVRVLTLYYAAENARIKRLLGMAAARGIRITHTTCAVLDKLARSLPPALRDHRGILAVLSSPSATPQGSHTRKKQPAVDSSQERTLLHALATHTHALVLVLDAITDPHNVGAIVRSADQFSVDAVLLPHHHGAGGTETIARVSAGAVAWVPLVRVRNLVRTAGILKRSGFWLYGADVAGEAIGARTFPPKTALVLGNEGHGVSPLLRTHCDALISIPTQGNVDSLNVSVAAGILLYEIRRSQQSPYSVQRQNEMNAQ
SIO_010081: TPCCA_RS00535
subclass of: SO_0000673
so part of: TPCCA_RS00535
location: complement(123706..124584)
location: region:123706-124584:-1
so has part: feature:123706-124584:-1:exon

WP_013944814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123706-124584:-1:exon

TPCCA_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00540
old locus tag: TPCCA_t0006
so part of: sequence
location: 124844..124914
location: region:124844-124914:1
so has part: feature:124844-124914:1:exon
subclass of: SO_0000663

position:124844:1
position: 124844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124914:1
position: 124914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124844-124914:1:exon

TPCCA_RS00540
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS00540
old locus tag: TPCCA_t0006
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:124876..124878,aa:Gln,seq:ctg)
SIO_010081: TPCCA_RS00540
subclass of: SO_0000673
so part of: TPCCA_RS00540
location: 124844..124914
location: region:124844-124914:1
so has part: feature:124844-124914:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124844-124914:1:exon

TPCCA_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00545
old locus tag: TPCCA_t0007
so part of: sequence
location: 124924..124995
location: region:124924-124995:1
so has part: feature:124924-124995:1:exon
subclass of: SO_0000663

position:124924:1
position: 124924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124995:1
position: 124995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124924-124995:1:exon

TPCCA_RS00545
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS00545
old locus tag: TPCCA_t0007
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:124957..124959,aa:Glu,seq:ttc)
SIO_010081: TPCCA_RS00545
subclass of: SO_0000673
so part of: TPCCA_RS00545
location: 124924..124995
location: region:124924-124995:1
so has part: feature:124924-124995:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124924-124995:1:exon

TPCCA_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00550
old locus tag: TPCCA_t0008
so part of: sequence
location: 125032..125103
location: region:125032-125103:1
so has part: feature:125032-125103:1:exon
subclass of: SO_0000663

position:125032:1
position: 125032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125103:1
position: 125103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125032-125103:1:exon

TPCCA_RS00550
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS00550
old locus tag: TPCCA_t0008
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:125065..125067,aa:Glu,seq:ctc)
SIO_010081: TPCCA_RS00550
subclass of: SO_0000673
so part of: TPCCA_RS00550
location: 125032..125103
location: region:125032-125103:1
so has part: feature:125032-125103:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125032-125103:1:exon

TPCCA_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00555
old locus tag: TPCCA_0110
so part of: sequence
location: 125146..126858
location: region:125146-126858:1
so has part: feature:125146-126858:1:exon
subclass of: SO_0000010

position:125146:1
position: 125146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126858:1
position: 126858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125146-126858:1:exon

TPCCA_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00555
old locus tag: TPCCA_0110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342271.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5312 domain-containing protein
translation: MNEQLSTFDKLVETLSTEDAQRMLADIGKALRTSEANAETPAKVKKKRAFARWDTREDSLAGETFFFRFWIGVKSFFRSSSVEALYEETLLQRLGNDLKAHYAQYIDVKEKTFTKVFYDKMGELRKTQVFFDSLLACYNSDKGDFYLLLSSFITPVAYEQLMACSDPFAAQGDGTPSGLRASLLKRMDVALATLSGPHKTELYQAARAIEWMKVFCEVPVDRILLRFTVISPASAVCPITILQSELEKLACVIHDSKHIPDAVLQGLFVLKSKTSLHDAQVDNAAHAAAFLKEASAALVVIKDLSHSIPIEDFVRFAGRNIRWQPRAIAGGEDWFVHFKNAWKKRFNEKWALWSTAQKRLVLKEQMLSLLGREQFSELTHRPWEGFWYQLVFRREMSFVFLKNLFEDAYARVVSPPLNVILAEGSFYRRDELIEYTDAVNVLEQMGAKIRNFEVRLSPVGEWGVAFSAQRKEHTVTMKSKGILEALIKVIDSEATVLLDATLKAFHCIGAMLASMIGASKTSAYATLTNWSDIRGSDNASFREQASQARAYVQTASRALVEMENLETTHL
SIO_010081: TPCCA_RS00555
subclass of: SO_0000673
so part of: TPCCA_RS00555
location: 125146..126858
location: region:125146-126858:1
so has part: feature:125146-126858:1:exon

WP_245522149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125146-126858:1:exon

TPCCA_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpoN
locus tag: TPCCA_RS00560
old locus tag: TPCCA_0111
so part of: sequence
location: 126918..128345
location: region:126918-128345:1
so has part: feature:126918-128345:1:exon
subclass of: SO_0000010

position:126918:1
position: 126918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128345:1
position: 128345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126918-128345:1:exon

TPCCA_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpoN
locus tag: TPCCA_RS00560
old locus tag: TPCCA_0111
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881560.1
GO function: GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase factor sigma-54
translation: MQQLVQQQRLVLNQRLVHGLCLLQLSRGDLKTEVLRAVQRNPLLEIRPSSARHTGKACYLSLGDRRERMRARDRFQQLLENQPDKQVDNIRAVLREQVFYQKHEAIVLDLACAFIQMLDDHGFFSISPAIFQNMCGSMPTALQEKIPQAIALIQRLEPQGCAVFSFKESLAVQARLRFERFSDPLYRCVINLLTHHSELLFCSDNVCDGRVSVHALTTQINSMGLCVQKVSSNDVKDILLLIKELHPFPGKCVSNAQRADTNMLLEPDVLITKTAHGFVTQINCTGIPTVVFRNDYCMHSKAAEKNHALKACMHDALSLVSMLSYRERTLLDIAKTIVHYQCGFFDHGPAKLTPLRMTDVAHRTGLSVSTVSRIVRDKWLQYGSQHFSLRYFFSPRVLSTEEYRDRSSLGQNYPSSPHSKVSVKHRISRLIQEARTQRISLSDRRIAQLLGEQGIKCARRTVNKYRSELRTCSSS
SIO_010081: TPCCA_RS00560
subclass of: SO_0000673
so part of: TPCCA_RS00560
location: 126918..128345
location: region:126918-128345:1
so has part: feature:126918-128345:1:exon

WP_193386051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126918-128345:1:exon

TPCCA_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00565
old locus tag: TPCCA_0112
so part of: sequence
location: complement(128342..129697)
location: region:128342-129697:-1
so has part: feature:128342-129697:-1:exon
subclass of: SO_0000010

position:128342:-1
position: 128342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129697:-1
position: 129697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128342-129697:-1:exon

TPCCA_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00565
old locus tag: TPCCA_0112
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881561.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminopeptidase C
translation: MMYLTKELLDTFAHEVAADPIHKAVAGAVARVGLEEAALNTEVARQHTHIFSTETKRGEMTNQKMSGRCWIFAALNAARVSTMKKLDIETVEFSQNYLFFWDKLEKANFFLENILETLDEPLTSRLMAHLLANPVQDGGQWDMFSGLLEKYGLVPKECMPETFHSSNSRVLLSVLTRRLRKHAQLLRSAHEEGVALHTLREKKEAFLSSIYSILVKALGRPPEKFDFVYKDKEKKFHKVRDLTPQKFFCDFVGWDLKNKVSLIHAPTADKPFGRAYTVKFLGTVKEAPCICYVNTPIEVLKEATASAIRAGEPVWFGCDVGQMMTRKDGIMDTEIFGYESMLGTTPEFNKAERLDYGESLLTHAMVITGFDEDAQGNPVRWQVENSWGDDTGKKGMFSMSDRWFDEYLYQITIDKKFVPQVWLDALEKPIIALEPWDPMGALADTPLYLKN
SIO_010081: TPCCA_RS00565
subclass of: SO_0000673
so part of: TPCCA_RS00565
location: complement(128342..129697)
location: region:128342-129697:-1
so has part: feature:128342-129697:-1:exon

WP_013944818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128342-129697:-1:exon

TPCCA_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: hflK
locus tag: TPCCA_RS00570
old locus tag: TPCCA_0113
so part of: sequence
location: 129836..130822
location: region:129836-130822:1
so has part: feature:129836-130822:1:exon
subclass of: SO_0000010

position:129836:1
position: 129836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130822:1
position: 130822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129836-130822:1:exon

TPCCA_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: hflK
locus tag: TPCCA_RS00570
old locus tag: TPCCA_0113
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881562.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0045861 - negative regulation of proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FtsH protease activity modulator HflK
translation: MRIPKWTPATWSVVAGCIGGVLGIVIVGIASPIRIISPTDNGVVTRFGKYHRTLEPGLHYLIPFVERVYKVPVTKVQKEEFGFRTSKSSEQSHYVNNISHESLMLTGDLNIVDVEWVVQYRIVDPRAWVFNVESQERRQTIRDISKAVVNSLIGDRAILDIMGPERSAIQMRAKDMMNVLLKRIGLGVLVSSVQLQNVVPPQEVQQAFEDVNIAIQDMNRLINEGKESYNREIPKARGDADKLIQEAMGYANERVNRAKGDVARFDSIYAEYVKAPHVTKTRLYLEGLGAILEKTENVLLIDKKLENLLTLKDISKVSKKVVAGTREE
SIO_010081: TPCCA_RS00570
subclass of: SO_0000673
so part of: TPCCA_RS00570
location: 129836..130822
location: region:129836-130822:1
so has part: feature:129836-130822:1:exon

WP_013944820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129836-130822:1:exon

TPCCA_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: hflC
locus tag: TPCCA_RS00575
old locus tag: TPCCA_0114
so part of: sequence
location: 130827..131822
location: region:130827-131822:1
so has part: feature:130827-131822:1:exon
subclass of: SO_0000010

position:130827:1
position: 130827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131822:1
position: 131822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130827-131822:1:exon

TPCCA_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: hflC
locus tag: TPCCA_RS00575
old locus tag: TPCCA_0114
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881563.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0045861 - negative regulation of proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protease modulator HflC
translation: MRKRGLQVHARVRPVLNIGIVVGVLLGGVVLLQPFYLIQEGQVALITQFGEIIKTNNTAGLYVRAPFLHHVHKYTAKLLRVDGDPQKIPTKEKQFIEVDTTSRWRIEDVKKFYQSLGTYEAAYSRISDIIDSSVRDIITVNGLDDVVRSTNAINESNHSEQFDVPVSQLAFDRGAEKTAHMTIEKGRESLAREISQAANDQLKDFGIVVVDVIFKGIKYSDELQASVFNRMVKERNQIAQMFRSTGEGKKAEWLGKLDNEKRSLLSKAYEEAERIKGEADARAAAVYAQSYGKSPEFYGFWKSLEVYKKSLPDTEKILSTDLEYFKHLYQH
SIO_010081: TPCCA_RS00575
subclass of: SO_0000673
so part of: TPCCA_RS00575
location: 130827..131822
location: region:130827-131822:1
so has part: feature:130827-131822:1:exon

WP_010881563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130827-131822:1:exon

TPCCA_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: thiD
locus tag: TPCCA_RS00580
old locus tag: TPCCA_0115
so part of: sequence
location: complement(131847..132656)
location: region:131847-132656:-1
so has part: feature:131847-132656:-1:exon
subclass of: SO_0000010

position:131847:-1
position: 131847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132656:-1
position: 132656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131847-132656:-1:exon

TPCCA_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: thiD
locus tag: TPCCA_RS00580
old locus tag: TPCCA_0115
EC number: 2.7.1.49
EC number: 2.7.4.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881564.1
GO function: GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
translation: MLKLLSIGGSDASGGAGIEADLKTFQEYGAFGVATLTAIVTMDPSRNWSHRVHSLEEDCVRDQLETAFAGVGVSAVKSGMLASVHAIECVAEYLERFAVAAYVFDPVMVCKGSGDALHRELNELMIQKLLPRATVVTPNLFETAQIAGISVPRTVDEMKEGARLIHERGASHVFVKGGGRLPGCKHALDVFYDGKTFHLVEDELVQSGWNHGAGCTVSAAITAGLGRGLTAYDAILSAKRFVTTGLRHGFQVNQWVGTGNLSKWRDRFH
SIO_010081: TPCCA_RS00580
subclass of: SO_0000673
so part of: TPCCA_RS00580
location: complement(131847..132656)
location: region:131847-132656:-1
so has part: feature:131847-132656:-1:exon

WP_013944821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131847-132656:-1:exon

TPCCA_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: uvrB
locus tag: TPCCA_RS00585
old locus tag: TPCCA_0116
so part of: sequence
location: 132808..134814
location: region:132808-134814:1
so has part: feature:132808-134814:1:exon
subclass of: SO_0000010

position:132808:1
position: 132808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134814:1
position: 134814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132808-134814:1:exon

TPCCA_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: uvrB
locus tag: TPCCA_RS00585
old locus tag: TPCCA_0116
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342273.1
GO component: GO:0009380 - excinuclease repair complex [Evidence IEA]
GO function: GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO process: GO:0006289 - nucleotide-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excinuclease ABC subunit UvrB
translation: MKEFRLHASFQPAGDQIAAIDALVRGLHAGARFQTLKGVTGSGKTFTVANVIARVQKPTLVISHNKTLSAQLYREFKGFFPDNAVEYFVSYYDYYQPESYVPARDLYIEKDASINAEINRMRLSATFSLMERRDVIVVATVSCIYGLGLPESWRDLRIHVEVNQCLDLEDLKRQLVSLQYERNDAVLECGRFRVRGDVIEIFPAYLEEFYRIECDWDRVVRIRRIHPVSGAVLREFEELTVYPAKHFVLKEDAIPRAMDRIRQELDERLVQLTQENKLAEAARLKTRTEYDLEMLGEMGYCHGIENYSAPIAGRKSGEPPVTLLHYFPKDFVLFVDESHVTLPQLGAMYEGDRVRKQNLIDFGFRLPCARDNRPLKDSEFEALLNQAVFISATPGVKERTQSVQIVEQLIRPTGLLDPCVEVRKTDGQIEDICQRVKACSARNERSLVLTLTKKMAEDLTDYFNGLGIRTKYVHSEIETIERVEILTSLRAGEFEVLVGINLLREGIDLPEVAFIAILDANIVGFLRSTTSLIQIIGRAARNARGTVVMYADAISDAMREAIEETARRRKIQMAYNRAHGITPRTIKKSIEDILVREQEVKKDAARVQVAPLLRAADADVRTHAARKKMVQALRLHMKVCARELRFEEAALIRDKILQLQRQDEQNGV
SIO_010081: TPCCA_RS00585
subclass of: SO_0000673
so part of: TPCCA_RS00585
location: 132808..134814
location: region:132808-134814:1
so has part: feature:132808-134814:1:exon

WP_013944822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132808-134814:1:exon

TPCCA_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00590
old locus tag: TPCCA_0117
pseudo: true
so part of: sequence
location: complement(134846..136637)
location: region:134846-136637:-1
so has part: feature:134846-136637:-1:exon
subclass of: SO_0000010

position:134846:-1
position: 134846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136637:-1
position: 136637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134846-136637:-1:exon

TPCCA_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00590
old locus tag: TPCCA_0117
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016480005.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: major outer sheath N-terminal domain-containing protein
SIO_010081: TPCCA_RS00590
subclass of: SO_0000673
so part of: TPCCA_RS00590
location: complement(134846..136637)
location: region:134846-136637:-1
so has part: feature:134846-136637:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134846-136637:-1:exon

TPCCA_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00595
old locus tag: TPCCA_0118
so part of: sequence
location: complement(136716..137981)
location: region:136716-137981:-1
so has part: feature:136716-137981:-1:exon
subclass of: SO_0000010

position:136716:-1
position: 136716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137981:-1
position: 137981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136716-137981:-1:exon

TPCCA_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00595
old locus tag: TPCCA_0118
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944823.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFADKSLSALNAACQRAQQDLQSHCCSLGEHIVRGGAACDISKLGVQDTDISRCHALQRQRDQVAESILDIKSILQRQEELAALGKRVSKVLHRHARQERDVLRSFVAQYYATYAHVGLPALEPIYARTAELESTLQDLRAKRDQLLETCTFGSILERVGLQAKSAVVQRRIRVLEAKIQKIITLCTPDVIAHPDVERMYHAGEFSSALSAAYARLISDRGVYASNLQHSQELMDEQEALDARLRALDCGAKPLKRVAAFTAQVSELDEDINALCAHIGAAYASCFFTEEGFAQPPLSQKTRLTVPDELSTLLRTVAEARMRVARAGYQVECAKLRQKLQSEQRVCESFCRSIEEYRRGIKEYEAMIESAQQNVALSKATVARLAQSLEEASERLALFETSPEPIVLSSEVLSVPQEKASV
SIO_010081: TPCCA_RS00595
subclass of: SO_0000673
so part of: TPCCA_RS00595
location: complement(136716..137981)
location: region:136716-137981:-1
so has part: feature:136716-137981:-1:exon

WP_013944823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136716-137981:-1:exon

TPCCA_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00600
old locus tag: TPCCA_0119
so part of: sequence
location: complement(138079..138738)
location: region:138079-138738:-1
so has part: feature:138079-138738:-1:exon
subclass of: SO_0000010

position:138079:-1
position: 138079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138738:-1
position: 138738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138079-138738:-1:exon

TPCCA_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00600
old locus tag: TPCCA_0119
EC number: 7.4.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881568.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine ABC transporter permease
translation: MANQTLWLLVARATGQTSLMVCASASIALAAGTPLGILLCVMSPGHVWAHPAWHRVLSSSMNVLRAFPFVILLVVLLPLSRMLTGRTVGTAAAILPLAIAALPFVARVIESALLEVEPGIIQAAVAMGSSMRQLVLKIMLPEAAPACVSGVALMVINLIGYSAMAGAIGGGGLGDVAIRYGYQRFQPEVMTMAVLAILAQVALTQWIGRIICTRIRARR
SIO_010081: TPCCA_RS00600
subclass of: SO_0000673
so part of: TPCCA_RS00600
location: complement(138079..138738)
location: region:138079-138738:-1
so has part: feature:138079-138738:-1:exon

WP_010881568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138079-138738:-1:exon

TPCCA_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00605
old locus tag: TPCCA_0120
so part of: sequence
location: complement(138738..139547)
location: region:138738-139547:-1
so has part: feature:138738-139547:-1:exon
subclass of: SO_0000010

position:139547:-1
position: 139547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138738-139547:-1:exon

TPCCA_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00605
old locus tag: TPCCA_0120
EC number: 7.4.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881569.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine ABC transporter ATP-binding protein
translation: MVRLERLKKTYAGVPILRDISLEIPAHGMYGIIGKSGAGKSTLLRIMSLLEKPDEGAVFYHTTRVDLLRGAALRAQRRRIGLIFQQFHLFSSRTVFGNVAYPLEIARYARKDAYARVLHLLHLVGLADKAQARISTLSGGQKQRVAIARALAAEPAILFCDEATSALDPQTTQSILTLLKNVQCSLRLTVVLITHQMEVVRDLCDRAAVLHEGEIVEEGRVTQLFAAPRRLITQQLLSGCSFASFAKSEPFHRMSSGACAVHAIDKAHW
SIO_010081: TPCCA_RS00605
subclass of: SO_0000673
so part of: TPCCA_RS00605
location: complement(138738..139547)
location: region:138738-139547:-1
so has part: feature:138738-139547:-1:exon

WP_010881569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138738-139547:-1:exon

TPCCA_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00610
old locus tag: TPCCA_0121
so part of: sequence
location: 139685..140746
location: region:139685-140746:1
so has part: feature:139685-140746:1:exon
subclass of: SO_0000010

position:139685:1
position: 139685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140746:1
position: 140746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139685-140746:1:exon

TPCCA_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00610
old locus tag: TPCCA_0121
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342276.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KamA family radical SAM protein
translation: MAECTREQRKRRGAGRADEHWRTLSPASCAADALTEHISPAYAHLIAQAQGADAQALKRQVCFAPQERVVHACECADPLGEDRYCVTPFLVHQYANRVLMLATGRCFSHCRYCFRRGFVAQRAGWIPNEEREKIITYLRATPSVKEILVSGGDPLTGSFAQVTSLFRALRSVAPDLIIRLCTRAVTFAPQAFTPELIAFLQEMKPVWIIPHINHPAELGSTQRAVLEACVGAGLPVQSQSVLLREVNDSVETLCTLFHALTCLGVKPGYLFQLDLAPGTGDFRVPLSDTLALWRTLKERLSGLSLPTLAVDLPGGGGKFPLVALALQQDVAWHQEREAFSARGIDGAWYTYPF
SIO_010081: TPCCA_RS00610
subclass of: SO_0000673
so part of: TPCCA_RS00610
location: 139685..140746
location: region:139685-140746:1
so has part: feature:139685-140746:1:exon

WP_013944824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139685-140746:1:exon

TPCCA_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00620
old locus tag: TPCCA_0122
so part of: sequence
location: complement(140965..142821)
location: region:140965-142821:-1
so has part: feature:140965-142821:-1:exon
subclass of: SO_0000010

position:140965:-1
position: 140965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142821:-1
position: 142821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140965-142821:-1:exon

TPCCA_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00620
old locus tag: TPCCA_0122
EC number: 4.1.1.32
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944825.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0004611 - phosphoenolpyruvate carboxykinase activity [Evidence IEA]; GO:0017076 - purine nucleotide binding [Evidence IEA]
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate carboxykinase (GTP)
translation: MELHEIAHARAKAWIEEMVALCAPDTVYVCDGSKKEYDTIMQKMVDAGLATPLKKRKNCFLFRSQPSDVARVEARTFIASKREDDAGPTNHWTDPAELKKTMTGLYSQCMKGRTMYVIPFSMGPVGSPISKNGIEITDSEYVVCNMHIMTRVGTRVLEALGTDGEFVPCLHSVGKPLGPGVTDAGQWPCADMERKYISHFPEERLVWSFGSGYGGNALLGKKCFALRIASVLARDEGWLAEHMLILKITNPAGKTKYIGAAFPSACGKTNLAMMIPTLPGWKVETVGDDIAWMKFGKDGRLYAINPEAGFFGVAPGTSDFSNKNAMDSIKENAIFTNCGLTEDGDVWWEGIGYPAKGTIIDWHGVSRPAPTRDKSPKGEEIAHPNARFTAPARQCPAIASNWEDPEGVPIDAFLFGGRRPSTVPLVHQARDWNHGVFLGSIIGSEVTAAVISDQVGQIRRDPFAMLPFCGYHMADYFSHWIKLGSQARAENLPKIFCVNWFRKDAEGDFLWPGYGDNSRVLAWIFDRCDGVDNAVETAIGWMPKEGALNTEGLNVSTQAVKELLSVDIAGWKKEIKDIRENHYPKFGARLPQQLRDALEVLEARINGSEGAACTRDMC
SIO_010081: TPCCA_RS00620
subclass of: SO_0000673
so part of: TPCCA_RS00620
location: complement(140965..142821)
location: region:140965-142821:-1
so has part: feature:140965-142821:-1:exon

WP_013944825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140965-142821:-1:exon

TPCCA_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00625
old locus tag: TPCCA_0123
so part of: sequence
location: 142927..145497
location: region:142927-145497:1
so has part: feature:142927-145497:1:exon
subclass of: SO_0000010

position:142927:1
position: 142927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145497:1
position: 145497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142927-145497:1:exon

TPCCA_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00625
old locus tag: TPCCA_0123
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881572.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLSPQGADMSGVLYLGRFTLCLLPVSCFSQKVMTCADTVRGAQEVFMLCIYVELPYYYQLTRIFPADIESLCARMKRFAVHNGAALHEASSVRIFAFEAHSLGSVYAAVRCVRALYQTLDTYEKQVKEFRILMDVVADDASPCLIEDRFYAYRSTLIPDRGFFASFRAKQLLKHYLEFLPLPALNIYQVNGFLSLCAEKPFPQEVTTHCIVVRTTSSYMSALCNFMALHPLSEAVYSTLSEETRAFFFHLRAAVSFFKRRRYDSSFPQYLTDAFLQYVGLYFKLYYEAAPNAAPPPIYVDPCAGHESQKQAEKVLIVSPHSPLMRLPASCADIEAIPQDLAEVMYTLSLASRYIFADEIEEFFLFLKKHADFVGDLFDKMFCTQVTMVPHNAYAIPEDVHDSLEKRVRVKMPVIRECISSFLWKKYQEGSLCASTDLLRTFQELQYKYTSDCVLHSLFHTYSDVQIAHLQVEEYTGTDVGAVLKVYQHTLLVGMREDAEAAFREAKACLTTLQARRFVSAEYRTFSLLGFLTIGQSKFEDALVYFGYALDDAEQLRDGDFLCSALFHLSITYFLQHNFTQARLFLSKLSDAISTYFEQRWKTVSLFMQGRISLSLGEYAQARRCFDEAADFALQYFEHQEPLCRVWAAHARLLADKSYAAHALFQDMCDQYPDAYLFLVESYVRAEYFDDPTLFQSFPEETTSREPCVPSFSLDTPIYSGFSCAEDLVWGRQCAFAVSTQHSTVFAHYYHCRVHLHRAEDMQTFHHHKQKLEAIARRAFQIGDPSAALFLYLCYDVSYRVHGAEAAVTTAHLSRAFKVMQRSVAYMSENTVRAQFMQDNFWNAKLFAAAQANKLI
SIO_010081: TPCCA_RS00625
subclass of: SO_0000673
so part of: TPCCA_RS00625
location: 142927..145497
location: region:142927-145497:1
so has part: feature:142927-145497:1:exon

WP_193386052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142927-145497:1:exon

TPCCA_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: ychF
locus tag: TPCCA_RS00630
old locus tag: TPCCA_0124
so part of: sequence
location: 145511..146617
location: region:145511-146617:1
so has part: feature:145511-146617:1:exon
subclass of: SO_0000010

position:145511:1
position: 145511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146617:1
position: 146617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145511-146617:1:exon

TPCCA_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: ychF
locus tag: TPCCA_RS00630
old locus tag: TPCCA_0124
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944827.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: redox-regulated ATPase YchF
translation: MAVNCGIIGLPNVGKSTIFSALTANVVEAANYPFCTIEPNVGMVTVPDVRLEALAGHFRPKKTVYASIECVDIAGLVKGASQGEGLGNRFLAHVREVGVLAHVVRCFEHTDVVHVHNKVDPLSDIETVHIELALADLASVEKRAARAQKESRMGKSLQKESTLVLRALDTLREYLEMGKAACMAPLSDEERNAVRDMRLLTMKPHLYVCNTDESGMQYGNDFVRAVQEHARVHNTQAIVMCGKFEAELAQLSDVAEQNAFLQELGLRESGRAALARAVYSLMGLRTFFTAGPEECRAWTIRAGLRAPHAAGVIHSDLERGFIRAETYSFDDLASCGSVAKVREANRVRQEGKEYEVQDGDVIFFKFNV
SIO_010081: TPCCA_RS00630
subclass of: SO_0000673
so part of: TPCCA_RS00630
location: 145511..146617
location: region:145511-146617:1
so has part: feature:145511-146617:1:exon

WP_013944827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145511-146617:1:exon

TPCCA_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00635
old locus tag: TPCCA_0125
so part of: sequence
location: 146694..147488
location: region:146694-147488:1
so has part: feature:146694-147488:1:exon
subclass of: SO_0000010

position:146694:1
position: 146694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147488:1
position: 147488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146694-147488:1:exon

TPCCA_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00635
old locus tag: TPCCA_0125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881574.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease III
translation: MRPVQRIISWNVNGIRAIERKDFLSWLAREAPDVLCLQEIKAHESQLSAALRAPVWSAGAGGTYYTYFHSAQRPGYSGTALFSKRAPDAVRFFGVPAFDCEGRMLAARFGELTVVSAYFPNAQEGGKRLAYKLDFCAAFRAFCDEERTAGQHVILCGDYNIAHKEIDLAHPQENEGNPGFLPQERAWMDTFTEAGYADSFRAFCTEGQQYTWWSYRARARARNIGWRIDYQCVDQAFLARVTSSQILSEVTGSDHCPVCLTYAD
SIO_010081: TPCCA_RS00635
subclass of: SO_0000673
so part of: TPCCA_RS00635
location: 146694..147488
location: region:146694-147488:1
so has part: feature:146694-147488:1:exon

WP_010881574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146694-147488:1:exon

TPCCA_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00640
old locus tag: TPCCA_0125a
so part of: sequence
location: complement(147552..148223)
location: region:147552-148223:-1
so has part: feature:147552-148223:-1:exon
subclass of: SO_0000010

position:147552:-1
position: 147552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148223:-1
position: 148223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147552-148223:-1:exon

TPCCA_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00640
old locus tag: TPCCA_0125a
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342713.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQLKWWAVGPVLGICAGVWGAAHPVHADPWDTTAAGRSTIRLSAMGAVPLFQVDWCNSGRGDDRNANAQTNGHKYIYPAFSAALGFEHFVCRGLSLGIDASVQYHCSYPNSTYSPTTPYYYLAIPVALTAGYTVAFWRIRLPLTVGAGFNYQHYYTSTYYGLVLKAAAGCYFQLTEHWSLGVSATYSGVPRSCEKIIEEDRQQTNTRTAQFIAAGVDVRYHL
SIO_010081: TPCCA_RS00640
subclass of: SO_0000673
so part of: TPCCA_RS00640
location: complement(147552..148223)
location: region:147552-148223:-1
so has part: feature:147552-148223:-1:exon

WP_013944828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147552-148223:-1:exon

TPCCA_RS05590
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05590
old locus tag: TPCCA_0126a
so part of: sequence
location: complement(148753..149154)
location: region:148753-149154:-1
so has part: feature:148753-149154:-1:exon
subclass of: SO_0000010

position:148753:-1
position: 148753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149154:-1
position: 149154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148753-149154:-1:exon

TPCCA_RS05590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05590
old locus tag: TPCCA_0126a
inference: COORDINATES: protein motif:HMM:NF014743.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: major outer sheath C-terminal domain-containing protein
translation: MGHKKENAANVNGTVSAGTRALHPKMVAPETSSMESRAQKTQFHPDGEGKSNTGAARAGRNHSAAFARYAPALTKWSKGYCGYYECGVVVSPLEKVEVRLSWEQGKLQENSNVVIEKNVTERWQFVGACRLIW
SIO_010081: TPCCA_RS05590
subclass of: SO_0000673
so part of: TPCCA_RS05590
location: complement(148753..149154)
location: region:148753-149154:-1
so has part: feature:148753-149154:-1:exon

WP_013944830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148753-149154:-1:exon

TPCCA_RS05595
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05595
old locus tag: TPCCA_0126b
so part of: sequence
location: complement(149144..149617)
location: region:149144-149617:-1
so has part: feature:149144-149617:-1:exon
subclass of: SO_0000010

position:149144:-1
position: 149144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149617:-1
position: 149617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149144-149617:-1:exon

TPCCA_RS05595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05595
old locus tag: TPCCA_0126b
inference: COORDINATES: protein motif:HMM:NF014743.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: major outer sheath C-terminal domain-containing protein
translation: MKLWGMCALVATDVGHKRNVRAQAQAADALLTLGYRWFSAGGYFASKASNVFKDVFLARNMDMQTHDCATYIKLETKSGDPYTHLLTGLNAGVEARVYMPVHWKARAAAPPGAPDKILDFYSPAHESPVSHHRARIFGGVFLTNNMLQHDCAVRRGA
SIO_010081: TPCCA_RS05595
subclass of: SO_0000673
so part of: TPCCA_RS05595
location: complement(149144..149617)
location: region:149144-149617:-1
so has part: feature:149144-149617:-1:exon

WP_245522150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149144-149617:-1:exon

TPCCA_RS05600
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05600
pseudo: true
so part of: sequence
location: <149719..>149974
location: region:149719-149974:1
so has part: feature:149719-149974:1:exon
subclass of: SO_0000010

position:149719:1
position: 149719
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:149974:1
position: 149974
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149719-149974:1:exon

TPCCA_RS05600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881577.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: TPCCA_RS05600
subclass of: SO_0000673
so part of: TPCCA_RS05600
location: <149719..>149974
location: region:149719-149974:1
so has part: feature:149719-149974:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:149719-149974:1:exon

TPCCA_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00665
old locus tag: TPCCA_0131
pseudo: true
so part of: sequence
location: complement(150800..152591)
location: region:150800-152591:-1
so has part: feature:150800-152591:-1:exon
subclass of: SO_0000010

position:150800:-1
position: 150800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152591:-1
position: 152591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150800-152591:-1:exon

TPCCA_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00665
old locus tag: TPCCA_0131
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016480005.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: major outer sheath N-terminal domain-containing protein
SIO_010081: TPCCA_RS00665
subclass of: SO_0000673
so part of: TPCCA_RS00665
location: complement(150800..152591)
location: region:150800-152591:-1
so has part: feature:150800-152591:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:150800-152591:-1:exon

TPCCA_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00675
old locus tag: TPCCA_0133
so part of: sequence
location: complement(152831..154078)
location: region:152831-154078:-1
so has part: feature:152831-154078:-1:exon
subclass of: SO_0000010

position:152831:-1
position: 152831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154078:-1
position: 154078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152831-154078:-1:exon

TPCCA_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00675
old locus tag: TPCCA_0133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342715.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNGSNPTLPLLPRVRRGRRRARTAVRATVCLCGTSLLTTCDFSGIFATIQQEVAIKSPSIPGAIYGLVKAGGKLYATNGRLWEKDPSGTEWKPVSCFDSVIGGSRITSLAADNGGNGVLVACIPGKGAYKWQHKDCQTNGSLSALSGTEKALSVVGTGTSGVYLLNHTDDKVGETSTSNGTTALGEMNEFCLHAGNGFLVTTKKVCVGGDSTVAKSDGEEPVPPILAATDDGSGHVYILTKDKVYCKKVNQSEKKIQDCPQSAAAAAPAPAGAHSVAHKVADAHSIAFFKNGNDEFLLIGGRQGYGEIKLERSSGSSGNGAQCVHLKEQNVHDQTGWDEKSSTPKRSAEQYRSTIGRWAVSGIYVIEKKPGGGRKKRDTSANCERPDLYVAVGDTNDTYTGLWKFDTTTNTWNRE
SIO_010081: TPCCA_RS00675
subclass of: SO_0000673
so part of: TPCCA_RS00675
location: complement(152831..154078)
location: region:152831-154078:-1
so has part: feature:152831-154078:-1:exon

WP_144011656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152831-154078:-1:exon

TPCCA_RS05530
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05530
old locus tag: TPCCA_0133b
so part of: sequence
location: 154325..155011
location: region:154325-155011:1
so has part: feature:154325-155011:1:exon
subclass of: SO_0000010

position:154325:1
position: 154325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155011:1
position: 155011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154325-155011:1:exon

TPCCA_RS05530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05530
old locus tag: TPCCA_0133b
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342713.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQLKQCAAHGIRFLQVCAYGVGVAAGAAYAQEVAPAASWDVTAAGRGIARVSFIGTVPLFQVNWCNTARGDLQGVAANGNKEVYPAFGVSFGYEYFVYRGLSLGIDASAQHYCSYPYNNVNQLCSYIAVPIALTAGYTLAFWRIRLPLTVGAGFNYQHYNTSTYCGLLLKAGAGCYVQLTERWSVGASAAYSGVPRACEKVFERNDKQTNTRTAQFVTAGVDIRYHL
SIO_010081: TPCCA_RS05530
subclass of: SO_0000673
so part of: TPCCA_RS05530
location: 154325..155011
location: region:154325-155011:1
so has part: feature:154325-155011:1:exon

WP_041609983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154325-155011:1:exon

TPCCA_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00685
old locus tag: TPCCA_t0009
so part of: sequence
location: 155160..155232
location: region:155160-155232:1
so has part: feature:155160-155232:1:exon
subclass of: SO_0000663

position:155160:1
position: 155160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155232:1
position: 155232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155160-155232:1:exon

TPCCA_RS00685
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS00685
old locus tag: TPCCA_t0009
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:155193..155195,aa:Val,seq:tac)
SIO_010081: TPCCA_RS00685
subclass of: SO_0000673
so part of: TPCCA_RS00685
location: 155160..155232
location: region:155160-155232:1
so has part: feature:155160-155232:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155160-155232:1:exon

TPCCA_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00690
old locus tag: TPCCA_0136
so part of: sequence
location: 155483..156682
location: region:155483-156682:1
so has part: feature:155483-156682:1:exon
subclass of: SO_0000010

position:155483:1
position: 155483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156682:1
position: 156682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155483-156682:1:exon

TPCCA_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00690
old locus tag: TPCCA_0136
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342715.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRRVCTVVRATVCLCGTSLLTTCDFSGIFATIQQEVAIKSPSIPGAIYGLVKAGGKLYATNGRLWEKDPSGTEWKPVSCFDSVIGGSRITSLAADNGGNGVLVACIPGKGAYKWQHKDCQTNGSLSALSGTEKALSVVGTGTSGVYLLNHTDDKVGETSTSNGTTALGEMNEFCLHAGNGFLVTTKKVCVGGDSTVAKSDGEEPVPPILAATDDGSGHVYILTKDKVYCKKVNQSEKKIQDCPQSAAAAAPAPAGAHSVAHKVADAHSIAFFKNGNDEFLLIGGRQGYGEIKLERSSGSSGNGAQCVHLKEQNVHDQTGWDEKSSTPKRSAEQYRSTIGRWAVSGIYVIEKKPGGGRKKRDTSANCERPDLYVAVGDTNDTYTGLWKFDTATNTWNRE
SIO_010081: TPCCA_RS00690
subclass of: SO_0000673
so part of: TPCCA_RS00690
location: 155483..156682
location: region:155483-156682:1
so has part: feature:155483-156682:1:exon

WP_049774992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155483-156682:1:exon

TPCCA_RS05205
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05205
so part of: sequence
location: 156959..157150
location: region:156959-157150:1
so has part: feature:156959-157150:1:exon
subclass of: SO_0000010

position:156959:1
position: 156959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157150:1
position: 157150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156959-157150:1:exon

TPCCA_RS05205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05205
inference: COORDINATES: protein motif:HMM:NF014743.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: major outer sheath C-terminal domain-containing protein
translation: MVSPLEKVEVRLSWEQGKLQENSNVVIEKNVTERWQFVGAVPRWVCSREGQGFVRSGLLRNIH
SIO_010081: TPCCA_RS05205
subclass of: SO_0000673
so part of: TPCCA_RS05205
location: 156959..157150
location: region:156959-157150:1
so has part: feature:156959-157150:1:exon

WP_083815490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156959-157150:1:exon

TPCCA_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00695
old locus tag: TPCCA_0138
so part of: sequence
location: complement(157097..157834)
location: region:157097-157834:-1
so has part: feature:157097-157834:-1:exon
subclass of: SO_0000010

position:157097:-1
position: 157097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157834:-1
position: 157834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157097-157834:-1:exon

TPCCA_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00695
old locus tag: TPCCA_0138
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881586.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQPPRPACQDEGTHGKEVCMLLIQKKRLLIVLIVSFLSILFSAGYAFRIGMLHAHKGSAETILFYGFVAAAFHFILSLYLMLHAHHKKKELLKLADMLRYGGSIGESHFKKFGVLGTQIQFLLKELLALSAQKSLKIAALSGLQRALTELVPTPVIIIDLNGTILDMTKGARKRVQRADKTLTIEHIFPATDSTRAVQEAEKTHTPVEQEGGIVFIPVFSAVGNISHFLVDISKQPASDEPLSLA
SIO_010081: TPCCA_RS00695
subclass of: SO_0000673
so part of: TPCCA_RS00695
location: complement(157097..157834)
location: region:157097-157834:-1
so has part: feature:157097-157834:-1:exon

WP_013944839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157097-157834:-1:exon

TPCCA_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00700
old locus tag: TPCCA_0139
so part of: sequence
location: complement(157842..158534)
location: region:157842-158534:-1
so has part: feature:157842-158534:-1:exon
subclass of: SO_0000010

position:157842:-1
position: 157842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158534:-1
position: 158534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157842-158534:-1:exon

TPCCA_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00700
old locus tag: TPCCA_0139
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881587.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrkA family potassium uptake protein
translation: MAVKRNFAVVGLGAFGYRVCEVLVQGGGSVVAIDNNAQTVEKVKKVVSVAILIDTTSETELMKAPLDDVDVAIVAIGTNLQASILTTALLKQRDIPYILARATSPIHETILRKIGANEILNIEVASATTIAKRLVAPDVTDAIAMTDDISLREIVAPRFFTDKTLEELELREKFNVKIVAVVRTDMDIDPTGNSLPKKNIYYPDNAFTFKRADRMFVLGHNRDLRELTQI
SIO_010081: TPCCA_RS00700
subclass of: SO_0000673
so part of: TPCCA_RS00700
location: complement(157842..158534)
location: region:157842-158534:-1
so has part: feature:157842-158534:-1:exon

WP_013944840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157842-158534:-1:exon

TPCCA_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00705
old locus tag: TPCCA_0140
so part of: sequence
location: complement(158574..160292)
location: region:158574-160292:-1
so has part: feature:158574-160292:-1:exon
subclass of: SO_0000010

position:158574:-1
position: 158574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160292:-1
position: 160292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158574-160292:-1:exon

TPCCA_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00705
old locus tag: TPCCA_0140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342294.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015379 - potassium:chloride symporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrkH family potassium uptake protein
translation: MHIGNFTHLTMLVLCLAIRLCDQFLPFSVQFFTIVGDVGILVLVWSSLASSLNKEKYVRTFLRQYTVPVFLGLLITLLTFVRASVTLTTASGDLYTTLTHIQNITLGVFALIAFKAQKKFAERAVSNPSQTLIVSFLVVIFIGTHLLMFPGATPHSQPLPMLTALFTATSAVCVTGLSVIDVATQLSTWGKAILAALIQIGGLGFMVFSFFGMITIKKKMSLESRLVASHLVSDSDMGSLSHNLKLIIFSTFFIEALSALFLFIGFSQTEGYTIQSLGNAYFHAISAFCNAGFSLYPNSLESFVSNPWITFPIAFTIILGGISFVVIDEVLCRVHGSIKNIFFKGKNILGSLSLNTFVVLKATVLLLAVSFVGIYLLEHTHSMKVYQVGTQYLAAFFQAVTLRTAGFSTIPFSNLRTATLFFMTFIMFVGGASGSTAGGIKLNTAAAIIASFRSFIHHDPKPRIRNLVIQGKQVERSFLILGFGICTVCLAGFCLSLTDNIPFIYLLFESVSAFATVGLSVGITANLSTAGLMILLILMFTGRVGTLTILTAASKEEQDMSVEYACGDLAIG
SIO_010081: TPCCA_RS00705
subclass of: SO_0000673
so part of: TPCCA_RS00705
location: complement(158574..160292)
location: region:158574-160292:-1
so has part: feature:158574-160292:-1:exon

WP_245522151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158574-160292:-1:exon

TPCCA_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00710
old locus tag: TPCCA_0141
so part of: sequence
location: 160472..161005
location: region:160472-161005:1
so has part: feature:160472-161005:1:exon
subclass of: SO_0000010

position:160472:1
position: 160472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161005:1
position: 161005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160472-161005:1:exon

TPCCA_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00710
old locus tag: TPCCA_0141
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881589.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methylated-DNA--[protein]-cysteine S-methyltransferase
translation: MSVHQGGIRFPLLYLEMETPLGRMCIAERAHTIVYVWLHRVGPRGSPVSGVCAQHVCPGKTALLRETQSQIHAYFCGALREFSVPVTAEGTPFMQRVWGATRNIAYGTTKSYAQLSQDIGCPRAARAVGQALHRNPLLLLIPCHRVISARASIGDFAYGSALKHFLLQQEAAVCACE
SIO_010081: TPCCA_RS00710
subclass of: SO_0000673
so part of: TPCCA_RS00710
location: 160472..161005
location: region:160472-161005:1
so has part: feature:160472-161005:1:exon

WP_013944843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160472-161005:1:exon

TPCCA_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00715
old locus tag: TPCCA_0142
so part of: sequence
location: complement(160956..161618)
location: region:160956-161618:-1
so has part: feature:160956-161618:-1:exon
subclass of: SO_0000010

position:160956:-1
position: 160956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161618:-1
position: 161618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160956-161618:-1:exon

TPCCA_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00715
old locus tag: TPCCA_0142
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944844.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MDNRPYVVVQELTKVWEEKRISLSFSLRQGTSLALLGASGCGKSTILKMIAGLITPDHGSVFIAGTNVTHWAPARRRIGMICQDFALFPHLSLEDNIGYGLVSQGLTKKTARVHAREWMARFGLQNMEKRSVTTLSHGEKQRVALARSLAVRPALILFDEALSAIDADLRTTLQGELRALQRSLGYTAVYVTHDSTEAAVLADTVIHMRTQPPLAAAKNA
SIO_010081: TPCCA_RS00715
subclass of: SO_0000673
so part of: TPCCA_RS00715
location: complement(160956..161618)
location: region:160956-161618:-1
so has part: feature:160956-161618:-1:exon

WP_013944844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160956-161618:-1:exon

TPCCA_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00720
old locus tag: TPCCA_0143
so part of: sequence
location: complement(161611..163353)
location: region:161611-163353:-1
so has part: feature:161611-163353:-1:exon
subclass of: SO_0000010

position:161611:-1
position: 161611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163353:-1
position: 163353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161611-163353:-1:exon

TPCCA_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00720
old locus tag: TPCCA_0143
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342716.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron ABC transporter permease
translation: MTTLLHPCRRSCASGALYLTRGRDARNYCVALICALCFSLSMGTFLIPVFTAGSAFFSKPRLENTAAHPSPGALQTGSPITPFFFPPGTPGAARFGTLFAQSVFQALCSAVLACAVGFGAAFFFVKRSLRARAFFPALCAIPLAVPPLTMALAFLLSFGKNGLCTRTLGTLWGVSTPRTFLYSASGVVIAHAWYNFPLALAIIARAWNTISTDAEDAARLLGARAYRVFYTITLPALAGALRSSFLVIFLYCFFNLMMVLLLGGTTFTTLEVELYRSIRTQAAHPYASTLALSQTFYALLMIWGVSTEESQQAQSCVARTRPLPTQSIQGNIERIGFFALLCGILFFLILPLFSLILHSITRHRTGRTVSFTLTAWHTLFSAPSFWHALRSTIWIGFWSFCVTVGSVLCYGYMVLMRHVSRWKTRLPFLPLAVSPMVLAFGWSLMPRCASRILLVCAQSALAFPFAWLSLYSTLMRIPTPVIFTGQMLSRNRLDFFLRTICPLCKKGIVSAGVYAFALSAADAAFPLVLEIPDFQSVALLLYRLSSTYRFAESSALALVLSLASSVLLIGVHQCKEYSYG
SIO_010081: TPCCA_RS00720
subclass of: SO_0000673
so part of: TPCCA_RS00720
location: complement(161611..163353)
location: region:161611-163353:-1
so has part: feature:161611-163353:-1:exon

WP_245522152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161611-163353:-1:exon

TPCCA_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00725
old locus tag: TPCCA_0144
so part of: sequence
location: complement(163350..164357)
location: region:163350-164357:-1
so has part: feature:163350-164357:-1:exon
subclass of: SO_0000010

position:163350:-1
position: 163350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164357:-1
position: 164357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163350-164357:-1:exon

TPCCA_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00725
old locus tag: TPCCA_0144
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944846.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine ABC transporter substrate binding subunit
translation: MAHRMRVVFCCAAALSLCCCSRSRTDAPSLVIYVYDSFASEWGPGPELARRFYAKTGYSVQYVVFEDVTRAIHRAIRDQHTPSSRGADLIIGVDQYTLPLAREADLFSPYQPALPLPHALRIDPHNLAVPYDWGYVAFMFNTDAELPEPQRLSDLANPVYAKSIALADPHTNVLGTIFIGWAHTSLGAAWPAFWNTLYRANLLALAPSWSAAYGLFTAGEAALVLSYTTSAAYHLHHDNHTRFKPLLFPEGHPMHIEGISLVKRTKHARVATQFIDFLLSTEAQELLPLTQWMYPANPDVPLPAAFSAVPQPAACVSLSPQMCRAAAAALHASTP
SIO_010081: TPCCA_RS00725
subclass of: SO_0000673
so part of: TPCCA_RS00725
location: complement(163350..164357)
location: region:163350-164357:-1
so has part: feature:163350-164357:-1:exon

WP_013944846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163350-164357:-1:exon

TPCCA_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00730
old locus tag: TPCCA_0145
so part of: sequence
location: 164467..166437
location: region:164467-166437:1
so has part: feature:164467-166437:1:exon
subclass of: SO_0000010

position:164467:1
position: 164467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166437:1
position: 166437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164467-166437:1:exon

TPCCA_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00730
old locus tag: TPCCA_0145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881593.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: long-chain fatty acid--CoA ligase
translation: MSVCCTSSEERIERSKNLVHLVAQVAGAYAQLPAQYAKSSSGVFETTSFASFYEHVCLFAAGLASIGCGRGDCIGLISDNRVEWLHASFGIQALGAADVPRGSDATERDLVQILGAVEARTVIVENDAQLKKLARCFDALPSVSQIVLLDAGGAYQAMKDEFVQNEDGSARKCSFFTYQDILAHGTQFRVHHPGRIEDEIGRTTRADVATIIFTSGTTGTPKGVVLSHENFLCQLIDISHRLTVCPGDIALSVLPVWHVFERISEYVVLSHAGGVAYSKPVGSVMLADLAKLNPHFLPSVPRIWEAIHDGIFKNVRKKGGVAAALFHFFLAAGKAYAYFYRSVFGLRTHTTRRAQFCAPLFACVPWLLLVPLHFLGNVLVFRKVRKEFGTSFKTAISGGGALPPNVDEFLYAIGVRVLEGYGLTETAPVIAMRSERRPVFGSVGTPCAYNEVKIVDDTGAQLPVGYKGIVLVRGKNIMQGYYKNPELTAQVLDADGWFNTGDIGYRCVGGQIVLRGRKKDTVVLRGGENVEPVPLEMSMQESRFIARAVVVGQDERYLAALIVPDEAELRLWAEAQELRTECMEELLVNPAVVKFFEQEIAKRISPENGFKIFERINRFVLLPKVFEVGVELSAKQEVMRHRVADLYAKEIAQLFS
SIO_010081: TPCCA_RS00730
subclass of: SO_0000673
so part of: TPCCA_RS00730
location: 164467..166437
location: region:164467-166437:1
so has part: feature:164467-166437:1:exon

WP_049774978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164467-166437:1:exon

TPCCA_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00735
old locus tag: TPCCA_t0010
so part of: sequence
location: complement(166511..166592)
location: region:166511-166592:-1
so has part: feature:166511-166592:-1:exon
subclass of: SO_0000663

position:166511:-1
position: 166511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166592:-1
position: 166592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166511-166592:-1:exon

TPCCA_RS00735
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS00735
old locus tag: TPCCA_t0010
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(166556..166558),aa:Leu,seq:gag)
SIO_010081: TPCCA_RS00735
subclass of: SO_0000673
so part of: TPCCA_RS00735
location: complement(166511..166592)
location: region:166511-166592:-1
so has part: feature:166511-166592:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:166511-166592:-1:exon

TPCCA_RS05210
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05210
so part of: sequence
location: 166567..167256
location: region:166567-167256:1
so has part: feature:166567-167256:1:exon
subclass of: SO_0000010

position:166567:1
position: 166567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167256:1
position: 167256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166567-167256:1:exon

TPCCA_RS05210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05210
inference: COORDINATES: protein motif:HMM:NF014471.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromate transporter
translation: MYTTSTTAAQRAQACHIWLQEINGFLCILSFFLSKRRHALSSRRPSCSELAQLFWVFFKIGLSTFGGGVAMLPLLKRLLCEHKKWVDEEELVNCFAIGQCTPVIIAVNVATFCGAKRARFWGALCTTLGVVTPSFLIIVFLAVGIRSLHTYAWTTRVLKGMNVAVSVLLMRTLFALRKKSLPDAGAWVTAMGTYGMMHVFHFPSLLAMLSAALAGLAIKTVRMWCASRV
SIO_010081: TPCCA_RS05210
subclass of: SO_0000673
so part of: TPCCA_RS05210
location: 166567..167256
location: region:166567-167256:1
so has part: feature:166567-167256:1:exon

WP_083815491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166567-167256:1:exon

TPCCA_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00745
so part of: sequence
location: 167253..167564
location: region:167253-167564:1
so has part: feature:167253-167564:1:exon
subclass of: SO_0000010

position:167253:1
position: 167253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167564:1
position: 167564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167253-167564:1:exon

TPCCA_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00745
inference: COORDINATES: protein motif:HMM:NF014471.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromate transporter
translation: MNLWSLCFLFMYVGLCSIGGGLVSLSVMQRELLIRGMVSAEHFYSMVAISESTPGPIGINLATYVGYEYAGIAGALVCTSALVFPSFIIIFLWSVFCAPFNTA
SIO_010081: TPCCA_RS00745
subclass of: SO_0000673
so part of: TPCCA_RS00745
location: 167253..167564
location: region:167253-167564:1
so has part: feature:167253-167564:1:exon

WP_041610023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167253-167564:1:exon

TPCCA_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00750
so part of: sequence
location: 167540..167830
location: region:167540-167830:1
so has part: feature:167540-167830:1:exon
subclass of: SO_0000010

position:167540:1
position: 167540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167830:1
position: 167830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167540-167830:1:exon

TPCCA_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00750
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRAFQHSVILTRMLYGLRAGALGMIAGAVGTVFSIAVFPYAQFFQFVIGKRNTPPSLGVHTLTLFLVLCALSFFFKRIHPVFLIFLGALGALCFGN
SIO_010081: TPCCA_RS00750
subclass of: SO_0000673
so part of: TPCCA_RS00750
location: 167540..167830
location: region:167540-167830:1
so has part: feature:167540-167830:1:exon

WP_144011657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167540-167830:1:exon

TPCCA_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00755
old locus tag: TPCCA_0147
so part of: sequence
location: complement(167840..169741)
location: region:167840-169741:-1
so has part: feature:167840-169741:-1:exon
subclass of: SO_0000010

position:167840:-1
position: 167840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169741:-1
position: 169741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167840-169741:-1:exon

TPCCA_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00755
old locus tag: TPCCA_0147
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002697112.1
GO function: GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1926 domain-containing protein
translation: MAFSDTRGGDENPIMKKGDNSKIRIAFAAKLTGACVQSLHAEHDPSQYQAFFSGLCRHEQLPLTVHMTGSFFQFIQKKNSPYPYLINNLLGSKRLELLSGGFYQPYLPLLPQADVISQIELLTSTLREHVIKRPRGCFLEASAWSAALIPSLVKAGMEYCLLDYRLFEASDMPATKPAVLEDSSKCLVALPYRELTIDTPAETFYAQLVARYGDTPGTVLIFMLPLDCYQKLFFTHDNASTWFKTFIQYVQKPNSPFRLTHTGEIYKEPPVCLGYIASNMVRNDVLLHKTAKQLIICSTHARLLYAKMMYVHNIAMQIKGDKQRKHHALSELWKAEQGVFFISSDRGYASAGSAQRTAYKYLLTAEKVARTPGVFNNSLITFDFNFDGVREFLSQRELMNMYVQLPGGLIFEFDIFSSYKNYAAVPRQPGGIFIDYVLSEQDVVHLRETPGHAVPTVFSHTPYQEIGFDPIKHELTLRAEGIFEEFNQPVSLKKQYFFKSEGVQVQYILKNESPLNLSAFFAVEMNLAVHGTGDAAPELVVFSENEKYTAAITRDHFPCISWMRLTDPEGKTVFTIEGNENPDVAITPLCESTSNQYANTEGIKCLFYWKVDLNAGYETEKMLFLKAFSTKKR
SIO_010081: TPCCA_RS00755
subclass of: SO_0000673
so part of: TPCCA_RS00755
location: complement(167840..169741)
location: region:167840-169741:-1
so has part: feature:167840-169741:-1:exon

WP_245522154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167840-169741:-1:exon

TPCCA_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00760
old locus tag: TPCCA_0148
so part of: sequence
location: complement(169696..170274)
location: region:169696-170274:-1
so has part: feature:169696-170274:-1:exon
subclass of: SO_0000010

position:169696:-1
position: 169696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170274:-1
position: 170274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169696-170274:-1:exon

TPCCA_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00760
old locus tag: TPCCA_0148
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342299.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVTMVPPLFFVCALFFAEGIGLDRLCIAALSPRCTLFHTCRFLFLGGILITGNWVCIHYVYDPLALRFLTPLGVGASAFCLSTCSGKLSRTCTSHRAQSEWGLLYALVFYITYTALNLFEALVMWGVSCVGFLCFSTILRAIHQRITQGNGTAVEKTAALLLASMGFIALSLYGTDELWLFPIPAAGMRTRL
SIO_010081: TPCCA_RS00760
subclass of: SO_0000673
so part of: TPCCA_RS00760
location: complement(169696..170274)
location: region:169696-170274:-1
so has part: feature:169696-170274:-1:exon

WP_010881595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169696-170274:-1:exon

TPCCA_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00765
old locus tag: TPCCA_0149
so part of: sequence
location: complement(170268..170861)
location: region:170268-170861:-1
so has part: feature:170268-170861:-1:exon
subclass of: SO_0000010

position:170268:-1
position: 170268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170861:-1
position: 170861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170268-170861:-1:exon

TPCCA_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00765
old locus tag: TPCCA_0149
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342300.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKYTVKRASVLCIFGIGLFVPATGTFACGLLLVLGFWVLFFSSLLARFLSQFFMRTRSAPLFEVCLTLSAAIMYDNLIQGFFPLVRMMLCPYLFITALSRTLDLCLTAYDADAESLECAGVFGIMIAGISLVRELVAFGCVSLPAPSGFLRIISFPPSNVIRFAATGAGTLISCGIVLWIFRSAGNDHTPSLRSEW
SIO_010081: TPCCA_RS00765
subclass of: SO_0000673
so part of: TPCCA_RS00765
location: complement(170268..170861)
location: region:170268-170861:-1
so has part: feature:170268-170861:-1:exon

WP_013944849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170268-170861:-1:exon

TPCCA_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00770
old locus tag: TPCCA_0150
so part of: sequence
location: complement(170854..171321)
location: region:170854-171321:-1
so has part: feature:170854-171321:-1:exon
subclass of: SO_0000010

position:170854:-1
position: 170854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171321:-1
position: 171321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170854-171321:-1:exon

TPCCA_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00770
old locus tag: TPCCA_0150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881597.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTYNTNTRLSSYAGLSAFALSVFCILWGTARTGSFLKEKALITCAVDILARQAPELGVTSRTLRMVPSSPIPQAEVLRGKKNTGEEIFLYFFPLRGMYGSFPTLFLYDKKDGARFCHLIGNHPTPRDARFYGISSARIALQCRKIEHLHQTVAYE
SIO_010081: TPCCA_RS00770
subclass of: SO_0000673
so part of: TPCCA_RS00770
location: complement(170854..171321)
location: region:170854-171321:-1
so has part: feature:170854-171321:-1:exon

WP_193386053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170854-171321:-1:exon

TPCCA_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00775
old locus tag: TPCCA_0151
so part of: sequence
location: complement(171305..172324)
location: region:171305-172324:-1
so has part: feature:171305-172324:-1:exon
subclass of: SO_0000010

position:171305:-1
position: 171305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172324:-1
position: 172324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171305-172324:-1:exon

TPCCA_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00775
old locus tag: TPCCA_0151
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342302.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RnfABCDGE type electron transport complex subunit D
translation: MHTAEYKHAPFLYTGLSAGQNDSVLLALLVAHVFVVAAMRDTVALFSIVSTELGALSAALVQTLRTPHAPLSDSLVLGLLIGAVLPAHNSFLNTFCVAFCAVFFTRVLFGGKTGNWLNPIALAPVLLRLCTEGTSLPTSGRVSVVQGAMSYPLFYSALVEWDAAVRTWCNTQVFQPLGLTLPEGALSACVFTQAAAPGFRYPVLTLLAALCVYAVRARRYICSCAFLMVYSTLFFLPAHAHPATLVSLIKSGALFTAFFVLPEPDTSMRTNGGAWISGGLCAMCAFFLAKKNSSAPDMWGAHDMHLWSAILLTNIVQPLILRAESWYYYVRRRRYDVQH
SIO_010081: TPCCA_RS00775
subclass of: SO_0000673
so part of: TPCCA_RS00775
location: complement(171305..172324)
location: region:171305-172324:-1
so has part: feature:171305-172324:-1:exon

WP_013944851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171305-172324:-1:exon

TPCCA_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00780
old locus tag: TPCCA_0152
so part of: sequence
location: complement(172311..173795)
location: region:172311-173795:-1
so has part: feature:172311-173795:-1:exon
subclass of: SO_0000010

position:172311:-1
position: 172311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173795:-1
position: 173795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172311-173795:-1:exon

TPCCA_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00780
old locus tag: TPCCA_0152
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342780.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SLBB domain-containing protein
translation: MIERLRSSRGKLTLTHQIFPLSFGGNAFLPARALVPFSVDAGEPAAVAVVKVGDTVREGQLIARAAHAGAAHAHASVPGVVTRLVSANFLAGSALRAVEIRTRGSFEHLGKVQPNRPWQHSTASELLRLVTDAGVVATRLHPHAQITSTATGTHAGAQHTYAKDYGQKGRTEAHTLRLMRAAWESGNALATHLHLHVRKGVRKLTLYLCDDDATCPLSSFLAQEFPEPVATGTAIIARILDATYTACLHTLPKRSPGLARMRAVFPFNEMHDAYRRHYPFSNLCAPRYRAGCTIDALTAVHVYEAVVLSQPQISSYIALTGAGLKSPQVLRARIGTPLGALIEECGGFRTRPGHLIINGLLKGSVLESLDLPFSKGIKSLHVTGKALSSSASCTSCQNCGDCARICPVYLDPIKIARAAHRNQFTEEVLQSLRICHQCGLCSAACTARIPLAKLLHDAQERALHLSRAPVTKIEPHSTQSVGKTIREAPANAHR
SIO_010081: TPCCA_RS00780
subclass of: SO_0000673
so part of: TPCCA_RS00780
location: complement(172311..173795)
location: region:172311-173795:-1
so has part: feature:172311-173795:-1:exon

WP_013944852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172311-173795:-1:exon

TPCCA_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00785
old locus tag: TPCCA_0153
so part of: sequence
location: complement(173931..174422)
location: region:173931-174422:-1
so has part: feature:173931-174422:-1:exon
subclass of: SO_0000010

position:173931:-1
position: 173931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174422:-1
position: 174422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173931-174422:-1:exon

TPCCA_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00785
old locus tag: TPCCA_0153
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944853.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: divergent PAP2 family protein
translation: MDGGYFLGQLHAVFSGEVFLSATCSWLASQVIKTAIACRRSAIRSVHGFFDFAVWRTGGMPSSHSALVSALTLSFALKCGLHSDLFIFSFFSAIIVVRDALGVRRSSGLQAEALNSLGARVSEKLDFSFRPVREIHGHKPLEVVVGVAVGIVTSALFYSSMSP
SIO_010081: TPCCA_RS00785
subclass of: SO_0000673
so part of: TPCCA_RS00785
location: complement(173931..174422)
location: region:173931-174422:-1
so has part: feature:173931-174422:-1:exon

WP_013944853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173931-174422:-1:exon

TPCCA_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00790
old locus tag: TPCCA_0154
so part of: sequence
location: 174647..175684
location: region:174647-175684:1
so has part: feature:174647-175684:1:exon
subclass of: SO_0000010

position:174647:1
position: 174647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175684:1
position: 175684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174647-175684:1:exon

TPCCA_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00790
old locus tag: TPCCA_0154
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015026147.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RluA family pseudouridine synthase
translation: MDVVPPVSTVRPHGGAAVECFRCTQNDAGRRVDRVLRILLPACPRVGVYAALRRTAIRLNGRPVQPAKRVQVGDVLSLPESLCRARAASSRLSKMPGTPKLRVLPSVVFKTQDLLFFHKPAGLCVHGPRSLDAWVRGQGRAHVPPALSFRPGPLHRLDRGTEGLIAFSRSLRGAQWFSAALQQHTLRKFYLAITAAPARTAAAARTLVRSGEVTHVQTVLYSCDSALVLRVIVPVTGKKHQIRRYCAAQGFPLVGDRTYGGVSQHGNARYTRFFLLAWCVRFPSSRLQALPAQVWTTPSPAFMRVLTSFPPDSLARARACVDALDGALGTDATCPQDTAVCTPEG
SIO_010081: TPCCA_RS00790
subclass of: SO_0000673
so part of: TPCCA_RS00790
location: 174647..175684
location: region:174647-175684:1
so has part: feature:174647-175684:1:exon

WP_245522155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174647-175684:1:exon

TPCCA_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00795
old locus tag: TPCCA_0155
so part of: sequence
location: 175690..176805
location: region:175690-176805:1
so has part: feature:175690-176805:1:exon
subclass of: SO_0000010

position:175690:1
position: 175690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176805:1
position: 176805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175690-176805:1:exon

TPCCA_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00795
old locus tag: TPCCA_0155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881602.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MSVYCRSSKQTVREPCRPVPVGALLLFVTLLLLALALAYFGAQVEPLTPALTLTEQEPRQASGYVSSLLRARIVQEDAEPALYYTVYEVREGDVVGRIAQRYDISQDAIISLNKLRSTRALQVGQLLKIPSVDGILYTVKNGDTFSSIAAAHQISLERLVLLNTPSSSKESPPSVRTLVSPFYNSAARESCVPFPFSSAKQWRENTSFDVVQPLQPARVLFLPGAHLSARALQEINGDLFRAPLRSRYYVSSRYGWRSDPFTGARSFHNGLDMVSRRGTPVYSALGGIVRTVGYSAVYGNYLIVGHHAGYQTLYGHLQTVLVSAGTRVTSATKIGLLGKTGRSTGPHLHFTIYKNGSAINPTSLLRMRTRP
SIO_010081: TPCCA_RS00795
subclass of: SO_0000673
so part of: TPCCA_RS00795
location: 175690..176805
location: region:175690-176805:1
so has part: feature:175690-176805:1:exon

WP_013944855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175690-176805:1:exon

TPCCA_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00800
old locus tag: TPCCA_0156
so part of: sequence
location: complement(176847..177251)
location: region:176847-177251:-1
so has part: feature:176847-177251:-1:exon
subclass of: SO_0000010

position:176847:-1
position: 176847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177251:-1
position: 177251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176847-177251:-1:exon

TPCCA_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00800
old locus tag: TPCCA_0156
EC number: 3.1.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881603.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioesterase family protein
translation: MNFSLEFPVRSYELDGYGHVNNAVYLQYFEYARAAFLLHIGFDLKQLHEAGYAFYVTQAHIHYRTAVHLFDTLRARVKPLKLGKASGVFSQTLENQHHVLCADAEITWVCVSRTSGKPTKIPPEYLVPALYPDY
SIO_010081: TPCCA_RS00800
subclass of: SO_0000673
so part of: TPCCA_RS00800
location: complement(176847..177251)
location: region:176847-177251:-1
so has part: feature:176847-177251:-1:exon

WP_013944856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176847-177251:-1:exon

TPCCA_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00805
old locus tag: TPCCA_0157
so part of: sequence
location: complement(177248..178150)
location: region:177248-178150:-1
so has part: feature:177248-178150:-1:exon
subclass of: SO_0000010

position:177248:-1
position: 177248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178150:-1
position: 178150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177248-178150:-1:exon

TPCCA_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00805
old locus tag: TPCCA_0157
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881604.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase
translation: MSIHSLQQTFSDIVPLLEQYTRADRFMREDNLLHERNEPIRRIVESLVARILLPGSTMRGNEQIASFLHKTNEGKRGLILAEHYSNFDLPCLLYLMEQGSSAGRMLSEKIVSITGIKLREENRILAMLTEGYDHLVIYPSRSLATITDAHCLARETKRSRALNRAAMKYLEELRNAGKVILVFPAGTRYRPGRPETKRGVREVYSYIKHADVLLLISINGNCLRVAERSTDMTEDAVHPDVVLLEARTVDDCALFREKALDWHRTHNVAAPSEDKKQIVVDYVMHLLEEMHEHNERERLS
SIO_010081: TPCCA_RS00805
subclass of: SO_0000673
so part of: TPCCA_RS00805
location: complement(177248..178150)
location: region:177248-178150:-1
so has part: feature:177248-178150:-1:exon

WP_013944857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177248-178150:-1:exon

TPCCA_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00810
old locus tag: TPCCA_0158
so part of: sequence
location: complement(178147..178812)
location: region:178147-178812:-1
so has part: feature:178147-178812:-1:exon
subclass of: SO_0000010

position:178147:-1
position: 178147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178812:-1
position: 178812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178147-178812:-1:exon

TPCCA_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00810
old locus tag: TPCCA_0158
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505423.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyrimidine 5'-nucleotidase
translation: MIRHILFDIDNTLYSCTNPIEMAITQRIHTFVAHFLHVSCEEARALRQRTKHLYATTFEWLKAEHNLIHDEHYFRAVYPPTEIQELQYDPLLRPFLQSLHMPLTALTNAPRVHAQRVLDFFHLSDLFLDVFDITYHAGKGKPHHSCFVRTLEAVHKTVQETLFVDDCLMHVRAFIALGGHAVLVDERDCHAELPPSARMTRVKTIYELPAHLARLAQGDNQ
SIO_010081: TPCCA_RS00810
subclass of: SO_0000673
so part of: TPCCA_RS00810
location: complement(178147..178812)
location: region:178147-178812:-1
so has part: feature:178147-178812:-1:exon

WP_245522156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178147-178812:-1:exon

TPCCA_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00815
old locus tag: TPCCA_0159
so part of: sequence
location: complement(178837..179865)
location: region:178837-179865:-1
so has part: feature:178837-179865:-1:exon
subclass of: SO_0000010

position:178837:-1
position: 178837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179865:-1
position: 179865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178837-179865:-1:exon

TPCCA_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00815
old locus tag: TPCCA_0159
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881606.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYIKVALVCLFSMGARCLLATEPAPVSGDYVLYRDYSWKSPTWVGFLCYDAHTYGALLCTPAESRRITILFTGTEKHGRFELTGQRITSPVRTEDLTGINYLMDLFPQLQRWKHFPRDTHTLVARHTDRSKKSTQFSGAVELQFASFVPLFHLEILRDKQQRVMLQLSEIGKIDHTSDAAFFQFTPMPPSTPTDAPPATLNQTLTRTEYVIDDVCIALDPQWKRIAENSFLSDFAFLTVHQVPAPRAHDYSALRALLQLFLYSGPQGKNILEQLHINDTHARLTLSYAVFDLPSKTVKKTWKIFIRHSDTHYSILSLTADQRTAQRYARYFDTLIETIRTKN
SIO_010081: TPCCA_RS00815
subclass of: SO_0000673
so part of: TPCCA_RS00815
location: complement(178837..179865)
location: region:178837-179865:-1
so has part: feature:178837-179865:-1:exon

WP_010881606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178837-179865:-1:exon

TPCCA_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00820
old locus tag: TPCCA_0160
so part of: sequence
location: complement(179981..181834)
location: region:179981-181834:-1
so has part: feature:179981-181834:-1:exon
subclass of: SO_0000010

position:179981:-1
position: 179981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181834:-1
position: 181834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179981-181834:-1:exon

TPCCA_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00820
old locus tag: TPCCA_0160
EC number: 6.1.1.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881607.1
GO function: GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO process: GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: proline--tRNA ligase
translation: MSAFFAPTLRSAPADATIASHQLLMRAGYVRKIANGLFAYLPLGLRVRHKIEAIIREELEAIGCLECTAPVVTPAELWKESGRWYRMGAELLRAKNRLDHELLFSPTAEESFTALVRGDCTSYKHFPLSLYQINAKYRDEIRPRYGLMRAREFTMVDAYSFHTDCACLARTYEKFAHAYRAIFRRIGLSVIAVHAHLGAMGGQESEEFMVESAVGDNTLLLCPHCTYAANCEKAVGQRPLPDTHDTHLKDEHAGSDLKTPAAMREVHTPHVKTIEELEHFLHVPAHRCIKTLIYRIDTVPQAAGHFVAVCIRGDLELNESKLEALLRVPSVVLATEQEVYALSGTPVGFIGPVGLAQRAAAAYAARTPAFFPSAAEPASVTSDIPFFSLVADQSVMAMHDAITGALKVDTHLVQVEPGRDFVPDAVADLMLVRAGDRCIHCGAPLYEKKGNELGHLFKLGDKYTRSMHLTFTDEQGVRQFPLMGCYGIGLDRTLASVVENHHDTRGISWPLAISPYAVVLIPIPHTQAPYAAAEALYVQLRTRGVEVLFDDRAERPGVKFADADLIGIPLRVVLSAKTLPRVECTTRCGAHTYFFTQEEASEHIARLLEQLASPESS
SIO_010081: TPCCA_RS00820
subclass of: SO_0000673
so part of: TPCCA_RS00820
location: complement(179981..181834)
location: region:179981-181834:-1
so has part: feature:179981-181834:-1:exon

WP_083815492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179981-181834:-1:exon

TPCCA_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: ruvB
locus tag: TPCCA_RS00825
old locus tag: TPCCA_0162
so part of: sequence
location: complement(181946..182998)
location: region:181946-182998:-1
so has part: feature:181946-182998:-1:exon
subclass of: SO_0000010

position:181946:-1
position: 181946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182998:-1
position: 182998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181946-182998:-1:exon

TPCCA_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: ruvB
locus tag: TPCCA_RS00825
old locus tag: TPCCA_0162
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881609.1
GO component: GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO function: GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Holliday junction branch migration DNA helicase RuvB
translation: MDHTASLSPVRPEAQPTDDRERALRPRLLKDFLGQEKTKRNLRLFIQAARDRNESLDHLFLIGPPGLGKTTLAHITACELGVECKVTGAPALDKPKDLAGILTALSERSVFFVDEIHRLKPAIEEMLYIAMEDYELDWVIGQGPSARTVRIPLPPFTLIGATTRAGMVSSPLISRFGIVERFEFYTPEELAAIVQRSARLLDITLDARAALALARCSRGTPRVANRLLRRIRDFAQVAGSAHISETIVRAGLAHLKIDELGLELHDIQLLRVMIEHFGGGPVGAETLAISLGESPETLEDYYEPYLIQIGLMQRTPRGRMATARAYAHLGLPVPEARTLTPHSPEQGTLL
SIO_010081: TPCCA_RS00825
subclass of: SO_0000673
so part of: TPCCA_RS00825
location: complement(181946..182998)
location: region:181946-182998:-1
so has part: feature:181946-182998:-1:exon

WP_010881609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181946-182998:-1:exon

TPCCA_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: troA
locus tag: TPCCA_RS00830
old locus tag: TPCCA_0163
so part of: sequence
location: 183174..184100
location: region:183174-184100:1
so has part: feature:183174-184100:1:exon
subclass of: SO_0000010

position:183174:1
position: 183174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184100:1
position: 184100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183174-184100:1:exon

TPCCA_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: troA
locus tag: TPCCA_RS00830
old locus tag: TPCCA_0163
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881610.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transition metal ABC transporter substrate-binding protein TroA
translation: MIRERICACVLALGMLTGFTHAFGSKDAAADGKPLVVTTIGMVADAVKNIAQGDVHLKGLMGPGVDPHLYTATAGDVEWLGNADLILYNGLHLETKMGEVFSKLRGSRLVVAVSETIPVSQRLSLEEAEFDPHVWFDVKLWSYSVKAVYESLCKLLPGKTREFTQRYQAYQQQLDKLDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDMQELAAFIAQRKLPAIFIESSIPHKNVEALRDAVQARGHVVQIGGELFSDAMGDAGTSEGTYVGMVTHNIDTIVAALAR
SIO_010081: TPCCA_RS00830
subclass of: SO_0000673
so part of: TPCCA_RS00830
location: 183174..184100
location: region:183174-184100:1
so has part: feature:183174-184100:1:exon

WP_013944861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183174-184100:1:exon

TPCCA_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: troB
locus tag: TPCCA_RS00835
old locus tag: TPCCA_0164
so part of: sequence
location: 184248..185048
location: region:184248-185048:1
so has part: feature:184248-185048:1:exon
subclass of: SO_0000010

position:184248:1
position: 184248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185048:1
position: 185048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184248-185048:1:exon

TPCCA_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: troB
locus tag: TPCCA_RS00835
old locus tag: TPCCA_0164
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881611.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transition metal ABC transporter ATP-binding protein TroB
translation: MAEISATAYAVQVDDLTLAYRQKPVLWDVDVRIPEGVIEAIIGPNGAGKSTLLKAIMGLLPLASGEVRVFGRPFSKERRRVAYVPQRSAVDWDFPTTVFDVVLMGSYGSLGWIRRPGKREKARAREAIEEVGMGAFLDRQISELSGGQQQRVFLARALVQDADLYFMDEPFQGVDAATEQAIVTLLKTLKGRGKTLLVVHHDLQTVAEYFDRVLLLNVRVIAEGAVVSAFTEEYVQRAYGGRISSTLFPRGNKEDVHDARAHASVL
SIO_010081: TPCCA_RS00835
subclass of: SO_0000673
so part of: TPCCA_RS00835
location: 184248..185048
location: region:184248-185048:1
so has part: feature:184248-185048:1:exon

WP_013944862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184248-185048:1:exon

TPCCA_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: troC
locus tag: TPCCA_RS00840
old locus tag: TPCCA_0165
so part of: sequence
location: 185020..185916
location: region:185020-185916:1
so has part: feature:185020-185916:1:exon
subclass of: SO_0000010

position:185020:1
position: 185020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185916:1
position: 185916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185020-185916:1:exon

TPCCA_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: troC
locus tag: TPCCA_RS00840
old locus tag: TPCCA_0165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881612.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transition metal ABC transporter permease subunit TroC
translation: MHALMRLFSDYTLQNVVLGTLFLGLGSGLVGSFAVLRRQSLFGDAVSHATLPGIVIAFLLTGTKSTEILLLGAALSGLVGTVVMLMVMRTTKIDTDGAQGIVLGVFLGFGFLLLTHVQKSSQAAKAGLNKFILGQAATILQRDVLLIIAMEVVIGLLVLLFWKELKLSTFDRDFSAVQGFSPQLMEFMLTALIVVAVVVGVQAVGVILMSALLTAPAVAARQWTNNLRVLCALAALFGGVSGVSGSVVSAQVPRLSTGPVIVLVLTGIALVSIMLGPQRGVLYQLWRRRRVSLLQEEG
SIO_010081: TPCCA_RS00840
subclass of: SO_0000673
so part of: TPCCA_RS00840
location: 185020..185916
location: region:185020-185916:1
so has part: feature:185020-185916:1:exon

WP_013944863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185020-185916:1:exon

TPCCA_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: troD
locus tag: TPCCA_RS00845
old locus tag: TPCCA_0166
so part of: sequence
location: 185920..187023
location: region:185920-187023:1
so has part: feature:185920-187023:1:exon
subclass of: SO_0000010

position:185920:1
position: 185920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187023:1
position: 187023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185920-187023:1:exon

TPCCA_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: troD
locus tag: TPCCA_RS00845
old locus tag: TPCCA_0166
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342310.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transition metal ABC transporter permease subunit TroD
translation: MTMEVVLIAVVVSVACALCGVFLVLRRISLMSDAISHSVILGIVLGYFLSRTLSSFVPFVGAVIAGICSVICAELLQKTGMVKSDAAVGLVFPAMFGLGVILVSLYAGNVHLDTDAVLLGEIGLAPLDRVSFFAWSLPRSLVQMGSVLCGLLLLLALFFKELKISTFDPVLATSLGFSPTLINYGLMLAVSITCVGAFDSVGAVLVIALMITPPAAALLLTDNLLLMLVLASLLASCASISGLFLAVKIDGSIAGAMATMAGVLFALVYLFSPKHGVVRRRLVMRALKLDLDVATLAVHLATHRYTVERSVECAEVHLTEHVSWSARRAARVVRTALRRGMVERHGALLLLTAQGVSLAQARLDVSV
SIO_010081: TPCCA_RS00845
subclass of: SO_0000673
so part of: TPCCA_RS00845
location: 185920..187023
location: region:185920-187023:1
so has part: feature:185920-187023:1:exon

WP_013944864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185920-187023:1:exon

TPCCA_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: troR
locus tag: TPCCA_RS00850
old locus tag: TPCCA_0167
so part of: sequence
location: 187033..187494
location: region:187033-187494:1
so has part: feature:187033-187494:1:exon
subclass of: SO_0000010

position:187033:1
position: 187033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187494:1
position: 187494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187033-187494:1:exon

TPCCA_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: troR
locus tag: TPCCA_RS00850
old locus tag: TPCCA_0167
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881614.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: manganese/iron-sensitive transcriptional repressor TroR
translation: MSLVSDIAAENYLKTVVKALARSRRERVGTGELSRLLHVTPGTISTMVKRLEKGGYVQRTHRLGCTLTRKGAVFGSAVLRKHRLLESFLSQVLCLEAGVVHKEAEMLEHACSDELIDVIDRYLQYPTRDPHGQPIPRKDTLLDLYVEDDVPGV
SIO_010081: TPCCA_RS00850
subclass of: SO_0000673
so part of: TPCCA_RS00850
location: 187033..187494
location: region:187033-187494:1
so has part: feature:187033-187494:1:exon

WP_010881614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187033-187494:1:exon

TPCCA_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: gpmA
locus tag: TPCCA_RS00855
old locus tag: TPCCA_0168
so part of: sequence
location: 187574..188329
location: region:187574-188329:1
so has part: feature:187574-188329:1:exon
subclass of: SO_0000010

position:187574:1
position: 187574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188329:1
position: 188329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187574-188329:1:exon

TPCCA_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: gpmA
locus tag: TPCCA_RS00855
old locus tag: TPCCA_0168
EC number: 5.4.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881615.1
GO function: GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
translation: MKLVLIRHGESEWNRLNLFTGWTDVPLTPRGESEAQEGGRVLQEAGFDFDLCYTSFLKRAIRTLNFVLQALDREWLPVHKSWKLNERHYGDLQGLNKTETAQKYGEQQVRVWRRSFDVAPPPLTVGDARCPHTQASYRGVCASGRTPVLPFTESLKDTVARVVPYFEEEIKPQMISGQRVLIVAHGNSLRALMKHIESLDETQIMEVNLPTGVPLVYEFEADFTLCGKRFLGNEADVAARAQAVADQGKSN
SIO_010081: TPCCA_RS00855
subclass of: SO_0000673
so part of: TPCCA_RS00855
location: 187574..188329
location: region:187574-188329:1
so has part: feature:187574-188329:1:exon

WP_010881615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187574-188329:1:exon

TPCCA_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00860
old locus tag: TPCCA_t0011
so part of: sequence
location: 188455..188527
location: region:188455-188527:1
so has part: feature:188455-188527:1:exon
subclass of: SO_0000663

position:188455:1
position: 188455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188527:1
position: 188527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188455-188527:1:exon

TPCCA_RS00860
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS00860
old locus tag: TPCCA_t0011
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:188488..188490,aa:Met,seq:cat)
SIO_010081: TPCCA_RS00860
subclass of: SO_0000673
so part of: TPCCA_RS00860
location: 188455..188527
location: region:188455-188527:1
so has part: feature:188455-188527:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188455-188527:1:exon

TPCCA_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00865
old locus tag: TPCCA_0170
so part of: sequence
location: 188648..189457
location: region:188648-189457:1
so has part: feature:188648-189457:1:exon
subclass of: SO_0000010

position:188648:1
position: 188648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189457:1
position: 189457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188648-189457:1:exon

TPCCA_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00865
old locus tag: TPCCA_0170
EC number: 3.2.2.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944865.1
GO function: GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO process: GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]; GO:0009164 - nucleoside catabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5'-methylthioadenosine/adenosylhomocysteine nucleosidase
translation: MTVGVFAALGEEVARVRECLGGVGTERAGLTFYVVSVGALQVVYVCGGVGKVNAALCTQLLISEFGARVLINTGIAGALDERLCVFDVLVSVDAVQHDVDVTAFGYQKGRIPRMDSVEWTANTALRYLVREAFDLCTRDPEWTEGACVLSGSGDPPSRVSRLVEGRVASGDLFVSDAQTRARIIREFGAHGVEMEGAAFAHVASVNGVPFVIIRCISDGAGAEQDVSMSYKEFSTRAARRSALLTLRVLERLSALRTSVVASLFPMVVV
SIO_010081: TPCCA_RS00865
subclass of: SO_0000673
so part of: TPCCA_RS00865
location: 188648..189457
location: region:188648-189457:1
so has part: feature:188648-189457:1:exon

WP_013944865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188648-189457:1:exon

TPCCA_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00870
old locus tag: TPCCA_0171
so part of: sequence
location: 189556..189984
location: region:189556-189984:1
so has part: feature:189556-189984:1:exon
subclass of: SO_0000010

position:189556:1
position: 189556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189984:1
position: 189984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189556-189984:1:exon

TPCCA_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00870
old locus tag: TPCCA_0171
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881618.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0010181 - FMN binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FMN-binding protein
translation: MVKRGGAFALCLAVLLGACSFSSIPNGTYRATYQDFDENGWKDFLEVTFDGGKMVQVVYDYQHKEGRFKSQDADYHRVMYASSGIGPEKAFRELADALLEKGNPEMVDVVTGATVSSQSFRRLGAALLQSARRGEKEAIISR
SIO_010081: TPCCA_RS00870
subclass of: SO_0000673
so part of: TPCCA_RS00870
location: 189556..189984
location: region:189556-189984:1
so has part: feature:189556-189984:1:exon

WP_010881618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189556-189984:1:exon

TPCCA_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00875
old locus tag: TPCCA_0172
so part of: sequence
location: complement(189974..191356)
location: region:189974-191356:-1
so has part: feature:189974-191356:-1:exon
subclass of: SO_0000010

position:189974:-1
position: 189974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191356:-1
position: 191356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189974-191356:-1:exon

TPCCA_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00875
old locus tag: TPCCA_0172
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342312.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diguanylate cyclase
translation: MSRTCVRAYAVFAIAIMVLTVAWFAFSISQAIQRNTVGAQQRFAQVIRRIAPRVTSKRQLTDAEADFIQNLCKNDGLIMALNIFSNRVQLFSWTYDDLMFVAVGGSELVPRSSSFFIKIFSGRVPYQAKDECLSFTAALRVLTPANIFSRGCVVFLVMLTLTISSMVFLVIEYLSVRRFQCAQGDARPRPAGPQGTASASRTDEAQVPPGTPPECQCPSFETHGQDLASKESVSDLEGLHLYNHSDEELFSIHDSVFQEHTGGEGRMSSSSGEEGCGQTLLPVHEKKSTYGLFNPLTGVGWRAYLEERLEAELGRATASEQDLTLMIVQVEHPAHQTAVADTAKKLVEFFKFRDMLFEFEGTCCFAGIVQDASLEEAMVLARDIHKELCGAIESARVLIGIATRTSRLTTAAHLIEEAHASVKRAREDPAHPIIAFEAHHQCGRPYRSSAYRDVPDRSTC
SIO_010081: TPCCA_RS00875
subclass of: SO_0000673
so part of: TPCCA_RS00875
location: complement(189974..191356)
location: region:189974-191356:-1
so has part: feature:189974-191356:-1:exon

WP_013944867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189974-191356:-1:exon

TPCCA_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00880
old locus tag: TPCCA_0174
so part of: sequence
location: complement(191349..192869)
location: region:191349-192869:-1
so has part: feature:191349-192869:-1:exon
subclass of: SO_0000010

position:191349:-1
position: 191349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192869:-1
position: 192869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191349-192869:-1:exon

TPCCA_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00880
old locus tag: TPCCA_0174
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342313.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF115 domain-containing protein
translation: MTNVFKKNIRALRMRYQDIALTLERTHSNGIYAGTLTAHTGENIPFFRNNRTLHSRYNPWIEAERTLPAQPCFILFCGIGAGIHISVFLEKFRHACCAVCEFDYASFRALLEQVDLTHIIVQERVHFLHPLTHGSASQEIAQCYMPIIHGNFFVHYLQPWKAFFPTSEQKIAELTSQAMKIIRADFSVQVHFGKLWMRNALLNLRYAQIFTPKLPNINTQTEAIILGAGPSLEKGIEKIRSHRDVYTIFACDTAFPVCCTGGLMPDFFISIDPQYISYAHTMCSFPSQVTAIFDICACPCAVRSFYLNGNSLIFTGGGHPFSVYANRFSSLPFLETSSGTVAGAAYSVASFLGFTRITSVGTDFSYTNGKPYARGTYLSKQFEQKILRISPLETQFCNLMFRTPTRQDNTQGGITYSNEILDQYKRNFDQITPGARPWHAADFRAFPYKQFINFFHAQLRSKHAAALLAMLPFITWYKTKRTPQAPIFRILELVLEDVLRYTGCNE
SIO_010081: TPCCA_RS00880
subclass of: SO_0000673
so part of: TPCCA_RS00880
location: complement(191349..192869)
location: region:191349-192869:-1
so has part: feature:191349-192869:-1:exon

WP_013944868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191349-192869:-1:exon

TPCCA_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00885
old locus tag: TPCCA_0177
so part of: sequence
location: complement(192866..194278)
location: region:192866-194278:-1
so has part: feature:192866-194278:-1:exon
subclass of: SO_0000010

position:192866:-1
position: 192866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194278:-1
position: 194278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192866-194278:-1:exon

TPCCA_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00885
old locus tag: TPCCA_0177
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342314.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF115 domain-containing protein
translation: MSLNLHSKYNPRREAERFVAAILEGRRIVVITEPGESYTAEFLRARFPHAKLIAVRYTNDAFTSSDIQWDAVWRPDCGSLHSFLINHIPDELLGQTAFVPWEPANRIWRAQAQSTWQEITYTIKIIQSEIATRIYFGKRWLLNTLRNVFFLERPVRVCLTAPEVLCVAAGFGLEQITRVGLPIVAVSSALQALLYRNISPDICMSTDGSFWAAEHFPPAPTLPVLFPLEACIPPRVFKYSPISLLNYHSHTEHFFLQHLHIPSVSAQRHGSVMGTALEYLLQCGVHSIYLAGLDLHPGKGFQHARPHASFKRFNPKRTEPLATCIAGNFDNRSLETYAHWFYSLPQEKTQKLTRLNTEHAPPSNVRTITYEDFSQHAFAKKDTFTFSDGPPISRIHKKAVLRHYFERIARSAHHARIASSIASSGIEKEAFEFLAYAELLHLRKNPSQGTQTLIHKVRHEIVQLRNKLNI
SIO_010081: TPCCA_RS00885
subclass of: SO_0000673
so part of: TPCCA_RS00885
location: complement(192866..194278)
location: region:192866-194278:-1
so has part: feature:192866-194278:-1:exon

WP_013944869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192866-194278:-1:exon

TPCCA_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00890
old locus tag: TPCCA_0178
so part of: sequence
location: complement(194269..195195)
location: region:194269-195195:-1
so has part: feature:194269-195195:-1:exon
subclass of: SO_0000010

position:194269:-1
position: 194269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195195:-1
position: 195195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194269-195195:-1:exon

TPCCA_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00890
old locus tag: TPCCA_0178
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944870.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGLIARASCIRRSSGVSCEYYRLELQFVQLVESLGIPRAGFLFLTEERMFDLRFPFGIDTTTFYRMRVPTSLLSPGLPAEQWTTLFRQELTELQGYFSSHLFSTLRALHLYPFSAGSVRVYLVLFDTRTDVEEGALAADLHGDASGEERVRSFILAVQARFSFIEASRPVYPRQPELAPSCSQLEFALNNQRMANLFTISINQSALPPAVLQEELSMVRRCCALSNQLLTLVGNDNLASCVASRELRVVVFSSFPVDPELYLNQLTRGVSAYFVNHAENSLLITSSGTTRAQTDVLRFLQYETGETCR
SIO_010081: TPCCA_RS00890
subclass of: SO_0000673
so part of: TPCCA_RS00890
location: complement(194269..195195)
location: region:194269-195195:-1
so has part: feature:194269-195195:-1:exon

WP_013944870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194269-195195:-1:exon

TPCCA_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00895
old locus tag: TPCCA_0179
so part of: sequence
location: complement(195195..196901)
location: region:195195-196901:-1
so has part: feature:195195-196901:-1:exon
subclass of: SO_0000010

position:196901:-1
position: 196901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195195-196901:-1:exon

TPCCA_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00895
old locus tag: TPCCA_0179
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460526.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGSESAEMDSPRATARPQEQGEDRAWDACGVWVKVPPEAQEPPVSSGGPEDPEAPAQHAPPGARVDAVRHHVYRALPVQSSAEGSRGFVDLSVEDEVLARGCSHAPGGESSSDQAADAPVGDAAYSEVPSFDDLVTRTAQSQDDRVDLSAAMSSVVTEEPPEPRGCSMPCPSGSCDTTEFDDLLSSLSHDAPEYPVDSDPITYSASEPSSEGPVRGAPFSDVDAVAQSLMGDAQVAAQGAQASTSGDASTDLLLKIAQEISSIRADLDQLKGTFSQQAGAEPAQAPATAPAPEGTEAAYSGFFCDDDPDETIALTNDELNNILITSEFTEEDGKDSAADAFGGELSGFESSHIESAAGDFSYLEEDDHAAARVAQEQWVQQGRATLGNEVFDVKEQGAHADRDAAAGPSPVAKDDASPEAQRAHVSSTGLDAAGAEQPLNTENVFDDEDTQREDASFPLPEEQELNVSVPSLEFSAPHAVETAASESSEVATPVAIGSPPQSEAARPAQGDSANLAPPLSKSLADEVRSVLGYMDRLLESLPEEKIEEFARSEYFHTYKHLFDELGIS
SIO_010081: TPCCA_RS00895
subclass of: SO_0000673
so part of: TPCCA_RS00895
location: complement(195195..196901)
location: region:195195-196901:-1
so has part: feature:195195-196901:-1:exon

WP_245522157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195195-196901:-1:exon

TPCCA_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00900
old locus tag: TPCCA_0181
so part of: sequence
location: 197172..197615
location: region:197172-197615:1
so has part: feature:197172-197615:1:exon
subclass of: SO_0000010

position:197172:1
position: 197172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197615:1
position: 197615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197172-197615:1:exon

TPCCA_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00900
old locus tag: TPCCA_0181
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881628.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septum formation initiator family protein
translation: MRVYLRVVLPLSLALNSYGVLAFFWGERGVCAMRLLEREKKELVHHIQTLAERGRDLAAVVDALSFDEETIGAYARQLGYVRAGDVLVRPVNFTVAHMHTLDSGDARPLVAPACFSDTRCKVYALCVGFFVVLLQLLWGSARAYFKT
SIO_010081: TPCCA_RS00900
subclass of: SO_0000673
so part of: TPCCA_RS00900
location: 197172..197615
location: region:197172-197615:1
so has part: feature:197172-197615:1:exon

WP_013944872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197172-197615:1:exon

TPCCA_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00905
old locus tag: TPCCA_0182
so part of: sequence
location: 197596..198234
location: region:197596-198234:1
so has part: feature:197596-198234:1:exon
subclass of: SO_0000010

position:197596:1
position: 197596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198234:1
position: 198234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197596-198234:1:exon

TPCCA_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00905
old locus tag: TPCCA_0182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342316.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-threonylcarbamoyladenylate synthase
translation: MRILKHEAQSAHAAARALKAGALVALPTDTVYGFSGLVPHAVPDLICLKARGCTETEGNRREGYPFIALLADPQDVVIYTGTRLPAEFRALWPGPYTFVLRMQDGATQAFRCPADLWLRSVIRAVGGAIFSTSANRHGKPPLQDAQDIDHIFGKHLALTVDAGPLTGSPSAVIDLTHPVPRVLRAGAAPLPLAGLERRDSPSLPHVGEVRKE
SIO_010081: TPCCA_RS00905
subclass of: SO_0000673
so part of: TPCCA_RS00905
location: 197596..198234
location: region:197596-198234:1
so has part: feature:197596-198234:1:exon

WP_013944873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197596-198234:1:exon

TPCCA_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00910
old locus tag: TPCCA_0183
so part of: sequence
location: complement(198237..199082)
location: region:198237-199082:-1
so has part: feature:198237-199082:-1:exon
subclass of: SO_0000010

position:198237:-1
position: 198237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199082:-1
position: 199082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198237-199082:-1:exon

TPCCA_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00910
old locus tag: TPCCA_0183
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881630.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKGIRSSRLLILFVLFAHAVHAAPRVGVYRLEVSGVPAHTETTINDALFSFIRELRGYHVVDCREQAVPHRFPEKGSLDYIFCGAMNLTPEGIRLAVALKGKDHNATRLLSKTYETAARILLDSRHLVRDVFDRSVPLTGNQTKTSGMRHTRAGEESISSLDALAGSWHSTEEEERIVIVSEGRGIAVLRSGLSVPLKLKISDGVLVVSQKGAVNARQFSHFPPEIAQKLAQEARPLQWRFTKISGNNRLSGVRTAPVVRGAGHTASVEYEEVPEEWVRN
SIO_010081: TPCCA_RS00910
subclass of: SO_0000673
so part of: TPCCA_RS00910
location: complement(198237..199082)
location: region:198237-199082:-1
so has part: feature:198237-199082:-1:exon

WP_013944874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198237-199082:-1:exon

TPCCA_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: smpB
locus tag: TPCCA_RS00915
old locus tag: TPCCA_0184
so part of: sequence
location: complement(199087..199551)
location: region:199087-199551:-1
so has part: feature:199087-199551:-1:exon
subclass of: SO_0000010

position:199087:-1
position: 199087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199551:-1
position: 199551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199087-199551:-1:exon

TPCCA_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: smpB
locus tag: TPCCA_RS00915
old locus tag: TPCCA_0184
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944875.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006450 - regulation of translational fidelity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SsrA-binding protein
translation: MRGTGTHLIAKNRKAFFNYHVEDRLECGIALEGTEVKSVRAGHLSFPDAFAEMCGGELWLKNVHIAEYVHACSFAPNPDRMRKLLAHRDQIARLKRKVEEKGYTLVPLEFYLKAGRVKVALGICKGKKLFDKRAQIKARDNARELSRSLCERHH
SIO_010081: TPCCA_RS00915
subclass of: SO_0000673
so part of: TPCCA_RS00915
location: complement(199087..199551)
location: region:199087-199551:-1
so has part: feature:199087-199551:-1:exon

WP_013944875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199087-199551:-1:exon

TPCCA_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: lepB
locus tag: TPCCA_RS00920
old locus tag: TPCCA_0185
so part of: sequence
location: 199720..200346
location: region:199720-200346:1
so has part: feature:199720-200346:1:exon
subclass of: SO_0000010

position:199720:1
position: 199720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200346:1
position: 200346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199720-200346:1:exon

TPCCA_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: lepB
locus tag: TPCCA_RS00920
old locus tag: TPCCA_0185
EC number: 3.4.21.89
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944876.1
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase I
translation: MGFFLFYLFITTHVVAAYRIQADSMQPTLSAGDCVLASSLFRFARIKRGDLVLATPLEKEDIGLFKRAMNAVLGFVSLQLYRPFGAADRMFSRPQMRRVVGLPGDTVYMRDFVLYVKPHGQQHFLTEFEVSAVSYDVRKGVLPEHWSERLPFSGFMEEMQLDEHSYFVLCDNRIVSSDSRLWGAIDGSTQIKAKAFMRYFPFGAFGVL
SIO_010081: TPCCA_RS00920
subclass of: SO_0000673
so part of: TPCCA_RS00920
location: 199720..200346
location: region:199720-200346:1
so has part: feature:199720-200346:1:exon

WP_245522158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199720-200346:1:exon

TPCCA_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00925
old locus tag: TPCCA_0186
so part of: sequence
location: 200365..201582
location: region:200365-201582:1
so has part: feature:200365-201582:1:exon
subclass of: SO_0000010

position:200365:1
position: 200365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201582:1
position: 201582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200365-201582:1:exon

TPCCA_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00925
old locus tag: TPCCA_0186
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944877.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: coproporphyrinogen-III oxidase family protein
translation: MVRAAHRAVPFIMSSEVGASLYVHIPFCAQRCAYCDFYSLVRSTYFRPHQPCPHFIDRLLQDVALQRECFGVQGWQTVYMGGGTPSLLAPQDIRRFCVALRAAQRYPIQEFTLEVNPEDVTEEFLCACAEGGVNRLSLGVQSLRDEVLRAERRAASAECARTALRVMTANARFFSGGVRISADLIAGLRGQTARMVREDIDELLSFGLRHVSLYGLCVPHPTETQEERIAALWAHGSAYLVRAGFNRYELSNFARTAADESAHNRAYWRMAPHAGVGPGAVGTRFVNLSLSKEGVWAIRSTVRKHLGQYLAEVCRENVYEHEFLTEHMCVQEALLMGLRLEQGLDVVTFRARFGKGIEAYIGKTIARWQCHGRMQWTATSLRLSAQARVFLDSFLREAFAELART
SIO_010081: TPCCA_RS00925
subclass of: SO_0000673
so part of: TPCCA_RS00925
location: 200365..201582
location: region:200365-201582:1
so has part: feature:200365-201582:1:exon

WP_013944877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200365-201582:1:exon

TPCCA_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: tuf
locus tag: TPCCA_RS00930
old locus tag: TPCCA_0187
so part of: sequence
location: 201946..203133
location: region:201946-203133:1
so has part: feature:201946-203133:1:exon
subclass of: SO_0000010

position:201946:1
position: 201946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203133:1
position: 203133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201946-203133:1:exon

TPCCA_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: tuf
locus tag: TPCCA_RS00930
old locus tag: TPCCA_0187
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881634.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor Tu
translation: MAKEKFARTKVHMNVGTIGHVDHGKTTLSAAITSYCAKKFGDKQLKYDEIDNAPEEKARGITINTRHLEYQSDRRHYAHIDCPGHADYVKNMITGAAQMDGGILVVSAPDGVMPQTKEHLLLARQVGVPSIIVFLNKVDLVDDPELLELVEEEVRDALAGYGFSRETPIVKGSAFKALQDGASPEDAACIEELLAAMDSYFEDPVRDDARPFLLSIEDVYTISGRGTVVTGRIECGVISLNEEVEIVGIKPTKKTVVTGIEMFNKLLDQGIAGDNVGLLLRGVDKKEVERGQVLSKPGSIKPHTKFEAQIYVLSKEEGGRHSPFFQGYRPQFYFRTTDITGTISLPEGVDMVKPGDNTKIIGELIHPIAMDKGLKLAIREGGRTIASGQVTEILL
SIO_010081: TPCCA_RS00930
subclass of: SO_0000673
so part of: TPCCA_RS00930
location: 201946..203133
location: region:201946-203133:1
so has part: feature:201946-203133:1:exon

WP_010881634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201946-203133:1:exon

TPCCA_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpsJ
locus tag: TPCCA_RS00935
old locus tag: TPCCA_0188
so part of: sequence
location: 203205..203513
location: region:203205-203513:1
so has part: feature:203205-203513:1:exon
subclass of: SO_0000010

position:203205:1
position: 203205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203513:1
position: 203513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203205-203513:1:exon

TPCCA_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpsJ
locus tag: TPCCA_RS00935
old locus tag: TPCCA_0188
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881635.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S10
translation: MARERIRVKLCGFDVELVDQSSRAIVHAVQKAGAEVLGPIPLPTRMHKFTVLRSPHVNKKSREQFEMRTHKRLIDIIEPSQEVMNALMGLELSAGVDVRIKQ
SIO_010081: TPCCA_RS00935
subclass of: SO_0000673
so part of: TPCCA_RS00935
location: 203205..203513
location: region:203205-203513:1
so has part: feature:203205-203513:1:exon

WP_010881635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203205-203513:1:exon

TPCCA_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rplC
locus tag: TPCCA_RS00940
old locus tag: TPCCA_0189
so part of: sequence
location: 203560..204186
location: region:203560-204186:1
so has part: feature:203560-204186:1:exon
subclass of: SO_0000010

position:203560:1
position: 203560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204186:1
position: 204186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203560-204186:1:exon

TPCCA_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rplC
locus tag: TPCCA_RS00940
old locus tag: TPCCA_0189
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342318.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L3
translation: MVGLIGQKVGMTQIFDARGCVTPVTVIRVEHNVVVGLKDVERFGYSAVILGTGCMKKSHISKPYAGQFAERIPPVRVMREFRGFTLDVSVGQVLDVRVLESVRYLDVCALSKGKGFQGVVKRWGFSGGRSSHGSKFHREAGSTGQCTSPGRTFKNVKMPGRMGAERVTVQNLRIERIDVGLGVVMVRGAVPGRNKATVFLRTAVKRER
SIO_010081: TPCCA_RS00940
subclass of: SO_0000673
so part of: TPCCA_RS00940
location: 203560..204186
location: region:203560-204186:1
so has part: feature:203560-204186:1:exon

WP_013944879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203560-204186:1:exon

TPCCA_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rplD
locus tag: TPCCA_RS00945
old locus tag: TPCCA_0190
so part of: sequence
location: 204200..204850
location: region:204200-204850:1
so has part: feature:204200-204850:1:exon
subclass of: SO_0000010

position:204200:1
position: 204200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204850:1
position: 204850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204200-204850:1:exon

TPCCA_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rplD
locus tag: TPCCA_RS00945
old locus tag: TPCCA_0190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342319.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L4
translation: MEKTVYSVEGVALRSIELDESVFGRSVNRGVIYYAINSELSNKRLGTACTKGRSEVHGSNTKPYKQKGTGRARRGDKKSPLLVGGGTIFGPKPRDFHYALPKKVKRLAMKSLLSLKAQGDALTVIEDFTVESGKTRDLIQVLRHFAQKERTVFILQNDDALLKRAGRNIPTLSFLSYNRLRAHDLFYGRKVLVLETAVHKIADFYRSKDAAQDGTY
SIO_010081: TPCCA_RS00945
subclass of: SO_0000673
so part of: TPCCA_RS00945
location: 204200..204850
location: region:204200-204850:1
so has part: feature:204200-204850:1:exon

WP_013944880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204200-204850:1:exon

TPCCA_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS00950
old locus tag: TPCCA_0191
so part of: sequence
location: 204837..205121
location: region:204837-205121:1
so has part: feature:204837-205121:1:exon
subclass of: SO_0000010

position:204837:1
position: 204837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205121:1
position: 205121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204837-205121:1:exon

TPCCA_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS00950
old locus tag: TPCCA_0191
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881638.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L23
translation: MEHTDVVIAPVLTEKSNALRQQGKYVFRVAARATKIQIKQAVTQLFGVTVRRCTVMNVFGKKRRVRHRTGRTSGWKKAIVHVAAGQSIGVLERA
SIO_010081: TPCCA_RS00950
subclass of: SO_0000673
so part of: TPCCA_RS00950
location: 204837..205121
location: region:204837-205121:1
so has part: feature:204837-205121:1:exon

WP_010881638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204837-205121:1:exon

TPCCA_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rplB
locus tag: TPCCA_RS00955
old locus tag: TPCCA_0192
so part of: sequence
location: 205177..205998
location: region:205177-205998:1
so has part: feature:205177-205998:1:exon
subclass of: SO_0000010

position:205177:1
position: 205177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205998:1
position: 205998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205177-205998:1:exon

TPCCA_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rplB
locus tag: TPCCA_RS00955
old locus tag: TPCCA_0192
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881639.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L2
translation: MALKMYRPMTAGLRGRVDLCRAELTARTPEKSLTRGKPAKAGRGAGGRISVRHRGGGHKRRYRDIDFKRDLHDIPGTVKTIEYDPNRSVNIALVFYANGQKRYILAPKGLKVGQRVVSGEKVPLEPANALPLGVIPVGFTVHNVELTIGKGGQIARSAGTRAVIAAKDGGYVMLRLPSGEARLVHRRCYATIGELGNEDHMNTALGKAGRARWRGVRPTVRGMAMNPVDHPLGGGEGRGKGRNPVTPWGQPCRGYKTRKKRRVSDRFIVSKRK
SIO_010081: TPCCA_RS00955
subclass of: SO_0000673
so part of: TPCCA_RS00955
location: 205177..205998
location: region:205177-205998:1
so has part: feature:205177-205998:1:exon

WP_013944881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205177-205998:1:exon

TPCCA_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpsS
locus tag: TPCCA_RS00960
old locus tag: TPCCA_0193
so part of: sequence
location: 206008..206295
location: region:206008-206295:1
so has part: feature:206008-206295:1:exon
subclass of: SO_0000010

position:206008:1
position: 206008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206295:1
position: 206295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206008-206295:1:exon

TPCCA_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpsS
locus tag: TPCCA_RS00960
old locus tag: TPCCA_0193
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881640.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S19
translation: MSRSVKKGPFVDKKLYKRVVEMNKAANQRNKKVIKSYSRCSTIIPEMVGFTISVHNGKSWIPVYITEEFVGHKLGEFSPTRVFRGHSGSDKKVGR
SIO_010081: TPCCA_RS00960
subclass of: SO_0000673
so part of: TPCCA_RS00960
location: 206008..206295
location: region:206008-206295:1
so has part: feature:206008-206295:1:exon

WP_010881640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206008-206295:1:exon

TPCCA_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rplV
locus tag: TPCCA_RS00965
old locus tag: TPCCA_0194
so part of: sequence
location: 206304..206678
location: region:206304-206678:1
so has part: feature:206304-206678:1:exon
subclass of: SO_0000010

position:206304:1
position: 206304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206678:1
position: 206678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206304-206678:1:exon

TPCCA_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rplV
locus tag: TPCCA_RS00965
old locus tag: TPCCA_0194
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881641.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L22
translation: MTERVTYRAKTKFLVASPTKVRPVANVVKCKPYVRAMALLGHLPHKGARLISKVMKSAASNAIDRDKRLDEERLFVRDIQIDEGPRLKRLWCRGRGRGDVQLKRMCHITVVVEESVRTKDGSKG
SIO_010081: TPCCA_RS00965
subclass of: SO_0000673
so part of: TPCCA_RS00965
location: 206304..206678
location: region:206304-206678:1
so has part: feature:206304-206678:1:exon

WP_010881641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206304-206678:1:exon

TPCCA_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpsC
locus tag: TPCCA_RS00970
old locus tag: TPCCA_0195
so part of: sequence
location: 206662..207405
location: region:206662-207405:1
so has part: feature:206662-207405:1:exon
subclass of: SO_0000010

position:206662:1
position: 206662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207405:1
position: 207405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206662-207405:1:exon

TPCCA_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpsC
locus tag: TPCCA_RS00970
old locus tag: TPCCA_0195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944882.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S3
translation: MGQKVSPIGLRLGINKVWSSRWYAGPREYAALLHEDLRIRSMIRSFPECKNADIAEVEIVRHPQRVTVVMHTARPGVVIGAKGVNIEKIGAEVQKRLNKKVQIKVKEIKRMELNAYLVAQNVARQLTARVSFRKCLRHACAGTMKSGAQGVKIRVSGRLGGAEMSRTEEIKEGRTPLHTLRADIDYGFAEAHTTYGSIGVKVWLYSGMMYGNECRKDVGSLLRRSRRESGQRSDELVRDERTHAERG
SIO_010081: TPCCA_RS00970
subclass of: SO_0000673
so part of: TPCCA_RS00970
location: 206662..207405
location: region:206662-207405:1
so has part: feature:206662-207405:1:exon

WP_013944882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206662-207405:1:exon

TPCCA_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rplP
locus tag: TPCCA_RS00975
old locus tag: TPCCA_0196
so part of: sequence
location: 207409..207828
location: region:207409-207828:1
so has part: feature:207409-207828:1:exon
subclass of: SO_0000010

position:207409:1
position: 207409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207828:1
position: 207828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207409-207828:1:exon

TPCCA_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rplP
locus tag: TPCCA_RS00975
old locus tag: TPCCA_0196
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014343531.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L16
translation: MALSPKRVKYRKVQRGRVKGDATRCNAVDFGAYALVCLEPFWLTSRQIEAARVALNRRIKRGGKLWIRVFPDKPYSKKPAETRMGKGKGSPEYWVAVVKPGTVLFELMGVERALAEQAMLLAGSKLPIKTRFAERVQEI
SIO_010081: TPCCA_RS00975
subclass of: SO_0000673
so part of: TPCCA_RS00975
location: 207409..207828
location: region:207409-207828:1
so has part: feature:207409-207828:1:exon

WP_010881643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207409-207828:1:exon

TPCCA_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpmC
locus tag: TPCCA_RS00980
old locus tag: TPCCA_0197
so part of: sequence
location: 207843..208061
location: region:207843-208061:1
so has part: feature:207843-208061:1:exon
subclass of: SO_0000010

position:207843:1
position: 207843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208061:1
position: 208061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207843-208061:1:exon

TPCCA_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpmC
locus tag: TPCCA_RS00980
old locus tag: TPCCA_0197
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881644.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L29
translation: MGRGECAQLSYSELLSRRRELERKYLDLRFQLVVEHVDNKLMKRILRRQIAVVNTFLRHKELTELEKRGVRE
SIO_010081: TPCCA_RS00980
subclass of: SO_0000673
so part of: TPCCA_RS00980
location: 207843..208061
location: region:207843-208061:1
so has part: feature:207843-208061:1:exon

WP_013944883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207843-208061:1:exon

TPCCA_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpsQ
locus tag: TPCCA_RS00985
old locus tag: TPCCA_0198
so part of: sequence
location: 208076..208330
location: region:208076-208330:1
so has part: feature:208076-208330:1:exon
subclass of: SO_0000010

position:208076:1
position: 208076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208330:1
position: 208330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208076-208330:1:exon

TPCCA_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpsQ
locus tag: TPCCA_RS00985
old locus tag: TPCCA_0198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881645.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S17
translation: MKRPERRTLVGLVTSDKMHKTVTVRITTKKLHALYKKYVSRSKKYQAHDEENTARAGDVVRIAESRPLSRRKRWRLVEIVERAK
SIO_010081: TPCCA_RS00985
subclass of: SO_0000673
so part of: TPCCA_RS00985
location: 208076..208330
location: region:208076-208330:1
so has part: feature:208076-208330:1:exon

WP_010881645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208076-208330:1:exon

TPCCA_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rplN
locus tag: TPCCA_RS00990
old locus tag: TPCCA_0199
so part of: sequence
location: 208343..208711
location: region:208343-208711:1
so has part: feature:208343-208711:1:exon
subclass of: SO_0000010

position:208343:1
position: 208343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208711:1
position: 208711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208343-208711:1:exon

TPCCA_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rplN
locus tag: TPCCA_RS00990
old locus tag: TPCCA_0199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881646.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L14
translation: MIQVQSRLNVADNSGARLVQCIKVVGGSRRRYASVGDIIVVAVKDALPTSAIKKGSVEKAVIVRVSKEYRRVDGTYIRFDDNACVVIDANGNPKGRRIFGPVARELRDMDFTKIVSLAPEVL
SIO_010081: TPCCA_RS00990
subclass of: SO_0000673
so part of: TPCCA_RS00990
location: 208343..208711
location: region:208343-208711:1
so has part: feature:208343-208711:1:exon

WP_013944884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208343-208711:1:exon

TPCCA_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rplX
locus tag: TPCCA_RS00995
old locus tag: TPCCA_0200
so part of: sequence
location: 208723..209034
location: region:208723-209034:1
so has part: feature:208723-209034:1:exon
subclass of: SO_0000010

position:208723:1
position: 208723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209034:1
position: 209034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208723-209034:1:exon

TPCCA_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rplX
locus tag: TPCCA_RS00995
old locus tag: TPCCA_0200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015613206.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L24
translation: MGKTVKIRKDDMVLVIAGKDRGKRGAVLRVLRDVDRVLVQGLNMRKKTIRRKSAQDEGGIMEVEAPIHISNVMIMGKKGPTRVGYRMENGKKVRVCRKTGEVL
SIO_010081: TPCCA_RS00995
subclass of: SO_0000673
so part of: TPCCA_RS00995
location: 208723..209034
location: region:208723-209034:1
so has part: feature:208723-209034:1:exon

WP_010881647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208723-209034:1:exon

TPCCA_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rplE
locus tag: TPCCA_RS01000
old locus tag: TPCCA_0201
so part of: sequence
location: 209031..209588
location: region:209031-209588:1
so has part: feature:209031-209588:1:exon
subclass of: SO_0000010

position:209031:1
position: 209031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209588:1
position: 209588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209031-209588:1:exon

TPCCA_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rplE
locus tag: TPCCA_RS01000
old locus tag: TPCCA_0201
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881648.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L5
translation: MTDHSCIPELKVRYVQQIVPDMMRDFGYSTVMQVPRLLKIVLSMGLGEALANRKLLDASVADLGIISGQHAVKTRARKSIANFKLREGNEIGVMVTLRRSRMYEFLHRLINVALPRVKDFRGVSPRGFDGHGNYSMGITEQIIFPEIDFDKIERISGLNVNVVTSAQTDQEARTLLTKLGMPFRK
SIO_010081: TPCCA_RS01000
subclass of: SO_0000673
so part of: TPCCA_RS01000
location: 209031..209588
location: region:209031-209588:1
so has part: feature:209031-209588:1:exon

WP_013944885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209031-209588:1:exon

TPCCA_RS05220
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05220
so part of: sequence
location: 209600..209785
location: region:209600-209785:1
so has part: feature:209600-209785:1:exon
subclass of: SO_0000010

position:209600:1
position: 209600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209785:1
position: 209785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209600-209785:1:exon

TPCCA_RS05220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002557082.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type Z 30S ribosomal protein S14
translation: MATVAMINKAKATPKYATRRYNRCGVCGRPRGYMRRFQLCRLCFRKLASEGQIPGVTKSSW
SIO_010081: TPCCA_RS05220
subclass of: SO_0000673
so part of: TPCCA_RS05220
location: 209600..209785
location: region:209600-209785:1
so has part: feature:209600-209785:1:exon

WP_010881649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209600-209785:1:exon

TPCCA_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpsH
locus tag: TPCCA_RS01005
old locus tag: TPCCA_0203
so part of: sequence
location: 209801..210199
location: region:209801-210199:1
so has part: feature:209801-210199:1:exon
subclass of: SO_0000010

position:209801:1
position: 209801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210199:1
position: 210199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209801-210199:1:exon

TPCCA_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpsH
locus tag: TPCCA_RS01005
old locus tag: TPCCA_0203
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881650.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S8
translation: MGVSDPVADMLTKIRNAARAGHEKVDVPSSKLKVEIVKILKTEGYIRNFRKVEEDGSGCIRVFLKYDDNETSVIHGIERISTPGRRVYSGYKTLRRVYNGYGTLIVSTSLGVTTGRHAREQRVGGELICKVW
SIO_010081: TPCCA_RS01005
subclass of: SO_0000673
so part of: TPCCA_RS01005
location: 209801..210199
location: region:209801-210199:1
so has part: feature:209801-210199:1:exon

WP_013944887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209801-210199:1:exon

TPCCA_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rplF
locus tag: TPCCA_RS01010
old locus tag: TPCCA_0204
so part of: sequence
location: 210209..210748
location: region:210209-210748:1
so has part: feature:210209-210748:1:exon
subclass of: SO_0000010

position:210209:1
position: 210209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210748:1
position: 210748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210209-210748:1:exon

TPCCA_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rplF
locus tag: TPCCA_RS01010
old locus tag: TPCCA_0204
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944888.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L6
translation: MSRIGKVPVSIPRGVHVRVSSGVVEVEGPKGVLSCAFLPVVTVRVEQEYAIVARCDDSKRARACHGLYRKLLSNMVVGVSEGFSKTLVITGIGYRAEVQGRVLVMALGYSNDFTVLIPSGIEVRVESSTRVIVSGVSKERVGEFAAQLRRLRLPEAYKGKGIRYDYETIVRKVGKSGVK
SIO_010081: TPCCA_RS01010
subclass of: SO_0000673
so part of: TPCCA_RS01010
location: 210209..210748
location: region:210209-210748:1
so has part: feature:210209-210748:1:exon

WP_013944888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210209-210748:1:exon

TPCCA_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rplR
locus tag: TPCCA_RS01015
old locus tag: TPCCA_0205
so part of: sequence
location: 210757..211119
location: region:210757-211119:1
so has part: feature:210757-211119:1:exon
subclass of: SO_0000010

position:210757:1
position: 210757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211119:1
position: 211119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210757-211119:1:exon

TPCCA_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rplR
locus tag: TPCCA_RS01015
old locus tag: TPCCA_0205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881652.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L18
translation: MLRKCSDKQRKRMKRKVHIRKRVYGTAVRPRMTVFRSNRNISVQVIDDDARSTLASVSTLEKDFVLLRANVSSGLQIGEEIGRRLLEKHIDTVIFDRNGYLYHGVVAAVADGARKAGVRF
SIO_010081: TPCCA_RS01015
subclass of: SO_0000673
so part of: TPCCA_RS01015
location: 210757..211119
location: region:210757-211119:1
so has part: feature:210757-211119:1:exon

WP_013944889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210757-211119:1:exon

TPCCA_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpsE
locus tag: TPCCA_RS01020
old locus tag: TPCCA_0206
so part of: sequence
location: 211128..211646
location: region:211128-211646:1
so has part: feature:211128-211646:1:exon
subclass of: SO_0000010

position:211128:1
position: 211128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211646:1
position: 211646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211128-211646:1:exon

TPCCA_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpsE
locus tag: TPCCA_RS01020
old locus tag: TPCCA_0206
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881653.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S5
translation: MDRRRDFGKDRLRDKEFTEKLIKLNRTAKVVKGGRRFSFSALTVVGDQKGRVGFGFGKAGDVSEAIRKSVERAKRSMVLFPLKDGTIPHEVQAKFKGSLVLLRPACSGTGIIAGGTVRAIMEVAGATDVLSKSLGSNSAINVVRATFGAVAQLMDARKLARERGKALVDMWG
SIO_010081: TPCCA_RS01020
subclass of: SO_0000673
so part of: TPCCA_RS01020
location: 211128..211646
location: region:211128-211646:1
so has part: feature:211128-211646:1:exon

WP_013944890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211128-211646:1:exon

TPCCA_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpmD
locus tag: TPCCA_RS01025
old locus tag: TPCCA_0206a
so part of: sequence
location: 211649..211834
location: region:211649-211834:1
so has part: feature:211649-211834:1:exon
subclass of: SO_0000010

position:211649:1
position: 211649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211834:1
position: 211834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211649-211834:1:exon

TPCCA_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpmD
locus tag: TPCCA_RS01025
old locus tag: TPCCA_0206a
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881654.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L30
translation: MTKRVRITLVRSTIGQREPVRRTVRSLGLRKLHSMVEKDGSPAVLGMVRAVSHLVRVEELG
SIO_010081: TPCCA_RS01025
subclass of: SO_0000673
so part of: TPCCA_RS01025
location: 211649..211834
location: region:211649-211834:1
so has part: feature:211649-211834:1:exon

WP_010881654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211649-211834:1:exon

TPCCA_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rplO
locus tag: TPCCA_RS01030
old locus tag: TPCCA_0207
so part of: sequence
location: 211834..212295
location: region:211834-212295:1
so has part: feature:211834-212295:1:exon
subclass of: SO_0000010

position:212295:1
position: 212295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211834-212295:1:exon

TPCCA_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rplO
locus tag: TPCCA_RS01030
old locus tag: TPCCA_0207
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881655.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L15
translation: MADFHLIAPKGANRARRIVGRGSSSGRGTTSGRGTKGQQARAGRKAYVGFEGGQMPLYRRVPRRGFSNCAFRKEYAVVNVGALEFVYAPGETVNRQTLIEKGLVKGRVPFIKILADGELTKSIVVRVDRVSARAQEKIQQAGGSVECIEAQER
SIO_010081: TPCCA_RS01030
subclass of: SO_0000673
so part of: TPCCA_RS01030
location: 211834..212295
location: region:211834-212295:1
so has part: feature:211834-212295:1:exon

WP_013944891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211834-212295:1:exon

TPCCA_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: secY
locus tag: TPCCA_RS01035
old locus tag: TPCCA_0208
so part of: sequence
location: 212303..213622
location: region:212303-213622:1
so has part: feature:212303-213622:1:exon
subclass of: SO_0000010

position:212303:1
position: 212303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213622:1
position: 213622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212303-213622:1:exon

TPCCA_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: secY
locus tag: TPCCA_RS01035
old locus tag: TPCCA_0208
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944892.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecY
translation: MKQGVFAAVFRIRELRARIFFTLSVLTVFRFGSVLTVPSVDPRALSAYFRSQVRGNAFADYMDFFVGGAFSNFSVFMLGVMPYISTQILMQLSMIVFPSLKKVVEDVGGRRRVQFWTRVATVFVCLIQSSAVTVYANQIPGAIVIQSYAVHLFVTMLTVTSGSMITLWLGEQITARGIGNGVSMIIFSGIVARLPHALAEMWRLQRLGELNMVFVIVAFVMFVGIIVLVVYEQQGQRKIPIHYARRVVGRKMYGGQSTYIPFKINPSGVIPIIFASSFLTFPLQIASSIGPNVRFLHQLAQFLRPNSWWYNAFYVVLIVFFAYFYTQVTLNSTEIAKQIRENGGTIPGIRADKTEEYLQGILNRLVLPGSLYLAMIAVLPTLIQAAFGFPSSISLLMGGTSLLILVGVDLDTMSQIEAQLKMRQREGLGGRGKVLPRSL
SIO_010081: TPCCA_RS01035
subclass of: SO_0000673
so part of: TPCCA_RS01035
location: 212303..213622
location: region:212303-213622:1
so has part: feature:212303-213622:1:exon

WP_013944892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212303-213622:1:exon

TPCCA_RS05225
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpmJ
locus tag: TPCCA_RS05225
old locus tag: TPCCA_0209
so part of: sequence
location: 213661..213774
location: region:213661-213774:1
so has part: feature:213661-213774:1:exon
subclass of: SO_0000010

position:213661:1
position: 213661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213774:1
position: 213774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213661-213774:1:exon

TPCCA_RS05225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpmJ
locus tag: TPCCA_RS05225
old locus tag: TPCCA_0209
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005487032.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L36
translation: MKVRTSVKVICDKCKLIKRFGIIRVICVNPKHKQRQG
SIO_010081: TPCCA_RS05225
subclass of: SO_0000673
so part of: TPCCA_RS05225
location: 213661..213774
location: region:213661-213774:1
so has part: feature:213661-213774:1:exon

WP_013944893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213661-213774:1:exon

TPCCA_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpsM
locus tag: TPCCA_RS01040
old locus tag: TPCCA_0210
so part of: sequence
location: 213790..214155
location: region:213790-214155:1
so has part: feature:213790-214155:1:exon
subclass of: SO_0000010

position:213790:1
position: 213790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214155:1
position: 214155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213790-214155:1:exon

TPCCA_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpsM
locus tag: TPCCA_RS01040
old locus tag: TPCCA_0210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881658.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S13
translation: MARIAGVDLPNKHVSVALTYIYGISRSSARTICEKARISSACLINDLSQDELAVVRAIIDREYKVEGRLRTEVALNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNARTRKGKRKTVAGKKK
SIO_010081: TPCCA_RS01040
subclass of: SO_0000673
so part of: TPCCA_RS01040
location: 213790..214155
location: region:213790-214155:1
so has part: feature:213790-214155:1:exon

WP_010881658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213790-214155:1:exon

TPCCA_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpsK
locus tag: TPCCA_RS01045
old locus tag: TPCCA_0211
so part of: sequence
location: 214174..214554
location: region:214174-214554:1
so has part: feature:214174-214554:1:exon
subclass of: SO_0000010

position:214174:1
position: 214174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214554:1
position: 214554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214174-214554:1:exon

TPCCA_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpsK
locus tag: TPCCA_RS01045
old locus tag: TPCCA_0211
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002670039.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S11
translation: MAVTKKRKEKKNVYEGNVYIQATFNNTIITVTDLQGNALSWASSGGLGFNGAKKSTPFAAQTVAEAAVQKAQQCGLREVHVFVKGPGIGRESAIRMLGTMGLRVRSIRDITPLPHNGCRPRKTRRI
SIO_010081: TPCCA_RS01045
subclass of: SO_0000673
so part of: TPCCA_RS01045
location: 214174..214554
location: region:214174-214554:1
so has part: feature:214174-214554:1:exon

WP_013944894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214174-214554:1:exon

TPCCA_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpoA
locus tag: TPCCA_RS01050
old locus tag: TPCCA_0212
so part of: sequence
location: 214569..215624
location: region:214569-215624:1
so has part: feature:214569-215624:1:exon
subclass of: SO_0000010

position:214569:1
position: 214569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215624:1
position: 215624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214569-215624:1:exon

TPCCA_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpoA
locus tag: TPCCA_RS01050
old locus tag: TPCCA_0212
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881660.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit alpha
translation: MPRRNLLKGFKRPKVLEFLSENSSECYGKFTASPFETGFGTTIGNCLRRVLLSSIQGYAVTGVRITSFDADGVAHFISSEFEQIPHVREDTLEILNNFKRLRFLLPQGAESSTFTYEFRGAVSLTGKDFAKKFQLEVLSQDLLIMEMMDGAHVEVELHVEFGRGYVPAESHDRYADLVGVIPVDAIFSPVLRVRYDIQSCRVGQRGDYDQLSLEVWTDGTVRPEDAIAEAAKIIKEHFTVFVNFDETALDLEDEPEEDDPAVLELLNMKIADVDFSVRARNCLLTMGIKTLGELTRISEQTLANTRNVGKKSLSEIQGKLQEYNLRLGMADYNHVGVVSRLMRQKEEIDEA
SIO_010081: TPCCA_RS01050
subclass of: SO_0000673
so part of: TPCCA_RS01050
location: 214569..215624
location: region:214569-215624:1
so has part: feature:214569-215624:1:exon

WP_013944895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214569-215624:1:exon

TPCCA_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rplQ
locus tag: TPCCA_RS01055
old locus tag: TPCCA_0213
so part of: sequence
location: 215614..216108
location: region:215614-216108:1
so has part: feature:215614-216108:1:exon
subclass of: SO_0000010

position:215614:1
position: 215614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216108:1
position: 216108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215614-216108:1:exon

TPCCA_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rplQ
locus tag: TPCCA_RS01055
old locus tag: TPCCA_0213
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881661.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L17
translation: MRHRTGFNPLSCMAAHRRALRRNMVTSLFKFERITTTKPKAAEVRRAAERLITRSKSDSVHNRRQVARFIWDKAVLHKLFADIGPRMREREGGYTRILKLGLRQGDAAHVVVLELVDYTFEKSLKKRARTDSVPVRKGAGKKDASRVGGMVPDGQSQKIGKKEE
SIO_010081: TPCCA_RS01055
subclass of: SO_0000673
so part of: TPCCA_RS01055
location: 215614..216108
location: region:215614-216108:1
so has part: feature:215614-216108:1:exon

WP_013944896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215614-216108:1:exon

TPCCA_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01060
old locus tag: TPCCA_0214
so part of: sequence
location: 216132..216329
location: region:216132-216329:1
so has part: feature:216132-216329:1:exon
subclass of: SO_0000010

position:216132:1
position: 216132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216329:1
position: 216329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216132-216329:1:exon

TPCCA_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01060
old locus tag: TPCCA_0214
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881662.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKAHRGKGIRGMVGRGRGVCPVTGQTGVKLLYECEIDGKKVKVSKVGRATLQNRKRRLDAQPGA
SIO_010081: TPCCA_RS01060
subclass of: SO_0000673
so part of: TPCCA_RS01060
location: 216132..216329
location: region:216132-216329:1
so has part: feature:216132-216329:1:exon

WP_010881662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216132-216329:1:exon

TPCCA_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01065
old locus tag: TPCCA_0215
so part of: sequence
location: 216514..217197
location: region:216514-217197:1
so has part: feature:216514-217197:1:exon
subclass of: SO_0000010

position:216514:1
position: 216514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217197:1
position: 217197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216514-217197:1:exon

TPCCA_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01065
old locus tag: TPCCA_0215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505432.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotide exchange factor GrpE
translation: MAKKEKKVCGGDVQGQGVASGCDEALERADSLRASDPVPVESGEGSVPGEHSQELETGASEEALRERVNVLQEQYLRKAADLENYRKRALRERQEAVEHAYAALLADIVAVLDDFDRAIEAADHVSSAEVEASSAFREGVLMIRKQLSSVLETKYGLEYYPVLGERFDPNLHEALSMSPSASVHEKIVGAELQKGYRVRNRILRHAKVMVLTPEEQTEPDRGDGPSE
SIO_010081: TPCCA_RS01065
subclass of: SO_0000673
so part of: TPCCA_RS01065
location: 216514..217197
location: region:216514-217197:1
so has part: feature:216514-217197:1:exon

WP_245522159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216514-217197:1:exon

TPCCA_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: dnaK
locus tag: TPCCA_RS01070
old locus tag: TPCCA_0216
so part of: sequence
location: 217313..219220
location: region:217313-219220:1
so has part: feature:217313-219220:1:exon
subclass of: SO_0000010

position:217313:1
position: 217313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219220:1
position: 219220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217313-219220:1:exon

TPCCA_RS01070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: dnaK
locus tag: TPCCA_RS01070
old locus tag: TPCCA_0216
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881664.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone DnaK
translation: MGKIIGIDLGTTNSCVAIMEGGEPVVIQNAEGGRTTPSIIGFTSDGGRVVGQPAKNQMVTNPEHTIYSIKRFIGSRFNELTGEAKKVPYKIVPQGDDVRVEVEGKLYSTQEISAFILQKMKKTAEDYLGEAVTEAVITVPAYFNDAQRQATKDAGKIAGLDVKRIINEPTAASLAFGFNKDSKREKIIAVYDLGGGTFDISILELGDGVFEVKSTNGDTHLGGDDFDARIVQWLEQGFKSDTGIDLGNDRMALQRLREAAEKAKIALSSSASTEINLPFITADANGPKHLQRTLSRSEFEKMTDDLFERTKEPCRKALKDAGISADRIDEILLVGGSTRMPKVAHVIKDVFGKEGSKGVNPDEAVAIGAAIQGGILGGDVKDVLLLDVTPLSLGIETMGGVFTPLISRNTTIPTRKSQVFSTAADGQTAVSIHVLQGERGMANQNRTLGNFDLVGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKEQHIRIESSSGLSESEIDRMVKEAEANAESDKREREKIEARNVADSLIYQTEKTLKEAGDGVNAADRARIDEAIAELKTVLSGDDVASIKAKTEILQQASYKIAEEMYKRQAAAGAAAGKKSDAPSGNEAEGGDVDYEVVKDEDSK
SIO_010081: TPCCA_RS01070
subclass of: SO_0000673
so part of: TPCCA_RS01070
location: 217313..219220
location: region:217313-219220:1
so has part: feature:217313-219220:1:exon

WP_010881664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217313-219220:1:exon

TPCCA_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: dnaJ
locus tag: TPCCA_RS01075
old locus tag: TPCCA_0217
so part of: sequence
location: 219467..220591
location: region:219467-220591:1
so has part: feature:219467-220591:1:exon
subclass of: SO_0000010

position:219467:1
position: 219467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220591:1
position: 220591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219467-220591:1:exon

TPCCA_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: dnaJ
locus tag: TPCCA_RS01075
old locus tag: TPCCA_0217
EC number: 1.8.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944899.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone DnaJ
translation: MAKKDYYEVLGISKTASGEEIKKAYRRLAIQFHPDRNQGNKEAEERFKEATEAYEVLIDAQKRAAYDRYGFDGLKDMHGAHGFNSSAFQGFEDIFGGGFSDIFENIFGTSSRRGGSGNDGSGGSGRGANLRYDLQISFEEAVYGKKSELHYVRDETCVTCKGAGSASGGRKMCPDCKGTGQIRRSTGFFSIAQSCARCGGEGTIIESPCARCAGSGIERKKQKIIVSIPAGVEEGRRITIPRQGNAGRAGGAYGDLYVFVFVRAHEYFEREGADLYCATSISVTQAILGAQVTVRALDGSAQQVRVPAGTQGGALLRVKGMGVPLARGAGDLYVKVLVRIPTTLSARSRALLAEISQEEGENTHPPLLELSSLK
SIO_010081: TPCCA_RS01075
subclass of: SO_0000673
so part of: TPCCA_RS01075
location: 219467..220591
location: region:219467-220591:1
so has part: feature:219467-220591:1:exon

WP_013944899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219467-220591:1:exon

TPCCA_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01080
old locus tag: TPCCA_0218
so part of: sequence
location: 220768..222237
location: region:220768-222237:1
so has part: feature:220768-222237:1:exon
subclass of: SO_0000010

position:220768:1
position: 220768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222237:1
position: 222237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220768-222237:1:exon

TPCCA_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01080
old locus tag: TPCCA_0218
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944901.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PP2C family protein-serine/threonine phosphatase
translation: MIRRRLAIVKAGSFALLALFFSIFLRFLSPRYSFLGRFISARDMALLISRYEHLPELSSRDRALLVGFVFMIFALALTEIQRYAHGRIRLVVYRQTETRLFEHFITLLRFCYRNEQLVAAFQEVLEYRADCAVLLMDTISNRVIYNSAARFVSDTRTYDLVLHKFSMDYTWHWSDGIYFFDDDLCLMSDRRRARGVYLSSGELRLFIVCRFIRAVEREVISLLFKEFEEYLNRKRNMSTLLLYSHVSQEWAMMARVQRALLPKALPHTKEICVGAFYQPLVNVSGDYYDVISIDEHLFLFVIGDVSGKGLAASLVMGVVLSTIRIVEDKKNLPEILYAVDRAVKRMHLHDKYTTLFLGLIDTAGMNIRYINASMESPLVFTQAGEAHEVYHLHSNCPVIGIVDLPPIQIHERALCPGDVMVMVSDGVVEVVNAQGVELRDADEYLHTLERHVGEHPAQMAQSIAALALNFSADRTTHDDMTIVTVQVKR
SIO_010081: TPCCA_RS01080
subclass of: SO_0000673
so part of: TPCCA_RS01080
location: 220768..222237
location: region:220768-222237:1
so has part: feature:220768-222237:1:exon

WP_013944901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220768-222237:1:exon

TPCCA_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01085
old locus tag: TPCCA_0219
so part of: sequence
location: 222241..224388
location: region:222241-224388:1
so has part: feature:222241-224388:1:exon
subclass of: SO_0000010

position:222241:1
position: 222241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224388:1
position: 224388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222241-224388:1:exon

TPCCA_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01085
old locus tag: TPCCA_0219
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881667.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PP2C family protein-serine/threonine phosphatase
translation: MGLLFFSYLFVAVFVFDVFCLKFYTRRAYALLANIALVSGVASFFLSLSLTAVLYGKMNIQAFLFKIALILFTHASYLFSDMAYQLPYFKKDKRFFLCNTTIHLFGILIIIFGMGPFKWNVLVSFKFYQNYLFSSVSGIVLYAALFFLIIPCVTFATLVKKAFMMKSIAYRQQLLFLAGAVALGFITWVIILFLFAVFPWVFVFFPLGGVFIVLFSQWAFASTGIVSFKEVVFALLRFVLCTVGFSCTAGYISVFWVHRFSTLDMQFVFGFFIVYALFALRDYAFDACSVFFGEIADSGQKLAAELQALDYTAKPAQVLRTFMDTLRMRIACRGLTFLLADEAGVFKTVYSDFEEMATHEMEHQSLQYFFNQDVLMIRKSDPVIDHARQAIRTDILHFFDITHAQMIVLIREAQKLIGCLCFGMKNNGVEYSNHDQHVLEKLYSHFVLVSYYLQNIAKQDVVITVEKELKMSHQIIESIQRKRDFIQDASVEVDSIAYSAHQLGGDFVDFIKLSEKRYLLVIGDVSGKGLAASMSMVILKSVLSTFLRGLCLEETAVFTTFIEKINRFIKDNLPCGTFFAGVFCILDLATHTLYYANCGIPLMSMYIASYKNVVEIQGEGRVLGFVKDVMPFLRVRKVQLGQGDVVVFSTDGMVEVQNLQRERFGNERVGRILQESHGLPVSQITRTIYARLCEFMARDMQDDVTVLAIKCLGPR
SIO_010081: TPCCA_RS01085
subclass of: SO_0000673
so part of: TPCCA_RS01085
location: 222241..224388
location: region:222241-224388:1
so has part: feature:222241-224388:1:exon

WP_013944902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222241-224388:1:exon

TPCCA_RS05605
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05605
old locus tag: TPCCA_0220
so part of: sequence
location: 224581..224748
location: region:224581-224748:1
so has part: feature:224581-224748:1:exon
subclass of: SO_0000010

position:224581:1
position: 224581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224748:1
position: 224748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224581-224748:1:exon

TPCCA_RS05605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05605
old locus tag: TPCCA_0220
inference: COORDINATES: protein motif:HMM:TIGR00377.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: STAS domain-containing protein
translation: MSSSGLGVLISAYDEGLKYQRRLCILNPSESVRRAIELTGFSEMFTVIRSLDELD
SIO_010081: TPCCA_RS05605
subclass of: SO_0000673
so part of: TPCCA_RS05605
location: 224581..224748
location: region:224581-224748:1
so has part: feature:224581-224748:1:exon

WP_245522160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224581-224748:1:exon

TPCCA_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01095
old locus tag: TPCCA_0221
so part of: sequence
location: 224735..225532
location: region:224735-225532:1
so has part: feature:224735-225532:1:exon
subclass of: SO_0000010

position:224735:1
position: 224735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225532:1
position: 225532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224735-225532:1:exon

TPCCA_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01095
old locus tag: TPCCA_0221
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342782.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-alanyl-D-alanine carboxypeptidase family protein
translation: MSWTKWRVGTACAYAGYVLVALGNAVSPQGVDRVDLHRVRAAAKRAALPARLATRLCAQGREFLQELDAVLTTEGYLLRLVDKKHPLPETFVPEHLVPLREQWLFFSKGRSLLLTKVAYEALHQLIQAAAHDGVALSVGSAYRSFAYQKKLFSWYAQEHGMQEAMRFSAREGTSQHQLGTVVDFGSITPAFARSDAGRWTQRNAHRFGWSLSFPPGYEQVTGYVWEPWHFRYVGVRACALQKKWFEDIQQYMLGFIHEWKVNASS
SIO_010081: TPCCA_RS01095
subclass of: SO_0000673
so part of: TPCCA_RS01095
location: 224735..225532
location: region:224735-225532:1
so has part: feature:224735-225532:1:exon

WP_013944904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224735-225532:1:exon

TPCCA_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01100
old locus tag: TPCCA_0222
so part of: sequence
location: 225557..225988
location: region:225557-225988:1
so has part: feature:225557-225988:1:exon
subclass of: SO_0000010

position:225557:1
position: 225557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225988:1
position: 225988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225557-225988:1:exon

TPCCA_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01100
old locus tag: TPCCA_0222
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944905.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGALLWGMVLLRSFVAYADSQAATGGLLKEIMGEVASIRLESNMLKQQLRERHAESAALKKALQTLDVKLEKATKALEESEHALSESKELIETLRSELEILRQRVNALNMRLRRLEITNNVLIGVAVVCGVAAIGAGIYAAVK
SIO_010081: TPCCA_RS01100
subclass of: SO_0000673
so part of: TPCCA_RS01100
location: 225557..225988
location: region:225557-225988:1
so has part: feature:225557-225988:1:exon

WP_245522161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225557-225988:1:exon

TPCCA_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01105
old locus tag: TPCCA_0223
so part of: sequence
location: 226125..227564
location: region:226125-227564:1
so has part: feature:226125-227564:1:exon
subclass of: SO_0000010

position:226125:1
position: 226125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227564:1
position: 227564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226125-227564:1:exon

TPCCA_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01105
old locus tag: TPCCA_0223
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944906.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
translation: MDLSEGARALNAALEGTVVHALLSPLGLRAYFPHGIVAQNAEARMRAPDMNGAVGMVLRHGVPVLRDTLHALVPDLSSSEIVSYAPTAGIPALRERWARRLCARDPVLCPDEPDVAAMQSAAEQGEHSCAAVFPKMSLPIVLPGLTAALSCAMDLFVGAGQTVLVPAPRWENYDLMLAVRCAATPVAFSLFRAGRFDLGACKEALDAQASDGVIRLILNFPHNPSGYTPTEEEAQQLYEVVYAYADAGCAVLVICDDAYSGFEYEASLMRGSFFARFAQAHKNICALKIDGLTKEEYAWGLRVGFLSCAGLALGVSQYQAFEKKVMGVIRASLSCTATLTQTLALRLLAEEDEPAGLGSATARERHQFFQLMCARYREVQRVVRDLTWSTTECGAAVPLRVEFLPCNSGYFTCIRCIGFSAETLRQYLLEQCGIGTVAIDEQHLRVAFSALELPAIERVLRAVVHTAAQLSCVGEGSRS
SIO_010081: TPCCA_RS01105
subclass of: SO_0000673
so part of: TPCCA_RS01105
location: 226125..227564
location: region:226125-227564:1
so has part: feature:226125-227564:1:exon

WP_013944906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226125-227564:1:exon

TPCCA_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01110
old locus tag: TPCCA_0225
so part of: sequence
location: 227754..228494
location: region:227754-228494:1
so has part: feature:227754-228494:1:exon
subclass of: SO_0000010

position:227754:1
position: 227754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228494:1
position: 228494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227754-228494:1:exon

TPCCA_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01110
old locus tag: TPCCA_0225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881673.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: leucine-rich repeat domain-containing protein
translation: MPKQVVVFAMWCIGLGVLVSHPVSAKQNAVSRAEVKETPAKFFQYGLTPGRDGIIITRYLGKGIAVVLPSQIDGLPVVEVATKAFYRCVSLVRVSLPSSVRMIGQHAFDGCTKLARIELPDGLREIRHHAFRKCVSLAGIVFPRSLQVIGQDVFSSCESLVDVVLPNSVKEIGSGAFRDCAELASVRLPVGVKNLADGLFEGCRNLVELGNLPEKVSFGVGVFAGCYRLPDVLKRSVRKLGYEGEF
SIO_010081: TPCCA_RS01110
subclass of: SO_0000673
so part of: TPCCA_RS01110
location: 227754..228494
location: region:227754-228494:1
so has part: feature:227754-228494:1:exon

WP_013944907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227754-228494:1:exon

TPCCA_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01115
old locus tag: TPCCA_r0001
so part of: sequence
location: 228678..230226
location: region:228678-230226:1
so has part: feature:228678-230226:1:exon
subclass of: SO_0000573

position:228678:1
position: 228678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230226:1
position: 230226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228678-230226:1:exon

TPCCA_RS01115
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 545776
locus tag: TPCCA_RS01115
old locus tag: TPCCA_r0001
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TPCCA_RS01115
subclass of: SO_0000673
so part of: TPCCA_RS01115
location: 228678..230226
location: region:228678-230226:1
so has part: feature:228678-230226:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228678-230226:1:exon

TPCCA_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01120
old locus tag: TPCCA_t0012
so part of: sequence
location: 230339..230412
location: region:230339-230412:1
so has part: feature:230339-230412:1:exon
subclass of: SO_0000663

position:230339:1
position: 230339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230412:1
position: 230412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230339-230412:1:exon

TPCCA_RS01120
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS01120
old locus tag: TPCCA_t0012
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:230373..230375,aa:Ile,seq:gat)
SIO_010081: TPCCA_RS01120
subclass of: SO_0000673
so part of: TPCCA_RS01120
location: 230339..230412
location: region:230339-230412:1
so has part: feature:230339-230412:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230339-230412:1:exon

TPCCA_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01125
old locus tag: TPCCA_r0002
so part of: sequence
location: 230522..233474
location: region:230522-233474:1
so has part: feature:230522-233474:1:exon
subclass of: SO_0000573

position:230522:1
position: 230522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233474:1
position: 233474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230522-233474:1:exon

TPCCA_RS01125
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 545776
locus tag: TPCCA_RS01125
old locus tag: TPCCA_r0002
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TPCCA_RS01125
subclass of: SO_0000673
so part of: TPCCA_RS01125
location: 230522..233474
location: region:230522-233474:1
so has part: feature:230522-233474:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230522-233474:1:exon

TPCCA_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rrf
locus tag: TPCCA_RS01130
old locus tag: TPCCA_r0003
so part of: sequence
location: 233523..233633
location: region:233523-233633:1
so has part: feature:233523-233633:1:exon
subclass of: SO_0000573

position:233523:1
position: 233523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233633:1
position: 233633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233523-233633:1:exon

TPCCA_RS01130
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 545776
gene: rrf
locus tag: TPCCA_RS01130
old locus tag: TPCCA_r0003
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TPCCA_RS01130
subclass of: SO_0000673
so part of: TPCCA_RS01130
location: 233523..233633
location: region:233523-233633:1
so has part: feature:233523-233633:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:233523-233633:1:exon

TPCCA_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01135
old locus tag: TPCCA_0226
so part of: sequence
location: complement(233647..234333)
location: region:233647-234333:-1
so has part: feature:233647-234333:-1:exon
subclass of: SO_0000010

position:233647:-1
position: 233647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234333:-1
position: 234333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233647-234333:-1:exon

TPCCA_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01135
old locus tag: TPCCA_0226
inference: COORDINATES: protein motif:HMM:NF014420.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CbiQ family ECF transporter T component
translation: MFFSLYERRQSLLHRAPPVAKVASFALLLLCCNAQSWCMHASLTLVLLALMLIVTRSLKRVAAHIRVVSIYLVFFFSLKILHTFFSTGVVSATQINQHMHAGYHIGIRLFLLLCASSLFYACTSRLELFSLCLRMGKVLHVRSTAYTTPCAVYVMMLVLYFGHDIFREWTELRLVWRARTRANTSLYNWVDATLHFSKTLLTRLLERAQHLSLRRADFKVSDNILSSE
SIO_010081: TPCCA_RS01135
subclass of: SO_0000673
so part of: TPCCA_RS01135
location: complement(233647..234333)
location: region:233647-234333:-1
so has part: feature:233647-234333:-1:exon

WP_013944908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233647-234333:-1:exon

TPCCA_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01140
old locus tag: TPCCA_0227
so part of: sequence
location: complement(234386..235153)
location: region:234386-235153:-1
so has part: feature:234386-235153:-1:exon
subclass of: SO_0000010

position:234386:-1
position: 234386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235153:-1
position: 235153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234386-235153:-1:exon

TPCCA_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01140
old locus tag: TPCCA_0227
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342333.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSADVAADTAVESCAGPLLELVNVSKSFERDCEVLHSVSFRVFPGDCVVLAGANGSGKTVLMNILAGLEPPSSGRVYMARGTTVGLAFQNADTQILGETVFEDCAFGPLQWGYSRAEIDARTNSALAAVSLLDRRDHYARALSGGEKRRLTVAGVLALDAKVVILDEPFANLDYPSVRQVVQLIISLKHAGKTLVIITHEVEKILAAATRLCILSKGVISYDGTPQDALDSRIFSCYGLRDPLHCPRTLSDLLWI
SIO_010081: TPCCA_RS01140
subclass of: SO_0000673
so part of: TPCCA_RS01140
location: complement(234386..235153)
location: region:234386-235153:-1
so has part: feature:234386-235153:-1:exon

WP_013944909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234386-235153:-1:exon

TPCCA_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01145
old locus tag: TPCCA_0228
so part of: sequence
location: complement(235220..236035)
location: region:235220-236035:-1
so has part: feature:235220-236035:-1:exon
subclass of: SO_0000010

position:235220:-1
position: 235220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236035:-1
position: 236035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235220-236035:-1:exon

TPCCA_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01145
old locus tag: TPCCA_0228
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881676.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin transporter BioY
translation: MHRTEPTINCVHDGTRSLHLSIDTTRALPAHSGNEPTRTHLAAVRVSLLKTIPVAPPKILKDSSFRVTPRIGPSEEYCTMHRSKSLAFVALFAALISSSALVSIPLKPVPLVLQNAAAVLTGLLLGPRDGALAVLSFLGAGLLGLPVFSGGRGGYTALFAPTGGFLLGYILAATLAGAIAQHHRLSCTPPRGGGRALLLWIRLTVATLVGFLSIYSIGLPVLGYVLGLRTGELMLGVFLPFFLADTLKIALVVLLAHHLAPTVRRHLYRHG
SIO_010081: TPCCA_RS01145
subclass of: SO_0000673
so part of: TPCCA_RS01145
location: complement(235220..236035)
location: region:235220-236035:-1
so has part: feature:235220-236035:-1:exon

WP_193386055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235220-236035:-1:exon

TPCCA_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01150
old locus tag: TPCCA_0229
so part of: sequence
location: 236000..236812
location: region:236000-236812:1
so has part: feature:236000-236812:1:exon
subclass of: SO_0000010

position:236000:1
position: 236000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236812:1
position: 236812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236000-236812:1:exon

TPCCA_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01150
old locus tag: TPCCA_0229
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944911.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-DNA glycosylase
translation: MYAVYGRLSPMHAGDRESIARFVRVVRDCLDLFRTEGIGPRPRNDSVILPNAACSPRNHAGERAQSTADACVRSSDGSVYTDETLREEIFACRACELYQQRTHAVVGEGIADADVLVVGEAPGAEEDRSGRPFVGQSGKLLDAMLAAIGLSRQQNCYITNVVKCRPPRNRTPTPHETACCARFLHAHLTLHRPCAILALGRCAAQHMLQTTDGIGKLRGRFFTYQGIPLLATYHPSALLRDEALKRPAWEDLKTFRARLLQLKQDAHMPI
SIO_010081: TPCCA_RS01150
subclass of: SO_0000673
so part of: TPCCA_RS01150
location: 236000..236812
location: region:236000-236812:1
so has part: feature:236000-236812:1:exon

WP_013944911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236000-236812:1:exon

TPCCA_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: priA
locus tag: TPCCA_RS01155
old locus tag: TPCCA_0230
so part of: sequence
location: 236817..238790
location: region:236817-238790:1
so has part: feature:236817-238790:1:exon
subclass of: SO_0000010

position:236817:1
position: 236817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238790:1
position: 238790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236817-238790:1:exon

TPCCA_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: priA
locus tag: TPCCA_RS01155
old locus tag: TPCCA_0230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881678.1
GO component: GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO function: GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: primosomal protein N'
translation: MAPWLELVFDVPLDKSFTYRACAAHAGEALVGRRVLAPFGARTLIGFVISESHSSPADCGGAVGTFKEIIRVIDREALFDQTHLACARWMAHFYLCALGQALCAVVPSRKRERTLSSFASCAGVRRTDTYALSGEQRKAIDAITASTGARSFYVHGVTGSGKTEVFLRAAEAVLARGKSVIYLVPEIALTHQVLQEVYVRFGSQAAVLHSALSGSQRLGEWRRIQRMRHCVVIGARSAIFAPLKQLGLVIMDEEHDSSYKSAHVPRYHARQVAMYRCMDANCPFVMGSATPSVEAWYAMLRGAVRRLPLTARVAGGAPPRFEVVDVSKEALLLSTRLVDEIRKTKEAGYQSMLFLNRRGFSYSFQCRSCGYTLCCTQCAVPLTWHKRVGAMQCHYCGRQEAPPESCPCCHSFDTRYGGVGTEYIEEAVQALFPEYRIARVDTDALRSGHVQQTMEQFRAGKIDVLLGTQMIAKGFNFPTLRLVGIACADTGLHTPDFRAAERSFALMMQVAGRAGRYVDNGLVIIQTRNPAHPAVVCAQHGDCESFYAQELAQREALCFPPFVRLIRFVFRSKTQRKAKDAAYAAHALLTAQMPLGADVLGPAACVVAQVAGSYRMQILLRAPSFPVVQQVARSFLDEFRAPAGVYVESDVDPVNVL
SIO_010081: TPCCA_RS01155
subclass of: SO_0000673
so part of: TPCCA_RS01155
location: 236817..238790
location: region:236817-238790:1
so has part: feature:236817-238790:1:exon

WP_013944912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236817-238790:1:exon

TPCCA_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01160
old locus tag: TPCCA_0231
so part of: sequence
location: 238891..239541
location: region:238891-239541:1
so has part: feature:238891-239541:1:exon
subclass of: SO_0000010

position:238891:1
position: 238891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239541:1
position: 239541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238891-239541:1:exon

TPCCA_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01160
old locus tag: TPCCA_0231
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944913.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RluA family pseudouridine synthase
translation: MALPIIFQDAAVVAVDKPAGLAVQPGARVRVCVVDVLQKQLGVRLFPLHRLDKDTAGVLLFAKHARAAALYQGILGSMRVIKRYRALCFGRPPRECGDIRVPIRTGTAARRCQVVRAAHTAYRVLRATDTHTYLELTLHSGRTHQIRIHLAALGCPIIGDDKYGDFARNKACARAWGVKRLQLFAHSLVLPCACKPLVLRARMPVHFLRALDAVAL
SIO_010081: TPCCA_RS01160
subclass of: SO_0000673
so part of: TPCCA_RS01160
location: 238891..239541
location: region:238891-239541:1
so has part: feature:238891-239541:1:exon

WP_013944913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238891-239541:1:exon

TPCCA_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01165
old locus tag: TPCCA_0233
so part of: sequence
location: 239788..240333
location: region:239788-240333:1
so has part: feature:239788-240333:1:exon
subclass of: SO_0000010

position:239788:1
position: 239788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240333:1
position: 240333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239788-240333:1:exon

TPCCA_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01165
old locus tag: TPCCA_0233
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460529.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: STAS domain-containing protein
translation: MGTVVPGFDDEKDESLRMNLQKIDDLGGGVVVFLNGYIDTYNSSFFQKRIAKVIDAGYTRIVFNCASLNYVSSTGIGSFTAFLKTVKPKGGDIVLLDIQPKVYEVFQLLGFSQFFNIRDSIADAVSLFRNKVSPLKVDTFPKVFSCPICSKKLKATKQGRFRCSECKTILALDASAHVSLG
SIO_010081: TPCCA_RS01165
subclass of: SO_0000673
so part of: TPCCA_RS01165
location: 239788..240333
location: region:239788-240333:1
so has part: feature:239788-240333:1:exon

WP_013944914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239788-240333:1:exon

TPCCA_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01170
old locus tag: TPCCA_t0013
so part of: sequence
location: 240468..240540
location: region:240468-240540:1
so has part: feature:240468-240540:1:exon
subclass of: SO_0000663

position:240468:1
position: 240468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240540:1
position: 240540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240468-240540:1:exon

TPCCA_RS01170
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS01170
old locus tag: TPCCA_t0013
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:240501..240503,aa:Thr,seq:ggt)
SIO_010081: TPCCA_RS01170
subclass of: SO_0000673
so part of: TPCCA_RS01170
location: 240468..240540
location: region:240468-240540:1
so has part: feature:240468-240540:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240468-240540:1:exon

TPCCA_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpmG
locus tag: TPCCA_RS01175
old locus tag: TPCCA_0234
so part of: sequence
location: 240569..240739
location: region:240569-240739:1
so has part: feature:240569-240739:1:exon
subclass of: SO_0000010

position:240569:1
position: 240569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240739:1
position: 240739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240569-240739:1:exon

TPCCA_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpmG
locus tag: TPCCA_RS01175
old locus tag: TPCCA_0234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944915.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L33
translation: MAKRTAVELIALQCTECKRRNYTTSKNRRNVQEKLELKKYCPFERRRVLHREAKIK
SIO_010081: TPCCA_RS01175
subclass of: SO_0000673
so part of: TPCCA_RS01175
location: 240569..240739
location: region:240569-240739:1
so has part: feature:240569-240739:1:exon

WP_013944915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240569-240739:1:exon

TPCCA_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01180
old locus tag: TPCCA_t0014
so part of: sequence
location: 240794..240866
location: region:240794-240866:1
so has part: feature:240794-240866:1:exon
subclass of: SO_0000663

position:240794:1
position: 240794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240866:1
position: 240866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240794-240866:1:exon

TPCCA_RS01180
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS01180
old locus tag: TPCCA_t0014
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:240827..240829,aa:Trp,seq:cca)
SIO_010081: TPCCA_RS01180
subclass of: SO_0000673
so part of: TPCCA_RS01180
location: 240794..240866
location: region:240794-240866:1
so has part: feature:240794-240866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240794-240866:1:exon

TPCCA_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: secE
locus tag: TPCCA_RS01185
old locus tag: TPCCA_0235
so part of: sequence
location: 240889..241068
location: region:240889-241068:1
so has part: feature:240889-241068:1:exon
subclass of: SO_0000010

position:240889:1
position: 240889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241068:1
position: 241068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240889-241068:1:exon

TPCCA_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: secE
locus tag: TPCCA_RS01185
old locus tag: TPCCA_0235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881683.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecE
translation: MLKFAKFRRECVAEFRRVVWPARTQVHTAVKVVLVSTVVMALFLGLIDALFVALLSFFF
SIO_010081: TPCCA_RS01185
subclass of: SO_0000673
so part of: TPCCA_RS01185
location: 240889..241068
location: region:240889-241068:1
so has part: feature:240889-241068:1:exon

WP_010881683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240889-241068:1:exon

TPCCA_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: nusG
locus tag: TPCCA_RS01190
old locus tag: TPCCA_0236
so part of: sequence
location: 241078..241635
location: region:241078-241635:1
so has part: feature:241078-241635:1:exon
subclass of: SO_0000010

position:241078:1
position: 241078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241635:1
position: 241635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241078-241635:1:exon

TPCCA_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: nusG
locus tag: TPCCA_RS01190
old locus tag: TPCCA_0236
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014343532.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination/antitermination protein NusG
translation: MAKEWYILHTFSGREARVERAVRMLVEHARIPTNVIFDIKIPEELLTEVKDGKKRVVRRKFFPGYLLVEMDLPEVDWRIVCNEVRRIPGVSGFLGSSGNAKPQAVSADEARRILQKAGEIKGDRTPRIAQTFLVGQQVRIVEGPFATFSGEVEEVMSERNKVRVAVTIFGRATPVELELVQVEAL
SIO_010081: TPCCA_RS01190
subclass of: SO_0000673
so part of: TPCCA_RS01190
location: 241078..241635
location: region:241078-241635:1
so has part: feature:241078-241635:1:exon

WP_010881684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241078-241635:1:exon

TPCCA_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rplK
locus tag: TPCCA_RS01195
old locus tag: TPCCA_0237
so part of: sequence
location: 241742..242182
location: region:241742-242182:1
so has part: feature:241742-242182:1:exon
subclass of: SO_0000010

position:241742:1
position: 241742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242182:1
position: 242182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241742-242182:1:exon

TPCCA_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rplK
locus tag: TPCCA_RS01195
old locus tag: TPCCA_0237
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881685.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L11
translation: MAAKKKVVTQIKLQCPAGKATPAPPVGPALGPHGVSAPQFVQQFNDRTKSMEPGLVVPVVVTVYSDKSFSFVLKTPPAAVLIRKACGIEKGSTNSVKQKVARLSLAQLTEIAQVKLPDMSALTLDAAKRIIAGTARSMGVEVERSL
SIO_010081: TPCCA_RS01195
subclass of: SO_0000673
so part of: TPCCA_RS01195
location: 241742..242182
location: region:241742-242182:1
so has part: feature:241742-242182:1:exon

WP_010881685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241742-242182:1:exon

TPCCA_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rplA
locus tag: TPCCA_RS01200
old locus tag: TPCCA_0238
so part of: sequence
location: 242179..242859
location: region:242179-242859:1
so has part: feature:242179-242859:1:exon
subclass of: SO_0000010

position:242179:1
position: 242179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242859:1
position: 242859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242179-242859:1:exon

TPCCA_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rplA
locus tag: TPCCA_RS01200
old locus tag: TPCCA_0238
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881686.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L1
translation: MKRGKKYRAAVARYDRAERFSLDRAVGLLKEVRYASFDETVEVHVSLRLKKNQTVRDTVVLPHRFRAEVRVLVFCKEDRVSEALAAGAAYAGDAEYLEKVKGGWFDFDVVVASPDMMKDVGRLGMVLGRRGLMPNPRTGTVSADLGAAVCELKKGRVEFRADKTGVVHLAVGKTTMDSAQIVENVDVFLSEMDRKKPVDVKAGFVRSISLSSSMGPGIWVVHKSEE
SIO_010081: TPCCA_RS01200
subclass of: SO_0000673
so part of: TPCCA_RS01200
location: 242179..242859
location: region:242179-242859:1
so has part: feature:242179-242859:1:exon

WP_013944916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242179-242859:1:exon

TPCCA_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rplJ
locus tag: TPCCA_RS01205
old locus tag: TPCCA_0239
so part of: sequence
location: 242861..243403
location: region:242861-243403:1
so has part: feature:242861-243403:1:exon
subclass of: SO_0000010

position:242861:1
position: 242861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243403:1
position: 243403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242861-243403:1:exon

TPCCA_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rplJ
locus tag: TPCCA_RS01205
old locus tag: TPCCA_0239
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944917.1
GO component: GO:0015934 - large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L10
translation: MAVRARRLQPAKVAAVESLTRDLGEASSYIFTEYRGLTVEQLTALRRALREFSCVYRVVRNNFANIAFTSLNMTVGEYLVGPTAIALVDTEHANGVARVLFDFAKEVPALVVKGAILDGEVFDASKVEAYSKLPGKKELISMFLSALNATTVKFVRVLQAVMDKRDEGVEVSVVSGGDSS
SIO_010081: TPCCA_RS01205
subclass of: SO_0000673
so part of: TPCCA_RS01205
location: 242861..243403
location: region:242861-243403:1
so has part: feature:242861-243403:1:exon

WP_013944917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242861-243403:1:exon

TPCCA_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rplL
locus tag: TPCCA_RS01210
old locus tag: TPCCA_0240
so part of: sequence
location: 243512..243901
location: region:243512-243901:1
so has part: feature:243512-243901:1:exon
subclass of: SO_0000010

position:243512:1
position: 243512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243901:1
position: 243901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243512-243901:1:exon

TPCCA_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rplL
locus tag: TPCCA_RS01210
old locus tag: TPCCA_0240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881688.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L7/L12
translation: MAALSNEQIIEAIRGKTILELSELIKAVEEEFGVTAAVPVAPVAEGGGAGSVAAEEQTEFAVVLKGLAEPGKKIAVIKEVRNVISGLGLKEAKDLVEGAPKTLKENVSKEEAAKIKESMTAAGALIEIS
SIO_010081: TPCCA_RS01210
subclass of: SO_0000673
so part of: TPCCA_RS01210
location: 243512..243901
location: region:243512-243901:1
so has part: feature:243512-243901:1:exon

WP_013944918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243512-243901:1:exon

TPCCA_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpoB
locus tag: TPCCA_RS01215
old locus tag: TPCCA_0241
so part of: sequence
location: 244165..247701
location: region:244165-247701:1
so has part: feature:244165-247701:1:exon
subclass of: SO_0000010

position:244165:1
position: 244165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247701:1
position: 247701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244165-247701:1:exon

TPCCA_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpoB
locus tag: TPCCA_RS01215
old locus tag: TPCCA_0241
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944920.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta
translation: MSARVCKTHRVYVGKDVRNFMDIPDLIEIQLRSYDTFLHGARNAPSGADTLISGTTEELGLEDVFKTTFPIESSTGDMTLEYQSYSLDEKNIKFSEAECKQKGLTYAIPLKALVDLRFNNTGEIRRKDIYMGDIPKMTERGTFIINGAERVVVSQIHRSPGVVFSHEKDKEGREVFSSRIIPYRGSWLEFEIDQKKDLIYAKLDKKRRILGTVFLRALHYETREQIIEAFYAIEKTPVCQDRAEYELLTGKILARSVTVENEQGETRVLYKAGEKIHPHVIDDLLQNGICEVYVINLEAEGSLRSAVVINCLEREEMKFSKSGAQDELSREEALCIVYSALRPSDPMTMDAAEKDLQTMFFSPRRYDLGRVGRYKLNKKFRSDSPTTECTLTLDDIVNTMKFLIRMYSGDAQEDDIDHLGNRRIRSVGELMTNTLKTAFLRMERIAKERMSSKETETIKPQDLISIKPIMAAIKEFFGASQLSQFMDQVNPLAELTHKRRLNALGPGGLSRERAGFEVRDVHYTHYGRMCPIETPEGPNIGLIVSMANYARVNGYGFLEVPYVRVRDGVVTKEIEYLDAMDEDRYYIGQDSTAVGPDGVIRVDHVSCRHRGDYSTRSPKDIQYMDVSPKQIISVSASLIPFLEHDDANRALMGSNMQRQGVPLIFPEPPRVGTGMEEKCAYDSGVLVKAKQDGTVAYVSSEKIVVCSAAASGEEQKIVYPLLKYQRTNQDTCYHQRPIVHVGDRVQVGDALADGPATYRGELALGRNILVGFVPWNGYNYEDAILISHRVVKEDMFTSVHIKEFSTEVRETKLGSERMTNDIPNKSEKNLDNLDAEGIIRIGSKVRAGDVLIGKITPKSESETTPEFRLLNSIFGEKAKEVRDSSLRVPHGVEGTVIDVQRLRRSEGDDLNPGVSEVVKVLIATKRKLREGDKMAGRHGNKGIVARILPEEDMPYLDDGTPLDVCLNPLGVPSRMNIGQILESELGLAGLRLDEWYESPVFQSPSNEQIGEKLMQAGFPTNSKVMLRDGRTGDYFQNPVFVGVIYFMKLAHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAANTLQELLTIKSDDMHGRSKIYEAIVKGEASSPTGIPESFNVLVQELRGLALDFTIYDAKGKQIPLTERDEEMTNKIGSKF
SIO_010081: TPCCA_RS01215
subclass of: SO_0000673
so part of: TPCCA_RS01215
location: 244165..247701
location: region:244165-247701:1
so has part: feature:244165-247701:1:exon

WP_013944920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244165-247701:1:exon

TPCCA_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpoC
locus tag: TPCCA_RS01220
old locus tag: TPCCA_0242
so part of: sequence
location: 247714..251964
location: region:247714-251964:1
so has part: feature:247714-251964:1:exon
subclass of: SO_0000010

position:247714:1
position: 247714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251964:1
position: 251964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247714-251964:1:exon

TPCCA_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpoC
locus tag: TPCCA_RS01220
old locus tag: TPCCA_0242
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014343533.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta'
translation: MKDIRDFDSLQIKLASPDTIRAWSYGEVKKPETINYRTLRPEREGLFCERIFGTTKEWECFCGKFKSIRYRGVICDRCGVEVTHFKVRRERMGHIELATPVSHIWYYRCVPSRMGLLLDLQVIALRSVLYYEKYIVIEPGDTDLKKNQLLTETEYNDAQERYGGGFTAGMGAEAIRTLLQNLDLDALVAQLREKMMEKGAKSDKRLLRRIEIVENFRVSGNKPEWMILSVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVIHRNSRLIRLMELKAPDIIIRNEKRMLQEAVDALFDNSKRKPAIKGASNRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLWQCGLPTKMALELFKPFIMKKLVEKEIVSNIKKAKMLVEQESPKVFSVLDEVVKEHPVMLNRAPTLHRLGIQAFEPVLVEGKAIRLHPLVCKPFNADFDGDQMAVHVPLTQAAQMECWTLMLSNRNLLDPANGRTIVYPSQDMVLGLYYLTKERSLPEGARPRRFSSVEEVMMAAEKGVIGWQDQIQVRYHKCDGQLVVTTAGRLVLNEEVPAEIPFVNETLDDKRIRKLIERVFKRQDSWLAVQMLDALKTIGYTYATFFGATLSMDDIIVPEQKVQMLEKANKEVLAIASQYRGGHITQEERYNRVVEVWSKTSEELTSLMMETLERDKDGFNTIYMMATSGARGSRNQIRQLAGMRGLMAKPSGDIIELPIRSNFKEGLNVIEFFISTNGARKGLADTALKTADAGYLTRRLVDIAQDVVVNEEDCGTINGIEYRAVKSGDEIIESLAERIVGKYTLERVEHPITHELLLDVNEYIDDERAEKVEEAGVESVKLRTVLTCESKRGVCVCCYGRNLARNKIVEIGEAVGIVAAQSIGQPGTQLTMRTFHVGGTASSTTEENRITFKYPILVKSIEGVHVKMEDGSQLFTRRGTLFFHKTLAEYQLQEGDSVQVRDRARVLKDEVLYHTTDGQTVYASVSGFARIIDRTVYLVGPEQKTEIRNGSNVVIKADEYVPPGKTVATFDPFTEPILAEQDGFVRYEDIILGSTLIEEVNTETGMVERRITTLKTGIQLQPRVFISDESGNALGSYYLPEEARLMVEEGAQVKAGTVIVKLAKAIQKTSDITGGLPRVSELFEARRPKNAAVLAQISGVVSFKGLFKGKRIVVVRDHYGKEYKHLVSMSRQLLVRDGDTVEAGERLCDGCFDPHDILAILGENALQNYLMNEIRDVYRVQGVSINDQHIGLVVRQMLRKTEVVSVGDTRFIYGQQVDKYRFHEENRRVEAEGGQPAVARPMFQGITKAALNIDSFISAASFQETNKVLTNAAIAGSVDDLCGLKENVIIGHLIPAGTGMRRYRQVKLFDKNKRDLDVQMEEVIRRRKLEEEALAQAVAGMEGEPEGEA
SIO_010081: TPCCA_RS01220
subclass of: SO_0000673
so part of: TPCCA_RS01220
location: 247714..251964
location: region:247714-251964:1
so has part: feature:247714-251964:1:exon

WP_010881690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247714-251964:1:exon

TPCCA_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpsL
locus tag: TPCCA_RS01225
old locus tag: TPCCA_0243
so part of: sequence
location: 252067..252441
location: region:252067-252441:1
so has part: feature:252067-252441:1:exon
subclass of: SO_0000010

position:252067:1
position: 252067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252441:1
position: 252441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252067-252441:1:exon

TPCCA_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpsL
locus tag: TPCCA_RS01225
old locus tag: TPCCA_0243
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012538144.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S12
translation: MPTINQLTRIGRKAVFSRTKSPALQACPQKRGVCTRVMTVTPKKPNSALRKVARVRLSSGVEVTAYIPGIGHNLQEHSIVLIRGGRVKDLPGVRYHIIRGAKDTLGVVDRKRGRSKYGAKRPRA
SIO_010081: TPCCA_RS01225
subclass of: SO_0000673
so part of: TPCCA_RS01225
location: 252067..252441
location: region:252067-252441:1
so has part: feature:252067-252441:1:exon

WP_010881691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252067-252441:1:exon

TPCCA_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpsG
locus tag: TPCCA_RS01230
old locus tag: TPCCA_0244
so part of: sequence
location: 252463..252933
location: region:252463-252933:1
so has part: feature:252463-252933:1:exon
subclass of: SO_0000010

position:252463:1
position: 252463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252933:1
position: 252933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252463-252933:1:exon

TPCCA_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpsG
locus tag: TPCCA_RS01230
old locus tag: TPCCA_0244
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002670537.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S7
translation: MGRKRRVSRRVPPPDARYNSVVLAKFICRMMLAGKKATAVGIMYDCLERIQQKTGEEPLPVFTKALENVKPAVEVKSRRVGGSTYQVPMEIRETRREALGMRWIIGAARRRSGRGMSERLAAEILDAYHSTGTAFKRKEDTHRMAEANKAFSHYRW
SIO_010081: TPCCA_RS01230
subclass of: SO_0000673
so part of: TPCCA_RS01230
location: 252463..252933
location: region:252463-252933:1
so has part: feature:252463-252933:1:exon

WP_013944921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252463-252933:1:exon

TPCCA_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01235
old locus tag: TPCCA_0245
so part of: sequence
location: 253067..256390
location: region:253067-256390:1
so has part: feature:253067-256390:1:exon
subclass of: SO_0000010

position:253067:1
position: 253067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256390:1
position: 256390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253067-256390:1:exon

TPCCA_RS01235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01235
old locus tag: TPCCA_0245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505436.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGGLLSDPHNFARACALFREFSAKEERSGVVRAELKCPVDVRDSFLRASREIDPRAAHGLQQEEVLGDGRAALCSADCLLLQAFTHFHNTELARYRARLADIDARIVYERFLRDWECAVACAHFGIHRRSTVFTRVHSDAIRNLEEQRAALALETPESFFVLHAAQWLGEVERVSSGVLAQTPSVSAALERIATSLARGDAVLLRGHLGTGKTELAVLAAERFALHKLITEDVRCALNEWCTAATGGSCAEIRGSERGVSDALQSSQEARTQFQRLFSQRAAYYEQALRLGDEQLLQRIKPLFISGSKHIDTEDLFLEKTLVLKNSLEGKTPEHCYQDVHAFTERGYAFDPMLDIYLAKYGNFGTEVQKIEREVLRAVKEGRPLVIDEINAIPMQHLIALNDILQKRVGDFAYIPGVGPVKIAAGFGVIATGNISSGLVHYEGTGALNPAFASRFNTFEYDYPPQSTEGLYTNQAHPEKNELFRIILARLASSGGSLCLPDIDGSLDKLFKLAQLAKVTQQVFSGKWKDSTGGSETHDGLGDVEPELREAVLSIRNVIRVLDEWNRGEEKDVDQALWDGFIGGVLNADDQNYILSQAVRFGFFQEKDGWSVRPKGIGAGFTSYEEIRTRPYEYTRLPDGVKTLAEVVALLFGHGPAYAMHTQNAVPDVVDAGAMLVLHDRIHELVRVCAAFRLLQEKSYARECADRIAHLQCSCDQLVSEHARLRSEGGTPRALWDDLARAEQTSDALIQELLPEFRHCFPDICGDECTYSDVFFEFGKSITAAIPLAEDSVLIAGGTDDIRLLYRVHDQWLVAESTHKSVKTDWRICALISMGDGEVVVVTEGGETIVLSIQERSKKAKRRRVSFEVVARVEGVYERVLCVEKVNAHRVVVGDETGALFILEKGVHGYEYRGPILGLGGGIRVVRALNTAQLVVFSGFSGTRLLHNEEYSDAIYGFENPYTEAVVLSEDRVVVFGDDGESRVLRHEHGMAAGDYAYGEWITGFKSVVLCALALSSRMVLVFGRGGEARLLSFDATGTAQYSRSFGNTTGAVISAFLLRSEHLSVFNVFIAAENGTCRLLTVHEFCEPSMFKERLSKIIAPPLHDNE
SIO_010081: TPCCA_RS01235
subclass of: SO_0000673
so part of: TPCCA_RS01235
location: 253067..256390
location: region:253067-256390:1
so has part: feature:253067-256390:1:exon

WP_245522162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253067-256390:1:exon

TPCCA_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01240
old locus tag: TPCCA_0246
so part of: sequence
location: 256536..258329
location: region:256536-258329:1
so has part: feature:256536-258329:1:exon
subclass of: SO_0000010

position:256536:1
position: 256536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258329:1
position: 258329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256536-258329:1:exon

TPCCA_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01240
old locus tag: TPCCA_0246
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881694.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VWA domain-containing protein
translation: MVGVPLQWFLKDDFDGKEILWNLFRELVYYRELKADYAYYCNRVSFFEDAAQGMRRLMYEAVFSREARDEIRVRAFVQHYCHTEVASLFYLFDAVYAFHYVRNRAPYYTTPEGSALLASLYQKERGVYWEHTETALHLQFAYALAERVLFHDMPKGCNRACIARDPVVQEVLRTLVLGTEMSNFIHSEFFPLSGEVVPTKHRDRIVSVFLLEHFVRLWHLSVANITFELKNITDRSYDPFRNERAFEYTKSNLHAVHSRDGQQELKKREDVFESCTTQFDERFSISPKERKEFARLLRTTHRLRIDMRAFWKSLIGKSVQWIDCYEGKCPKGRLNVGDFVSVFPDFQEFRGRDQRYKLRVYDRVYEVRACTLRPAQIEVSFVVDNSGSMNKEKIASAREALAVSMLSLKDFGEYSDMLAAGRRERTTIHSEVYYFGSSFIKVKSFGKSKSKDFNSAQLIKASVNLDGRFGGTNDAEVLKHILADVERRRARVSSDTSFVKVVLVITDGCSSYPHESRRTIEELRRRGVMIFGFQIGLMSPEETALFHDVWNSTEELGLLLGERLEYLPRELLRTLRVVLSKVHRLSSGERLHAQRVW
SIO_010081: TPCCA_RS01240
subclass of: SO_0000673
so part of: TPCCA_RS01240
location: 256536..258329
location: region:256536-258329:1
so has part: feature:256536-258329:1:exon

WP_193386059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256536-258329:1:exon

TPCCA_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01245
old locus tag: TPCCA_0247
so part of: sequence
location: 258422..259453
location: region:258422-259453:1
so has part: feature:258422-259453:1:exon
subclass of: SO_0000010

position:258422:1
position: 258422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259453:1
position: 259453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258422-259453:1:exon

TPCCA_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01245
old locus tag: TPCCA_0247
EC number: 3.5.1.28
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505437.1
GO function: GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO process: GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetylmuramoyl-L-alanine amidase
translation: MKFLRSCLIGGVFFFALCLSADEAFVSAMKLARTLNVSVSWNPLSQTILFSKGERRVQCRVGQVLALLDGSEVLMIEPPVVKDAVVYVSGGFAERLRKVFGYSSHQPEHRVGAVLIDPGHGGKDWGTKGSYREQGKTVVVKEKDIALRASQNIYDLLTARYPDRKIIMTRKGDSYLTLEERVAMANGVKLGKYEAILYVSVHANFSWNTKASGFEVWYLPPEYRRSILDKNAASKEVLPILNSMLEEEFTMESIMIARSIADGMQASVGAQSKNRGVKEEAWFVVRNAKMPSVLVELGFVSNPVEARLLNDADYLKRCAQGIYNGLVSFITYFEGSGGFTGPL
SIO_010081: TPCCA_RS01245
subclass of: SO_0000673
so part of: TPCCA_RS01245
location: 258422..259453
location: region:258422-259453:1
so has part: feature:258422-259453:1:exon

WP_245522163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258422-259453:1:exon

TPCCA_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01250
old locus tag: TPCCA_0248
so part of: sequence
location: 259450..259923
location: region:259450-259923:1
so has part: feature:259450-259923:1:exon
subclass of: SO_0000010

position:259450:1
position: 259450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259923:1
position: 259923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259450-259923:1:exon

TPCCA_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01250
old locus tag: TPCCA_0248
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342783.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GerMN domain-containing protein
translation: MIGDGAALYGVVRAVCWTLLLMIGVALAAQQLAGERCIRYVLFFERMRDGAVVCEPRYVRGHTQGGAVREVVRELLLGPQHHGYARLVDPTVRPLSCFSRGDTLYIDLPVGVLSPKYQTCSLHRAYELFERSVVLNCAPVKRVCFYVGGRAGFESDG
SIO_010081: TPCCA_RS01250
subclass of: SO_0000673
so part of: TPCCA_RS01250
location: 259450..259923
location: region:259450-259923:1
so has part: feature:259450-259923:1:exon

WP_013944925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259450-259923:1:exon

TPCCA_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01255
old locus tag: TPCCA_0249
so part of: sequence
location: 260002..261054
location: region:260002-261054:1
so has part: feature:260002-261054:1:exon
subclass of: SO_0000010

position:260002:1
position: 260002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261054:1
position: 261054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260002-261054:1:exon

TPCCA_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01255
old locus tag: TPCCA_0249
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881697.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar filament outer layer protein FlaA
translation: MKKAVVLSAVALLSGVCAVADESVLIDFAKLNADIMADKSGGMTHNRRTVLDYASLAGASYTDEQKALMRSSLAVAQWEVVLNSSARNPVAHAASRVIEAPVSEGAKSFAGERVLGVRVLFPTWDSNANAMIKPAFVIPAYEVMAQVDDQGNVQAPTEEEKASGKGRFEDGYGVVKNVGVLKSIAVNTYGMNYPHGLYVMMRDQGGEVHRYFMGYLLFDSWKELVWNNPSYISDVRSREVRLYPVYPTSTPHVVFEGFVVTRDAAHAGGDYVGYFKDVKIIYDKAVLSTVRDFADEDLWGIQAQREAERKRVEVARFGQQQVLRYIEQEKLATEVGFTPSGGAQRQEGQQ
SIO_010081: TPCCA_RS01255
subclass of: SO_0000673
so part of: TPCCA_RS01255
location: 260002..261054
location: region:260002-261054:1
so has part: feature:260002-261054:1:exon

WP_013944926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260002-261054:1:exon

TPCCA_RS05610
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05610
so part of: sequence
location: 261105..261332
location: region:261105-261332:1
so has part: feature:261105-261332:1:exon
subclass of: SO_0000010

position:261105:1
position: 261105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261332:1
position: 261332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261105-261332:1:exon

TPCCA_RS05610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881698.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFPSLLFLGFSGVLAFGEVGWVGVYPPGRGMIRVRCVGCVVGWLGLRRVLVRGGIWLLLHPGIGRVLCFYLGAW
SIO_010081: TPCCA_RS05610
subclass of: SO_0000673
so part of: TPCCA_RS05610
location: 261105..261332
location: region:261105-261332:1
so has part: feature:261105-261332:1:exon

WP_245522164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261105-261332:1:exon

TPCCA_RS05230
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpsT
locus tag: TPCCA_RS05230
pseudo: true
so part of: sequence
location: <261227..261454
location: region:261227-261454:1
so has part: feature:261227-261454:1:exon
subclass of: SO_0000010

position:261227:1
position: 261227
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:261454:1
position: 261454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261227-261454:1:exon

TPCCA_RS05230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpsT
locus tag: TPCCA_RS05230
inference: COORDINATES: protein motif:HMM:TIGR00029.2
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 30S ribosomal protein S20
SIO_010081: TPCCA_RS05230
subclass of: SO_0000673
so part of: TPCCA_RS05230
location: <261227..261454
location: region:261227-261454:1
so has part: feature:261227-261454:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:261227-261454:1:exon

TPCCA_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01260
so part of: sequence
location: 261486..261803
location: region:261486-261803:1
so has part: feature:261486-261803:1:exon
subclass of: SO_0000010

position:261486:1
position: 261486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261803:1
position: 261803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261486-261803:1:exon

TPCCA_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881700.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MKRVRRTRSFVVDALCDEVDLSRRHVARIVDNFVSVVTAALERGETVELRDFGVFESRVRKASVGRSIKTGEVVSIPSHCVVVFRPSKRLRSAVRGCRSGEVGAD
SIO_010081: TPCCA_RS01260
subclass of: SO_0000673
so part of: TPCCA_RS01260
location: 261486..261803
location: region:261486-261803:1
so has part: feature:261486-261803:1:exon

WP_041610027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261486-261803:1:exon

TPCCA_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: lnt
locus tag: TPCCA_RS01265
old locus tag: TPCCA_0252
so part of: sequence
location: 261793..263433
location: region:261793-263433:1
so has part: feature:261793-263433:1:exon
subclass of: SO_0000010

position:261793:1
position: 261793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263433:1
position: 263433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261793-263433:1:exon

TPCCA_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: lnt
locus tag: TPCCA_RS01265
old locus tag: TPCCA_0252
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944927.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO process: GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: apolipoprotein N-acyltransferase
translation: MRIEEWCRSRLGEFLLFVLAVSLFALSHPNPLLPRGCALLAYGALAPLFLLVRWASGFAVVFWGGAYGAFSYGAFSYWLFVFHPVALCVVAGFSALFLAALCLALKAGGAFWQRRALLVQCLVWLGYEYAKTLGFLGFPYGVMGYSQWRVLPLIQVASVFGVWAVSALVVFPSAWLASVLGQWVEESERDARAFLSAAYSHWVSALVWVGLCGFCVCAAKAGWWPDCTAHTRAKVALVQPNSDPRRGGIESYRADFSTLTYLSDWALERYPDVDLVVWPETAFVPRIDWHYRYRHEQQSFQLVCDLLDYVNAKNCPFVIGSDDAYKRRTKEGDWERVDYNAALLFIPGVNVLPPSPQRYHKIKLVPFTEYFPYKRVFPWFYNFLEKQDARFWAQGSEFVVFEARGLKFSVPICFEDAFGYITREFCARGASLLVNISNDSWAKSLSCQYQHLSMAVFRAIENRRALVRASTSGQTVAIAPDGRILDELQPFAPGVLVADVPIVTCACGGYRYWGDALGVFFCVASLFILIAGGARHMLRCRRGGWR
SIO_010081: TPCCA_RS01265
subclass of: SO_0000673
so part of: TPCCA_RS01265
location: 261793..263433
location: region:261793-263433:1
so has part: feature:261793-263433:1:exon

WP_013944927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261793-263433:1:exon

TPCCA_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01270
old locus tag: TPCCA_0253
so part of: sequence
location: 263424..263837
location: region:263424-263837:1
so has part: feature:263424-263837:1:exon
subclass of: SO_0000010

position:263424:1
position: 263424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263837:1
position: 263837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263424-263837:1:exon

TPCCA_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01270
old locus tag: TPCCA_0253
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881702.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polymer-forming cytoskeletal protein
translation: MALKRVSEGHGKTVLGAKTVFDGVLRFKGNLHIRGKFSGAIDAQGCLTIAPGAVCAVQYARAVSIFVEGEVRGNLTVVDRVEMRDGSRVFGDVTASRIKICDGVTFEGSVCMTREGNVSKRDLFSVQSEQLKEHLRR
SIO_010081: TPCCA_RS01270
subclass of: SO_0000673
so part of: TPCCA_RS01270
location: 263424..263837
location: region:263424-263837:1
so has part: feature:263424-263837:1:exon

WP_010881702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263424-263837:1:exon

TPCCA_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rho
locus tag: TPCCA_RS01275
old locus tag: TPCCA_0254
so part of: sequence
location: 264074..265633
location: region:264074-265633:1
so has part: feature:264074-265633:1:exon
subclass of: SO_0000010

position:264074:1
position: 264074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265633:1
position: 265633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264074-265633:1:exon

TPCCA_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rho
locus tag: TPCCA_RS01275
old locus tag: TPCCA_0254
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881703.1
GO function: GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor Rho
translation: MKDSVGTVVGQGELGLEEGIVGNQIVSEDSAADVGECDAYGGRKKLVIRSRSRRRVVTSKALEVEKRPRRALRFKQNFCPEDAETSESSADIKGRARLLIDDLTEMGMHALRDFAVQRGISQEDVVVMKKSDIVFHILKNHTENGGVIFASGSLEILPDGYGFLRSPQNSYLPGSDDIYVSPSQIRLFNLKTGDTIYGQIRSPKEGERFFAMLRVETVNFEEVAKVQDRVPFDSLTPLYPREKLNLETRTEDISTRVMNLFCPIGKGQRALIVAPPRTGKTILMQKIANAITQNHPEVYLIVLLIDERPEEVTDMERTVDAEVISSTFDEQATRHVQIAEIVLERAKRLVEHRKDVVILLDSITRLARAYNQTMPTSGKVLSGGVDSNALHKPKRFFGAARNVEEGGSLTIIATALIETGSRMDEVIFEEFKGTGNMEINLDRRLSDRRLFPAVSIKKSGTRKEELLLTEEEMQRIWVLRKVINPMDDAEIVELLIDKMRKTKNNEAFLRSMNTGAFSS
SIO_010081: TPCCA_RS01275
subclass of: SO_0000673
so part of: TPCCA_RS01275
location: 264074..265633
location: region:264074-265633:1
so has part: feature:264074-265633:1:exon

WP_013944929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264074-265633:1:exon

TPCCA_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpmE
locus tag: TPCCA_RS01280
old locus tag: TPCCA_0255
so part of: sequence
location: 265752..265955
location: region:265752-265955:1
so has part: feature:265752-265955:1:exon
subclass of: SO_0000010

position:265752:1
position: 265752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265955:1
position: 265955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265752-265955:1:exon

TPCCA_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpmE
locus tag: TPCCA_RS01280
old locus tag: TPCCA_0255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881704.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L31
translation: MKKGLHPRYEETKVVCACGNVIVTASTVKDLRVEICSACHPFFTGKQKLVDSAGRIDRFNRRYKIRG
SIO_010081: TPCCA_RS01280
subclass of: SO_0000673
so part of: TPCCA_RS01280
location: 265752..265955
location: region:265752-265955:1
so has part: feature:265752-265955:1:exon

WP_010881704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265752-265955:1:exon

TPCCA_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: pgsA
locus tag: TPCCA_RS01285
old locus tag: TPCCA_0256
so part of: sequence
location: 266000..266650
location: region:266000-266650:1
so has part: feature:266000-266650:1:exon
subclass of: SO_0000010

position:266000:1
position: 266000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266650:1
position: 266650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266000-266650:1:exon

TPCCA_RS01285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: pgsA
locus tag: TPCCA_RS01285
old locus tag: TPCCA_0256
EC number: 2.7.8.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881705.1
GO function: GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO process: GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
translation: MRLSDFYTALRLALVLPFFALYHMPRWVVMYFPAANVGRVVSIASVLLFLFIACTDFLDGYYARKSGKYSSFGKVFDPFADVIANVAVMLCLVADNFMPVFLFLCILYREFGMMFLRMLACGEGHVVGAQRMGKLKTASYMGAILFSLLLKALYAFELAGADWYERMRAVGRLVYVVPVVLALASFFSYLKTFFPILKRVCGRTRYPVCKTCREWD
SIO_010081: TPCCA_RS01285
subclass of: SO_0000673
so part of: TPCCA_RS01285
location: 266000..266650
location: region:266000-266650:1
so has part: feature:266000-266650:1:exon

WP_013944930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266000-266650:1:exon

TPCCA_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: glpQ
locus tag: TPCCA_RS01290
old locus tag: TPCCA_0257
so part of: sequence
location: 266765..267817
location: region:266765-267817:1
so has part: feature:266765-267817:1:exon
subclass of: SO_0000010

position:266765:1
position: 266765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267817:1
position: 267817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266765-267817:1:exon

TPCCA_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: glpQ
locus tag: TPCCA_RS01290
old locus tag: TPCCA_0257
EC number: 3.1.4.46
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944931.1
GO function: GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO process: GO:0006629 - lipid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerophosphodiester phosphodiesterase
translation: MTLWGGVFAALVAGCASERMIVAYRGAAGYVPEHTFASKVLAFAQGADYLQQDVVLSKDNQLIVAQSHILDNMTDVAEKFPHRQRADGHFYVIDFTVEELSLLRATNSFYTRGKRHTPVYGQRFPLWKPGFRLHTFEEELQFIRGLEQTTGKKIGIYSEIKVPWFHHQEGKDIAALTLALLKKYGYQSRSDLVYVQTYDFNELKRIKRELLPKYEMNVKLIQRVAYTDQRETQEKDSRGKWINYNYNWMFEPGGMQKIAKYADGVGPDWRMLIENEWSKVGAVRLSPMVSAIQDAKLECHVHTVRKETLPSYARTMDEMFSILFKQTGANVVLTDFPDLGVKFLGKPARY
SIO_010081: TPCCA_RS01290
subclass of: SO_0000673
so part of: TPCCA_RS01290
location: 266765..267817
location: region:266765-267817:1
so has part: feature:266765-267817:1:exon

WP_245522165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266765-267817:1:exon

TPCCA_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01295
old locus tag: TPCCA_0258
so part of: sequence
location: complement(267884..268594)
location: region:267884-268594:-1
so has part: feature:267884-268594:-1:exon
subclass of: SO_0000010

position:267884:-1
position: 267884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268594:-1
position: 268594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267884-268594:-1:exon

TPCCA_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01295
old locus tag: TPCCA_0258
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881707.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSLGPFHRKGWHCNSLRIRTQSTETVTHVGARSFRSAVFTLLTTVCALCGDPAHAYLVQFKEQFYRLYHTHLHQYPDEVIENIHWLERAVHADFANPLYALAPIRDKKSWERYRALFMMHLNLKLTEQHLRLGEKFDKREALFFNAPWREENIESLATAERCYHTARQYWHEAALWAERANADQFRFLFLTELPAWEDERERIARGTLNYARTISRELARLEAVRARFMEMNDTY
SIO_010081: TPCCA_RS01295
subclass of: SO_0000673
so part of: TPCCA_RS01295
location: complement(267884..268594)
location: region:267884-268594:-1
so has part: feature:267884-268594:-1:exon

WP_013944932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267884-268594:-1:exon

TPCCA_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01300
old locus tag: TPCCA_0259
so part of: sequence
location: 268757..269275
location: region:268757-269275:1
so has part: feature:268757-269275:1:exon
subclass of: SO_0000010

position:268757:1
position: 268757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269275:1
position: 269275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268757-269275:1:exon

TPCCA_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01300
old locus tag: TPCCA_0259
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342342.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysM peptidoglycan-binding domain-containing protein
translation: MMRKFSTGLLLWIAFISGVTSCKSAPPAEELVEVAPPVEEQEEEPMTPVPEEPMAVAPQEVSRAEYVVKNEDTLSQIAKKFYGSRIRGYYFPIIMACSEGVVTHPDRIRPGMKLVIPNFDEFMADPDHVRKGLEAFAQVERIYRSEGKMKLAEFMNKLGEKIGKTEPRDMPR
SIO_010081: TPCCA_RS01300
subclass of: SO_0000673
so part of: TPCCA_RS01300
location: 268757..269275
location: region:268757-269275:1
so has part: feature:268757-269275:1:exon

WP_245522166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268757-269275:1:exon

TPCCA_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01305
old locus tag: TPCCA_0260
so part of: sequence
location: complement(269406..270545)
location: region:269406-270545:-1
so has part: feature:269406-270545:-1:exon
subclass of: SO_0000010

position:269406:-1
position: 269406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270545:-1
position: 270545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269406-270545:-1:exon

TPCCA_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01305
old locus tag: TPCCA_0260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342343.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SH3 domain-containing protein
translation: MEIQKKKVELPFWQLKLCRTKKEALQYAERLREYRYSYAASVLDGLPLREGPENTAPQVYRLREGQAVKLLWKGTGKAVYRGENRLEGDWFKVMTEDGTTGWCFSHGLSLFDERESRPTVRETDDLARDRDLQHVLNSAWYPEYYRTMVEQRRIDLEKMASGWGLFVGEKKGLARIELPDAHYAFPYSRLVKTGSNGYLFDGSSLSIYVRDAHTLAAQFTDEAGRLRIERFVTLEKTPEEIIAEEQLRRSALLEHVCTPGLRLHSEIYGTLSFTERNVFTWTGARALSPALIPAGAGSTGRVALRCFIDQSLKSEYEGVLSFDFDSAQEWVHFLYLRTPGGLKLEHIDSTHLKDATVLRRSVSPVVLYFAPEGHAEPQP
SIO_010081: TPCCA_RS01305
subclass of: SO_0000673
so part of: TPCCA_RS01305
location: complement(269406..270545)
location: region:269406-270545:-1
so has part: feature:269406-270545:-1:exon

WP_245522167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269406-270545:-1:exon

TPCCA_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01310
old locus tag: TPCCA_0261
so part of: sequence
location: 270867..271910
location: region:270867-271910:1
so has part: feature:270867-271910:1:exon
subclass of: SO_0000010

position:270867:1
position: 270867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271910:1
position: 271910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270867-271910:1:exon

TPCCA_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01310
old locus tag: TPCCA_0261
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881710.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cyclic nucleotide-binding domain-containing protein
translation: MGAALFLGVAWKTEADVPKAIQYKANSVIYFSGDLDDRVMLLNKGHVALTFADVETGSQVTEYIKTGEFFGVKSALGNFPREENAITLVDSIVYAFGSQEFEAFAQTNIRIVMKMLKVFSRQLRSVHRQLESLLDSQEETNNEEGLYTVAHAFHASEHYLAASQVAQRYRELYPDGKHRNDIASMLESADGTVGRGFEEAGAQGSDAGFEVPSAFAESAVDSEVGDLRAAELLERQGKWGEAYEHYRLGCASNGGVGAEAAYLGAGRCLFEQREFVRSIQTFTECITRNPKSTRLAEVLMYLGQCYQGMGRPDKAISFYDKALSTAPESLVPRIKELQRSCEEASHG
SIO_010081: TPCCA_RS01310
subclass of: SO_0000673
so part of: TPCCA_RS01310
location: 270867..271910
location: region:270867-271910:1
so has part: feature:270867-271910:1:exon

WP_013944935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270867-271910:1:exon

TPCCA_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01315
old locus tag: TPCCA_0262
so part of: sequence
location: 271903..272562
location: region:271903-272562:1
so has part: feature:271903-272562:1:exon
subclass of: SO_0000010

position:271903:1
position: 271903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272562:1
position: 272562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271903-272562:1:exon

TPCCA_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01315
old locus tag: TPCCA_0262
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342784.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Crp/Fnr family transcriptional regulator
translation: MADAFASFTRFAKKFQRGSVIFAEFDVGESFYLVQSGRVRLIKIINGKERYLDVLQPGEIFGEMSILDNSPRSASAVAYDDVVALEFNRENFEVLMMGNPAIAMRLLKTFVRRIYTQKRRFMILTIQDSTARVGDVFLMLDETQPHVDRSSDARSFDISIEEIARWAGLSDREVQDALRRLSDQRKVECQERRIVVKNMTDLNRYVTMRRGKGDGLPLG
SIO_010081: TPCCA_RS01315
subclass of: SO_0000673
so part of: TPCCA_RS01315
location: 271903..272562
location: region:271903-272562:1
so has part: feature:271903-272562:1:exon

WP_013944936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271903-272562:1:exon

TPCCA_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01320
old locus tag: TPCCA_0263
so part of: sequence
location: 272834..274360
location: region:272834-274360:1
so has part: feature:272834-274360:1:exon
subclass of: SO_0000010

position:272834:1
position: 272834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274360:1
position: 274360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272834-274360:1:exon

TPCCA_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01320
old locus tag: TPCCA_0263
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944938.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fibronectin type III domain-containing protein
translation: MLYAKEAQLLLGGAQGWQSLTRVENLRTRVGRAGHPALELSSAARTRSVRGDLYLSFDDPLVSDLYGRYRVQSSSAQHVGEERAHRGAGAALFRTMHRSVPSAYGGAAGGDGAEGVVLQPNPGALFYGSQALSSFSIEFWLYPAVSENGAVLFRWRSSLSDRGRSFYQHIVAHILQHRLEWRAEGLWNDVRGQAVSLRLRSRTHVLPERWSHHMLTYDETRGVLEYRMNGRTECLEYLTDSQDETGQVWHARLGAAAAVHIGERYSGLIDEVVITEEFVPPSEAGEVLRRFNRLARFDQAGGRFESEITDAGGLQAVVRRVNADVDIPEQADVAFFVRVGQTKEDWTSEYPLWQPVVAGQPLSGLEGRYFQVAVQLYPDGAGRKTPVVHAVTVDYEQDERPLPPGRLFAQAADGSVILTWTPSVDFDVEGYVVYVGDTSGMYFVAGSPIRVGKRLSYTVRGLQNGVLYFFALAAYDGAGEERIGQLSAEAWARPLPHLGTADIPSQGG
SIO_010081: TPCCA_RS01320
subclass of: SO_0000673
so part of: TPCCA_RS01320
location: 272834..274360
location: region:272834-274360:1
so has part: feature:272834-274360:1:exon

WP_245522168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272834-274360:1:exon

TPCCA_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: deoC
locus tag: TPCCA_RS01325
old locus tag: TPCCA_0264
so part of: sequence
location: 274365..275021
location: region:274365-275021:1
so has part: feature:274365-275021:1:exon
subclass of: SO_0000010

position:274365:1
position: 274365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275021:1
position: 275021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274365-275021:1:exon

TPCCA_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: deoC
locus tag: TPCCA_RS01325
old locus tag: TPCCA_0264
EC number: 4.1.2.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944939.1
GO function: GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO process: GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: deoxyribose-phosphate aldolase
translation: MELNAYIDHTLLRPSASEAEVLRLCQEAQHYRFASVCVNPCHVALAAGAVRGTAVRVCSVIGFPFGTHVTEVKCTEAQRALDDGAQELDMVVRIDKVCAGEREVVEREIAQVAARCHARGAIVKVIVETALLDEMHIAFACSCVEAGHADFIKTSTGYASRGGTEGDIQCFKKYLKGETKIKASGGIRTRAQAQRFIELGCARIGTSNGVAIMEERAS
SIO_010081: TPCCA_RS01325
subclass of: SO_0000673
so part of: TPCCA_RS01325
location: 274365..275021
location: region:274365-275021:1
so has part: feature:274365-275021:1:exon

WP_013944939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274365-275021:1:exon

TPCCA_RS05235
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: ssrA
locus tag: TPCCA_RS05235
old locus tag: TPCCA_nc0002
so part of: sequence
location: 275081..275434
location: region:275081-275434:1
so has part: feature:275081-275434:1:exon
subclass of: SO_0000659

position:275081:1
position: 275081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275434:1
position: 275434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275081-275434:1:exon

TPCCA_RS05235
type: Transfer Messenger RNA
subclass of: SO_0000584
RO_0002162: 545776
gene: ssrA
locus tag: TPCCA_RS05235
old locus tag: TPCCA_nc0002
product: transfer-messenger RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00023
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TPCCA_RS05235
subclass of: SO_0000673
so part of: TPCCA_RS05235
location: 275081..275434
location: region:275081-275434:1
so has part: feature:275081-275434:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275081-275434:1:exon

TPCCA_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: brnQ
locus tag: TPCCA_RS01330
old locus tag: TPCCA_0265
so part of: sequence
location: complement(275453..276820)
location: region:275453-276820:-1
so has part: feature:275453-276820:-1:exon
subclass of: SO_0000010

position:275453:-1
position: 275453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276820:-1
position: 276820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275453-276820:-1:exon

TPCCA_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: brnQ
locus tag: TPCCA_RS01330
old locus tag: TPCCA_0265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944940.1
GO function: GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
GO process: GO:0015803 - branched-chain amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid transport system II carrier protein
translation: MIHTHTLSLSFMLFSFFFGAGNLILPPLLGKHAGTTLATALLGFATSAVLIPIAGLITIAHAGGIVPLSERVGKRFAHLYPAITLLVIGPALSIPRAGIVPFALAIAPLIHRANTTLLAQLIYTTCFFIVSYWLCMRPHTLSNTLGKVLTPALLVLVLLLFLASFTPTLGPYLPAQGAYATHIPFSQGFLDGYLTTDALASLMFGNMILTYLHRTRYTTAPFPPAPANILADMRTVAWIAGAMLFFTYGVLAHLGALSARQLPHTINGAHILASVSLHLFGKAGIALLGLIFTIACLTTCAGLLVSVSEYFHKRAPRVSYLCWIRLFTISGFALANTGLERILAYGTPLLMILYPISLVLIGISHLERLIRIPRAAYRLTVWSAGTLSTCAVGTPLVAHTRIGHVLNTLIHTLPLAQEQLCWLIPSAAVLILSTAHARLREKTCTPRGTLPLTDN
SIO_010081: TPCCA_RS01330
subclass of: SO_0000673
so part of: TPCCA_RS01330
location: complement(275453..276820)
location: region:275453-276820:-1
so has part: feature:275453-276820:-1:exon

WP_013944940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275453-276820:-1:exon

TPCCA_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01335
old locus tag: TPCCA_r0004
so part of: sequence
location: 277065..278613
location: region:277065-278613:1
so has part: feature:277065-278613:1:exon
subclass of: SO_0000573

position:277065:1
position: 277065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278613:1
position: 278613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277065-278613:1:exon

TPCCA_RS01335
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 545776
locus tag: TPCCA_RS01335
old locus tag: TPCCA_r0004
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TPCCA_RS01335
subclass of: SO_0000673
so part of: TPCCA_RS01335
location: 277065..278613
location: region:277065-278613:1
so has part: feature:277065-278613:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277065-278613:1:exon

TPCCA_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01340
old locus tag: TPCCA_t0015
so part of: sequence
location: 278725..278798
location: region:278725-278798:1
so has part: feature:278725-278798:1:exon
subclass of: SO_0000663

position:278725:1
position: 278725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278798:1
position: 278798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278725-278798:1:exon

TPCCA_RS01340
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS01340
old locus tag: TPCCA_t0015
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:278759..278761,aa:Ala,seq:tgc)
SIO_010081: TPCCA_RS01340
subclass of: SO_0000673
so part of: TPCCA_RS01340
location: 278725..278798
location: region:278725-278798:1
so has part: feature:278725-278798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278725-278798:1:exon

TPCCA_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01345
old locus tag: TPCCA_r0005
so part of: sequence
location: 278919..281871
location: region:278919-281871:1
so has part: feature:278919-281871:1:exon
subclass of: SO_0000573

position:278919:1
position: 278919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281871:1
position: 281871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278919-281871:1:exon

TPCCA_RS01345
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 545776
locus tag: TPCCA_RS01345
old locus tag: TPCCA_r0005
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TPCCA_RS01345
subclass of: SO_0000673
so part of: TPCCA_RS01345
location: 278919..281871
location: region:278919-281871:1
so has part: feature:278919-281871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278919-281871:1:exon

TPCCA_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rrf
locus tag: TPCCA_RS01350
old locus tag: TPCCA_r0006
so part of: sequence
location: 281920..282030
location: region:281920-282030:1
so has part: feature:281920-282030:1:exon
subclass of: SO_0000573

position:281920:1
position: 281920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282030:1
position: 282030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281920-282030:1:exon

TPCCA_RS01350
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 545776
gene: rrf
locus tag: TPCCA_RS01350
old locus tag: TPCCA_r0006
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TPCCA_RS01350
subclass of: SO_0000673
so part of: TPCCA_RS01350
location: 281920..282030
location: region:281920-282030:1
so has part: feature:281920-282030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281920-282030:1:exon

TPCCA_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01355
old locus tag: TPCCA_0267
so part of: sequence
location: 282088..282453
location: region:282088-282453:1
so has part: feature:282088-282453:1:exon
subclass of: SO_0000010

position:282088:1
position: 282088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282453:1
position: 282453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282088-282453:1:exon

TPCCA_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01355
old locus tag: TPCCA_0267
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944941.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polymer-forming cytoskeletal protein
translation: MASARSFDLVDLDDEDYGTILAEDVEFSGTVRFEEPFMVRGVFEGSIESSGDLMVEEQARVRAEIVADRVVIKGEVIGNVTAMSVVRVFPCGRLIGDVTAPEVVLESGCFFSGVCSMPESG
SIO_010081: TPCCA_RS01355
subclass of: SO_0000673
so part of: TPCCA_RS01355
location: 282088..282453
location: region:282088-282453:1
so has part: feature:282088-282453:1:exon

WP_013944941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282088-282453:1:exon

TPCCA_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01360
old locus tag: TPCCA_0268
so part of: sequence
location: 282483..283103
location: region:282483-283103:1
so has part: feature:282483-283103:1:exon
subclass of: SO_0000010

position:282483:1
position: 282483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283103:1
position: 283103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282483-283103:1:exon

TPCCA_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01360
old locus tag: TPCCA_0268
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881717.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MVARFLLPVVFCFVCRRLCSQQSGLAFYRAGSYREAIRCCEEAIAQGSKDLEHYLVLAWALVAVGKYHEAAQWALEGRAVAAHDPRLIEAQAEAFCHLGRNEEALRLFQDYIACAPNGARQTAAYYLMGEIYLRTSRFLHADIAFSVALQLDSLNDFWWARLGYARERAGDYRYALQAYDRALQLNRDLADARRGRERVLRYVFRR
SIO_010081: TPCCA_RS01360
subclass of: SO_0000673
so part of: TPCCA_RS01360
location: 282483..283103
location: region:282483-283103:1
so has part: feature:282483-283103:1:exon

WP_245522169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282483-283103:1:exon

TPCCA_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: mtaB
locus tag: TPCCA_RS01365
old locus tag: TPCCA_0269
so part of: sequence
location: 283113..284561
location: region:283113-284561:1
so has part: feature:283113-284561:1:exon
subclass of: SO_0000010

position:283113:1
position: 283113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284561:1
position: 284561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283113-284561:1:exon

TPCCA_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: mtaB
locus tag: TPCCA_RS01365
old locus tag: TPCCA_0269
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881718.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
translation: MFSVRIETLGCRLNHVESESLAALFLQEGFAVCRGNTSTAPVVLCVINTCTVTSKAEQKARRLVRLLLRTYPTAIALVTGCYAQLESASLEAMDDRVLAFPGKQKDVLSLLPSCLRALLVQRGPAPIDQYVCGMRALLASLKKKIISLELTSEFPSQTHMPTRNALPQLTGVSHAPRVSVSSFSEPTAVPRFALYAPRFLFHSRASIKVQDGCNSGCAFCRIRFARGRAVSLETHEVIGRVQALEARGMSEVVLTGVNLSQYRSGSIDFAGLLELIVQETHTIHIRISSLYPESVTSAFLRAIAHTRVSPHFHLSVQSGSDRVLRRMRRAYTRADIYQAVSDLRSVREEPFLGCDIIVGFPGETEEDFADTQRMCKTLRFAGIHVFPFSARPGTEAFAMDAKVPQRIAGERVAAMQQLAEKNYRAYLEYWNGRELCAVVEQSVARVLTENYLSLPIIERGGVAASAGSHVRIRVHNGGAILL
SIO_010081: TPCCA_RS01365
subclass of: SO_0000673
so part of: TPCCA_RS01365
location: 283113..284561
location: region:283113-284561:1
so has part: feature:283113-284561:1:exon

WP_013944943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283113-284561:1:exon

TPCCA_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01370
old locus tag: TPCCA_0270
so part of: sequence
location: 284545..286071
location: region:284545-286071:1
so has part: feature:284545-286071:1:exon
subclass of: SO_0000010

position:284545:1
position: 284545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286071:1
position: 286071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284545-286071:1:exon

TPCCA_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01370
old locus tag: TPCCA_0270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944944.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CCA tRNA nucleotidyltransferase
translation: MLSSCEFLIRSGDSLLLEKNEHAVEREEGSVRVFPVCPLLREVSERFIRAGFCIYVVGGAVRDFLLNRSAHDWDLATDAPPERVRMLFRRTVPTGIEHGTVTILFRGHSIECTTFRVESDYSDRRHPDSVCFAARIEDDLARRDFTVNAFAAALPSGEIIDVCGGYADLRNGLICSVGDAHARFSEDALRPLRAVRFAAQLSFSIEARTREAIIALRAHTARISRERVRDELSKMLCTPRPSIALRLMEETGLLHTLFPALAQVCGRNEGEEKETQDSLQVSPQQRRDARTFAACAFAACDRVPAELAVRLAALLFPLAHYRTLPASGTGAALFICPPALAEARELLRGLKYPNYLTAQVCHLVAHARFTPHECWSEGTLRRFVVTVGTTQLESLCVLRRAYLADDDYRISAQPGVSCENAREGKKMQEQFEIFVTRVRRVAAQLPVHGIRDLVVNGRDLIAQGIPPGPTIGHILNALFDMVLMQPSRNTRPQLLEHAQEIVRTMAQN
SIO_010081: TPCCA_RS01370
subclass of: SO_0000673
so part of: TPCCA_RS01370
location: 284545..286071
location: region:284545-286071:1
so has part: feature:284545-286071:1:exon

WP_013944944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284545-286071:1:exon

TPCCA_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01375
old locus tag: TPCCA_0271
so part of: sequence
location: complement(286068..287042)
location: region:286068-287042:-1
so has part: feature:286068-287042:-1:exon
subclass of: SO_0000010

position:286068:-1
position: 286068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287042:-1
position: 287042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286068-287042:-1:exon

TPCCA_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01375
old locus tag: TPCCA_0271
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881720.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MGKDKLGKGIDALLQESSDRYDVRDSDGVQTVHYLDPTLLQANPHQARRTFAQESLEELAASIREHGVIQPVLAEKNQDGSWVIIAGERRTRAAILAGLNRIPVIVRTCDHEKKLAIALIENVQRENLNPLEEARAYQHIMDLGNLSHEELAQRVGKNRSTITNALRLLKLPPEVQQLLSSRTLSAGHARALLSLTDMQLCVSVAQYVVTHALSVRAAEECVACLNRGGSLHDYAGARAHTAASSPSPVGSATDITRLPPSSLSTDAQLNARIRNADIADIEQQLLEQLGTKVRISGNLQRGRIEITYFSQAELERLYGLLKAH
SIO_010081: TPCCA_RS01375
subclass of: SO_0000673
so part of: TPCCA_RS01375
location: complement(286068..287042)
location: region:286068-287042:-1
so has part: feature:286068-287042:-1:exon

WP_013944945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286068-287042:-1:exon

TPCCA_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01380
old locus tag: TPCCA_0272
so part of: sequence
location: complement(287029..287790)
location: region:287029-287790:-1
so has part: feature:287029-287790:-1:exon
subclass of: SO_0000010

position:287029:-1
position: 287029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287790:-1
position: 287790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287029-287790:-1:exon

TPCCA_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01380
old locus tag: TPCCA_0272
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944946.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MGKTLVFVNQKGGVGKTTSAINLGAYLALAGKKTLLVDFDPQGNMSSGLGLARGLTVYDLLAGKARINSVLRTTPVRNLFAIPASIDLSGATVELVDEQDRELYLKKILAEVKDTYDFILIDCPPSLGILTLNGLAAANEVFIPLQCEYFALEGLTLLLQTVKRVQSGLNTALSIGGIFFTMYDTRTKLAQEVVKQVTTYFGDKVFNTIIPRNVKLSEAPSHGLPISSYDAQCAGARSYEKLAREIVARDGQR
SIO_010081: TPCCA_RS01380
subclass of: SO_0000673
so part of: TPCCA_RS01380
location: complement(287029..287790)
location: region:287029-287790:-1
so has part: feature:287029-287790:-1:exon

WP_013944946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287029-287790:-1:exon

TPCCA_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01385
old locus tag: TPCCA_0273
so part of: sequence
location: 287923..288714
location: region:287923-288714:1
so has part: feature:287923-288714:1:exon
subclass of: SO_0000010

position:287923:1
position: 287923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288714:1
position: 288714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287923-288714:1:exon

TPCCA_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01385
old locus tag: TPCCA_0273
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881722.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSYAEVILFLIKKHCIDCGEAFFGIVVLNALCLAGVGYSLLWHQGPGRSVLFVLVLATLYACLCAFCVVRGERGCDTLADTNLRVFTHALREVWLQSLWCALLQCVLFRTGKYVCTYYFARTHSVSTACGILSAWTYALACGALLWFVPVRARYRTHFRQCVYLSARVFFEHPCITFLMVLYSMGVLALSVPMAFLFPGPCGIVLLWQDVLRTLCFRRAWLAAHEGRKAACAPPIPWEQLMCQMRAQSRAHTVGELFSPWKS
SIO_010081: TPCCA_RS01385
subclass of: SO_0000673
so part of: TPCCA_RS01385
location: 287923..288714
location: region:287923-288714:1
so has part: feature:287923-288714:1:exon

WP_013944947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287923-288714:1:exon

TPCCA_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01390
old locus tag: TPCCA_0274
so part of: sequence
location: complement(288752..289252)
location: region:288752-289252:-1
so has part: feature:288752-289252:-1:exon
subclass of: SO_0000010

position:288752:-1
position: 288752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289252:-1
position: 289252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288752-289252:-1:exon

TPCCA_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01390
old locus tag: TPCCA_0274
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944948.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytidine/deoxycytidylate deaminase family protein
translation: MGQREELVTRPSWDEYFMEVCHAIAKRATCDRGRAGCVIARDHHLLVTGYAGAPRGLLHCDEHGHQLRTVQHEDGTCTRHCVRTVHAEQNALCQAARLGIGLEGATLYCTMTPCRTCAMLIINCGIVRVVAEKRYQTATESIMLFAQAQIALEHIYQNPAEYGTPS
SIO_010081: TPCCA_RS01390
subclass of: SO_0000673
so part of: TPCCA_RS01390
location: complement(288752..289252)
location: region:288752-289252:-1
so has part: feature:288752-289252:-1:exon

WP_013944948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288752-289252:-1:exon

TPCCA_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01395
old locus tag: TPCCA_0275
so part of: sequence
location: complement(289341..290090)
location: region:289341-290090:-1
so has part: feature:289341-290090:-1:exon
subclass of: SO_0000010

position:289341:-1
position: 289341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290090:-1
position: 290090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289341-290090:-1:exon

TPCCA_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01395
old locus tag: TPCCA_0275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881724.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WecB/TagA/CpsF family glycosyltransferase
translation: MEQTQLVTRIEFLSVPLDVVREEYLCTVILSLLEKKEPQHIIFLSLWDVLKARHNHEFRTMVDRAALCLPTSYSIVRGARFLGLPTPIFRHPFQFIITLLNVMDTHYKSLYLFGGRGQSLLEAERNVHSTFPGLSVVGRFHGFYRKTLENNIITAIVKSNASLVIVGNGVPGGVRWIARNRAHFAGGIFVQDSEVIDIFSKRRKRPRAKELLHGRSPWGQTLHPLRWHRSVRYVWYIFLLLFYRIFRTK
SIO_010081: TPCCA_RS01395
subclass of: SO_0000673
so part of: TPCCA_RS01395
location: complement(289341..290090)
location: region:289341-290090:-1
so has part: feature:289341-290090:-1:exon

WP_013944949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289341-290090:-1:exon

TPCCA_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01400
old locus tag: TPCCA_0276
so part of: sequence
location: complement(290069..290908)
location: region:290069-290908:-1
so has part: feature:290069-290908:-1:exon
subclass of: SO_0000010

position:290069:-1
position: 290069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290908:-1
position: 290908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290069-290908:-1:exon

TPCCA_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01400
old locus tag: TPCCA_0276
EC number: 2.1.1.193
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342352.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (uracil(1498)-N(3))-methyltransferase
translation: MKQLLITAEPDSGGYVQLSGKDFHYMVRVRRARVGDTFTLRTQAGAQYSAVVSALDIHTRSLILHCTPMPPVDEKTQVTLVLLQWMPRARVFDAIVRHATELGTARIIPIRGERSLIRDEKDTQHARLQRIVREARQQSGSAVNTRVDTLHSLLGALHMLEQEFPYPSAVRIYCSEKHVGGSFHELLWTGRSTHCTAYRTPTEPNAPHNTPDVCAQAVILAVGAEGGFSDTEECTLHDAHFAPLHFRTNVLRVETAALYALAGAHLLLSEAALWNKRSW
SIO_010081: TPCCA_RS01400
subclass of: SO_0000673
so part of: TPCCA_RS01400
location: complement(290069..290908)
location: region:290069-290908:-1
so has part: feature:290069-290908:-1:exon

WP_013944950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290069-290908:-1:exon

TPCCA_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01405
old locus tag: TPCCA_0277
so part of: sequence
location: complement(291123..292583)
location: region:291123-292583:-1
so has part: feature:291123-292583:-1:exon
subclass of: SO_0000010

position:291123:-1
position: 291123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292583:-1
position: 292583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291123-292583:-1:exon

TPCCA_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01405
old locus tag: TPCCA_0277
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505444.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S41 family peptidase
translation: MSVLRLFALLVCCLITSAAPFPTWTAAYLPQSSEEDERMQTVQDVYEFLRKYYVDEVDPHILYKGALEGMINSLQDPYTTFVESDSISGVNLQDTTKGFFGGIGVVISKSRTSTPGKPAYVEVTAAIEDTPSWKGGIRPRDLIVKIGAMSTDTMTMDEVLKKLRGPIGTKVTLVVKRGTKIFRPFTLTRAKIEIPTVKYAKIDPNIAYVRLIEFNPVTATRMVETVTELRRQGCDRLILDLRNNPGGLITAAVDVTSSFIPSGTVVTTKSRVQGHSITFSVNARAQKLPPSMPVIVLINRDSASASEIVSGALKDHKRAYLVGQTTYGKGVVQQVFDLNERESLKMTISRYYTPSDANIDKSGIPPDLEVRETEFTPEEEEALVSLFKSEKVKLFAEQNRTMNSERIKQYARGLAREFKLRSILVEKLIAQEYHRHNASFVYDLEYDEQLRRAVELIRTQDIHALVARTKTVKELQEGIQEKKKVS
SIO_010081: TPCCA_RS01405
subclass of: SO_0000673
so part of: TPCCA_RS01405
location: complement(291123..292583)
location: region:291123-292583:-1
so has part: feature:291123-292583:-1:exon

WP_245522170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291123-292583:-1:exon

TPCCA_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpsA
locus tag: TPCCA_RS01410
old locus tag: TPCCA_0279
so part of: sequence
location: 292876..295374
location: region:292876-295374:1
so has part: feature:292876-295374:1:exon
subclass of: SO_0000010

position:292876:1
position: 292876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295374:1
position: 295374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292876-295374:1:exon

TPCCA_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpsA
locus tag: TPCCA_RS01410
old locus tag: TPCCA_0279
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342720.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S1
translation: MRTVIIALDGPAGSGKSSVCRLLASRLGAQCLNTGSFYRAFTLAALRRVSELAVQACSPSPDPDAAVGCAAIPHATNLDTSYAPLTAQKKVALFDEAYWVSFARTVALSYRAGVMYVGEENVESLLRSDEVESAVSYFAAMPAIRAIMTGKIRSAVCGARVVCEGRDLTTVVFVDADLKCYLDASIEARVARRWAQGTSRLSKQELEQRMRARDAHDRARTVGGLRCAPDALYVDTSCLTIEEVCERIAREAHRRALWGGERSVENQEGKGTPLVPRQLQERYSFEAPEPGSVRMGTVVQVNAGTVFVDIGGKSEGRVPVEEFEAPPKAGDGVRVYVERVTPYGPELSKTKADRLGLKVKLRDAERDGTPVEGRIVRLTEKKSGFEVDLGAGMMAFLPISQSDCQKVDEPESLIGLTSKFYIERISQSKQHRGNDNIVINRRRYLEERARQAREEFFNSVHIEDSVSGVVKSFTSFGAFIDLGGFDGLLHVNDMSWGHVARPREFVKKGQTIELKVIRLDQAEKRINLSLKHFQPDPWLEFENKFGVNDVVKGRVTKIADFGAFIELAEGIEGLAHISEFSWVKKTSKPSDMVKIGDEVECMILGYDIQAGRVSLGLKQVTANPWEEIEARYPVGARFTRRIVKVTNAGAFIEMEEGIDGFLHVDDLSWVKRTRPADHELEVGKEIECMVIECDPQARRIRLGVKQLSDDPWQVFANAYGVGSTVEGEVSSVTDFGIFVRVPGGVEGLVRKQHLVENRDGDPDEALRKYAVGDRVKAVIVDMNVKDRKVAFSVRDYQRKVQRDELSRYMSAPRGEDEGSFTLGDLMRQTSGK
SIO_010081: TPCCA_RS01410
subclass of: SO_0000673
so part of: TPCCA_RS01410
location: 292876..295374
location: region:292876-295374:1
so has part: feature:292876-295374:1:exon

WP_245522171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292876-295374:1:exon

TPCCA_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01415
old locus tag: TPCCA_0282
so part of: sequence
location: 295637..296356
location: region:295637-296356:1
so has part: feature:295637-296356:1:exon
subclass of: SO_0000010

position:295637:1
position: 295637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296356:1
position: 296356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295637-296356:1:exon

TPCCA_RS01415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01415
old locus tag: TPCCA_0282
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MREQRRGIVRVDRFLELHRRLLVGVLVAILGGLGLSAGCLLVMTGLRARASAEVTRIAREWDVLRKPDNTVSASGHEVEGRGGSSIRAKEDALLARLESCASSPWRDGFAYAYAQACVADIFFARKEWEKAQQAYVRAAYGARRSYVAGVYYFNAASCADERGRFEEARELYQRSARVQDFPLVPRALFNVGRMEEALGRAAAATAAYTQLYERFPLNGWAALGKSRAIAISVGGGRAQ
SIO_010081: TPCCA_RS01415
subclass of: SO_0000673
so part of: TPCCA_RS01415
location: 295637..296356
location: region:295637-296356:1
so has part: feature:295637-296356:1:exon

WP_013944954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295637-296356:1:exon

TPCCA_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: coaD
locus tag: TPCCA_RS01420
old locus tag: TPCCA_0283
so part of: sequence
location: 296534..297013
location: region:296534-297013:1
so has part: feature:296534-297013:1:exon
subclass of: SO_0000010

position:296534:1
position: 296534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297013:1
position: 297013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296534-297013:1:exon

TPCCA_RS01420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: coaD
locus tag: TPCCA_RS01420
old locus tag: TPCCA_0283
EC number: 2.7.7.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881732.1
GO function: GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
GO process: GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pantetheine-phosphate adenylyltransferase
translation: MKAIFAGSFDPPTFGHLDLVLRARSLFAEVHVLVAVNVQKRYLLSECERVDLMRQVLGDRPGVYVFPWRSLVVTYARDVGARVLVRGVRNATDFCQEFDLAWVHRALDAGLETVFLATKPCYAALRSSMVREVASFGGDVSTFVPRVVARLLQEKFTQA
SIO_010081: TPCCA_RS01420
subclass of: SO_0000673
so part of: TPCCA_RS01420
location: 296534..297013
location: region:296534-297013:1
so has part: feature:296534-297013:1:exon

WP_013944955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296534-297013:1:exon

TPCCA_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01425
old locus tag: TPCCA_0284
so part of: sequence
location: 297118..298797
location: region:297118-298797:1
so has part: feature:297118-298797:1:exon
subclass of: SO_0000010

position:297118:1
position: 297118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298797:1
position: 298797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297118-298797:1:exon

TPCCA_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01425
old locus tag: TPCCA_0284
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342354.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spiro-SPASM protein
translation: MRADKGAVGTVAVVCAFDLSDYAFVPLCGTREQSCMKAVPGFVPCVEVRGCENTAGVGRRCAFERAVTAAYALPGCHRVCVYADATSAAKVARFMQCATPIFPSLRVNVLDDMRVSAFFAHVARVCAEYAQSGEEPEAVFVLRADAPFIDSVASAQLYAQHREYLAEYSFADGYPEGLFAAVVAPGLFPILATLTQDAHICFDTSFIFESIKTDINSFDLETMIAPVDVRHLRLEFYTSSKAQFLQCAAFTDITAENYAQLISAREHALRTVPAYYALELTRAYPLSSLYRPVSFPAQVENASLMPKEEACALIRRIADFSERAVISLSVFGDPVLYPALCDVVREILKYPGLSVLIETSGLGWQESVVRDLCECARNSARTPFAIGWIVFLDAVSSGMYSQVHRVSLSEAEFFLKEATEFAMQVHAQCPGVLWPQIFRMNENEKELEPFYRTWKERVGQVIVQKYDHVCGLLPDRRVADLSPLERYPCWHLKRDMIIFTDGRVPLCKEDVHCRHALGNAFQQDLAQIWRRGQDVYLQHVRAVHEGLCGQCDEYYTYNF
SIO_010081: TPCCA_RS01425
subclass of: SO_0000673
so part of: TPCCA_RS01425
location: 297118..298797
location: region:297118-298797:1
so has part: feature:297118-298797:1:exon

WP_013944956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297118-298797:1:exon

TPCCA_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01430
old locus tag: TPCCA_0286
so part of: sequence
location: 298718..299725
location: region:298718-299725:1
so has part: feature:298718-299725:1:exon
subclass of: SO_0000010

position:298718:1
position: 298718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299725:1
position: 299725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298718-299725:1:exon

TPCCA_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01430
old locus tag: TPCCA_0286
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505450.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCIFSTFVQYMKDYVGSVMSTIPIIFNEKNVAHTVVGGQLCPVASAFLGAVVLNRGVRWNRAEFFAQLTTLGIAPIVSVERSAAAPDVTGLAERFPFVKFITPLECISVGEMINLGVAELDVMYVLVLWSDMRIDPQGMSQHIQDILRTNTHMCIAPQLCSSHSTVLPTQIVPALRKSDFFTQPTECTTNHTPTIYPYDFVGIYHRDRFIQCGGFDFTIANAYWQNLDFGLRSYLWGECIEVNTQIRLFYEALPPQEDASADSSYRIFYLKNLAPLLEKDRAFISGTQFFSFFRNSGLHLIEAYRLFRDAQKWVAVNRYRFKKTAARLVSEWEPR
SIO_010081: TPCCA_RS01430
subclass of: SO_0000673
so part of: TPCCA_RS01430
location: 298718..299725
location: region:298718-299725:1
so has part: feature:298718-299725:1:exon

WP_245522172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298718-299725:1:exon

TPCCA_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01435
old locus tag: TPCCA_0288
so part of: sequence
location: 299725..302298
location: region:299725-302298:1
so has part: feature:299725-302298:1:exon
subclass of: SO_0000010

position:302298:1
position: 302298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299725-302298:1:exon

TPCCA_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01435
old locus tag: TPCCA_0288
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342356.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyltransferase domain-containing protein
translation: MEQDRSGVAVIVQARVDSTRLPGKALLPLMGEPLIHYVLQATRVIPAETYILACDEHSKKDFEPVARAHGFYCISGSAEDVLHRFCIAVKAFEHSFPIRTVVRVTGDNPFLFHEAAAAALLRYAELNEPDYFTFTGLPYGSGVEILKARSLLLADRLPLEAYDREHVGPALHRRPGIFVCVREPAAAAWYHPDVRVTVDTQEDFQRAQHMMEYVCTLQCPFPLSSDVILDAYAYARQVVVFVPSVKIGQGAGHLYRAAYLVLRLQGRVRCCLYVPDRSLLCKLSTPFPEELIVDTVPADASLIVVDNFRTSACEIELLQRTAPVLALDEGGSGRLNADYLIDVFPVLQSPGRRSLAALTNVRDSAFIPLPETRKEQDLPVANGRFFPIPGVTTVLVVYGAEDTHGRARSCAERIAALGFDTSVVVPGEASERTDGKVHIYPSLPHLKEHLHRWDVVVTHFGFTAFEAAAAGAAVLLVSPTPYHFLLSSAVGFSVIRSADPAAHELWSQMQQGIIIPDVVTRHSQCRDLADEIMRVARGKKHCCPFCGEMVAVDVVGRALHKTFQRCNECDMIFLSFVISDPVRYSESYFFEEYKAQYGKTYLEDFDQIRMHGARRMEEIERLYAEVFCADEGNSFAVDKKVLDVGCAYGAFLSAAKAAGWNAVGVDVCEFAVRHVRDTLCIPACVATFPLLPECFDFVIRHSFATNRPQQVSVYIRECTFSAVTLWFVIEHFQDLEAVLRKVADLLVPGGILAFSTPNFAGVTGMRFPHLFFAQSPCDHFTIWDARTVKKQLLRYGFTVKKIVVTGHHPERFYPHKHLKSGGLKWKMLMALSKWFQLGDTMEVYAIKQGDAHGSASK
SIO_010081: TPCCA_RS01435
subclass of: SO_0000673
so part of: TPCCA_RS01435
location: 299725..302298
location: region:299725-302298:1
so has part: feature:299725-302298:1:exon

WP_013944958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299725-302298:1:exon

TPCCA_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01440
old locus tag: TPCCA_0290
so part of: sequence
location: 302353..303186
location: region:302353-303186:1
so has part: feature:302353-303186:1:exon
subclass of: SO_0000010

position:302353:1
position: 302353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303186:1
position: 303186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302353-303186:1:exon

TPCCA_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01440
old locus tag: TPCCA_0290
EC number: 3.1.3.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944959.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD family hydrolase
translation: MSGAQVRLVVTDMDGTFLDSENNIPPENKQAVKCLHEKNIPFVIATGRMLPMVQEYVRQLQLVGPVVGYNGGMIREIKTGKTIFQKCFTAEAFARVLEYGMAHRLDYLVYTSDSVYAPDYSVRIRAFHEYNRLARRGGSALIPIFPIEALSGDRQQQVMKILVQNFSPSDLETAAEFIGSLHGVHCEHSMPHLIDVMPEGVDKGNALHILCQYYGISLEQVCVFGDQRNDIVMFKAAGVSFCMRNGHEEAKKHATYIAESNDDAGFAQALKRYGVVE
SIO_010081: TPCCA_RS01440
subclass of: SO_0000673
so part of: TPCCA_RS01440
location: 302353..303186
location: region:302353-303186:1
so has part: feature:302353-303186:1:exon

WP_013944959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302353-303186:1:exon

TPCCA_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01445
old locus tag: TPCCA_0291
so part of: sequence
location: 303223..304104
location: region:303223-304104:1
so has part: feature:303223-304104:1:exon
subclass of: SO_0000010

position:303223:1
position: 303223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304104:1
position: 304104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303223-304104:1:exon

TPCCA_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01445
old locus tag: TPCCA_0291
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881740.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha-hydroxy-acid oxidizing protein
translation: MVRSARSEYKCRLCARCDGYGCRGQLPGMGGVFNSANFIANCLAWKKYVPQRHELPVVRLAPMTGAVENVGYPDEVSFYYRLIEAVSGTGVLLSVGDGCPDIKLQSGIAALRSFKKKAAVFIKPYVNKKIFERIEWGRDVAEFVGVDIDAYHIVTMRDKVQLEKKTPTHLRAVRRFAKLPIVVKGIFAPRDVELVRELKPDVAIVSNHGGRVETARGSTADFLFEYGGELARCAGEVWVDGGIRSYAHLCAARELGAQQVLIGRPFITALLKGGKGGVQLLVRNMTDRSVRCV
SIO_010081: TPCCA_RS01445
subclass of: SO_0000673
so part of: TPCCA_RS01445
location: 303223..304104
location: region:303223-304104:1
so has part: feature:303223-304104:1:exon

WP_010881740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303223-304104:1:exon

TPCCA_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01450
old locus tag: TPCCA_0292
so part of: sequence
location: 304095..305348
location: region:304095-305348:1
so has part: feature:304095-305348:1:exon
subclass of: SO_0000010

position:304095:1
position: 304095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305348:1
position: 305348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304095-305348:1:exon

TPCCA_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01450
old locus tag: TPCCA_0292
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881741.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpA family protein
translation: MCMMGSVFSRKGMLCVLAVWCAASAAYPLRLRYKFRKGDTHRINSLIREDVFVNDTLAHTAEITNRITVHVSEVRVAHGSAPDAARYVCHFMTSEKSPNNTFRWGRHYESIFWRDAFGVYDIDRSFFMPVVRNVPVFPDYDIEVGDTWEHEAEEAHDLRDGFGIQTPFIVPFTVSYTYRGEVQRGSRRYHHITAAYSMSYESPKRTHGVQRNAKEGMYPVRTTGVSKQNLYWDNELGNIAEYDDEFRILLYLSGGTVLRYQGTATAKNFAPERFDPARTVVELQETLKDLHMPDAKVRETEEGVTISIENVQFDADSASLAPSEYEKLRKIAELLRAFPDRELLVSGHAARRGSVQDQQRISEERADVVARYLQELGVVDAAHVYTRGCGAQQSIAPNDSEDGRRKNRRVEITIISK
SIO_010081: TPCCA_RS01450
subclass of: SO_0000673
so part of: TPCCA_RS01450
location: 304095..305348
location: region:304095-305348:1
so has part: feature:304095-305348:1:exon

WP_010881741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304095-305348:1:exon

TPCCA_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01455
old locus tag: TPCCA_0294
so part of: sequence
location: 305514..306779
location: region:305514-306779:1
so has part: feature:305514-306779:1:exon
subclass of: SO_0000010

position:305514:1
position: 305514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306779:1
position: 306779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305514-306779:1:exon

TPCCA_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01455
old locus tag: TPCCA_0294
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881743.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose-phosphate pyrophosphokinase
translation: MRCSGFTDLAIVACPGGEHFADETIKHLTRVCERKFHQRMDRLTDRYGLDSGSVIRDANFYRDLFSTELCAHDDVRRFNPPHFKVDAQFICFLNGELKTQINECIRGKDVFIFQDVENHQPVLVNNGKSKKIFSVNDHVMMLIVTIDAVRHAGAGRVTLVLPTYPYSRQHKKCGREGLTAGLLGSVYEYLGVSHIVTLDLHSREIENAFHRTRLENLHASYQIIRELAKIENLSDPDIPFVVVAPDSGAVERNKFYSSGLKKPLAMIYKVRDYSVVAQNAKQSNIVEINLLGDVEGKTAFIADDMLGSGGTMLKAMEFLKSRGAKQVIAAVSLPFFTGNALELFDEAYEKRYFSRIIGTNAVFHTQLSHKQWYTETDVSGLFARVIARIHHNQSLSSLLDDRSIIERLLHARLSVAGTPRA
SIO_010081: TPCCA_RS01455
subclass of: SO_0000673
so part of: TPCCA_RS01455
location: 305514..306779
location: region:305514-306779:1
so has part: feature:305514-306779:1:exon

WP_010881743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305514-306779:1:exon

TPCCA_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01460
old locus tag: TPCCA_0295
so part of: sequence
location: 306798..308042
location: region:306798-308042:1
so has part: feature:306798-308042:1:exon
subclass of: SO_0000010

position:306798:1
position: 306798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308042:1
position: 308042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306798-308042:1:exon

TPCCA_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01460
old locus tag: TPCCA_0295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944961.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FGGY-family carbohydrate kinase
translation: MGSGIFVADIGTSSLKAAIISQDGKVLQYQRVFFPQPVKAQDWVRSFFTVFERLRAVHHVIAITISGNGPSVVAVHKKSHAEDQLILWNQAGASDPRCGVSLFLPKVLLLLQRLHFCARDVQFFLSSHEYLIYRLTGCAVTVLPERRYMPTYWTSESLRACALPETLFAPFVAPGSIVASYRGIPVVCGAPDFAAALIGTNTLHAGSGCDRAGSSEGLNVCVRLPPAIGSADARVRVLPSLRADFWNISFLIADSGSRFASYMRRTHAQGFGERMGQIMALPFQLHDAYPPTAVGEGRQLVEDLAFEVCAGLEYLESVTQLQPVYTVSGGQAKDSRWLQLKADVSGRCFVLPEIHDAELTGNAALACVALGFDADMQTAAQRLCRLKREFIPNRARHEQYAQKRLLRAAREAQG
SIO_010081: TPCCA_RS01460
subclass of: SO_0000673
so part of: TPCCA_RS01460
location: 306798..308042
location: region:306798-308042:1
so has part: feature:306798-308042:1:exon

WP_013944961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306798-308042:1:exon

TPCCA_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01465
old locus tag: TPCCA_0296
so part of: sequence
location: 308128..308763
location: region:308128-308763:1
so has part: feature:308128-308763:1:exon
subclass of: SO_0000010

position:308128:1
position: 308128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308763:1
position: 308763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308128-308763:1:exon

TPCCA_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01465
old locus tag: TPCCA_0296
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881745.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dephospho-CoA kinase
translation: MRGFCPLIGVIGRSGAGKNVVSRLLAERGCYCIDADARTRELLESYGDSIVERFQVAAAARGLSLRRKDGGLHSAHLGVLLFSEPKLLQQHEEFLLPKVTRLLCEDIARAQAARPKAIVLNAPTLHKTELLQACSFVLYIWAPSILRMWRCKKRERVSFTHLLRRFSAQKGFYAQSIAQNADTYTVANCGRVASLARKVDCILTRRGVLGE
SIO_010081: TPCCA_RS01465
subclass of: SO_0000673
so part of: TPCCA_RS01465
location: 308128..308763
location: region:308128-308763:1
so has part: feature:308128-308763:1:exon

WP_013944962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308128-308763:1:exon

TPCCA_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01470
old locus tag: TPCCA_0297
so part of: sequence
location: 308766..309539
location: region:308766-309539:1
so has part: feature:308766-309539:1:exon
subclass of: SO_0000010

position:308766:1
position: 308766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309539:1
position: 309539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308766-309539:1:exon

TPCCA_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01470
old locus tag: TPCCA_0297
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505451.1
GO function: GO:0042834 - peptidoglycan binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SPOR domain-containing protein
translation: MEQKRILWIVISLSVFMLIIFGVALLLYSPTYSSNSAGVTDVSSYVERGDVPEHPSVDPSLWLKNPEKIPELGKTPAPTQRAIPDLTVVKDVPTARAKSLDVSPPARAERTDAAQDRKTSPASDTRESAESKGASKHARSDRASAKSPPATRTRAPLVAQRDARVRGASTQPAAPSVLFWVQAASLSSKLNAERARGVLAARHMKAEIFTKRTGAGLRHRVRVGPFTNRTEAEYWMKSIREIAEFSGCYVFQERVKN
SIO_010081: TPCCA_RS01470
subclass of: SO_0000673
so part of: TPCCA_RS01470
location: 308766..309539
location: region:308766-309539:1
so has part: feature:308766-309539:1:exon

WP_245522173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308766-309539:1:exon

TPCCA_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01475
old locus tag: TPCCA_0298
so part of: sequence
location: 309672..310703
location: region:309672-310703:1
so has part: feature:309672-310703:1:exon
subclass of: SO_0000010

position:309672:1
position: 309672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310703:1
position: 310703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309672-310703:1:exon

TPCCA_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01475
old locus tag: TPCCA_0298
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881747.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BMP family ABC transporter substrate-binding protein
translation: MNGAVRALSALIAVFTCFSCRPAVQDERAVRIAVFVPGFRHDSPVYAMLCDGVERAVTQERAAGRSIGLDIIEAGPNQALWREKLAHLAAEQRYRLIVSSNPALPHVLEPILRQFPLQRFLVLDAYAPQEHSLITFRYNQWEQAYLAGHLSALVSASAMRFANADKKIGLIAGQSYPVMTQTIIPAFLAGARAVDPAFEVDVRVVGNWYDAAKSADLARILFHEGVDVMMPICGGANQGVLAAARELGFYVSWFDDNGYARAPGYVVGSSVMEQERLAYEQTLRCIRGELPSAGAWTLGVKDGYVRFIEEDPLYLQTVPEPIRVRQSALLRRIQSGELTLPVR
SIO_010081: TPCCA_RS01475
subclass of: SO_0000673
so part of: TPCCA_RS01475
location: 309672..310703
location: region:309672-310703:1
so has part: feature:309672-310703:1:exon

WP_041610030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309672-310703:1:exon

TPCCA_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01480
old locus tag: TPCCA_0300
so part of: sequence
location: 310814..312460
location: region:310814-312460:1
so has part: feature:310814-312460:1:exon
subclass of: SO_0000010

position:310814:1
position: 310814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312460:1
position: 312460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310814-312460:1:exon

TPCCA_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01480
old locus tag: TPCCA_0300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505452.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MFGHPGRRAVDDAHTAHGPCSGARETDAAEHSVLSDVNLSFFTGEIHALLGKNGAGKSTLAHILSGFCVPTHGQLRLDGKEQRFSVPFDALRAGIGIVHQQPVFAERATVFENVVMGSAALTGVRWVRRAQVRERIDRIIAQWRMPLKKEEYVACLSADKRFFVSLLCVLFRNPRFIILDEPRCAPAQSRAVFFSHLEEFFVRSSHAPRCGGGVIVVTHRFADALRWAQRISLIEGGKACSFLRTDLLDEYCSAHQVNECIQKVSCALMSASTVTSSAVSSFSSLSDTQSCATVPRTSSARPWVLRVESLQVSKHADVPLTDISFSVAASAIIGIVGTPEDGVHVLEDILCGMHAGESRTHCTGNILLQEHDQVWCLPLQRNTPSLLRAHGVACVPSNCIQRGASMQLTLFDLLVPYTLRTWRTRVRTQIRFVARLLAEEEIYCDPLQPACTLSGGQLQRVILARELATRPRLLILAEPAEGLDSASEQRLLARLRQVAQAGTALVLLAREQHQAQWRALCTERFLLRAGTLCAEVSGTPSPSQDSHT
SIO_010081: TPCCA_RS01480
subclass of: SO_0000673
so part of: TPCCA_RS01480
location: 310814..312460
location: region:310814-312460:1
so has part: feature:310814-312460:1:exon

WP_245522174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310814-312460:1:exon

TPCCA_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01485
old locus tag: TPCCA_0301
so part of: sequence
location: 312457..313590
location: region:312457-313590:1
so has part: feature:312457-313590:1:exon
subclass of: SO_0000010

position:312457:1
position: 312457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313590:1
position: 313590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312457-313590:1:exon

TPCCA_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01485
old locus tag: TPCCA_0301
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944966.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MKRVINSCIAVLLGVAVMSAVIVLCSENPSVSLAAFFLKPFSTRGYIRALFHKAGLFVCMALGASCALKTGMINLGGDGQIYAAGFVTALLLREYWGVGFLLQWSVALLCALSVSGILACVSGILKAWLATSEMITSFLLSTACVPLIDALIITVTRDPAGNLLATAPVHSHFILQQQTSLFGVPAVLTYASLVALAVGCFFSYTRVGYQFRICGKAPEFGRFVGFPVWATYVWGMVLSGALFGLTGFFSVVGLFGTCYVGFSVGMGYAALAHALIAHARITVLVPLAFFFAWMETASEAAVLGAHLTVNVVLFLQAAIFLLISAQWSAPWNAVRRGARRVYRFLVTVFCFRGEKHRTRRRHALSVHDTHHRRSRWE
SIO_010081: TPCCA_RS01485
subclass of: SO_0000673
so part of: TPCCA_RS01485
location: 312457..313590
location: region:312457-313590:1
so has part: feature:312457-313590:1:exon

WP_013944966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312457-313590:1:exon

TPCCA_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01490
old locus tag: TPCCA_0302
so part of: sequence
location: 313581..314522
location: region:313581-314522:1
so has part: feature:313581-314522:1:exon
subclass of: SO_0000010

position:313581:1
position: 313581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314522:1
position: 314522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313581-314522:1:exon

TPCCA_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01490
old locus tag: TPCCA_0302
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881751.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MGVIGTTVIAILHRAAPLACAAAGALATEYAGVLGIFMEGVITFSSFCIAFFALVWGSYWGGLGITVCVVPLCLFFVAVGTERMRANPFLTGIAVHFSAMGMSAFGASSMFARAAASAMQMDTAAHGVSFTHVSLAHTRVLPHSLWGTAVAFALVWVFHLYLYSTNVGINFMHSGEDALALQVRGTDAARYRMVSWAVAGVCAVCAGGLLVLRVGTYTPQMAAGRGWTALAIVFLARKRMMWCVPAAIFFSGIEHMCDVLQGTHVVPTGVLFALPYILSLVVFVCTPRTSPCRRGERRRSRLLFAYLQRVTCA
SIO_010081: TPCCA_RS01490
subclass of: SO_0000673
so part of: TPCCA_RS01490
location: 313581..314522
location: region:313581-314522:1
so has part: feature:313581-314522:1:exon

WP_013944967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313581-314522:1:exon

TPCCA_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: mutL
locus tag: TPCCA_RS01495
old locus tag: TPCCA_0303
so part of: sequence
location: complement(314509..316455)
location: region:314509-316455:-1
so has part: feature:314509-316455:-1:exon
subclass of: SO_0000010

position:314509:-1
position: 314509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316455:-1
position: 316455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314509-316455:-1:exon

TPCCA_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: mutL
locus tag: TPCCA_RS01495
old locus tag: TPCCA_0303
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944968.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006298 - mismatch repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA mismatch repair endonuclease MutL
translation: MACAKRATGAALRQNAGAGCLRSGKGFSMHETSYKPIHRLSPDTAKKIAAGEVIERPASVVRELLENALDAGATKIHLEINAGGCALIRVSDNGHGMSPQDLLLCAEAHTTSKISSADDLLQLRTLGFRGEALASIAAVSRLHLTSTRSGPLAWHYQPKAAGTAAHVPSVPQGTEAGVLEPASLERGTVVRVEQLFENFPARKRFLGRQSAETTLCRSALIDVSLAHHPVEFRFTVDGTHKLTLLSQQTRKDRCLETQMLKGDPALFHTIEGGDCSFHFHLVLSEPAICRRERRGIFTFVNGRRIFDYGLVQALVLGSEGYFPNGTFPVACLFLTVNSERIDFNIHPAKKEVHLQDYAHIRHTLSRSVAHFYRQCTIAHYVRAEPAHAPATQGNAPTHSSPPCTGVREEPAAPCAHTPRYESLFPLPVQHAHLLPPSPPHISCEHARDCTHPAPAAEGDAPVHNHTHTGAFKVLGQVAGTFIAVERNNALYLIDQHAAHERIIFDTLQRNLGTAQILLIPYHIHPRSDEEARIMHRACTELSPAGFRFHEEPDGSWHVTAVPLHWRGSEEQLAHDILYSGKNAHDILRHVLATCACRSACKDGTILDDATLHSLVEQAFALPQSRCPHGRPIWIVIGRDELFKRIKRT
SIO_010081: TPCCA_RS01495
subclass of: SO_0000673
so part of: TPCCA_RS01495
location: complement(314509..316455)
location: region:314509-316455:-1
so has part: feature:314509-316455:-1:exon

WP_013944968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314509-316455:-1:exon

TPCCA_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01500
old locus tag: TPCCA_0304
so part of: sequence
location: complement(316468..319584)
location: region:316468-319584:-1
so has part: feature:316468-319584:-1:exon
subclass of: SO_0000010

position:316468:-1
position: 316468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319584:-1
position: 319584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316468-319584:-1:exon

TPCCA_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01500
old locus tag: TPCCA_0304
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342360.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAPAAIPLPSEETTPPVIKIKAGSIRHQCSVSMRFLKGSTLPLPCACRVDCPIGLHRTLLSNTMGPVNARAALALAMVFTFQRLCAEERFVISTEYFDIIYTEASTESARILAKHADRYEEQISLMLNRVPDKKKRTTVVLYAHTQDAGGSFSSKPSRKIIINDTRVPNLGLGSFKDSLLSIFYHELTHKISLDFFMPLLPPLFTEGVAVALESNDGTQGRLHDPLTMHYLIQNKLENVSPSWREVAELRYNYPHGMPYVYGGKFTEYLQKIYGKERCARPWQNSWRLFIRHRFWDVFQKDLGTAWNEFIDSIPIPEKVAQPQLLSEREAQGHYGARSAAPTGFAYYDRDRYAVRFRDKAGGVRTLFSHDNTLHHLSFSEDGRYLAVSDTIDTWSERTHRVRVFDTHSGSFSPEVYTGASEACFVGNGQKIVFVRVQGQYSRLTLKDRTDPTFEKVLYEAGPGLPFGALYAPAYAGDGTVAIIGARGMERNLLFIPVDDRPMTQVPREQMPHAMRELQSQKIKGSWTLTFSWANVNMLSRLGFYDVSRHTFRLMDQDVSGGVFAPVVYEALPAAVHEESAAEATIRGEEPVVRVAYTGRHRMHMSQYQRDDRALRERRVSLVPLHPAEAEEQSRPATLMVNGEFIADVHEADRGRPYRAAQWMWPPTFSPRFVPPNSFSLTDLGHTGLGVNMKFADPFGLVEVNLQSVSHFYPFFTSLGLKSSFYVGKTTYALRAYHEIDTGGFRYTKLGGAFETLTNFPMQDDRNAFFVRTAVGVDSYSCLCANGGGNGNCCGNNGGQQCCACNGQGANGPHYYKSLESPFIQAQVEMGYSFSQRAERTGTNWFVADVTGVSLKLHVANSFDTGKTEDAVLVQTKGSFRLPVVPLRVGVSAYVGYNAGWRGGKGNILAKHPVYGFPGPTYLPKLAGVDDKEGSCNKSKSAGFGAEAVLTILDYDISIYDPYLPVFYRNIVWNVSCEYVLNAPDFSSPKHLCVASTSLVLEFDLADVKVRAGVQYGFQLAETQSAKTPGFSTIFSMAS
SIO_010081: TPCCA_RS01500
subclass of: SO_0000673
so part of: TPCCA_RS01500
location: complement(316468..319584)
location: region:316468-319584:-1
so has part: feature:316468-319584:-1:exon

WP_013944969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316468-319584:-1:exon

TPCCA_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01505
old locus tag: TPCCA_0305
so part of: sequence
location: 319511..321244
location: region:319511-321244:1
so has part: feature:319511-321244:1:exon
subclass of: SO_0000010

position:319511:1
position: 319511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321244:1
position: 321244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319511-321244:1:exon

TPCCA_RS01505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01505
old locus tag: TPCCA_0305
EC number: 6.3.4.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881754.1
GO function: GO:0003883 - CTP synthase activity [Evidence IEA]
GO process: GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CTP synthase
translation: MDPAFIFITGGVVSSLGKGIAAGAIGLLLKSRGISVVNQKFDPYLNGDPGTMNPYQHGEVFVTQDGGETDLDLGHYERFTDVPSSRFNSTTAGSVYRAILDRERAGGYGGATVQVIPHVTDEIQARIRAAAAITGARVVITEIGGTVGDIESLPFIEAIRQIRRVLGKERCLFIHLGLVPYLPSCGEMKTKPLQHSVKELLGLGVQPDVILCRSERHITDAVREKLSLFCNVERRAIVENVTTRSIYEVPLLLEAEGLGALLCERLRLFDTCCGGQVARNLGAGGAQSAVLGAGGTVRTDGGLHPAAGQGAEPDLTAWRAMVRALYYPQRELTVALVGKYVSLADAYLSVSEALTAAGICHRARVDMRWIDAEEICSVQDAAHALADADALVIPGGFGVRGIEGMICAVSHARVQNLPYLGICLGMQIAVIEFARNVLLLASAHSREFAIDTPHPVVDLLPGCVDTPTGGSLRLGQYRCLLAEGSRARALYGRGEVWERHRHRYGLNAAYRARFEASALRPVGVDSDCGAVEVVEHGEHPWFFGVQFHPEFCSRPNRAHPLFRALVAAGLERKDSRS
SIO_010081: TPCCA_RS01505
subclass of: SO_0000673
so part of: TPCCA_RS01505
location: 319511..321244
location: region:319511-321244:1
so has part: feature:319511-321244:1:exon

WP_013944970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319511-321244:1:exon

TPCCA_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpsD
locus tag: TPCCA_RS01510
old locus tag: TPCCA_0306
so part of: sequence
location: 321409..322023
location: region:321409-322023:1
so has part: feature:321409-322023:1:exon
subclass of: SO_0000010

position:321409:1
position: 321409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322023:1
position: 322023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321409-322023:1:exon

TPCCA_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpsD
locus tag: TPCCA_RS01510
old locus tag: TPCCA_0306
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881755.1
GO component: GO:0015935 - small ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S4
translation: MAVKRARGKIVRRLGINIFGNPKYTRLLGKKPAPPGKEHGVKQRAKVSVYGEQLKEKQKFRFAYGMSERQFRNLFAQAHRMKGVTGNNMLSLMERRLDNTVFRMGFAISRVQARQMVSHRYFLINGKTANIPSMRISAHDVITTKNRRGIHSIIRHNLTLSQGQRGSWLNVDEEQLSATVSELPRAQDIHPVGNIQHIVEYYSR
SIO_010081: TPCCA_RS01510
subclass of: SO_0000673
so part of: TPCCA_RS01510
location: 321409..322023
location: region:321409-322023:1
so has part: feature:321409-322023:1:exon

WP_013944971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321409-322023:1:exon

TPCCA_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01515
old locus tag: TPCCA_0307
so part of: sequence
location: 322109..323137
location: region:322109-323137:1
so has part: feature:322109-323137:1:exon
subclass of: SO_0000010

position:322109:1
position: 322109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323137:1
position: 323137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322109-323137:1:exon

TPCCA_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01515
old locus tag: TPCCA_0307
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881756.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PASTA domain-containing protein
translation: MDDGPLRVVVLTSFVILVVVCAVALCTFFVFLKSPDQVMTPHIVGKDFVSAAIEMQAKELYPRVQLRFSTREKPGVVLEQNPPAGAIVKAGRYVDLVVSQQAVTTHVEDYRGLQVEEAVARIAAAEVERRISVKTPHLYRFSTGAAGTILEQDPAPGAVLSADVELRFVVSKGSEREQTTVPLLVGYSLPELYRVMAQTALTLQFTVSPPSPSGERKDGEASGRTRANAQDYARVSAQDHDPGSRVEAFRAMQVQVLFPERGEAHEIYGILALDLPRYPYPMSCVLDVQYPGGVRTALAMFQHPGGRFTIPYGLPAGTTLFLTVGGKELFSGEVGALPHAGS
SIO_010081: TPCCA_RS01515
subclass of: SO_0000673
so part of: TPCCA_RS01515
location: 322109..323137
location: region:322109-323137:1
so has part: feature:322109-323137:1:exon

WP_193386056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322109-323137:1:exon

TPCCA_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01520
old locus tag: TPCCA_0308
so part of: sequence
location: 323181..324077
location: region:323181-324077:1
so has part: feature:323181-324077:1:exon
subclass of: SO_0000010

position:323181:1
position: 323181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324077:1
position: 324077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323181-324077:1:exon

TPCCA_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01520
old locus tag: TPCCA_0308
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505457.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MVWRSVCCALLVALLCLAVGCDSPDLLVDSDLSLSRVRVAKTLVMGVSDRTPPMCFRYPNGEIVGFDVDLARAVCRVLGVRLIIRPIKWTLKRNALRCGLVDCVWTAFAVTARRRTEFLLSEPYLRTAQVLLVREGRLHPDLAHVERELGQRMTGVSAVHMRGDILPMRSSHKQARIAVLRGGPVPGNEKWQFGFEPHGKIVWYRHRSAMLEALRTRAVDAALVDLVEAHDAVHRQGAPLRVMRVPLGLSQYAVAFRREDRALRDEIQRILYRIAASGEAYRIAEKWFGVGQSVIGIE
SIO_010081: TPCCA_RS01520
subclass of: SO_0000673
so part of: TPCCA_RS01520
location: 323181..324077
location: region:323181-324077:1
so has part: feature:323181-324077:1:exon

WP_245522175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323181-324077:1:exon

TPCCA_RS05615
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05615
old locus tag: TPCCA_0308a
so part of: sequence
location: 324143..324361
location: region:324143-324361:1
so has part: feature:324143-324361:1:exon
subclass of: SO_0000010

position:324143:1
position: 324143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324361:1
position: 324361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324143-324361:1:exon

TPCCA_RS05615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05615
old locus tag: TPCCA_0308a
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLWSCTPRARVFHAQDASFDEARVRGTLVVGVGRGLAPLVDAATFSAFSLPSSVVPPPARCSLLLQEARLRC
SIO_010081: TPCCA_RS05615
subclass of: SO_0000673
so part of: TPCCA_RS05615
location: 324143..324361
location: region:324143-324361:1
so has part: feature:324143-324361:1:exon

WP_245522176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324143-324361:1:exon

TPCCA_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01525
old locus tag: TPCCA_0309
so part of: sequence
location: 324375..324959
location: region:324375-324959:1
so has part: feature:324375-324959:1:exon
subclass of: SO_0000010

position:324375:1
position: 324375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324959:1
position: 324959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324375-324959:1:exon

TPCCA_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01525
old locus tag: TPCCA_0309
inference: COORDINATES: protein motif:HMM:NF012707.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transporter substrate-binding domain-containing protein
translation: MARRLHMDVQVKVVHWDEKERALHAGVIDCIADGFTHTADHARRFALTQPYVRDVRVFAVLRQAPYATVADLHGKRLGVHAVTDVEENDAYHALFGQVKTYAHYVQALTALSRAEVDVVALNLVTLCAVTPHLRRLYRILDEPIDTCEYVFAFRADARALRDMVVRTLSQLQREGFVSALSKRWFGSDMSIIDR
SIO_010081: TPCCA_RS01525
subclass of: SO_0000673
so part of: TPCCA_RS01525
location: 324375..324959
location: region:324375-324959:1
so has part: feature:324375-324959:1:exon

WP_245522177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324375-324959:1:exon

TPCCA_RS01530
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01530
old locus tag: TPCCA_0310
so part of: sequence
location: 324982..325344
location: region:324982-325344:1
so has part: feature:324982-325344:1:exon
subclass of: SO_0000010

position:324982:1
position: 324982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325344:1
position: 325344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324982-325344:1:exon

TPCCA_RS01530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01530
old locus tag: TPCCA_0310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460537.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MDPLNAVIVEGNVVPSASARAPEAAVCAFCIQTQRRVQGEKRVHTEVSYFEVEAWDALARVCAQQVRPGVGLRVVGRLKQDRWQQEDGVRVQRVKIVAEHVEFQTPFCMVRVCCACDGRG
SIO_010081: TPCCA_RS01530
subclass of: SO_0000673
so part of: TPCCA_RS01530
location: 324982..325344
location: region:324982-325344:1
so has part: feature:324982-325344:1:exon

WP_013944976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324982-325344:1:exon

TPCCA_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01535
old locus tag: TPCCA_0312
so part of: sequence
location: 325417..326430
location: region:325417-326430:1
so has part: feature:325417-326430:1:exon
subclass of: SO_0000010

position:325417:1
position: 325417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326430:1
position: 326430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325417-326430:1:exon

TPCCA_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01535
old locus tag: TPCCA_0312
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881761.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF368 domain-containing protein
translation: MSSPVMHVWIGMLIGAANVVPGLSGGTVALLCGTWELLIAAIALDRAHLCRQWRRLLALAGGVVVGIGVCARFMRALYEAFPHLTNAFLAGVLLASVPSLRNRVRAASVAAEHSVQAEGTARGHVGDAARRVWCAVRIIFFVLLGFVAVCAFSRMQHARDASSAAAPASVQTTAVLTTAHTRGFVATVCAGALAAAAMLTPGFSGSLVLLLAGVYQPLLSVLSLRAVEQGGGVTGASVISRLCSAHVWGILFPLCVGMGIGLLGAARVLRAWFRLYPVSAHACVCGLVLGSSVTLFPRGTAAGMQEQFTLFMGCVAGCVGAFALAKVCAWGARDARG
SIO_010081: TPCCA_RS01535
subclass of: SO_0000673
so part of: TPCCA_RS01535
location: 325417..326430
location: region:325417-326430:1
so has part: feature:325417-326430:1:exon

WP_013944977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325417-326430:1:exon

TPCCA_RS05705
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05705
old locus tag: TPCCA_0313
pseudo: true
so part of: sequence
location: 326519..328790
location: region:326519-328790:1
so has part: feature:326519-328790:1:exon
subclass of: SO_0000010

position:326519:1
position: 326519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328790:1
position: 328790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326519-328790:1:exon

TPCCA_RS05705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05705
old locus tag: TPCCA_0313
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460538.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: major outer sheath N-terminal domain-containing protein
SIO_010081: TPCCA_RS05705
subclass of: SO_0000673
so part of: TPCCA_RS05705
location: 326519..328790
location: region:326519-328790:1
so has part: feature:326519-328790:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:326519-328790:1:exon

TPCCA_RS05710
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05710
old locus tag: TPCCA_0313a
so part of: sequence
location: complement(328849..329166)
location: region:328849-329166:-1
so has part: feature:328849-329166:-1:exon
subclass of: SO_0000010

position:328849:-1
position: 328849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329166:-1
position: 329166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328849-329166:-1:exon

TPCCA_RS05710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05710
old locus tag: TPCCA_0313a
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010882063.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2715 domain-containing protein
translation: MYDSYLTIQVLNGGSVCSFEHKGWYVPKTVLGLLTHQKDEGAICEKSSLEGICQNYAVPVQLGVQHYFGAHWGIDATATVSFGVDTKLAKFRIPYTLRIGPVFRT
SIO_010081: TPCCA_RS05710
subclass of: SO_0000673
so part of: TPCCA_RS05710
location: complement(328849..329166)
location: region:328849-329166:-1
so has part: feature:328849-329166:-1:exon

WP_275450012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328849-329166:-1:exon

TPCCA_RS05715
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05715
old locus tag: TPCCA_0315
so part of: sequence
location: complement(329210..329554)
location: region:329210-329554:-1
so has part: feature:329210-329554:-1:exon
subclass of: SO_0000010

position:329210:-1
position: 329210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329554:-1
position: 329554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329210-329554:-1:exon

TPCCA_RS05715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05715
old locus tag: TPCCA_0315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010882064.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2715 domain-containing protein
translation: MGRRSVWGVLMFGCMLPGMAARITVSPKLGAYGDARGGPDLWGLCIEAPSWYLSDTGKEYLPPRYAPETPLVGLDVAFRAENGFLLQVTVDAALTRLMFRGQCLAGYSFRPGGG
SIO_010081: TPCCA_RS05715
subclass of: SO_0000673
so part of: TPCCA_RS05715
location: complement(329210..329554)
location: region:329210-329554:-1
so has part: feature:329210-329554:-1:exon

WP_013944979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329210-329554:-1:exon

TPCCA_RS05480
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05480
old locus tag: TPCCA_0316
pseudo: true
so part of: sequence
location: complement(329624..331487)
location: region:329624-331487:-1
so has part: feature:329624-331487:-1:exon
subclass of: SO_0000010

position:329624:-1
position: 329624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331487:-1
position: 331487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329624-331487:-1:exon

TPCCA_RS05480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05480
old locus tag: TPCCA_0316
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881762.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: major outer sheath N-terminal domain-containing protein
SIO_010081: TPCCA_RS05480
subclass of: SO_0000673
so part of: TPCCA_RS05480
location: complement(329624..331487)
location: region:329624-331487:-1
so has part: feature:329624-331487:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329624-331487:-1:exon

TPCCA_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01560
old locus tag: TPCCA_0319
so part of: sequence
location: 331645..332706
location: region:331645-332706:1
so has part: feature:331645-332706:1:exon
subclass of: SO_0000010

position:331645:1
position: 331645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332706:1
position: 332706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331645-332706:1:exon

TPCCA_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01560
old locus tag: TPCCA_0319
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460539.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BMP family protein
translation: MGEKWVRAFAGVFCAMLLIGCSKSDRPQMGNAGGTEGGDFVVGMVTDSGDIDDKSFNQQAWEGISRFAQENNAKCKYVTALTDAEYVPSLSAFADENMGLVVACGSFLVEAVIETSDRFPKQKFLVIDAVVQDRDNVVSAVFGQNEGSFLVGVAAALKAKEAGKSAVGFIVGMELGMMPLFEAGFEAGVKAVDPDIQVVVEVANTFSDPQKGQALAAKLYDSGVNVIFQAAGGTGNGVIKEARDRRLNGQDVWVIGVDRDQYMDGVFDGSKSVVLTSMVKRADVAAERISKMAYDGSFPGGQSIMFGLEDKAVGIPEENPNLSSAVMEKIRSFEEKIVSKEIVVPVRSARMMN
SIO_010081: TPCCA_RS01560
subclass of: SO_0000673
so part of: TPCCA_RS01560
location: 331645..332706
location: region:331645-332706:1
so has part: feature:331645-332706:1:exon

WP_013944982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331645-332706:1:exon

TPCCA_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01565
old locus tag: TPCCA_0321
so part of: sequence
location: 332947..334548
location: region:332947-334548:1
so has part: feature:332947-334548:1:exon
subclass of: SO_0000010

position:332947:1
position: 332947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334548:1
position: 334548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332947-334548:1:exon

TPCCA_RS01565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01565
old locus tag: TPCCA_0321
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881769.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MPYAVEMRDVTVQFPGVVANDRVSFGVQTAEVHALLGENGAGKSTLMGVLFGTCPKQSGELFVDGRSVCIRSPRDAARHGIGMVHQHFNLVHNLTVSENIVLGVEPRARFARTDVRAAHRAVGELCERYGLAVDPYAKIQDITVGMQQRVEILKMLYRDARVLIFDEPTAVLAPQEVQQLMQVIRRLAREGKAVVLITHKLSEIKAIADRCTVLRRGACIGTVSVAEVGEEQLVEMMVGHAVDYALPRASRKDGACVLEVRSLSVGARRVTSGQMSADASPSAAPRAYGVRAVSFQVRCGEILCITGVDGNGQSQLLEAIAGLVPVSEGQILLDGCEIQRTSVRERVLRGVSYIPEDRRKHGLVLDFSVEENMVLRSYFRAPFARRGILDRRVIAQHAHALAKKFEVQSGALGCAVRARALSGGNQQKIIIARELHRAPRLLIAAQPTRGLDLGAVQYVHRAIVAERNRGGAVLLFSLDMDEVLALADSIAVMYEGEIVGTVHACDATEQELGRLMSGMRKKETAGKKTGVQG
SIO_010081: TPCCA_RS01565
subclass of: SO_0000673
so part of: TPCCA_RS01565
location: 332947..334548
location: region:332947-334548:1
so has part: feature:332947-334548:1:exon

WP_013944984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332947-334548:1:exon

TPCCA_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01570
old locus tag: TPCCA_0322
so part of: sequence
location: 334614..335660
location: region:334614-335660:1
so has part: feature:334614-335660:1:exon
subclass of: SO_0000010

position:334614:1
position: 334614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335660:1
position: 335660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334614-335660:1:exon

TPCCA_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01570
old locus tag: TPCCA_0322
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505461.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MILGFAVGAVVMAVSGLHPKYILIALVRSMFGVNVQAFGTGRSVWNFRYMGEGVVTCLPLILTGLAVAFTSHMGLFNIGAEGQLVVGSVCAVCVGVLWHEHLSFFTIPAAVLAGMVGGGLWGLIPGVLRAVCGISEVVVTIMLNYVGLYGANFVVTALPGSDLMRTVSLPPAATLHSDFLSRVSNGSRLHWGFLLVIAALVSFKFLIEKTTFGYELRVVGASAEAARYAGIHVRRRVMLATSISGMYAGLAGVLLAIGTFSYGRVLPGFEGYGFEGIVVSLVGRNTAWGCVFGGSLLGSLRAAGPLMQLNGVPKEVSVIIVSAIIVFLSMHNGIRAMLVRWGRQGARV
SIO_010081: TPCCA_RS01570
subclass of: SO_0000673
so part of: TPCCA_RS01570
location: 334614..335660
location: region:334614-335660:1
so has part: feature:334614-335660:1:exon

WP_245522210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334614-335660:1:exon

TPCCA_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01575
old locus tag: TPCCA_0323
so part of: sequence
location: 335657..336607
location: region:335657-336607:1
so has part: feature:335657-336607:1:exon
subclass of: SO_0000010

position:335657:1
position: 335657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336607:1
position: 336607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335657-336607:1:exon

TPCCA_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01575
old locus tag: TPCCA_0323
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944986.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MNTFYSMVALTLVFSTPILITALGGLFSERSGVINIALEGLMMFGAFSTATVTVLCEPYTTAAPWIALGVGMAVAASVALFYAYLSVRLCSDQIIAGTAINLCATGMTVFFAQVIFGQQGTQAYSRGLVKTSYGFFSRIPVLGPMFFTHTYPTVYLGFVLVALAWYVLYRTPFGVHVRATGDQPYAVDGAGLSVFRLRSAAVVISGLCAGLGGGVLILTQDIQYTVYSTHGTGFIALAALISGRWHPFGVLVTSVLFGFSQILNVYATSVELLKHLPIELFSALPYALTVVVLLLFGGRGEAPRAIGQPYDRARRY
SIO_010081: TPCCA_RS01575
subclass of: SO_0000673
so part of: TPCCA_RS01575
location: 335657..336607
location: region:335657-336607:1
so has part: feature:335657-336607:1:exon

WP_013944986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335657-336607:1:exon

TPCCA_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01580
old locus tag: TPCCA_0324
so part of: sequence
location: 336711..341117
location: region:336711-341117:1
so has part: feature:336711-341117:1:exon
subclass of: SO_0000010

position:336711:1
position: 336711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341117:1
position: 341117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336711-341117:1:exon

TPCCA_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01580
old locus tag: TPCCA_0324
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015613211.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translocation/assembly module TamB domain-containing protein
translation: MAVLPSVRRFECSLFVVLVLCALAVFDPLSGFVQQKLAGVQRVWLGLVEEYSGLRFQYDSLSPSVLRAVTLRNVRVREAVRGEQVAVFSKIVVAYNIFSLFGSNPVRGIWALHVHDGAVDVDLYRHRHVKEKLQKLFSKDGEMASFFADLREIDVRVHNTAVTVRSDSRRAHLSVPQGRFSFAETGASFALSCEAEYVDTRSSSWGPLYTHLDASGVFETSFTSGSATLELAPPSGSFFSVPTLTLVAIYADDLFKFHTARGIYPMEVSGQWNTATGACEASVRCENFRPLKWARLRDTHVPAQGMQELSVSGNVQVGYTPIEQWRWSADVHAHTPYVVLAPGYQLEDVVATLQAHGDPARIQVEKICARGSNLDVDGAFELTLDRWIPSGVLTVHRLPLLSGAYLSAQVRFRPQGVGFVCTVPRIQVGEAFLEDVALSVRVDSAKTDFRLVAADSTGRYECDGSYLAANAGQSRFLEAHVAFESVNVGALYQMVAACTSPQGASTLVTRALVPLQSTADFYVSSDFRDISYNCVRLVLSSDEIADLYALLSVQGTAASFSVTDISLLCKGLEVQGNVMANFEHGGDALFESVLSINSVPYRTRGVYADRTLTVYGDYDFSVVASFDERAGVTGTFQVQNLPVPLSQCLFDCDSSFAMRSAHSWEVRFHHLHLRSGAVAAGGSEQIETVLRLAGVANQAGALFDQVFFGSRDRYLAGTASFAVVPRTGQHEQARYETAVRLASEDAQEQVQLNAQVTVGEHVYVDSSGRIDNVDVGRFVAGQGERSRVTGSWTVLGTMQDMSGQVQVDSLELIAKGVPFHLRGGCALDDGTLALLPTQVTWGSHQFADLAGEWVPGQARAWVRTTYSGAFEGQPTHATCTLTLAGSPVDSGKATSAPRTSFLTPFLQTHSQYTISAEFEHWRIATYEGEKNRILVVRDPGVWALYAGEHDEITGFMLDDGSVSLQVAQSLPVHFFLNGSLSAQQVDVQIQDIFVDLARVWAFTGIRHVRVHEGVAVGNVTVSGTRARPVFEGKLRGKEVVASAPGYAPERFGPGSIDIGVHGSTLIVPYTEFPGPTARLWGECVAQLNGFYPDEVVIKCGTVGDALGAIQTDNLLFAMDGSAGCDLELRITPQLLSINGKARFDRGYFLLNFSGIEEFYTKYADSAQNFQMNLLLSAGNKVEFRWPRSDFPILRTLLHAQEPFEFIADPVSGSFYVRGFAHLKGGEFFWIKRKFYLREGTIHFARDTQTADPRISFRAELKDRDTQGRPVSLILSAEDQVFSKLAPKLRCDPPVSEQELAKILGQVVLGDLTEENIEQNVASIASDILMQWGIMKRVEDKIRSFLDLDAFSFRTYVLQNAIFGNLFNKDRSKPLTVGNYFDNTSLYVGRRLGRAVYADALLHLSQYDPLAPNNLGIKKPAAGSLLFRPELGLEFATPFFSLRWASTPTRLDSLFVSDTSMRVSWSFAY
SIO_010081: TPCCA_RS01580
subclass of: SO_0000673
so part of: TPCCA_RS01580
location: 336711..341117
location: region:336711-341117:1
so has part: feature:336711-341117:1:exon

WP_013944987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336711-341117:1:exon

TPCCA_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: bamA
locus tag: TPCCA_RS01585
old locus tag: TPCCA_0326
so part of: sequence
location: 341147..343630
location: region:341147-343630:1
so has part: feature:341147-343630:1:exon
subclass of: SO_0000010

position:341147:1
position: 341147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343630:1
position: 343630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341147-343630:1:exon

TPCCA_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: bamA
locus tag: TPCCA_RS01585
old locus tag: TPCCA_0326
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014343537.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor BamA
translation: MLKKASAFLIASCCVMSLARAQANDNWYEGKPISAISFEGLEYIARGQLDTIFSQYKGQKWTYELYLEILQKVYDLEYFSEVSPKAVPTDPEYQYVMLQFTVKERPSVKGIKMVGNSQIRSGDLLSKILLKKGDIYNEVKMKVDQESLRRHYLDQGYAAVKISCEAKTEAGGVVVQFTIQEGKQTVVSRIQFKGNKAFTESVLKKVLSTQEARFLTSGVFKENALEADKAAIHSYYAERGYIDARVEGVAKTVDKKTDASRNLVTLTYTVVEGEQYRYDGVTIVGNQIFSTEELQAKIRLKRGAIMNMVAFEQGFQALADAYFENGYTSNYLNKEEHRDTAAKTLSFKITVVERERSHVEHIIIKGTKNTKDEVILREMLLKPGDVFSKSKFTDSLRNLFNLRYFSSLVPDVRPGSEQDLVDIILNVEEQSTANVQFGVTFSGVGEAGTFPLSLFCQWEEKNFLGKGNEISVNATLGSEAQSLKLGYVERWFLGSPLTVGFDFELTHKNLFVYRAGSYGNGLPHPYVCIQQWTSSPGLAEAFRLKYSRFESAIGAHTGYQWYPRYAVIRVNGGVDFRVVKNFYDYENNAPFDLTVKEQLNWTSINSFWTSVSFDGRDFAYDPSSGWFLGQRCTFNGLVPFLEKEHSFRSDTKAEFYVTLLNYPVSAVWNLKFVLAFYTGVSVQTYYGLRKGKDGRNNGVRSGALVIDGVLVGRGWSEDAKKNTGDLLLHHWIEFRWPLAHGIVSFDFFFDAAMVYNIESESPNGNSTSGSSSGREGPYKMSYGPGLRFTLPQFPLKLAFANTFTSEGGIPKTKKNWNFVLSFTVNNL
SIO_010081: TPCCA_RS01585
subclass of: SO_0000673
so part of: TPCCA_RS01585
location: 341147..343630
location: region:341147-343630:1
so has part: feature:341147-343630:1:exon

WP_013944988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341147-343630:1:exon

TPCCA_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01590
old locus tag: TPCCA_0327
so part of: sequence
location: 343687..344205
location: region:343687-344205:1
so has part: feature:343687-344205:1:exon
subclass of: SO_0000010

position:343687:1
position: 343687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344205:1
position: 344205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343687-344205:1:exon

TPCCA_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01590
old locus tag: TPCCA_0327
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944989.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpH family outer membrane protein
translation: MKAALTFVFMLLTSLLQGQSQHITRFAVIDAARIYSTFWRDSRVLRDYESKKARHQGEIQKMSDELVELRQKKVDAQMQQNIASVQKYEVLIASKTALLLEYSKTSNDELTALRKTLIADDAFYAKLYAAIRRIAESEGYSIVLDLQKNAGILWYSHSVDITEDVLRELSSS
SIO_010081: TPCCA_RS01590
subclass of: SO_0000673
so part of: TPCCA_RS01590
location: 343687..344205
location: region:343687-344205:1
so has part: feature:343687-344205:1:exon

WP_013944989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343687-344205:1:exon

TPCCA_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: mutS
locus tag: TPCCA_RS01595
old locus tag: TPCCA_0328
so part of: sequence
location: 344261..346963
location: region:344261-346963:1
so has part: feature:344261-346963:1:exon
subclass of: SO_0000010

position:344261:1
position: 344261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346963:1
position: 346963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344261-346963:1:exon

TPCCA_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: mutS
locus tag: TPCCA_RS01595
old locus tag: TPCCA_0328
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881776.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO process: GO:0006298 - mismatch repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA mismatch repair protein MutS
translation: MRSLASDTPLMRQYHAIRAQHPDAVLFFRLGDFYEMFDSDALHVSTLLGLTLTKRNGTPMCGVPVHTARTHIARLLKHGKKVALCEQVSHPVPGELTQRKVIEIISPGTAVEDDFLSQGFSQYLATVCASDATVAFSYLEVSTGAFFITSFPRAEAADALQKEFGRVQPSEVLLSASVLRSLPELAAILSLYPRLVRTTGADALFNPEHTKNRLHHCFRTRNLDCLTLLPHSPDLAAAGALIAYLEETTRHPLSHVSAITRYHIHDFVEIDDATRKNLEILQNLHDSTHAHSLFETLNYTHTAMGTRLLRYWLHHPLRSQEEIQKRLSAVVFFHHRPHILKALRATLSCVRDVERLVARVALEKAHGRDLLALKESLRAILTFRSLERESPFPPDLLPSEGDTPVLQELYGLLEQSIKEDCPVTLSDGNLIKRGFSASLDELHHVRDNANEILKQYLAEERERTGIGTLKMKYNRMLGHFLEVSKGHLSAVPAHFIRRRSLSNADRFTTEQLSELEAKLARAREGLVSFEQELFADIRRTVCSHTQLLRTNAARVAQLDVLQSFAHAALQHGWSQPVFIKDGALRITGGRHPVVELHLPSGEFVPNDLTLSSSEHAVLPRFALITGPNMAGKSTFLRQTALICLIAQVGSFVPAEKAELTPVDRIFCRVGAADNLARGESTFLVEMSETAHILRAATRDSLVIMDEVGRGTATEDGLSIAQAVSEYLLHHVRAKTLFATHYHELSRLAHPRLEHLKLDVLETDNTIVFLKKVTPGSCGSSYGIYVARLAGLPESVLARACELLKQLQQRAGSAPRASAAHAADAVAQTEAVHAHKAASEPCAQRVSADLFTQEELIGAEIASLNPDAITPLEALTLIARWKRSLRGSATQQSSAMTKRKG
SIO_010081: TPCCA_RS01595
subclass of: SO_0000673
so part of: TPCCA_RS01595
location: 344261..346963
location: region:344261-346963:1
so has part: feature:344261-346963:1:exon

WP_013944990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344261-346963:1:exon

TPCCA_RS05250
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05250
old locus tag: TPCCA_0329
so part of: sequence
location: 347081..348622
location: region:347081-348622:1
so has part: feature:347081-348622:1:exon
subclass of: SO_0000010

position:347081:1
position: 347081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348622:1
position: 348622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347081-348622:1:exon

TPCCA_RS05250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05250
old locus tag: TPCCA_0329
EC number: 2.1.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342373.1
GO function: GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]
GO process: GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]; GO:0035999 - tetrahydrofolate interconversion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine hydroxymethyltransferase
translation: MNNSALRAYLSTRAPDQIHSAFVAYLANLDLVAHQFPQIASDIVQELIDQRSYVKLIASENYSSLAVQAAMANLLTDKYAEGFPHHRYYGGCQNVDSIESAAAAEACALFGAEHAYVQPHSGADANLVAFWAILSRQIEIPTLSSLGVTAATHLSEEQWEVLRQKMGNQKLMGLDYFSGGHLTHGYRQNVSGRMFRVVSYAVDRDTGLLDYAAIEAQAKRERPLILLAGYSAYPRSINFRIFREIADKVGAVLMADMAHFAGLVAGGVFTGDEDPVRWSHIVTSTTHKTLRGPRGAFILCKKEFAEAVDKGCPLVLGGPLPHVMAAKAVAFREARHAAFKTYAHAVRDNARALADACIQQGMQLQTGGTDNHLLLLDVRPFGLTGRQAERALIDCGVTLNRNSLPFDPNGAWLTSGLRIGTPAVTSLGMGPEEMKRIARLIARVLGAATPVRTKTGALSKSAAEVPGEVRSSVCSEVRELLARFTLYPELDEPFLRAHFTRRPADKTPADEGT
SIO_010081: TPCCA_RS05250
subclass of: SO_0000673
so part of: TPCCA_RS05250
location: 347081..348622
location: region:347081-348622:1
so has part: feature:347081-348622:1:exon

WP_013944991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347081-348622:1:exon

TPCCA_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01610
old locus tag: TPCCA_t0016
so part of: sequence
location: complement(348604..348686)
location: region:348604-348686:-1
so has part: feature:348604-348686:-1:exon
subclass of: SO_0000663

position:348604:-1
position: 348604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348686:-1
position: 348686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348604-348686:-1:exon

TPCCA_RS01610
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS01610
old locus tag: TPCCA_t0016
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(348650..348652),aa:Leu,seq:caa)
SIO_010081: TPCCA_RS01610
subclass of: SO_0000673
so part of: TPCCA_RS01610
location: complement(348604..348686)
location: region:348604-348686:-1
so has part: feature:348604-348686:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:348604-348686:-1:exon

TPCCA_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01615
old locus tag: TPCCA_0330
so part of: sequence
location: complement(348778..350574)
location: region:348778-350574:-1
so has part: feature:348778-350574:-1:exon
subclass of: SO_0000010

position:348778:-1
position: 348778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350574:-1
position: 350574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348778-350574:-1:exon

TPCCA_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01615
old locus tag: TPCCA_0330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460541.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein
translation: MHSGQQLLEKNSIIISGLPPWAQELSKKYCSKTVNLYFVHGNIRDFLPHRDIQGSFSFVRINDYISEVIFGNRDIIVFYDKSAGITFCLQEMLSAYLERMHAQYPTEALADFLSRDPVKAFAYLERYFIMNMKQNKRMVLIIDYSESLVPSEDIANLSETDRYCFVTLNRWANDPVFTNEDISVVMLTENITDINSRFTASPSTVKIHIPLPNEETRIRFLEYLKTQEEILVLERGLNTEKIGKLTSGLNLVNLHQLAAETYQTIDANGKPEDNISRLSHTDSATLQFLKRKKQEIIEHEAGGLLEFVDTSCDLSYVAGNAFVKKRLYNAVRAIKQGRADVLPMGYLISGPIGTGKSFMVSAFAGEIGIPMVRLCNFQATQPGITQSNLEKTFNILKALTPVAVMVDEADAVFGRRNAPAGESRIFAQIAGFMGNTQHRGNIIWFLITSRPDLLPIDLKRQGRAEEHLALFYPETTKEKTEIFEALKKKLRIKLKDVHVPAIIRRIKFAVSGSDLEAILVRAQLTAAMESRTMVTTQDITRTIEDFIPPAYPHEIELQNLVAVLECTGKEMLPARYQHLDRSKLVADIRELKLLMGEK
SIO_010081: TPCCA_RS01615
subclass of: SO_0000673
so part of: TPCCA_RS01615
location: complement(348778..350574)
location: region:348778-350574:-1
so has part: feature:348778-350574:-1:exon

WP_013944992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348778-350574:-1:exon

TPCCA_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01620
old locus tag: TPCCA_t0017
so part of: sequence
location: complement(350639..350710)
location: region:350639-350710:-1
so has part: feature:350639-350710:-1:exon
subclass of: SO_0000663

position:350639:-1
position: 350639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350710:-1
position: 350710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350639-350710:-1:exon

TPCCA_RS01620
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS01620
old locus tag: TPCCA_t0017
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(350675..350677),aa:Gly,seq:tcc)
SIO_010081: TPCCA_RS01620
subclass of: SO_0000673
so part of: TPCCA_RS01620
location: complement(350639..350710)
location: region:350639-350710:-1
so has part: feature:350639-350710:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:350639-350710:-1:exon

TPCCA_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: gnd
locus tag: TPCCA_RS01625
old locus tag: TPCCA_0331
so part of: sequence
location: complement(350804..352270)
location: region:350804-352270:-1
so has part: feature:350804-352270:-1:exon
subclass of: SO_0000010

position:350804:-1
position: 350804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352270:-1
position: 352270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350804-352270:-1:exon

TPCCA_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: gnd
locus tag: TPCCA_RS01625
old locus tag: TPCCA_0331
EC number: 1.1.1.44
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944993.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
GO process: GO:0006098 - pentose-phosphate shunt [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase
translation: MGADIGFIGLAVMGENLVLNIERNGFSVAVFNRTTTVVDRFLAGRAHGKRITGAHSIAELVSLLARPRKIMLMVKAGSAVDAVIDQILPLLEKGDLIIDGGNSYYQDTIRRMRALEAAGIHFIGTGVSGGEEGALRGPSLMPGGSAQAWPLVSSIFCAIAAKADDGTPCCDWVGSDGAGHYVKMIHNGIEYGDMQIIAEGYWFMKHALGMSYEHMHHTFTRWNTGRLHSYLIEITAAILAHQDTDGTPLLEKILDAAGQKGTGRWTCVAALEEGSPLTLITESVMARSLSAQKQARCKAHRVFGSPVKVSKAETLSAQQREELVSALEDALYCAKIVSYAQGFELLSHTAKRRGWTLDFSRIASLWRGGCIIRSGFLSKISAAFAQQHDLENLVLAPFFAEELKRACPGWRTIVEESVRQALPVPALSAALAWFDGFTGAALPANLLQAQRDYFGAHTYERTDAPRGEFFHTNWTGTGGDTIAGTYSI
SIO_010081: TPCCA_RS01625
subclass of: SO_0000673
so part of: TPCCA_RS01625
location: complement(350804..352270)
location: region:350804-352270:-1
so has part: feature:350804-352270:-1:exon

WP_013944993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350804-352270:-1:exon

TPCCA_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01630
old locus tag: TPCCA_0333
so part of: sequence
location: 352491..353141
location: region:352491-353141:1
so has part: feature:352491-353141:1:exon
subclass of: SO_0000010

position:352491:1
position: 352491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353141:1
position: 353141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352491-353141:1:exon

TPCCA_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01630
old locus tag: TPCCA_0333
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881781.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane lipoprotein carrier protein LolA
translation: MHLLPLFPQTITTASVFFASVSEHYARLKDYAADLAMSTGSGTRAHLMRAKVIFKYPDRLRLDFSSPAEQTIVFTGDSLTIYLPTSRVALVQSVAKDDTVSAASLASPHGLALMKRFYTIAYETSSSPVPLGPDSGEMVVALVFNRKSAAETFKSLRVLVSAHTKLIRRIEAWPLSGEKITFDFSHYRLNVGIPDTRFLYDVPPTANVVHNFLFAD
SIO_010081: TPCCA_RS01630
subclass of: SO_0000673
so part of: TPCCA_RS01630
location: 352491..353141
location: region:352491-353141:1
so has part: feature:352491-353141:1:exon

WP_245522178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352491-353141:1:exon

TPCCA_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01635
old locus tag: TPCCA_0334
so part of: sequence
location: 353166..354383
location: region:353166-354383:1
so has part: feature:353166-354383:1:exon
subclass of: SO_0000010

position:353166:1
position: 353166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354383:1
position: 354383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353166-354383:1:exon

TPCCA_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01635
old locus tag: TPCCA_0334
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944995.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MPDIGELLKTTRERKHLSLEQAAHETSIARRYLEALENDEYDVFPGEPYILGFLRNYCEYLQLDTEQCIARYKHLKIQEMSLPTETLLPSKRWGSFPLLKGVACVLFLGGVLGVYYARHRALGFLSRIVFFGRAQRTPRELSPPDATGAVRETVSQSSAQHEERARRTRSSASRYTLAEEKFEHTVFPGDVLVISSGGNAYELTVSRTTPHLYLDTPIGTQVISLGQRLVMDLNTDVQPDVEISVEDIEAHQADGGARVRVFTGSLVQTLRDRSAQSFVPTSGVNVSGQTGVAAGARYQVLFEGGFAYPVTMNATFRSYCLFRYEADRTRREERYYQKGEQLTVQANNGIRVWASNGNVVQLQIVAGGKTVDVGLSRPGEVLVKDIKWIKDEDAGRFKFVVMEVD
SIO_010081: TPCCA_RS01635
subclass of: SO_0000673
so part of: TPCCA_RS01635
location: 353166..354383
location: region:353166-354383:1
so has part: feature:353166-354383:1:exon

WP_013944995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353166-354383:1:exon

TPCCA_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01640
old locus tag: TPCCA_0335
so part of: sequence
location: complement(354380..354919)
location: region:354380-354919:-1
so has part: feature:354380-354919:-1:exon
subclass of: SO_0000010

position:354380:-1
position: 354380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354919:-1
position: 354919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354380-354919:-1:exon

TPCCA_RS01640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01640
old locus tag: TPCCA_0335
EC number: 3.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881783.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0071586 - CAAX-box protein processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CPBP family glutamic-type intramembrane protease
translation: MAITTAGDICALYPLCPILLHCSTLMHSSPLRNTPHVLHAAAVTEYAFVLGTLVFPSLCFSLPSPFPFPEGEGGSFYVRLFLNALSEEVLFRAYIPERLCHHATSCTARVCGEVLSVLLFALAHRPAGSATLFAGAAGAALRVLFVREKKRSGSRARASALCAAVHALWNAYAIAAAAR
SIO_010081: TPCCA_RS01640
subclass of: SO_0000673
so part of: TPCCA_RS01640
location: complement(354380..354919)
location: region:354380-354919:-1
so has part: feature:354380-354919:-1:exon

WP_013944996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354380-354919:-1:exon

TPCCA_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01645
old locus tag: TPCCA_0336
so part of: sequence
location: 354849..356462
location: region:354849-356462:1
so has part: feature:354849-356462:1:exon
subclass of: SO_0000010

position:354849:1
position: 354849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356462:1
position: 356462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354849-356462:1:exon

TPCCA_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01645
old locus tag: TPCCA_0336
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505465.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ComEC/Rec2 family competence protein
translation: MEQCNRIGQRGYRAHISPAVVMAIAAVGGFYGTHVYEVPFPYAFFGAVQACVLCIGCLLVRSGVRFFSRWGAVRIWRRWGIAYTSVCRCCNTLFFVFCGLCVACVARTSLIAQQAPLQTLAQPQKLRVLTIHLLQEPKPAGTRFRVRARVLGAGYIDGASFSARGVCTVLFPAEVILQQYATDVTDDADARVCQYYARGLRCQIHGRFASSAPKLFISSSTPPRFIGWSSYFAQMRAQMRVALMRFLSPWGRAGGLLLALLSADSVFLSDEMRVAFRHAGLAHVLALSGMHLSLVGASATFLGRFIGTRHRGMQGAFFAMLVFVWFAGISPSLARALGMTLVLMGGQMAYVRVGLFSVLCAVLSIHMLIAPHDVQTLSFMLSYGALAGIVLLGSEITEMMSGLIPRPLASLLGTSCGAQFFTAPIVLSVIGYFAPIGVLASCVVSPLIALFLIGGSVALCCSLAVPAVAPFLSWGVYFFGEGLCAVVRFFACAPLVYVQSACGHVCAALFSFLLGGGLLEAARRVRVHKDTYVLPEL
SIO_010081: TPCCA_RS01645
subclass of: SO_0000673
so part of: TPCCA_RS01645
location: 354849..356462
location: region:354849-356462:1
so has part: feature:354849-356462:1:exon

WP_245522179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354849-356462:1:exon

TPCCA_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rsmA
locus tag: TPCCA_RS01650
old locus tag: TPCCA_0337
so part of: sequence
location: 356443..357300
location: region:356443-357300:1
so has part: feature:356443-357300:1:exon
subclass of: SO_0000010

position:356443:1
position: 356443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357300:1
position: 357300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356443-357300:1:exon

TPCCA_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rsmA
locus tag: TPCCA_RS01650
old locus tag: TPCCA_0337
EC number: 2.1.1.182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013944998.1
GO function: GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
translation: MCCPNYNSARALAQFLTERGLRMHKKWGQNFLLDPVLRTQLVKILAPERGERVWEIGAGIGAMTALLVQNSDFLTVFEIDRGFVQTLRKLFDAHIRVIEGDVLQQWHAAAAQEQPACVLGNLPYNIAARFIGNTIESGYIFKRMVVTVQKEIGLRMTALPAQKWYSYFSVLCQWQYEVRVIRNVAPVCFWPRPHVVSQALVLTKRNAVPSCVDPALFLHVTKTLFSARRKTVRNNLLTWQKRMPGGAAVCVEELCARAGIDARARAEQLSIYDFITLSDTLRALL
SIO_010081: TPCCA_RS01650
subclass of: SO_0000673
so part of: TPCCA_RS01650
location: 356443..357300
location: region:356443-357300:1
so has part: feature:356443-357300:1:exon

WP_013944998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356443-357300:1:exon

TPCCA_RS01655
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01655
old locus tag: TPCCA_0338
so part of: sequence
location: 357318..357806
location: region:357318-357806:1
so has part: feature:357318-357806:1:exon
subclass of: SO_0000010

position:357318:1
position: 357318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357806:1
position: 357806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357318-357806:1:exon

TPCCA_RS01655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01655
old locus tag: TPCCA_0338
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881786.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARVYILFFSVFFVFPLFSEDAARDVELSDAPVPYEDTEFSLWQKELYRFEALSIGAFPIVTLLSFITYDIIRLIQQWSTKPPTWWALIIPGAELPPLSTKERAIVFGVAVGISVTIGLIDVTYRAVKRAIHRRSLERSQLVPDPIELVPLDSFVEGTDDSM
SIO_010081: TPCCA_RS01655
subclass of: SO_0000673
so part of: TPCCA_RS01655
location: 357318..357806
location: region:357318-357806:1
so has part: feature:357318-357806:1:exon

WP_013944999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357318-357806:1:exon

TPCCA_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01660
old locus tag: TPCCA_0339
so part of: sequence
location: 357818..358813
location: region:357818-358813:1
so has part: feature:357818-358813:1:exon
subclass of: SO_0000010

position:357818:1
position: 357818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358813:1
position: 358813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357818-358813:1:exon

TPCCA_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01660
old locus tag: TPCCA_0339
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881787.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RluA family pseudouridine synthase
translation: MSYSCSAESASVCSVHFSVFRIPGATCRCDVFCAEHVFFCARSQLKRIVRALCVNGHTAKFSRPLHVRDRVSFEWVRSVPPALIPENISLSILFENEDIIAVNKAQGMIVHPGAGHWTGTLVQALSFYRVYRARFEDEFSRQFQKGFPDFFSTLRQGIVHRLDKDTSGVLLTSRNMHAHEALVRSFKKRQVRKVYLALLQGVPARGVGVIETTIVRDRRRRTRFVASEDFSKGKYARTRYKVMKICGACAFVQFLLDTGRTHQIRVHARYLGCPVVGDPLYGSRNICGIPTTLMLHAYAVRFVLPRTKKRITLVAPIPLRFVRLMHRLSGR
SIO_010081: TPCCA_RS01660
subclass of: SO_0000673
so part of: TPCCA_RS01660
location: 357818..358813
location: region:357818-358813:1
so has part: feature:357818-358813:1:exon

WP_013945000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357818-358813:1:exon

TPCCA_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01665
old locus tag: TPCCA_0340
so part of: sequence
location: complement(358799..360271)
location: region:358799-360271:-1
so has part: feature:358799-360271:-1:exon
subclass of: SO_0000010

position:358799:-1
position: 358799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360271:-1
position: 360271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358799-360271:-1:exon

TPCCA_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01665
old locus tag: TPCCA_0340
EC number: 6.3.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881788.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: folylpolyglutamate synthase/dihydrofolate synthase family protein
translation: MSDLSNVHQFSFPARIAASSVPHIIVRPSAHGVSHIPVHSFQDFYAWVERIRTLEKMPPSGTPPLHRMTALARALCNPHDAYQSIHVAGTKGKGSSARMLAAILNEIGFNTGLYASPHVMDPRERITRAGVFFSPAEYASACTHVYHTVKKTENLRDYGQATWFELITLLAFVLFAQQRMEWSVFEVGLGGRLDATNIICPSICLLLPIEQEHTRILGTRIKSIAKEKGGIIKPYTPIFCFDQPEDALHVFKHIAREKHAPFFYLPDMVTHIESSIKHFTHTATLSFNAAHPVGRLFARNIHCTLALCDIVQAKNAALAACAAKYLFPTVSETLIERGLSRAYVPARFEIMQEDPLIVIDGAHTTQSIRCACRTFSSLLPSAQYILLFACAADKAVSQFPPLFSHAASEIFLTIPGTFKHADIQKTYHAFRTTFHQTVPIFWSEDFASIISRALYASFAQRKALLAIGSFYLAAEVKRIYARTCHTLPTR
SIO_010081: TPCCA_RS01665
subclass of: SO_0000673
so part of: TPCCA_RS01665
location: complement(358799..360271)
location: region:358799-360271:-1
so has part: feature:358799-360271:-1:exon

WP_013945001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358799-360271:-1:exon

TPCCA_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: murC
locus tag: TPCCA_RS01670
old locus tag: TPCCA_0341
so part of: sequence
location: 360290..361735
location: region:360290-361735:1
so has part: feature:360290-361735:1:exon
subclass of: SO_0000010

position:360290:1
position: 360290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361735:1
position: 361735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360290-361735:1:exon

TPCCA_RS01670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: murC
locus tag: TPCCA_RS01670
old locus tag: TPCCA_0341
EC number: 6.3.2.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881789.1
GO function: GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate--L-alanine ligase
translation: MGRGTLPKDVSGIKIHMIGIKGTGMSALAELLCARGARVSGSDVADVFYTDRILARLGVPVRTPFSCQNLADAPDVVIHSAAYVPEENDELAEAYRRGIPTLTYPEALGDISCARFSCGIAGVHGKTTTTAMIAQMVKELRLDASVLVGSAVSGNNDSCVVLNGDTFFIAETCEYRRHFLHFHPQKIVLTSVEHDHQDYYSSYEDILAAYFHYIDRLPQFGELFYCVDDQGVREVVQLAFFSRPDLVYVPYGERAWGDYGVSIHGVQDRKISFSLRGFAGEFYVALPGEHSVLNATGALALALSLVKKQYGEVTVEHLTTLRKVLALFQGCRRRSEILGEVRGILFMDDYGHHPTAIKKTLRGLKTFFPERRIVVDFMSHTYSRTAALLTEFAESFQDADVVILHEIYASAREVYQGEVNGEHLFELTKRKHRRVYYYEAVMQAVPFLQAELKEGDLFVTLGAGDNCKLGEVLFNYFKGEV
SIO_010081: TPCCA_RS01670
subclass of: SO_0000673
so part of: TPCCA_RS01670
location: 360290..361735
location: region:360290-361735:1
so has part: feature:360290-361735:1:exon

WP_013945002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360290-361735:1:exon

TPCCA_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01675
old locus tag: TPCCA_0342
so part of: sequence
location: 361856..362416
location: region:361856-362416:1
so has part: feature:361856-362416:1:exon
subclass of: SO_0000010

position:361856:1
position: 361856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362416:1
position: 362416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361856-362416:1:exon

TPCCA_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01675
old locus tag: TPCCA_0342
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945003.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MSNRCDVSGNKAVRIAVSGASGCGNTTVSALLAERLGLPLVNYTFRNIARELGISLSEVLERARTDNRFDKAVDARQLCLAMRSSCVVGSRLAIWLVKDAALKVYLLASLKERVKRVLQREGGDVQDVERFTSMRDAEDMSRYKKLYRIDNTNYSFADLVLNTEGCDQETVVSIIIEMLCARGIAW
SIO_010081: TPCCA_RS01675
subclass of: SO_0000673
so part of: TPCCA_RS01675
location: 361856..362416
location: region:361856-362416:1
so has part: feature:361856-362416:1:exon

WP_013945003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361856-362416:1:exon

TPCCA_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01680
old locus tag: TPCCA_0343
so part of: sequence
location: 362410..363243
location: region:362410-363243:1
so has part: feature:362410-363243:1:exon
subclass of: SO_0000010

position:362410:1
position: 362410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363243:1
position: 363243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362410-363243:1:exon

TPCCA_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01680
old locus tag: TPCCA_0343
EC number: 3.2.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945004.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: A/G-specific adenine glycosylase
translation: MVGLSQSAGDIEKFQNAILDFYAQQGRDFPWRSTCDAYAILVSEFMLQQTQTERVCPKYAEWLHRFPSLESLACAPFAHVLQAWIGLGYNRRARFLHQSAKLIVERYCAVVPDDPSELKKLPGVGDYTAAAVACFAYNKATVFLETNIRAVFIRFFFPDTHQVSDRELLSLVRCTLYEENPRRWYYALMDYGAVLKRKIINPNRRSKHYVKQSPFEGSLRQVRGAVLREISGMQHAVREKTLFAKLSFEHERLSRALDSLVSEGLVVKTEAGYSIAD
SIO_010081: TPCCA_RS01680
subclass of: SO_0000673
so part of: TPCCA_RS01680
location: 362410..363243
location: region:362410-363243:1
so has part: feature:362410-363243:1:exon

WP_013945004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362410-363243:1:exon

TPCCA_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: mfd
locus tag: TPCCA_RS01685
old locus tag: TPCCA_0344
so part of: sequence
location: complement(363248..366670)
location: region:363248-366670:-1
so has part: feature:363248-366670:-1:exon
subclass of: SO_0000010

position:363248:-1
position: 363248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366670:-1
position: 366670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363248-366670:-1:exon

TPCCA_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: mfd
locus tag: TPCCA_RS01685
old locus tag: TPCCA_0344
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014343538.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription-repair coupling factor
translation: MRGILHSWNELQHALRSLRAARFPYRVEGCTGGLRSYFFGEYVRTCCAHIVLVVPTEQDVAAVCTDLAHAAVPTRVLPWWGSLPYRPVSPNAHVFSHRVEALCALAQRDATAPCAFVLTQRALLTPVPPLDYVRTLKRSFRVGEHIEIHTLAAQLMQWGYARVDHVSACAEFSLRGEILDIAAAAQAADNTQAYRIVCDFNTIERIHILAVSTCAVLQEVSACTLYAAKEILWSEERIAFLHQNLQKLSECSAHCVPCIEELTHRKTYEGEEMFYPLCFERPTCVLEYFRHSPSPPSVFYLDYERQHNGARALQDECRNLYHKMQLAHEYVPARWYPQPEHIVLDFSAVCALHLHTVYFTHFFPQLPACESICLASDPARSFFGNIPYFKEELLRLSKDGWHVFIFAESEQQALRIRALVKGCDVTVLPCALSAGFSVPALKILIVQEGEIFGRRRKTPQSVQRARSTPIDTFVELNPGDYVVHAQYGIGLFKGIERIKTAQSERDYVNLLYAQEETILIPIEQAHLVQRYIGNEGNKPHLDSLGSKSWETRKARVKKSVENIAQKLVELYSLRKTTRGHAFPKDDEWQYAFEAAFPYEETDDQRICIEEVKQDMQEAVPMDRLVCGDVGYGKTEIAMRAAFKAVMGGKQVVFLTPTTLLVEQHFRTICNRFKHFPVRIEKLSRFVPKSEQKDILAKLAHGDIDLIVGTHRLIQKDVSFKDLGLMILDEEQRFGVQDKEKLKQMKTNVDCLSLSATPIPRTLHMGMLKIRDMSLLTTPPEGRLPIETVIQQFDPNLVATAIRKELDREGQIFYLHNRIENLESVKCMLQKLVPELSICVAHSLMGSEELEDIFERFYQKTFQLLLSTTIIENGIDVPNANTIIIDRADMYGVSQLYQLRGRVGRSDKKAYAYLLYYHDVALSDLAIKRLQVISDFTDLGAGFKVALKDMEIRGVGNLLGKEQSGDIYSVGFDLYVQLLEEAIERLQHAPNEQRIETVIDLNYRGFIPHTYIAADEIKMELYKKIAAAHTHEELERIRTETITRFGPIPEEAAGLFTVAEIKVRCEKLAILSLKETHESLLIEFDKVCDTAFKKILRLVQTSNDRVRLDAKQPNMLILTSDAIEIKEKGIFICEILKRLES
SIO_010081: TPCCA_RS01685
subclass of: SO_0000673
so part of: TPCCA_RS01685
location: complement(363248..366670)
location: region:363248-366670:-1
so has part: feature:363248-366670:-1:exon

WP_013945005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363248-366670:-1:exon

TPCCA_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01690
old locus tag: TPCCA_0345
so part of: sequence
location: 366823..367914
location: region:366823-367914:1
so has part: feature:366823-367914:1:exon
subclass of: SO_0000010

position:366823:1
position: 366823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367914:1
position: 367914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366823-367914:1:exon

TPCCA_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01690
old locus tag: TPCCA_0345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945007.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospho-N-acetylmuramoyl-pentapeptide- transferase
translation: MGLIFFRYDRCYMLSVLSYLHVYFGPFRLLQSYAVLMGIALYAGFFFTYGVLPSAYRFLPQDRGRAFAPCAQEAAGKPTGAGVIFVSVFVLLVYLLMRPGFVHALVLLLTWGVMLTGYLDDCAQVCWGEYRKGALDFLFAVLTAALLGHFYFHDQVFWWFPFFSDPVLVSPFLFFAGSVVILWMSINATNCTDGVDGLSGALVLMALLSMGTIFYFLLGNVRAAQYLLVPFVVDGAQWALMSFALAGALMGYVWRNAHPSTVLMGDAGSRALGFFIGVLVLISGNPFLLLMTSGVILVNGGTGLLKVVLLRFFHVRILSRVRFPLHDHMRENWHWSTAQVLLRFMILQGLLTIGLLGVLFKLR
SIO_010081: TPCCA_RS01690
subclass of: SO_0000673
so part of: TPCCA_RS01690
location: 366823..367914
location: region:366823-367914:1
so has part: feature:366823-367914:1:exon

WP_013945007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366823-367914:1:exon

TPCCA_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01695
old locus tag: TPCCA_0346
so part of: sequence
location: 368098..368772
location: region:368098-368772:1
so has part: feature:368098-368772:1:exon
subclass of: SO_0000010

position:368098:1
position: 368098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368772:1
position: 368772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368098-368772:1:exon

TPCCA_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01695
old locus tag: TPCCA_0346
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881794.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2715 domain-containing protein
translation: MAVCAVAACAGPCFCVQAFISSRIGYGHFGIYGNEIKDSYYKHVPMTGLGVDVVTSSGVAMVFNVETALTQLMFRAQALLGYAFEVGRFRFTPAIGGSFLASHDHAAGVALSLDFQYFFNDWVGLDLNIGAGVDVPVNSNLRYLMRVGTPELAKILITHAVTHGLANAWISGLPWWNSFSSWLGDTVGKVAGFVTRLIANFLLKGSQYSMLVPVVVRLGGVYKV
SIO_010081: TPCCA_RS01695
subclass of: SO_0000673
so part of: TPCCA_RS01695
location: 368098..368772
location: region:368098-368772:1
so has part: feature:368098-368772:1:exon

WP_245522180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368098-368772:1:exon

TPCCA_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01700
old locus tag: TPCCA_0347
so part of: sequence
location: 368876..369586
location: region:368876-369586:1
so has part: feature:368876-369586:1:exon
subclass of: SO_0000010

position:368876:1
position: 368876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369586:1
position: 369586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368876-369586:1:exon

TPCCA_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01700
old locus tag: TPCCA_0347
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505469.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2715 domain-containing protein
translation: MNGRRVFLGIVVVVCAARCFCADVFFSSHLGYGRFYAVGKDIEGQHIHVPSIGGGVCVVADGGFAFACTVDAALTRIMLKTQALFGYAFRWGAFSLIPLLGMDVIVSSDHAFGVAAQVSFQHLISEWWGFALSVSGGVDFPLNPNTRFLAGKLPAETVQRVALVALRQKLISEGIIKALDLGWFITLALTVVAEGFSWIVSQSAWIAQKAVNYFLSDTTRCLILPVTLRAGPTFRI
SIO_010081: TPCCA_RS01700
subclass of: SO_0000673
so part of: TPCCA_RS01700
location: 368876..369586
location: region:368876-369586:1
so has part: feature:368876-369586:1:exon

WP_013945009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368876-369586:1:exon

TPCCA_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01705
old locus tag: TPCCA_0348
so part of: sequence
location: complement(369607..370722)
location: region:369607-370722:-1
so has part: feature:369607-370722:-1:exon
subclass of: SO_0000010

position:369607:-1
position: 369607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370722:-1
position: 370722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369607-370722:-1:exon

TPCCA_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01705
old locus tag: TPCCA_0348
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342382.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Gx transporter family protein
translation: MRSRLPLDVRDELVSLLGGMCFFLSTVEHVIPKPLPFFRVGLANLPLLISLDLLPFCAYARLVFLKVIGQALVSGTLFSYVFVLSLAGSTASGALMYALRFVPCRYLSCVGISVMGAFCSNVIRLTLARVLVFGAGVWYVLPLFCALGAVSSTLLGALTGHFLSHSQWYAHLQNAAYGQQDTAPPASLFFPVQAGCECTAPCSEHGLRPRVLRYVRMGTGLLLLLILLCVPRLSVQASVCGIALLLYAATGGRIRWMTLAGLWVGTLACYLRPPVGRVWATVLGVPLTSGALSAGARQACMASGMVYLSKWILRVPPHLPGKFGQTVVHALSLMHRLSSFKLRGARRNATQEIDRILLALWATRQRTPTRR
SIO_010081: TPCCA_RS01705
subclass of: SO_0000673
so part of: TPCCA_RS01705
location: complement(369607..370722)
location: region:369607-370722:-1
so has part: feature:369607-370722:-1:exon

WP_245522181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369607-370722:-1:exon

TPCCA_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01710
old locus tag: TPCCA_0349
so part of: sequence
location: complement(370701..371231)
location: region:370701-371231:-1
so has part: feature:370701-371231:-1:exon
subclass of: SO_0000010

position:370701:-1
position: 370701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371231:-1
position: 371231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370701-371231:-1:exon

TPCCA_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01710
old locus tag: TPCCA_0349
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945011.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidylprolyl isomerase
translation: MKIANECVVNIEYTLRDDTGEIIDSSDVMGALEYVQGHGMIIPGLETALINREEGEEFSITIPPVGAYGEVQEDLRMTVGRDQFPPNVPIEVGMRFDAGSGGDSRPVTVTDVQGETIIVDANHPLAGKTLHFEVAVRSVREATDDDLAALLFRESTSGGGCGSGAGGCGSCGAGCH
SIO_010081: TPCCA_RS01710
subclass of: SO_0000673
so part of: TPCCA_RS01710
location: complement(370701..371231)
location: region:370701-371231:-1
so has part: feature:370701-371231:-1:exon

WP_013945011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370701-371231:-1:exon

TPCCA_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01715
old locus tag: TPCCA_0350
so part of: sequence
location: 371444..372730
location: region:371444-372730:1
so has part: feature:371444-372730:1:exon
subclass of: SO_0000010

position:371444:1
position: 371444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372730:1
position: 372730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371444-372730:1:exon

TPCCA_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01715
old locus tag: TPCCA_0350
EC number: 1.2.1.41
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945012.1
GO function: GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO process: GO:0006561 - proline biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate-5-semialdehyde dehydrogenase
translation: MVEVYARLRAAAARLAVCSAAEKDGALRAVRDALHAQREDILRANAQDLARAREAGLAAPLVARLALSEHLLEDMLQSLTVLSLQRDPIGEIIEGYTLANGLEIRKVRVPLGVVAVIYESRPNVTVDAFALAYKSGNAVLLRAGSAASYSNAALLRAIHVGLKKAHGVVDAVAVPPVLEEKYGDVDHILRARGFIDAVFPRGGAALIRRVVEGARVPVIETGCGVCHLYVDESANIDVALQIAENAKLQKPAACNSVETLLVHCAVARPFLHRVQEIFATYEETTRKTGGVDFFCDAESFSLLTERGARKNVFHAQTETWDREYLDYQVSVRVVPNFEEALRHIARHSTKHSEIIVTRDRARARRFHQEVDAACVYVNASSRFTDGGQFGMGAEIGVSTQKLHARGPMGLCALTTSKYLIDGEGQVRP
SIO_010081: TPCCA_RS01715
subclass of: SO_0000673
so part of: TPCCA_RS01715
location: 371444..372730
location: region:371444-372730:1
so has part: feature:371444-372730:1:exon

WP_013945012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371444-372730:1:exon

TPCCA_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: proB
locus tag: TPCCA_RS01720
old locus tag: TPCCA_0351
so part of: sequence
location: 372727..373617
location: region:372727-373617:1
so has part: feature:372727-373617:1:exon
subclass of: SO_0000010

position:372727:1
position: 372727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373617:1
position: 373617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372727-373617:1:exon

TPCCA_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: proB
locus tag: TPCCA_RS01720
old locus tag: TPCCA_0351
EC number: 2.7.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881799.1
GO function: GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
GO process: GO:0006561 - proline biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate 5-kinase
translation: MIRALFAAAKKIVIKIGSNTLAQADGTPDEEFLAECARACAALMRDGKQIVVVSSGAQVAGISTLHCLSSPPQGAGLERHESRGVIPGDGASCKQALCAVGQAELISRWRSAFAAHQQCVGQFLCTKEDFTDSDRAAQVRYTLSFLLERRVVPILNENDALCCSDVPSVPADRRVSLSPQKRIGDNDSLSAFVALLWQADLLLLLSDIDGVYDKDPKAHTDAQHVPLVTDVSALVGKTSMGSSNVFGTGGIATKLDAARLVTRAGIPLVLANGRHPDPILSLMRGDARGTLFVPVS
SIO_010081: TPCCA_RS01720
subclass of: SO_0000673
so part of: TPCCA_RS01720
location: 372727..373617
location: region:372727-373617:1
so has part: feature:372727-373617:1:exon

WP_013945013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:372727-373617:1:exon

TPCCA_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01725
old locus tag: TPCCA_0352
so part of: sequence
location: 373749..374006
location: region:373749-374006:1
so has part: feature:373749-374006:1:exon
subclass of: SO_0000010

position:373749:1
position: 373749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374006:1
position: 374006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373749-374006:1:exon

TPCCA_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01725
old locus tag: TPCCA_0352
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881800.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YdbC family protein
translation: MREKEGGVVNDDFHYEVTRNWGTLSTSGNGWSLELKSISWNGRPEKYDIRAWSPDKSKMGKGVTLTRAEIVALRDLLNSMSLDPY
SIO_010081: TPCCA_RS01725
subclass of: SO_0000673
so part of: TPCCA_RS01725
location: 373749..374006
location: region:373749-374006:1
so has part: feature:373749-374006:1:exon

WP_010881800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373749-374006:1:exon

TPCCA_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rnhA
locus tag: TPCCA_RS01730
old locus tag: TPCCA_0353
so part of: sequence
location: complement(374003..374512)
location: region:374003-374512:-1
so has part: feature:374003-374512:-1:exon
subclass of: SO_0000010

position:374003:-1
position: 374003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374512:-1
position: 374512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374003-374512:-1:exon

TPCCA_RS01730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rnhA
locus tag: TPCCA_RS01730
old locus tag: TPCCA_0353
EC number: 3.1.26.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342386.1
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease HI
translation: MNAHAALTLYTDGACLGNPGPGGWAFALVPSDVPFLETGQTAPEAAAFTRSGSAYPSTNNRMELCAVINALQEAHGRAAEAVVVVTDSQYVRKGITQWIHTWRHNGWKTAAKQPVKNKDLWEALSALADTLSVEWRWVKGHAGDPYNELCDRLATDAARRAAQSTADRP
SIO_010081: TPCCA_RS01730
subclass of: SO_0000673
so part of: TPCCA_RS01730
location: complement(374003..374512)
location: region:374003-374512:-1
so has part: feature:374003-374512:-1:exon

WP_013945014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374003-374512:-1:exon

TPCCA_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: tmk
locus tag: TPCCA_RS01735
old locus tag: TPCCA_0354
so part of: sequence
location: 374776..375402
location: region:374776-375402:1
so has part: feature:374776-375402:1:exon
subclass of: SO_0000010

position:374776:1
position: 374776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375402:1
position: 375402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374776-375402:1:exon

TPCCA_RS01735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: tmk
locus tag: TPCCA_RS01735
old locus tag: TPCCA_0354
EC number: 2.7.4.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881802.1
GO function: GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO process: GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTMP kinase
translation: MNILHNFVVFEGIDGTGTSTQLRALERHFQARKDMVFTQEPTGGEIGTLIRDVLQKRVIMSSKALGLLFAADRHEHLEGAGGINDCLAEGKIVLCDRYVFSSLVYQGMAVSGSFAYELNKEFPLPEVVFYFDAPIEVCVERITARGLQTELYEYTSFQEKARKGYETIFRKCRHLYPAMKVIEIDAREEIEVVHERILHHLREYRRLK
SIO_010081: TPCCA_RS01735
subclass of: SO_0000673
so part of: TPCCA_RS01735
location: 374776..375402
location: region:374776-375402:1
so has part: feature:374776-375402:1:exon

WP_010881802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374776-375402:1:exon

TPCCA_RS05265
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05265
old locus tag: TPCCA_0355
pseudo: true
so part of: sequence
location: complement(375369..375751)
location: region:375369-375751:-1
so has part: feature:375369-375751:-1:exon
subclass of: SO_0000010

position:375369:-1
position: 375369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375751:-1
position: 375751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375369-375751:-1:exon

TPCCA_RS05265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05265
old locus tag: TPCCA_0355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881803.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: TPCCA_RS05265
subclass of: SO_0000673
so part of: TPCCA_RS05265
location: complement(375369..375751)
location: region:375369-375751:-1
so has part: feature:375369-375751:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:375369-375751:-1:exon

TPCCA_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01745
old locus tag: TPCCA_0356
so part of: sequence
location: 376004..376273
location: region:376004-376273:1
so has part: feature:376004-376273:1:exon
subclass of: SO_0000010

position:376004:1
position: 376004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376273:1
position: 376273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376004-376273:1:exon

TPCCA_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01745
old locus tag: TPCCA_0356
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945017.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-binding protein
translation: MSAKIYVGNLNYATTEAGLASLFSQFGEVLSVAVIKDKLTQRSKGFGFVEMESAESAELVINELNEKEFEGRRLRVNYAEEKPRFPFKN
SIO_010081: TPCCA_RS01745
subclass of: SO_0000673
so part of: TPCCA_RS01745
location: 376004..376273
location: region:376004-376273:1
so has part: feature:376004-376273:1:exon

WP_013945017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376004-376273:1:exon

TPCCA_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01750
old locus tag: TPCCA_0357
so part of: sequence
location: 376456..377115
location: region:376456-377115:1
so has part: feature:376456-377115:1:exon
subclass of: SO_0000010

position:376456:1
position: 376456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377115:1
position: 377115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376456-377115:1:exon

TPCCA_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01750
old locus tag: TPCCA_0357
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945018.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin--[acetyl-CoA-carboxylase] ligase
translation: MDEAASRAQGCEEGAVFCAGEQVAGRGRGDQRKWQSEPGKNLLCTVVLRRVAFPAFSLCVGYAVALAYMAFLGGVCAPRIKWPNDVLVCDRKIAGVLCQVRAGALLVGIGCNLLQVKFPPELSHACSLAQIVGGERCPDPFAFLPVLLDRLYACVMAPPSIGVLESCLWKQGEYVCFRECAGTRPPILGRVVGLAADGALCIDSAGSMRSYYSGEIAFW
SIO_010081: TPCCA_RS01750
subclass of: SO_0000673
so part of: TPCCA_RS01750
location: 376456..377115
location: region:376456-377115:1
so has part: feature:376456-377115:1:exon

WP_013945018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376456-377115:1:exon

TPCCA_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01755
old locus tag: TPCCA_0358
so part of: sequence
location: complement(377120..378700)
location: region:377120-378700:-1
so has part: feature:377120-378700:-1:exon
subclass of: SO_0000010

position:377120:-1
position: 377120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378700:-1
position: 378700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377120-378700:-1:exon

TPCCA_RS01755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01755
old locus tag: TPCCA_0358
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881806.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 57 protein
translation: MKKMPVHSLAFVLDCNLPFVRGAGASSLLAESRFFLEISYTYLPLLRLCETLERERVPFNISLAIGPVLCEMLANRVLMDRYRRALDALIEFGEREAIRLRNSLQERVQAEAVLRSLRSHRDYFDHCDGALLERINHFFRTGSIELLATTAVNCFLPFYQDMPESISAQIEMGLINYRKHFSSIPRGFYLPELGYAPALERTIKSYGFSYTILETHSFLFGTRVPRRGIFEPAQTSNGLWCLGKDRVATAEVHGATHSFCTQAVYANTEQDAGFILPEEALYPLFEPHKERMATGYLYHARSGTPYEQEKAQRTCVADARAFVRNRTEIFEKVVHATAPFEAMSVCVFPASLFGVAWAEGMDWLEAVFRTVAESAQMRVSCTAALTCPAVGVSIIEPFFGSSLGGGYADELINSANDWMHPAIQKTTERMIDLTERFAHDTGFRERLLNMAARDVLLCQSLFWPLLGNHCRYPEYAASECADHLKAFTRVYEALGSGEVSAQWLMRRERELPLFSEINFRFFSKKK
SIO_010081: TPCCA_RS01755
subclass of: SO_0000673
so part of: TPCCA_RS01755
location: complement(377120..378700)
location: region:377120-378700:-1
so has part: feature:377120-378700:-1:exon

WP_013945019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377120-378700:-1:exon

TPCCA_RS05270
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05270
old locus tag: TPCCA_0359
so part of: sequence
location: complement(378712..379347)
location: region:378712-379347:-1
so has part: feature:378712-379347:-1:exon
subclass of: SO_0000010

position:378712:-1
position: 378712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379347:-1
position: 379347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378712-379347:-1:exon

TPCCA_RS05270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05270
old locus tag: TPCCA_0359
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945020.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4912 domain-containing protein
translation: MALTKSFLESRSTGELFALADELGLCLPEDLNRRLVIGEILDCYHSALDLNPPCAPQSLESKGTSCAYNTTEIHILARDPLWFFVFWDIHEQLFCTLTQSPQFRSFFLRVHSLGGHGWHTSLDHFDIDVPLKDRKRYVHLSLADDTNRIDLCCKMLQRERILAQSRVVTLQRSVIERSLNPEDPTGAEVLSLCGLPLLEETYPSTSLPVCS
SIO_010081: TPCCA_RS05270
subclass of: SO_0000673
so part of: TPCCA_RS05270
location: complement(378712..379347)
location: region:378712-379347:-1
so has part: feature:378712-379347:-1:exon

WP_013945020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378712-379347:-1:exon

TPCCA_RS05485
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05485
old locus tag: TPCCA_0360
so part of: sequence
location: 379558..379734
location: region:379558-379734:1
so has part: feature:379558-379734:1:exon
subclass of: SO_0000010

position:379558:1
position: 379558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379734:1
position: 379734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379558-379734:1:exon

TPCCA_RS05485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05485
old locus tag: TPCCA_0360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKMAGASKNSRTAAATQRFNCPCGGEVVLKSIVDNGKVKNIAECPKCRRVERRPRDFN
SIO_010081: TPCCA_RS05485
subclass of: SO_0000673
so part of: TPCCA_RS05485
location: 379558..379734
location: region:379558-379734:1
so has part: feature:379558-379734:1:exon

WP_013945021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379558-379734:1:exon

TPCCA_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01765
old locus tag: TPCCA_0361
so part of: sequence
location: complement(379731..380534)
location: region:379731-380534:-1
so has part: feature:379731-380534:-1:exon
subclass of: SO_0000010

position:379731:-1
position: 379731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380534:-1
position: 380534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379731-380534:-1:exon

TPCCA_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01765
old locus tag: TPCCA_0361
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342391.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysophospholipid acyltransferase family protein
translation: MCGILSIVVSIAVLAPLAVANTLCYALYRPGCRWVNHAVSTWGARTIFAVLHTYGRLKFYSDYTHAEHLPTQYLVVSNHQSVLDTPALMRYFGYIDAPRLRFVAKRELARFVPLVSTMLKSGRHCLIDRHQSGAQAMQALETFTHHVMRERWLPVIFPEGTRSRNGALRIFHAAGFRALTARLPLPVVVCALDGGWNLRPLLKIGQKLKGSAYRVKVLGVYPAPHNKDEQLSLLREAKALIQAQLDAWRSETTCPQDECLTRASKDS
SIO_010081: TPCCA_RS01765
subclass of: SO_0000673
so part of: TPCCA_RS01765
location: complement(379731..380534)
location: region:379731-380534:-1
so has part: feature:379731-380534:-1:exon

WP_013945022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379731-380534:-1:exon

TPCCA_RS05275
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpmB
locus tag: TPCCA_RS05275
old locus tag: TPCCA_0362
so part of: sequence
location: 380706..380891
location: region:380706-380891:1
so has part: feature:380706-380891:1:exon
subclass of: SO_0000010

position:380706:1
position: 380706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380891:1
position: 380891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380706-380891:1:exon

TPCCA_RS05275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpmB
locus tag: TPCCA_RS05275
old locus tag: TPCCA_0362
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881810.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L28
translation: MSKSMHHCKRVWKPNLLAVRVVVDGSALNMRICARCLRSNPLMKKAQPRANAPLRAAAPKL
SIO_010081: TPCCA_RS05275
subclass of: SO_0000673
so part of: TPCCA_RS05275
location: 380706..380891
location: region:380706-380891:1
so has part: feature:380706-380891:1:exon

WP_235214120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380706-380891:1:exon

TPCCA_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01775
old locus tag: TPCCA_0363
so part of: sequence
location: 381389..383821
location: region:381389-383821:1
so has part: feature:381389-383821:1:exon
subclass of: SO_0000010

position:381389:1
position: 381389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383821:1
position: 383821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381389-383821:1:exon

TPCCA_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01775
old locus tag: TPCCA_0363
EC number: 2.7.13.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002689329.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheA
translation: MSDYLDAGNEELLKDFFSEAEQQVEQLESNILVIEQDPTNRDAVDEIFRAAHTLKGGAATVEMHELSGFTHAVEDLLDGIRSEKVTVDGAVVDLLLTSLDVIKAMLESRAGGGPYVEDISDLVARLRSYLPASGTVPGAARGLSVSSPNAAEAAKGTAVGEDGTEAPQVGRVPPLSLLSEYDRLELREIVPPEHSVYALTVRFDESNLMNTVGGIQVFTALKSCASVLKTVPDFDALYQDMFHEYVVYFVSTVQDSVCVSQVASIPDVTLSVSVAEVALADLCTPLSEHGELGVCADAGTGGVSEGSGAAVRSGGERVPNSLPKQVAGCAVPSAKDSSKATSSGYGSGSVLRVDAKRIDYLLNLVSETVIIKASLNQSALEFGEVYTLFQNANGAYKERLRKFFDRVPAYLEKVRNGQDADAVRKGMIAEVVGVFDIFSSFENGLKQSVTKFRSSAQNLGRISGELQEGVMKIRMVPISQIFSRYPRVVRDLSRDLRKEVRLVIQGEETELDKSVVEDLLDPIMHCVRNSLDHGIEAPEVRARSGKPAQGTLLLRASNEGNMIVIEVADDGRGIDVEAVKTKAVERGVLHPGKNLTEVEAFQLIFAPGFSTSRSVSSVSGRGVGLDVVKTHIERLNGTVSVFSEVQKGTRFVIKLPLTLAIIQGLLIRVGQEVYSIPIASVIESHRIKSEEINRIDNYEVFNVRNEVISLLRLDRLFGISCDDEVTGQYHYVVIVGAAEKKVGLMVDALIGEEDVVIKPLRDQFTSSPGIAGASILGDGSVSLIIDVGQLLELGLKREILARERREATVW
SIO_010081: TPCCA_RS01775
subclass of: SO_0000673
so part of: TPCCA_RS01775
location: 381389..383821
location: region:381389-383821:1
so has part: feature:381389-383821:1:exon

WP_041609990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381389-383821:1:exon

TPCCA_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01780
old locus tag: TPCCA_0364
so part of: sequence
location: 383815..385182
location: region:383815-385182:1
so has part: feature:383815-385182:1:exon
subclass of: SO_0000010

position:383815:1
position: 383815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385182:1
position: 385182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383815-385182:1:exon

TPCCA_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01780
old locus tag: TPCCA_0364
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945025.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CheR family methyltransferase
translation: MVGNLGHGLGTMIEHMEAEIGIRGSFDGGVREPLAVIDFKMVTFSLAGKDYAVDIMQVKEIAKAGSFTYVPNTSPFVLGVYNLRGDIIPIIDLRRFFNIPAPRKSRQAIENMVIVTVEDQTFGVVVDGIDKVIGVSKTTIQPPHPIFGDINIKYIRGVVEEAGKLYILLDVHRIFSFRLGEEERTAVVDRGVVPSPSPPAISVPPGDEENLNVGFISDTLAAFGRFFTSAVNEGWLRSRYLVWRDVRSGAEVQLQHEEDVAEFLSTFPSPDTGVFWSGEYAASVGSVLSRMQVGKVVTVWNIGCGAGHESYSLAVLLRKTFPDAVVRVHASDSDLFSISNAPMLTVPEHVIGDWYKPYVVKGVSGSYTFSQEIKEMVLFEYHDCTHPSALPDVDLIVARDVLSSLAVPVQHTLLKEFSEKLKATGVVLLGQNEVMPKDTGWLRQIEGTVAVFSKE
SIO_010081: TPCCA_RS01780
subclass of: SO_0000673
so part of: TPCCA_RS01780
location: 383815..385182
location: region:383815-385182:1
so has part: feature:383815-385182:1:exon

WP_013945025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383815-385182:1:exon

TPCCA_RS01785
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01785
old locus tag: TPCCA_0365
so part of: sequence
location: 385204..385668
location: region:385204-385668:1
so has part: feature:385204-385668:1:exon
subclass of: SO_0000010

position:385204:1
position: 385204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385668:1
position: 385668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385204-385668:1:exon

TPCCA_RS01785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01785
old locus tag: TPCCA_0365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002668974.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheX
translation: MRVEYINPFSEAAYVVLSEVLAGETKRGDLYLKSTCMPVMGVAAIVGLAGDVEGRVVFDMTLDTALKIASSMNEEKLAAFDELARATITELANLITAKAVTTLHELGFKFDLTPPALFTGDNMEISSSDIEALIVPMETPQGKVEINVAIRDKV
SIO_010081: TPCCA_RS01785
subclass of: SO_0000673
so part of: TPCCA_RS01785
location: 385204..385668
location: region:385204-385668:1
so has part: feature:385204-385668:1:exon

WP_010881813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385204-385668:1:exon

TPCCA_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01790
old locus tag: TPCCA_0366
so part of: sequence
location: 385681..386115
location: region:385681-386115:1
so has part: feature:385681-386115:1:exon
subclass of: SO_0000010

position:385681:1
position: 385681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386115:1
position: 386115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385681-386115:1:exon

TPCCA_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01790
old locus tag: TPCCA_0366
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945026.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MISKQDFPTINDRVPAGQKPNGAPYRVLVVDDSMFVSKQIGQILTSEGYEVADTAVDGVDGVEKYKAMSPGVDLVTMDITMPKMGGITALEKILEFDKNAKVVIISALGKEELVKKALLLGAKNYIVKPLDRKKVLERIASVLK
SIO_010081: TPCCA_RS01790
subclass of: SO_0000673
so part of: TPCCA_RS01790
location: 385681..386115
location: region:385681-386115:1
so has part: feature:385681-386115:1:exon

WP_013945026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385681-386115:1:exon

TPCCA_RS01800
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01800
old locus tag: TPCCA_0367
so part of: sequence
location: 386419..389244
location: region:386419-389244:1
so has part: feature:386419-389244:1:exon
subclass of: SO_0000010

position:386419:1
position: 386419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389244:1
position: 389244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386419-389244:1:exon

TPCCA_RS01800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01800
old locus tag: TPCCA_0367
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342396.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MLFLKTLEVFGFKSFADRVRVEFADGVTALLGPNGCGKSNVVDAIKWVLGEQSSRALRADRMEDVIFNGTESRRSLNVAEASLTVCDEAGILSLDVPEILIKRRLYRSGESEYFLNGNAVRLKEIRELFWDTGIGKVAYSVMEQGKIDQILSNKPEERRYLFEEAAGVTRFKVRGAEAARKLEKTAENLRHLEVILQEVEKSYESSKLQAAQTQRYRMLKEEIFARDRDLGLLRLRGFLENQARADGALQRNRARRDALQTQVEEAQQTLSARIGEINDMEKRVDALQKEIYGLAIEQKAKQNEASLHRKHLSELKESIGQIEMRKIGVESRVQDLEEEVAEQDAHVYQLGSALSSVEEHIESFARSLHVASEHVSENDQTLRDIQGQMQEISAACVELEASLRGVAEDIAAELDTRLSAAGYSARNRAEAERTLVAGVQRLRTFVEGRARIVSDFLVVDTHTEGELCRMLTTVVDAFNEAVKIVHCVEADIAEYARVSARFIDEFVAPQGIMTKKREFERQLEQHHAQLERHAARQRTLQEENKLLVGKIEACRKTLESLRVDQARLRAEAEAGQKQAAGTRGEVARQRTLQEELEGELFTEGERVAALEERLLEIEGEIGQLEQRGVLLTKSLENCEGEIRVRNAAVTSEERALQEARVELAQVGRQLEQAHRELMQCETEIRNLREHFREQHTRDLSEFEDLIPGIEKTASDLRQERGELQARVKEIGAVNFMAVEEFQEVKERYEFLVAQVADLEKARADLQRVTDKIKAESAELFLATYRRIRKNFHEVFRRLFGGGRAEIRLSDPAAVLSCGIEILAQPPGKKLEHIGLLSGGEKAMTAVALLFATYMVKPAPFCLLDEIDAALDEHNVARFVGMLDEFSDVSQYIVITHNRRTVLGARTMLGVTMEEPGVSKVVSIALESASERPANGEARGAI
SIO_010081: TPCCA_RS01800
subclass of: SO_0000673
so part of: TPCCA_RS01800
location: 386419..389244
location: region:386419-389244:1
so has part: feature:386419-389244:1:exon

WP_013945028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386419-389244:1:exon

TPCCA_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01805
old locus tag: TPCCA_0368
so part of: sequence
location: 389244..389579
location: region:389244-389579:1
so has part: feature:389244-389579:1:exon
subclass of: SO_0000010

position:389579:1
position: 389579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389244-389579:1:exon

TPCCA_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01805
old locus tag: TPCCA_0368
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881816.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLRGVAGALLGAVVLVALGLMGVWWVFYPKKGDRGTAVAREPVLLHIDPAQMEAADEPLTLPPIERSRERMSAWSEQECLRQLEYPTEKAVQALEHANEKRIQQMLEAVP
SIO_010081: TPCCA_RS01805
subclass of: SO_0000673
so part of: TPCCA_RS01805
location: 389244..389579
location: region:389244-389579:1
so has part: feature:389244-389579:1:exon

WP_013945029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389244-389579:1:exon

TPCCA_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: bamD
locus tag: TPCCA_RS01810
old locus tag: TPCCA_0369
so part of: sequence
location: 389576..391114
location: region:389576-391114:1
so has part: feature:389576-391114:1:exon
subclass of: SO_0000010

position:389576:1
position: 389576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391114:1
position: 391114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389576-391114:1:exon

TPCCA_RS01810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: bamD
locus tag: TPCCA_RS01810
old locus tag: TPCCA_0369
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342398.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor BamD
translation: MSVWVALALLGMCVSCTHVPPPRALIVSKEPPPALDSAPRPTIAEAVPLPSPVEEEIAGRLPPAPERVPESSQEREQKPESSKPQVVEPVSLASPVKPRETGSVPDVLPVPEVSSPHVAPPAPPAPTAPRPHRPSPPPVSPSASKPKQRAVPASPPPASEPPREAEVQAEPEPAEDSPRAMVPEEPPEDEVPRVSRAVQLAVGQKLEVLYPGEGWVYVGEHTAQPGLRYHQRKLEESHSLFTFSAEREGDFVLAFSYFDVFRDDFVSDALAVKVVPKREGLARVVRAPEYRRTVSSPPDTVVSELSPAGTGTERRAEESGTSGSQRAAAHTGAPVRQDQTDTAVAEKAQHGTPRPDEKKDREPTVGGRDPVPSDAVAQGVSERYSPRKISPASQPSAPSAAPIEAHVPASAHKEGQEKRDHLAEARQFCAQGNARDALASLGDFFAQFPSHERMDEAWFLRGQAYEINGAQRNVRLALEAYKTILERFPHSPYWKKADERARFIKNFFIKIS
SIO_010081: TPCCA_RS01810
subclass of: SO_0000673
so part of: TPCCA_RS01810
location: 389576..391114
location: region:389576-391114:1
so has part: feature:389576-391114:1:exon

WP_013945030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389576-391114:1:exon

TPCCA_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01815
old locus tag: TPCCA_0370
so part of: sequence
location: complement(391182..391643)
location: region:391182-391643:-1
so has part: feature:391182-391643:-1:exon
subclass of: SO_0000010

position:391182:-1
position: 391182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391643:-1
position: 391643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391182-391643:-1:exon

TPCCA_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01815
old locus tag: TPCCA_0370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881818.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAQTQRLHPPFYDKRTQRVNSPFSLPAPKTQEKKYLCLLGTVDSVCAPLYDPPLAFTIPQAEVSHMNERNKLLARALYSCVPHVQGSDDYEDDFEDSDFQDGDFDDFEDEDGFDDDDDFEDSDDDKVDFEDDDFEDDDFEYEDEDNDLDFDE
SIO_010081: TPCCA_RS01815
subclass of: SO_0000673
so part of: TPCCA_RS01815
location: complement(391182..391643)
location: region:391182-391643:-1
so has part: feature:391182-391643:-1:exon

WP_041609991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391182-391643:-1:exon

TPCCA_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01820
old locus tag: TPCCA_0371
so part of: sequence
location: 391656..392492
location: region:391656-392492:1
so has part: feature:391656-392492:1:exon
subclass of: SO_0000010

position:391656:1
position: 391656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392492:1
position: 392492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391656-392492:1:exon

TPCCA_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01820
old locus tag: TPCCA_0371
EC number: 2.7.1.148
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342400.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
translation: MHLWVGARRADGLHSIESVMQRITLADSLSLSRLDIPGRCEVCSPYMALPRENTLTRAYARFCQVTGVHDGVRVRVVKRIPAGSGLGGGSADAAALLCGLDTLFGTTLSARVLREVAYSVGSDVPFFLASQAACVLGGGEQLVPLVPKTGYLGLLVWPGLHSGSAQAYEDLDRLRACGVHAADGEQYSLRGATALSAHYAQDCARWRFFNSLDTPVQRRYPVIALARWDLARAGACFTAMSGSGSAVFGLYRDEEELRRAHKLLAKRWCWCVRVRLCR
SIO_010081: TPCCA_RS01820
subclass of: SO_0000673
so part of: TPCCA_RS01820
location: 391656..392492
location: region:391656-392492:1
so has part: feature:391656-392492:1:exon

WP_245522182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391656-392492:1:exon

TPCCA_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01825
old locus tag: TPCCA_t0018
so part of: sequence
location: 392501..392573
location: region:392501-392573:1
so has part: feature:392501-392573:1:exon
subclass of: SO_0000663

position:392501:1
position: 392501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392573:1
position: 392573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392501-392573:1:exon

TPCCA_RS01825
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS01825
old locus tag: TPCCA_t0018
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:392533..392535,aa:Gln,seq:ttg)
SIO_010081: TPCCA_RS01825
subclass of: SO_0000673
so part of: TPCCA_RS01825
location: 392501..392573
location: region:392501-392573:1
so has part: feature:392501-392573:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:392501-392573:1:exon

TPCCA_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01830
old locus tag: TPCCA_0372
so part of: sequence
location: 392614..393204
location: region:392614-393204:1
so has part: feature:392614-393204:1:exon
subclass of: SO_0000010

position:392614:1
position: 392614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393204:1
position: 393204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392614-393204:1:exon

TPCCA_RS01830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01830
old locus tag: TPCCA_0372
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945033.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L25/general stress protein Ctc
translation: MDERRLKGKRRVQLGKYAAVRGRKEGRLPAVMYDHRGVSVPLELAQQDFDRLFRALTRSTVLSLELDGGEVFCVFVKDYQHNMVSDRVEHVDFYAVEESVPLRMRIRLQLCGSPEGVRYGARLEKGLSYIEVESLPRNLPDRVVLDISGLGAGDVRRVRDVPLPASVAVLSDPDAVIVALSSSASEAGSPAGARTG
SIO_010081: TPCCA_RS01830
subclass of: SO_0000673
so part of: TPCCA_RS01830
location: 392614..393204
location: region:392614-393204:1
so has part: feature:392614-393204:1:exon

WP_013945033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392614-393204:1:exon

TPCCA_RS01835
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: tilS
locus tag: TPCCA_RS01835
old locus tag: TPCCA_0373
so part of: sequence
location: 393264..394697
location: region:393264-394697:1
so has part: feature:393264-394697:1:exon
subclass of: SO_0000010

position:393264:1
position: 393264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394697:1
position: 394697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393264-394697:1:exon

TPCCA_RS01835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: tilS
locus tag: TPCCA_RS01835
old locus tag: TPCCA_0373
EC number: 6.3.4.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881821.1
GO function: GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA lysidine(34) synthetase TilS
translation: MSESRQKLHPLLVHVARSFGHFLVPRKPSCLLVAVSGGADSLALLYAAHELAPDFGVCACAVTVDHSLRAQEGALDARFVRALCARFSPPLPCFVQQISAGAVHACAKIRGRGVQDAARALRYKVFDHVAARCGAQVVLTAHTRDDQYETLLMRLFQGAAASALQGIRAARGRYVRPLLKVSRTCVEDFLQTRGVRWREDTSNTCRKYVRNRIRHELIPALDAVLAGWRSGLDKTFAGISAEHSFCVAALTRWREGCSHAWEPVPRALGTRLRMPRSDFLAAEFILRFFLLQEACVRLGVSHRVPRGALERCARFDGVRRIHVSGLQLERAGAYVLFSCIHASDIARETKKQDTGSPPSSEKQGVSAIYVARPGAYLCACGTLLVEVRPAGVFVCCAQDRVGVGPFSFPFYIRTHRTGDTISIRGGHKGIRKMFSEWHVPLSDRTVLPMIEQDGVLRALYGAALGYQNRYAERTPHE
SIO_010081: TPCCA_RS01835
subclass of: SO_0000673
so part of: TPCCA_RS01835
location: 393264..394697
location: region:393264-394697:1
so has part: feature:393264-394697:1:exon

WP_013945034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393264-394697:1:exon

TPCCA_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01840
old locus tag: TPCCA_0374
so part of: sequence
location: 394690..397008
location: region:394690-397008:1
so has part: feature:394690-397008:1:exon
subclass of: SO_0000010

position:394690:1
position: 394690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397008:1
position: 397008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394690-397008:1:exon

TPCCA_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01840
old locus tag: TPCCA_0374
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505480.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MSKGMCPRMGRLCAVSIFCAFSGIQDASCVSEPAPPQDLERNHPGVAARYLQEGRWQEALSQAEQGVASAPQIADFLFIAARASYALRQPRARALQWMARAVAKDMQWCVYDIEEVRLFYARLCVDTLQHARALELLATAEQVSADADWLRARARYGLGQVEHAQELIEKALERWALDARFAKLFFAQERSRRPSSRSKKIADSILSRLSVWQEQDPSLLVEAALFEPRTNMAFRYLQTYFTLRPLDAPGESSAQSSYEQSTRAGDSAPEQELYARAQSIVLGLQYGVLDEQRAMEMFCTLNSPLAVPAVDPTDDVSSFGVHASSVSSSTPLQRVVVLYADLLHEFSRLLASRPIRARFVRFLAEFEGVLYTDENRDGIVSARVFFKAGRPRRAQFDTNQDGILEYEVYANDGAPTCVHTMHSTQKTELSRASVFPIPQNIAAHDHERAAERWIAPRVSLPADNGVEGETQAHVPLTQQGYRVCYDRYPEVHQVGWEDKTYVLRPRALRWQPVRMQSLDLARDLEGVRSHDFFTMILTNEPLPTEQQITVSSLYYEKPDSLFERARVRTYLDEGLPLFSETHVGSRFRARTHYVDGRATRRDSDRDDDGFFETREYYNAQGAVRALSVDVHKDRSFAYQEEYGAKGQKVQKWYGRGRVTISHTELPTGHARTEWLHPVTGRHVTVDFVQGVPKRLLVDGEVHTLTKDPRNAALYWVRRIPRNGDEVGQRIVESFRAATSPVVSEYFRTGGSVVRAVRSGGVVFAEELEPGKE
SIO_010081: TPCCA_RS01840
subclass of: SO_0000673
so part of: TPCCA_RS01840
location: 394690..397008
location: region:394690-397008:1
so has part: feature:394690-397008:1:exon

WP_245522183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394690-397008:1:exon

TPCCA_RS05635
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05635
so part of: sequence
location: complement(397049..397195)
location: region:397049-397195:-1
so has part: feature:397049-397195:-1:exon
subclass of: SO_0000010

position:397049:-1
position: 397049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397195:-1
position: 397195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397049-397195:-1:exon

TPCCA_RS05635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05635
inference: COORDINATES: protein motif:HMM:NF024705.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSKREETDAIHLLSQMGTFLITRAEDRVSHYFGISKYTLYSCIETGKS
SIO_010081: TPCCA_RS05635
subclass of: SO_0000673
so part of: TPCCA_RS05635
location: complement(397049..397195)
location: region:397049-397195:-1
so has part: feature:397049-397195:-1:exon

WP_245522211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397049-397195:-1:exon

TPCCA_RS05640
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05640
so part of: sequence
location: 397167..397376
location: region:397167-397376:1
so has part: feature:397167-397376:1:exon
subclass of: SO_0000010

position:397167:1
position: 397167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397376:1
position: 397376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397167-397376:1:exon

TPCCA_RS05640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881823.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASVSSLLLMSATGFPTLSTDSSVRSSRNALTLLRWICEAVSAVVPVSRPSANCVTCKAAISKFIARIA
SIO_010081: TPCCA_RS05640
subclass of: SO_0000673
so part of: TPCCA_RS05640
location: 397167..397376
location: region:397167-397376:1
so has part: feature:397167-397376:1:exon

WP_245522212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397167-397376:1:exon

TPCCA_RS05645
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05645
pseudo: true
so part of: sequence
location: complement(<397391..397438)
location: region:397391-397438:-1
so has part: feature:397391-397438:-1:exon
subclass of: SO_0000010

position:397391:-1
position: 397391
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:397438:-1
position: 397438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397391-397438:-1:exon

TPCCA_RS05645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05645
inference: COORDINATES: protein motif:HMM:NF019947.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: TPCCA_RS05645
subclass of: SO_0000673
so part of: TPCCA_RS05645
location: complement(<397391..397438)
location: region:397391-397438:-1
so has part: feature:397391-397438:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397391-397438:-1:exon

TPCCA_RS05720
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05720
pseudo: true
so part of: sequence
location: complement(<397501..397659)
location: region:397501-397659:-1
so has part: feature:397501-397659:-1:exon
subclass of: SO_0000010

position:397501:-1
position: 397501
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:397659:-1
position: 397659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397501-397659:-1:exon

TPCCA_RS05720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05720
inference: COORDINATES: protein motif:HMM:NF019947.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: PAS domain-containing protein
SIO_010081: TPCCA_RS05720
subclass of: SO_0000673
so part of: TPCCA_RS05720
location: complement(<397501..397659)
location: region:397501-397659:-1
so has part: feature:397501-397659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397501-397659:-1:exon

TPCCA_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01850
old locus tag: TPCCA_0376
so part of: sequence
location: complement(397692..398588)
location: region:397692-398588:-1
so has part: feature:397692-398588:-1:exon
subclass of: SO_0000010

position:397692:-1
position: 397692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398588:-1
position: 398588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397692-398588:-1:exon

TPCCA_RS01850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01850
old locus tag: TPCCA_0376
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342794.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTSLLLSVCAAAALSGCATGQSDAVTDPLSVLEVSQTETREALMLFVPYNETGASVTIFTPELVARLSKSYRFLRVEAPHSAYTLSPEARERNRLLFSEYEVDGLPFLVLQSAQGDAYFAQRIHSTLSSEQELWALIRSADASRKKVLAARDRIAQTEAAEKAIAIDAFLKTVRYPRSARYDALRKEALQADHENVSGLHGDYMFHLARRRAEKFIKQENLVAAGNAYKDLAQSPFLSASQKQEAWYLTAYTYALSEKVSTEDVVACLRKAVAAHPHAARVAQIKQTIKKLLTERGI
SIO_010081: TPCCA_RS01850
subclass of: SO_0000673
so part of: TPCCA_RS01850
location: complement(397692..398588)
location: region:397692-398588:-1
so has part: feature:397692-398588:-1:exon

WP_245522184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397692-398588:-1:exon

TPCCA_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01855
old locus tag: TPCCA_0377
so part of: sequence
location: 398691..399170
location: region:398691-399170:1
so has part: feature:398691-399170:1:exon
subclass of: SO_0000010

position:398691:1
position: 398691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399170:1
position: 399170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398691-399170:1:exon

TPCCA_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01855
old locus tag: TPCCA_0377
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505481.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal body protein FliL
translation: MTEETAQRVIRALRTIAALIVCVLLLGTCGAFRVRTHSAPRETQTRRTTRGIAQRESAHAVYAELGRLRALSADKQPVSVIITPLLQYPAADHALYEELVQKKEQLRRASLAWCAQHTAQELHMLGPEQLKIALRDALNTQLSLGRVTRVFLEEFIILF
SIO_010081: TPCCA_RS01855
subclass of: SO_0000673
so part of: TPCCA_RS01855
location: 398691..399170
location: region:398691-399170:1
so has part: feature:398691-399170:1:exon

WP_245522185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398691-399170:1:exon

TPCCA_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: secA
locus tag: TPCCA_RS01860
old locus tag: TPCCA_0379
so part of: sequence
location: complement(399245..401995)
location: region:399245-401995:-1
so has part: feature:399245-401995:-1:exon
subclass of: SO_0000010

position:399245:-1
position: 399245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401995:-1
position: 401995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399245-401995:-1:exon

TPCCA_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: secA
locus tag: TPCCA_RS01860
old locus tag: TPCCA_0379
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945039.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecA
translation: MLVRTALRLIFGSQHERDLKNLLPLLNAVNAQESWVLPLQESEFKQKTAEFKARAAAGEALDAFLPQAFALAREAARRVLGERPYDVQILGSLVLHHGKIVEMKTGEGKTLMSVAAAYLNSLSGRGVHIVTVNDYLAERDARWMRPVYDYLGVSVGVILSSMGSQERRCAYACDITYGTNNELGFDYLRDNMQFLTEEKTQRDFYFAIIDEIDSILIDEARTPLIISGPAENDTQHYAEVDRLVGQLQEVERNPATGDYPNEVDGEEVRGDYIVDEKNRKVSFSGPGMLHIQDVLTHAGLIQGSLFDEENFKYIHYFTQALRAHLLYRADVDYVVKDGQVQIVDEFTGRILEGRRYSDGLHQAIEAKEHIRIAQRNRTMATITFQNFFRMYKKLSGMTGTADTEALELNKIYKLEVVVLPTNLPVARVDEHDVVYLSEEEKWSAICDEIKEAHTRGQPVLVGTISIEKSEKLSALLRTRGVKHEVLNAKSHAREALIIAEAGAKGSVTIATNMAGRGTDIKLGGNPEFRARQSAAAIASKHGSSSVTVREYMQACYEAEYTRWRADYEEVKQLGGLYVIGTERHESRRIDNQLRGRSGRQGDPGRSKFFLSLDDDLMRIFGGERLKRFMSRVGMEPGEPITHSWLNKSIERAQTKVEARNFDVRKHLLEYDDVLNEQRSFIYAQRAQILIDEHVVERVYTTIEEYLNREITALRQELKRRGRLSLGAFQQNLSTLFDYALGGEDASGWNETRLGTLKQEILAHLKKNIESKYLLAGAQNMDTFIRYQYVQAIDKKWLDHLELLESLRESVYLRSYGQKNPLTEYKLEGFDLFYTMLDDIRLSIASQVVRVTVHMEEQRVPRPPHVAQAAHEFQALGQPGRGHGALSALPIQAGAKVGRNTPCPCGSSKKYKHCCGR
SIO_010081: TPCCA_RS01860
subclass of: SO_0000673
so part of: TPCCA_RS01860
location: complement(399245..401995)
location: region:399245-401995:-1
so has part: feature:399245-401995:-1:exon

WP_013945039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399245-401995:-1:exon

TPCCA_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01865
old locus tag: TPCCA_0380
so part of: sequence
location: complement(402099..403919)
location: region:402099-403919:-1
so has part: feature:402099-403919:-1:exon
subclass of: SO_0000010

position:402099:-1
position: 402099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403919:-1
position: 403919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402099-403919:-1:exon

TPCCA_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01865
old locus tag: TPCCA_0380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945040.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MTSVPKPLIIQADRSILLDVHAPEAVAARKALVSFAELEKSPEHLHSYRLTPLSLWNAASAGFSPQMIAQTLTRFSRFTPPQTVLDWVVDIMSRYGKIRLREDATHSTLLRLQVRDAHIAREIAASKSLASHLSPTTACLQDGPLPTPDTVRTAQPDTTPQVQGAQTGCSCDFLLPRLHRGTVKQLLLRHGWPVHDEVPLREGTPLSLRLRISPASCLPPSTAYPCCHTPGTPSFVPRDYQWEAADAFVGNRTQGSGFGVVVLPCGAGKTVVGLLVMGLLQTDTLILTPNSAAAQQWKRELCEKTDLDGTSIGIYSGECKEIRPVTIATYQILTWRAHADAPFSHFRLFMERSWGLIIYDEVHLLPAPLFRITAELQVVRRLGLTATLVREDGCAQDVFSLVGPKRYDVPWKDLEARGWIARVRCVEVRVTMDQSLQYQYMTAPVRLRHRLASENEAKVAVVQRLLRAHAGAPTLIIGQYVQQLLHLAHVLQVPLVSGRQTYAAREAIYQRFREGTLQVLVVSKVANCALDLPDASVAIQVSGTFGSRQEEAQRLGRLLRPKICDAHFYSLITEQTVEEDCALRRQRFLVEQGYTYETLRVSEVHE
SIO_010081: TPCCA_RS01865
subclass of: SO_0000673
so part of: TPCCA_RS01865
location: complement(402099..403919)
location: region:402099-403919:-1
so has part: feature:402099-403919:-1:exon

WP_013945040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402099-403919:-1:exon

TPCCA_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01870
old locus tag: TPCCA_0381
so part of: sequence
location: complement(404059..404775)
location: region:404059-404775:-1
so has part: feature:404059-404775:-1:exon
subclass of: SO_0000010

position:404059:-1
position: 404059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404775:-1
position: 404775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404059-404775:-1:exon

TPCCA_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01870
old locus tag: TPCCA_0381
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881829.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR02206 family membrane protein
translation: MLGAELADAGLFVRFGALHFAIASVAVLLSALFVLLPFALPRLLAHKNLARAGVAILFLRLGLMLCSTLLDGRSWRNELPFHLCTAALISGSLYFITRRPIFFNLLYFWHLGSFVAVIYPDFTRVHTILYAYLFMLTHCLEPAMVVFSLLHLRERISKRGLQCAVLGFLLLATNALFWNRRLGANYLFISRYQLEILRVIRPFFVYQLLFVSALCLLMLVLYLPFRPRQHGRNQLFVI
SIO_010081: TPCCA_RS01870
subclass of: SO_0000673
so part of: TPCCA_RS01870
location: complement(404059..404775)
location: region:404059-404775:-1
so has part: feature:404059-404775:-1:exon

WP_013945041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404059-404775:-1:exon

TPCCA_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: mraZ
locus tag: TPCCA_RS01875
old locus tag: TPCCA_0383
so part of: sequence
location: 405004..405453
location: region:405004-405453:1
so has part: feature:405004-405453:1:exon
subclass of: SO_0000010

position:405004:1
position: 405004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405453:1
position: 405453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405004-405453:1:exon

TPCCA_RS01875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: mraZ
locus tag: TPCCA_RS01875
old locus tag: TPCCA_0383
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881831.1
GO function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0051302 - regulation of cell division [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: division/cell wall cluster transcriptional repressor MraZ
translation: MEDSAFTGAYSYNLDEKGRLMLPARLRVALSDTRLVLTCAIESCLWVFPRAQWDRFSSQISARASLFHAPSRAVLRRLIAPAQEVELDRAWRLFIPPSLREYAALEKDCLILGLSHCLEIWDRARYRAYLAESEADFRAGTETLQDLCL
SIO_010081: TPCCA_RS01875
subclass of: SO_0000673
so part of: TPCCA_RS01875
location: 405004..405453
location: region:405004-405453:1
so has part: feature:405004-405453:1:exon

WP_013945042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405004-405453:1:exon

TPCCA_RS01880
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rsmH
locus tag: TPCCA_RS01880
old locus tag: TPCCA_0384
so part of: sequence
location: 405450..406589
location: region:405450-406589:1
so has part: feature:405450-406589:1:exon
subclass of: SO_0000010

position:405450:1
position: 405450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406589:1
position: 406589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405450-406589:1:exon

TPCCA_RS01880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rsmH
locus tag: TPCCA_RS01880
old locus tag: TPCCA_0384
EC number: 2.1.1.199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945043.1
GO function: GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
translation: MSLSGHTHTKEEVQAEVEAGEVQCPALCHQPVLVQECLTLLEPAIVGISQGADSTRDGAGAFFIDGTLGDGGHTQAFLHAYPALRALGVEIDPSMLARARARLTPFGKRLRYVLGWSDVFFASAYASAPASLATGRTAAGAAGVPGAYPAPQAVLLDLGISFFHYRGAMRGFSFAEEHMLDMRLDPQDSQTAADLLNRLPQARLAQLFFEGGEERYARRIAQAVCAQRRQAPFCSARAFAEVVARVVPPMRTARFGKRRGVLGVLPKLHPATKAFQALRIAVNRELERLPRLLTAAFTALAPGGRLAVISFHSREDRIVKVHFRHWAKRCSCPARVPICSCGGVARASLITKKPLVPSCVERAANAASRSATLRVIEKR
SIO_010081: TPCCA_RS01880
subclass of: SO_0000673
so part of: TPCCA_RS01880
location: 405450..406589
location: region:405450-406589:1
so has part: feature:405450-406589:1:exon

WP_013945043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405450-406589:1:exon

TPCCA_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01885
old locus tag: TPCCA_0385
so part of: sequence
location: 406680..406976
location: region:406680-406976:1
so has part: feature:406680-406976:1:exon
subclass of: SO_0000010

position:406680:1
position: 406680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406976:1
position: 406976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406680-406976:1:exon

TPCCA_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01885
old locus tag: TPCCA_0385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002668438.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein FtsL
translation: MSALFFTVSIPVLLCAGVWQASRYQAVERVVREYDAEQHRVIAENKRKISGIAILSKPDRIEKLAVEKLHLHRASHAEIVRIKLRPAHKDSSPHASEF
SIO_010081: TPCCA_RS01885
subclass of: SO_0000673
so part of: TPCCA_RS01885
location: 406680..406976
location: region:406680-406976:1
so has part: feature:406680-406976:1:exon

WP_245522186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406680-406976:1:exon

TPCCA_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01890
old locus tag: TPCCA_0386
so part of: sequence
location: 406960..408339
location: region:406960-408339:1
so has part: feature:406960-408339:1:exon
subclass of: SO_0000010

position:406960:1
position: 406960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408339:1
position: 408339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406960-408339:1:exon

TPCCA_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01890
old locus tag: TPCCA_0386
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881834.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
translation: MLLSFDEVCAAVQGARVCDARGARGFDGVSFDSRAVVPRDLFIPLRGVHVDGHTFIEEALQKGAVATLIDQRYPHAGEYVAWCTRFGAACIAVHDTLRALQDLASFYCKKFPALIRIGITGSSGKTTVKEMARAVFSERYRVVATPGNLNSEIGLPQSLFFVRAEHEVGIFELGMNRRGEMRTLAQILVPHYAIITNVGCAHVGILGTQQAIAEEKKEIFSQFTEHSVGFVPDDAYRVFLSNIPYGRVVVYDQGGRGLATEVIDEGLRGSRVLYQGRWIRVPLPGVHNAKNALAVIALAAQVGLPAEEIQRGMERVKPPFGRSHVVCASLTFLLDCYNANPDSMAAALHLCARISAVSKVYVLGDMGELGVTAAEAHYRVCVLAAASDARAVYVFGPEFCRAVRKVSWGRKRVYAFALEELSALQETLDAQLRRGDFVLVKGSRSVALERLEPLLRKER
SIO_010081: TPCCA_RS01890
subclass of: SO_0000673
so part of: TPCCA_RS01890
location: 406960..408339
location: region:406960-408339:1
so has part: feature:406960-408339:1:exon

WP_013945045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406960-408339:1:exon

TPCCA_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: ftsW
locus tag: TPCCA_RS01895
old locus tag: TPCCA_0387
so part of: sequence
location: 408345..409490
location: region:408345-409490:1
so has part: feature:408345-409490:1:exon
subclass of: SO_0000010

position:408345:1
position: 408345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409490:1
position: 409490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408345-409490:1:exon

TPCCA_RS01895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: ftsW
locus tag: TPCCA_RS01895
old locus tag: TPCCA_0387
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881835.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative lipid II flippase FtsW
translation: MISIEKNVHQERYSFVFILLVALMVGVGFVTLYSGSVHYAQRFFRYPGYFLVRQGVSIGIGLVCLLFFTFVRLASLRKALSPLILVAFALCVCTFFPGIGSTRNGATRWIKVFDINFQPSEFVKLVLIVFLANFFDKHREHFDTPIRSIFPPFVVSAIFVSVVFFQNDFSTAMFLLFITVVMFFIAGAPLWWFLRGIVVLAPIAVLMIVTSTNRLRRVLSFLYPDRDPLGAGYQVNAALEALMDGGLWGRGIGNGVRKIASVPEVYSDFIFVVIGEEMGFIGVCLYLMLLFAFTLTGISIALRCANRFNTFLAFGASAAIVLQSILNVAVVVRLVPATGIPLPFFSSGGSSIVVTLSLCGLIINVSGDEKIRREREETVFV
SIO_010081: TPCCA_RS01895
subclass of: SO_0000673
so part of: TPCCA_RS01895
location: 408345..409490
location: region:408345-409490:1
so has part: feature:408345-409490:1:exon

WP_245522187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408345-409490:1:exon

TPCCA_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01900
old locus tag: TPCCA_0388
so part of: sequence
location: 409468..410283
location: region:409468-410283:1
so has part: feature:409468-410283:1:exon
subclass of: SO_0000010

position:409468:1
position: 409468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410283:1
position: 410283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409468-410283:1:exon

TPCCA_RS01900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01900
old locus tag: TPCCA_0388
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945047.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein FtsQ/DivIB
translation: MKKQFLCRNTEACKYPLVGYMSMRVRVAVLKVVIVILLLVLCVEFVFYLFVVPATSFAKVEFSGNMTMSPEYLMKAAGLTGKEKWMSLNGFTISERLASVPLLAQVEVLKKFPDTVHVHVVERVAIALGFVHVQGRAMPVQIDKTGTVFSVGTAPLDTVLPVVSGLEFRNPRVGLRVHDQLVPLFVQLDNLSKRNPLLLGEISEISIEQKRHGGYDLALYLVRAPIRVRMDKNLSEEKLRYVILLVDALREWQTQRRIKELDVRGGTAVYR
SIO_010081: TPCCA_RS01900
subclass of: SO_0000673
so part of: TPCCA_RS01900
location: 409468..410283
location: region:409468-410283:1
so has part: feature:409468-410283:1:exon

WP_013945047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409468-410283:1:exon

TPCCA_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: ftsA
locus tag: TPCCA_RS01905
old locus tag: TPCCA_0389
so part of: sequence
location: 410296..411540
location: region:410296-411540:1
so has part: feature:410296-411540:1:exon
subclass of: SO_0000010

position:410296:1
position: 410296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411540:1
position: 411540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410296-411540:1:exon

TPCCA_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: ftsA
locus tag: TPCCA_RS01905
old locus tag: TPCCA_0389
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460545.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein FtsA
translation: MGEVIVGLDIGTESIRAVVAERLEGGALQVVGVGVGHSKGLRRGVVVNIENTVVGIHHAVEAAEMMSGIEIAHCVVGLGGTHIEGRNLKGVVAVADKGKGHREVDQSDIDRVLEVACAVSLPPDRKILHVIPKVYSVDDQHGITDPRNIIGVRLEGEVHMITGSATCMRSVIDCVKRANLHIDFLMHNGLAAVRSVLNDDERNVGCVLINIGGGTTDVIAMYKGSPVLITSIPVGGSQVTSDLAKVKNLPLETAERIKIKDGCCWIPLLEGEGSVLISSQGNRIPVEISKREIAEIIEARMCEVFTIVRDRLSTVETQSGRGIIENIILCGGGAQLTGAVELASAIFDTPRVHLGIPGTLGGLAGEYRSPEFAVVLGLILEYTYKQGQRAYQGRAEMERAGVFTKVKDIWRNLF
SIO_010081: TPCCA_RS01905
subclass of: SO_0000673
so part of: TPCCA_RS01905
location: 410296..411540
location: region:410296-411540:1
so has part: feature:410296-411540:1:exon

WP_013945048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410296-411540:1:exon

TPCCA_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: ftsZ
locus tag: TPCCA_RS01910
old locus tag: TPCCA_0390
so part of: sequence
location: 411586..412842
location: region:411586-412842:1
so has part: feature:411586-412842:1:exon
subclass of: SO_0000010

position:411586:1
position: 411586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412842:1
position: 412842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411586-412842:1:exon

TPCCA_RS01910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: ftsZ
locus tag: TPCCA_RS01910
old locus tag: TPCCA_0390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881838.1
GO function: GO:0003924 - GTPase activity [Evidence IEA]
GO process: GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein FtsZ
translation: MMNIELAPSGEEFTLSPTVIKVIGAGGGGSNAVNRMMSCGLQCVEFIAANTDVQALSYSTAPKKLAIGTKVTRGLGAGGDPEIGEKAAMEDAEAIASALQGANMVFITAGMGGGTGTGAAPVIAKIARELGALTVAVVTKPFRFEGRAKMMLAERGIEKLRTHSDTVIVIPNQNLLSVVDKRCPIKETYLVADDLLRKSVQSISDLITLPGEVNLDFMDVKNTMEGQGYALIGVGEGEGENRAVDAATAAINNPLLEETRIEGATRLLVAVRGSENLSMGEVDGVMSVVAKTIDPDAIIIHGTSIDASMQDRVRVTVIATGVPQASISIAGDTHSSQKIKTSSYGAVSTGVYISSDEWNRAKSSKQPNLPGLATRNSAVQETRMEKNGVKGHTFGVPLPSVNEDLDEPTFLRNRNKGL
SIO_010081: TPCCA_RS01910
subclass of: SO_0000673
so part of: TPCCA_RS01910
location: 411586..412842
location: region:411586-412842:1
so has part: feature:411586-412842:1:exon

WP_010881838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411586-412842:1:exon

TPCCA_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01915
old locus tag: TPCCA_0391
so part of: sequence
location: 412839..413759
location: region:412839-413759:1
so has part: feature:412839-413759:1:exon
subclass of: SO_0000010

position:412839:1
position: 412839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413759:1
position: 413759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412839-413759:1:exon

TPCCA_RS01915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01915
old locus tag: TPCCA_0391
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945049.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific tyrosine recombinase
translation: MKDVDIRVQSFYAYLISAEAHALLTAQTYVTTLMLFQKSLDPPCNIESANAHDCVRFIEKRSAAGVSGKTIAKDMAALHAFYQFLILEQVRPDNPMQDVDAPRRAYSLPRVLSPEQVNTFLQSIPLCTPGGVRDRALFELIYAAGLRVSEAVSLSLSDIFFAERLLKVTGKGNRERMAPFGEQACYFLMQYIREARVRFTSAKHPENSEKKGAVFLNRQGGRLSRKGIWKRLQDIEIRSGVETHVHTFRHSYATHLLAGGVDLHSVQCLLGHADIATTQVYTHVENGQLEACHRACFSSEGLRDEN
SIO_010081: TPCCA_RS01915
subclass of: SO_0000673
so part of: TPCCA_RS01915
location: 412839..413759
location: region:412839-413759:1
so has part: feature:412839-413759:1:exon

WP_013945049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412839-413759:1:exon

TPCCA_RS01920
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01920
old locus tag: TPCCA_0392
so part of: sequence
location: 413749..414501
location: region:413749-414501:1
so has part: feature:413749-414501:1:exon
subclass of: SO_0000010

position:413749:1
position: 413749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414501:1
position: 414501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413749-414501:1:exon

TPCCA_RS01920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01920
old locus tag: TPCCA_0392
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945050.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MKTRRCASYVGGALCAAFFFFHSCKERRTVQRVQDLEKGVPHPTSIEELRRAVKLHEQRLERLHAVQDQVGVWYKMLALRYFDRKMYTHALDAFTQAITFAPENKHLFFYQALCAAYAAKYVAPIDPEKKMQQQAAYRALAVSAYVRALSLDAQYSHALYGLSVLYVFELNQPQNAVPHLQKLLELKENTEAALFVLARAYYTLGRYAQAIECYDRILVQSSDSHQRDRARQNKELVTNVSQRATRGDRG
SIO_010081: TPCCA_RS01920
subclass of: SO_0000673
so part of: TPCCA_RS01920
location: 413749..414501
location: region:413749-414501:1
so has part: feature:413749-414501:1:exon

WP_042491875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:413749-414501:1:exon

TPCCA_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: dprA
locus tag: TPCCA_RS01925
old locus tag: TPCCA_0393
so part of: sequence
location: 414498..415406
location: region:414498-415406:1
so has part: feature:414498-415406:1:exon
subclass of: SO_0000010

position:414498:1
position: 414498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415406:1
position: 415406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414498-415406:1:exon

TPCCA_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: dprA
locus tag: TPCCA_RS01925
old locus tag: TPCCA_0393
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945051.1
GO process: GO:0009294 - DNA-mediated transformation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-processing protein DprA
translation: MNTDTVLTETHKIALALSYCHFLKGRERLRVSKAVGSFQELTAWKVRDFERVVERHIRTAGAQLSALPHLVRHGIQTMRCYQIKMVFKDDDAFPSWLREISDVPFVLFYRGTLPCATQPIVGMVGTRTPTGEGVRNSLAFSKACAESGIAVVSGLARGIDGFCHKGALAGGGYTLAVLACGVDQLYPRSNSALAARIIETGGCILSEYAPSEHVMRYRFPERNRLISGLARSLVVMEAPKKSGALITALCALEQGRDVYVYEPLLESLQNEGGRLLHAEGARALTCVQDMFDDWEYACTGRT
SIO_010081: TPCCA_RS01925
subclass of: SO_0000673
so part of: TPCCA_RS01925
location: 414498..415406
location: region:414498-415406:1
so has part: feature:414498-415406:1:exon

WP_013945051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414498-415406:1:exon

TPCCA_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: topA
locus tag: TPCCA_RS01930
old locus tag: TPCCA_0394
so part of: sequence
location: 415439..417634
location: region:415439-417634:1
so has part: feature:415439-417634:1:exon
subclass of: SO_0000010

position:415439:1
position: 415439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417634:1
position: 417634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415439-417634:1:exon

TPCCA_RS01930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: topA
locus tag: TPCCA_RS01930
old locus tag: TPCCA_0394
EC number: 5.6.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342408.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I DNA topoisomerase
translation: MEVRGLQPKRQKTFARKHLVIVESPAKAQTIEKYLGTQYVVRASMGHVIDLPKSRLAIDIEHDFQPEYITVRGRAQCLKELRTLSKQSLQVFLASDRDREGEAIAYHLAQSIQAYCDTPIKRIVFNEITPHAIRAAIGHPVPIDTAKVNAQKARRVLDRLVGYHLCPLLWHKVKNGLSAGRVQSVALRLICEREVEVERFVPEEYWTVEGTFEKDKKSFSALLILIQGKKAVFKSKQEATSAIGLFSQSEARVSQIRSFEKNVRPKQPFTTSTLQQCAANRLGFTSRKTMQVAQQLYEGVSLGTHRVGLITYMRTDSVRVSEAAVKEVRAWIATHFSDALPGTPNRYAAKGKSQDAHEAIRPTYVAHTPERIKAHLTRDQIRLYTLIWERFVASQMTDARVRSLTFEITAGPAVFSATETQVIEQGFYRVLKMLSPKDLSKAVLPPTKEGEVVALHNVQSVQHFTQGPVRYTDASIVKMLEEKGIGRPSTYAPTISVLLDRYYVTRIQKQLMPTPLGKVISDLLTTYFHDVVDVSFTARMESKLDEVEEDKIKWNCVIADFYPAFSEKVSTVMKDLNSMRGVFDEKTDVVCSQCGDTMVKKLGRFGFFLACGKFPECRNTQPVPLAKCPRPACDGNIVGKKTRGRKEFYGCTRFPVCDFVTHFKPTSAVCPQCRCFLVEKSNRRVGTYTACVNPECRYVSPTRKNLSLGKEAVLDGSHRGAQDKGAVQHYE
SIO_010081: TPCCA_RS01930
subclass of: SO_0000673
so part of: TPCCA_RS01930
location: 415439..417634
location: region:415439-417634:1
so has part: feature:415439-417634:1:exon

WP_013945052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415439-417634:1:exon

TPCCA_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01935
old locus tag: TPCCA_0395
so part of: sequence
location: 417627..418520
location: region:417627-418520:1
so has part: feature:417627-418520:1:exon
subclass of: SO_0000010

position:417627:1
position: 417627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418520:1
position: 418520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417627-418520:1:exon

TPCCA_RS01935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01935
old locus tag: TPCCA_0395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342409.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MSNEQFTQYLEYLFRVRRLSAHTVSAYARDLNLFERWLQHAQRERARVTVSDMRLFVCELGRRGLSAASINRVLSVVRGFYVFAKKKHWCADNPARLVKNIKGPSKLPRFMFPPQAKAFYTLPSRTDILWQERDAALFAMLYSTGCRVSEIAALSLKDVHPHLSSAIVRGKGDRERTVFIAPFAQNFLHVYMQARAQRCARYASCTPALFVNQRGRSLSVRGIQYLVSRYVLLAQDVHALSPHAFRHSFASTLIRRGADVRVAQELLGHASVSTTQRYVHVTSEQLQDLYHRAHPRG
SIO_010081: TPCCA_RS01935
subclass of: SO_0000673
so part of: TPCCA_RS01935
location: 417627..418520
location: region:417627-418520:1
so has part: feature:417627-418520:1:exon

WP_013945053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417627-418520:1:exon

TPCCA_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: flgB
locus tag: TPCCA_RS01940
old locus tag: TPCCA_0396
so part of: sequence
location: 418668..419078
location: region:418668-419078:1
so has part: feature:418668-419078:1:exon
subclass of: SO_0000010

position:418668:1
position: 418668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419078:1
position: 419078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418668-419078:1:exon

TPCCA_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: flgB
locus tag: TPCCA_RS01940
old locus tag: TPCCA_0396
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881844.1
GO component: GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal body rod protein FlgB
translation: MNSFTRTVDLLHRALDVNALRYEVTANNLANAEVPGFKRTDVNFEAELKRALDSQRNETSFFKQATAGTNMLSSDVIDYRSVRPRRVLDYLTDVKANGNNVDAEQEAMHVLKIQMHYQMLSQMVGFQYRQVESVLR
SIO_010081: TPCCA_RS01940
subclass of: SO_0000673
so part of: TPCCA_RS01940
location: 418668..419078
location: region:418668-419078:1
so has part: feature:418668-419078:1:exon

WP_010881844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418668-419078:1:exon

TPCCA_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: flgC
locus tag: TPCCA_RS01945
old locus tag: TPCCA_0397
so part of: sequence
location: 419096..419551
location: region:419096-419551:1
so has part: feature:419096-419551:1:exon
subclass of: SO_0000010

position:419096:1
position: 419096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419551:1
position: 419551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419096-419551:1:exon

TPCCA_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: flgC
locus tag: TPCCA_RS01945
old locus tag: TPCCA_0397
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010696780.1
GO component: GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal body rod protein FlgC
translation: MGLFSGINIAATGMSAQRLRADVISDNIANASSTRTQEGGVFRRSRVVLAQKNPGIDWRIPFVPEQLDRGVGTGVRVVSIEKDNAPSRLVYDPTHPDAILSGPKAGYVEYPNVDIVTEMVDLISASRAYEANISVISGSKEMFQRALEIAR
SIO_010081: TPCCA_RS01945
subclass of: SO_0000673
so part of: TPCCA_RS01945
location: 419096..419551
location: region:419096-419551:1
so has part: feature:419096-419551:1:exon

WP_013945054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419096-419551:1:exon

TPCCA_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: fliE
locus tag: TPCCA_RS01950
old locus tag: TPCCA_0398
so part of: sequence
location: 419607..419981
location: region:419607-419981:1
so has part: feature:419607-419981:1:exon
subclass of: SO_0000010

position:419607:1
position: 419607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419981:1
position: 419981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419607-419981:1:exon

TPCCA_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: fliE
locus tag: TPCCA_RS01950
old locus tag: TPCCA_0398
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945055.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-basal body complex protein FliE
translation: MTPVGTITNSANVYKVPSLRKVPEIGPVSVESVRQRMQGNTDAVDQAVNKKAMSFEQTLLRAFDQVNQKQQKTAELTEQMIVDPESVDVHDVTVAMAEASMSLKIAQTVIDKVLKSWNDVTTAR
SIO_010081: TPCCA_RS01950
subclass of: SO_0000673
so part of: TPCCA_RS01950
location: 419607..419981
location: region:419607-419981:1
so has part: feature:419607-419981:1:exon

WP_013945055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419607-419981:1:exon

TPCCA_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: fliF
locus tag: TPCCA_RS01955
old locus tag: TPCCA_0399
so part of: sequence
location: 420098..421801
location: region:420098-421801:1
so has part: feature:420098-421801:1:exon
subclass of: SO_0000010

position:420098:1
position: 420098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421801:1
position: 421801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420098-421801:1:exon

TPCCA_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: fliF
locus tag: TPCCA_RS01955
old locus tag: TPCCA_0399
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945056.1
GO component: GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal-body MS-ring/collar protein FliF
translation: MGEWLGQLGVKLKTQWKKWTLVQKSVLAGAALVSVMGVVVLLTWSAKPTLVPLIDTPITDETVREKIILRLNEENVRATVSSVGLISVSDEKTARRMRSILIREDLIPKNVDPWAIFDVERWTRTDFERRVDVRRAINNTVTNHIKALDDIDDAHVVINVPEDALFQADQKPITASVVIFPKPSSTIASERKKIEGIQKLLKLAVPGLKDENITIVDSDATVLNDFEGFKDADRLSLIEKQQKMIAKLESQYEAKVLALLQKTYGKDRVRDLNIKIEMDLSEKTSQTTKYLPTEIRQDNPDTPWDDSQVVPSVTSISETATTTWQGTGLNPEGPPGVEGQTPPAYKDMSNQVGLSNQSVVKKQEAISKSEINEVVSPVLGRRTVSVNIDGEWRKKRDEHGRFIVKEGHIEREYIPISAEELREATKAVQDAIGFDAGRKDSVSVLNIKFDRTSEFDREDEHYLRVQQRNMIILYSLASVAIVLFIFMVYKVISKEVERRRRLREEELLRQQQLMRERALWEAEQAGMNVSMSVEERKRLELQENVLNMAREHPEDVALLVRTWLMEE
SIO_010081: TPCCA_RS01955
subclass of: SO_0000673
so part of: TPCCA_RS01955
location: 420098..421801
location: region:420098-421801:1
so has part: feature:420098-421801:1:exon

WP_013945056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420098-421801:1:exon

TPCCA_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: fliG
locus tag: TPCCA_RS01960
old locus tag: TPCCA_0400
so part of: sequence
location: 421806..422864
location: region:421806-422864:1
so has part: feature:421806-422864:1:exon
subclass of: SO_0000010

position:421806:1
position: 421806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422864:1
position: 422864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421806-422864:1:exon

TPCCA_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: fliG
locus tag: TPCCA_RS01960
old locus tag: TPCCA_0400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881848.1
GO component: GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor switch protein FliG
translation: MAVTSVKDKLATGEKKQRDIKSLNGRQKAAIFLVSIGEEISAKVMGELKEDEIEKLVFEIARTESVDAELKDAVLEEFQELMTAQNFITSGGIDYARGLLEKSLGSQKAIEIINRLTSSLQVRPFDFIRRTDPTHLLNFIQQEHPQTIALILAYLEPNKASVILQNLPDEIQSDVARRIATMDRTSPDVLREVERVLEKKLSTLSSEDYTAAGGVENIVDILNLVDRSSEKSIVEALEDEDPDLAEEIKKRMFVFEDIVMLDDRAIQKVLREVNMEELAKALKVVDTEVQDKIFRNMSKRAGSMLKEEMEYMGPTRLKDVEEAQQKVVSIIRHLEDSGDIVIARSEEDEMIV
SIO_010081: TPCCA_RS01960
subclass of: SO_0000673
so part of: TPCCA_RS01960
location: 421806..422864
location: region:421806-422864:1
so has part: feature:421806-422864:1:exon

WP_013945057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421806-422864:1:exon

TPCCA_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: fliH
locus tag: TPCCA_RS01965
old locus tag: TPCCA_0401
so part of: sequence
location: 422912..423841
location: region:422912-423841:1
so has part: feature:422912-423841:1:exon
subclass of: SO_0000010

position:422912:1
position: 422912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423841:1
position: 423841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422912-423841:1:exon

TPCCA_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: fliH
locus tag: TPCCA_RS01965
old locus tag: TPCCA_0401
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945058.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO function: GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar assembly protein FliH
translation: MPKMIFRNHEVKNLDQFLLLDLSRSFGVEPQIEEVQSEPVCPVPDMREVQEEVELFRKSWEEEQVQLRARAEREAQDLKERVEEEITAYREQCTQEADRILAQAKEQSELQISEAQQQAERMIAEAETSRQKICDHSKAEGIRLGKEEGFRAGQEEVRYLTERLHKMIEEVMGRRQGILRETERQIVDLVLLMTRKVVKVISENQRAVISANVVHALRKVRTRGAVTLRVNLADVELVTQHKQEFIAAVERVDDLTVVEDTSVGRGGCVVETDFGEIDARVASQLHELEQRVLEVAPIVVSSMPASKGS
SIO_010081: TPCCA_RS01965
subclass of: SO_0000673
so part of: TPCCA_RS01965
location: 422912..423841
location: region:422912-423841:1
so has part: feature:422912-423841:1:exon

WP_013945058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422912-423841:1:exon

TPCCA_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: fliI
locus tag: TPCCA_RS01970
old locus tag: TPCCA_0402
so part of: sequence
location: 423869..425212
location: region:423869-425212:1
so has part: feature:423869-425212:1:exon
subclass of: SO_0000010

position:423869:1
position: 423869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425212:1
position: 425212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423869-425212:1:exon

TPCCA_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: fliI
locus tag: TPCCA_RS01970
old locus tag: TPCCA_0402
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015026159.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar protein export ATPase FliI
translation: MEADLLCKYEVALRESEPVKYVGHVTAVRGLLIESRGPHAVVGELCRVVLRRQGRPLIAEVVGLAGSTVKLMSYTDTHGVEVGCAVVAEGAALSVPVGDALLGRVLNAFGKAIDGKGEIYAPLRSEVLRASSNPMERLPITRQMVTGVRVLDSLLAVGCGQRLGIFSGSGVGKSTLMGMIARNTDADVSVIALIGERGREVMDFVAHDLGPEGLKRSVIVSATSDESPLARVRGAYTATAIAEYFRDQGKQVLLLFDSLTRFAKAQREIGLASGELPATRGYTPGVFETLPKLLERAGSFSMGSVTAFYTVLVDGDDLDEPISDAVRGIVDGHIVLSRALAQRNHYPAIDVLQSVSRLAHRVLGADMKEAVRIVRRALAVYAEVEDLVRVGAYQQGSDAELDRAIAMRAEIERFLTQGSQERVRFQDTVTSLSMLTGPSIAQPPSGV
SIO_010081: TPCCA_RS01970
subclass of: SO_0000673
so part of: TPCCA_RS01970
location: 423869..425212
location: region:423869-425212:1
so has part: feature:423869-425212:1:exon

WP_013945059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423869-425212:1:exon

TPCCA_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: fliJ
locus tag: TPCCA_RS01975
old locus tag: TPCCA_0403
so part of: sequence
location: 425241..425693
location: region:425241-425693:1
so has part: feature:425241-425693:1:exon
subclass of: SO_0000010

position:425241:1
position: 425241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425693:1
position: 425693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425241-425693:1:exon

TPCCA_RS01975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: fliJ
locus tag: TPCCA_RS01975
old locus tag: TPCCA_0403
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881851.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO function: GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar export protein FliJ
translation: MKRFCFSLERVRRLRAFRVRELEVELSKVLAEYGSIDTQIRSIAGEYRARMQDVAPKRGAVFSAASVSAVQDQIDVLQLRREQLLHKQAHLSFTLEQLRERYAHARRAHEALLMLEEKEKTRWREQRLRAEDRACDDLVSARVPGAPSKH
SIO_010081: TPCCA_RS01975
subclass of: SO_0000673
so part of: TPCCA_RS01975
location: 425241..425693
location: region:425241-425693:1
so has part: feature:425241-425693:1:exon

WP_010881851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425241-425693:1:exon

TPCCA_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01980
old locus tag: TPCCA_0404
so part of: sequence
location: complement(425690..426223)
location: region:425690-426223:-1
so has part: feature:425690-426223:-1:exon
subclass of: SO_0000010

position:425690:-1
position: 425690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426223:-1
position: 426223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425690-426223:-1:exon

TPCCA_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01980
old locus tag: TPCCA_0404
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881852.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MKVYIHPAEQHTQRTSYLLCNLSLNEALLIDAGHVSTHLIHTIEKNSCTLTAVFLTRTDDATQAGVRTLLRVYSPHIFCGEKCWNAHESTLLQGDCSLNCAGFTVTCFASPAYGCYLYRIAHLAFTGDLCSAGYEEAGNEADTILERACTAHETLILFHGHGPPSSYTRARTQRASR
SIO_010081: TPCCA_RS01980
subclass of: SO_0000673
so part of: TPCCA_RS01980
location: complement(425690..426223)
location: region:425690-426223:-1
so has part: feature:425690-426223:-1:exon

WP_013945060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425690-426223:-1:exon

TPCCA_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01985
old locus tag: TPCCA_0405
so part of: sequence
location: complement(426220..426654)
location: region:426220-426654:-1
so has part: feature:426220-426654:-1:exon
subclass of: SO_0000010

position:426220:-1
position: 426220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426654:-1
position: 426654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426220-426654:-1:exon

TPCCA_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01985
old locus tag: TPCCA_0405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881853.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pentapeptide repeat-containing protein
translation: MRLNRVDFSGFHFVGCNFFNTVFNACVFANVVMRMCFFERCYLVNSSFTEADIQFSSFEGSILHTVSFAHAVLLSDNFNRIHAQDVSFQESDLSHTRFLHATLATVRFENCTVQHTHFMPSHTTHCTFKGSSTEHAHIYLSDLP
SIO_010081: TPCCA_RS01985
subclass of: SO_0000673
so part of: TPCCA_RS01985
location: complement(426220..426654)
location: region:426220-426654:-1
so has part: feature:426220-426654:-1:exon

WP_245522188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426220-426654:-1:exon

TPCCA_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: murI
locus tag: TPCCA_RS01990
old locus tag: TPCCA_0406
so part of: sequence
location: 426677..427666
location: region:426677-427666:1
so has part: feature:426677-427666:1:exon
subclass of: SO_0000010

position:426677:1
position: 426677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427666:1
position: 427666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426677-427666:1:exon

TPCCA_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: murI
locus tag: TPCCA_RS01990
old locus tag: TPCCA_0406
EC number: 5.1.1.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505489.1
GO function: GO:0008881 - glutamate racemase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate racemase
translation: MCVDVCMSLAKSDVEQYGVGSNMRAKLIRAGRVWCQCMRCAGPGDNTVPVKFFKEQARMMSMSDRREQFQYAFLDSGIGGLPYAHALRVRVPEASLVYVADRVYFPYGNKSSAQIIARASAVLQKVQTNFSPHIVVLACNSMSVNALEFLRAQVSIPVVGVVPAIKQAVACSHKKHIGVLATQCTITHPYTACLRAQFGAGCVFQMRADARLIECLERGLIFEVEDMQREAVARSVMPFQKAGVDALVLACTHFVHVRHLFQDCVGTSCTVVDSLEGVVRRTLRLCPPQSQLRGNAACYVTGARDAGCAARYARYAQHFGLRWAGFLDV
SIO_010081: TPCCA_RS01990
subclass of: SO_0000673
so part of: TPCCA_RS01990
location: 426677..427666
location: region:426677-427666:1
so has part: feature:426677-427666:1:exon

WP_245522189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426677-427666:1:exon

TPCCA_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS01995
old locus tag: TPCCA_0407
so part of: sequence
location: 427770..428450
location: region:427770-428450:1
so has part: feature:427770-428450:1:exon
subclass of: SO_0000010

position:427770:1
position: 427770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428450:1
position: 428450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427770-428450:1:exon

TPCCA_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS01995
old locus tag: TPCCA_0407
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945063.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD family hydrolase
translation: MGKPRFRAVAFDIDGTLYPGWRLALRVMPFMIRNARLMRAFRAVRQELRREQRTALIPFEDFFFAQATRIAPRVGLSAEEVRAFLDTALYRGWRRHFLHIKPFPHVLSSVLELRRHGLKIALLSDFPPSQKGCLWGVRALCDVTLGTEEIGSLKPSPRAFYALAQRLNLRCEEILYVGNSVHDVEGAHAAGMRIACVRRPFTSLRVRRSADWLFSDYRTLCAYVIA
SIO_010081: TPCCA_RS01995
subclass of: SO_0000673
so part of: TPCCA_RS01995
location: 427770..428450
location: region:427770-428450:1
so has part: feature:427770-428450:1:exon

WP_013945063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427770-428450:1:exon

TPCCA_RS02000
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02000
old locus tag: TPCCA_0408
so part of: sequence
location: 428546..431800
location: region:428546-431800:1
so has part: feature:428546-431800:1:exon
subclass of: SO_0000010

position:428546:1
position: 428546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431800:1
position: 431800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428546-431800:1:exon

TPCCA_RS02000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02000
old locus tag: TPCCA_0408
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945064.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase
translation: MEYFLTVVIACAISLVMVAFSRQLDKGNRSLEKVKRYADYIKEDLESFSAEKIAMLKDAAIELNVKQEQAIASVKKMDHLYDQFMKKSTALAAANMAVEKIHREVQASEKDVCTLREQVAVAQGLIAEVNKESSFVDSLSKRVAAAKTQLQQVSAAIPDMQNAFTRENTALLHRVRDGVLADVHKELAVLQTRLEKAQGESQSLFEVSAVKLRELYEGAFSEATVRAQVLEENGFGQLKVQAENRLLQLQEEFEGRLLSLQQHVMQRVEQTDQHIQDCASQWSVRAQTCESDLSIRLADVTACVDESVAQLKEQITTQEREVRAHLEGIEQSLSGAESGLRERVHKSVTSFHENLNKIAEASDAQLQQYRKEMDGRCSKFDRELEGIDVLESQLQLARERTEQKVREEFEAYAQDRERKQLAFEAQLQHSMDTVEHRMKQLNDELRELKASAYANASEKLQSVEDNFFEVLTKRSDSLHARFSEWSEGIEGRLTQLALESESARKDLEDTYRRELHTRLKDFVEEYKGQCTKLGEQILAIESNVKQHMRANDDLFQRHAEKFTIDVAALHDKAHNLIERELEAVRQRLRDSLHVHSSMIETEVRDMNVLVQEIKQEAQGGCGSVKRDIEAWKAHTDKQFADAKQLFEGKIAHLVNLSERAIENLSARYDMQYEDFSQKNGESLQSLRDEIGKMCDTMRTVKEELGGYVNTVTGQLHADGRRESEALHRTVKEARAQVDRTLQETRDLVQDLRAEFGEAQVGLLTKLQGESDRFSQVLQEIERKQHEFIGQTRIFDRADELRENLEKDIERLTETVTRFEVYREAMDKLSLQYEKVKHFGEEAEQRVEKFMQERKNIDLLEGEFSKLAALSDAMDKKIVELTLANDDLQRYQVQIRKVKEGLGDISTRYERLDKKGAVLDQTVQDVDRAFENLKELEKTLKNFRGELETVDPQLQRVRAEIAVLLDNQEKAERVRSRIECADALLGEMESRIEKMQHAREWLAGTETRLQEISKVSEGQLRLLGDLMRQDPANKIPGAGAPPLATRQNVVKLHKSGWSDDAIAHALKISKGEVQLILELPDMDSF
SIO_010081: TPCCA_RS02000
subclass of: SO_0000673
so part of: TPCCA_RS02000
location: 428546..431800
location: region:428546-431800:1
so has part: feature:428546-431800:1:exon

WP_013945064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428546-431800:1:exon

TPCCA_RS05655
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05655
so part of: sequence
location: 431842..432027
location: region:431842-432027:1
so has part: feature:431842-432027:1:exon
subclass of: SO_0000010

position:431842:1
position: 431842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432027:1
position: 432027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431842-432027:1:exon

TPCCA_RS05655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881857.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIDWIVFFALAWGRARVSCALKDENNAPSNSFANHYGERWLDPTARYRRRMSDLLPFCFCA
SIO_010081: TPCCA_RS05655
subclass of: SO_0000673
so part of: TPCCA_RS05655
location: 431842..432027
location: region:431842-432027:1
so has part: feature:431842-432027:1:exon

WP_010881857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431842-432027:1:exon

TPCCA_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: yajC
locus tag: TPCCA_RS02005
old locus tag: TPCCA_0409a
so part of: sequence
location: 431966..432295
location: region:431966-432295:1
so has part: feature:431966-432295:1:exon
subclass of: SO_0000010

position:431966:1
position: 431966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432295:1
position: 432295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431966-432295:1:exon

TPCCA_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: yajC
locus tag: TPCCA_RS02005
old locus tag: TPCCA_0409a
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342412.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit YajC
translation: MPPLAIGVVCLIFYLFVFAPNLREQKRTQALIKNIKKGDPVVTIGGIHGVVSVVREHSLVIKVNEHGTLEVSRSAIARINDRRGVSNPKTDCDSKPGVPLTGVDKEIAR
SIO_010081: TPCCA_RS02005
subclass of: SO_0000673
so part of: TPCCA_RS02005
location: 431966..432295
location: region:431966-432295:1
so has part: feature:431966-432295:1:exon

WP_235214121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431966-432295:1:exon

TPCCA_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: secD
locus tag: TPCCA_RS02010
old locus tag: TPCCA_0410
so part of: sequence
location: 432292..434043
location: region:432292-434043:1
so has part: feature:432292-434043:1:exon
subclass of: SO_0000010

position:432292:1
position: 432292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434043:1
position: 434043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432292-434043:1:exon

TPCCA_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: secD
locus tag: TPCCA_RS02010
old locus tag: TPCCA_0410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881858.1
GO component: GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein translocase subunit SecD
translation: MSKKARFGVVLVVLAACSGFLFPTLQWYFLTDAQTRQRALSSREQIKEYAVQSAERDLADLTRLARAGSDEDISARYAPLVAAARQNLSYSGRPAPSRWTAAALVSAFPVKSEQGFVLYARPLMEQTYREAVLKMKRRQAQAVKLGLDLSGGTSVVIKADLSEVTKGVPDAERAAIRSEAMALVLSTLENRINRFGLSEPVIRRQGEDRVYVEIPGLTDRDRVHSIVMGRGVLAFHLVDDDATQKLLDHYRNNPQGTFDAAHQLHDLSLVPEHTSVLGVYRKDSYGLDVRDGFLVVKKEPALEGRHIRDATVSSGRANEPLVLFDLDHEGARIFSELTTKEIGRRLAIVSDGKIRSAPAIREPITAGSGSISGFSAEEAQNLKTALRSAWLNVALEIENQQVVGASMGEESIRQGTRALVWGLCAVLLFMLVWYQEAGVNACVAQLLNLYIMFGVLSAFNLTLTLSSIAGMILTIGMAVDANVVVFERIREELALGKSRGAAVCSGFERAFWAIMDSNVTTFIAALFLSVLGTGPIKGFAYSLAIGVVSSVFTALFVSRLMFDYGTEVLHKKTVRIGWRIARV
SIO_010081: TPCCA_RS02010
subclass of: SO_0000673
so part of: TPCCA_RS02010
location: 432292..434043
location: region:432292-434043:1
so has part: feature:432292-434043:1:exon

WP_010881858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432292-434043:1:exon

TPCCA_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: secF
locus tag: TPCCA_RS02015
old locus tag: TPCCA_0411
so part of: sequence
location: 434040..435302
location: region:434040-435302:1
so has part: feature:434040-435302:1:exon
subclass of: SO_0000010

position:434040:1
position: 434040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435302:1
position: 435302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434040-435302:1:exon

TPCCA_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: secF
locus tag: TPCCA_RS02015
old locus tag: TPCCA_0411
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945066.1
GO component: GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein translocase subunit SecF
translation: MRQVVRFSLLFLPCAILSVVLIGAGVLRWALRGMSFGVDFQSGLIERLRIAPPAFSLVYTGTQSMQFFQDEQKVVFTVSSPGVLGERYEFLYTEYPTLRAFSEGAKKVEHLSVTLHAPETVYMRDTFSGAEGSTLSSASCFVHYFSEDFRAPGVEELRRVLKDVPSAVVQQVGVRAEHTFQVRVAAETAFPSSLLPEQGGTAPAQSDTPDLVTPQGAVESVVYAALVRAYGADHVVRLAMDFVGSRFSHLLVRQALLLVLGALVLIFLYVALRFRWFFALGAIVALVHDACIMVSFMVWFGLEFNSASIAAILTIIGYSINDTVVVFDRVRQTILLDPIASVTTVLDRSQTDMLTRTVVTTVTTLLAALMLYVFTEGGSRDFSLALMVGMVSGVYSTIYIAGGCIALISRGKSGGQLLGL
SIO_010081: TPCCA_RS02015
subclass of: SO_0000673
so part of: TPCCA_RS02015
location: 434040..435302
location: region:434040-435302:1
so has part: feature:434040-435302:1:exon

WP_013945066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434040-435302:1:exon

TPCCA_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02020
old locus tag: TPCCA_0412
so part of: sequence
location: complement(435378..435683)
location: region:435378-435683:-1
so has part: feature:435378-435683:-1:exon
subclass of: SO_0000010

position:435378:-1
position: 435378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435683:-1
position: 435683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435378-435683:-1:exon

TPCCA_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02020
old locus tag: TPCCA_0412
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006188836.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PUR family DNA/RNA-binding protein
translation: MGIRGELFTTEVQAENRTYFFNVKENRVGDVFLQVVESKNVDGAGFDRHAVVVFEEEMQKFLQGFNRSLDFLEKNRKERLHLRQARSLHARGERKTIVRKK
SIO_010081: TPCCA_RS02020
subclass of: SO_0000673
so part of: TPCCA_RS02020
location: complement(435378..435683)
location: region:435378-435683:-1
so has part: feature:435378-435683:-1:exon

WP_013945067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435378-435683:-1:exon

TPCCA_RS02025
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02025
old locus tag: TPCCA_0413
so part of: sequence
location: complement(435702..437600)
location: region:435702-437600:-1
so has part: feature:435702-437600:-1:exon
subclass of: SO_0000010

position:435702:-1
position: 435702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437600:-1
position: 437600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435702-437600:-1:exon

TPCCA_RS02025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02025
old locus tag: TPCCA_0413
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945068.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglucomutase
translation: MSLLNSLITSLTLPQPAQPLHLSLTRSPSGWRKVFPYAFTPERTVTLTQKADAVLSAQVALSYARFLKKKVPKPRVVIARDSRPTGEIISAICTAILHLEGCSLRCVGVGPIPEIASYARNYDAFLYISASHNPIEYNGFKFGLNDGGVLSPTQAQQLSEDFVAQCLRPASFQKIREHCATLNASILEPLLYNKTHKQESLHSYDLFIREVIANSPKETEHRAFFHRFTQQRAAYSEQGTPLSILIDFNGSARAASIDRRLLESLGVALFSIAETPGDIRHRIVPEGSSLTACAQALTEAATRGSSPEERSIAFGFVPDCDGDRGNIVYYDQTLNRAVIPHEQAVFALSVVSEICELSRNLHMQPHRAPPIALVTNGPTSLRVEAIAQLLDVHVFRTEVGEAHLIEKAHLLRKEGYCVRILGEGSNGGSILHPAAVRDPLHTVFALLKLLLLRGDGKQPGLFAWWCAHSHQTERAQHAFTISDLFASLPAYTTTPTHDTRALLQIRTTDHALLKSAYQRVFERRWAQEKDTLKKRFGICSYRPILYRGREQQDAAGDFSRSANGGLKIQFYNEHQEAVAFVWMRGSKTEPIFRISADLKGNDEAGEAALLQLHADMVREADRCALSCADTTS
SIO_010081: TPCCA_RS02025
subclass of: SO_0000673
so part of: TPCCA_RS02025
location: complement(435702..437600)
location: region:435702-437600:-1
so has part: feature:435702-437600:-1:exon

WP_013945068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435702-437600:-1:exon

TPCCA_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02030
old locus tag: TPCCA_0414
so part of: sequence
location: 437670..439058
location: region:437670-439058:1
so has part: feature:437670-439058:1:exon
subclass of: SO_0000010

position:437670:1
position: 437670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439058:1
position: 439058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437670-439058:1:exon

TPCCA_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02030
old locus tag: TPCCA_0414
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015026161.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AGCS family amino acid carrier protein
translation: MVGCRGGGEVGMGVVEWVGEWMHAVVWSFPMVVLLLGTGCYVTVCMKFFPVVRLWYVLRQTIGGRGGKKGGSGEVSAFRAVSTALAATLGSGNIVGVATAIAIGGPGAIFWIWVTGVFGMGTKFVEVVLAVYYRRQTGDGRFVGGPMYYLKDGVGVPGAGVLASLFCIFSVIASFGIGNMTQSNSVALVFEDVFCVDVRVTGAVLMVLVGLVSVGGLKSISWVTGVMVPGMAILYVCVGVVLVCCNMRQLVPVCWDIVSGAFAGTAAVGGFAGSVVRQAIAVGISRGVAVNEAGLGTAPIAHAAAITDHPVRQGLWGIFEVFVGTMVVSSVTAFAILLTGVWQGGASGAALTVQSFERGLPFGIGQYVVGVSVPLFAFTTMLGWLYYGERCAEFLCGPRVCPLYRAVWLPFVYVGAVGSLSSVWNISDAFNGLMALPNLVGLLFLARQGMRLREEFFAQQEG
SIO_010081: TPCCA_RS02030
subclass of: SO_0000673
so part of: TPCCA_RS02030
location: 437670..439058
location: region:437670-439058:1
so has part: feature:437670-439058:1:exon

WP_245522190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437670-439058:1:exon

TPCCA_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: ffh
locus tag: TPCCA_RS02040
old locus tag: TPCCA_0416
so part of: sequence
location: complement(439520..440881)
location: region:439520-440881:-1
so has part: feature:439520-440881:-1:exon
subclass of: SO_0000010

position:439520:-1
position: 439520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440881:-1
position: 440881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439520-440881:-1:exon

TPCCA_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: ffh
locus tag: TPCCA_RS02040
old locus tag: TPCCA_0416
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342415.1
GO component: GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO function: GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal recognition particle protein
translation: MFEQLSASFKRIVGALGGRATISERNIQEAVESIKRALLDADVHVRVVRRFVNQTMQHAQGQTVLASVSPAQQFIKIVHERLTAFLGEHTRSLHLKGPDTQSIILLLGLQGSGKTTSAAKLAAYLKNAGRSPLLAACDHVRAAASAQLAVLGTHIGVPVYQHALPHEQQPCALDTARGALQYARSHGNDVLIIDTAGRLHVDAALMQELILLKETLVPVETLLVADALTGQTVVRIAEEFHAAVGISGVVLSKFDSDTRGGAALSLKSITGQPLLFVGTGERPQDFEPFHPERAAGRILGMGDVVSLVEKAQKAFDAQERARAQKKTQSHERFTLSDMLDHLQTIEKMGPLHSLVEMIPGLAGAVSADALDARAFKRQKAIIQSMTVQECDNSLIIGPSRRRRIAAGSGTSVADVNRLIKNFERMRTLMRKTAWQSRRAAHPKGDTPYGWPHR
SIO_010081: TPCCA_RS02040
subclass of: SO_0000673
so part of: TPCCA_RS02040
location: complement(439520..440881)
location: region:439520-440881:-1
so has part: feature:439520-440881:-1:exon

WP_013945071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439520-440881:-1:exon

TPCCA_RS02045
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: lnt
locus tag: TPCCA_RS02045
old locus tag: TPCCA_0417
so part of: sequence
location: complement(440874..442553)
location: region:440874-442553:-1
so has part: feature:440874-442553:-1:exon
subclass of: SO_0000010

position:440874:-1
position: 440874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442553:-1
position: 442553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440874-442553:-1:exon

TPCCA_RS02045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: lnt
locus tag: TPCCA_RS02045
old locus tag: TPCCA_0417
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342416.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO process: GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: apolipoprotein N-acyltransferase
translation: MLCTAPLVSSAASAVLLAFAIPNEFWLAGSSVLGLGALVPLYVGFLLSPAKKHVACSYGLFVALVHVCSSFWLKNFQGFALFTLGASTVGYFFYALPFGVAFACILRKQAPARACAFALVWTLWEWVKSTGILAYPWGTVPMTAHNLSYLIQIADITGVWGLSFLIPLANACVAESLHFFIKKRDGVPVFRLWLLTGCLYCLCSLYGAYRIATLGAPRTTLALAIVQQNADPWDTTSFEKNLTTAIHLTETALRTQTAPPLPTTPYRKEKTLTHASARAPVDMVVWSESSLRYPYEQYRHVYNALPAARPFSAFLRTLGAPLLVGTPLRLSGNSTKGGYANAVALLRPDGHVAQVYGKMQMVPFAEFIPWGHMTSVQRLAQMLAGFSESWTPGPGPRLFRVPCAAGGSVRFATPICYEDAFPSLCAALHTQGSELLINLTNDSWSKTASAEWQHYVVSLFRAIELRTTLVRSTNSGFTVVIGPEGKTRAAFPLFQATSAVLHVPVYPVVRTYYARMRDWVIVLCALILFAEGVRMAVHTRRHSTTQAENSLQQIRGEHV
SIO_010081: TPCCA_RS02045
subclass of: SO_0000673
so part of: TPCCA_RS02045
location: complement(440874..442553)
location: region:440874-442553:-1
so has part: feature:440874-442553:-1:exon

WP_013945072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440874-442553:-1:exon

TPCCA_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02050
old locus tag: TPCCA_0418
so part of: sequence
location: 442607..443773
location: region:442607-443773:1
so has part: feature:442607-443773:1:exon
subclass of: SO_0000010

position:442607:1
position: 442607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443773:1
position: 443773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442607-443773:1:exon

TPCCA_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02050
old locus tag: TPCCA_0418
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505491.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: galactokinase
translation: MMLRMRRIESCHTEEYGDEPEAIAVVPGRFHLLGEYLWFAQGNTLSMAIDQTLTLCVSRRKDSTFRLFSLTLGERRKISTANLRYRKEDRWANSVKAVILSFMDGGYHLTGLNCTILSQIPPDAGLGTPNALKVAMALVLGRLFAATLPKESVVSIVEHANERYLKTHAHRADILCVLFAKQGSCVRTDHRKKQAELCQFPSEGKRIVLTDSRVPRFIAREEFTARLKRCVDAYELVKRNPDMPRAMSKLMAAALEEIDVPEGIRRRVISLVRESLGVDEAIEALRKRDFAAFSRVVNRSHERLRDRFEISCPELDWLVKRALEFVDPDAPDVVCSRLTGRGFGGCTYAILRDQDFEPYLERLDEYERIFGFKAAAYEVQCSEGARVL
SIO_010081: TPCCA_RS02050
subclass of: SO_0000673
so part of: TPCCA_RS02050
location: 442607..443773
location: region:442607-443773:1
so has part: feature:442607-443773:1:exon

WP_245522191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442607-443773:1:exon

TPCCA_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: surE
locus tag: TPCCA_RS02055
old locus tag: TPCCA_0419
so part of: sequence
location: 443770..444522
location: region:443770-444522:1
so has part: feature:443770-444522:1:exon
subclass of: SO_0000010

position:443770:1
position: 443770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444522:1
position: 444522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443770-444522:1:exon

TPCCA_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: surE
locus tag: TPCCA_RS02055
old locus tag: TPCCA_0419
EC number: 3.1.3.5
EC number: 3.1.3.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342417.1
GO function: GO:0008254 - 3'-nucleotidase activity [Evidence IEA]; GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
GO process: GO:0006950 - response to stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5'/3'-nucleotidase SurE
translation: MRILLTNDDGYQAAGIRALHAALKAAPEGYGVTVVAPDRDRSAVSHGITTLEPVTVKEVEPGIWSCSGTPVDCVNRALRQVCVGTPPDVVVSGINEGENLGTDIVFSGTVAAARQAVMYGIAGIAASLLPVSDFGTGCRFQALARFVARHVRALAALSSEDVLVNINARSAQAYARACYARVARRIYEERGAVRQAGLAHVFEYQGGAAHTGAVQDSDWAVVMRGDIAITLVYAQPVSMPPVLPLPDFAF
SIO_010081: TPCCA_RS02055
subclass of: SO_0000673
so part of: TPCCA_RS02055
location: 443770..444522
location: region:443770-444522:1
so has part: feature:443770-444522:1:exon

WP_013945074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443770-444522:1:exon

TPCCA_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02060
old locus tag: TPCCA_0421
so part of: sequence
location: 444692..446725
location: region:444692-446725:1
so has part: feature:444692-446725:1:exon
subclass of: SO_0000010

position:444692:1
position: 444692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446725:1
position: 446725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444692-446725:1:exon

TPCCA_RS02060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02060
old locus tag: TPCCA_0421
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881869.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MSRRSVGCAGALLLLFAVGAQEHAPPVVRDTALAAGEFRRGVLAYYRGAFNDAIQLFERALSAAPRNPLILEWLGNAYYRSGIEGAALHQWGAARDLGYGGALLRNKIEVVQQRRDFAPDSADALHFSESESFHAVRRGTVLFRRPLSLCALADGTFWMSAYGSNELLRFDVNGRVIARTRGPVEGFDRPFDVIQTRSGDLLVSEFASDRICRLTKEGRFLKSFGGKGRGVGQLIGPQFLATDRYDNIYVTDFGNARVAVFAPDGAPLFHFGQKSARFFGFSAPGGIAILDELVYVADALKGAIYVFDTAGNYVRTLVAEGTLKHVESVRAWNGRLLVSLPNEVMVVDVGLASLHTIARLGNAPIRLTAAVPDANGNVLLADYKNERIEIVSRISELAGGLFVHFERVHADRFPSVTVNVSVHTREGTPVVGLDVSNFFLTEEHRPVSEMRLQGAAYLNDTCSLSILVDRSPATEQEMRLVTRVIGELAQAVGEQGTLSVVSAAQSPVLEGTFTAAQLQAQPLRLRAKSSSQWRFDLGLRLAAGTLVNADYKRAVVFLSLGELQTQDFAQYGVTDLAAYLTNNETSFYVIQLQRTVLPVELGYLVQKTRGAVYSVYAQEGLGALVAHVRSGAAGTYALSYRSRLPTDFGRAYMPVEAEVRVLSRSGRDETGYFAPLE
SIO_010081: TPCCA_RS02060
subclass of: SO_0000673
so part of: TPCCA_RS02060
location: 444692..446725
location: region:444692-446725:1
so has part: feature:444692-446725:1:exon

WP_235214101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444692-446725:1:exon

TPCCA_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02065
old locus tag: TPCCA_0422
so part of: sequence
location: 446739..447734
location: region:446739-447734:1
so has part: feature:446739-447734:1:exon
subclass of: SO_0000010

position:446739:1
position: 446739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447734:1
position: 447734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446739-447734:1:exon

TPCCA_RS02065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02065
old locus tag: TPCCA_0422
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505493.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTGKGWSAWVRLCVLSTQVGLAAEPALARLAGVWENATRIVAIAPTADAMRFSLMLVHKPYYAYVYERVAVFSLSSLSDARADVLPPPAAQKAERVDLVLSFEGRVRVQPLVLCRWGDALFCSFFQRVSYGTRSGSVSSEQIPVRTDDPLFGFWIEEGSAEALRAYSSQAPGELNAFFFTEANFYRFRYWRDDALAFAAQRAYFTADDGVTYEIPQYVQRGAAVYSCTTGRSRVVRNFQTGTYEVRTSSDGSKRLMLRRRGAGPGSYAVGAVYPRQGFLDESALALRVDGQFLAIGEPFLRKSVVHDVTAFIDAHNARKRAPRAPLLVPDF
SIO_010081: TPCCA_RS02065
subclass of: SO_0000673
so part of: TPCCA_RS02065
location: 446739..447734
location: region:446739-447734:1
so has part: feature:446739-447734:1:exon

WP_245522192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446739-447734:1:exon

TPCCA_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02070
old locus tag: TPCCA_0423
so part of: sequence
location: 447759..448565
location: region:447759-448565:1
so has part: feature:447759-448565:1:exon
subclass of: SO_0000010

position:447759:1
position: 447759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448565:1
position: 448565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447759-448565:1:exon

TPCCA_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02070
old locus tag: TPCCA_0423
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945077.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRVFVSWHKQKDKGERERAGALQGACISTPEHRQVFALVGRSGSGKSFRAQIVMRRFDIAFVIDDGLLIREDKIIAGRSAKQERTLLAAIRVALFENTMHRRVVARVLTYFLCGSQNKKVLILGTSEKMVRRIALRVGLPEPGHIIRIEDIASSEEIACALRTRHVEGTHVIPVPSGEVRKSYPKIFYERIKLLLRREAGAERIGRWAHAIWHEGLKRACSGAHAHVFEKSIVRPPFSCNLRVVAVTGGTQDASPVVVPPHEELALQQ
SIO_010081: TPCCA_RS02070
subclass of: SO_0000673
so part of: TPCCA_RS02070
location: 447759..448565
location: region:447759-448565:1
so has part: feature:447759-448565:1:exon

WP_013945077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447759-448565:1:exon

TPCCA_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02075
old locus tag: TPCCA_0424
so part of: sequence
location: 448691..449305
location: region:448691-449305:1
so has part: feature:448691-449305:1:exon
subclass of: SO_0000010

position:448691:1
position: 448691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449305:1
position: 449305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448691-449305:1:exon

TPCCA_RS02075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02075
old locus tag: TPCCA_0424
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945078.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: V-type ATP synthase subunit E
translation: MEIQLQDLVDRIKREAVASSEEQASRLLGESREEAERIVRAAREEAERIVRAAREEAERIESSSLAALSQASRNVLLSFQDSVTRSLRAIISMETAQAYDAGVLRELIPRVVSAWVQAEGDKLELILSPADLRTLEGVFCAALQEQLSAGVELRSDDCLTAGFRIVPAEGGSYYDFSAAAVAQLFSSYVSARVAEVLRSAAQEL
SIO_010081: TPCCA_RS02075
subclass of: SO_0000673
so part of: TPCCA_RS02075
location: 448691..449305
location: region:448691-449305:1
so has part: feature:448691-449305:1:exon

WP_013945078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448691-449305:1:exon

TPCCA_RS05660
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05660
old locus tag: TPCCA_0425
so part of: sequence
location: 449305..449850
location: region:449305-449850:1
so has part: feature:449305-449850:1:exon
subclass of: SO_0000010

position:449850:1
position: 449850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449305-449850:1:exon

TPCCA_RS05660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05660
old locus tag: TPCCA_0425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945079.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSHCYLITQLPSLLCGAVPPLRYQDFLDCALRFLGRQDAAVLGNISLCPVPARDSTGSRVLDRWGEFEYALRCALARERADRLRWDIPVEVRQCPMAQESVARAARVAVSLDDPLEAEYFLNDARFSFVEGCRPLDPFSSEAVFLYGLQLMLLTHRSRFTMQAGSKAYAALYYTILGAYT
SIO_010081: TPCCA_RS05660
subclass of: SO_0000673
so part of: TPCCA_RS05660
location: 449305..449850
location: region:449305-449850:1
so has part: feature:449305-449850:1:exon

WP_013945079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449305-449850:1:exon

TPCCA_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02085
old locus tag: TPCCA_0426
so part of: sequence
location: 449847..451616
location: region:449847-451616:1
so has part: feature:449847-451616:1:exon
subclass of: SO_0000010

position:449847:1
position: 449847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451616:1
position: 451616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449847-451616:1:exon

TPCCA_RS02085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02085
old locus tag: TPCCA_0426
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881874.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: V-type ATP synthase subunit A
translation: MTQTKGIVSAVNGNMVSVTFEGVVSLNEVGYVHVGNARLKAEIIRVRGREAQLQVFEITRGVSVGDRVEFTGDLLSVELGPGLLGQVYDGLQNPLPLLAEKVGYFLERGVYLPALSRTSEWVFTPHVSVGERVVRGDVLGYTPEGALKHRIMVPFHMGDSYEVVFIQTAGTYRVHDVIARVRDAQGHEHELTMAFRWPVKRPVHCYAERLKPTEPLVTSIRTIDTFFPVAKGGAYCIPGPFGAGKTVLQHSTSRNADVDVVVIAACGERAGEVVETLREFPDLTDPRTGRSLMERTVIVCNTSSMPVASREASVYTGVTLAEYYRQMGLDVLLLADSTSRWAQALREMSGRLEEIPGEEAFPAYLESCIAAFYERAGVVRLRSGEKGSVTIGGTVSPAGGNFEEPVTQATLKVVGAFHGLSRERSDARRYPAVHPLDSWSKYPSVLDARAVAYGRSFLRRGAEVEQMMRVVGEEGTSMEDFLVYLKGSFLDSVYLQQNSFDTVDSAVPVARQKHCYAIVMRVLGSVLAFESKDDARAYFSKLGHMFIDYNCCAWNSEAFVEKEKEIRAFLQGESTKIDSKAEGIIRGME
SIO_010081: TPCCA_RS02085
subclass of: SO_0000673
so part of: TPCCA_RS02085
location: 449847..451616
location: region:449847-451616:1
so has part: feature:449847-451616:1:exon

WP_013945080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449847-451616:1:exon

TPCCA_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02090
old locus tag: TPCCA_0427
so part of: sequence
location: 451620..452912
location: region:451620-452912:1
so has part: feature:451620-452912:1:exon
subclass of: SO_0000010

position:451620:1
position: 451620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452912:1
position: 452912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451620-452912:1:exon

TPCCA_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02090
old locus tag: TPCCA_0427
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881875.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: V-type ATP synthase subunit B
translation: MYKVYEKIESINGSVITVRAKGVHYGELARVKTAFGDSLAEVNKLEGDVVSLQVFAGGRGISTGSEVRFLGRGMLVSFSDYLLGRIFNGSGVPRDGGPALKEGRVEIGGPSVNPAKRIIARRMIRTGIPMIDVFNTLVVSQKLPIFSSSGEPYNELLARIAMQAEVDVIVLGGMGLKHDDYLYFKSALEEAGALSRAVLFVHTASDPTVECLMVPDMCLAVAEQFALKGRDVLVLLTDMTNFADAMKEIAITQEQVPSNRGYPGDLYSQLASRYEKAVDFDDAGSVTILAVTTMPGDDVTHPVPDNTGYITEGQFYLKNGRIEPFGSLSRLKQNVNGRTRADHRALMDNMIKLYAAYRDALEKRSMGFAMSEWDEKLLTYGGLFEAQLMDLSVNIPLEEALDTGWKILGRCFTPEETGIRSDLINTYWPA
SIO_010081: TPCCA_RS02090
subclass of: SO_0000673
so part of: TPCCA_RS02090
location: 451620..452912
location: region:451620-452912:1
so has part: feature:451620-452912:1:exon

WP_013945081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451620-452912:1:exon

TPCCA_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02095
old locus tag: TPCCA_0428
so part of: sequence
location: 452924..453544
location: region:452924-453544:1
so has part: feature:452924-453544:1:exon
subclass of: SO_0000010

position:452924:1
position: 452924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453544:1
position: 453544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452924-453544:1:exon

TPCCA_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02095
old locus tag: TPCCA_0428
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881876.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: V-type ATP synthase subunit D
translation: MAVRLTKNELKRQKETLKTFRRFLPTLQLKKQQLYAEIRAVEARASEVRSRADALRQDVQQWVAVFSESGVFDARLLRVQEVKKTYASIAGVRIPCFLEVHFACPPYDLYRVPLWVDTAVRKMQEVLSLDLEAHVLDEQALLLGAELRTTTQRVNLFEKVKIPETRACIRKITVYLGDQQVAAVVRGKMSKKNLVDVSRMEQEDTR
SIO_010081: TPCCA_RS02095
subclass of: SO_0000673
so part of: TPCCA_RS02095
location: 452924..453544
location: region:452924-453544:1
so has part: feature:452924-453544:1:exon

WP_010881876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452924-453544:1:exon

TPCCA_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02100
old locus tag: TPCCA_0429
so part of: sequence
location: 453553..455409
location: region:453553-455409:1
so has part: feature:453553-455409:1:exon
subclass of: SO_0000010

position:453553:1
position: 453553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455409:1
position: 455409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453553-455409:1:exon

TPCCA_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02100
old locus tag: TPCCA_0429
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945082.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: V-type ATP synthase subunit I
translation: MKKVTLLVLGSEQERSLQALRSFGAVHVQLRECASERLTDLHALDARCVQAIALVTDAQTKNVTRGEECRVAGQVVEAAEAVEQIVRTHSDRVELAQRIAQCIAHLERCEPWGDFDPADVRALAQWGIHLIPVELSERSYRCLPDELQTLCLARRGGLVRCVLVADRPGLPPSLPADARALELPDVSPADMFVRLRQLREECATLTQRLLAYSEYQGAIRALRQKIAADIEFERVHLSMVSVDVSQWRETGETLRIAHVSGYLPVSRVRAFSECARKEAWAYCCVDPMPEDPVPTQLRNNRWVNLISPLMNFLGTVPGYWEVDISGFFLLFFGVFFSIIFADAGYGAVLTLVSLGGIVLSKRKHAVVSPAWCLGLYLGTLTMVWGALVCNWFGVPVQYVPASLARIAVWEISGFADAAQRNKNQMHVCFFLGLLHLCLGHLIVVRRTFRSLRVLAEFGSLLMLGGMYVVVLNLIVDKERYPLTGMVVGSIIAGFVLNFIFVNYRVSVRQSVADSMKNVINALLGIVNVFADVMSYIRLWAVGLAGGAISATVNEMTHPLFANFLAFLGIVLLLFGHGLNYVMSILSVIVHGVRLNTLEFSNHVGLMWTGIRYTPFRER
SIO_010081: TPCCA_RS02100
subclass of: SO_0000673
so part of: TPCCA_RS02100
location: 453553..455409
location: region:453553-455409:1
so has part: feature:453553-455409:1:exon

WP_245522193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453553-455409:1:exon

TPCCA_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02105
old locus tag: TPCCA_0430
so part of: sequence
location: 455446..455868
location: region:455446-455868:1
so has part: feature:455446-455868:1:exon
subclass of: SO_0000010

position:455446:1
position: 455446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455868:1
position: 455868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455446-455868:1:exon

TPCCA_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02105
old locus tag: TPCCA_0430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460548.1
note: produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP synthase subunit K
translation: MNFGMFGAAAVLGISAVGSALGLALAGQGTIGSWKRCYLNNKPAPFILLAFAGAPLTQTIYGFLLMKAMLSSEKDPWYLLGAGVACGLGIAASALSQGRAAAAGADALAETGKGFSQYLTIVGLCETVALLVMVFGIINC
SIO_010081: TPCCA_RS02105
subclass of: SO_0000673
so part of: TPCCA_RS02105
location: 455446..455868
location: region:455446-455868:1
so has part: feature:455446-455868:1:exon

WP_012460548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455446-455868:1:exon

TPCCA_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02110
old locus tag: TPCCA_0431
so part of: sequence
location: 455902..456723
location: region:455902-456723:1
so has part: feature:455902-456723:1:exon
subclass of: SO_0000010

position:455902:1
position: 455902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456723:1
position: 456723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455902-456723:1:exon

TPCCA_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02110
old locus tag: TPCCA_0431
EC number: 2.7.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881879.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III pantothenate kinase
translation: MLLIDVGNSHVVFGIQGENGGRVCVRELFRLAPDARKTQDEYSLLIHALCERAGVGRASLRDAFISSVVPVLTKTIADAVAQVSGVQPVVFGPWAYEHLPVRIPEPVRAEIGTDLVANAVAAYVHFRSACVVVDCGTALTFTAVDGTGLIQGVAIAPGLRTAVQSLHTGTAQLPLVPLALPDSVLGKDTTHAVQAGVVRGTLFVIRAMIAQCQKELGCRCAAVITGGLSRLFSSEVDFPPIDAQLTLSGLAHIARLVPTSLLPPATVSGLSGN
SIO_010081: TPCCA_RS02110
subclass of: SO_0000673
so part of: TPCCA_RS02110
location: 455902..456723
location: region:455902-456723:1
so has part: feature:455902-456723:1:exon

WP_013945083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455902-456723:1:exon

TPCCA_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02115
old locus tag: TPCCA_0432
so part of: sequence
location: 456784..457317
location: region:456784-457317:1
so has part: feature:456784-457317:1:exon
subclass of: SO_0000010

position:456784:1
position: 456784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457317:1
position: 457317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456784-457317:1:exon

TPCCA_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02115
old locus tag: TPCCA_0432
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505494.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKRLCCIALVMRAFWYLSAKGVSIAYVPVHRSEGSQDSSMSTAVGDTLLNAFFDEGMVVTAVPPGVHDGQTIAEIAACFEVMPDYALLVQFHSARLPGGEGPTSRARGAWSSDRFRAVWTLVDLHTQRACVYACVAPYRESIPVSECVDVVTRCIAEQAISYIRVGTSTDTAGVQL
SIO_010081: TPCCA_RS02115
subclass of: SO_0000673
so part of: TPCCA_RS02115
location: 456784..457317
location: region:456784-457317:1
so has part: feature:456784-457317:1:exon

WP_245522194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456784-457317:1:exon

TPCCA_RS05665
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05665
old locus tag: TPCCA_0433
so part of: sequence
location: 457372..459651
location: region:457372-459651:1
so has part: feature:457372-459651:1:exon
subclass of: SO_0000010

position:457372:1
position: 457372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459651:1
position: 459651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457372-459651:1:exon

TPCCA_RS05665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05665
old locus tag: TPCCA_0433
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015026164.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKRHMFAKRGIKGRSYLVRVNTAFLVLCIASVTPLWAVWEGNAEIGPQGSFLQDGMFVRSDMFPKNTAVEISNLEKNAKAQAVVIGHAGIPGLLVSLAPAAAAQLGIGVYQAVRVRVRTLGTVRGGSQTSQDGLPLASLPSRVPARPAQRDPLSSPPAGHTVPEYRDTVIFDDPRLVSPLSREVEDVPKVVEPASERGGREREVEDAPGVVEPASERGGREREVEDAPGVVEPASERGGREREVEDVPGVVEPASERGGREREVEDAPGVVEPASERGGREREVEDAPGVVEPASERGGREREVEDAPGVVEPASERGGREREVEDAPGVVEPASERGGREREVEDVPGVVEPASERGGREREVEDAPGVVEPASERGGREREVEDAPGVVEPASERGGREREVEDAPGVVEPASERGGREREVEDAPKVVEPASERGGREREVEDAPGVVEPASERGGREREVEDAPGVVEPASERGGREREVEDAPGVVEPASERGGREREVEDAPGVVEPASERGGREREVEDAPGVVEPASERGGREREVEDAPGVVEPASERGGREREVEDVPKVVEPASERGGREREVEDVPGVVEPASERGGREREVEDAPGVVEPASERGVASQHTKQPSHSVSNSAPNQFRNPEGELPFTLPDLSESEIVVPEEQKGRAHPQVIPEGAPRGLQPGEYYVQIAVFHDTIQVQSIVHRYGVEYPIAVEQDIHEGKARFTVCVGPVQKDERGAVLENFQRFGFKDAFLKKAR
SIO_010081: TPCCA_RS05665
subclass of: SO_0000673
so part of: TPCCA_RS05665
location: 457372..459651
location: region:457372-459651:1
so has part: feature:457372-459651:1:exon

WP_013945085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457372-459651:1:exon

TPCCA_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02125
old locus tag: TPCCA_0435
so part of: sequence
location: complement(459749..460219)
location: region:459749-460219:-1
so has part: feature:459749-460219:-1:exon
subclass of: SO_0000010

position:459749:-1
position: 459749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460219:-1
position: 460219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459749-460219:-1:exon

TPCCA_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02125
old locus tag: TPCCA_0435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945086.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper resistance protein NlpE
translation: MKGSVRALCAFLGVGALGSALCVSCTTVCPHAGKAKAEKVECALKGGIFRGTLPAADCPGIDTTVTFNADGTAQKVELALEKKSAPSPLTYRGTWMVREDGIVELSLVSSEQSKAPHEKELYELIDGNSVRYMGAPGAGKPSKEMAPFYVLKKTKK
SIO_010081: TPCCA_RS02125
subclass of: SO_0000673
so part of: TPCCA_RS02125
location: complement(459749..460219)
location: region:459749-460219:-1
so has part: feature:459749-460219:-1:exon

WP_013945086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459749-460219:-1:exon

TPCCA_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02130
old locus tag: TPCCA_0436
so part of: sequence
location: complement(460351..461433)
location: region:460351-461433:-1
so has part: feature:460351-461433:-1:exon
subclass of: SO_0000010

position:460351:-1
position: 460351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461433:-1
position: 461433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460351-461433:-1:exon

TPCCA_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02130
old locus tag: TPCCA_0436
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881884.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional oligoribonuclease/PAP phosphatase NrnA
translation: MFSSSPPSSLPKSVSSPSSCAARTGDRGRGLSGLIEFIDAHRAFAVVGHEKPDGDCVGSSLALASFLRRIGKEVELLSAGPFKRREIAAYATLFRPSLSAQIRPSDQTAVIVVDCSELSRVGAELASQLAPFARAFIDHHETCGDHCAHSFVVKTAPSTTTLVQTLIETMAGSLEAAEARALFLGLATDTGFFRHLDEHSADTFASAARLVRAGANPKDTFLAMNGGRSLASRMLIARVLSRLTPYYGGALMTSYETCEDAVQLGLDVRDSDALYQLIQSIQGVEAIVVVRQESPTHCSVGFRSRGSIDVSVIAARFGGGGHRCAAGLRIEGTVDELLPRFVAAFEAQMRAPAAGAQVRS
SIO_010081: TPCCA_RS02130
subclass of: SO_0000673
so part of: TPCCA_RS02130
location: complement(460351..461433)
location: region:460351-461433:-1
so has part: feature:460351-461433:-1:exon

WP_013945087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460351-461433:-1:exon

TPCCA_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02135
old locus tag: TPCCA_0437
so part of: sequence
location: complement(461399..461863)
location: region:461399-461863:-1
so has part: feature:461399-461863:-1:exon
subclass of: SO_0000010

position:461399:-1
position: 461399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461863:-1
position: 461863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461399-461863:-1:exon

TPCCA_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02135
old locus tag: TPCCA_0437
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945088.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFSTRCLRLVLCASAIALSAQDASDTAERVLEPPPPGLIESNSSRMYYVNLPVVKVFSHRLGYRVIYRRANFEMAEIYLPSAWFSPRVGKVLLRHAPVRVDPYLSFFMEGNTLTYVKLTLPRSLSSPVWGTLKSPSEYDDKFDVQFQSPEFSS
SIO_010081: TPCCA_RS02135
subclass of: SO_0000673
so part of: TPCCA_RS02135
location: complement(461399..461863)
location: region:461399-461863:-1
so has part: feature:461399-461863:-1:exon

WP_245522195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461399-461863:-1:exon

TPCCA_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02140
old locus tag: TPCCA_0438
so part of: sequence
location: 462004..462768
location: region:462004-462768:1
so has part: feature:462004-462768:1:exon
subclass of: SO_0000010

position:462004:1
position: 462004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462768:1
position: 462768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462004-462768:1:exon

TPCCA_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02140
old locus tag: TPCCA_0438
EC number: 3.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505497.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: non-canonical purine NTP pyrophosphatase
translation: MRIYLASNNAHKHAEFSSLFPMHTILLPKDEGIDFFAPEDGSTFFANARQKADALYDVVHAPVLADDSGLCVDALDGDPGVHSARFGAQHGVHTDTARMQLLLERMHGRQDRACSFVCVAVLKLGSVPLCVGRGVCRGVLTTEMSGVEGFGYDPIFLLPHLGRTFAQLSIEEKNRVSHRALAALRLAQVLAMMQLPRALRYELKLLRGARRMTRGGVLRPGAPCAQRKGQTAQTARRHKFYARARRCARRIHRA
SIO_010081: TPCCA_RS02140
subclass of: SO_0000673
so part of: TPCCA_RS02140
location: 462004..462768
location: region:462004-462768:1
so has part: feature:462004-462768:1:exon

WP_245522196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:462004-462768:1:exon

TPCCA_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02145
old locus tag: TPCCA_0439
so part of: sequence
location: 462894..463367
location: region:462894-463367:1
so has part: feature:462894-463367:1:exon
subclass of: SO_0000010

position:462894:1
position: 462894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463367:1
position: 463367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462894-463367:1:exon

TPCCA_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02145
old locus tag: TPCCA_0439
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505499.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheW
translation: MAVNDEQFQLVTFQLGEELYGIDIMGVKEIVKVQDVRPIPCAPAYVEGIFNLRSEIIPIINLHKRFHLREATLESGDEYLGGFVILNVEDSKLGIIIDRIARVIAVSQEDVQPPPQVITGIGAEYIHGVVRQGTSYLIVLDIHKLFSSKELQKLANL
SIO_010081: TPCCA_RS02145
subclass of: SO_0000673
so part of: TPCCA_RS02145
location: 462894..463367
location: region:462894-463367:1
so has part: feature:462894-463367:1:exon

WP_041609993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:462894-463367:1:exon

TPCCA_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02150
old locus tag: TPCCA_0440
so part of: sequence
location: 463457..464608
location: region:463457-464608:1
so has part: feature:463457-464608:1:exon
subclass of: SO_0000010

position:463457:1
position: 463457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464608:1
position: 464608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463457-464608:1:exon

TPCCA_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02150
old locus tag: TPCCA_0440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945091.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DegT/DnrJ/EryC1/StrS aminotransferase family protein
translation: MDAVLTCLVDEKIGPGSLGSTLIQLVREVFSPIDAYVLRSPAIALSFALRALKLPPASPVLLSALAPFWHYREVLHQGLQPLVLDVDIHSGLLSRDVVETGIARGARALLVPETLGNVPPAAVFLELGIPVIEDSSQSVGAVLGEKKVGTFGSCVIVGLEAHDMLTAGGGAVLMAFEAACARRLQALVPEALAVDMLPDMNAALACVQVKQQEKNIALRRAIYDRYSSALLRTRHGTLHRCEQLEHSAYAFPVVLASGLKEVTRYVRQASIEISPAFEHSIVAAFQLPAMRRRWPFPQFLPTSASHTAPFQGEDREVLETTQGAEKTCQDSSWEKEVRASEITPEICWPHASALLLRCVRFPLYPRLAPAHAQEIARILGTLP
SIO_010081: TPCCA_RS02150
subclass of: SO_0000673
so part of: TPCCA_RS02150
location: 463457..464608
location: region:463457-464608:1
so has part: feature:463457-464608:1:exon

WP_013945091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463457-464608:1:exon

TPCCA_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02155
old locus tag: TPCCA_0441
so part of: sequence
location: 464617..465522
location: region:464617-465522:1
so has part: feature:464617-465522:1:exon
subclass of: SO_0000010

position:464617:1
position: 464617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465522:1
position: 465522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464617-465522:1:exon

TPCCA_RS02155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02155
old locus tag: TPCCA_0441
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505500.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(+)/NADH kinase
translation: MCPQRPVAKSSGDAKVLLIVSTYKPRAAVLAADVVNFLSVRGFQCHTIEYDGLNKESCARAGYMFAVSIGGDGTTLFAARCASPSGIPILAINLGRFGFIAPIEPRYWQQALSDYLAGGVRPAERALISCTVTRAGKEIASCLALNDVVLSSGRVARLTRAEVCFNDISFGVYEADGIILATPTGSTAYSAACGGPILDPDLDAFVLTPISALCLSNRPVVVPSSGVVRIKVLSMRHKETVLSVDGHELCTLQEEDQLLASRSSCSARLVFCTPHVFYRALCSKLAWSGSIFSRRGKRHDD
SIO_010081: TPCCA_RS02155
subclass of: SO_0000673
so part of: TPCCA_RS02155
location: 464617..465522
location: region:464617-465522:1
so has part: feature:464617-465522:1:exon

WP_245522197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464617-465522:1:exon

TPCCA_RS02160
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: recN
locus tag: TPCCA_RS02160
old locus tag: TPCCA_0442
so part of: sequence
location: 465515..467236
location: region:465515-467236:1
so has part: feature:465515-467236:1:exon
subclass of: SO_0000010

position:465515:1
position: 465515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467236:1
position: 467236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465515-467236:1:exon

TPCCA_RS02160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: recN
locus tag: TPCCA_RS02160
old locus tag: TPCCA_0442
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945093.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RecN
translation: MIEQLSVRNVALIQSLALEFGAQFTALSGETGAGKSMILGALSFLCGQKVGPDLIRKDENEAWVSAVFRCDHAPRAVHTWLAERSIEPEHHRVLLRRVMRRTGRGTAWIQNVPVSRADLEFFTSFFIDLHGQHEHQSLFRVAEHRRFLDTYGGLQQEVDAFTACYAALAERRAQLQRLASCEHNRQERLEFLSFALEELEHAALDVHEERALEGEEQKLCQHEKLCDVMQRVDAAIRGVDLQEGALLSSLKKALGALESACGIDGSLEPARARLESAYYEIEDVAHVLRTYADGIQFCPDRLQHVQERLALIYRLKKKYGGTVAQVLEYRARAQQEMQDLSQAVGDKEALEQDVQRLMAQVLHAGRALSLKRHAVAEAFRTRVEGVLHRLGMASTRFHVQICTRDEQCAKQRTGPYGFDDVEFLISANAGEPARPLAKIASGGELSRVMLALKTVLSSVDEAGTLIFDEIDVGIGGETARAVAEHLQALSEHKQVVCITHLAMIAAHADAHVCVKKESSGEHTNTSAAHVVGERRVQEVARMLAGDTHSATSLAHAQELLRAGARQRRGECGD
SIO_010081: TPCCA_RS02160
subclass of: SO_0000673
so part of: TPCCA_RS02160
location: 465515..467236
location: region:465515-467236:1
so has part: feature:465515-467236:1:exon

WP_013945093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465515-467236:1:exon

TPCCA_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02165
old locus tag: TPCCA_0443
so part of: sequence
location: 467178..468032
location: region:467178-468032:1
so has part: feature:467178-468032:1:exon
subclass of: SO_0000010

position:467178:1
position: 467178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468032:1
position: 468032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467178-468032:1:exon

TPCCA_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02165
old locus tag: TPCCA_0443
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460551.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRSCCAQARGREGGSAVTEEEQNALYQKKLNVYQGTIDQIFTREKNILELIRRDGTGAAYKKLALVDDMIYLSTLYAAKYQTQVVVVGGKQEDLLNEARKTLYKALIYLEEIVTNLIDAPFSDYQEQVAQIANVSQQQRYYLIRKMGLAIDSIISAYGTNTKWYWSFVELQARYATVAKNILDLANSSEIGLNPQADEYEIVVYHLRLVKKLLLQAAERYREKYEMTSSSFEDFKLAVCYLHALRRVHLLLNERQDAEEVKKKAKVWSERMEKDQRKRDRSDK
SIO_010081: TPCCA_RS02165
subclass of: SO_0000673
so part of: TPCCA_RS02165
location: 467178..468032
location: region:467178-468032:1
so has part: feature:467178-468032:1:exon

WP_013945094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:467178-468032:1:exon

TPCCA_RS02170
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02170
old locus tag: TPCCA_0444
so part of: sequence
location: 468164..469066
location: region:468164-469066:1
so has part: feature:468164-469066:1:exon
subclass of: SO_0000010

position:468164:1
position: 468164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469066:1
position: 469066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468164-469066:1:exon

TPCCA_RS02170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02170
old locus tag: TPCCA_0444
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945095.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MGGFFLSLAGCFLLAAAYGAAQTVHVIAKGETLFSLSRRYGVPLSALAQANNLANVHQLVPGQRVVVPRGYTVRRGDTLFSIARMLNCSLAALLAANGISAAHTIHPGDVLVIPPREKSPPTVAGADRILSVSSLPDGDQWARARADPVQTPVSPPAAVPAPERREISLRDPRQYISKKVDKNARWPVSPTSLAYVRGKTYGVVIDSERNAAVRALMSGKVISRGTHRGYGQVLFVESAGKHVYVYGGLERILPKSGDYVSAGDVLGNLGFDAAAARSRLYFMVYKKNKPIDPAQAPRGF
SIO_010081: TPCCA_RS02170
subclass of: SO_0000673
so part of: TPCCA_RS02170
location: 468164..469066
location: region:468164-469066:1
so has part: feature:468164-469066:1:exon

WP_245522198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468164-469066:1:exon

TPCCA_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02175
old locus tag: TPCCA_0445
so part of: sequence
location: 469202..469831
location: region:469202-469831:1
so has part: feature:469202-469831:1:exon
subclass of: SO_0000010

position:469202:1
position: 469202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469831:1
position: 469831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469202-469831:1:exon

TPCCA_RS02175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02175
old locus tag: TPCCA_0445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945096.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DJ-1/PfpI family protein
translation: MSVRVYLFVAHGFEEVETITPLDYLRRAGIALTLVGVGAEQVVSPRGLRVSCDCSLEALCASPGIADAACAADAVLLPGGLENCHTLAACAAVRDFVMRVHLRGGLVAALCAAPARVLSAWNLLGSRRYTCYPGMDPAVFSAHDDGVGKRTEEEESRALRKPERARVVRDGNLLTACAAGAAEEFSFAVIEALCGVEVAQSVRAQVVAR
SIO_010081: TPCCA_RS02175
subclass of: SO_0000673
so part of: TPCCA_RS02175
location: 469202..469831
location: region:469202-469831:1
so has part: feature:469202-469831:1:exon

WP_013945096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469202-469831:1:exon

TPCCA_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: ispG
locus tag: TPCCA_RS02180
old locus tag: TPCCA_0446
so part of: sequence
location: 469873..471087
location: region:469873-471087:1
so has part: feature:469873-471087:1:exon
subclass of: SO_0000010

position:469873:1
position: 469873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471087:1
position: 471087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469873-471087:1:exon

TPCCA_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: ispG
locus tag: TPCCA_RS02180
old locus tag: TPCCA_0446
EC number: 1.17.7.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881894.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO process: GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
translation: MDSSAGVSPCNSPYGSGLLDVPLKLRPRASHYRARSLVIGGKERVRALPLGGDAPIPIQTMWKEPLIGADLQSIVDRLLELEQLGCDVVRFAVPDKESAELFVALCARTRMPLVADIHFDYRLALRCMDGPVAKVRINPGNIGVRERVRAVVEKARATGTALRIGVNTGSLPGVVKRAVAARYADGMQSVNARAEALVQTAFAETAYLDQLHFDRVVLSLKASTVAETVRANELFAQQSDIPLHLGVTEAGPLVSGIVKSTLAFSQLLSRNIGATVRVSLSDSMEHEVLAAREILAECGKRAGGVRLVSCPRCGRIGFDVHAFVRRWQKELFSLKKDITVAVMGCVVNGPGEGKHADLGISGAEDSVIFFKRGKIVRRIQVRDLCADERTRVIDAAFKEELSSL
SIO_010081: TPCCA_RS02180
subclass of: SO_0000673
so part of: TPCCA_RS02180
location: 469873..471087
location: region:469873-471087:1
so has part: feature:469873-471087:1:exon

WP_193386061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469873-471087:1:exon

TPCCA_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02185
old locus tag: TPCCA_0447
so part of: sequence
location: 471084..472208
location: region:471084-472208:1
so has part: feature:471084-472208:1:exon
subclass of: SO_0000010

position:471084:1
position: 471084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472208:1
position: 472208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471084-472208:1:exon

TPCCA_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02185
old locus tag: TPCCA_0447
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881895.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNLIKAYAAGVMSAAFLFGSEGQVRSESDRVRGEDPWHLLQWAQVVYEREEFGDTLRYAQRARALRREQVEHQCRVLLRARTRAESAGIPETLSDLYALLKSRGETDACEVLDAIFLTHAPHVFQNSVSKLLQWLKDSAAFPEAELLLGKVFEGEGEYAQALQHYRNAWDTRAQLVVPDARFDIIYAMANVSRLLSQQDEREKYLLLVLSEDPLYSAREVRGKTLHAMLRTIRSSNTVEKFFKLYRHRNVLALRAYQELTEMYVRTDNIERALPVSVLAADIAISALDSFLRKIELTYQYKDLADLFLRTGSHPTISKWANEHGVWQTLLHFADLLYKKGLHAQARDMYYNLAEKCPAFEYARRAAYKLSLTL
SIO_010081: TPCCA_RS02185
subclass of: SO_0000673
so part of: TPCCA_RS02185
location: 471084..472208
location: region:471084-472208:1
so has part: feature:471084-472208:1:exon

WP_013945098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471084-472208:1:exon

TPCCA_RS02190
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02190
old locus tag: TPCCA_0448
so part of: sequence
location: 472266..473348
location: region:472266-473348:1
so has part: feature:472266-473348:1:exon
subclass of: SO_0000010

position:472266:1
position: 472266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473348:1
position: 473348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472266-473348:1:exon

TPCCA_RS02190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02190
old locus tag: TPCCA_0448
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881896.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil phosphoribosyltransferase
translation: MEGQTARRVITEAKFLDDCLTERDNYYLSKLDELYSSAMSSFAQFEDQQNGARSARAEENIIATYDSIGNLMQEICKELPALKVYSFETQRENHAEVSRVVSKLRNIHTGYSEFIYYTQRAFEMLFRLAYGGSHEEHKTYLITKTPVAFPVQNYAVHKIANVDYKIENTVMCVMLRGALLPSMIVSKEIEEYSSHGYVTPFALFKIKRDDLRDERDMQYVFDLDKSYFSARELDGKDLVFADPMNATGGSLVTIVRYLQDLGVKPKSISCFHMISALKGAIRVVRSLENCTVYTLWMDPVLNARAYIMPGLGDAGDRVNGVDVEDHPRNIIQLLADYGSNISGLYRSQLRKIEETVLGSR
SIO_010081: TPCCA_RS02190
subclass of: SO_0000673
so part of: TPCCA_RS02190
location: 472266..473348
location: region:472266-473348:1
so has part: feature:472266-473348:1:exon

WP_013945099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472266-473348:1:exon

TPCCA_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02195
old locus tag: TPCCA_0449
so part of: sequence
location: 473352..473942
location: region:473352-473942:1
so has part: feature:473352-473942:1:exon
subclass of: SO_0000010

position:473352:1
position: 473352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473942:1
position: 473942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473352-473942:1:exon

TPCCA_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02195
old locus tag: TPCCA_0449
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945100.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNGKQCFCFFLFHLFYTGLFACGKPESSLAPEYFDLAHAYVQLHRYDEARDYYMRAARDPAYYHAAQYNFARVCGLQNDWKTAVHALQPLYDADSANATIAAAYAYALLSFGETARALLLYQQLYERDQKNTQRILEYANVLVHAKKYIQAVEFLRQKKSLLSEAEDVRVLQSIVKKLKDSVPPHLIADFVSTDDL
SIO_010081: TPCCA_RS02195
subclass of: SO_0000673
so part of: TPCCA_RS02195
location: 473352..473942
location: region:473352-473942:1
so has part: feature:473352-473942:1:exon

WP_013945100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473352-473942:1:exon

TPCCA_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: fusA
locus tag: TPCCA_RS02200
old locus tag: TPCCA_0450
so part of: sequence
location: 474079..476130
location: region:474079-476130:1
so has part: feature:474079-476130:1:exon
subclass of: SO_0000010

position:474079:1
position: 474079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476130:1
position: 476130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474079-476130:1:exon

TPCCA_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: fusA
locus tag: TPCCA_RS02200
old locus tag: TPCCA_0450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945101.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor G
translation: MRQQQMRNIGIMAHVDAGKTTTTERMLFYTGKIHRMGEIDDGATTMDWMVQEQERGITIQSAATTVRWREVDITIIDTPGHVDFTAEVERALRVLDGVVVVLCAVGRVQPQTETVWYQADRYDIPRVCFVNKMDRIGADFFSVLDQVHNKFGIDAVALQIPIGSGTSFEGVIDLITMKEIFWDAASSGEQMEYRPIQSARIAQAREAREKMLDVISIYSDEVTECVLAGEHVPVQLLHAEIRKAVRERRYVPFLCGSSRHNLGVQPLLDAVVEYLPAPQERKAVEGFHVQKKEPVFIAPTAEGPLLALVFKIQYEREAGLLCYVRMYSGKLRTGDSIVNIGKKKRERVYRILRMHSNKSETVECIQAGDIAVIVGLKSAQTGDSVGDGSCPVVLESMHFPEPVISVSLEPMDASSRDKLQETLGILSREDPTFSVREDAETGQLLISGMGELHLDVLTTRMREDFNVQVRVGKPHVTYRESIRKTVEHTLRVQRVIGGKEYMAGLTLRVEARKRGAGNEFFCQVKELRGTVCTAHATPAGIIGAVEHAIRGAWDGGIQSGYPCVDVGVHLLSVEYQELTSSPFIFEAAAVQAFGEACVAAEPYVLEPIMSVELSCAQENVGDVMNVIIQRGGIILGMDSKHGRELVHAQAPMKKMFGFSTDVRSASRGGASFTMRFSHFESCA
SIO_010081: TPCCA_RS02200
subclass of: SO_0000673
so part of: TPCCA_RS02200
location: 474079..476130
location: region:474079-476130:1
so has part: feature:474079-476130:1:exon

WP_013945101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474079-476130:1:exon

TPCCA_RS05295
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05295
so part of: sequence
location: complement(476119..476301)
location: region:476119-476301:-1
so has part: feature:476119-476301:-1:exon
subclass of: SO_0000010

position:476119:-1
position: 476119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476301:-1
position: 476301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476119-476301:-1:exon

TPCCA_RS05295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881899.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSMQLVTVTVQGAMVADIAAAVKTAPHPFLYASVLQDSPQARKPVRETRYQKMSAFLCT
SIO_010081: TPCCA_RS05295
subclass of: SO_0000673
so part of: TPCCA_RS05295
location: complement(476119..476301)
location: region:476119-476301:-1
so has part: feature:476119-476301:-1:exon

WP_083815515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476119-476301:-1:exon

TPCCA_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: ileS
locus tag: TPCCA_RS02205
old locus tag: TPCCA_0452
so part of: sequence
location: 476580..479855
location: region:476580-479855:1
so has part: feature:476580-479855:1:exon
subclass of: SO_0000010

position:476580:1
position: 476580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479855:1
position: 479855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476580-479855:1:exon

TPCCA_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: ileS
locus tag: TPCCA_RS02205
old locus tag: TPCCA_0452
EC number: 6.1.1.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881901.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isoleucine--tRNA ligase
translation: MYTPVDPKVDFVAQERRILAFWRERRVFEQSVAQRAQGKSYVFFDGPPFATGLPHFGHFVPSTIKDIIPRYQTMRGAYVPRRFGWDCHGLPIEHLIEQELNLNSKSDVESYGVSAFNAACRSSVLRYVKEWQRTLTRLGRWVDFDNDYKTMDVCYMESVWWVVAQLWQRKLLYEGYKILPYCPRCATALSNHELNLGGYQDVSDPAITVRFECTSVVPGSPAAREFCAAASWGSASLPAHTCFLAWTTTPWTLPCNAALALGPQILYVLIEANDEHYILARSRLEFYYPDSSAYRVVWEKRGAHLAGIRYRPLFSYPVFGQGPDPSVQGDSEEGLFCTRVADFVSTEDGTGVVHVAPAFGEDDYEVFKDAGISIQCPLDAECRFTAEVADYQGLFVKAADKAIIARVQKQGALFRREQISHAYPHCWRCASPLIYRAVHSWFVAVEKIKDKMLAANASICWQPSHIRDGRFGKWLVCARDWAISRDRYWGNPLPIWRCVHCGATDCIGSRTQLYERSGMLLEDLHKHVVDMVTIPCACGSVMRRVPEVLDCWFESGAMPYAQQHYPFEHATDFERYFPAHFISEGLDQTRGWFYTLTILAVALFERPAFENCIVTGLVLASDGKKMSKALRNYADPNEVMDRYGADALRLFLVRSAVVRADDLKYSDEGVKDILKTVIIPLWNSYSFYVTYANIDGIDPPVCAEVDGMGQAVTRLATHLNNPLDRWILSLTEKLVQDIACALDAYDVSKVADPIVSYVDQLNNWYIRRSRRRFWKSINDEDKRCAYNTLYCVLKRCVLAIAPVVPFITESIWQNIRAADDVQSVHLADYPVCTPMVRDDALEFKMETVQRVVSMARAIRAQCNLKVRQPLKAMQVITRNPMERSALLEMEEDVLDELNVKELVFHEKEDEIVEYRAKANFRVLGKELGSKTKRAALSIERLSSAEIQEILEGTTLYLDVDGDRLELTEEKILVQRIERESLKAINEGTLTVALDTTLTEELLLEGAIRDLVRGVQNLRKERGFSLVDRICLRVFSSDQDIVCARKAYDLHKSYIVGETLAAHVQWARVRDGASAVYVKSDAVLWEVSIDKA
SIO_010081: TPCCA_RS02205
subclass of: SO_0000673
so part of: TPCCA_RS02205
location: 476580..479855
location: region:476580-479855:1
so has part: feature:476580-479855:1:exon

WP_013945103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476580-479855:1:exon

TPCCA_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02210
old locus tag: TPCCA_0453
so part of: sequence
location: 479899..480705
location: region:479899-480705:1
so has part: feature:479899-480705:1:exon
subclass of: SO_0000010

position:479899:1
position: 479899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480705:1
position: 480705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479899-480705:1:exon

TPCCA_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02210
old locus tag: TPCCA_0453
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505505.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLFASCTSGAWRASVDPLGVVGSGADVYLYFPVAGNENLISRIIENHESKANIKKIVDRTTAVYGAFFARSKEFRLFGSGSYPYAFTNLIFSRSDGWASTKTEHGITYYESEHTDVSIPAPHFSCVIFGSSKRERMSKMLSRLVNSDRPQLPPRFEKECTSEGTSQTVALYIKNGGHFITKLLNFPQLNLPLGAMELYLTARRNEYLYTLSLQLGNAKINFPIQFLISRVLNAHIHVEGDRLIIEDGTISAERLASVISSLYSEKGSS
SIO_010081: TPCCA_RS02210
subclass of: SO_0000673
so part of: TPCCA_RS02210
location: 479899..480705
location: region:479899-480705:1
so has part: feature:479899-480705:1:exon

WP_245522199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479899-480705:1:exon

TPCCA_RS05305
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05305
so part of: sequence
location: 480721..481071
location: region:480721-481071:1
so has part: feature:480721-481071:1:exon
subclass of: SO_0000010

position:480721:1
position: 480721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481071:1
position: 481071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480721-481071:1:exon

TPCCA_RS05305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05305
inference: COORDINATES: protein motif:HMM:NF024183.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc ribbon domain-containing protein
translation: MPATDVDHGRTTRVGVRFFCESCGSEVKRDARLCVHCGSFFSSIRCPSCKHAGNARDFEKGCPSCGYAFGNETRRKGSPPAPKGAPRRAEEALPAWVYAAICLLGVCVGTVAMWYL
SIO_010081: TPCCA_RS05305
subclass of: SO_0000673
so part of: TPCCA_RS05305
location: 480721..481071
location: region:480721-481071:1
so has part: feature:480721-481071:1:exon

WP_083815500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480721-481071:1:exon

TPCCA_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02215
old locus tag: TPCCA_0454
so part of: sequence
location: complement(481055..481744)
location: region:481055-481744:-1
so has part: feature:481055-481744:-1:exon
subclass of: SO_0000010

position:481055:-1
position: 481055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481744:-1
position: 481744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481055-481744:-1:exon

TPCCA_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02215
old locus tag: TPCCA_0454
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945105.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MMKALLVADDPVSVNLVFENHTQCGYEVIHYRSALKALDNMEEIQPQLLFINASDFPRHWKVLTQFFKHQSVCGARVILLVNTPSSSLSARQVAQAGVHALIDYTLSPEEGRKALCGVLTPSACAGSVDVDHAHACQADFVFTNPCSGSIVTGTVREVSEEGVDFIPDFPASVNNLQEQDVLEHCALKVAHDILGVRCSFHSSDGRILLRFIDPDASLVHAVRSVTGTT
SIO_010081: TPCCA_RS02215
subclass of: SO_0000673
so part of: TPCCA_RS02215
location: complement(481055..481744)
location: region:481055-481744:-1
so has part: feature:481055-481744:-1:exon

WP_013945105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481055-481744:-1:exon

TPCCA_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02220
old locus tag: TPCCA_0455
so part of: sequence
location: complement(481741..482715)
location: region:481741-482715:-1
so has part: feature:481741-482715:-1:exon
subclass of: SO_0000010

position:481741:-1
position: 481741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482715:-1
position: 482715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481741-482715:-1:exon

TPCCA_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02220
old locus tag: TPCCA_0455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342433.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLKRSLIVGGGLLLCCAHGYAQAKETRASVHIAYHNRTIYFPGTHESEPIWVKVSLTNTGKDTLRFKLADDRTFSVDFSIRTMKNRALAHTDEWIRKRSTHRPVYFREISLEPGESYSFVENVKHYLDVQSAGLYFLTLLFYPELKRERTGDEDHLASNTLTLEVQPAPAAAALGALPVSPPVGEVLQPQRLSPDRVIEYVLNARQKSHWERFFLYLDLAKMLSRDAGRSRRFNAESEAGRYNMIDTYKHELRQERVDKDIAAIPVEFRIEKTVYTATDAEVRVLEWFAYRDFREKKRFTYHLSSRDGIWYVHDYVVENLGTE
SIO_010081: TPCCA_RS02220
subclass of: SO_0000673
so part of: TPCCA_RS02220
location: complement(481741..482715)
location: region:481741-482715:-1
so has part: feature:481741-482715:-1:exon

WP_013945106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481741-482715:-1:exon

TPCCA_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02225
old locus tag: TPCCA_0456
so part of: sequence
location: complement(482802..484118)
location: region:482802-484118:-1
so has part: feature:482802-484118:-1:exon
subclass of: SO_0000010

position:482802:-1
position: 482802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484118:-1
position: 484118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482802-484118:-1:exon

TPCCA_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02225
old locus tag: TPCCA_0456
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945107.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTRLALVLCAVGSGVLSFSCARTAEPAPAASTHVPVTTAGALSVTPPSSTDRWYQFSRTDGRVHLRACPAPSQPSAPEHFVPWTEAVRLSAVDAQQELLLINRAGVLPATQLARMQAAPVPRKAPSTPAAETTSLTLTPPALLATQSAEGFYSEPIPSSSPHPCQGTGAVFVRLYTDPLFTTSPQDSAAPFLVRYDVRTARWTSVAYTRALGLPRNAQCTALTHTRGTWYASFKSSEAERVSFAHFSFPSLSSLENLEPTQRREHPIGRKVQVPRPISAAAFRAACTPQRLHLPTASTSSDHHSDLHELLVHRLLARVPLSPLYLSARSPCWASDRSFLKTAHRTADERAHHANALIFHPPRARLSAALLTDSGHLYFVREDGSEGHARLSALPPQFVYTSFTLSGPSLIAGWEEQDFFQVGSTGLLCTEVESLTGT
SIO_010081: TPCCA_RS02225
subclass of: SO_0000673
so part of: TPCCA_RS02225
location: complement(482802..484118)
location: region:482802-484118:-1
so has part: feature:482802-484118:-1:exon

WP_013945107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482802-484118:-1:exon

TPCCA_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02230
old locus tag: TPCCA_0457
so part of: sequence
location: 484270..485967
location: region:484270-485967:1
so has part: feature:484270-485967:1:exon
subclass of: SO_0000010

position:484270:1
position: 484270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485967:1
position: 485967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484270-485967:1:exon

TPCCA_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02230
old locus tag: TPCCA_0457
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505508.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSCLGARARGVLRISLVIMLQGLLRASEVDEELSKKYSIEIMVDSGVSERGERLPLLPFERIPDSHHVRRVIAQDWFLDEPSRVALRAPRSYTDETGNSFRVEAYVIAATEHLAVRVTPLLADRAPRDGVHSAPVAAAPRLHLALEAPTGTSRAGRTGADTPQSPVTDAAPSQAVAQGTWVLYRHMHTGAPVCIRVYPRESASLYVQLSAPTAVEMQGKTHLDVCLFNVHVRKHVALGLSFEQLYTYSLLQLRALTEHAVPWRIFDPPRTYSAVESMASIIKRRSYRLAPLEDGCFNEWGRPVHISDGSSQSDQEIIRALRVDQVPREIIGGVGSLGFAKWVVDGIIAPVAGQGVYLSALKKQTTMPRTHFNAAHERTRAPFFGIDWIRNLAAAALSLNVRRTVYPAQGGVDVTVEPFAVEGVPKGRIKQEARHPGIAPPSTPAGAVPPRVTQGETAAGPSRYLGYLPHAGYQTGYVRALFYYLAVMEPGHFYLGVLNEERGVPRLREYQRAAVFLPYFDRSGRFQVEVFEAARLSTLEEFVAQYPQQMLALVRVRAPEIGHFNP
SIO_010081: TPCCA_RS02230
subclass of: SO_0000673
so part of: TPCCA_RS02230
location: 484270..485967
location: region:484270-485967:1
so has part: feature:484270-485967:1:exon

WP_245522200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484270-485967:1:exon

TPCCA_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: scpB
locus tag: TPCCA_RS02235
old locus tag: TPCCA_0458
so part of: sequence
location: 486058..486636
location: region:486058-486636:1
so has part: feature:486058-486636:1:exon
subclass of: SO_0000010

position:486058:1
position: 486058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486636:1
position: 486636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486058-486636:1:exon

TPCCA_RS02235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: scpB
locus tag: TPCCA_RS02235
old locus tag: TPCCA_0458
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881907.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMC-Scp complex subunit ScpB
translation: MDQAEPCTLHGAPAPDLALLEAILFVEGVRLSYACLARKLGLSEQAVGEYVARLGEALASGARGGGGLELHCNEQGVALLPAATVRERLATLYGKRSEGRLSRAAMETLSIVAYAQPVTRAEIEAIRGVGADTMIRLLSERRLICEVGKKDIPGKPAQYGTTEEFLTAFRLRSIADLPKLDEEEQRRFELTR
SIO_010081: TPCCA_RS02235
subclass of: SO_0000673
so part of: TPCCA_RS02235
location: 486058..486636
location: region:486058-486636:1
so has part: feature:486058-486636:1:exon

WP_013945109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486058-486636:1:exon

TPCCA_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02240
old locus tag: TPCCA_0459
so part of: sequence
location: 486653..487450
location: region:486653-487450:1
so has part: feature:486653-487450:1:exon
subclass of: SO_0000010

position:486653:1
position: 486653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487450:1
position: 487450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486653-487450:1:exon

TPCCA_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02240
old locus tag: TPCCA_0459
EC number: 5.4.99.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342436.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pseudouridine synthase
translation: MQGRVCRLQPFFRLRLQVYLARSGCASRRACEALIASGRVTVDGQTVTTQGRTVCAQNVVCVDGTVVQLERVQRYVLLYKPVGYICSLAPQFPAGYAHTQVRAGPSRQEYARAIDLVQPAYQERLYHIGRLDVRSEGALLFTNDGSFAQALGHPRSGIEKEYIVETREPVPAALLSSFVRGVWVEGCRYRCVRARYLAAQCVQLVLVEGKKREIRVVFEAWGQDIVRLVRVRIGRVRLGPLRPGAFRTMSLQEVAQLLQCAGCAR
SIO_010081: TPCCA_RS02240
subclass of: SO_0000673
so part of: TPCCA_RS02240
location: 486653..487450
location: region:486653-487450:1
so has part: feature:486653-487450:1:exon

WP_013945110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486653-487450:1:exon

TPCCA_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02245
old locus tag: TPCCA_0460
so part of: sequence
location: 487580..488200
location: region:487580-488200:1
so has part: feature:487580-488200:1:exon
subclass of: SO_0000010

position:487580:1
position: 487580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488200:1
position: 488200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487580-488200:1:exon

TPCCA_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02245
old locus tag: TPCCA_0460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881909.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MNQFFEEFECPEHGRQPRGVQETAESLNCLALSCARKGWYEETVACLRKGLGLSPFNGLLWLNLALGYYALKRTVDSAGALYHALRCTPHHAAVWNMLGVVLHDMGDTEASRNAYEHAIRLETKNGATWNNYGLLLHTEQKYDQAQRAFETALSLLPRSGSALYNLSRTYHALGDARKAAVCRRILAQMPAGEKKPGPITPFALYP
SIO_010081: TPCCA_RS02245
subclass of: SO_0000673
so part of: TPCCA_RS02245
location: 487580..488200
location: region:487580-488200:1
so has part: feature:487580-488200:1:exon

WP_245522201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487580-488200:1:exon

TPCCA_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02250
old locus tag: TPCCA_0461
so part of: sequence
location: 488261..488617
location: region:488261-488617:1
so has part: feature:488261-488617:1:exon
subclass of: SO_0000010

position:488261:1
position: 488261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488617:1
position: 488617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488261-488617:1:exon

TPCCA_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02250
old locus tag: TPCCA_0461
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945112.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MEGIGVRVERVRCEQNLSKTAFARELGIGVEELDAIERGTMPLSRDLTLLLCVVFAVNRLWLESGEGEPFSASAVSPQETVQPEERAREPPIPPPGGADSGLGGLQCALFLAGWSLCL
SIO_010081: TPCCA_RS02250
subclass of: SO_0000673
so part of: TPCCA_RS02250
location: 488261..488617
location: region:488261-488617:1
so has part: feature:488261-488617:1:exon

WP_245522202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:488261-488617:1:exon

TPCCA_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02255
old locus tag: TPCCA_0462
so part of: sequence
location: 488669..489940
location: region:488669-489940:1
so has part: feature:488669-489940:1:exon
subclass of: SO_0000010

position:488669:1
position: 488669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489940:1
position: 489940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488669-489940:1:exon

TPCCA_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02255
old locus tag: TPCCA_0462
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342438.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MERIGKSCSPSRCRLCARRGRAARTADGASRVVRRIVCPPVLFLSASFLTGCDFSGIFASIQSEVPLKIPSIRGVVTGLVKCNDKLYACAGQLWEKNANMSEGEWKAVDFLPGKKITSIVSNGSVVYACVSGEGLYGYCSKGNGGTGRSPVVLGKTNGATRIVGSKNPFLQMPSKPDSESSGGGGGGCVVLSDDGINNENDENILGSGTGYVVTTKAVYTKSSGSGSGCTYAKDGTFDTATSPILGCTSDREGCFYVLDGTDVHCRTVQASGRSGGVAHCAVASRSVDSCKVAHTVTNPLCIAHVKNGNTEFLLIGGSRGYKEIKLETGSGGSTGCLRPGNVRGPEQWEECSVTPKGSVSQYEGTIGRFAISDIYTVDSTSGACGASSGSSGKPDVYVVVGDSQDGYTGLWRFDAQKKEWNRE
SIO_010081: TPCCA_RS02255
subclass of: SO_0000673
so part of: TPCCA_RS02255
location: 488669..489940
location: region:488669-489940:1
so has part: feature:488669-489940:1:exon

WP_013945113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:488669-489940:1:exon

TPCCA_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: trmB
locus tag: TPCCA_RS02260
old locus tag: TPCCA_0464
so part of: sequence
location: complement(489999..490691)
location: region:489999-490691:-1
so has part: feature:489999-490691:-1:exon
subclass of: SO_0000010

position:489999:-1
position: 489999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490691:-1
position: 490691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489999-490691:-1:exon

TPCCA_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: trmB
locus tag: TPCCA_RS02260
old locus tag: TPCCA_0464
EC number: 2.1.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013968934.1
GO function: GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (guanosine(46)-N7)-methyltransferase TrmB
translation: MTACQKRDYQHLAPRWIIPYQNTVLDYAAVFCSPAAPSAPAGAFPAPQGETNAVAPACAPAPLVVEIGFGMGSATAAIAARNPHLSYLGIEVYRAGIGRLLRKIEAERLHNLRIIEHDALDVLRTMIAPQTLAGLHIFFPDPWPKTRHHKRRLLYRPRTDLLARALAPGGYLYAVTDWAEYARRAQEELARTPSLTWAPQGARPWRPATEFERKAQTQGRAIHELFFIKA
SIO_010081: TPCCA_RS02260
subclass of: SO_0000673
so part of: TPCCA_RS02260
location: complement(489999..490691)
location: region:489999-490691:-1
so has part: feature:489999-490691:-1:exon

WP_245522203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489999-490691:-1:exon

TPCCA_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02265
old locus tag: TPCCA_0465
so part of: sequence
location: complement(490748..491617)
location: region:490748-491617:-1
so has part: feature:490748-491617:-1:exon
subclass of: SO_0000010

position:490748:-1
position: 490748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491617:-1
position: 491617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490748-491617:-1:exon

TPCCA_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02265
old locus tag: TPCCA_0465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881914.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQVLTVLHALSSPPWICLLRFNRMVLARQCAFVLVSCVVPCIAGAVLSSCMPFYARTEGLTLKRVYFEKAGKTDATLALHVTLEYPAPPEEYFYLEVEELRTGMRWVFGEKDTRVYIATDELHPGRRMLRVGGMQYPWGDFPAGTYVVYVRDSTGTYAQQRVTLGAGYPAHEPFPFSFSVDAQRWTLSTPAQPALVGPFTAHTHTSLVLLTRDYRTVAQHPLSLTSLPNARLSSPRVHTFEASMDALKTTHQDAYYLQCVVEDFQRSWRFISQPHRLYPEDALSEQAP
SIO_010081: TPCCA_RS02265
subclass of: SO_0000673
so part of: TPCCA_RS02265
location: complement(490748..491617)
location: region:490748-491617:-1
so has part: feature:490748-491617:-1:exon

WP_013945115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490748-491617:-1:exon

TPCCA_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02270
old locus tag: TPCCA_0466
so part of: sequence
location: complement(491550..492719)
location: region:491550-492719:-1
so has part: feature:491550-492719:-1:exon
subclass of: SO_0000010

position:491550:-1
position: 491550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492719:-1
position: 492719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491550-492719:-1:exon

TPCCA_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02270
old locus tag: TPCCA_0466
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881915.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSRHKRRILNLPLKLVLTQEGSEFFIKQNRKLMKLKLAEHVEDYGIALDAFAPKTVQGLLLSGYVSLIEVSPPEFASSRQEIIDLSKLIVHSILYRQYDCYVFRQILNSEVIKKWNRSNPGSSIDEHANLNAPFIYNHLKQHEAHVTQIKHHILRLLHASLAACEERTPKEKNTLLFLGEKFLDTLRPFTWFIISKFQHAPDMGSVLSSIHTSLAQYLNKARIAEYIALVLVELLINEENTNLKKEVQKLFPDLEDTQEALCDEGIRRRIVAELKHNAESLFISWKLEGRSVSTAGTRSKLKITVYGRNDYPQEMRNCLQDAKVVNADTDTLVDYCQQTIDTAKHANLGVYYISYLSEACKEANVRFESSLNRFTRSEFTTVDLSFAF
SIO_010081: TPCCA_RS02270
subclass of: SO_0000673
so part of: TPCCA_RS02270
location: complement(491550..492719)
location: region:491550-492719:-1
so has part: feature:491550-492719:-1:exon

WP_013945116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:491550-492719:-1:exon

TPCCA_RS05310
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05310
so part of: sequence
location: 492710..492958
location: region:492710-492958:1
so has part: feature:492710-492958:1:exon
subclass of: SO_0000010

position:492710:1
position: 492710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492958:1
position: 492958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492710-492958:1:exon

TPCCA_RS05310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881916.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSYFSALPLKCVRRPFILSRNEGWGIKRFYVADEPHRSFLCMQEGVRRGGGESEITPRKADVLRKSIRSADRYKEDRSCRT
SIO_010081: TPCCA_RS05310
subclass of: SO_0000673
so part of: TPCCA_RS05310
location: 492710..492958
location: region:492710-492958:1
so has part: feature:492710-492958:1:exon

WP_083815501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492710-492958:1:exon

TPCCA_RS02275
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02275
old locus tag: TPCCA_0468
so part of: sequence
location: complement(492928..494871)
location: region:492928-494871:-1
so has part: feature:492928-494871:-1:exon
subclass of: SO_0000010

position:492928:-1
position: 492928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494871:-1
position: 494871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492928-494871:-1:exon

TPCCA_RS02275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02275
old locus tag: TPCCA_0468
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945117.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MHKTFIALAAGLVLLLAVVAGFSLFSRGVVRARLPRAAGETLLEEEGVSEQELAWLETNQLLQEQGEEPGVLVDHHVQLSGNSDEEQFLQTLSEELAPQRPVPYAPTPRERMQEQDTRQKGARVLTPPRGVSRTASFSPEKSIKRAVQIATRPEVRAPAETATPQHHVHALLSEGKELTERRDYPGAVRVFNKAIRALPAGDAVFAADAYTRMGEAMYALSQHDNRDGFERTRALETATVYVKEALRLNPRSAAAHYLAACIADAQPDDDQTTALTLLERAAALDRREYRYSYELGKRLFAVRRFAEAQEAFNAATVANPKFEPAFFNLGLTCRVRAKHDLALQAFGAVIRLNPTHTRAWIELGRVHDAQGEVSAALADYQKAQECAAAAEAHDLYLTAARERARVLAKSGAKEEAVRLFQEILEQDSEDALTLYNLATVLLDLDRNEEALKHAQQAVYANGSQARFLYAYALAAQKTGRVDLALTQYQLAAARDPAHVKAHNNLGKLYLDKGALQEAETHLQAALAHDAQNFEVNSNLGKLYVLRAQWETAIAHSRRAATAQPQDREAQCQVARVYVAAGQPHEALRAYRAVLAQDARAWDVYLEAGKLAIKVNEKEYAQEVLTQLLDRNPDYAQAPHVRQLLSSL
SIO_010081: TPCCA_RS02275
subclass of: SO_0000673
so part of: TPCCA_RS02275
location: complement(492928..494871)
location: region:492928-494871:-1
so has part: feature:492928-494871:-1:exon

WP_245522213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492928-494871:-1:exon

TPCCA_RS02280
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02280
old locus tag: TPCCA_0470
so part of: sequence
location: complement(494873..495718)
location: region:494873-495718:-1
so has part: feature:494873-495718:-1:exon
subclass of: SO_0000010

position:494873:-1
position: 494873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495718:-1
position: 495718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494873-495718:-1:exon

TPCCA_RS02280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02280
old locus tag: TPCCA_0470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881919.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MCQKSSPCTYARVRSLPSVRLFSFLALAFASFLRAEDAFDHFREGERLLSLQQAQQAIGPLHKAAQQKPAHPKAALYLGMAYLQTGRYTQAIQWLQNPPVHSQEYAHLYAYNLGNVYFVQHRYEEAQHAYEQALALKHDYPPALLNRANTAMKRQAYAHALADYKKYVSQNPTASQHYEVQRMIAALEQWLQRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEFEALKRALRLKQAEDARTLSTGSEDTVPYQEERNLE
SIO_010081: TPCCA_RS02280
subclass of: SO_0000673
so part of: TPCCA_RS02280
location: complement(494873..495718)
location: region:494873-495718:-1
so has part: feature:494873-495718:-1:exon

WP_013945118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494873-495718:-1:exon

TPCCA_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02285
old locus tag: TPCCA_0471
so part of: sequence
location: 495746..497119
location: region:495746-497119:1
so has part: feature:495746-497119:1:exon
subclass of: SO_0000010

position:495746:1
position: 495746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497119:1
position: 497119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495746-497119:1:exon

TPCCA_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02285
old locus tag: TPCCA_0471
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505513.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MGGVSAYMALLAAALSSSIVFLLVFLMRGFSISRRQLLVEKSFRDGKYALAIKHAHAVLAKDPHNWAVRVLLGRAHLAEGKRDVALMELRAASSRAAFGKVVDEVEFRKTIAQLYLQFDQIEEALKEYTLLIRLDPTCADYHYRIGQLFERKNVTDRAAAYYRQCIGMDAAHPAAHAALGSLFLRSGHLAEARAELDTVLALEPANAEALFCQGQLLRKEREYAAALRSFEQASKSPVLRQKCFTERGCCYMDAKDVDRAIVEFDRALRCKSQSGANEDLQIRYLLASCYEKKRDVEKAIEQWEAINARSAGFKDVTIKLAQYQDIRLNDRMKEYLTLDGDSFFDLCQRIVSKALRLSIDSVQDVRGCCEIVATERDEKGWSNVRTQPKVVVFYREARVLDDSFLRAILERMKERGIARGVVVTSSSFSRAALSFAENRPLELLGKSELERLLDASS
SIO_010081: TPCCA_RS02285
subclass of: SO_0000673
so part of: TPCCA_RS02285
location: 495746..497119
location: region:495746-497119:1
so has part: feature:495746-497119:1:exon

WP_245522204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495746-497119:1:exon

TPCCA_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: uvrC
locus tag: TPCCA_RS02290
old locus tag: TPCCA_0472
so part of: sequence
location: complement(497132..499207)
location: region:497132-499207:-1
so has part: feature:497132-499207:-1:exon
subclass of: SO_0000010

position:497132:-1
position: 497132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499207:-1
position: 499207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497132-499207:-1:exon

TPCCA_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: uvrC
locus tag: TPCCA_RS02290
old locus tag: TPCCA_0472
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881921.1
GO component: GO:0009380 - excinuclease repair complex [Evidence IEA]
GO function: GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO process: GO:0006289 - nucleotide-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excinuclease ABC subunit UvrC
translation: MRPSESLVETLRIQALSAPSTSGVYLWKDVHGVVIYVGKAKSLRTRLTSYFRCRHDPKTRVLMSRAAALEYLQTQHEYEALLLENTLIKKHTPRYNICLKDGKTYPLLKLTCEPFPRIFRTRQFCQDGARYFGPFPDVQILDSFLKLILRTYKIRTCTTLRKRKNPCLYYHLKRCDAPCCGWVSPRTYQKDIHEITLLLEGNIDATAARLEKRMKRAVRQEAFEAAARIRDDIQAIRCITHKSLVQDMDERARDYIAWSSTGAIVTFAVLRMRGGKLNGRELFRTRSLKNEEEILSEFLITYYSDHTIPPHLFVHSSAGLAEHWLSHKAGTQCTVTLIPLHTFPTPQTPSSTVTTNAPTLAASQNSNAVQDSGLRSCNETSTMHTFQKAHDACTASEGTRENTPHESAHTPHHRAILAMAQLNAHEDITRYLKNRGADDALKELQKQLHLARIPTLIEGFDISHLGGKYTVASLICFKNGAPDTKNYRLFNLRAHDTRIDDFASMREAIARRYTHTPEGYTLPDLILVDGGIGHVSAAQHVLDALGLSIPLVGLAKRAEELFIPNSPTPLVLDRRNPALHMLQRIRDEAHRFAITRNRHLRTKKELVLSFERLPHVGKVRAHRLLAHFGSFRSLQSATPQDIATAIHIPLTQAHTILHAATRSTTTPVREKYKEHEHDPQGESPGPGRKTD
SIO_010081: TPCCA_RS02290
subclass of: SO_0000673
so part of: TPCCA_RS02290
location: complement(497132..499207)
location: region:497132-499207:-1
so has part: feature:497132-499207:-1:exon

WP_013945120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497132-499207:-1:exon

TPCCA_RS02295
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02295
old locus tag: TPCCA_0473
so part of: sequence
location: complement(499282..499926)
location: region:499282-499926:-1
so has part: feature:499282-499926:-1:exon
subclass of: SO_0000010

position:499282:-1
position: 499282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499926:-1
position: 499926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499282-499926:-1:exon

TPCCA_RS02295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02295
old locus tag: TPCCA_0473
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881922.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVTVSIVEIFLIISLPLLFFSSFADAGDPLQELISFVHGAVLAVPLLLLRSFFLGYYPPDSALVEEQWMRFFLFDYVFPLFCLPFFLFTSRSLERVSLVSGVSALFGAYTSFFFVHVYTQLNDPDLLARVMTLVLYMTNLLQLHAHVSFSMRTRLPLLGLIAALCIFLLMGAFSATVMTLYFFNARTVVYTSMLAGAGGVALLTHFFAVRMNVC
SIO_010081: TPCCA_RS02295
subclass of: SO_0000673
so part of: TPCCA_RS02295
location: complement(499282..499926)
location: region:499282-499926:-1
so has part: feature:499282-499926:-1:exon

WP_013945121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499282-499926:-1:exon

TPCCA_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02300
old locus tag: TPCCA_0474
so part of: sequence
location: complement(499991..500728)
location: region:499991-500728:-1
so has part: feature:499991-500728:-1:exon
subclass of: SO_0000010

position:499991:-1
position: 499991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500728:-1
position: 500728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499991-500728:-1:exon

TPCCA_RS02300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02300
old locus tag: TPCCA_0474
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881923.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YebC/PmpR family DNA-binding transcriptional regulator
translation: MSGHSKWATIKHAKGAADAKRGQLFTKFIKEISVAARMAGGDPQANPRLRTAILKARAANMPKDNIERAIKKGTGELSGSSYEELVYEGYAPGGVAVLVEVLTDNKNRAAANVRNLFSRNGGNLGSAGSVSYMFNRKGVIEYDSEQVDEEALMELALEAGAEDIQNAGGVLTVTTVPGTFETVLESLQAKGWESLSAGISMVPDTYLALDEETARKVLKMIDRLEEEEDVQAVYSNADIPSELVL
SIO_010081: TPCCA_RS02300
subclass of: SO_0000673
so part of: TPCCA_RS02300
location: complement(499991..500728)
location: region:499991-500728:-1
so has part: feature:499991-500728:-1:exon

WP_010881923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499991-500728:-1:exon

TPCCA_RS02305
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02305
old locus tag: TPCCA_0475
so part of: sequence
location: complement(500869..502476)
location: region:500869-502476:-1
so has part: feature:500869-502476:-1:exon
subclass of: SO_0000010

position:500869:-1
position: 500869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502476:-1
position: 502476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500869-502476:-1:exon

TPCCA_RS02305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02305
old locus tag: TPCCA_0475
EC number: 5.3.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342442.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose-6-phosphate isomerase
translation: MNWRNLDECAAYARLQAIRAPSLKTVLCGPEGIERVRRYCTDAGAGLRYHYAAKTVNEEILTALAALADEQELVAKYDALRAGTQINTGEKRKVLHHLTRLGVQGSSLASLPCEVRDMHAFYTKEYERVCAFARQVHEGGLRTSRGAPFTDVVQIGIGGSDLGPRALYLALEGWAQRHQAVKMRAHFISNVDPDDAALVLSKLPLETTLFILVSKSGTTLETLSNELFVAHVLRQAGLEPHTQFVAVTSETSPLANNPQYLASFYMDDFIGGRYSSSSVCGAVVLTLAFGPQVFGHFLSGAAEADRAAQEQDIRRNAALLDALIGVYERTILGHEHTAVLPYSQALARFPAHLQQLDMESNGKSVNRFGIPITYKTGPVIFGEPGTNGQHSFYQHLHQGTSVVPLQFIAFQHSQLGQDPIIRGSTGQQKLLANVVAQIVAFARGKEHADANKTFSGERPSSLLYAKALTPQTLGALLAHFENKIMFQGFAWNLNSFDQEGVQLGKTLAQHILAGEVEGVLRAYADLFDLAHAPTC
SIO_010081: TPCCA_RS02305
subclass of: SO_0000673
so part of: TPCCA_RS02305
location: complement(500869..502476)
location: region:500869-502476:-1
so has part: feature:500869-502476:-1:exon

WP_013945122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500869-502476:-1:exon

TPCCA_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02310
old locus tag: TPCCA_0476
so part of: sequence
location: complement(502540..503886)
location: region:502540-503886:-1
so has part: feature:502540-503886:-1:exon
subclass of: SO_0000010

position:502540:-1
position: 502540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503886:-1
position: 503886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502540-503886:-1:exon

TPCCA_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02310
old locus tag: TPCCA_0476
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881925.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetate kinase
translation: MIILTLNCGSSSVKYQVYNWTERAVIAVGVVERVTQAGSVITHEVHGRENHVRESPCPTHTEAVQLIISTLTDAHVGVISDMSLIKAVGHRVLHAADRFVKSVVVTPDVLETFRSVQDLGPLHNPANIRGIEAAQAVIPSVPHCAIMDTAWHQTMPEASFMYAVPRQWYEEYAVRRYGFHGTSFLYTAKRASVILKKRAEDTNIIIAHIGNGASMCCVKNGVSFDTSMGITPLEGLIMGTRCGDCDPALAFYIMRKTGMSVSDIDTTLNKQSGLLGITGKYVDRRDVCAAMKNGDALARLAFDMEVHRIRKYFGAYVAALGKQPDALVFTAGVGEMCCDVRAAACAGLEHLGIRLDARKNELARTRNAETEISTDDSPVRILVIPTDEELVMTEDTYALMQGTYDVHTRFTYSFQDPTYVNKARAAGLKRDLEKNPALATIVVPRLDT
SIO_010081: TPCCA_RS02310
subclass of: SO_0000673
so part of: TPCCA_RS02310
location: complement(502540..503886)
location: region:502540-503886:-1
so has part: feature:502540-503886:-1:exon

WP_010881925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502540-503886:-1:exon

TPCCA_RS02315
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: pgl
locus tag: TPCCA_RS02315
old locus tag: TPCCA_0477
so part of: sequence
location: complement(503975..504679)
location: region:503975-504679:-1
so has part: feature:503975-504679:-1:exon
subclass of: SO_0000010

position:503975:-1
position: 503975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504679:-1
position: 504679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503975-504679:-1:exon

TPCCA_RS02315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: pgl
locus tag: TPCCA_RS02315
old locus tag: TPCCA_0477
EC number: 3.1.1.31
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342443.1
GO function: GO:0017057 - 6-phosphogluconolactonase activity [Evidence IEA]
GO process: GO:0006098 - pentose-phosphate shunt [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-phosphogluconolactonase
translation: MKKHIFEDARAIAAFLVSVFDSRLKTQEILWLALSGGSTPREIFRTWAHEFRHHLDWKRLRFFWSDERCVPPTDAQSNFNMTHSALLEPLEINPDAVFRVRGEDAPESACAAYSQEIEARLPRQRGVPCFDIILLGMGADGHTASIFPHEIELWDHSGCCVVATHPDTGQKRVSFTGQLINNAHEIYVVVTGREKQDMLASVASDPHASVPVARVDTAKAQWLLDTAAAGAISA
SIO_010081: TPCCA_RS02315
subclass of: SO_0000673
so part of: TPCCA_RS02315
location: complement(503975..504679)
location: region:503975-504679:-1
so has part: feature:503975-504679:-1:exon

WP_013945123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503975-504679:-1:exon

TPCCA_RS02320
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: zwf
locus tag: TPCCA_RS02320
old locus tag: TPCCA_0478
so part of: sequence
location: complement(504740..506287)
location: region:504740-506287:-1
so has part: feature:504740-506287:-1:exon
subclass of: SO_0000010

position:504740:-1
position: 504740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506287:-1
position: 506287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504740-506287:-1:exon

TPCCA_RS02320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: zwf
locus tag: TPCCA_RS02320
old locus tag: TPCCA_0478
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945124.1
GO function: GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
GO process: GO:0006098 - pentose-phosphate shunt [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose-6-phosphate dehydrogenase
translation: MGKISGSGTVAPHILVIFGASGDLAARKLIPSLWDLFEQELLPRTFGILGAGRTALSTESFRARLAEAVTKHAVRTPHDPARLTEFLQKIHYFSFDPTDSVAFANFATYVRTLDQSLHTEGNFIFYLATPPSLYETIPTQLAMHHLNREQGNFRRVVIEKPFGYNLETAQHLNASLRAHFQENQTYRIDHYLGKETVQNILVTRFANPLFEPTWNRTHIDYVEITASESLGVENRGGYYDQSGALRDMIQNHLLLLLGIIAMEAPAVVSSSRLRDEIVKVFDCLRPMGERDVMQHTVRAQYVAGKIRGVAVPGYLEESGVDPRSCTETFAALKCYIDNWRWMDVPFYLRTGKRLPTRVTEVIVHYRTLPIALFERIERPCAREGNALVIRIQPDEGIQLKIDLKEPGAGFKTIPVSVDFQYSALTYSHLPSAYERLLLDCMNGDNTLYHRDDAVESAWRFIDPILAAWKSNKSPLLTYPAGSWGPKAADDLIKGSALRWHHPSSTLLSDDFACRL
SIO_010081: TPCCA_RS02320
subclass of: SO_0000673
so part of: TPCCA_RS02320
location: complement(504740..506287)
location: region:504740-506287:-1
so has part: feature:504740-506287:-1:exon

WP_013945124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504740-506287:-1:exon

TPCCA_RS02325
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02325
old locus tag: TPCCA_0479
so part of: sequence
location: complement(506359..506964)
location: region:506359-506964:-1
so has part: feature:506359-506964:-1:exon
subclass of: SO_0000010

position:506359:-1
position: 506359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506964:-1
position: 506964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506359-506964:-1:exon

TPCCA_RS02325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02325
old locus tag: TPCCA_0479
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2715 domain-containing protein
translation: MGIQWHTARGGVRARCVVRVGSLLAVLGMGAGVFAAEVFVSPKVGQVGAHPWGKEPASRTEVLPYTPTLGLAVGVIAHNGFAFTTELDAGLSSLMFRAQFLVGWAIRSGKNFAFIPSLGVDVLSTRDDKLVGIPINLDFLIFFTKHVGLDFTFGSGVNVPLTKNLKKGANGNGQDLTWSSIWTGYCCTSLVMVKIGPVFRI
SIO_010081: TPCCA_RS02325
subclass of: SO_0000673
so part of: TPCCA_RS02325
location: complement(506359..506964)
location: region:506359-506964:-1
so has part: feature:506359-506964:-1:exon

WP_013945125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506359-506964:-1:exon

TPCCA_RS02330
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02330
old locus tag: TPCCA_0480
so part of: sequence
location: 507146..507634
location: region:507146-507634:1
so has part: feature:507146-507634:1:exon
subclass of: SO_0000010

position:507146:1
position: 507146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507634:1
position: 507634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507146-507634:1:exon

TPCCA_RS02330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02330
old locus tag: TPCCA_0480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881929.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2062 domain-containing protein
translation: MIRALFSLFRSLHANTHPADLAHAAALALALALLPRSSLLWYLLFAVCFFIRLNRGLLLLSLVLFGFVVPSFDPWLDSLGNWALCLPRLQPVYRALIEIPFVGLARFYNTMIAGGLVAGALCYLPCYALARCAVTAYRTYLYPKIHHATIFFLVRNAPLCKR
SIO_010081: TPCCA_RS02330
subclass of: SO_0000673
so part of: TPCCA_RS02330
location: 507146..507634
location: region:507146-507634:1
so has part: feature:507146-507634:1:exon

WP_010881929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507146-507634:1:exon

TPCCA_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02335
old locus tag: TPCCA_0481
so part of: sequence
location: 507666..509915
location: region:507666-509915:1
so has part: feature:507666-509915:1:exon
subclass of: SO_0000010

position:507666:1
position: 507666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509915:1
position: 509915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507666-509915:1:exon

TPCCA_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02335
old locus tag: TPCCA_0481
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015026168.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR03545 family protein
translation: MSDDSTPKTPSRRIRHTGRRRTLHRFFCKRYTPRSLKRFLRRIHIPADRAYCMRYLADPVSTPVRVFGRTLLSRTYVRFDQQAIAHSADLKRLNAIAASIAKQRGRVNFWSLSMACASVLALLGLVYLIRNVIARRVVIGGSEAVFGARCEAAVVDLDLFNARFRLKNYAVANKHHPMWNLFEIENIDIHFDLLELSRGKFVSHTMVVEGVTWNTPRKTSGALPPRRAKRQRVRSSNPLIAKIQEKAAELAAPVSFGAGFSALKAQVDPRILLEREVKALKTPTLVQHVGAQAPKLAERWTQRVFDAHARAEKTVAAIRAVTELDFHALKDVSAIKQGIETLDRARRSTEEALATARTISHELQQDVHSTLGLAREFTAAVKADGARIARAAAAIRDIQADGGKKFISGLCTVFLARSFSHYYPYVAQMLDYVRGSQRTPSDGSPSAEAEKTAQSLTTRKRLAGSNFLFERNVPSVLLRNIGVSAADPQTRFSVAARVRNASNDAHGFGEPISFLLDVAAGAQDASLRGVVDLRRAHPDLVDVSCTARGIPLAVPAPAEGFPELSGVLGLHTQVFVRKDHSVELKMGARISDSVLRAAPFEPRVLFDVYADVLRQIQQIAFEATVRVSAEGALSISVESDADGAFVRALSRAFAQQVDALRRAVIAEGERFLAQQRRVYAQEIAQVTQLVSRAEDAIAQLGVSSRVIQQKRAEAERLLEAAARKALGEVTKRAADELQNKARDAFRSFF
SIO_010081: TPCCA_RS02335
subclass of: SO_0000673
so part of: TPCCA_RS02335
location: 507666..509915
location: region:507666-509915:1
so has part: feature:507666-509915:1:exon

WP_013945126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507666-509915:1:exon

TPCCA_RS02340
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02340
old locus tag: TPCCA_0483
so part of: sequence
location: complement(509982..511106)
location: region:509982-511106:-1
so has part: feature:509982-511106:-1:exon
subclass of: SO_0000010

position:509982:-1
position: 509982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511106:-1
position: 511106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509982-511106:-1:exon

TPCCA_RS02340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02340
old locus tag: TPCCA_0483
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505516.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fibronectin type III domain-containing protein
translation: MSIISRVCIPCAVLLFAQLHAKELVHVSQLKEQEARISWQEVPGAVSYRVLIRNAHGRIVTNAVATTRSYSFSQLRPGSYQYQIIAYDVLHRASASAWTSLSIEKVHKPKTGGITPSTIEHVVGGEAYTVVLDRSWTYEKGWTIALFPDDKADEAGAYVKPLSVSKNKEGNWMVAIPNAALKTGSYTLRAITPRNIYAEVRGILRVMLWRRPIFFYYDLSVGYAPVYRPQDHAATINGVSDFFKICSPIGFVGTFEMCFFKRNSSTISAGFNAQMHSDSKQVDVKLDGNFAYLYELYPRIEVGGMLGLGYSLPFGQRSSDDSMYTYVTGTMKYFFTNSIYLRVQQQHMLTVKPSFQGVSLQQTPSLSFGYRFHN
SIO_010081: TPCCA_RS02340
subclass of: SO_0000673
so part of: TPCCA_RS02340
location: complement(509982..511106)
location: region:509982-511106:-1
so has part: feature:509982-511106:-1:exon

WP_193386058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509982-511106:-1:exon

TPCCA_RS02345
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02345
old locus tag: TPCCA_0484
so part of: sequence
location: complement(511093..513108)
location: region:511093-513108:-1
so has part: feature:511093-513108:-1:exon
subclass of: SO_0000010

position:511093:-1
position: 511093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513108:-1
position: 513108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511093-513108:-1:exon

TPCCA_RS02345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02345
old locus tag: TPCCA_0484
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881933.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FecR family protein
translation: MTDRRRSMSCVHFFPLKSRGFLPTLTLKKRSMKLSKQDTTVTVVILLLILPLGWGYSRALRLSQGKGNPIGRVFFYKKTATRKKNNQALWLKLKDGAPVYHRDVLRTTTGSEAVIVFTDNSRLDIAENTMVRISHTGMKKKDVRLVTGAMRYARAAGNPTAHTVHVGKTTISLSGDGQVNVRGGERDSTVEIARGEALLHDAQGQTLPLQTFTQLAASREDGTVRILHPTFVPLLPDQDALLLTAEHTRSVGFVWLGDATTVQPSVRLQISRYADFSVIETERKLTLPHEANASRTTFKTSERLGEGRWFWRLVPQNGMASAPRSFSVRRARKVMLHTPRAQAVLSYRDAIPPTLFSWTSVEDVEQYRLLLSSRADFSTDVKTFSLRTPEISVPGLGEGTYFWKVVPRFDEGIEDPAFASEVGTFSIKQGKELHAPVALFPAEDEVLEHADRENRMVIFTCEPIPEARRYVWTVKNMDANASPLVTTTSVPFLTVPMRSLRARLQEGTYQWQVAWETRRSDRSPYSALRAFTVIEGMHAWEEEPETRDLIALRAPSFVLRDMPALITEKYLLQHRALRCKWTAVHNAQRYTVTLKNKKTDAVLQTATTTGVEFSFTNLAHLEEGSFHWVIQAHTEQEGYEPASAQTVRAFTIRVSELERPRAKEIVRYEYH
SIO_010081: TPCCA_RS02345
subclass of: SO_0000673
so part of: TPCCA_RS02345
location: complement(511093..513108)
location: region:511093-513108:-1
so has part: feature:511093-513108:-1:exon

WP_013945128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511093-513108:-1:exon

TPCCA_RS02350
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02350
old locus tag: TPCCA_0485
so part of: sequence
location: complement(513002..514846)
location: region:513002-514846:-1
so has part: feature:513002-514846:-1:exon
subclass of: SO_0000010

position:513002:-1
position: 513002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514846:-1
position: 514846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513002-514846:-1:exon

TPCCA_RS02350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02350
old locus tag: TPCCA_0485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881934.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylate/guanylate cyclase domain-containing protein
translation: MSRKNANQKIVWPLTTKLIGIISTVVVLATIAVTAMASWFFASSLHSNAELNNLAAAENFAAQIKGEFEAIATSAKSFVSLGLRSGTRMHSRSALSKDFFSFYPRIGYIGVGGVAELWNGDFFKQNQLRVADARRFLADNAQVISTLQTAPATLNAAPWFKAQIIAIVAPFEVDGATRNVVVIFSADVIQHLLESGASSGTMYAVTWAGNSLYHPEYSLNYSNVNLQDSPVVRDLRESTQLTKQISFIGTDNKRYFGAFAKQTFGKFAIVLETPMSVVYQAVYYAIILDGILTGMVLLASILLVWFIAQSITRPILTLVGATHAISSGQFLLDIKPSSKDEIGLLTETFVSMGRGLAERERMKEAFGKFVNRDIAEKAMKGELALGGERKTATIFFSDVRSFTEMSEKLPPEDVVEFLNEYMSCMVDCIEQTGGVVDKFIGDAIMAIWGAPVSLGSARLDALQSMKAVFLMRESLIQLNEKRVACSKPRIGIGCGVNTGSCVAGQIGSSKRMEYTVIGDAVNTASRIEALNKPFGTDFLISENTYELVKDMLIVEKMPPIKVKGKREPLNVYAAINLKGHDGPQTLDELRALLSIEKPGLSADPDFEEKKYEVI
SIO_010081: TPCCA_RS02350
subclass of: SO_0000673
so part of: TPCCA_RS02350
location: complement(513002..514846)
location: region:513002-514846:-1
so has part: feature:513002-514846:-1:exon

WP_013945129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513002-514846:-1:exon

TPCCA_RS02355
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02355
old locus tag: TPCCA_0486
so part of: sequence
location: complement(514843..516438)
location: region:514843-516438:-1
so has part: feature:514843-516438:-1:exon
subclass of: SO_0000010

position:514843:-1
position: 514843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516438:-1
position: 516438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514843-516438:-1:exon

TPCCA_RS02355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02355
old locus tag: TPCCA_0486
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342448.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P83/100 family protein
translation: MKNVLPMCAVLGAGCLFALEVDRRELERANATVEFENFAGTHTDVDSAAAIRRIGEGLASALRGGVAGDRARYALIHAVDPHTTNGFDADILIIGAQARVDHIDNIRAIVAAYLSAAYGYRLQDARTIATFATVYNAVYRADLPTFKARYKGVVTAHLSPEHVGIARRFDQWPGKTQLVIPLSGHSDALSAVDTGAISDKRVVERLREDPDKNIDLRKDMIDLKEREAQEGTRRAQQLAQQSQQAQERAAELSTQAQRAQAHADKTRREAQQAQQAAQNSPDPARTQEAEEKERVAERAQQEAQQAAHTAQKAAEQAESLAREARSQEQRAQQKSAEAQRERLEVAGDMQRMMNAGRAKATHGAQEARESVAPCYGLKVVDAQHLLSEIVLVDPKTEAPLRSSSLRTVRNRLLYSEPHALVAIADTTGNGTVRLVHIDPKTLEVTKESTQRIAAQSFLLREEEHYYAVIDENGSHFLGRFTKNLELTARSAAQVTPYTAVTVTPRGIMVQTKEKGMALLHTRTLADAVPRT
SIO_010081: TPCCA_RS02355
subclass of: SO_0000673
so part of: TPCCA_RS02355
location: complement(514843..516438)
location: region:514843-516438:-1
so has part: feature:514843-516438:-1:exon

WP_013945130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:514843-516438:-1:exon

TPCCA_RS02360
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02360
old locus tag: TPCCA_0487
so part of: sequence
location: complement(516527..518371)
location: region:516527-518371:-1
so has part: feature:516527-518371:-1:exon
subclass of: SO_0000010

position:516527:-1
position: 516527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518371:-1
position: 518371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516527-518371:-1:exon

TPCCA_RS02360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02360
old locus tag: TPCCA_0487
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342449.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PQQ-binding-like beta-propeller repeat protein
translation: MVLAGQNVTQPVRYDSLIYTFSADRALNCVNSKGSFVWRRNCPVVGTPFLSVSDDGLVYVSEVSGRVWVFSSQGIPVREFAVLPAATRGAKRAVNAANGGLCTAPVILRDGRLLYTTAHALLCFSSTGQRLWSQKLGAKPLLPPTDAKTREFFITGPQGTVEYWSIFGEKKGALRASGSVRALTSTPRGYVVATDQGLWRVRTDTLSSTTDKTQAGKTAKQHQAPVPVRISTQRSCVALFATENMLIALFADGAVRAYDADGENELFSLTLPCTFSSAAQCRVQGDEIVLSDTARAITLSAGGALKWNISLYETPFTPLITTDGLVVSAGGWVLNAYRAETRLIDHTPIYNRDSYFHVLGSSRRAHVQEAPPSRPAAPAKRSPYDSIFSSDPFFSSAKESFRSFSPESAFSSDPFFSSPTPAKNSGKTDNAQKTHTTSPPGPYATPELLFQAVQTSLKEGNVGPREPAYARSLHALLTSPHHARARAPAVTSARRAQAATLLGALGAHEYRDALLELLKEQDYTVLEGILKGLTRCTFGPDDRALLALYRVTRAKDARAESLMRAACDALAACARSAPRTLSEKAVSELSRISTGAFPYAIRAYARTLVQSMLR
SIO_010081: TPCCA_RS02360
subclass of: SO_0000673
so part of: TPCCA_RS02360
location: complement(516527..518371)
location: region:516527-518371:-1
so has part: feature:516527-518371:-1:exon

WP_245522205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516527-518371:-1:exon

TPCCA_RS02365
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02365
old locus tag: TPCCA_0488
so part of: sequence
location: 518399..520936
location: region:518399-520936:1
so has part: feature:518399-520936:1:exon
subclass of: SO_0000010

position:518399:1
position: 518399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520936:1
position: 520936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518399-520936:1:exon

TPCCA_RS02365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02365
old locus tag: TPCCA_0488
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460561.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MCGATACGARICKAERQEHCEGAVPYGYAHPFCTVLVLVSLREGVYPFTHCGCLRSELCVGSNGRCLKRAAPDALRMCLRGAHAPCGAELFPVKPCKRKNACGRIGPRWVKGLVTFHSHIIVLREWLMGYGSSAEETSSTPHASGQRKVGFLSLRTKLALVFGLLAFVSGLVQGGILVVLARSSIIREISSHLADRARDTSAVAEGRIGALFQFLEGLARLEVLQGSSDRRRAQVDRLGREAFFNRDITRLAVVDRAGVLYAEDGSTHYVQDRKYFQQAVKGRRYVSAPYRSRSSNDMVITFSVPVYGEDRQIIAVLAADVIWTWLCDITGDFSVGGTGKSAIFDEVGTIVAHPRHEVVEQQTNYIRLAKEDPATYASVSEFVEKIIKSDSVGSHAFSHEGSEKIGSYAKMKSTGWTVVVFATVSEFMGPVYTLQNYLLAVGIIVVLFSLIVVYAVARKIVRPLRSTVRVLEDTAYGEGDLTVRLPVVGGDEVSLLCQYFNQTMEKIRFAIATVGSSSDDMRRIGDELASNMTETASAVNEITANIDGVKHQVDLQVSGVSEATDTVERIIKTIKGLNSSIETQAVNVAQSSSSVEQMVANIVSITQTLERSDEAVHSLAIATADGRDTLVSSIGITQKISEESGSLLEASSVIQHIASQTNLLAMNAAIEAAHAGEAGKGFAVVADEIRKLAEESSTQGKTITETLKTLSVEIDTLSTSSRAVEEQFDTIFRLSDQVRTMSRSLTEAMKEQSDGSREVLAAIKSINAATVDVKEGSADMLKGGEVIAREMQRLDDLTSEIAGSMNEMAAGAIEINNAVHEVNEITQRSKQSISSLADEVEKFKV
SIO_010081: TPCCA_RS02365
subclass of: SO_0000673
so part of: TPCCA_RS02365
location: 518399..520936
location: region:518399-520936:1
so has part: feature:518399-520936:1:exon

WP_013945132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518399-520936:1:exon

TPCCA_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02370
old locus tag: TPCCA_t0019
so part of: sequence
location: 521049..521123
location: region:521049-521123:1
so has part: feature:521049-521123:1:exon
subclass of: SO_0000663

position:521049:1
position: 521049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521123:1
position: 521123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521049-521123:1:exon

TPCCA_RS02370
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS02370
old locus tag: TPCCA_t0019
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:521084..521086,aa:Thr,seq:tgt)
SIO_010081: TPCCA_RS02370
subclass of: SO_0000673
so part of: TPCCA_RS02370
location: 521049..521123
location: region:521049-521123:1
so has part: feature:521049-521123:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:521049-521123:1:exon

TPCCA_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02375
old locus tag: TPCCA_t0020
so part of: sequence
location: 521133..521214
location: region:521133-521214:1
so has part: feature:521133-521214:1:exon
subclass of: SO_0000663

position:521133:1
position: 521133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521214:1
position: 521214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521133-521214:1:exon

TPCCA_RS02375
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS02375
old locus tag: TPCCA_t0020
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:521167..521169,aa:Tyr,seq:gta)
SIO_010081: TPCCA_RS02375
subclass of: SO_0000673
so part of: TPCCA_RS02375
location: 521133..521214
location: region:521133-521214:1
so has part: feature:521133-521214:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:521133-521214:1:exon

TPCCA_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02380
old locus tag: TPCCA_0489
so part of: sequence
location: 521396..522364
location: region:521396-522364:1
so has part: feature:521396-522364:1:exon
subclass of: SO_0000010

position:521396:1
position: 521396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522364:1
position: 522364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521396-522364:1:exon

TPCCA_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02380
old locus tag: TPCCA_0489
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945133.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MRVHFWGVRGSVPTPVTPRQVQSKIAAVVQRISAKDVRNQRSKERFISDLPAWLFGTTGGNTTCVEMETDCGETLIFDAGTGIRDLGIDLMSRPGYRAQGHVYHLLFTHFHWDHIQGLPFFNPAFDPRNTIIVYSTRKKMKEFLEDQMRYPYFPISMFGRDGFNAKFEFRLIGNHEECFTIGKTKITWNRVRHPGGCVSYAVSEAGGKKVIFSTDTELRQKDFDRSERNVCFYDAASLLIIDSQYTMTESIKKEGWGHSTFSIVVDFAVSWGVRRLALFHHEPTYDDKKLFSILQNACWYRKYVGAHDLEILLAQEGKDIFV
SIO_010081: TPCCA_RS02380
subclass of: SO_0000673
so part of: TPCCA_RS02380
location: 521396..522364
location: region:521396-522364:1
so has part: feature:521396-522364:1:exon

WP_013945133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521396-522364:1:exon

TPCCA_RS02385
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02385
old locus tag: TPCCA_0490
so part of: sequence
location: 522361..522549
location: region:522361-522549:1
so has part: feature:522361-522549:1:exon
subclass of: SO_0000010

position:522361:1
position: 522361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522549:1
position: 522549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522361-522549:1:exon

TPCCA_RS02385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02385
old locus tag: TPCCA_0490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881939.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEEERMYSFSGEEIKELALLFRRCGQTLAPALRRLALFVDRTVCRHMTVEEAEDFFGSAER
SIO_010081: TPCCA_RS02385
subclass of: SO_0000673
so part of: TPCCA_RS02385
location: 522361..522549
location: region:522361-522549:1
so has part: feature:522361-522549:1:exon

WP_010881939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522361-522549:1:exon

TPCCA_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: mltG
locus tag: TPCCA_RS02390
old locus tag: TPCCA_0491
so part of: sequence
location: 522709..523611
location: region:522709-523611:1
so has part: feature:522709-523611:1:exon
subclass of: SO_0000010

position:522709:1
position: 522709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523611:1
position: 523611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522709-523611:1:exon

TPCCA_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: mltG
locus tag: TPCCA_RS02390
old locus tag: TPCCA_0491
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342451.1
GO function: GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO process: GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endolytic transglycosylase MltG
translation: MFTVQSGVGARKVIHELRNARLIRSEWAARLYVFARALNFKAGSYAVSPAMSAVRILTMLDDVEQQRFIKVTVPEGLTVKKIAVLLQDATVVSAAAFVEACTSAALRTRYKIPAPSVEGFLYPDTYFFSYQERAANVVGTMIENFLAKTSQLPSFPGDPVARFKTVILASIVEREYRVASEAARIAGVFYNRMKVNMGLQSCATVEYVITEIEGKAHPERLFFKDLEIDSPFNTYKCAGLPPAPISNPGLTALNAALHPEVHDFFYFRLTDPQAGTHTFTKTLDEHDQAGLMLLKKNTGM
SIO_010081: TPCCA_RS02390
subclass of: SO_0000673
so part of: TPCCA_RS02390
location: 522709..523611
location: region:522709-523611:1
so has part: feature:522709-523611:1:exon

WP_245522206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522709-523611:1:exon

TPCCA_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: dnaG
locus tag: TPCCA_RS02395
old locus tag: TPCCA_0492
so part of: sequence
location: 523615..525432
location: region:523615-525432:1
so has part: feature:523615-525432:1:exon
subclass of: SO_0000010

position:523615:1
position: 523615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525432:1
position: 525432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523615-525432:1:exon

TPCCA_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: dnaG
locus tag: TPCCA_RS02395
old locus tag: TPCCA_0492
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881941.1
GO function: GO:0003896 - DNA primase activity [Evidence IEA]
GO process: GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA primase
translation: MARISAHVIDAIADRVDLVSLVGNYTHLERRGDDWWGRCPFHHERTPSFHVVPDKKMYYCFGCGVGGSTIKFFMEIEKIDFHEAAVRLAKRAGIEMSFEDGVHAPSAHASFTMQLCEVYQRIAETFHHVLMHTAQGARARAYLASRKVTDDSIRTFKLGYAPPDPVWLFQFLRHKGYSPEFLARSGLFAKKSERIAVFSDRIMYPIADRYGQVIAFGARALGAAPAKYLNTADMPQYKKGEHLFAFHCALSQMRKTRAALICEGYMDVIAFHQAQLTYAVAPLGALLTKSQARLVRSFVDRIYMCFDADGAGRAATYKAILLCRSLGFEVRIVELNGGTDPAECACIEGEDALRKSVERSTTDAQYLIRCARHEHSHLGADDTSRAVSFLFPYLSVLDSAIQREQVMQDIAMAFGIRIQAVHADYLRYVSRTTQKGTTGNSVLSVQGTAIQVKEPATGVRTAQLRLVLAVVANPELFELLRESVCADDFEDPMAKELFIILEECYRADTRASPHVLSCCTTDELRKLVSEAIVCGEFSCNAPQIVRDGVALVRRNRLLKERESLVGRLRRFGDASSGEECGSMQELMMEKQRVDEELERLKGVRK
SIO_010081: TPCCA_RS02395
subclass of: SO_0000673
so part of: TPCCA_RS02395
location: 523615..525432
location: region:523615-525432:1
so has part: feature:523615-525432:1:exon

WP_013945135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:523615-525432:1:exon

TPCCA_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rpoD
locus tag: TPCCA_RS02400
old locus tag: TPCCA_0493
so part of: sequence
location: 525429..527264
location: region:525429-527264:1
so has part: feature:525429-527264:1:exon
subclass of: SO_0000010

position:525429:1
position: 525429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527264:1
position: 527264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525429-527264:1:exon

TPCCA_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rpoD
locus tag: TPCCA_RS02400
old locus tag: TPCCA_0493
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881942.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoD
translation: MMELSRTPAVMRLLEYAREKKAITHDEVENILAHDGVETEELLHDVLDMLEQENIKVFSSEEEELEDEVFAGLKGPAADDGDGSFPLSTERVRDKLCDSSRGARQNLLSNARNIALDDPVKLYLRDIGQEKLLTAEQEVMLSKRMEEGEGIIKDIITQSGLLLPEFYHIGRSLSKKALAVLDPAESGRTRKEISEEMADRRRLKQAYGEVLRSLYPEMRHYMAMKKRLDERGEPVTVLSSDEEVCKQRDKLLSCLQKVDLQLEEIDRFSRKFLDTARKIREYKRRKDRHEKQLMIADLCDMRKIGRGLAVPRQRAKLEETLGMSADCIQEIYTQIQKVTRRLRRIEYDFENTIDGILSMARAIHRGHVMLKKAKDKLINANLRLVVSIAKKYTNRGLLFFDLVQEGNIGLIKAVEKFEYRKGYKFSTYATWWIRQAITRSISDQARTIRVPVHMIEQINKVTRESRQLLQKFGREPSDEEIAQQLCWTVEKVKQVKSVAREPISLETPIGEEEDSSLGDFVPDADVENPSRVTERVLLKEEVRSILSALPAREHEVLRMRFGLDGDYSQTLEEVGLYFDVTRERIRQIEAKALKRLRHPRHSRRLKDFLDS
SIO_010081: TPCCA_RS02400
subclass of: SO_0000673
so part of: TPCCA_RS02400
location: 525429..527264
location: region:525429-527264:1
so has part: feature:525429-527264:1:exon

WP_013945136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525429-527264:1:exon

TPCCA_RS02405
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02405
old locus tag: TPCCA_0494
so part of: sequence
location: 527274..528095
location: region:527274-528095:1
so has part: feature:527274-528095:1:exon
subclass of: SO_0000010

position:527274:1
position: 527274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528095:1
position: 528095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527274-528095:1:exon

TPCCA_RS02405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02405
old locus tag: TPCCA_0494
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881943.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc ribbon domain-containing protein
translation: MVPANVFENLRALQVVLAQKNRLETEIAEAPKFLVAQEELLTRCKESFIEKNVEYESVREEVARLTTELCKAEKRREDAEVAMDNISTQREYDALDREIQEAKRQEVALRSEVARSDVAYKRLAEEIKLDQEDIVQQERELTENKARVDAEVRGKREQVLRLQEEERRLSPDLDRDVLFKFERIIKSKQGVGIVPVRGNVCAGCHMILPAQFSTGVREGNSIVYCPYCSRILYYEETDEPEMTFFDEEDLGSLSDLVYPEESGGFGGGDREEI
SIO_010081: TPCCA_RS02405
subclass of: SO_0000673
so part of: TPCCA_RS02405
location: 527274..528095
location: region:527274-528095:1
so has part: feature:527274-528095:1:exon

WP_010881943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527274-528095:1:exon

TPCCA_RS05150
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rnpB
locus tag: TPCCA_RS05150
old locus tag: TPCCA_nc0003
so part of: sequence
location: 528116..528458
location: region:528116-528458:1
so has part: feature:528116-528458:1:exon
subclass of: SO_0000011

position:528116:1
position: 528116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528458:1
position: 528458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528116-528458:1:exon

TPCCA_RS05150
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 545776
nc RNA class: RNase_P_RNA
gene: rnpB
locus tag: TPCCA_RS05150
old locus tag: TPCCA_nc0003
product: RNase P RNA component class A
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00010
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TPCCA_RS05150
subclass of: SO_0000673
so part of: TPCCA_RS05150
location: 528116..528458
location: region:528116-528458:1
so has part: feature:528116-528458:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:528116-528458:1:exon

TPCCA_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02410
old locus tag: TPCCA_0496
so part of: sequence
location: 528539..529414
location: region:528539-529414:1
so has part: feature:528539-529414:1:exon
subclass of: SO_0000010

position:528539:1
position: 528539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529414:1
position: 529414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528539-529414:1:exon

TPCCA_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02410
old locus tag: TPCCA_0496
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010697056.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MFLFSVFFALVVGVGVGAWRYRRYYRGLPSARSVYEDWKNGNYKAVYDKATEILQRRVLDAEMLALHGFAAYYIFSEQTDLSVSYDYLNSAIVSLRRALHVVRPAEVPNVSYVLGKAYYQRGYYYADLAVKYLDLAYNTGFRAADLAEFRGMSASLLGDMQKAVESFTQALAAQPSDLVLYALAECYEKLSDFSKAKLYLYDTIGKTKDILLELKCRNRLAALYLSERNLAEAERELDVVLQKDERSAEAHYHRGVLYEMGSDLVRARAEWRRALRLNPLHEPTRVKLNLK
SIO_010081: TPCCA_RS02410
subclass of: SO_0000673
so part of: TPCCA_RS02410
location: 528539..529414
location: region:528539-529414:1
so has part: feature:528539-529414:1:exon

WP_083815502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528539-529414:1:exon

TPCCA_RS02415
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02415
old locus tag: TPCCA_0497
so part of: sequence
location: 529427..530461
location: region:529427-530461:1
so has part: feature:529427-530461:1:exon
subclass of: SO_0000010

position:529427:1
position: 529427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530461:1
position: 530461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529427-530461:1:exon

TPCCA_RS02415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02415
old locus tag: TPCCA_0497
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945138.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein
translation: MFFFRRFSADVGIDLGTCNTIIYVEGRGIVVNEPSVVAVERGTKSVVAVGSDAKRMLWKTPGNIVAIRPLKDGVIADMDTTEKMIRYFISKILPRHRLIKPRMVIGIPSCITDVECRAVHESASKAGAGEVEVLEESLAAAIGANIPIEEPAGNMVCDIGGGTTEVSVISLLGMVVTNAIRVGGDEFDQAIIKHVRSVHNLIIGEQTAERLKIEIGNASPEKNIEKVEVKGTDAITGLPRRLEIDSVEVREALKEPITQIVEEIKRTLAQTPPELAADIVERGIVMTGGGSLLKGLPKLISKETHVPVILAENPMNCVAIGAGRYHEVYKDISGDRSLYAGLNS
SIO_010081: TPCCA_RS02415
subclass of: SO_0000673
so part of: TPCCA_RS02415
location: 529427..530461
location: region:529427-530461:1
so has part: feature:529427-530461:1:exon

WP_013945138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529427-530461:1:exon

TPCCA_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: mreC
locus tag: TPCCA_RS02420
old locus tag: TPCCA_0498
so part of: sequence
location: 530466..531329
location: region:530466-531329:1
so has part: feature:530466-531329:1:exon
subclass of: SO_0000010

position:530466:1
position: 530466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531329:1
position: 531329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530466-531329:1:exon

TPCCA_RS02420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: mreC
locus tag: TPCCA_RS02420
old locus tag: TPCCA_0498
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945139.1
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreC
translation: MEKAFFFRIDSDLFTFIVFLLVSSGLLVFSGGELIVSFRDVGFSVTSRVEKAAASVSFFVTHTVKTLKTLSEVQRRYEVLREQLKDYEFLQGSRESLRKENQRLRAMLGFSRELSTRNIPAEIIGFDPDNLYSGIVVSRGARHGVRKNMPVVAFQSDTLGLVGKVVQVSRTTSMIVPLYHYQFYVAGKLERAQYRGLISGQGGSDFPLLMRYVKKHGQGSIRVGDLVVTSGENYPFPKDVPVGKVRDIKLHDHETSLELSLDPVLDLSRLEYVFILDLSLSQEGPHG
SIO_010081: TPCCA_RS02420
subclass of: SO_0000673
so part of: TPCCA_RS02420
location: 530466..531329
location: region:530466-531329:1
so has part: feature:530466-531329:1:exon

WP_013945139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:530466-531329:1:exon

TPCCA_RS02425
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: mreD
locus tag: TPCCA_RS02425
old locus tag: TPCCA_0499
so part of: sequence
location: 531326..531832
location: region:531326-531832:1
so has part: feature:531326-531832:1:exon
subclass of: SO_0000010

position:531326:1
position: 531326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531832:1
position: 531832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531326-531832:1:exon

TPCCA_RS02425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: mreD
locus tag: TPCCA_RS02425
old locus tag: TPCCA_0499
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881948.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreD
translation: MIRLIAWSVGTSFLFSIVEMAVFVHVSYLSIMPDLVLLVVLFTSIHNGVVAGIWTGFIAGIIFDFLSISPFGLHSFVFTTIGFMVGKVQGRYHIDRVFAPAILAGFAMIFKVGLVLVLRGVFGPNIQVYSVFSRQLWIEMTLNIVFVPFVFGLLNMFPTTFLYKRFSS
SIO_010081: TPCCA_RS02425
subclass of: SO_0000673
so part of: TPCCA_RS02425
location: 531326..531832
location: region:531326-531832:1
so has part: feature:531326-531832:1:exon

WP_013945140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531326-531832:1:exon

TPCCA_RS02430
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: mrdA
locus tag: TPCCA_RS02430
old locus tag: TPCCA_0500
so part of: sequence
location: 531833..533707
location: region:531833-533707:1
so has part: feature:531833-533707:1:exon
subclass of: SO_0000010

position:531833:1
position: 531833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533707:1
position: 533707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531833-533707:1:exon

TPCCA_RS02430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: mrdA
locus tag: TPCCA_RS02430
old locus tag: TPCCA_0500
EC number: 3.4.16.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881949.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-binding protein 2
translation: MRYFSLLPDRHMLFRIKVFTWLVVLVMLLYMRQLFVIQIVRGDSFKKKSLNISQRSKVIPAQRGEIFDRHADLPMVLNVNSFAVDMIPGEVPPEQFDTVLNKLSHILRVPISDIRKKIPDAVRRSFQTVELRSNVSYEDITAIAQIIDELPGVSWYSKPVRNYVETGSFAHVIGYVGEITKEELKRFYSKGYRPNSLIGKAGIEKEYDEVLRGKEGHEYRTVDARGRYIENTSVTNPPRMGNNLVLTIDRRIQKLAEDALGPRIGAAVVLKPTTGEVLAMVSYPYFDQNIFTQHNAHELYAQLSHDTRFPLLNRVVNASYPPASTFKIVMSTAILAEKAFPHEKTVDCPGEIEYGNRLFRCHIRKPGHGKVDLRRALEQSCDIYYWTVCRDYLGIDRMISYINDFGFGKSARIDLPSQTEGMVPTPKWKERRFHEKWLDGDTMNLAIGQGYMLVSPLQVANMVAMTVNNGVIYRPHLLKEIQDSRTNEVLFRHKPEVLKTAKIPAEIFEHVRADMHSVVTRGSSQYAMKNKTVSLAGKTGTAEVGFHNRWHSWMAAYGPYDRPPDEAVVVVVLVEARNEWEWWAPFATNIIFQGIFANEDYEQAVESLKSYGISLGVPARSRQE
SIO_010081: TPCCA_RS02430
subclass of: SO_0000673
so part of: TPCCA_RS02430
location: 531833..533707
location: region:531833-533707:1
so has part: feature:531833-533707:1:exon

WP_013945141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531833-533707:1:exon

TPCCA_RS02435
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: rodA
locus tag: TPCCA_RS02435
old locus tag: TPCCA_0501
so part of: sequence
location: 533704..535005
location: region:533704-535005:1
so has part: feature:533704-535005:1:exon
subclass of: SO_0000010

position:533704:1
position: 533704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535005:1
position: 535005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533704-535005:1:exon

TPCCA_RS02435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: rodA
locus tag: TPCCA_RS02435
old locus tag: TPCCA_0501
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945142.1
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein RodA
translation: MRIRGVSDFDYLLLLTMLALTSIGILFIYSSGVNSEGHVISREYLKQIVWAVMGVVLMLSVSMYDYHRFKDRTTLIFAGFILLLIYTRLFGRYVNGAKSWIGVGEFGIQISEFAKIAYILYLAHYLVYSQSEPMLKRFAKAGVITLLPMALILSQPDLGTASVYLPIFLVMCFIAGFPLRLIFAVVCVVLLTLLFTLLPLWEQTFLQYQGVATRIADSRMLSLFVFFSLSATSAVAVVGYLLSGRKYYYWITYALGMVSISYGASLLGVRVLKPYQMMRLIIFLNPEVDPLKAGWHIIQSMIAIGSGGAFGMGYLRGPQSHYRFLPQQSTDFIFSILSEEWGFVGGVIVFGLYLLFFLHTLSIMGHVDDLYGKLIASGVLGMFLFHFVVNVGMTMGIMPITGIPLLLLSYGGSSLWTAMIATGLLMSINARQL
SIO_010081: TPCCA_RS02435
subclass of: SO_0000673
so part of: TPCCA_RS02435
location: 533704..535005
location: region:533704-535005:1
so has part: feature:533704-535005:1:exon

WP_013945142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:533704-535005:1:exon

TPCCA_RS02440
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02440
old locus tag: TPCCA_0502
so part of: sequence
location: 535031..535927
location: region:535031-535927:1
so has part: feature:535031-535927:1:exon
subclass of: SO_0000010

position:535031:1
position: 535031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535927:1
position: 535927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535031-535927:1:exon

TPCCA_RS02440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02440
old locus tag: TPCCA_0502
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881951.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MKVVLFYDQGRAHSVAAICEVLCAQGCAVTPHAIEQVWNDTSPCSTPLALVQDATHVFFLYAHEPMRDPAFIFFSGVACGRGMHVLLLATTTEVRDIHVFRDLVFLLEEETFEDFFRVEHERFVRQKKKRVARTALLERGYPCFEENFIATVVDGNIDIVNLFLDAGFSAALKDARGTPVLSLAVREGQDEMAAQLIARGAPVDQLSDDRAYSALMEAAQIGNRTVARLLLHAGADPNVRGSNGQTALVLAVGRKDHVLIRLLMDHGANPYLEDKLGLSAQGYAKLFNDPTLCTLVGV
SIO_010081: TPCCA_RS02440
subclass of: SO_0000673
so part of: TPCCA_RS02440
location: 535031..535927
location: region:535031-535927:1
so has part: feature:535031-535927:1:exon

WP_013945143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535031-535927:1:exon

TPCCA_RS02445
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02445
old locus tag: TPCCA_0503
so part of: sequence
location: 535906..536469
location: region:535906-536469:1
so has part: feature:535906-536469:1:exon
subclass of: SO_0000010

position:535906:1
position: 535906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536469:1
position: 536469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535906-536469:1:exon

TPCCA_RS02445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02445
old locus tag: TPCCA_0503
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881952.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYAGGRVVRSAFARGKVCYLIGSVLWGSVSCTQPRVQKWVQNDGKVNVHSPQERAGVVATFGTVRITRSDYERTKAELQDVVAHLNRITAERDYHKWLVHLSDAYRRTYSMPDILQQSSDALPKKGVRLRHLRDYFIHVFVPSRQNVRVDSIVFESPTRVDVIMNHGGKALLVYKIEKIHSAWKLLP
SIO_010081: TPCCA_RS02445
subclass of: SO_0000673
so part of: TPCCA_RS02445
location: 535906..536469
location: region:535906-536469:1
so has part: feature:535906-536469:1:exon

WP_013945144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535906-536469:1:exon

TPCCA_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02450
old locus tag: TPCCA_0505
so part of: sequence
location: complement(536600..537934)
location: region:536600-537934:-1
so has part: feature:536600-537934:-1:exon
subclass of: SO_0000010

position:536600:-1
position: 536600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537934:-1
position: 537934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536600-537934:-1:exon

TPCCA_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02450
old locus tag: TPCCA_0505
EC number: 2.7.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881954.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hexokinase
translation: MDQHTRTRDLVSAFFGRFHFDVQGPSVRTVVDVLRADMVRGLEEEAQLPPRMGSALAMIPTWVAPPRVSPCNRRVIVIDAGGTNFRSCLVRFGDSGTPHIENLEKRPMPGTTREYSRTEFFGEIADNLARLKGAADCIGFCFSYPIRIRPDGDGEVIQFAKEIKAAEVIGTCVGAALTEALSARNWPELRSLKMLNDATSALLAGFFAAPEGCSFSSYVGFILGTGMNSAYLEPDPIPKIPAHHTPQVVVCESGKSNKVPRSVFDELFTQTTAEPDIAHLEKMSSGTYLGPLASVVVRLAAQEGLFSHAVHAALSTVSFTLVDMDRFLFAPSVSTTTLGALLAPGTDTDREILFLLLDAVVARAARIAAGVIAASVLKSGAGYDPLRPVCVLAEGTTFQRTYRLRTRVTSHLQAFLTEERGVYFDIISLENAVTLGSALGGLSS
SIO_010081: TPCCA_RS02450
subclass of: SO_0000673
so part of: TPCCA_RS02450
location: complement(536600..537934)
location: region:536600-537934:-1
so has part: feature:536600-537934:-1:exon

WP_013945145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536600-537934:-1:exon

TPCCA_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02455
old locus tag: TPCCA_t0021
so part of: sequence
location: 538294..538366
location: region:538294-538366:1
so has part: feature:538294-538366:1:exon
subclass of: SO_0000663

position:538294:1
position: 538294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538366:1
position: 538366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538294-538366:1:exon

TPCCA_RS02455
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS02455
old locus tag: TPCCA_t0021
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:538327..538329,aa:Lys,seq:ctt)
SIO_010081: TPCCA_RS02455
subclass of: SO_0000673
so part of: TPCCA_RS02455
location: 538294..538366
location: region:538294-538366:1
so has part: feature:538294-538366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:538294-538366:1:exon

TPCCA_RS02460
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02460
old locus tag: TPCCA_t0022
so part of: sequence
location: 538426..538506
location: region:538426-538506:1
so has part: feature:538426-538506:1:exon
subclass of: SO_0000663

position:538426:1
position: 538426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538506:1
position: 538506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538426-538506:1:exon

TPCCA_RS02460
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS02460
old locus tag: TPCCA_t0022
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:538460..538462,aa:Leu,seq:tag)
SIO_010081: TPCCA_RS02460
subclass of: SO_0000673
so part of: TPCCA_RS02460
location: 538426..538506
location: region:538426-538506:1
so has part: feature:538426-538506:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:538426-538506:1:exon

TPCCA_RS02465
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02465
old locus tag: TPCCA_t0023
so part of: sequence
location: 538517..538588
location: region:538517-538588:1
so has part: feature:538517-538588:1:exon
subclass of: SO_0000663

position:538517:1
position: 538517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538588:1
position: 538588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538517-538588:1:exon

TPCCA_RS02465
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS02465
old locus tag: TPCCA_t0023
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:538549..538551,aa:Gly,seq:gcc)
SIO_010081: TPCCA_RS02465
subclass of: SO_0000673
so part of: TPCCA_RS02465
location: 538517..538588
location: region:538517-538588:1
so has part: feature:538517-538588:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:538517-538588:1:exon

TPCCA_RS02470
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: tig
locus tag: TPCCA_RS02470
old locus tag: TPCCA_0506
so part of: sequence
location: 538669..539997
location: region:538669-539997:1
so has part: feature:538669-539997:1:exon
subclass of: SO_0000010

position:538669:1
position: 538669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539997:1
position: 539997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538669-539997:1:exon

TPCCA_RS02470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: tig
locus tag: TPCCA_RS02470
old locus tag: TPCCA_0506
EC number: 5.2.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881955.1
GO component: GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trigger factor
translation: MELQKKFTALAQSQVELEVVVAREDAQRHYQRFVEEYLERARLPGFRKGKVPLAVLERKYGSAIRQDAAASLMEKALEEGFAQASQDSQPLPISRPSLKKKPVFDPDEDFSFAVIYDVFPSVELRNTSGFSLSVPTVSVTEEDVSRELTRIQERNALVTDKGADSCAEVGDIATVDYHEVDDSGAVRPGTERAGVVFTLGVEEGPFALGQDILGMKLGQRCLFAKRAGMLKDEAAQVRVTLKALKQRQLPSLDDELAQDVSDAFRTLDDLTRSVRQNLAEALEAALHEYKRRQLLRILVRENPFSLPESLVVGEMESRWALVMRQFGVSLSGTPQNKLQFFQQWRPEVEEHLKQRVIVELLLKQEQVSVSAEEIETEYVRIASKTGSKEERVREYYAGEEKQRALCEGIRERKLCQKLLGRCVTECGPEQSLTDFLQEQSRA
SIO_010081: TPCCA_RS02470
subclass of: SO_0000673
so part of: TPCCA_RS02470
location: 538669..539997
location: region:538669-539997:1
so has part: feature:538669-539997:1:exon

WP_013945146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538669-539997:1:exon

TPCCA_RS02475
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02475
old locus tag: TPCCA_0507
so part of: sequence
location: 539990..540601
location: region:539990-540601:1
so has part: feature:539990-540601:1:exon
subclass of: SO_0000010

position:539990:1
position: 539990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540601:1
position: 540601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539990-540601:1:exon

TPCCA_RS02475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02475
old locus tag: TPCCA_0507
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945147.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp protease proteolytic subunit
translation: MRERMYNLVPYVIEQSGGGERSYDIFSRLLKDRIIFVDGEITDAVADLVVAQLLFLESQNPDKDISLYINSPGGAVTAGLAVYDTMQHICPEVQTICLGQASSMAAVLLAGGAPGKRFALPSSRVMIHQPWGGVQGQASDVCIQAQEILRLKTLTIAYFALHTGQSEEQVREDMERDFFLSAEQACSYGIVDTVMKRRKHAQV
SIO_010081: TPCCA_RS02475
subclass of: SO_0000673
so part of: TPCCA_RS02475
location: 539990..540601
location: region:539990-540601:1
so has part: feature:539990-540601:1:exon

WP_013945147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539990-540601:1:exon

TPCCA_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: clpX
locus tag: TPCCA_RS02480
old locus tag: TPCCA_0508
so part of: sequence
location: 540588..541835
location: region:540588-541835:1
so has part: feature:540588-541835:1:exon
subclass of: SO_0000010

position:540588:1
position: 540588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541835:1
position: 541835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540588-541835:1:exon

TPCCA_RS02480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: clpX
locus tag: TPCCA_RS02480
old locus tag: TPCCA_0508
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881957.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp protease ATP-binding subunit ClpX
translation: MLRSKGDLVLDCSFCGKKEDERRRIVTGHGVSICNYCVERCAEYLRDRKPSALALMTKEEIPTPLELKAYLDQYVIGQDLAKRVLSVAVYNHYKRVAGRSLDIDSVLIEKSNVLLIGPTGSGKTLLAKTLSQKMKVPFAIADATTLTEAGYVGEDVENILLKLVQNANGDVALAERGIIFIDEIDKISRKSENVSITRDVSGEGVQQALLKIIEGTIASVPPQGGRKHPNQDMLRVDTSNILFICGGAFVGLDGIVGTRVCKNPVGFGADVKTVKERGLQLMHEDVIPDDLVKFGLIPEIIGRLPVTVALDALSKEDLRNILVRPRNAIVRQFEALFALDDVRLVFDEDALDAIAQQAIDQKTGARGLRSIVERLMLDAMFEAPSLKGKKELCITKKVVTQEEKASVRLVSERTA
SIO_010081: TPCCA_RS02480
subclass of: SO_0000673
so part of: TPCCA_RS02480
location: 540588..541835
location: region:540588-541835:1
so has part: feature:540588-541835:1:exon

WP_013945148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540588-541835:1:exon

TPCCA_RS02485
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02485
old locus tag: TPCCA_0509
so part of: sequence
location: 541932..542498
location: region:541932-542498:1
so has part: feature:541932-542498:1:exon
subclass of: SO_0000010

position:541932:1
position: 541932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542498:1
position: 542498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541932-542498:1:exon

TPCCA_RS02485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02485
old locus tag: TPCCA_0509
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881958.1
GO function: GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: redoxin domain-containing protein
translation: MESLIGKRVIDFKLPAYVGGKFTEVSNASIKGSWAVFMFYPADFTFVCPTELADLARVYPSFVEIGCKVYSVSTDSEYVHKAWADATDTIKNLPYEMISDKAGKLAGFFGVLLPDTWHALRGTFVVDPEGLVKAFEVHDMGIGRDADELLRKVQSAQFVAKHGDQVCPARWKPGAKTLKPGIDLIGKI
SIO_010081: TPCCA_RS02485
subclass of: SO_0000673
so part of: TPCCA_RS02485
location: 541932..542498
location: region:541932-542498:1
so has part: feature:541932-542498:1:exon

WP_010881958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541932-542498:1:exon

TPCCA_RS02490
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: lepA
locus tag: TPCCA_RS02490
old locus tag: TPCCA_0510
so part of: sequence
location: complement(542679..544496)
location: region:542679-544496:-1
so has part: feature:542679-544496:-1:exon
subclass of: SO_0000010

position:542679:-1
position: 542679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544496:-1
position: 544496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542679-544496:-1:exon

TPCCA_RS02490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: lepA
locus tag: TPCCA_RS02490
old locus tag: TPCCA_0510
EC number: 3.6.5.n1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881959.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation elongation factor 4
translation: MRAMACVRRVRNFCIVAHIDHGKSTLADRLIERTRAVEERLQRAQMTDNMELERERGITIKSHAVCIPYTDAHGTEYVLNFVDTPGHADFAYEVSRAIAACEGALLVVDATQGVESQTISNLYLVLEHDLEIIPVINKIDLPTADVPRVLQQVEHDLGLDPASSVLISAKTGENVDALFDAIITRIPPPRGRNTTALQALVFDCHYDQYRGVVVHIRVFEGQVTSGMVIRFMSNGAEYRVEETGVFVFNLIAREALCAGDVGYLSANVKTVSDVQVGDTITDASCPCDTPRAGFRRVKPVVFSSVYPVDTDECEQLREALERLALNDASISWERDSSLALGHGFRCGFLGLLHLEVVQQRLEREFNQTVIFTAPQVQYYVFLKTGQRIVCDNPAHYPLEQEIAQVHEPYIRATIITSTEVLGAVMTLCIEKRAYQTAVNYLDQKRVELVYEMPLAEILFGFYDRLKSTSHGYASFDYELIESKLTDLVKVDILINGKPVDALAQLCYRPHARRRAQAVCARLKEEISRQQFKIAIQGSIGGRIISRETVSPFRKDVLAKCYGGDITRKRKLLEKQKEGKKRMKMVGDVEIPQAAFLSVLKEASDA
SIO_010081: TPCCA_RS02490
subclass of: SO_0000673
so part of: TPCCA_RS02490
location: complement(542679..544496)
location: region:542679-544496:-1
so has part: feature:542679-544496:-1:exon

WP_013945149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542679-544496:-1:exon

TPCCA_RS02495
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02495
old locus tag: TPCCA_0511
so part of: sequence
location: 544625..545164
location: region:544625-545164:1
so has part: feature:544625-545164:1:exon
subclass of: SO_0000010

position:544625:1
position: 544625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545164:1
position: 545164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544625-545164:1:exon

TPCCA_RS02495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02495
old locus tag: TPCCA_0511
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016522419.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CarD family transcriptional regulator
translation: MGKACAFRPHDHVVYPGQGVGQVQEISEKTFKNETLLYYVIYLEESDMTVLIPVDKAQELGIRTIVKRKEAERALRFLSEDFDPSPLDWKMRYQVNLNLFKSGGILDNAAVVRSLYHRSKVKELPIQERKLYDSAYRIFQDEMCFALGLRPPEVETLIHGYLEKAKENPVVSGMVDVPG
SIO_010081: TPCCA_RS02495
subclass of: SO_0000673
so part of: TPCCA_RS02495
location: 544625..545164
location: region:544625-545164:1
so has part: feature:544625-545164:1:exon

WP_013945150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544625-545164:1:exon

TPCCA_RS02500
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: ispF
locus tag: TPCCA_RS02500
old locus tag: TPCCA_0512
so part of: sequence
location: 545161..546408
location: region:545161-546408:1
so has part: feature:545161-546408:1:exon
subclass of: SO_0000010

position:545161:1
position: 545161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546408:1
position: 546408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545161-546408:1:exon

TPCCA_RS02500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: ispF
locus tag: TPCCA_RS02500
old locus tag: TPCCA_0512
EC number: 4.6.1.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945151.1
GO function: GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
GO process: GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
translation: MTRAALLVPAAGSSARMRRGGACVQKKEYLPLTSRQPGVCLLSEILVRALEARSFFLVVVTVPAGEVAYAESQVACDSRLSAFPSRTRPVILYVPGAHTRSASVRAGLDAMATHAPDVVLVHDGARPFVSVALIHSVLEATCRYGAAVPVIEATDTPKGVAADGSIETHLIRSRVRLAQTPQGFCYASLCAAHHRAATDGEQYTDDSELYARYGGTVHVCAGERSNVKITYPEDLEQRASEPALTRGISVLPCTEEGALRVGLGTDMHALCAGRPLILAGIHIPSEKGAQGHSDADVLAHASIDALLGAAGLGDIGTFFPSCDGRWKDAHSCALLRHTWQLVRAACWQLVNLDAVVCLEQPALHPFREAMRASLAQALDTHVTRVFVKAKTAERLGPVGSGAAVTAQVVVLLKKI
SIO_010081: TPCCA_RS02500
subclass of: SO_0000673
so part of: TPCCA_RS02500
location: 545161..546408
location: region:545161-546408:1
so has part: feature:545161-546408:1:exon

WP_013945151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:545161-546408:1:exon

TPCCA_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: trkA
locus tag: TPCCA_RS02505
old locus tag: TPCCA_0513
so part of: sequence
location: 546446..547882
location: region:546446-547882:1
so has part: feature:546446-547882:1:exon
subclass of: SO_0000010

position:546446:1
position: 546446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547882:1
position: 547882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546446-547882:1:exon

TPCCA_RS02505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: trkA
locus tag: TPCCA_RS02505
old locus tag: TPCCA_0513
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505524.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Trk system potassium transporter TrkA
translation: MQKNFVLLWPSDMKVIVVGCGTNGRELTRRLSARGHQVTLVAAAHEPVPRKIPAGAQTLVRHQKDHRATLGEAGIAKAQAFVAVTEVDELNIVLCGIAADLNAGVIKIAQTHDDHYAHAVCRESRCIFGIDFLISADKEAMRAVVSTVEQGAISDVIPLKNAPYEIARFPIAKGSGLDGITLSDMRRLVKISFVAVAFEVRGRSVIPSGETMLASGMRLSVLCAPEHVGRFYELAGFKIHPVKKIALIGMSAVGTLVAQDVAEKCKPHFFSSAFSLSPRERASLVLVDKSETATQAVCAQFPHVTAYHGDVTDEAFFAEITPDTFDLVITTTNNYELNMITAAYMKTLGVPRAVALVHSSLMEDIAGKIGIDVAVSYQDVVVDAIMSHLAGSHVTGIHTIGDGSLEIVEFAISAQSPLVGKRLKDIAVHGSFLVLLISTVRGSFIPSGDTVLLEGSVLMFIVQSAQSGKIVALLGGTV
SIO_010081: TPCCA_RS02505
subclass of: SO_0000673
so part of: TPCCA_RS02505
location: 546446..547882
location: region:546446-547882:1
so has part: feature:546446-547882:1:exon

WP_245522208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546446-547882:1:exon

TPCCA_RS02510
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: uvrA
locus tag: TPCCA_RS02510
old locus tag: TPCCA_0514
so part of: sequence
location: 547996..550878
location: region:547996-550878:1
so has part: feature:547996-550878:1:exon
subclass of: SO_0000010

position:547996:1
position: 547996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550878:1
position: 550878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547996-550878:1:exon

TPCCA_RS02510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: uvrA
locus tag: TPCCA_RS02510
old locus tag: TPCCA_0514
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945153.1
GO component: GO:0009380 - excinuclease repair complex [Evidence IEA]
GO function: GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO process: GO:0006289 - nucleotide-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excinuclease ABC subunit UvrA
translation: MGSAARNLCIKGAREHNLKNIDVTLPRDALVVISGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGRLDKPDVDSIEGLSPAIAIEQKTTQRNPRSTVGTVTEIYDYYRLLFARIGRAHCPHCAREIKEQTVDQIVDTLMTVPSGSRIQLLAPVVRGKKGTHHKVLEAARKDGFVRARIDGALLHLHERISLDKQKKHSIDIVVDRIQLSDTVRKRLTESVETTLGYADGLLTVLVQGENSGTVSGKIETSSLLPSELFFSQKNACAHCNVSVPELQPRLFSFNAPFGACPSCAGLGIMQTFDLDRIVPDQNRSFNEGAFLPFKPEHEWNRVRFAALAEKYHFSLDDPVRNLSKHALDIILHGSGSEALEFSHERKDGSRTARYIKPWPGIFSELHRRYAESCTHSQREVYERYLSVRTCEACRGMRLKPESLAVTIEKKNIHALSALSVDDSCEFFKTLHLTEVEATIAQQILKEITDRLEFLQNVGLGYLTLERAAATLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNERLIQTLLHLRDLGNTVLVVEHDEQTLRVADYIVDLGPGAGVHGGYVVAAGSPPEVMQVQASLTGQYLAGAITLPIPAVRRTGNGNVLTVHDVHEHNLQHISVRIRLGTFTCITGVSGSGKSTLLIDVLYPALYNRVMNGRLPEGKFSSIEGTEHLDKVIYVDQSPIGRTPRSNPATYVGVFTDIRMLFSQVPEAKMRGYKPGRFSFNVPGGRCEHCKGDGVITIEMNFLPDVYITCDVCHGTRFNRETLAVFYKGKNISHVLDMTIEEARSFFSAVPPIVRKLEALCSVGLGYVRLGQSALTLSGGEAQRVKLALELSKRATGKTLYIFDEPTTGLHFADIIQLMEVVQRLVDQGNTVVMIEHNMDVIVQADCVIDLGPEGGMHGGTIVAQGSPEAVSQIAESRTGWYIKEVLCKKT
SIO_010081: TPCCA_RS02510
subclass of: SO_0000673
so part of: TPCCA_RS02510
location: 547996..550878
location: region:547996-550878:1
so has part: feature:547996-550878:1:exon

WP_013945153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547996-550878:1:exon

TPCCA_RS02515
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02515
old locus tag: TPCCA_0515
so part of: sequence
location: 550875..553856
location: region:550875-553856:1
so has part: feature:550875-553856:1:exon
subclass of: SO_0000010

position:550875:1
position: 550875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553856:1
position: 553856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550875-553856:1:exon

TPCCA_RS02515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02515
old locus tag: TPCCA_0515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015026171.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS-assembly protein LptD
translation: MRAWYPIWGIFFLFCPLFGESGLRKLRIIINSAQETTRLSETGQPILESTGRVPLSPFDLQDQLVVFTGNVSISIDDGSVTATILSDQTVYNTSAQILYSTGNVRYSRTEGETKTIEISGTRFIFELKTLKGLFLDGSLTLPIKGQQVLFVQSPIIHSDAYTSVILKQATLSTEEDPEQALWSVHTKNIWLLPNNQLAFSHGVLSFGVVPLLYIPFFYYPKDEFIGNPVFGLRSRAGAFIQTTTYLLGKRPKSAYPPSFGTQSPAQEEAPNYLKISADYYSALGGMAGISTFFQAKDYLPFVRFSAYIGASRTVHQGSNGAYSIYDTTGQVMWDKSYLFGMQVPFRYYAECALRFHKTPLYVDVHVPIISDPFFSTDFLQRSEDLNWFHLALSPRSLRELTQSTISSYDWKISASLRPVWLVLHPWLRDFSLDPLSFTVHFNSKFDSQKKNSSPEHNFFYPHSMESRAGLSFSGTLFSHVWERQKSQQEESYAPKEIRNPLAYSPADGLSRESSPPEQSPAVSKENSETDSTFDFFMPEFHEESERRTGTDRAYVFTRYALDYKGKGDIVYDAQFNHSSWDNASKIKWNDLQSQRVTMRGDFSIRSQFQCVNDIIRMSNGIQCTLQHRHPIHGQPPATQNGFQNSALVQSSNNLAVYPFSADSFFRESFLGWSITPVLYDSSPPTGKSSLHVRDHSITANAAFSLYGYTQQIRVSVHFAPGPYAYSIATFLSFPYISATLSARFLDKPQVRAELDFRMPYEITCKQAYVYDIEKGMSDSYEVSLGWKYFSLSYLLKGESGSVSTVPAVNNGLSISKLKLTLSHDDFPLTVRFWKRRIKIQGTLSSSLEINFKDLDKSHISFSPLITFSIYKFLDLSINTVIKNEKLTPYFSTQSSKSPQTGLWNAFVSSLYFWDETKRSSALFPIRTLNIELAHYLKDWTLRFGYRLHSEPFSSGSQQIPSLVSSISLSINWNPLPVVRTRARKTPGMFEVGI
SIO_010081: TPCCA_RS02515
subclass of: SO_0000673
so part of: TPCCA_RS02515
location: 550875..553856
location: region:550875-553856:1
so has part: feature:550875-553856:1:exon

WP_013945154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:550875-553856:1:exon

TPCCA_RS02520
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: murJ
locus tag: TPCCA_RS02520
old locus tag: TPCCA_0516
so part of: sequence
location: complement(553870..555450)
location: region:553870-555450:-1
so has part: feature:553870-555450:-1:exon
subclass of: SO_0000010

position:553870:-1
position: 553870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555450:-1
position: 555450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553870-555450:-1:exon

TPCCA_RS02520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: murJ
locus tag: TPCCA_RS02520
old locus tag: TPCCA_0516
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945155.1
GO process: GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: murein biosynthesis integral membrane protein MurJ
translation: MKSKSSLLKSGLLLSLLTLVSRVLGLAREVVKSTLMGTSATADAFTVAFMIPNLFRRLFAENAISVAFIPVFTQHYSMPSSAQVPCSSKTKEFLSAIFTLMSSVTASISLIGILGAPYIVRLFDTDQSLTVSLTRLMFPYLWMISLAAFFQGMLHSIKVFVPSGCTPIFFNVSVIFSMYFLNVSHMNVAIAAAIGVLIGGCAQALFQLVFVYMHGFRFTLQSPLKAMHNEGVRRIIALLLPTTVGIATYLLNDLVCTALATSVEIGVAASLQYSLRIQELLLGIFIISLSSVVLPDLSFHVMRKDWQSFENLLITAIKIVMLITIPATFFVLFSSDRIITLVYKNAIFNELSVRMTATIFRWHSVGMLAIALNRVLISAFYAQHNSFAPMIAGTISFVTNIILATLLFIPLGGKGIAFSLSAASMVQTVFLWIFLKRSWQITTPSLYETSLYYGVKITLFSVIALVPTWASSFFTAYFFPGSHKIISHGAPLCVEALIFSCTGCILLLLSRDEFAYTALRSIRFCR
SIO_010081: TPCCA_RS02520
subclass of: SO_0000673
so part of: TPCCA_RS02520
location: complement(553870..555450)
location: region:553870-555450:-1
so has part: feature:553870-555450:-1:exon

WP_013945155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:553870-555450:-1:exon

TPCCA_RS02525
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: ruvC
locus tag: TPCCA_RS02525
old locus tag: TPCCA_0517
so part of: sequence
location: complement(555447..556037)
location: region:555447-556037:-1
so has part: feature:555447-556037:-1:exon
subclass of: SO_0000010

position:555447:-1
position: 555447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556037:-1
position: 556037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555447-556037:-1:exon

TPCCA_RS02525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: ruvC
locus tag: TPCCA_RS02525
old locus tag: TPCCA_0517
EC number: 3.1.21.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945156.1
GO function: GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: crossover junction endodeoxyribonuclease RuvC
translation: MHAQNVDIAPGSTSTVSIIVGVDPGLESTGYGVIEAGGGSLRCLTYGVIVTQSNQPSAARLRHIFDTLQQVISIYQPQYCAVETIYFAKNVTSALCVAQARGVVLLAMAQQHISVAEYAPNAIKKAITGIAQAEKRQVQHLVKILLNLKDIPHPDHAADALAVAVTHVHCCMSSNYAVGSTRSRGAYVTLYKKGKR
SIO_010081: TPCCA_RS02525
subclass of: SO_0000673
so part of: TPCCA_RS02525
location: complement(555447..556037)
location: region:555447-556037:-1
so has part: feature:555447-556037:-1:exon

WP_013945156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:555447-556037:-1:exon

TPCCA_RS02530
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02530
old locus tag: TPCCA_0518
so part of: sequence
location: complement(556019..556711)
location: region:556019-556711:-1
so has part: feature:556019-556711:-1:exon
subclass of: SO_0000010

position:556019:-1
position: 556019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556711:-1
position: 556711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556019-556711:-1:exon

TPCCA_RS02530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02530
old locus tag: TPCCA_0518
EC number: 2.7.6.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881967.1
GO function: GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO process: GO:0006772 - thiamine metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine diphosphokinase
translation: MKRALIITGGEYAPYEFVQYYLPAYDLLIAADSGLDTALQFGLVPDFVIGDMDSVKDNLFIQACDKTRTHLFPRDKDFTDTELAVTLAHQLGSDDLSIVGGGGGRADHFLYFMRLFAAPLSPRLWLYRHGLGYCFGEGCVTQQLCIGGVDNTSFSFFPVGDATDYSLSSEGLHWPLDGVPWHTHVSMSNRSSAPVVRVEAHRGRFLLFLSPLGRYTIDHHERGIACTHRT
SIO_010081: TPCCA_RS02530
subclass of: SO_0000673
so part of: TPCCA_RS02530
location: complement(556019..556711)
location: region:556019-556711:-1
so has part: feature:556019-556711:-1:exon

WP_010881967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:556019-556711:-1:exon

TPCCA_RS02535
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02535
old locus tag: TPCCA_0519
so part of: sequence
location: complement(556708..558084)
location: region:556708-558084:-1
so has part: feature:556708-558084:-1:exon
subclass of: SO_0000010

position:556708:-1
position: 556708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558084:-1
position: 558084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556708-558084:-1:exon

TPCCA_RS02535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02535
old locus tag: TPCCA_0519
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881968.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-54 dependent transcriptional regulator
translation: MKFSILVLDDEKNIREGLQMALEDEGYEVFTAEDGNTGVEIALKGDIDLIITDLKMPRMSGELVLQHVHAVLPDIPIIILTGHGTVENAVEAMHKGAYDFLTKPLDLNRLSLLVRRALQNRELIVQHRELIKQIGNRTSFENIVGESPAMNKVFDMVKKAAASKASVLITGESGVGKELIANAIHNLSPRKAKPLIKVHCASFAEGVLESELFGHERGAFTGAVNRMKGRFELAHEGSMFLDEIGEVSMAVQIKLLRVLQERSFERVGGRETIKVDVRVISATNRNLLEEIKRNLFREDLYYRLNVVHIHVPALRERKENLPLLIATFLKEIAEENGKKITSIDPQAQSALHAYDWPGNIRQLRNCIESAVIMSSGPVIHIEDLSEPIRSLGETSSIRIPIGVSMEDAEKEIILQTLEAQKGNKSKTADVLGIGRKTLYLKLDQYTNTSFEPDAAAKS
SIO_010081: TPCCA_RS02535
subclass of: SO_0000673
so part of: TPCCA_RS02535
location: complement(556708..558084)
location: region:556708-558084:-1
so has part: feature:556708-558084:-1:exon

WP_013945157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:556708-558084:-1:exon

TPCCA_RS02540
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02540
old locus tag: TPCCA_0520
so part of: sequence
location: complement(558094..559284)
location: region:558094-559284:-1
so has part: feature:558094-559284:-1:exon
subclass of: SO_0000010

position:558094:-1
position: 558094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559284:-1
position: 559284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558094-559284:-1:exon

TPCCA_RS02540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02540
old locus tag: TPCCA_0520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016517881.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MRDFIARALKKSAKMNDSQLRNMIELIANEYTLLDALMDSLNYGLIVLDCLHIPLKTNRAIARLLGKPLPSNPRRPLWHYLDDEHIAQFIVAIIKNEVGKARAEFIVQRQGETLYLEVSLFPLICDQKIRGSIIAIHDITEKKQEEIYNRRLESLANLTNLAATVAHEIKNPLGAMSIHLQLLRKNFSTCSFETNKRIQKHLHVVEEEIERLNRIVTGFLSAVRPLKLNITRLSVFDLVTSIRDTFYEAFTKAELSFSVHMPHNLPHIRGDEHLLRQALVNIITNAKEAMQRGGALEVFVHKQTDHISISISDTGEGIDARNIHNIFEPYFTTKTEGTGLGLTLTFKVIKEHGGDISVSSTVGRGTCFTLLLPIDKLGRSLLQEKISTHLRHTSKE
SIO_010081: TPCCA_RS02540
subclass of: SO_0000673
so part of: TPCCA_RS02540
location: complement(558094..559284)
location: region:558094-559284:-1
so has part: feature:558094-559284:-1:exon

WP_013945158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558094-559284:-1:exon

TPCCA_RS02545
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02545
old locus tag: TPCCA_0521
so part of: sequence
location: complement(559281..560552)
location: region:559281-560552:-1
so has part: feature:559281-560552:-1:exon
subclass of: SO_0000010

position:559281:-1
position: 559281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560552:-1
position: 560552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559281-560552:-1:exon

TPCCA_RS02545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02545
old locus tag: TPCCA_0521
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945159.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFENIVGQPATDLLRDDVMHARLPAALLFVGPPASGKLTAALELARVLSCTQGGVWQCPCASCVQHTELLSPELLVMGIKDLILEIRASARAYMSVHTQGTRYLFVRAVRKLITRFDERLWDSDDTRFSAAVSNIAELDQELASLPAQGDRRTTPEQKERVQRICVIAERLQQESLYTQLPVQQIRNAIQWVRLTPSGRKKVLIIEHAHAMHESARTAFLKILEEPPRDTLFILTTATKYAIMPTVLSRVRSYSFRERSVELQCAVITRVFHDRPTDAKNTQGVLLHYLYQFLSFSLEEVQTSVMYFWLYVCQHARCIGRIIPDTWVSVGTQPQVSGMDLTSLDSTLHFFQAHKQQHAVSLFFSLLVRHMRTLQRTTEYSARNTECFAHIAHCIEQAHRNVQLWNLTIQGTLEHLAHTIANHL
SIO_010081: TPCCA_RS02545
subclass of: SO_0000673
so part of: TPCCA_RS02545
location: complement(559281..560552)
location: region:559281-560552:-1
so has part: feature:559281-560552:-1:exon

WP_013945159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559281-560552:-1:exon

TPCCA_RS02550
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02550
old locus tag: TPCCA_0522
so part of: sequence
location: complement(560563..561042)
location: region:560563-561042:-1
so has part: feature:560563-561042:-1:exon
subclass of: SO_0000010

position:560563:-1
position: 560563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561042:-1
position: 561042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560563-561042:-1:exon

TPCCA_RS02550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02550
old locus tag: TPCCA_0522
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945160.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CvpA family protein
translation: MTISTLDLILGIIMGIVTVRATMRGFVDEFFSKASILCAAVVAILCHKMLVPLARVLLGHSILLPCITFLITFMGVYCVMLFLRSRMRTYATRDLISGFNQVFGFFFGIIEGSVLLTVILLLLHVQPFVSVSHMLHESVINTVLSPLVLDGVRYMRLKM
SIO_010081: TPCCA_RS02550
subclass of: SO_0000673
so part of: TPCCA_RS02550
location: complement(560563..561042)
location: region:560563-561042:-1
so has part: feature:560563-561042:-1:exon

WP_013945160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:560563-561042:-1:exon

TPCCA_RS02555
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: murG
locus tag: TPCCA_RS02555
old locus tag: TPCCA_0523
so part of: sequence
location: complement(561039..562193)
location: region:561039-562193:-1
so has part: feature:561039-562193:-1:exon
subclass of: SO_0000010

position:561039:-1
position: 561039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562193:-1
position: 562193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561039-562193:-1:exon

TPCCA_RS02555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: murG
locus tag: TPCCA_RS02555
old locus tag: TPCCA_0523
EC number: 2.4.1.227
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881971.1
GO function: GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
translation: MRFRARVSQSTAKCVVFTGGGTGGHIFPGIAVFQALAQQAAVRVVWIGAARGADRSIVESAGLEFCGITAGKWRRYASVRNFFDVFRVLVGTVQSYCILRALRPQALFSKGGFVSVPPCIAAWLLRIPVVTHESDISPGLATRINARFADRILVSYPRTSCYFPRARRAAVHCTGNPVRQDFFSAQAERAYQFLRIDQKKPLLTVLGGSSGARDLNARVLSCSTFLTERFYLVHQFGAGNEDQMHAITNSLSVNARHAYMSFPFIQAHLPDILAASALVLSRAGANAVWECAVLGKPMILFPLERGSSRGDQIENAEYFSAHGAACILRAQDEKGHQLVSLLTELFHPSCTRIEEMARASYTLGIGNAAYDIAQQLQTFIKEGM
SIO_010081: TPCCA_RS02555
subclass of: SO_0000673
so part of: TPCCA_RS02555
location: complement(561039..562193)
location: region:561039-562193:-1
so has part: feature:561039-562193:-1:exon

WP_013945161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:561039-562193:-1:exon

TPCCA_RS02560
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: lon
locus tag: TPCCA_RS02560
old locus tag: TPCCA_0524
so part of: sequence
location: complement(562197..564842)
location: region:562197-564842:-1
so has part: feature:562197-564842:-1:exon
subclass of: SO_0000010

position:562197:-1
position: 562197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564842:-1
position: 564842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562197-564842:-1:exon

TPCCA_RS02560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: lon
locus tag: TPCCA_RS02560
old locus tag: TPCCA_0524
EC number: 3.4.21.53
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881972.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endopeptidase La
translation: MAKDTDIEHDAHEPAGHGDVRESAVENPSASAVSDGEERATFAPEVAPQTDTESAQGAAQESEPEVQRAGEAEKGVPEKAKAVVPLDELLPQKVHLIPLTGRPIYPGIFTPLLISDEDDVRSVESAYSDSGFIGLCLVKTDTQNPTISDLYEVGSVARIVKKINLPDGGLNVFISTQKRFRIRKHVHHSKPIVAAVQYLSDLIEGDPLEIKALVRGLIGEMKELSENNPLFSEEMRLNMINIDHPGKIADFIASILNISKEEQQRTLEILDVRKRMEEVFVYIKKEKDLLEIQRKIQNDLNSRVEKNQREYFLREELRSIKEELGLTTDPKERDQRKFRALIDSFHFEGEVKEAVESELEKLSLTDPNSPEYSVGRTYLETVLSLPWHAPEKEEYDLKKAQKLLDEDHYGLENVKERIVEYLAVRKLRADTKGSIILLVGPPGVGKTSVGKSIARAIHKPFFRFSVGGISDEAEIKGHRRTYIGALPGKVLQGLKIVKTKAPVFMIDEVDKIGSGARGDPAGALLEVLDPEQNTTFRDHYLDLPFDLSHIVFVLTANSTDPIPRPLLDRAEIIRLSGYIDTEKVEIAKRHLVPKTLEKNGLKRACVSYRKEVLLHLVHSYARESGVRGLEKSLDKLHRKLATEIVLGKRSFDDKCLMDEALIGTFLGKPVFRDDMLKDANKVGTAVGLAWTGMGGDTLLVEAITIPGKASFKLTGQMGAVMKESASIALSWLRRYSAQQRIASPNWFEKRAIHLHIPEGATPKDGPSAGITMTTTLFSLLTQQKVKPRLAMTGELSLTGQVLPIGGLKEKTIAARRGGIKEIIMPKANVRDLDEIPEHVKKGMVFHLVESMEEVLSLAFPKGKRVRTGTAAQSVSPETLTG
SIO_010081: TPCCA_RS02560
subclass of: SO_0000673
so part of: TPCCA_RS02560
location: complement(562197..564842)
location: region:562197-564842:-1
so has part: feature:562197-564842:-1:exon

WP_013945162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:562197-564842:-1:exon

TPCCA_RS02565
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: efp
locus tag: TPCCA_RS02565
old locus tag: TPCCA_0525
so part of: sequence
location: 564978..565541
location: region:564978-565541:1
so has part: feature:564978-565541:1:exon
subclass of: SO_0000010

position:564978:1
position: 564978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565541:1
position: 565541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564978-565541:1:exon

TPCCA_RS02565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: efp
locus tag: TPCCA_RS02565
old locus tag: TPCCA_0525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881973.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor P
translation: MIRGGDIAKGTVLLHKGAPYLVVEREFVNPGKGAAFARVKMKHLRDGSVLTQTVKTSDTVEDAVVDSHRAQYQYDDGECFVFMDTRSFEQIFVSKENVPGRERYLREGDEYDILIWNGESIDIKIPTKMVFRVAHSEPYLKGDTVSGATKPVTTETGLVVRVPLFIKQGEKILINTETNEYQERVND
SIO_010081: TPCCA_RS02565
subclass of: SO_0000673
so part of: TPCCA_RS02565
location: 564978..565541
location: region:564978-565541:1
so has part: feature:564978-565541:1:exon

WP_013945163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564978-565541:1:exon

TPCCA_RS02575
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02575
old locus tag: TPCCA_0526
so part of: sequence
location: 565689..567695
location: region:565689-567695:1
so has part: feature:565689-567695:1:exon
subclass of: SO_0000010

position:565689:1
position: 565689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567695:1
position: 567695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565689-567695:1:exon

TPCCA_RS02575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02575
old locus tag: TPCCA_0526
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945165.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent RNA helicase
translation: MFSYKQLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGGAIGVTQPRRIAVLSVSEFIAKQVLHVQPGIVGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSKYSIIMVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNECPVIKIDAVAYPVTVIFDPPDTPASTHTKEAEAALLEKIVCIVERVIASRDKGAILIFLPGERSIKNCITRLSHERWFRKLFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITIDDVTTVIDSGLVKLNSYNPLSYTASLDETPISQASCNQRRGRAGRVRAGTCYRLYSRDDFEQREPYTLEEIYRTDLSEVVMRMAELGIHDFEHFDFISPPGTHGIIGAEDTLRLLGALEDDRSLSEIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVLIAAAFLSARSPLIFSEDQEEKTKKAHGTFSDPMGDFVSFLRIYRAYAQENNKHSFCQHFYLDERIMAEISNIKEQLELIVSGMGFPLLTGGTVEEYLICVGTGMIQFVCVQEHRDSYRSLTAECIHIHPGSCVYKDRPKFIVAGEIVRMSRMYAMSVSPLSKKIAELIAPALLERRGRAEKHGTSPTRAAFLKKSTLRKGPRKRRVRVGRASLR
SIO_010081: TPCCA_RS02575
subclass of: SO_0000673
so part of: TPCCA_RS02575
location: 565689..567695
location: region:565689-567695:1
so has part: feature:565689-567695:1:exon

WP_013945165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565689-567695:1:exon

TPCCA_RS02580
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02580
old locus tag: TPCCA_0527
so part of: sequence
location: complement(567743..568372)
location: region:567743-568372:-1
so has part: feature:567743-568372:-1:exon
subclass of: SO_0000010

position:567743:-1
position: 567743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568372:-1
position: 568372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567743-568372:-1:exon

TPCCA_RS02580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02580
old locus tag: TPCCA_0527
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881975.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: V-type ATP synthase subunit D
translation: MKTPLAPTKSNLAYVKDQLGLARDGYRLLEQKREILFMELTSLLEEVHLLETELDKRRKQAYASLWQLLLAQGRDDIAACALVTPVPCRVQQEVLLIAGLRFLRLDAVMQPPKLQYAALGSSACMDRAREDFGLLLQTLTRMASVQTIVWRLASEMRKTQRRVNALSKQIIPQMCETRMYIESVLEERDRESTFVLKSLKARKDSTTTL
SIO_010081: TPCCA_RS02580
subclass of: SO_0000673
so part of: TPCCA_RS02580
location: complement(567743..568372)
location: region:567743-568372:-1
so has part: feature:567743-568372:-1:exon

WP_013945166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:567743-568372:-1:exon

TPCCA_RS02585
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02585
old locus tag: TPCCA_0528
so part of: sequence
location: complement(568467..569909)
location: region:568467-569909:-1
so has part: feature:568467-569909:-1:exon
subclass of: SO_0000010

position:568467:-1
position: 568467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569909:-1
position: 569909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568467-569909:-1:exon

TPCCA_RS02585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02585
old locus tag: TPCCA_0528
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881976.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: V-type ATP synthase subunit B
translation: MKGVWYRGLSSIDGPIVVAKRREGAFYGEITAIRDRFGALRTGRIIDLSQECCLIQVFGSTLGLSLDGACLEFLDVPMQLRVCEGLMGRVFDGLGRPIDGFPEVLSSQLRNVNGYPINPYARVYPRDFIQTGISAIDGMNTLIRGQKLPIFSGNGLAHNRLAAQIIRQAKILGTDEAFVMVFAGMGIKHDVARFFVSSFEETGVLSKVVMFLSLADAPSIERIITPRCALTAAEYLAFEKNKHVLVIFTDMTNYCEALREVSTTRGEVPGRKGYPGYLYSDLAELYERAGRVKGSSGSVTQIPILTMPNDDISHPIPDLTGYITEGQIVLQRDLSQRGLYPPIGCLPSLSRLMKDGIGEGMTRADHHAVSSQLFASYARVQSVRSLASIVGEEELPALDKCYLRFGDLFEQYFLTQDEHEDRSISQTLDIGWSLLSLLPRTELYRIDPKLIDQYLTASCSAVSDQLRKAIEEARTPVADA
SIO_010081: TPCCA_RS02585
subclass of: SO_0000673
so part of: TPCCA_RS02585
location: complement(568467..569909)
location: region:568467-569909:-1
so has part: feature:568467-569909:-1:exon

WP_010881976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:568467-569909:-1:exon

TPCCA_RS02590
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02590
old locus tag: TPCCA_0529
so part of: sequence
location: complement(569906..571723)
location: region:569906-571723:-1
so has part: feature:569906-571723:-1:exon
subclass of: SO_0000010

position:569906:-1
position: 569906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571723:-1
position: 571723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569906-571723:-1:exon

TPCCA_RS02590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02590
old locus tag: TPCCA_0529
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014343543.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: V-type ATP synthase subunit A
translation: MIKDDVVIGRVVRVSGPIVYAEGLSACSVYDVVDVGEASLIGEIIRLDESKAVVQVYEDDTGMRVGEKVTSLRRPLSVRLGPGLIGTIYDGIQRPLERLFQEDGAFLRPGARSQPLDGSVRWDFRPHCNERGEALCAGIPIAPGSVLGTVQETPSVVHTITVPPDIRGSALSSFKGAGAYTIDEEIGRTDLGEPLFLSQYWPVRRARPFSKKLAVCEPLVTGQRAIDVFFPLSKGGTAAIPGGFGTGKTMTQHAVAKWCDADIIVYIGCGERGNEMTDVLSEFPKLIDPRTGRSLMERTILIANTSNMPVSAREVSLYSGITLAEYYRDMGMHVAIMADSTSRWAEALRELSGRMEEMPAEEGFPAYLPTRLAEFYERAGRVETCVAREGSVSIIGAVSPPGGDFSEPVTQHTKRFIRCFWALDRELAHARHYPAIGWIDSYSEYAQEVSAWWSKYEPRAGALRAAALDLLRKEQRLQQIVRLVGPDALPGEDRLVLMVCEMIKGGFLQQNAFDPTDVFSCPEKQVQILRTIVDFHERAVVLLRAGISLSALSQLSCRELIVRMKTTYGNEDVHKMQKVYDTMCTEFDQLSVCAAARTQGGEKVE
SIO_010081: TPCCA_RS02590
subclass of: SO_0000673
so part of: TPCCA_RS02590
location: complement(569906..571723)
location: region:569906-571723:-1
so has part: feature:569906-571723:-1:exon

WP_013945167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:569906-571723:-1:exon

TPCCA_RS02595
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02595
old locus tag: TPCCA_0530
so part of: sequence
location: complement(571720..572346)
location: region:571720-572346:-1
so has part: feature:571720-572346:-1:exon
subclass of: SO_0000010

position:571720:-1
position: 571720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572346:-1
position: 572346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571720-572346:-1:exon

TPCCA_RS02595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02595
old locus tag: TPCCA_0530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945168.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase
translation: MEELRSTEVLERDIYAEARKRADHILSCARADCAQLEAHASARVQDITRAVEQLFAQRIAAYERNAQAVIPLERIRQTIRAVDTRVQRALASYFEKIGEEKRLRVLARLLERYAPLIGEQKITVRFFGYCESRVRDLLNQALPRAVLRSLTPFDKAEAWRAQCSDGLTIETEDGTLQCRGTIEEICAQLLSEKRQELACALCGNGVVA
SIO_010081: TPCCA_RS02595
subclass of: SO_0000673
so part of: TPCCA_RS02595
location: complement(571720..572346)
location: region:571720-572346:-1
so has part: feature:571720-572346:-1:exon

WP_013945168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:571720-572346:-1:exon

TPCCA_RS02600
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02600
old locus tag: TPCCA_0531
so part of: sequence
location: complement(572352..572669)
location: region:572352-572669:-1
so has part: feature:572352-572669:-1:exon
subclass of: SO_0000010

position:572352:-1
position: 572352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572669:-1
position: 572669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572352-572669:-1:exon

TPCCA_RS02600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02600
old locus tag: TPCCA_0531
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945169.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: V-type ATP synthase subunit F
translation: MTYCIIGEQELVLGFSLVGVHGFVVHSPEEAAHAFSQVTRPPSGDRPAQVLILTQRAMSYLREEVRAWQMQGELPFVVEVPALHEQGNVRTSLRESIRQVIGAKV
SIO_010081: TPCCA_RS02600
subclass of: SO_0000673
so part of: TPCCA_RS02600
location: complement(572352..572669)
location: region:572352-572669:-1
so has part: feature:572352-572669:-1:exon

WP_013945169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:572352-572669:-1:exon

TPCCA_RS02605
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02605
old locus tag: TPCCA_0531a
so part of: sequence
location: complement(572691..572987)
location: region:572691-572987:-1
so has part: feature:572691-572987:-1:exon
subclass of: SO_0000010

position:572691:-1
position: 572691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572987:-1
position: 572987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572691-572987:-1:exon

TPCCA_RS02605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02605
old locus tag: TPCCA_0531a
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009104000.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP synthase subunit C
translation: MGWKRAWFTGVFAGLCVLLNAESQPPSHVDGGLKYIAAGLAVGLACVGGGLAVGKIGAAAMGAMSEDPEISGKALPFIGLAEGICLWGFLVALLIILL
SIO_010081: TPCCA_RS02605
subclass of: SO_0000673
so part of: TPCCA_RS02605
location: complement(572691..572987)
location: region:572691-572987:-1
so has part: feature:572691-572987:-1:exon

WP_013945170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:572691-572987:-1:exon

TPCCA_RS02610
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02610
old locus tag: TPCCA_0533
so part of: sequence
location: complement(572989..574674)
location: region:572989-574674:-1
so has part: feature:572989-574674:-1:exon
subclass of: SO_0000010

position:572989:-1
position: 572989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574674:-1
position: 574674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572989-574674:-1:exon

TPCCA_RS02610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02610
old locus tag: TPCCA_0533
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342463.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: V-type ATP synthase subunit I
translation: MFRSQRMKFLELVVLERDVDRVLEYLGKTALVHLRLSAAACGSSSHCAQSKEYVGRLEEACKYLGVSGECAFSPGDSLPTEEDYTSAQEILAEVDALHAREREGDAPSVPRGKSSVAHDSANEEQFQGEKCALSSMRGPALCALLRRFALQERVHRTRDALESTRHTYRIAGWLPAHEAKDLVAGLDNVTTGRMAVRLFEPQELSFIRDGSEHVPVCYQHGRFVRSYERMVSSYGCPPYGLVDPTPFVAFSYALLFGIMFGDLGQGLLFFVLGLLLRTRRVRALNRWAHLDYVFLSVGFSSMVMGFLTGEFFAHGTLLAPLIRSVTALCGGVPRDHILHLMPSHGSLHTLMAFFGFTLFLGFVINSLGLIINIVNQVRLRHALAAVCSKTGVCGLLFFWYMVALAVRIPLFGIPFGVFDAVAMGVPLVGIFCQEFLERMCKRVRPWFPEGVGMYLMRGVIEMVDVVSGFFSNSMSFLRVGAFALSHAVLSFVVFTMTQFVGGYASLWGILVYVFGNGVIIFLEGLIVAIQAVRLQHCEFFSKFFTKSGSVFAPFRFEYQED
SIO_010081: TPCCA_RS02610
subclass of: SO_0000673
so part of: TPCCA_RS02610
location: complement(572989..574674)
location: region:572989-574674:-1
so has part: feature:572989-574674:-1:exon

WP_013945171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:572989-574674:-1:exon

TPCCA_RS02615
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02615
old locus tag: TPCCA_0534
so part of: sequence
location: complement(574667..575692)
location: region:574667-575692:-1
so has part: feature:574667-575692:-1:exon
subclass of: SO_0000010

position:574667:-1
position: 574667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575692:-1
position: 575692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574667-575692:-1:exon

TPCCA_RS02615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02615
old locus tag: TPCCA_0534
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881981.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: V-type ATPase subunit
translation: MAVERDVADVFVYAKLSGLCARLWVGERLGTLQGVGTLCDLWVRLFSEPAPRSAGAHLVGLIQRRVEACLLRDCVRAASCYQEPPSLFSALLARYDYLYLKTLSSSESQAEFRVCQPPDLGRFSLFRWEKWPCIEAVTRGSPVSWYNRVPRGDERVLWDLRLDQSYYHALWQTLCSIPEDDRAACSRLVREEVALYAVGWVLRLRMFYGVQKKDAPSELSSNGAIRRCLGTWWKCVLFAWDCSLTERGAWGGWRYERFLNNPVDGVQWEPDLDAFERAGSRFLYCLARTVFHAQLFTPATIVAFFMMKRFEARGICALAECIHAGSARTLPREFLGEAAYV
SIO_010081: TPCCA_RS02615
subclass of: SO_0000673
so part of: TPCCA_RS02615
location: complement(574667..575692)
location: region:574667-575692:-1
so has part: feature:574667-575692:-1:exon

WP_013945172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:574667-575692:-1:exon

TPCCA_RS02620
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02620
old locus tag: TPCCA_0535
so part of: sequence
location: complement(575696..575908)
location: region:575696-575908:-1
so has part: feature:575696-575908:-1:exon
subclass of: SO_0000010

position:575696:-1
position: 575696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575908:-1
position: 575908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575696-575908:-1:exon

TPCCA_RS02620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02620
old locus tag: TPCCA_0535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881982.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCESAEAAGETLVKEAEGSVVEAQEQAWHEACARIDAQRREACGQLERELSVLEEDVERFEAFLDGFFFG
SIO_010081: TPCCA_RS02620
subclass of: SO_0000673
so part of: TPCCA_RS02620
location: complement(575696..575908)
location: region:575696-575908:-1
so has part: feature:575696-575908:-1:exon

WP_193386062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575696-575908:-1:exon

TPCCA_RS02625
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: secG
locus tag: TPCCA_RS02625
old locus tag: TPCCA_0536
so part of: sequence
location: complement(576037..576453)
location: region:576037-576453:-1
so has part: feature:576037-576453:-1:exon
subclass of: SO_0000010

position:576037:-1
position: 576037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576453:-1
position: 576453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576037-576453:-1:exon

TPCCA_RS02625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: secG
locus tag: TPCCA_RS02625
old locus tag: TPCCA_0536
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342465.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecG
translation: MAVLSVMILSLLVVVCLLVVALVLLQTEEGDGLGGVFSGGSRSAFGSRSASVLTKTSYVMVGLFFGLTFFLALLNRAPDDTGLQKAAQQKQAETAVEWWKHPPKEGAGAPTSPESTGPAAGNSSGSGIAVPPSPEVRE
SIO_010081: TPCCA_RS02625
subclass of: SO_0000673
so part of: TPCCA_RS02625
location: complement(576037..576453)
location: region:576037-576453:-1
so has part: feature:576037-576453:-1:exon

WP_013945174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:576037-576453:-1:exon

TPCCA_RS02630
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: tpiA
locus tag: TPCCA_RS02630
old locus tag: TPCCA_0537
so part of: sequence
location: complement(576602..577351)
location: region:576602-577351:-1
so has part: feature:576602-577351:-1:exon
subclass of: SO_0000010

position:576602:-1
position: 576602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577351:-1
position: 577351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576602-577351:-1:exon

TPCCA_RS02630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: tpiA
locus tag: TPCCA_RS02630
old locus tag: TPCCA_0537
EC number: 5.3.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881984.1
GO function: GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: triose-phosphate isomerase
translation: MRGYFIAGNWKMHKTCAEAVALAQELVRELRGGPHTYMIAPSFTALDAVGKVLRGSNVLLGAQDVSSEEWGAHTGEVSVLQLEDLGVQVVIVGHSERRHGRGENDKLINQKVRRVLESGLRVILCVGERLQEYEAGCTCEVVGTQVRAGMADVCESLMHNVTVAYEPVWAIGTGKTATPAQANAVHAHIRSVVCEMYGAAIAEALCIQYGGSMKAENARALLAEEHIDGGLIGGASLEAASFVPIARSV
SIO_010081: TPCCA_RS02630
subclass of: SO_0000673
so part of: TPCCA_RS02630
location: complement(576602..577351)
location: region:576602-577351:-1
so has part: feature:576602-577351:-1:exon

WP_013945175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:576602-577351:-1:exon

TPCCA_RS02635
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02635
old locus tag: TPCCA_0538
so part of: sequence
location: complement(577502..578761)
location: region:577502-578761:-1
so has part: feature:577502-578761:-1:exon
subclass of: SO_0000010

position:577502:-1
position: 577502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578761:-1
position: 578761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577502-578761:-1:exon

TPCCA_RS02635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02635
old locus tag: TPCCA_0538
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881985.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglycerate kinase
translation: MMLRTCKDVTMRGERVVVRVDFNVPMRDGMVQDDTRVTAAVPTLRYIIEQGPRHVVLISHLGDPTRDADKAEGKAKKDGCPFDRHAFINGKHRLKPVADCLAKKLGVPVHFAPSCVGQREFIEGLSDGSVVLLENVRFHPEETSGDAKVQEQFARELAQYGDIFVNDAFGTAHREHASTVVLPRLMRRRVAGLLIEREVRYLEPMVCNPKVPMVAVVGGAKVSSKIAVLESLLRTSTALIIGGGMAYTFLKAQGVGVGTSLVEDDFIDTARMLLQKAQSGGVSVVLPVDHVCASTFCADAQPVAVDDVHIPMHLMGMDVGPRTLEQYRAHLKGVSSVLWNGPVGVFEFDAFAHGTRVLAQLIAEATDAGATSVVGGGDSIAAVSKFGLASRMSHVSTGGGASLKLFEGKVLPGISCLET
SIO_010081: TPCCA_RS02635
subclass of: SO_0000673
so part of: TPCCA_RS02635
location: complement(577502..578761)
location: region:577502-578761:-1
so has part: feature:577502-578761:-1:exon

WP_013945176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:577502-578761:-1:exon

TPCCA_RS05325
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS05325
so part of: sequence
location: 578733..578954
location: region:578733-578954:1
so has part: feature:578733-578954:1:exon
subclass of: SO_0000010

position:578733:1
position: 578733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578954:1
position: 578954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578733-578954:1:exon

TPCCA_RS05325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS05325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881986.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSLQVLSIISSFLTQGLPHPPHVAADSHYISKKDSISASVGRLTSLLPCLCALHAYGMGHRSFVIVDIFYAE
SIO_010081: TPCCA_RS05325
subclass of: SO_0000673
so part of: TPCCA_RS05325
location: 578733..578954
location: region:578733-578954:1
so has part: feature:578733-578954:1:exon

WP_193386041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578733-578954:1:exon

TPCCA_RS02640
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02640
old locus tag: TPCCA_t0024
so part of: sequence
location: 578976..579048
location: region:578976-579048:1
so has part: feature:578976-579048:1:exon
subclass of: SO_0000663

position:578976:1
position: 578976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579048:1
position: 579048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578976-579048:1:exon

TPCCA_RS02640
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS02640
old locus tag: TPCCA_t0024
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:579009..579011,aa:Asn,seq:gtt)
SIO_010081: TPCCA_RS02640
subclass of: SO_0000673
so part of: TPCCA_RS02640
location: 578976..579048
location: region:578976-579048:1
so has part: feature:578976-579048:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:578976-579048:1:exon

TPCCA_RS02645
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02645
old locus tag: TPCCA_0540
so part of: sequence
location: 579234..579599
location: region:579234-579599:1
so has part: feature:579234-579599:1:exon
subclass of: SO_0000010

position:579234:1
position: 579234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579599:1
position: 579599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579234-579599:1:exon

TPCCA_RS02645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02645
old locus tag: TPCCA_0540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945178.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anti-sigma factor antagonist
translation: MELKVRQSGGICVVDISGDMDLYHSYKLKDLVLKLFDRGPRCIVIDLEAVEYIDSSGIGVLIYLCSTVKKLKIHFFISGVHGSVKKVIELTRLLNYFPIAESVDEALARARSSAPPQTGSL
SIO_010081: TPCCA_RS02645
subclass of: SO_0000673
so part of: TPCCA_RS02645
location: 579234..579599
location: region:579234-579599:1
so has part: feature:579234-579599:1:exon

WP_013945178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:579234-579599:1:exon

TPCCA_RS02650
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: era
locus tag: TPCCA_RS02650
old locus tag: TPCCA_0541
so part of: sequence
location: 579729..580688
location: region:579729-580688:1
so has part: feature:579729-580688:1:exon
subclass of: SO_0000010

position:579729:1
position: 579729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580688:1
position: 580688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579729-580688:1:exon

TPCCA_RS02650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: era
locus tag: TPCCA_RS02650
old locus tag: TPCCA_0541
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881988.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase Era
translation: MVTDGASPRSGVSLIIGRPSSGKSTFLNAVCGYKVSIVSPIPQTTRNTVRGIVNIESDQIVFMDTPGYHRSDRKFNLRLQSLVHSNVKDADVLLYLVDATRQFGEEEAAICALLAPYQKTRVLLAFNKVDVLHNSTSCDEHAFLHRQGSVLRAGSLGRALHAALPHLPADRVFTISALHQVGLDALMRTLRDLLPEAAPLYPQDCYTDQTIAFRVTELIREQAIARCRDELPHALYAGVEDMELRRGKRELWCRAFLAVERESQKAVLVGKKGAVIRAIRLDAIRALRTLLPYHISLDIRVKVDRSWRQRDHTLSSLLY
SIO_010081: TPCCA_RS02650
subclass of: SO_0000673
so part of: TPCCA_RS02650
location: 579729..580688
location: region:579729-580688:1
so has part: feature:579729-580688:1:exon

WP_010881988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:579729-580688:1:exon

TPCCA_RS02655
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02655
old locus tag: TPCCA_0542
so part of: sequence
location: complement(580685..582406)
location: region:580685-582406:-1
so has part: feature:580685-582406:-1:exon
subclass of: SO_0000010

position:580685:-1
position: 580685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582406:-1
position: 582406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580685-582406:-1:exon

TPCCA_RS02655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02655
old locus tag: TPCCA_0542
EC number: 2.7.1.90
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881989.1
GO function: GO:0047334 - diphosphate-fructose-6-phosphate 1-phosphotransferase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diphosphate--fructose-6-phosphate 1-phosphotransferase
translation: MSISLLQQERHRYLPKVPDLLRGDFRRVCARRGLSTTAVADHDALRSLFARTYGQPLVNFVNASEKNEDSPMETAPEPRGLRVAIVLSGGQAPGGHNVIAGLFDGLKRWHADSVLIGFLGGPAGVLSGDHIEICADRVDAYRNTGGFDLIGSGRTKIESESQFTAAAQTVTRMALDALVVVGGDDSNTNAALLAEHFVNSGISTKVIGVPKTIDGDLKNEAIETSFGFDTATKTYSELIGNIARDACSARKYWHFIKLMGRSASHIALECALKTQPNVCLISEEVAAQSLTLAQIVQSLCDTIATRAQHGENFGIVLVPEGLIEFIPEMKALITELNEVMARRAQEFEALDTPDAQRVWIEQALSASARAVFNALPAEISTQLLADRDPHGNVQVSRIDTERLLILQVTESLAQMKQEGTYTGVFSSIAHFFGYEGRCAFPSNFDADYCYTLGLTACLLAVHRFTGYVASVRNLTSSVAEWAVGGVPLTMLMNMERRHGSQKPVIKKALVDLEGMPFRVFSRRRASWALKTSYVYPGAIQYYGPPAVCDEPSVTIRLERPAPAANSSFGHRSS
SIO_010081: TPCCA_RS02655
subclass of: SO_0000673
so part of: TPCCA_RS02655
location: complement(580685..582406)
location: region:580685-582406:-1
so has part: feature:580685-582406:-1:exon

WP_013945180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:580685-582406:-1:exon

TPCCA_RS02660
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: ruvA
locus tag: TPCCA_RS02660
old locus tag: TPCCA_0543
so part of: sequence
location: complement(582465..583148)
location: region:582465-583148:-1
so has part: feature:582465-583148:-1:exon
subclass of: SO_0000010

position:582465:-1
position: 582465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583148:-1
position: 583148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582465-583148:-1:exon

TPCCA_RS02660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: ruvA
locus tag: TPCCA_RS02660
old locus tag: TPCCA_0543
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945181.1
GO component: GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO function: GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Holliday junction branch migration protein RuvA
translation: MFESISGILTLHERERLCVEVHGIEWEIAVSAYSSAAFGEVGSHVKVFTWLYHREDALRLFGFSNVQERTLFLSLTKVEGIGPKQALKVLSSISSQALCAALDTEDLCALQRIPGIGKKTAQRMLLALKGTLALTDAASCAQSQTDDRAAHSSNLGCAPHAREIEDLVTALVQMGYDRKMAAEVIAQESAALCSVGRSLYEEEATVLKRAILALSIAHPHAVAPAAE
SIO_010081: TPCCA_RS02660
subclass of: SO_0000673
so part of: TPCCA_RS02660
location: complement(582465..583148)
location: region:582465-583148:-1
so has part: feature:582465-583148:-1:exon

WP_013945181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:582465-583148:-1:exon

TPCCA_RS02665
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02665
old locus tag: TPCCA_0544
so part of: sequence
location: complement(583190..585064)
location: region:583190-585064:-1
so has part: feature:583190-585064:-1:exon
subclass of: SO_0000010

position:583190:-1
position: 583190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585064:-1
position: 585064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583190-585064:-1:exon

TPCCA_RS02665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02665
old locus tag: TPCCA_0544
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460567.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SpnA family nuclease
translation: MSGKVAGACVGVIFWIVGTGSWCSAASVPHSIGAIQGEGHRSAYEGKHVRDVRGVVTAIARSGKRPIGFYFQDPHGDGNPKTSDGIFVYCGKAFPDSLRVGDYVAVLGTVSEYISKGNARDLSVTQLVIKRAQDVRVLAHGRELPEPVLISYARVSQPVFVSNLADLAPDAETIDFYESVEGMRVQMVNPTVPAVAYRSTYYLLPGDTPSTRLNMHGGYVYEQTHIHPVLAFCPRRMFDSLPEVFKSAPPLPGDSFEGTVVGIMGYSSSSYQLELAEPLPPLRRSGFSPEVSTIQFNARFLNIASYNVENFSAGNKADSARARVFAKHFVNDLKAPDVICLVEIQDDDGAKKHHHCTSAQHTLDLLVRAMAEFSAVRYKAVNIDPQDNAPAGVQSLDADGGQPGGNIRCCYLYRTDRVQLVQDQTGSAGTGTFHSVAQMVRGGRQMVKNPARIGVGQESFQNTRKSLVAHFQFVSGVNKGKDFVVVTNHFSSKRGADPVWGSTQPAQEHSKRKRIQQAAQVAAFVAALRRERADLPVVVAGDFNDFWFSDVIQKFTAVGMRSALDLLPETERYTYVHRGYSQTLDNILSVGARTETADILHINAEQPARERVSDHDPVFVQLSW
SIO_010081: TPCCA_RS02665
subclass of: SO_0000673
so part of: TPCCA_RS02665
location: complement(583190..585064)
location: region:583190-585064:-1
so has part: feature:583190-585064:-1:exon

WP_013945182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:583190-585064:-1:exon

TPCCA_RS02670
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02670
old locus tag: TPCCA_0545
so part of: sequence
location: complement(585089..586120)
location: region:585089-586120:-1
so has part: feature:585089-586120:-1:exon
subclass of: SO_0000010

position:585089:-1
position: 585089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586120:-1
position: 586120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585089-586120:-1:exon

TPCCA_RS02670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02670
old locus tag: TPCCA_0545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881992.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: galactose ABC transporter substrate-binding protein
translation: MCALGAGACKRSERPTIGVVVYQYDNTLVARLRHIISTVGKKHARILIVDSQASQSIQNKHIDQFIARGVHGLAVNLVDHRAARTVIEKAQQARIPLVFFNRMPDLSDLNRYARAYYVGVKDDELGLPQSRLVAQYLERTPSADKNADGIIQCVVLKGDPDHKSGARCARYVCQALREIGLKGEIIGEAFALDSRVKGQAAMHTLIHTHGDRIEAVFANDDDAALGAIEALQSAGFFKENKRVPVVGIDATASALKAIEEDLMLGTVLNDVSSQGKAILNLLFALMGDSVPSIPAEDSTAFTHAGNGLAGRAAVFGTAEKQCVWIPYKVVTKENYRTVQNYLR
SIO_010081: TPCCA_RS02670
subclass of: SO_0000673
so part of: TPCCA_RS02670
location: complement(585089..586120)
location: region:585089-586120:-1
so has part: feature:585089-586120:-1:exon

WP_013945183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:585089-586120:-1:exon

TPCCA_RS02675
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02675
old locus tag: TPCCA_0546
so part of: sequence
location: complement(586135..587850)
location: region:586135-587850:-1
so has part: feature:586135-587850:-1:exon
subclass of: SO_0000010

position:586135:-1
position: 586135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587850:-1
position: 587850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586135-587850:-1:exon

TPCCA_RS02675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02675
old locus tag: TPCCA_0546
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342736.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S1C family serine protease
translation: MKTASLCLRSAWLNVALGGVLGVLSGCRVFDERADVRVDRTGKEYLDAQVACAKEELRARPLRALMCAIALKRNAPAHQKVDQLYAQALARVKEAFHHSVEKQKWSEALVFFRSLSALRIPLKDWTERSLHRAQIEQWKKEGAHVLVAAQEKRAGTSAARSPAAMIKGTVTILVDRGIRVEHGRGFADRVIGSGFFIDKRGYIVTNYHVIRSEVDPAYEGYSRAYIKLPSDNTVKVPVRVVGWDALADLALLKTEITPEVVFGLGSSKNLDVGSKIYAIGSPAGLERTLTSGIVSAKKRKLLSVGGGVLQIDASINRGNSGGPVIDEEGCVQAVAFAGVEQHAGLNFAIPVELLKQVLPSLYRGGLVTHPWLGAFGETHRVWKNAGVGGVLSSYVIPGSPLSYAGIPEGAIITTVNDASVSCVADLQAELEKYVPETIVRLAGYRLRDKSKLHDLAAYEQDEWYCQLGVRPEHPARILYKYDLSYRAFLPLFGMHLARTGTRNTYRVESLVPGNFADEHGFSTYDVIEIQNIYMIEASEAIVADVYAKRRKAGYIDTFMRLVAALDNPSFF
SIO_010081: TPCCA_RS02675
subclass of: SO_0000673
so part of: TPCCA_RS02675
location: complement(586135..587850)
location: region:586135-587850:-1
so has part: feature:586135-587850:-1:exon

WP_013945184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586135-587850:-1:exon

TPCCA_RS02680
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: ispH
locus tag: TPCCA_RS02680
old locus tag: TPCCA_0547
so part of: sequence
location: complement(587847..588977)
location: region:587847-588977:-1
so has part: feature:587847-588977:-1:exon
subclass of: SO_0000010

position:587847:-1
position: 587847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588977:-1
position: 588977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587847-588977:-1:exon

TPCCA_RS02680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: ispH
locus tag: TPCCA_RS02680
old locus tag: TPCCA_0547
EC number: 1.17.7.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342737.1
GO function: GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO process: GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
translation: MRKVNCIKVITRAHTLGYCGGVRMAVRMAEHARAHHRGSVYTLGPLVHNPVTLARLRAHGIECLDPAHLSFALHAPAAPGAAPHAAEEKTERTVVIRAHGVAPEVYEALERSGAQVVDATCPRVKESQRRAQGFAAQGLHVILAGDRNHGEIVGIEGYVRAGAAQACSHLPGGAPDGMLPQVQCFVVQNAREAAALPCLARAALLAQTTITQGEYDAIAAAARTRVRELTVARTICAATARRQAALRALAPTVEALLVIGGAHSANTQRLLHTARETSLPTWLVERVEDIPPDIYAFSAVGISAGASTPDCVIAAVEQALRTGGAPVASRVSSSALPKVSTCRAVCAAATSSVGSAGASGAVSPGAVRPFAAGSVR
SIO_010081: TPCCA_RS02680
subclass of: SO_0000673
so part of: TPCCA_RS02680
location: complement(587847..588977)
location: region:587847-588977:-1
so has part: feature:587847-588977:-1:exon

WP_013945185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:587847-588977:-1:exon

TPCCA_RS02685
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02685
old locus tag: TPCCA_0548
so part of: sequence
location: 589141..590430
location: region:589141-590430:1
so has part: feature:589141-590430:1:exon
subclass of: SO_0000010

position:589141:1
position: 589141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590430:1
position: 590430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589141-590430:1:exon

TPCCA_RS02685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02685
old locus tag: TPCCA_0548
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014343544.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UPF0164 family protein
translation: MISCSVRKSPALGASGRRCAAFLAFALLPVLSSGLGVQVAVAARGGGSHPGRESFLQFLIPSGGRYEYLGVSFTALADDASFFEANPAGSAGLSRGEVALFHHSQIQDSHTETVSFARRTQNTGYGASVRAFSSESDLKSFCGGKGGGKGGGKGGGKGGGKGGGKQGAGFVAIANASHTFCGQYRFKGVSFGCNFKMGFRKGNTNKHVTVAGDLGLRAAFSVAKNFGSNEPNMHVGLVLKNAGISVKIEDNKVESLDPAVSVGFAYRPVYAFLLSLGLQQTLNKMEPPVCSVGFMLFCTHRVTLLASAACKGTGYALSGGAEIRIGSFHLDMGYRYDRIFQVTLPHHVSVGLKWLIPNGGTQADQALLVKESYLVGLRFYDQRRYQEAITAWQLTLRQDPGFEPAAEGIEHARRFLKLHEKLSLFDILN
SIO_010081: TPCCA_RS02685
subclass of: SO_0000673
so part of: TPCCA_RS02685
location: 589141..590430
location: region:589141-590430:1
so has part: feature:589141-590430:1:exon

WP_245522076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:589141-590430:1:exon

TPCCA_RS02690
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02690
old locus tag: TPCCA_0549
so part of: sequence
location: 590580..593024
location: region:590580-593024:1
so has part: feature:590580-593024:1:exon
subclass of: SO_0000010

position:590580:1
position: 590580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593024:1
position: 593024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590580-593024:1:exon

TPCCA_RS02690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02690
old locus tag: TPCCA_0549
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342739.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp protease ATP-binding subunit
translation: MLQDLSANARKVLLELGQTVAREARASLLQPEHILLALIQHKVGRGYKLIEKLIEDVATVRLILEQHVLTNEGDVASPQDLPVSGRVKHLLDIAAMEARSLRCAYIGTEHLVIAFAREEQNPLFQSLIREGLSLDDLRNASIISSPHSDTTRTRLERKVASVLDEYGTDLTERARAGALNPVIGRNKEITRVIQILCRRGKNNPVLIGEPGVGKTSIVEGLAYAIVREEVPHILLHTRVVSLDLAAVIAGTKYRGQFEERLKRIIKEVEEAEKVILFIDELHTLIGAGGTQGSLDAANMLKPALARGQIQCIGATTLAEYRRYFEKDAALTRRFRSVLVREPSFEETCTILRKIKSHYERHHQVIYQSDALEKIVELSRRYIPERFFPDKAIDLMDEVGAMKRVQQRADTQVLRSFSIRVANLTTDTERAIALEDWARARSLHTDVVQLRRRLHALKVEWSAREALSIFAEDVAQAVSLMTDIPVHSLEGDELCRFTNIERDLCATVRGQREAIATLARAIVRARVGISSDTRPIGSFLFLGPTGVGKTLLAKTLAEFLFGSADALIRIDMSDYMERYNTSRLMGAPPGYVGFENGGLLTERVRHRPFSVILLDEIEKAHPDVFNVLLQVLEEGELQDNLGHTVNFRNTIIIMTSNAGTRGLGENVPGFQTARARNIEYRQLRVQALREIKRIFSPEFLNRVDECVVFAPLERETLQEILECELKKLAERLRGKDIVLRYSAAAKAYCLEHGFDPFLGARPLRRVLQQEIENELALRMIHGTLRAGSCVHIDSDGVRLHLSTEKSYLTLHPQEI
SIO_010081: TPCCA_RS02690
subclass of: SO_0000673
so part of: TPCCA_RS02690
location: 590580..593024
location: region:590580-593024:1
so has part: feature:590580-593024:1:exon

WP_013945188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:590580-593024:1:exon

TPCCA_RS02695
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: mnmE
locus tag: TPCCA_RS02695
old locus tag: TPCCA_0550
so part of: sequence
location: complement(593065..594552)
location: region:593065-594552:-1
so has part: feature:593065-594552:-1:exon
subclass of: SO_0000010

position:593065:-1
position: 593065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594552:-1
position: 594552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593065-594552:-1:exon

TPCCA_RS02695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: mnmE
locus tag: TPCCA_RS02695
old locus tag: TPCCA_0550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881997.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
translation: MRAHEYALDDDIVAIATALSPAALGIVRTSGSSSIERVASFFSRAQALMRARAHTFLHGWILDGKTRVDEVVLLVYRAPHSFTGEHAVEIICHGGVRTVQAVYRLCLAQGFRAAQRGEFSFRSFFHGKRDLTRIEAIQSLVDARTCAAQQQAVLHLSGALQKEIAALTRALLAFSATLQGEIEYPEDEETRVHDVDMRELEPLVERLRRLRACWQERALQRTGVRIVLGGCPNAGKSSLFNALLGQDRAIVSSVPGTTRDWLEADLDLSGIPVRLCDTAGLRVTDNPIEAQGVVRSEQLLQGADCVFYIINGRAGVQAADCAFLSDCAVPLVVVVTHHDLMSMSERTQVCQAVQSFVSAPVLSCARSQDERGAGEQCLAGGKNEEVRDRAPRAFVCVSAKTHAGLDALRAQTLHLLHGGQVPYEELSLGSERQYVLVDAAVQALEHAQEAYARGFGLDAVVHDLEEALYHCGALTGEVHSEDILDALFEKLCVGK
SIO_010081: TPCCA_RS02695
subclass of: SO_0000673
so part of: TPCCA_RS02695
location: complement(593065..594552)
location: region:593065-594552:-1
so has part: feature:593065-594552:-1:exon

WP_013945189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:593065-594552:-1:exon

TPCCA_RS02700
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02700
old locus tag: TPCCA_0551
so part of: sequence
location: complement(594556..595644)
location: region:594556-595644:-1
so has part: feature:594556-595644:-1:exon
subclass of: SO_0000010

position:594556:-1
position: 594556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595644:-1
position: 595644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594556-595644:-1:exon

TPCCA_RS02700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02700
old locus tag: TPCCA_0551
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945190.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatase PAP2 family protein
translation: MEEFIFWNLSVIHAVQQAAHPVITHAVVLFTFFGGKGIALCSLWVLWCVEYRKGLAIAYALACSEGLNYALKGLLRVPRPFVRDPSVKLVFHDGFSTPSGHAQASALFVLLARSYPSAKTPVPCFCAPGCGTDRQVGDRENPSSYGQERTPLAHTAWTSVAGVLFVGVIGISRVYLGVHYPIDVLLGWLNAVLFGALVLGMRRALRRGVVFFTRVQEVSGRSLAGLRFSAVVCIALLLAVGGADVSMCGAFCGLGAGHLFIFDRWVTRRTPAGGVGFHAAGGSFTQKVVRFCVGCVFCSVVSSALHALFSGAPAEYARLLRFVRYGIGASLSTGVVPLLFLRVGLAGGLSFHAPAPTAVRER
SIO_010081: TPCCA_RS02700
subclass of: SO_0000673
so part of: TPCCA_RS02700
location: complement(594556..595644)
location: region:594556-595644:-1
so has part: feature:594556-595644:-1:exon

WP_013945190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:594556-595644:-1:exon

TPCCA_RS02705
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02705
old locus tag: TPCCA_0552
so part of: sequence
location: complement(595657..596190)
location: region:595657-596190:-1
so has part: feature:595657-596190:-1:exon
subclass of: SO_0000010

position:595657:-1
position: 595657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596190:-1
position: 596190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595657-596190:-1:exon

TPCCA_RS02705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02705
old locus tag: TPCCA_0552
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881999.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQSLEPLITKQLRPAPVGVPEGTPQQVLYVLTWSALTQVDKYRISTAVPAVSGVYELYYMDEARALNLLTAAHAWYGGLRGNVRAAVDPHETADPARRALLTDATLYYRYSVSHSRDDMCDLVWFLHTQYFPGSVRVQHSGRYSAIFVQERAPDRVYWLEDLPHRTERGSMQTRVSK
SIO_010081: TPCCA_RS02705
subclass of: SO_0000673
so part of: TPCCA_RS02705
location: complement(595657..596190)
location: region:595657-596190:-1
so has part: feature:595657-596190:-1:exon

WP_010881999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:595657-596190:-1:exon

TPCCA_RS02710
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02710
old locus tag: TPCCA_t0025
so part of: sequence
location: complement(596266..596337)
location: region:596266-596337:-1
so has part: feature:596266-596337:-1:exon
subclass of: SO_0000663

position:596266:-1
position: 596266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596337:-1
position: 596337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596266-596337:-1:exon

TPCCA_RS02710
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 545776
locus tag: TPCCA_RS02710
old locus tag: TPCCA_t0025
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(596303..596305),aa:Cys,seq:gca)
SIO_010081: TPCCA_RS02710
subclass of: SO_0000673
so part of: TPCCA_RS02710
location: complement(596266..596337)
location: region:596266-596337:-1
so has part: feature:596266-596337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:596266-596337:-1:exon

TPCCA_RS02715
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02715
old locus tag: TPCCA_0553
so part of: sequence
location: 596434..597645
location: region:596434-597645:1
so has part: feature:596434-597645:1:exon
subclass of: SO_0000010

position:596434:1
position: 596434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597645:1
position: 597645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596434-597645:1:exon

TPCCA_RS02715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02715
old locus tag: TPCCA_0553
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010882000.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AI-2E family transporter
translation: MEKQSPAQTISLFVLLALMFVLVCMLFVPYLTVLLWSSILAILLSPCYRALCARIDMHAFTRTRHLVSHMNGEDGCTAAITRATRFQKKMLAAVFSLVITLLVTTVFFFIAISLFGQGKLLFDKLSLFFREYDLFEGAKQRSFTALIFKLSRGTVDISTLNVEEHLLRFFGKHVESVFVYTQIFVKNIARAALSTLFFSFTLYFFFLDGEHLSCLLIAALPLRKRASAQLLEKCKEATRHLFKGLFSIAFYQTCVAFVFYGIFRVEGPMALAMLTFFASFLPLVGCACVWLPVGISIGFTSGWMRGTLFLFVAGSSITIIDSFLRPLLLQNKMRIHPLLIFFSMLGGVQTFGFNGMVLGPILVILLFTVIDLTHDGESHYTSIFHDPPAAGVHAQSIHRQGKK
SIO_010081: TPCCA_RS02715
subclass of: SO_0000673
so part of: TPCCA_RS02715
location: 596434..597645
location: region:596434-597645:1
so has part: feature:596434-597645:1:exon

WP_010882000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:596434-597645:1:exon

TPCCA_RS02720
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02720
old locus tag: TPCCA_0554
so part of: sequence
location: 597689..598348
location: region:597689-598348:1
so has part: feature:597689-598348:1:exon
subclass of: SO_0000010

position:597689:1
position: 597689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598348:1
position: 598348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597689-598348:1:exon

TPCCA_RS02720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02720
old locus tag: TPCCA_0554
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010882001.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD family hydrolase
translation: MTRACIFDLDGTLTNTLETIAYFVNMQAAHYHLPPIPSEKFALFLGDGSRALIQRVLAHYGAAAQTISEDEFLQRYCLAYEADFLQRCTVYPGVPEMLVELKRRRIELAILSNKPHSIAQKVASAFFGDNVFSVVLGQREGVPVKPDPAGLFEILRTLNVETAEALFVGDTAVDIRTASAAQVRSVGVLWGFRDATELSQAQAHVLIRTPAELLQHLSF
SIO_010081: TPCCA_RS02720
subclass of: SO_0000673
so part of: TPCCA_RS02720
location: 597689..598348
location: region:597689-598348:1
so has part: feature:597689-598348:1:exon

WP_245522077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:597689-598348:1:exon

TPCCA_RS02725
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02725
old locus tag: TPCCA_0555
so part of: sequence
location: complement(598422..599603)
location: region:598422-599603:-1
so has part: feature:598422-599603:-1:exon
subclass of: SO_0000010

position:598422:-1
position: 598422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599603:-1
position: 599603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598422-599603:-1:exon

TPCCA_RS02725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02725
old locus tag: TPCCA_0555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014342482.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dicarboxylate/amino acid:cation symporter
translation: MAGSAGFWLLAKLSGGMVCGVALGLCVNESVMAIVHTGKTLIGGVVFFVIPLVIFGFIAPTVLSLKASAGRMLGSFLVLSYLSSVGASLFATAMGRVVIPYLRIPRTVEGLRTIPKVIFTLEIPSLMPVVTALAFALLVGLSALWVKARAVEQVLYEFRRMMGEAISRVLVPLLPFFVAATFAELAYSGSLTRQLPLFAKVVAVVIVGHLLWLCVLYLVGWILSRKNPFEVLRHYGAAYATALGTMSSAATLPVSLQCAHKSRALPAEIVDFAIPLGATTHLCGSVLTETFFCLTIAQMLYGSMPSLADMVLFSCLFGIFAVGAPGVPGGTVLASLGLVLDVLHFDTTGTGLLIAIFALQDSFGTACNITGDGALALMLRGLRYTPAGELRWA
SIO_010081: TPCCA_RS02725
subclass of: SO_0000673
so part of: TPCCA_RS02725
location: complement(598422..599603)
location: region:598422-599603:-1
so has part: feature:598422-599603:-1:exon

WP_013945192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598422-599603:-1:exon

TPCCA_RS02730
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: asnA
locus tag: TPCCA_RS02730
old locus tag: TPCCA_0556
so part of: sequence
location: complement(599826..600818)
location: region:599826-600818:-1
so has part: feature:599826-600818:-1:exon
subclass of: SO_0000010

position:599826:-1
position: 599826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600818:-1
position: 600818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599826-600818:-1:exon

TPCCA_RS02730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
gene: asnA
locus tag: TPCCA_RS02730
old locus tag: TPCCA_0556
EC number: 6.3.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010882003.1
GO function: GO:0004071 - aspartate-ammonia ligase activity [Evidence IEA]
GO process: GO:0006529 - asparagine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate--ammonia ligase
translation: MEKSFILQQQGISFAKHTFTQKLMEHLGLIEVQGPLLSQVGDGIQDGLSGREKAVSVSVKQIPGTAFEVVHSLAKWKRHTLARYGFQDNEGLFVHMIALRPDEDSLDQVRSVCVDQWDWEKVVPVGSRNLAYLKDTVRKVYGALRESEVLVSEKFGLRAFLPADIVFVQSEELVRRYPHLDSKGREDAICKEHGAVFLIGIGGVLSDGKPHDVRAPDYDDWTTPSEGEYKGLNGDILVWNPVLGRAFEVSSMGIRVDESALRTQLALTGDEDSLACSWHQDLINGRLPQSIGGGIGQSRLAMLLLQRKHIGEVQASVWPQSVREEFENIL
SIO_010081: TPCCA_RS02730
subclass of: SO_0000673
so part of: TPCCA_RS02730
location: complement(599826..600818)
location: region:599826-600818:-1
so has part: feature:599826-600818:-1:exon

WP_041609995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:599826-600818:-1:exon

TPCCA_RS02735
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02735
old locus tag: TPCCA_0557
so part of: sequence
location: 600923..601636
location: region:600923-601636:1
so has part: feature:600923-601636:1:exon
subclass of: SO_0000010

position:600923:1
position: 600923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601636:1
position: 601636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600923-601636:1:exon

TPCCA_RS02735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02735
old locus tag: TPCCA_0557
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945194.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1007 family protein
translation: MKKRMWRAVRTLLIICAGGTGALWAHPHVFIRTKVTFQWQKGVLQRAHITWEFDPFFSADIISGYDTNKDGLFDKKETQQVFENAFIHTKHYSFFTFIRSGEPHARHTRSQAARTSPQSVQHFSVSQKDGTLSYHFSIDLSSYQHAKSAPPGTRRTLYLALYDHSFFCDFRYAEHDTVRFVCDKARVQPSYEIVENRTAPVYYDPFDSIESTPQYEHWRPGLHTYYPKEILLRYTAP
SIO_010081: TPCCA_RS02735
subclass of: SO_0000673
so part of: TPCCA_RS02735
location: 600923..601636
location: region:600923-601636:1
so has part: feature:600923-601636:1:exon

WP_013945194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:600923-601636:1:exon

TPCCA_RS02740
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
locus tag: TPCCA_RS02740
old locus tag: TPCCA_0558
so part of: sequence
location: 601666..602574
location: region:601666-602574:1
so has part: feature:601666-602574:1:exon
subclass of: SO_0000010

position:601666:1
position: 601666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602574:1
position: 602574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601666-602574:1:exon

TPCCA_RS02740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 545776
locus tag: TPCCA_RS02740
old locus tag: TPCCA_0558
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945196.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nickel/cobalt transporter
translation: MKKVGVRVRACILCALAACATGVLANPFFGGAPARPRRQRTPELLLRRYALVHQRLGAAIVQWSKTHSTRAWWITVMLSFAYGVLHALGPGHRKAALFSFYLGRNAPVWEPALTAALLAALHGAASLLLLSAFRGVSGAIGAHSARTMWHMEVGSYGLLTFLALFSLVHELMHLFPSGGRYFSCGCSAHTAVCMRTGTVAHMQWGTMLLSGLFICPAALFVMILVLSLDAVGLGVAAVLSISAGLALPLMAVGYLAWASRAGIFYRMQKNTRHAQAVLSVVSITSYGIMLIVCTSALVASLG
SIO_010081: TPCCA_RS02740
subclass of: SO_0000673
so part of: TPCCA_RS02740
location: 601666..602574
location: region:601666-602574:1
so has part: feature:601666-602574:1:exon

WP_013945196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:601666-602574:1:exon

TPCCA_RS02745
type: Gene
subclass of: SO_0000704
RO_0002162: 545776
gene: thiI
locus tag: TPCCA_RS02745
old locus tag: TPCCA_0559
so part of: sequence
location: 602636..603841
location: region:602636-603841:1
so has part: feature:602636-603841:1:exon
subclass of: SO_0000010