Rhodococcus opacus PD630 plasmid pRoPD630_1.
Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Nocardiaceae; Rhodococcus.
Submitted (07-AUG-2021) Department of Pharmacy and Biotechnology, University of Bologna, Via Irnerio, 42, Bologna 40126, Italy
REFSEQ INFORMATION: The reference sequence is identical to\nCP080955.1.\nBacteria and source DNA available from culture collection\nidentifier: DSMZ 44193.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: canu v. 2.2\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 438.9x\nSequencing Technology :: Oxford Nanopore MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/29/2022 07:59:14\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 8,336\nCDSs (total) :: 8,270\nGenes (coding) :: 8,070\nCDSs (with protein) :: 8,070\nGenes (RNA) :: 66\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 3\nPseudo Genes (total) :: 200\nCDSs (without protein) :: 200\nPseudo Genes (ambiguous residues) :: 0 of 200\nPseudo Genes (frameshifted) :: 118 of 200\nPseudo Genes (incomplete) :: 123 of 200\nPseudo Genes (internal stop) :: 14 of 200\nPseudo Genes (multiple problems) :: 48 of 200\n##Genome-Annotation-Data-END##
Germany: gas-works plant 10 km north of Gottingen
COORDINATES: similar to AA sequence:RefSeq:WP_009475427.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
Clp protease N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005563124.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_013414456.1
COORDINATES: similar to AA sequence:RefSeq:WP_009475337.1
COORDINATES: similar to AA sequence:RefSeq:WP_005563123.1
COORDINATES: similar to AA sequence:RefSeq:WP_005254288.1
helix-turn-helix domain-containing protein
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_005254290.1
COORDINATES: similar to AA sequence:RefSeq:WP_005254291.1
COORDINATES: similar to AA sequence:RefSeq:WP_005254292.1
COORDINATES: similar to AA sequence:RefSeq:WP_005570653.1
COORDINATES: similar to AA sequence:RefSeq:WP_005570654.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245117.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245116.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245115.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005254297.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245113.1
COORDINATES: similar to AA sequence:RefSeq:WP_005254298.1
COORDINATES: similar to AA sequence:RefSeq:WP_005254299.1
COORDINATES: similar to AA sequence:RefSeq:WP_005254300.1
COORDINATES: similar to AA sequence:RefSeq:WP_005573952.1
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005254302.1
COORDINATES: similar to AA sequence:RefSeq:WP_010839666.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011331197.1
COORDINATES: similar to AA sequence:RefSeq:WP_016881272.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015303617.1
COORDINATES: similar to AA sequence:RefSeq:WP_005241288.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005254308.1
COORDINATES: similar to AA sequence:RefSeq:WP_011600542.1
COORDINATES: similar to AA sequence:RefSeq:WP_016881276.1
COORDINATES: similar to AA sequence:RefSeq:WP_011600540.1
COORDINATES: similar to AA sequence:RefSeq:WP_012687109.1
COORDINATES: similar to AA sequence:RefSeq:WP_016881280.1
COORDINATES: similar to AA sequence:RefSeq:WP_016881281.1
COORDINATES: similar to AA sequence:RefSeq:WP_005572406.1
COORDINATES: similar to AA sequence:RefSeq:WP_005263122.1
COORDINATES: similar to AA sequence:RefSeq:WP_011600533.1
COORDINATES: similar to AA sequence:RefSeq:WP_005572342.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245088.1
COORDINATES: similar to AA sequence:RefSeq:WP_012687119.1
COORDINATES: similar to AA sequence:RefSeq:WP_012687120.1
COORDINATES: similar to AA sequence:RefSeq:WP_016880467.1
COORDINATES: similar to AA sequence:RefSeq:WP_016881293.1
COORDINATES: similar to AA sequence:RefSeq:WP_011599471.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005263111.1
COORDINATES: similar to AA sequence:RefSeq:WP_011599476.1
GO:0106274 - NAD+-protein-arginine ADP-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005574598.1
COORDINATES: similar to AA sequence:RefSeq:WP_005263107.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
ADP-ribosylglycohydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006545048.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012997999.1
COORDINATES: similar to AA sequence:RefSeq:WP_020498848.1
COORDINATES: similar to AA sequence:RefSeq:WP_012686980.1
COORDINATES: protein motif:HMM:TIGR00573.1
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015294566.1
COORDINATES: protein motif:HMM:NF022169.2
COORDINATES: similar to AA sequence:RefSeq:WP_009473570.1
saccharopine dehydrogenase NADP-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016882020.1
COORDINATES: similar to AA sequence:RefSeq:WP_012687018.1
COORDINATES: similar to AA sequence:RefSeq:WP_009478649.1
COORDINATES: similar to AA sequence:RefSeq:WP_011599299.1
COORDINATES: similar to AA sequence:RefSeq:WP_011600421.1
COORDINATES: similar to AA sequence:RefSeq:WP_009475927.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009475917.1
COORDINATES: similar to AA sequence:RefSeq:WP_011600407.1
COORDINATES: similar to AA sequence:RefSeq:WP_006936864.1
PDDEXK nuclease domain-containing protein
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005567519.1
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007300393.1
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007624896.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011775218.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006372493.1
COORDINATES: similar to AA sequence:RefSeq:WP_004021918.1
This oxidoreductase belongs to a branch of the SDR family in which the NAD cofactor is especially deeply buried and is non-exchangeable. Members of this branch occur only in species that product mycofactocin, a small molecule electron carrier derived from the final two residues of the mycofactocin precursor protein, MftA. Mycofactocin is thought to mediate transfers of electrons between such non-exchangeable NAD cofactors from different enzymes acting on different substates, and has been shown to play a role in the metabolism of alcohols and aldehydes in Mycolicibacterium smegmatis and in Mycobacterium tuberculosis; Derived by automated computational analysis using gene prediction method: Protein Homology.
mycofactocin-coupled SDR family oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_005245855.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_005245785.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_005245783.1
COORDINATES: similar to AA sequence:RefSeq:WP_013677927.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_005249494.1
COORDINATES: protein motif:HMM:NF005559.1
COORDINATES: similar to AA sequence:RefSeq:WP_016884634.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245777.1
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005249488.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_007298675.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005570150.1
COORDINATES: similar to AA sequence:RefSeq:WP_005566943.1
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_005566945.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: protein motif:HMM:TIGR00369.1
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_013416558.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013873436.1
COORDINATES: similar to AA sequence:RefSeq:WP_019667747.1
4-hydroxyphenylacetate 3-hydroxylase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009076597.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018331368.1
COORDINATES: similar to AA sequence:RefSeq:WP_011873943.1
carboxyl transferase domain-containing protein
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:NF013225.2
COORDINATES: similar to AA sequence:RefSeq:WP_017199792.1
biotin carboxylase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: similar to AA sequence:RefSeq:WP_012999401.1
IclR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012312.2
COORDINATES: similar to AA sequence:RefSeq:WP_007439145.1
COORDINATES: similar to AA sequence:RefSeq:WP_020637996.1
COORDINATES: similar to AA sequence:RefSeq:WP_012253557.1
COORDINATES: similar to AA sequence:RefSeq:WP_003931396.1
COORDINATES: similar to AA sequence:RefSeq:WP_009474225.1
COORDINATES: similar to AA sequence:RefSeq:WP_005250855.1
COORDINATES: similar to AA sequence:RefSeq:WP_011727627.1
COORDINATES: similar to AA sequence:RefSeq:WP_006436988.1
COORDINATES: similar to AA sequence:RefSeq:WP_016881220.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00996.1
COORDINATES: similar to AA sequence:RefSeq:WP_013885097.1
dihydrolipoamide acetyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005184538.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_017240323.1
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_015800193.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: protein motif:HMM:NF024771.2
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: protein motif:HMM:NF024092.2
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014134656.1
GO:0008677 - 2-dehydropantoate 2-reductase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003878523.1
COORDINATES: similar to AA sequence:RefSeq:WP_007168437.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611377.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF036525.2
COORDINATES: similar to AA sequence:RefSeq:WP_009476343.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612118.1
GO:0015074 - DNA integration [Evidence IEA]
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_005444047.1
COORDINATES: similar to AA sequence:RefSeq:WP_010596091.1
COORDINATES: similar to AA sequence:RefSeq:WP_005242479.1
COORDINATES: similar to AA sequence:RefSeq:WP_018161564.1
COORDINATES: similar to AA sequence:RefSeq:WP_014711167.1
COORDINATES: similar to AA sequence:RefSeq:WP_005146820.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003923924.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006942443.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020543197.1
COORDINATES: similar to AA sequence:RefSeq:WP_006942440.1
COORDINATES: similar to AA sequence:RefSeq:WP_014384228.1
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_006942437.1
aromatic-ring-hydroxylating dioxygenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_003923919.1
COORDINATES: similar to AA sequence:RefSeq:WP_007575592.1
COORDINATES: similar to AA sequence:RefSeq:WP_020543188.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018161562.1
COORDINATES: similar to AA sequence:RefSeq:WP_005100182.1
COORDINATES: similar to AA sequence:RefSeq:WP_020497519.1
COORDINATES: similar to AA sequence:RefSeq:WP_006942423.1
COORDINATES: similar to AA sequence:RefSeq:WP_005164913.1
COORDINATES: similar to AA sequence:RefSeq:WP_018161586.1
COORDINATES: similar to AA sequence:RefSeq:WP_004023256.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245617.1
COORDINATES: similar to AA sequence:RefSeq:WP_014211772.1
COORDINATES: similar to AA sequence:RefSeq:WP_020730631.1
COORDINATES: similar to AA sequence:RefSeq:WP_004023269.1
COORDINATES: protein motif:HMM:NF025878.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024844.2
MaoC family dehydratase N-terminal domain-containing protein
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF025050.2
COORDINATES: similar to AA sequence:RefSeq:WP_011599022.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015451982.1
COORDINATES: protein motif:HMM:NF024966.2
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: protein motif:HMM:NF024260.2
COORDINATES: similar to AA sequence:RefSeq:WP_009760345.1
COORDINATES: protein motif:HMM:NF020387.2
COORDINATES: similar to AA sequence:RefSeq:WP_011069213.1
COORDINATES: similar to AA sequence:RefSeq:WP_005264933.1
COORDINATES: protein motif:HMM:NF012913.2
COORDINATES: protein motif:HMM:NF013753.2
COORDINATES: similar to AA sequence:RefSeq:WP_013470346.1
COORDINATES: protein motif:HMM:NF018479.2
COORDINATES: similar to AA sequence:RefSeq:WP_007300296.1
COORDINATES: similar to AA sequence:RefSeq:WP_005242457.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005265019.1
COORDINATES: similar to AA sequence:RefSeq:WP_011599825.1
COORDINATES: similar to AA sequence:RefSeq:WP_015292597.1
COORDINATES: similar to AA sequence:RefSeq:WP_009473034.1
COORDINATES: protein motif:HMM:NF016362.2
COORDINATES: protein motif:HMM:NF013003.2
COORDINATES: similar to AA sequence:RefSeq:WP_006935771.1
COORDINATES: protein motif:HMM:NF039405.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245523.1
COORDINATES: similar to AA sequence:RefSeq:WP_006935272.1
COORDINATES: similar to AA sequence:RefSeq:WP_005565734.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005245176.1
COORDINATES: similar to AA sequence:RefSeq:WP_020645133.1
COORDINATES: similar to AA sequence:RefSeq:WP_009475844.1
COORDINATES: similar to AA sequence:RefSeq:WP_011595737.1
COORDINATES: similar to AA sequence:RefSeq:WP_009475847.1
COORDINATES: similar to AA sequence:RefSeq:WP_014691235.1
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007297502.1
COORDINATES: similar to AA sequence:RefSeq:WP_011598757.1
COORDINATES: similar to AA sequence:RefSeq:WP_011598758.1
COORDINATES: similar to AA sequence:RefSeq:WP_011598759.1
COORDINATES: similar to AA sequence:RefSeq:WP_014988173.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014352859.1
COORDINATES: similar to AA sequence:RefSeq:WP_012890423.1
COORDINATES: protein motif:HMM:NF024793.2
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018091641.1
COORDINATES: similar to AA sequence:RefSeq:WP_006138036.1
COORDINATES: similar to AA sequence:RefSeq:WP_018091639.1
COORDINATES: similar to AA sequence:RefSeq:WP_013137712.1
COORDINATES: similar to AA sequence:RefSeq:WP_018546199.1
COORDINATES: similar to AA sequence:RefSeq:WP_006935227.1
COORDINATES: similar to AA sequence:RefSeq:WP_005264535.1
COORDINATES: similar to AA sequence:RefSeq:WP_006935230.1
COORDINATES: similar to AA sequence:RefSeq:WP_005264539.1
COORDINATES: similar to AA sequence:RefSeq:WP_006935233.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005245488.1
COORDINATES: similar to AA sequence:RefSeq:WP_008720458.1
COORDINATES: similar to AA sequence:RefSeq:WP_011598763.1
iron ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007298593.1
COORDINATES: similar to AA sequence:RefSeq:WP_005517031.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245465.1
COORDINATES: similar to AA sequence:RefSeq:WP_016879889.1
ScbR family autoregulator-binding transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_008259049.1
COORDINATES: similar to AA sequence:RefSeq:WP_007296757.1
COORDINATES: similar to AA sequence:RefSeq:WP_007297093.1
COORDINATES: similar to AA sequence:RefSeq:WP_010242801.1
COORDINATES: similar to AA sequence:RefSeq:WP_005572465.1
COORDINATES: similar to AA sequence:RefSeq:WP_011210921.1
COORDINATES: similar to AA sequence:RefSeq:WP_009472988.1
COORDINATES: similar to AA sequence:RefSeq:WP_012690108.1
COORDINATES: similar to AA sequence:RefSeq:WP_007729925.1
COORDINATES: similar to AA sequence:RefSeq:WP_016880229.1
COORDINATES: similar to AA sequence:RefSeq:WP_009480173.1
COORDINATES: similar to AA sequence:RefSeq:WP_011595469.1
COORDINATES: similar to AA sequence:RefSeq:WP_005562177.1
COORDINATES: similar to AA sequence:RefSeq:WP_015661039.1
COORDINATES: similar to AA sequence:RefSeq:WP_007734871.1
COORDINATES: similar to AA sequence:RefSeq:WP_016691221.1
COORDINATES: similar to AA sequence:RefSeq:WP_005259884.1
COORDINATES: similar to AA sequence:RefSeq:WP_009324885.1
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005259881.1
COORDINATES: similar to AA sequence:RefSeq:WP_005259872.1
COORDINATES: similar to AA sequence:RefSeq:WP_005259871.1
COORDINATES: similar to AA sequence:RefSeq:WP_005259869.1
COORDINATES: similar to AA sequence:RefSeq:WP_005259867.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245403.1
COORDINATES: similar to AA sequence:RefSeq:WP_005259863.1
COORDINATES: similar to AA sequence:RefSeq:WP_015888913.1
COORDINATES: similar to AA sequence:RefSeq:WP_005265405.1
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005245398.1
COORDINATES: similar to AA sequence:RefSeq:WP_007297767.1
COORDINATES: similar to AA sequence:RefSeq:WP_005258003.1
COORDINATES: similar to AA sequence:RefSeq:WP_007296052.1
COORDINATES: similar to AA sequence:RefSeq:WP_005258006.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245354.1
COORDINATES: similar to AA sequence:RefSeq:WP_005258011.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245386.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245385.1
COORDINATES: similar to AA sequence:RefSeq:WP_005258014.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245383.1
COORDINATES: similar to AA sequence:RefSeq:WP_005258023.1
COORDINATES: similar to AA sequence:RefSeq:WP_015749872.1
GO:0004802 - transketolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005258032.1
GO:0004801 - transaldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005258034.1
COORDINATES: similar to AA sequence:RefSeq:WP_005258036.1
COORDINATES: similar to AA sequence:RefSeq:WP_005258038.1
COORDINATES: similar to AA sequence:RefSeq:WP_005258041.1
GO:0050661 - NADP binding [Evidence IEA]; GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
NADP-dependent phosphogluconate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_005258044.1
COORDINATES: similar to AA sequence:RefSeq:WP_005258046.1
COORDINATES: similar to AA sequence:RefSeq:WP_005258047.1
COORDINATES: similar to AA sequence:RefSeq:WP_011594021.1
COORDINATES: similar to AA sequence:RefSeq:WP_005258054.1
GO:0008964 - phosphoenolpyruvate carboxylase activity [Evidence IEA]
GO:0015977 - carbon fixation [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005562613.1
COORDINATES: similar to AA sequence:RefSeq:WP_005258056.1
COORDINATES: similar to AA sequence:RefSeq:WP_005258057.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005258058.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005258059.1
COORDINATES: similar to AA sequence:RefSeq:WP_005258060.1
COORDINATES: similar to AA sequence:RefSeq:WP_005258061.1
COORDINATES: similar to AA sequence:RefSeq:WP_005258062.1
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005258064.1
COORDINATES: similar to AA sequence:RefSeq:WP_005258066.1
COORDINATES: similar to AA sequence:RefSeq:WP_005258068.1
COORDINATES: similar to AA sequence:RefSeq:WP_003934863.1
COORDINATES: similar to AA sequence:RefSeq:WP_005261551.1
COORDINATES: similar to AA sequence:RefSeq:WP_009333445.1
COORDINATES: similar to AA sequence:RefSeq:WP_005261549.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005261548.1
COORDINATES: similar to AA sequence:RefSeq:WP_005261547.1
COORDINATES: similar to AA sequence:RefSeq:WP_005261546.1
COORDINATES: similar to AA sequence:RefSeq:WP_005261533.1
COORDINATES: protein motif:HMM:NF023594.2
COORDINATES: similar to AA sequence:RefSeq:WP_011600082.1
COORDINATES: similar to AA sequence:RefSeq:WP_005310571.1
COORDINATES: similar to AA sequence:RefSeq:WP_005244253.1
COORDINATES: similar to AA sequence:RefSeq:WP_013415922.1
magnesium and cobalt transport protein CorA
COORDINATES: similar to AA sequence:RefSeq:WP_012687499.1
COORDINATES: similar to AA sequence:RefSeq:WP_005249459.1
COORDINATES: similar to AA sequence:RefSeq:WP_005262795.1
COORDINATES: similar to AA sequence:RefSeq:WP_009480329.1
COORDINATES: similar to AA sequence:RefSeq:WP_007297118.1
COORDINATES: similar to AA sequence:RefSeq:WP_016880598.1
COORDINATES: similar to AA sequence:RefSeq:WP_011212104.1
COORDINATES: similar to AA sequence:RefSeq:WP_009478375.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005245460.1
COORDINATES: similar to AA sequence:RefSeq:WP_005566058.1
COORDINATES: similar to AA sequence:RefSeq:WP_005241298.1
COORDINATES: similar to AA sequence:RefSeq:WP_020417148.1
COORDINATES: similar to AA sequence:RefSeq:WP_020419064.1
COORDINATES: similar to AA sequence:RefSeq:WP_020417145.1
COORDINATES: similar to AA sequence:RefSeq:WP_020417144.1
COORDINATES: protein motif:HMM:NF012335.2
COORDINATES: similar to AA sequence:RefSeq:WP_020417142.1
COORDINATES: similar to AA sequence:RefSeq:WP_016882391.1
COORDINATES: similar to AA sequence:RefSeq:WP_020417151.1
COORDINATES: similar to AA sequence:RefSeq:WP_020417140.1
COORDINATES: similar to AA sequence:RefSeq:WP_020417139.1
COORDINATES: similar to AA sequence:RefSeq:WP_020417138.1
COORDINATES: similar to AA sequence:RefSeq:WP_006143641.1
COORDINATES: similar to AA sequence:RefSeq:WP_020417136.1
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_020417135.1
COORDINATES: similar to AA sequence:RefSeq:WP_013154229.1
COORDINATES: similar to AA sequence:RefSeq:WP_019356497.1
COORDINATES: similar to AA sequence:RefSeq:WP_008361036.1
COORDINATES: similar to AA sequence:RefSeq:WP_015489620.1
COORDINATES: similar to AA sequence:RefSeq:WP_010314936.1
COORDINATES: similar to AA sequence:RefSeq:WP_007076910.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017838048.1
COORDINATES: similar to AA sequence:RefSeq:WP_019047243.1
COORDINATES: similar to AA sequence:RefSeq:WP_011594000.1
COORDINATES: similar to AA sequence:RefSeq:WP_014375268.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: similar to AA sequence:RefSeq:WP_005466189.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006940670.1
COORDINATES: similar to AA sequence:RefSeq:WP_020417146.1
COORDINATES: protein motif:HMM:NF027681.2
COORDINATES: similar to AA sequence:RefSeq:WP_020419060.1
COORDINATES: similar to AA sequence:RefSeq:WP_003941381.1
GO:0008746 - NAD(P)+ transhydrogenase activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_005566701.1
COORDINATES: similar to AA sequence:RefSeq:WP_005262614.1
NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011593722.1
COORDINATES: similar to AA sequence:RefSeq:WP_011600383.1
COORDINATES: similar to AA sequence:RefSeq:WP_016880252.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_005240793.1
COORDINATES: similar to AA sequence:RefSeq:WP_007295951.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245248.1
COORDINATES: similar to AA sequence:RefSeq:WP_005565733.1
COORDINATES: protein motif:HMM:NF019028.2
GO:0030261 - chromosome condensation [Evidence IEA]
histone H1-like repetitive region-containing protein
COORDINATES: protein motif:HMM:NF013561.2
COORDINATES: similar to AA sequence:RefSeq:WP_005264522.1
COORDINATES: similar to AA sequence:RefSeq:WP_012687010.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245242.1
COORDINATES: similar to AA sequence:RefSeq:WP_011600206.1
COORDINATES: similar to AA sequence:RefSeq:WP_011600208.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245238.1
COORDINATES: similar to AA sequence:RefSeq:WP_019870259.1
COORDINATES: similar to AA sequence:RefSeq:WP_009358122.1
COORDINATES: similar to AA sequence:RefSeq:WP_005266084.1
COORDINATES: similar to AA sequence:RefSeq:WP_005473509.1
COORDINATES: similar to AA sequence:RefSeq:WP_019069277.1
COORDINATES: similar to AA sequence:RefSeq:WP_010232107.1
COORDINATES: similar to AA sequence:RefSeq:WP_019812707.1
COORDINATES: protein motif:HMM:NF013053.2
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_009324825.1
COORDINATES: similar to AA sequence:RefSeq:WP_007073331.1
GO:0004411 - homogentisate 1,2-dioxygenase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006570 - tyrosine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004020217.1
COORDINATES: similar to AA sequence:RefSeq:WP_020105918.1
COORDINATES: protein motif:HMM:NF004780.0
COORDINATES: similar to AA sequence:RefSeq:WP_009957192.1
COORDINATES: similar to AA sequence:RefSeq:WP_009473133.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245193.1
COORDINATES: similar to AA sequence:RefSeq:WP_006947538.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007296543.1
COORDINATES: similar to AA sequence:RefSeq:WP_007300852.1
COORDINATES: similar to AA sequence:RefSeq:WP_011599025.1
GO:0008701 - 4-hydroxy-2-oxovalerate aldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005264158.1
GO:0008774 - acetaldehyde dehydrogenase (acetylating) activity [Evidence IEA]
acetaldehyde dehydrogenase (acetylating)
COORDINATES: similar to AA sequence:RefSeq:WP_005264157.1
COORDINATES: similar to AA sequence:RefSeq:WP_012687260.1
COORDINATES: protein motif:HMM:NF024905.2
COORDINATES: similar to AA sequence:RefSeq:WP_006938969.1
COORDINATES: similar to AA sequence:RefSeq:WP_017838639.1
COORDINATES: similar to AA sequence:RefSeq:WP_017838640.1
GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006938967.1
COORDINATES: similar to AA sequence:RefSeq:WP_006938976.1
COORDINATES: similar to AA sequence:RefSeq:WP_016880935.1
COORDINATES: similar to AA sequence:RefSeq:WP_003869930.1
COORDINATES: similar to AA sequence:RefSeq:WP_009268134.1
COORDINATES: similar to AA sequence:RefSeq:WP_011593783.1
COORDINATES: similar to AA sequence:RefSeq:WP_006938965.1
COORDINATES: similar to AA sequence:RefSeq:WP_016880934.1
COORDINATES: similar to AA sequence:RefSeq:WP_016880931.1
COORDINATES: similar to AA sequence:RefSeq:WP_009473135.1
COORDINATES: similar to AA sequence:RefSeq:WP_012317357.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013530.2
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF014899.2
COORDINATES: similar to AA sequence:RefSeq:WP_016188783.1
COORDINATES: similar to AA sequence:RefSeq:WP_005245201.1
COORDINATES: similar to AA sequence:RefSeq:NP_218193.1
COORDINATES: similar to AA sequence:RefSeq:WP_019437714.1
COORDINATES: similar to AA sequence:RefSeq:WP_006937387.1
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: similar to AA sequence:RefSeq:WP_012687049.1
COORDINATES: similar to AA sequence:RefSeq:WP_011593869.1
incomplete; too short partial abutting assembly gap; missing N-terminus; Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.