Haloterrigena turkmenica DSM 5511 plasmid pHTUR06, complete sequence.
type: Entry
definition: Haloterrigena turkmenica DSM 5511 plasmid pHTUR06, complete sequence.
sequence version: NC_013749.1
sequence date: 2022-10-28
sequence: sequence
division: CON
label: NC_013749.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02598471
keyword: RefSeq
source: Haloterrigena turkmenica DSM 5511
organism: Haloterrigena turkmenica DSM 5511
taxonomy: Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.
reference: 1
references: 21304683
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001866.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4082988\nSource DNA and organism available from Hans-Peter Klenk at the\nGerman Collection of Microorganisms and Cell Cultures (DSMZ)\n(hans-peter.klenk@dsmz.de)\nContacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)\n David Bruce (microbe@cuba.jgi-psf.org)\nWhole genome sequencing and draft assembly at JGI-PGF\nFinishing done by JGI-LANL\nAnnotation by JGI-ORNL and JGI-PGF\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Metadata-START##\nOrganism Display Name :: Haloterrigena turkmenica VKM, DSM 5511\nCulture Collection ID :: DSM 5511, VKM B-1734\nGOLD Stamp ID :: Gi02245\nGreengenes ID :: 665\nFunding Program :: DOE-GEBA 2007\nTemperature Range :: Mesophile\nGram Staining :: gram-\nBiotic Relationship :: Free living\nDiseases :: None\n##Metadata-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/28/2022 03:13:53\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 5,283\nCDSs (total) :: 5,221\nGenes (coding) :: 5,061\nCDSs (with protein) :: 5,061\nGenes (RNA) :: 62\nrRNAs :: 4, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 3, 3 (5S, 16S, 23S)\ntRNAs :: 50…

sequence
subclass of: SO_0000155
sequence length: 15815
topology: circular
so has quality: SO_0000988
location: 1..15815
location: region:1-15815:1
RO_0002162: 543526

NC_013749
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02598471
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Haloterrigena turkmenica type strain (4k)
author: Saunders, E.
author: Tindall, B.J.
author: Fahnrich, R.
author: Lapidus, A.
author: Copeland, A.
author: Del Rio, T.G.
author: Lucas, S.
author: Chen, F.
author: Tice, H.
author: Cheng, J.F.
author: Han, C.
author: Detter, J.C.
author: Bruce, D.
author: Goodwin, L.
author: Chain, P.
author: Pitluck, S.
author: Pati, A.
author: Ivanova, N.
author: Mavromatis, K.
author: Chen, A.
author: Palaniappan, K.
author: Land, M.
author: Hauser, L.
author: Chang, Y.J.
author: Jeffries, C.D.
author: Brettin, T.
author: Rohde, M.
author: Goker, M.
author: Bristow, J.
author: Eisen, J.A.
author: Markowitz, V.
author: Hugenholtz, P.
author: Klenk, H.P.
author: Kyrpides, N.C.
journal: Stand Genomic Sci
volume: 2
issue: 1
pages: 107-116
year: 2010
pubmed: 21304683
comments: Publication Status: Online-Only

21304683
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Kyrpides, N.
author: Mavromatis, K.
author: Ivanova, N.
author: Mikhailova, N.
author: Saunders, E.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Markowitz, V.
author: Cheng, J.-F.
author: Hugenholtz, P.
author: Woyke, T.
author: Wu, D.
author: Tindal, B.
author: Fahnrich, R.
author: Schneider, S.
author: Klenk, H.-P.
author: Eisen, J.A.
journal: Submitted (11-JAN-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15815:1
position: 15815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-15815:1:source
so part of: sequence
organism: Haloterrigena turkmenica DSM 5511
mol type: genomic DNA
strain: DSM 5511
type material: type strain of Halococcus turkmenicus
plasmid: pHTUR06
note: type strain of Haloterrigena turkmenica

543526
type: Taxonomy
SIO_000068: taxonomy

HTUR_RS25285
type: Gene
subclass of: SO_0000704
RO_0002162: 543526
locus tag: HTUR_RS25285
old locus tag: Htur_5266
so part of: sequence
location: complement(37..351)
location: region:37-351:-1
so has part: feature:37-351:-1:exon
subclass of: SO_0000010

8745936
type: Gene
SIO_000068: ncbigene

position:37:-1
position: 37
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351:-1
position: 351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37-351:-1:exon

HTUR_RS25285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 543526
locus tag: HTUR_RS25285
old locus tag: Htur_5266
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRPNYDSVLCRVLFKLGRDHTWGSPAPIDDFLQGGFTQQEREVAQDEIVPDIKRGQVEYIGYQNGTIWLRGDKHDEAAYFLRDNCGYEEYRIEATLSRFDGFD
SIO_010081: HTUR_RS25285
subclass of: SO_0000673
so part of: HTUR_RS25285
location: complement(37..351)
location: region:37-351:-1
so has part: feature:37-351:-1:exon

WP_012946233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37-351:-1:exon

HTUR_RS26560
type: Gene
subclass of: SO_0000704
RO_0002162: 543526
locus tag: HTUR_RS26560
old locus tag: Htur_5267
so part of: sequence
location: 474..815
location: region:474-815:1
so has part: feature:474-815:1:exon
subclass of: SO_0000010

31787772
type: Gene
SIO_000068: ncbigene

position:474:1
position: 474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815:1
position: 815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474-815:1:exon

HTUR_RS26560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 543526
locus tag: HTUR_RS26560
old locus tag: Htur_5267
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008528251.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDDKKTKEVRTEYPSAWIALTQNESVGYIIDALLDLPPHREFNKTELAEMAGVSRNSVGTHMELLLTLDLVEPVEGTTPTRYRFNSDSGVSRALVELEGEVNQAVESDKKQPA
SIO_010081: HTUR_RS26560
subclass of: SO_0000673
so part of: HTUR_RS26560
location: 474..815
location: region:474-815:1
so has part: feature:474-815:1:exon

WP_012946234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474-815:1:exon

HTUR_RS25290
type: Gene
subclass of: SO_0000704
RO_0002162: 543526
locus tag: HTUR_RS25290
old locus tag: Htur_5268
so part of: sequence
location: 865..1179
location: region:865-1179:1
so has part: feature:865-1179:1:exon
subclass of: SO_0000010

8745916
type: Gene
SIO_000068: ncbigene

position:865:1
position: 865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1179:1
position: 1179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:865-1179:1:exon

HTUR_RS25290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 543526
locus tag: HTUR_RS25290
old locus tag: Htur_5268
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLETSNPDEVDELLEEQNKLSNDIDRELKRYIDENPVFRREFELFDEPGFDRPYIQSVAFNRWTNNPDQAISTEWQAAVIYGYKQALNDIVSELPTHLEESGE
SIO_010081: HTUR_RS25290
subclass of: SO_0000673
so part of: HTUR_RS25290
location: 865..1179
location: region:865-1179:1
so has part: feature:865-1179:1:exon

WP_012946235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:865-1179:1:exon

HTUR_RS25295
type: Gene
subclass of: SO_0000704
RO_0002162: 543526
locus tag: HTUR_RS25295
old locus tag: Htur_5269
so part of: sequence
location: complement(1261..1479)
location: region:1261-1479:-1
so has part: feature:1261-1479:-1:exon
subclass of: SO_0000010

8745917
type: Gene
SIO_000068: ncbigene

position:1261:-1
position: 1261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1479:-1
position: 1479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1261-1479:-1:exon

HTUR_RS25295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 543526
locus tag: HTUR_RS25295
old locus tag: Htur_5269
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEILNWIEKWSGILLRKLLAFSALLGVIVLIFTAAQGNAAGVISFALFVAPYLMVRYRDPESTTVPFQGRVF
SIO_010081: HTUR_RS25295
subclass of: SO_0000673
so part of: HTUR_RS25295
location: complement(1261..1479)
location: region:1261-1479:-1
so has part: feature:1261-1479:-1:exon

WP_148225505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1261-1479:-1:exon

HTUR_RS25300
type: Gene
subclass of: SO_0000704
RO_0002162: 543526
locus tag: HTUR_RS25300
old locus tag: Htur_5270
so part of: sequence
location: 1803..2141
location: region:1803-2141:1
so has part: feature:1803-2141:1:exon
subclass of: SO_0000010

8745918
type: Gene
SIO_000068: ncbigene

position:1803:1
position: 1803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2141:1
position: 2141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1803-2141:1:exon

HTUR_RS25300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 543526
locus tag: HTUR_RS25300
old locus tag: Htur_5270
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAEPKSPTTSKTRKSDDEISAALEGFRPGRNAEERAARRESAHAALEWLRDQPDAVTAGDVKHALYDDHGIDGQTEQTWWTETARKAFRQAAENGYVEIDGRSYEWTGGREA
SIO_010081: HTUR_RS25300
subclass of: SO_0000673
so part of: HTUR_RS25300
location: 1803..2141
location: region:1803-2141:1
so has part: feature:1803-2141:1:exon

WP_226377597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1803-2141:1:exon

HTUR_RS26565
type: Gene
subclass of: SO_0000704
RO_0002162: 543526
locus tag: HTUR_RS26565
old locus tag: Htur_5272
so part of: sequence
location: complement(2464..5058)
location: region:2464-5058:-1
so has part: feature:2464-5058:-1:exon
subclass of: SO_0000010

31787773
type: Gene
SIO_000068: ncbigene

position:2464:-1
position: 2464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5058:-1
position: 5058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2464-5058:-1:exon

HTUR_RS26565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 543526
locus tag: HTUR_RS26565
old locus tag: Htur_5272
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGWGDAIGDAASGVAEGAKKAGGKVKKTVDETGDKVDDTVDKTADKVDDTVDKTVGKVDDTVDKTVDKVDDTVDKTTDKAKGTIGETKDKAESAFNETTDEITDTVSSVVGDAQEIKEDTSEDVDQKVDDVSENLRGKIEDAVGGVKNKADDVTDDVGNEVGIIANNVEDKAGDVTDGVSDKVDGVTDSAGNAVDDVQKGADDALRDATGGDIGVSSDWTSMEDSGGIQGTADGIGQEVKEEGREFRRKQSEEGEQFGDFDWSVGGVDLEQKAEDLQAGAQKRGLDAANSMGPSLGGVVLRETGHDALGRKYEDVVGGFAEGIVTRTASNVGGTPKAGMEAVETTAFTLTNPKETAETIPGALSASAVSTAEDFRENPAQAAGGVFGGIALGMGAGRAGLGMGRRVTRSRSSSGSRSGSGQSGGSSPTSGKPRLLTSDRNRGQLIIGRRDRDREGGSSQSDPTGSSSRDGGDSGLLPDNIDEMLEGMENAHSRRDANQRAERNIIDKHLEAGKRQERGDEPRTVTRDREPDTLTRDREPKTVSREPKTSEPTGSGFSQTLDTSVDLSPREKQLAAKIGRQTPSGDLRDLDATRRQTPDTDLRIQMDTASEGSTPAIPGLVGAGAGSDPIQEMEDLRDESESKSTDGSDVEFGDGDLFGVFMPGAQDGGRDWDLPETPGSEIVPPGIGIGSRGDSDSRGDTDTEPDTGQQPDSDSGTRIGTRPDSDSGTRIGTQPDSDTDTRTDTRTGIGPVTDTVPNPPTTDTPPERPPSDPPGLTPPPGRTPPPRDNGGGGGGRGDDGDGWRRIRTPDLDLPGRDDDDKDESWFESAGEGYTVDFVNPLSGETLETDPDDGSDSGIPGLGGML
SIO_010081: HTUR_RS26565
subclass of: SO_0000673
so part of: HTUR_RS26565
location: complement(2464..5058)
location: region:2464-5058:-1
so has part: feature:2464-5058:-1:exon

WP_012946239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2464-5058:-1:exon

HTUR_RS25325
type: Gene
subclass of: SO_0000704
RO_0002162: 543526
locus tag: HTUR_RS25325
old locus tag: Htur_5274
so part of: sequence
location: complement(5346..6767)
location: region:5346-6767:-1
so has part: feature:5346-6767:-1:exon
subclass of: SO_0000010

8745922
type: Gene
SIO_000068: ncbigene

position:5346:-1
position: 5346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6767:-1
position: 6767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5346-6767:-1:exon

HTUR_RS25325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 543526
locus tag: HTUR_RS25325
old locus tag: Htur_5274
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: glycosyl hydrolase
translation: MLAAAGGVTAVGTALSQSSQKKLGNLFGGTMGLNEAYNVSGDLWIGPDSAKGDVAAESGRVYMAVDTQVEYYGTGDSWDGMGLGSASNPVSEIHSESVSTEEAVTARHKRLGSVTTTPSYWGPDLQLDNVYQTFDSQHVKGRLIGKYYWSDPPYGTENAGVDSYDPDDGANNNGVAMDGDATPCLVADDSIFVFKDKDETNGLPVRIYRAPDYQTTFDNSGTLQYERVLDFDDGGATMIGKGGRFNYQISAHPDSGTIVVGEYNQTEGADPKLYRSTDNGQTWSVVYQETGVPDHVHSVAPDPYEPDHWIVCLGDNGEDRYLESWDDGATWSREPLGFDPKTHAVGIDYGPDYIYFAQDQGSGSYHGPWVVRREDREMFSLCSTNPRFKYRGVVDGMIELGLIHDRAHGITYIRGRDGTNGTNYVYYVDGIGGEPQMIDDAWGSPQMHPVDGYISSAQGKMYARLSPVPANKL
SIO_010081: HTUR_RS25325
subclass of: SO_0000673
so part of: HTUR_RS25325
location: complement(5346..6767)
location: region:5346-6767:-1
so has part: feature:5346-6767:-1:exon

WP_148225507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5346-6767:-1:exon

HTUR_RS25330
type: Gene
subclass of: SO_0000704
RO_0002162: 543526
locus tag: HTUR_RS25330
old locus tag: Htur_5275
so part of: sequence
location: complement(6990..10847)
location: region:6990-10847:-1
so has part: feature:6990-10847:-1:exon
subclass of: SO_0000010

8745923
type: Gene
SIO_000068: ncbigene

position:6990:-1
position: 6990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10847:-1
position: 10847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6990-10847:-1:exon

HTUR_RS25330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 543526
locus tag: HTUR_RS25330
old locus tag: Htur_5275
inference: COORDINATES: protein motif:HMM:TIGR01613.1
GO function: GO:0003896 - DNA primase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA primase family protein
translation: MSDLSPSEVRDHYRKASSVFDKLGDVANNPTLVKNDHYGWYIKRDNDNVDELEEGWTQRGRVATADDYPEIVDRISRSLYAITTYKKPDAVARERPCRYNSDDGVTEWMGDETPMPEWGDVVALPAWGDIDLADELKGERETLSAEKRETVERTLDAYIGEFAALYGGNRDAIMALDSVGGAYIFGPPEATIPIARLFKDDENASARVFEELNDRINDYLREAEQRVNDRVTGASDVITPDWVNNANRAYKAPLSIHSSHDAVVTPIDTENVEYTYTPIDAVGETTISTAVEWAEQYTAVEYTELAAELVETLWPDLYDEQSNATWKDVLEFWVEKEREREKAEQRRREKAERERAKRLQELETTVTGQDVTPHKTDVYAALDNVDTAEIVRHYACDAWGTGDSTGSNKTEFNPSWRQSTSGSSCYVDHSSNTFGDPGDGGGGYAAKAMALGEGIITDASADIRGEKWAKAVDALRSKAGENIPVWIPGKGSLKADGGEYEQTPHWAVVKAAVTLDVCDPANLEERESDDGGTYTGLPDKETYNATLDALEEHGVEHARERYVTEKRVNAGAVTWGQIRDLYSDPETPDKFARHAAVIKLCKENEYVTTRDTEEIYTYYDPDGVFERGGERDIDHTIQRELGPHYSQHEKREILGHIRARTYVDREEFNAEEIDADLVCLGNGVYDFDAGKLREHDPKYLFTQSIPWDYPENPESAECPAIEEFMDDITQREADKLTMYEFIGHALLPHYDYKAFMVLFGPGDNGKTTFYNVVEQLLGGQSNISAAEMAEIAENRFRAETVIGNYANIAAEMNARKIDDMGMIKKMTGGDTFQVEPKGKPAYEVQNTATMMFGCNEPPVLPERGRKIATRLYPIELPYEFKNDPSPNNPFEKQGRPQSELLAEITTESELQGLLVKAIEGAHRLIDRNGEFSLPETAEERMELYEQHSDPIKQFSVKCLENESGKRVAKDDVYNVYVEFCRETDAKVTSKSVFFKKLRQTTFSYSETRPRADGDGERKLYLDNATFADQAARYTDEVLFEYAETDTDTDEGSSEPLAVTDLEPGMHQEPVRAVVAEKLDAPDWLEGKGHIVDGEGAIMPYVIEGGDIFASVDEGDELVIRNVKVEEQNGVSTAVLSTITEVETASREENQDPLPSDGDKKKTAADGSGAYPEADETAETAERDDSDSDPAEHTRDGDDADTGSDAGGQALTTTELPPEDATGPLPNARRLRLILEENGDRLSKSDLYGRAADRFDMSPGNAETAVKKGCHHGILRDAGGGEIEKV
SIO_010081: HTUR_RS25330
subclass of: SO_0000673
so part of: HTUR_RS25330
location: complement(6990..10847)
location: region:6990-10847:-1
so has part: feature:6990-10847:-1:exon

WP_012946242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6990-10847:-1:exon

HTUR_RS25335
type: Gene
subclass of: SO_0000704
RO_0002162: 543526
locus tag: HTUR_RS25335
old locus tag: Htur_5277
so part of: sequence
location: complement(11484..11726)
location: region:11484-11726:-1
so has part: feature:11484-11726:-1:exon
subclass of: SO_0000010

8745925
type: Gene
SIO_000068: ncbigene

position:11484:-1
position: 11484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11726:-1
position: 11726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11484-11726:-1:exon

HTUR_RS25335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 543526
locus tag: HTUR_RS25335
old locus tag: Htur_5277
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDDLEHEVLRLLHRRYNDGKRYVKTWYIAEALDSKASTQRVGQIMADLSRDGYLEMWSNGCSSTCWRMTEQVGREVADA
SIO_010081: HTUR_RS25335
subclass of: SO_0000673
so part of: HTUR_RS25335
location: complement(11484..11726)
location: region:11484-11726:-1
so has part: feature:11484-11726:-1:exon

WP_012946244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11484-11726:-1:exon

HTUR_RS25340
type: Gene
subclass of: SO_0000704
RO_0002162: 543526
locus tag: HTUR_RS25340
old locus tag: Htur_5278
so part of: sequence
location: complement(11719..12009)
location: region:11719-12009:-1
so has part: feature:11719-12009:-1:exon
subclass of: SO_0000010

8745926
type: Gene
SIO_000068: ncbigene

position:11719:-1
position: 11719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12009:-1
position: 12009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11719-12009:-1:exon

HTUR_RS25340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 543526
locus tag: HTUR_RS25340
old locus tag: Htur_5278
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTMSSTNSSGKTSVYPHTIVSPSDHFVSVKWWDSREKYSALFERLTDDDVIALVGFERRGGEGHSFKNPSLSMVPQPVQNTIKAEGFTIAEVADNE
SIO_010081: HTUR_RS25340
subclass of: SO_0000673
so part of: HTUR_RS25340
location: complement(11719..12009)
location: region:11719-12009:-1
so has part: feature:11719-12009:-1:exon

WP_148225508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11719-12009:-1:exon

HTUR_RS25345
type: Gene
subclass of: SO_0000704
RO_0002162: 543526
locus tag: HTUR_RS25345
old locus tag: Htur_5279
so part of: sequence
location: complement(12006..12305)
location: region:12006-12305:-1
so has part: feature:12006-12305:-1:exon
subclass of: SO_0000010

8745927
type: Gene
SIO_000068: ncbigene

position:12006:-1
position: 12006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12305:-1
position: 12305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12006-12305:-1:exon

HTUR_RS25345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 543526
locus tag: HTUR_RS25345
old locus tag: Htur_5279
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTNADTPSTSAHPTKDEPTCPGQDGQEPVQDDNTDVSSNNPPTHRLPTHGIGRFLWETPADTPIGELGERYREWRNRENEGSDGDRDDTENASLEEWV
SIO_010081: HTUR_RS25345
subclass of: SO_0000673
so part of: HTUR_RS25345
location: complement(12006..12305)
location: region:12006-12305:-1
so has part: feature:12006-12305:-1:exon

WP_012946246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12006-12305:-1:exon

HTUR_RS26580
type: Gene
subclass of: SO_0000704
RO_0002162: 543526
locus tag: HTUR_RS26580
old locus tag: Htur_5281
so part of: sequence
location: 12946..13128
location: region:12946-13128:1
so has part: feature:12946-13128:1:exon
subclass of: SO_0000010

31787776
type: Gene
SIO_000068: ncbigene

position:12946:1
position: 12946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13128:1
position: 13128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12946-13128:1:exon

HTUR_RS26580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 543526
locus tag: HTUR_RS26580
old locus tag: Htur_5281
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTDYTSLGIRKETKPYFEQAKEAVATELGEEPTADQVVRELVEAYCGGDACGRWLDDGA
SIO_010081: HTUR_RS26580
subclass of: SO_0000673
so part of: HTUR_RS26580
location: 12946..13128
location: region:12946-13128:1
so has part: feature:12946-13128:1:exon

WP_012946247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12946-13128:1:exon

HTUR_RS25350
type: Gene
subclass of: SO_0000704
RO_0002162: 543526
locus tag: HTUR_RS25350
old locus tag: Htur_5282
so part of: sequence
location: 13115..13357
location: region:13115-13357:1
so has part: feature:13115-13357:1:exon
subclass of: SO_0000010

8745929
type: Gene
SIO_000068: ncbigene

position:13115:1
position: 13115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13357:1
position: 13357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13115-13357:1:exon

HTUR_RS25350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 543526
locus tag: HTUR_RS25350
old locus tag: Htur_5282
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEHSDTPPLGLAILSFASIGIVLASIAGKLFNSSQRYLGPTEPAHATASPELWKWVFTLGLPIAAVIVLWLWLGSGTRR
SIO_010081: HTUR_RS25350
subclass of: SO_0000673
so part of: HTUR_RS25350
location: 13115..13357
location: region:13115-13357:1
so has part: feature:13115-13357:1:exon

WP_012946248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13115-13357:1:exon

HTUR_RS25355
type: Gene
subclass of: SO_0000704
RO_0002162: 543526
locus tag: HTUR_RS25355
old locus tag: Htur_5283
so part of: sequence
location: 13362..13838
location: region:13362-13838:1
so has part: feature:13362-13838:1:exon
subclass of: SO_0000010

8745930
type: Gene
SIO_000068: ncbigene

position:13362:1
position: 13362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13838:1
position: 13838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13362-13838:1:exon

HTUR_RS25355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 543526
locus tag: HTUR_RS25355
old locus tag: Htur_5283
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDRDRPYRPRTTYEIKDHLQRIATTLNGQERGVGEFHEALEIVLRYIDVLEDEMTCLDCGTKLAPFQPSGRSIKGKYRCPNCHDRNEHITVWDYLGTRDMESAHLPGLPEDIELAFECDCAPETTMGSREQAQTRTARHGANTSHSKIARRDGDGRV
SIO_010081: HTUR_RS25355
subclass of: SO_0000673
so part of: HTUR_RS25355
location: 13362..13838
location: region:13362-13838:1
so has part: feature:13362-13838:1:exon

WP_012946249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13362-13838:1:exon

HTUR_RS25360
type: Gene
subclass of: SO_0000704
RO_0002162: 543526
locus tag: HTUR_RS25360
old locus tag: Htur_5284
so part of: sequence
location: complement(14187..14456)
location: region:14187-14456:-1
so has part: feature:14187-14456:-1:exon
subclass of: SO_0000010

8745931
type: Gene
SIO_000068: ncbigene

position:14187:-1
position: 14187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14456:-1
position: 14456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14187-14456:-1:exon

HTUR_RS25360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 543526
locus tag: HTUR_RS25360
old locus tag: Htur_5284
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHDRRQLEIARSLLEQDLRYDTEVSLFGFTLRASRQSPGIWTVFHDELEAPVDYVKVDATISAVNLLDHLKNLREVVETRPVTESSASP
SIO_010081: HTUR_RS25360
subclass of: SO_0000673
so part of: HTUR_RS25360
location: complement(14187..14456)
location: region:14187-14456:-1
so has part: feature:14187-14456:-1:exon

WP_012946250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14187-14456:-1:exon

HTUR_RS28525
type: Gene
subclass of: SO_0000704
RO_0002162: 543526
locus tag: HTUR_RS28525
old locus tag: Htur_5285
so part of: sequence
location: complement(14449..14571)
location: region:14449-14571:-1
so has part: feature:14449-14571:-1:exon
subclass of: SO_0000010

75736096
type: Gene
SIO_000068: ncbigene

position:14449:-1
position: 14449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14571:-1
position: 14571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14449-14571:-1:exon

HTUR_RS28525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 543526
locus tag: HTUR_RS28525
old locus tag: Htur_5285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNAHVTLQTRRTPDGVERVWRVNGRAFESGDELEEAGLNA
SIO_010081: HTUR_RS28525
subclass of: SO_0000673
so part of: HTUR_RS28525
location: complement(14449..14571)
location: region:14449-14571:-1
so has part: feature:14449-14571:-1:exon

WP_012946251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14449-14571:-1:exon

HTUR_RS25365
type: Gene
subclass of: SO_0000704
RO_0002162: 543526
locus tag: HTUR_RS25365
old locus tag: Htur_5286
so part of: sequence
location: complement(14568..14999)
location: region:14568-14999:-1
so has part: feature:14568-14999:-1:exon
subclass of: SO_0000010

8745933
type: Gene
SIO_000068: ncbigene

position:14568:-1
position: 14568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14999:-1
position: 14999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14568-14999:-1:exon

HTUR_RS25365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 543526
locus tag: HTUR_RS25365
old locus tag: Htur_5286
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSKNPCRDNGTDNSIDYEEIARRSKAVGLQETYDHHVDETIHEFLQAVEDGDETHQAYLDMCRAMFEFLQEANHDLADLGEFDYSDTENLLLVRSIDVAASTALGRLDLAAEFAVDVAEAVDEASDEDVSEAIAELEESESE
SIO_010081: HTUR_RS25365
subclass of: SO_0000673
so part of: HTUR_RS25365
location: complement(14568..14999)
location: region:14568-14999:-1
so has part: feature:14568-14999:-1:exon

WP_012946252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14568-14999:-1:exon

HTUR_RS25370
type: Gene
subclass of: SO_0000704
RO_0002162: 543526
locus tag: HTUR_RS25370
old locus tag: Htur_5287
so part of: sequence
location: 15190..15813
location: region:15190-15813:1
so has part: feature:15190-15813:1:exon
subclass of: SO_0000010

8745934
type: Gene
SIO_000068: ncbigene

position:15190:1
position: 15190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15813:1
position: 15813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15190-15813:1:exon

HTUR_RS25370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 543526
locus tag: HTUR_RS25370
old locus tag: Htur_5287
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009486653.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MPADTTDGANPDVHSRTWLKPAQVERMKDACLTEEFPTYLQDRNLAIVSLLYDTGLRASELVSLDTRHLELEDSRLLLPGSIQKGNASSASLELGKWGADSTRDLRRYLRDRWKDTDALFPSRSSDRLSRRSLQRLIGRVAEVADVEPYTEDFEQVDPSHVHPHTLRHSVAYRIIVEEEGRLEDVQMRLRHANRSTTDRIYSHYVVR
SIO_010081: HTUR_RS25370
subclass of: SO_0000673
so part of: HTUR_RS25370
location: 15190..15813
location: region:15190-15813:1
so has part: feature:15190-15813:1:exon

WP_012946253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15190-15813:1:exon