Peptoniphilus ivorii strain NCTC13079 chromosome 1, complete sequence.
Bacteria; Bacillota; Tissierellia; Tissierellales; Peptoniphilaceae; Peptoniphilus.
Submitted (18-DEC-2018) WTSI, Pathogen Informatics, Wellcome Trust Sanger Institute, CB10 1SA, United Kingdom
REFSEQ INFORMATION: The reference sequence is identical to\nLR134523.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/27/2022 00:57:42\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,584\nCDSs (total) :: 1,520\nGenes (coding) :: 1,509\nCDSs (with protein) :: 1,509\nGenes (RNA) :: 64\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 4\nPseudo Genes (total) :: 11\nCDSs (without protein) :: 11\nPseudo Genes (ambiguous residues) :: 0 of 11\nPseudo Genes (frameshifted) :: 4 of 11\nPseudo Genes (incomplete) :: 8 of 11\nPseudo Genes (internal stop) :: 2 of 11\nPseudo Genes (multiple problems) :: 3 of 11\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_006317194.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: protein motif:HMM:TIGR00663.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005399216.1
COORDINATES: protein motif:HMM:TIGR00611.1
COORDINATES: similar to AA sequence:RefSeq:WP_002835938.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_008901174.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004819634.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_005955284.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
SigB/SigF/SigG family RNA polymerase sigma factor
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF024854.2
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004812807.1
COORDINATES: similar to AA sequence:RefSeq:WP_002841439.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
Some members of this family are selenoproteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
arsenosugar biosynthesis radical SAM protein ArsS
COORDINATES: protein motif:HMM:NF024060.2
COORDINATES: protein motif:HMM:NF012398.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01488.1
COORDINATES: protein motif:HMM:NF010731.0
COORDINATES: protein motif:HMM:TIGR00369.1
COORDINATES: similar to AA sequence:RefSeq:WP_004838366.1
COORDINATES: protein motif:HMM:NF020296.2
COORDINATES: protein motif:HMM:NF012488.2
COORDINATES: similar to AA sequence:RefSeq:WP_014967480.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF024844.2
MaoC/PaaZ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004836970.1
GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid transport system II carrier protein
COORDINATES: similar to AA sequence:RefSeq:WP_015778333.1
COORDINATES: similar to AA sequence:RefSeq:WP_015536678.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: similar to AA sequence:RefSeq:WP_019108465.1
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013954.2
GO:0004040 - amidase activity [Evidence IEA]
glucosaminidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009430364.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
COORDINATES: protein motif:HMM:NF013700.2
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009221523.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585609.1
GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF000985.0
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: similar to AA sequence:RefSeq:WP_010246830.1
COORDINATES: similar to AA sequence:RefSeq:WP_008901096.1
COORDINATES: protein motif:HMM:NF019310.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF018663.2
glyoxalase/bleomycin resistance/extradiol dioxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009430600.1
COORDINATES: protein motif:HMM:NF013465.2
metal ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012235.2
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002837985.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430105.1
COORDINATES: similar to AA sequence:RefSeq:WP_005584758.1
GO:0008254 - 3'-nucleotidase activity [Evidence IEA]; GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_010245291.1
GO:0010038 - response to metal ion [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00587.1
COORDINATES: similar to AA sequence:RefSeq:WP_002838036.1
COORDINATES: similar to AA sequence:RefSeq:WP_010245853.1
COORDINATES: similar to AA sequence:RefSeq:WP_009346387.1
COORDINATES: similar to AA sequence:RefSeq:WP_009345386.1
COORDINATES: protein motif:HMM:TIGR00112.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014068.2
COORDINATES: similar to AA sequence:RefSeq:WP_019107974.1
COORDINATES: protein motif:HMM:TIGR02206.1
COORDINATES: protein motif:HMM:NF012257.2
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009221937.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0003824 - catalytic activity [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04041.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
YjjW family glycine radical enzyme activase
COORDINATES: protein motif:HMM:NF019450.2
copper amine oxidase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013323.2
COORDINATES: protein motif:HMM:NF012711.2
class I adenylate-forming enzyme family protein
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: protein motif:HMM:NF014564.2
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019108334.1
GO:0008047 - enzyme activator activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017828.2
2-hydroxyacyl-CoA dehydratase family protein
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: similar to AA sequence:RefSeq:WP_012290259.1
COORDINATES: protein motif:HMM:NF005305.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009221771.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016293394.1
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019108410.1
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005588629.1
PLP-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:TIGR01065.1
COORDINATES: protein motif:HMM:TIGR01891.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012993.2
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_009221969.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF004976.0
GO:0004412 - homoserine dehydrogenase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005399045.1
COORDINATES: similar to AA sequence:RefSeq:WP_012290201.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008901165.1
COORDINATES: similar to AA sequence:RefSeq:WP_012290203.1
COORDINATES: protein motif:HMM:NF013224.2
Lrp/AsnC family transcriptional regulator
COORDINATES: protein motif:HMM:NF014094.2
COORDINATES: protein motif:HMM:NF013647.2
V-type ATPase 116kDa subunit family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002837222.1
COORDINATES: similar to AA sequence:RefSeq:WP_004819136.1
COORDINATES: similar to AA sequence:RefSeq:WP_004819132.1
COORDINATES: similar to AA sequence:RefSeq:WP_004819130.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244453.1
COORDINATES: protein motif:HMM:NF012514.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009346102.1
alanine/glycine:cation symporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002836715.1
COORDINATES: protein motif:HMM:NF021617.2
5-bromo-4-chloroindolyl phosphate hydrolysis family protein
COORDINATES: protein motif:HMM:NF012492.2
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: protein motif:HMM:NF018914.2
COORDINATES: protein motif:HMM:NF005304.0
COORDINATES: similar to AA sequence:RefSeq:WP_009344978.1
COORDINATES: protein motif:HMM:NF024850.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012861.2
ClC family H(+)/Cl(-) exchange transporter
COORDINATES: protein motif:HMM:NF016088.2
COORDINATES: protein motif:HMM:NF015729.2
COORDINATES: similar to AA sequence:RefSeq:WP_009430291.1
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009431982.1
COORDINATES: similar to AA sequence:RefSeq:WP_004815078.1
GlsB/YeaQ/YmgE family stress response membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_009430104.1
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: protein motif:HMM:NF016413.2
COORDINATES: protein motif:HMM:NF014566.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
CPBP family glutamic-type intramembrane protease
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: protein motif:HMM:NF012382.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:NF038032.1
COORDINATES: protein motif:HMM:NF012613.2
S-layer homology domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:NF017548.2
COORDINATES: similar to AA sequence:RefSeq:WP_010242020.1
GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024084.2
COORDINATES: similar to AA sequence:RefSeq:WP_004816143.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019117090.1
COORDINATES: protein motif:HMM:NF021073.2
COORDINATES: protein motif:HMM:NF015834.2
COORDINATES: similar to AA sequence:RefSeq:WP_005584582.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014966417.1
COORDINATES: protein motif:HMM:TIGR01144.1
COORDINATES: protein motif:HMM:TIGR01145.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005584578.1
COORDINATES: similar to AA sequence:RefSeq:WP_005584577.1
COORDINATES: similar to AA sequence:RefSeq:WP_020045332.1
COORDINATES: protein motif:HMM:TIGR01216.1
COORDINATES: protein motif:HMM:TIGR04265.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025067.2
COORDINATES: protein motif:HMM:NF013346.2
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: protein motif:HMM:TIGR00096.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF020933.2
DNA double-strand break repair nuclease NurA
COORDINATES: similar to AA sequence:RefSeq:WP_009431844.1
COORDINATES: protein motif:HMM:TIGR01515.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015777799.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02092.1
glucose-1-phosphate adenylyltransferase subunit GlgD
COORDINATES: protein motif:HMM:TIGR02095.1
COORDINATES: protein motif:HMM:NF012356.2
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012803553.1
COORDINATES: similar to AA sequence:RefSeq:WP_004814536.1
COORDINATES: similar to AA sequence:RefSeq:WP_009221817.1
acyl-CoA dehydratase activase-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_019108082.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_019108079.1
COORDINATES: protein motif:HMM:NF015531.2
COORDINATES: similar to AA sequence:RefSeq:WP_019116846.1
COORDINATES: similar to AA sequence:RefSeq:WP_008900942.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107947.1
COORDINATES: protein motif:HMM:NF019201.2
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: similar to AA sequence:RefSeq:WP_010247296.1
COORDINATES: protein motif:HMM:NF033516.0
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013677.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03062.1
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: protein motif:HMM:NF024252.2
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: similar to AA sequence:RefSeq:WP_009242442.1
COORDINATES: protein motif:HMM:NF024763.2
COORDINATES: protein motif:HMM:NF037006.2
COORDINATES: protein motif:HMM:NF021471.2
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF018271.2
COORDINATES: protein motif:HMM:NF020905.2
urea carboxylase-associated family protein
COORDINATES: protein motif:HMM:NF012301.2
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_004820689.1
COORDINATES: protein motif:HMM:NF039236.1
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: protein motif:HMM:NF025432.2
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: similar to AA sequence:RefSeq:WP_014968872.1
COORDINATES: similar to AA sequence:RefSeq:WP_009222146.1
COORDINATES: protein motif:HMM:NF024141.2
COORDINATES: protein motif:HMM:NF012273.2
glutathione S-transferase family protein
COORDINATES: protein motif:HMM:NF024809.2
GO:0005515 - protein binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024135.2
COORDINATES: protein motif:HMM:NF025636.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003461039.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0050151 - oleate hydratase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013488.2
COORDINATES: protein motif:HMM:NF022896.2
COORDINATES: protein motif:HMM:NF016296.2
LytTR family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF021551.2
CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6
COORDINATES: protein motif:HMM:TIGR02578.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type III-A CRISPR-associated protein Cas10/Csm1
COORDINATES: protein motif:HMM:NF015695.2
type III-A CRISPR-associated protein Csm2
COORDINATES: protein motif:HMM:TIGR02582.1
type III-A CRISPR-associated RAMP protein Csm3
COORDINATES: protein motif:HMM:TIGR01903.1
type III-A CRISPR-associated RAMP protein Csm4
COORDINATES: protein motif:HMM:NF015728.2
type III-A CRISPR-associated RAMP protein Csm5
COORDINATES: protein motif:HMM:TIGR00287.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01573.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021196.2
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: similar to AA sequence:RefSeq:WP_003031323.1
COORDINATES: protein motif:HMM:NF024741.2
COORDINATES: similar to AA sequence:RefSeq:WP_010242938.1
COORDINATES: protein motif:HMM:NF002759.0
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019118496.1
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: similar to AA sequence:RefSeq:WP_002837997.1
COORDINATES: similar to AA sequence:RefSeq:WP_009222630.1
COORDINATES: similar to AA sequence:RefSeq:WP_005955932.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004820910.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018508.2
COORDINATES: similar to AA sequence:RefSeq:WP_004828276.1
COORDINATES: protein motif:HMM:NF025112.2
COORDINATES: similar to AA sequence:RefSeq:WP_009430056.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00762.1
COORDINATES: similar to AA sequence:RefSeq:WP_004269603.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006315433.1
COORDINATES: similar to AA sequence:RefSeq:WP_004832325.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: protein motif:HMM:NF016120.2
COORDINATES: protein motif:HMM:NF013895.2
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00380
The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_004821246.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
3-phosphoserine/phosphohydroxythreonine transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_004821250.1
COORDINATES: protein motif:HMM:NF018004.2
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: similar to AA sequence:RefSeq:WP_009345402.1
COORDINATES: protein motif:HMM:NF016119.2
COORDINATES: protein motif:HMM:NF021909.2
GO:0007155 - cell adhesion [Evidence IEA]
fibrinogen-binding adhesin SdrG C-terminal domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: similar to AA sequence:RefSeq:WP_015777983.1
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005399283.1
COORDINATES: similar to AA sequence:RefSeq:WP_002837631.1
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: similar to AA sequence:RefSeq:WP_005956114.1
COORDINATES: protein motif:HMM:TIGR01250.1
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009431077.1
secondary thiamine-phosphate synthase enzyme YjbQ
phosphate ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_002835811.1
phosphate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF022188.2
Rossmann-like and DUF2520 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014968715.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010248011.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF040898.1
LDCC motif putative metal-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010245886.1
COORDINATES: similar to AA sequence:RefSeq:WP_008902620.1
COORDINATES: protein motif:HMM:NF013166.2
COORDINATES: protein motif:HMM:NF016763.2
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: protein motif:HMM:NF016816.2
COORDINATES: similar to AA sequence:RefSeq:WP_006312679.1
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: similar to AA sequence:RefSeq:WP_002318736.1
COORDINATES: similar to AA sequence:RefSeq:WP_009221803.1
COORDINATES: similar to AA sequence:RefSeq:WP_009346182.1
COORDINATES: protein motif:HMM:NF014171.2
TrkA C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006784935.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: similar to AA sequence:RefSeq:WP_019107627.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF013607.2
low molecular weight protein arginine phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_002840586.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002883819.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005584593.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430867.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: protein motif:HMM:NF012970.2
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: protein motif:HMM:NF015159.2
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF014635.2
COORDINATES: similar to AA sequence:RefSeq:WP_010245169.1
GO:0008959 - phosphate acetyltransferase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00268.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
ATP-dependent sacrificial sulfur transferase LarE
COORDINATES: protein motif:HMM:NF014072.2
nickel pincer cofactor biosynthesis protein LarC
COORDINATES: similar to AA sequence:RefSeq:WP_005582569.1
COORDINATES: similar to AA sequence:RefSeq:WP_002838677.1
cytidine/deoxycytidylate deaminase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009431117.1
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
large conductance mechanosensitive channel protein MscL
COORDINATES: protein motif:HMM:NF013862.2
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:NF019142.2
GO:0019867 - outer membrane [Evidence IEA]
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0009254 - peptidoglycan turnover [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012291006.1
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: protein motif:HMM:NF017853.2
COORDINATES: protein motif:HMM:TIGR04481.1
proline reductase-associated electron transfer protein PrdC
COORDINATES: protein motif:HMM:NF020896.2
glycine/sarcosine/betaine reductase component B subunit
COORDINATES: protein motif:HMM:TIGR04480.1
GO:0050002 - D-proline reductase (dithiol) activity [Evidence IEA]
D-proline reductase (dithiol) proprotein PrdA
CBO2463/CBO2479 domain-containing protein
COORDINATES: protein motif:HMM:TIGR04483.1
D-proline reductase (dithiol) protein PrdB
COORDINATES: protein motif:HMM:TIGR00475.1
GO:0001514 - selenocysteine incorporation [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
selenocysteine-specific translation elongation factor
COORDINATES: protein motif:HMM:TIGR00474.1
GO:0004125 - L-seryl-tRNASec selenium transferase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF040786.1
selenium metabolism-associated LysR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011861888.1
COORDINATES: protein motif:HMM:TIGR04482.1
COORDINATES: protein motif:HMM:NF010576.0
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004820276.1
sulfurtransferase-like selenium metabolism protein YedF
COORDINATES: similar to AA sequence:RefSeq:WP_009221489.1
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO:0001887 - selenium compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00768.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013939.2
COORDINATES: similar to AA sequence:RefSeq:WP_009431430.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004820089.1
COORDINATES: similar to AA sequence:RefSeq:WP_019034132.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012290321.1
COORDINATES: similar to AA sequence:RefSeq:WP_008901466.1
COORDINATES: similar to AA sequence:RefSeq:WP_004269620.1
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00589.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002840880.1
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: protein motif:HMM:TIGR00706.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF021434.2
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: protein motif:HMM:TIGR01297.1
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF017655.2
COORDINATES: similar to AA sequence:RefSeq:WP_019107736.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_004837792.1
COORDINATES: similar to AA sequence:RefSeq:WP_002347701.1
COORDINATES: protein motif:HMM:NF013799.2
COORDINATES: protein motif:HMM:TIGR01641.1
GO:0044423 - virion component [Evidence IEA]
GO:0016032 - viral process [Evidence IEA]; GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF014912.2
COORDINATES: similar to AA sequence:RefSeq:WP_006305281.1
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006305284.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008901674.1
3-methyl-2-oxobutanoate dehydrogenase subunit VorB
COORDINATES: similar to AA sequence:RefSeq:WP_005583263.1
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: similar to AA sequence:RefSeq:WP_004839231.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF012832.2
COORDINATES: similar to AA sequence:RefSeq:WP_009221908.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012290631.1
COORDINATES: similar to AA sequence:RefSeq:WP_004834192.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009430280.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_014967243.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: similar to AA sequence:RefSeq:WP_010244886.1
COORDINATES: similar to AA sequence:RefSeq:WP_004825977.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009431507.1
COORDINATES: similar to AA sequence:RefSeq:WP_005955119.1
COORDINATES: similar to AA sequence:RefSeq:WP_008900980.1
COORDINATES: similar to AA sequence:RefSeq:WP_005955063.1
COORDINATES: similar to AA sequence:RefSeq:WP_010245829.1
COORDINATES: similar to AA sequence:RefSeq:WP_019108477.1
gamma-glutamyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009431929.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005585166.1
COORDINATES: similar to AA sequence:RefSeq:WP_004825742.1
COORDINATES: protein motif:HMM:NF014232.2
COORDINATES: protein motif:HMM:NF012443.2
COORDINATES: similar to AA sequence:RefSeq:WP_010242218.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005588602.1
COORDINATES: protein motif:HMM:NF039825.1
COORDINATES: similar to AA sequence:RefSeq:WP_002837265.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014967223.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: protein motif:HMM:NF024247.2
4Fe-4S double cluster binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009222683.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016202.2
COORDINATES: similar to AA sequence:RefSeq:WP_009431296.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0032549 - ribonucleoside binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_009431761.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit beta'
COORDINATES: protein motif:HMM:NF014669.2
GO:0015225 - biotin transmembrane transporter activity [Evidence IEA]
GO:0015878 - biotin transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019107539.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010244945.1
COORDINATES: similar to AA sequence:RefSeq:WP_009344724.1
COORDINATES: protein motif:HMM:TIGR00350.1
COORDINATES: protein motif:HMM:NF025895.2
COORDINATES: protein motif:HMM:NF015056.2
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009222527.1
COORDINATES: similar to AA sequence:RefSeq:WP_009222526.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009431936.1
COORDINATES: protein motif:HMM:NF016424.2
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF014477.2
GO:0017013 - protein flavinylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005397146.1
COORDINATES: similar to AA sequence:RefSeq:WP_009431958.1
COORDINATES: similar to AA sequence:RefSeq:WP_004823123.1
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004817153.1
COORDINATES: similar to AA sequence:RefSeq:WP_004825858.1
COORDINATES: similar to AA sequence:RefSeq:WP_002838975.1
COORDINATES: protein motif:HMM:TIGR02937.1
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF013691.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR00326.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: similar to AA sequence:RefSeq:WP_004821464.1
COORDINATES: similar to AA sequence:RefSeq:WP_004821466.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
COORDINATES: similar to AA sequence:RefSeq:WP_009430479.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019108171.1
COORDINATES: similar to AA sequence:RefSeq:WP_019116852.1
COORDINATES: protein motif:HMM:NF013543.2
COORDINATES: protein motif:HMM:NF013982.2
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: similar to AA sequence:RefSeq:WP_004821157.1
COORDINATES: protein motif:HMM:NF025865.2
COORDINATES: protein motif:HMM:TIGR01512.1
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: similar to AA sequence:RefSeq:WP_002839396.1
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005956751.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: protein motif:HMM:NF020784.2
GO:0008270 - zinc ion binding [Evidence IEA]
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015777460.1
COORDINATES: similar to AA sequence:RefSeq:WP_004824241.1
COORDINATES: similar to AA sequence:RefSeq:WP_009372343.1
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: similar to AA sequence:RefSeq:WP_009354735.1
COORDINATES: similar to AA sequence:RefSeq:WP_004825598.1
COORDINATES: similar to AA sequence:RefSeq:WP_019034838.1
COORDINATES: similar to AA sequence:RefSeq:WP_004822393.1
COORDINATES: similar to AA sequence:RefSeq:WP_004822391.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582072.1
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: similar to AA sequence:RefSeq:WP_009345528.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009222399.1
COORDINATES: similar to AA sequence:RefSeq:WP_004822831.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010247465.1
COORDINATES: similar to AA sequence:RefSeq:WP_004838956.1
COORDINATES: protein motif:HMM:TIGR00035.1
GO:0047689 - aspartate racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: similar to AA sequence:RefSeq:WP_004816009.1
COORDINATES: protein motif:HMM:NF015444.2
COORDINATES: protein motif:HMM:TIGR03959.1
COORDINATES: protein motif:HMM:TIGR03956.1
[FeFe] hydrogenase H-cluster radical SAM maturase HydE
COORDINATES: similar to AA sequence:RefSeq:WP_019034972.1
[FeFe] hydrogenase H-cluster radical SAM maturase HydG
COORDINATES: similar to AA sequence:RefSeq:WP_004821435.1
COORDINATES: similar to AA sequence:RefSeq:WP_006313883.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0006048 - UDP-N-acetylglucosamine biosynthetic process [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: similar to AA sequence:RefSeq:WP_019034231.1
COORDINATES: similar to AA sequence:RefSeq:WP_002838565.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019107747.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025010.2
COORDINATES: protein motif:HMM:NF012799.2
MazG nucleotide pyrophosphohydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004824786.1
COORDINATES: similar to AA sequence:RefSeq:WP_006313898.1
RNA-binding S4 domain-containing protein
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009430048.1
GO:0003676 - nucleic acid binding [Evidence IEA]
S1 RNA-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006680773.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009431738.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002586618.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587837.1
COORDINATES: similar to AA sequence:RefSeq:WP_015777318.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019966.2
COORDINATES: similar to AA sequence:RefSeq:WP_009431746.1
GO:0070403 - NAD+ binding [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009222087.1
COORDINATES: similar to AA sequence:RefSeq:WP_006309557.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: similar to AA sequence:RefSeq:WP_004832821.1
COORDINATES: protein motif:HMM:NF000824.0
GO:0004459 - L-lactate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008901678.1
COORDINATES: protein motif:HMM:NF013078.2
zinc dependent phospholipase C family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004826107.1
GO:0004355 - glutamate synthase (NADPH) activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00260.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00191.1
GO:0004413 - homoserine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00361.1
GO:0005215 - transporter activity [Evidence IEA]
GO:0009290 - DNA import into cell involved in transformation [Evidence IEA]
DNA internalization-related competence protein ComEC/Rec2
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: similar to AA sequence:RefSeq:WP_009448813.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009222336.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009222337.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00331.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: protein motif:HMM:NF010738.0
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005957554.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019034750.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: protein motif:HMM:NF018076.2
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
50S ribosomal protein L11 methyltransferase
COORDINATES: protein motif:HMM:TIGR00046.1
COORDINATES: similar to AA sequence:RefSeq:WP_009222329.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: similar to AA sequence:RefSeq:WP_019117533.1
histidine triad nucleotide-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002836438.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244803.1
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: similar to AA sequence:RefSeq:WP_009222324.1
flotillin-like protein involved in membrane lipid rafts; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019106984.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587670.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010244786.1
GO:0016301 - kinase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009222319.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004821861.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00613.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019106990.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019034399.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244770.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244767.1
pyruvate, water dikinase regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_008901846.1
GO:0016793 - triphosphoric monoester hydrolase activity [Evidence IEA]
deoxyguanosinetriphosphate triphosphohydrolase
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008901848.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016689.2
COORDINATES: protein motif:HMM:TIGR00486.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:NF021127.2
COORDINATES: similar to AA sequence:RefSeq:WP_005582828.1
COORDINATES: similar to AA sequence:RefSeq:WP_004820637.1
COORDINATES: similar to AA sequence:RefSeq:WP_004820635.1
COORDINATES: similar to AA sequence:RefSeq:WP_004820634.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430658.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: protein motif:HMM:NF024637.2
COORDINATES: similar to AA sequence:RefSeq:WP_010245644.1
COORDINATES: protein motif:HMM:NF004046.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006313803.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_008902582.1
COORDINATES: protein motif:HMM:NF022112.2
COORDINATES: similar to AA sequence:RefSeq:WP_009345636.1
COORDINATES: protein motif:HMM:NF014499.2
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02093.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: similar to AA sequence:RefSeq:WP_004821106.1
COORDINATES: protein motif:HMM:NF016875.2
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:NF017885.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF016988.2
COORDINATES: protein motif:HMM:NF015461.2
COORDINATES: similar to AA sequence:RefSeq:WP_002840703.1
COORDINATES: protein motif:HMM:TIGR02385.1
COORDINATES: similar to AA sequence:RefSeq:WP_004823983.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010243034.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012706.2
peptide ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013225.2
carboxyl transferase domain-containing protein
COORDINATES: protein motif:HMM:NF012584.2
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010247468.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009221924.1
RnfABCDGE type electron transport complex subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_009221925.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
RnfABCDGE type electron transport complex subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_010247475.1
COORDINATES: similar to AA sequence:RefSeq:WP_004832819.1
COORDINATES: similar to AA sequence:RefSeq:WP_010247481.1
COORDINATES: protein motif:HMM:NF018685.2
COORDINATES: similar to AA sequence:RefSeq:WP_005956033.1
COORDINATES: protein motif:HMM:TIGR00172.1
COORDINATES: protein motif:HMM:TIGR00608.1
COORDINATES: protein motif:HMM:NF016011.2
COORDINATES: protein motif:HMM:NF015662.2
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009431595.1
GO:0008152 - metabolic process [Evidence IEA]
TIGR03960 family B12-binding radical SAM protein
COORDINATES: protein motif:HMM:TIGR03936.1
TIGR03936 family radical SAM-associated protein
COORDINATES: protein motif:HMM:NF021653.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00559
ribosomal protein L21 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_009430358.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF016233.2
ribosomal-processing cysteine protease Prp
COORDINATES: similar to AA sequence:RefSeq:WP_004825429.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107664.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005956645.1
ribosome assembly RNA-binding protein YhbY
COORDINATES: similar to AA sequence:RefSeq:WP_005956611.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nicotinate-nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:TIGR00488.1
bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK
COORDINATES: similar to AA sequence:RefSeq:WP_009222366.1
COORDINATES: similar to AA sequence:RefSeq:WP_008902695.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004828359.1
COORDINATES: protein motif:HMM:NF024245.2
COORDINATES: similar to AA sequence:RefSeq:WP_009345922.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009430901.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002838844.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_009354737.1
COORDINATES: similar to AA sequence:RefSeq:WP_019116534.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010245977.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_002838107.1
COORDINATES: similar to AA sequence:RefSeq:WP_009345736.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:TIGR02135.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_004826166.1
COORDINATES: similar to AA sequence:RefSeq:WP_009431819.1
COORDINATES: similar to AA sequence:RefSeq:WP_009222111.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430926.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0009374 - biotin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004736 - pyruvate carboxylase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00380.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: protein motif:HMM:NF017944.2
GO:0016852 - sirohydrochlorin cobaltochelatase activity [Evidence IEA]
GO:0019251 - anaerobic cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009430299.1
COORDINATES: protein motif:HMM:TIGR00312.2
cobalt-precorrin-5B (C(1))-methyltransferase CbiD
COORDINATES: protein motif:HMM:TIGR02467.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
COORDINATES: protein motif:HMM:TIGR02469.1
precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT
COORDINATES: similar to AA sequence:RefSeq:WP_005584657.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014006.2
COORDINATES: similar to AA sequence:RefSeq:WP_014968600.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014613.2
GO:0016994 - precorrin-6A reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015997.2
cysteine-rich small domain-containing protein
COORDINATES: protein motif:HMM:NF000996.0
GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
COORDINATES: protein motif:HMM:NF004469.0
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: protein motif:HMM:TIGR00317.1
GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009222276.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:NF024545.2
COORDINATES: protein motif:HMM:NF016488.2
COORDINATES: similar to AA sequence:RefSeq:WP_005582330.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_019107014.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107015.1
COORDINATES: protein motif:HMM:TIGR01212.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005957675.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430255.1
COORDINATES: protein motif:HMM:NF016354.2
COORDINATES: similar to AA sequence:RefSeq:WP_009346098.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00023.1
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_009430018.1
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0047952 - glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0046168 - glycerol-3-phosphate catabolic process [Evidence IEA]
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF024112.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005956485.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_009346101.1
COORDINATES: protein motif:HMM:NF037631.2
COORDINATES: protein motif:HMM:TIGR00077.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00005.1
COORDINATES: similar to AA sequence:RefSeq:WP_005589045.1
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR
COORDINATES: protein motif:HMM:NF013232.2
MTAP family purine nucleoside phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_009222561.1
s-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: protein motif:HMM:NF024423.2
COORDINATES: similar to AA sequence:RefSeq:WP_009430426.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107703.1
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: protein motif:HMM:NF019887.2
COORDINATES: similar to AA sequence:RefSeq:WP_019034675.1
COORDINATES: similar to AA sequence:RefSeq:WP_009431912.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015721.2
Asp23/Gls24 family envelope stress response protein
COORDINATES: protein motif:HMM:TIGR01951.1
transcription antitermination factor NusB
COORDINATES: protein motif:HMM:TIGR00237.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01280.1
COORDINATES: protein motif:HMM:NF012568.2
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014967535.1
COORDINATES: protein motif:HMM:TIGR00634.1
COORDINATES: similar to AA sequence:RefSeq:WP_005956000.1
COORDINATES: similar to AA sequence:RefSeq:WP_008902298.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009222000.1
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019034513.1
COORDINATES: protein motif:HMM:NF014654.2
COORDINATES: protein motif:HMM:TIGR00281.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00093.1
COORDINATES: protein motif:HMM:NF018645.2
COORDINATES: similar to AA sequence:RefSeq:WP_009430230.1
COORDINATES: similar to AA sequence:RefSeq:WP_009431142.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019106928.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008902288.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0050992 - dimethylallyl diphosphate biosynthetic process [Evidence IEA]; GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1
COORDINATES: protein motif:HMM:NF036410.2
COORDINATES: similar to AA sequence:RefSeq:WP_009432030.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019561.2
COORDINATES: similar to AA sequence:RefSeq:WP_004834307.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004834470.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: similar to AA sequence:RefSeq:WP_009432011.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019107153.1
COORDINATES: protein motif:HMM:NF017633.2
NFACT RNA binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00255.1
COORDINATES: similar to AA sequence:RefSeq:WP_009344722.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009431314.1
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_004821338.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: protein motif:HMM:TIGR00595.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008902686.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00460.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019107341.1
COORDINATES: protein motif:HMM:TIGR00563.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: similar to AA sequence:RefSeq:WP_004824064.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: similar to AA sequence:RefSeq:WP_009345976.1
GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]
Stp1/IreP family PP2C-type Ser/Thr phosphatase
COORDINATES: protein motif:HMM:NF033483.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
Stk1 family PASTA domain-containing Ser/Thr kinase
COORDINATES: similar to AA sequence:RefSeq:WP_009222141.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_009431267.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005957269.1
COORDINATES: similar to AA sequence:RefSeq:WP_004821237.1
COORDINATES: similar to AA sequence:RefSeq:WP_004822875.1
COORDINATES: similar to AA sequence:RefSeq:WP_004822872.1
COORDINATES: protein motif:HMM:NF008168.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00095.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_004824156.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009430098.1
COORDINATES: protein motif:HMM:NF017452.2
COORDINATES: similar to AA sequence:RefSeq:WP_005957575.1
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_010245509.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430641.1
COORDINATES: similar to AA sequence:RefSeq:WP_019034557.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107181.1
COORDINATES: similar to AA sequence:RefSeq:WP_009222201.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014967712.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004821590.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_010242407.1
COORDINATES: similar to AA sequence:RefSeq:WP_004828438.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: protein motif:HMM:NF001688.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014617.2
COORDINATES: similar to AA sequence:RefSeq:WP_019034563.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004821570.1
COORDINATES: similar to AA sequence:RefSeq:WP_019034564.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009431859.1
GO:0019843 - rRNA binding [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF013528.2
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004162.0
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_010242395.1
COORDINATES: similar to AA sequence:RefSeq:WP_009372297.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002841986.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004823976.1
COORDINATES: similar to AA sequence:RefSeq:WP_005956510.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: similar to AA sequence:RefSeq:WP_019117199.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF001813.0
COORDINATES: similar to AA sequence:RefSeq:WP_008902356.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005956462.1
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: similar to AA sequence:RefSeq:WP_010242372.1
COORDINATES: similar to AA sequence:RefSeq:WP_004824068.1
COORDINATES: similar to AA sequence:RefSeq:WP_004823933.1
COORDINATES: protein motif:HMM:NF013630.2
COORDINATES: similar to AA sequence:RefSeq:WP_004824001.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009431328.1
COORDINATES: protein motif:HMM:TIGR00174.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:TIGR00585.2
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01070.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008902480.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_002842434.1
COORDINATES: similar to AA sequence:RefSeq:WP_009222284.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03534.1
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002836834.1
COORDINATES: similar to AA sequence:RefSeq:WP_010242421.1
COORDINATES: similar to AA sequence:RefSeq:WP_005956561.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006305132.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006305131.1
class II fructose-1,6-bisphosphate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_005584089.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_004821391.1
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: protein motif:HMM:NF013100.2
COORDINATES: similar to AA sequence:RefSeq:WP_010242429.1
FtsW/RodA/SpoVE family cell cycle protein
COORDINATES: similar to AA sequence:RefSeq:WP_019107195.1
COORDINATES: protein motif:HMM:NF014668.2
GO:0006282 - regulation of DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000377063.1
COORDINATES: protein motif:HMM:NF024230.2
threonine/serine exporter family protein
COORDINATES: protein motif:HMM:NF018448.2
COORDINATES: protein motif:HMM:NF016160.2
SoxR reducing system RseC family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005956729.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF019850.2
COORDINATES: protein motif:HMM:TIGR03994.1
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_004838772.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583287.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:WP_008902502.1
GO:0031179 - peptide modification [Evidence IEA]
thioether cross-link-forming SCIFF peptide maturase
COORDINATES: similar to AA sequence:RefSeq:WP_009431221.1
COORDINATES: similar to AA sequence:RefSeq:WP_009222183.1
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004821641.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004833005.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: protein motif:HMM:TIGR02669.1
COORDINATES: similar to AA sequence:RefSeq:WP_004821649.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:NF001040.0
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_009372675.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_005956733.1
GO:0004071 - aspartate-ammonia ligase activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004821659.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967763.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107105.1
GO:0009019 - tRNA (guanine-N1-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: protein motif:HMM:TIGR02273.1
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024483.2
COORDINATES: similar to AA sequence:RefSeq:WP_002835329.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009448572.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016205.2
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009430507.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009345924.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:TIGR02168.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015983.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025973.2
ribonuclease III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005956798.1
GO:0000036 - acyl carrier activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00182.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019106979.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: protein motif:HMM:NF013670.2
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014788.2
COORDINATES: protein motif:HMM:NF018460.2
COORDINATES: similar to AA sequence:RefSeq:WP_005955975.1
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: similar to AA sequence:RefSeq:WP_005587787.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004837323.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_019107699.1
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009221990.1
COORDINATES: similar to AA sequence:RefSeq:WP_002838657.1
COORDINATES: protein motif:HMM:NF019575.2
COORDINATES: protein motif:HMM:TIGR02532.1
COORDINATES: protein motif:HMM:NF024863.2
GDSL-type esterase/lipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009431331.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005957297.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: similar to AA sequence:RefSeq:WP_005582113.1
GO:0015379 - potassium:chloride symporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009345268.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002836329.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244164.1
COORDINATES: similar to AA sequence:RefSeq:WP_008902515.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009222375.1
COORDINATES: protein motif:HMM:NF013742.2
COORDINATES: similar to AA sequence:RefSeq:WP_004825412.1
COORDINATES: similar to AA sequence:RefSeq:WP_009431881.1
COORDINATES: protein motif:HMM:NF018633.2
COORDINATES: similar to AA sequence:RefSeq:WP_002838292.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430363.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587899.1
COORDINATES: similar to AA sequence:RefSeq:WP_008902328.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008902331.1
COORDINATES: similar to AA sequence:RefSeq:WP_004815131.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012290525.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019034795.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_009222123.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006308846.1
COORDINATES: protein motif:HMM:NF020067.2
FtsQ-type POTRA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008902034.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: protein motif:HMM:NF013279.2
putative peptidoglycan glycosyltransferase FtsW
COORDINATES: protein motif:HMM:TIGR01087.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_009222117.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: similar to AA sequence:RefSeq:WP_005585905.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_012290515.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_005956399.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_008902221.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01906.1
COORDINATES: similar to AA sequence:RefSeq:WP_008902220.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014967194.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00257.1
COORDINATES: protein motif:HMM:TIGR03156.1
transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:NF014881.2
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_009222309.1
COORDINATES: similar to AA sequence:RefSeq:WP_004821148.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00313.1
COORDINATES: protein motif:HMM:TIGR00379.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00230.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009431837.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_009431260.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_004821898.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_002841496.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009222518.1
COORDINATES: similar to AA sequence:RefSeq:WP_008902558.1
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: protein motif:HMM:TIGR01470.1
COORDINATES: protein motif:HMM:TIGR00212.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004790.0
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: protein motif:HMM:NF039470.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107375.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014038.2
COORDINATES: similar to AA sequence:RefSeq:WP_009222059.1
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: similar to AA sequence:RefSeq:WP_004819042.1
COORDINATES: protein motif:HMM:NF014877.2
COORDINATES: similar to AA sequence:RefSeq:WP_019107384.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]
GO:0043039 - tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004836056.1
COORDINATES: similar to AA sequence:RefSeq:WP_004824344.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01069.1
GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013316.2
COORDINATES: protein motif:HMM:NF017016.2
COORDINATES: similar to AA sequence:RefSeq:WP_009222074.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010243033.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: protein motif:HMM:NF001033.0
GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: similar to AA sequence:RefSeq:WP_019034416.1
Sir2 family NAD-dependent protein deacetylase
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009448192.1
COORDINATES: protein motif:HMM:NF025635.2
COORDINATES: protein motif:HMM:NF021542.2
COORDINATES: protein motif:HMM:NF033218.1
alkaline shock response membrane anchor protein AmaP
COORDINATES: similar to AA sequence:RefSeq:WP_009222648.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00230
T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_004826341.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009430327.1
COORDINATES: similar to AA sequence:RefSeq:WP_002837359.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005955913.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004825014.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009430682.1
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004824260.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008901648.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019034612.1
COORDINATES: similar to AA sequence:RefSeq:WP_004824929.1
COORDINATES: protein motif:HMM:NF038347.1
permease-like cell division protein FtsX
COORDINATES: similar to AA sequence:RefSeq:WP_008902630.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF033503.1
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
nickel pincer cofactor biosynthesis protein LarB
COORDINATES: similar to AA sequence:RefSeq:WP_004819151.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF012790.2
COORDINATES: protein motif:HMM:TIGR04282.1
GO:0016740 - transferase activity [Evidence IEA]
TIGR04282 family arsenosugar biosynthesis glycosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002839735.1
COORDINATES: similar to AA sequence:RefSeq:WP_004819828.1
TIGR04283 family arsenosugar biosynthesis glycosyltransferase
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: protein motif:HMM:TIGR01909.1
COORDINATES: protein motif:HMM:NF016121.2
COORDINATES: similar to AA sequence:RefSeq:WP_004833171.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019108055.1
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: protein motif:HMM:NF016145.2
GO:0046919 - pyruvyltransferase activity [Evidence IEA]
GO:0042545 - cell wall modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: protein motif:HMM:NF025582.2
COORDINATES: similar to AA sequence:RefSeq:WP_002835111.1
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009345437.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014968450.1
COORDINATES: similar to AA sequence:RefSeq:WP_004822653.1
COORDINATES: protein motif:HMM:NF012562.2
COORDINATES: protein motif:HMM:NF018884.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008901045.1
class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009221466.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: protein motif:HMM:NF024703.2
helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006307309.1
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
signal recognition particle sRNA large type
COORDINATES: nucleotide motif:Rfam:14.4:RF01854
COORDINATES: protein motif:HMM:TIGR00154.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_004825835.1
GO:0009166 - nucleotide catabolic process [Evidence IEA]
5'-nucleotidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005584525.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: protein motif:HMM:NF024183.2
COORDINATES: similar to AA sequence:RefSeq:WP_004836994.1
COORDINATES: similar to AA sequence:RefSeq:WP_008901539.1
COORDINATES: protein motif:HMM:NF017967.2
COORDINATES: similar to AA sequence:RefSeq:WP_009431259.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430383.1
COORDINATES: similar to AA sequence:RefSeq:WP_009221532.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_008901073.1
GO:0043822 - ribonuclease M5 activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019108322.1
COORDINATES: similar to AA sequence:RefSeq:WP_009345744.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF040187.1
COORDINATES: similar to AA sequence:RefSeq:WP_009431944.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: protein motif:HMM:NF023251.2
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: protein motif:HMM:NF020928.2
Tex-like N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008901812.1
GO:0003747 - translation release factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009430168.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002835420.1
COORDINATES: protein motif:HMM:NF013117.2
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: protein motif:HMM:TIGR00067.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012745.2
bifunctional glycosyltransferase family 2/GtrA family protein
COORDINATES: protein motif:HMM:NF014615.2
homocysteine S-methyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009221800.1
N-terminal region resembles flavodoxins. C-terminal ferrodoxin region binds two 4Fe-4S clusters; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013444.2
COORDINATES: similar to AA sequence:RefSeq:WP_009345829.1
COORDINATES: similar to AA sequence:RefSeq:WP_004826974.1
COORDINATES: similar to AA sequence:RefSeq:WP_004825081.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019035001.1
COORDINATES: similar to AA sequence:RefSeq:WP_002835822.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107093.1
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: protein motif:HMM:NF014414.2
cyclopropane-fatty-acyl-phospholipid synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005586975.1
COORDINATES: similar to AA sequence:RefSeq:WP_010245994.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004822359.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: protein motif:HMM:NF014844.2
COORDINATES: protein motif:HMM:NF009828.0
COORDINATES: similar to AA sequence:RefSeq:WP_004829415.1
COORDINATES: similar to AA sequence:RefSeq:WP_019035168.1
COORDINATES: similar to AA sequence:RefSeq:WP_005955656.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967276.1
COORDINATES: similar to AA sequence:RefSeq:WP_008901509.1
COORDINATES: similar to AA sequence:RefSeq:WP_002841111.1
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF015995.2
glycine betaine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006309192.1
glycine betaine/L-proline ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: protein motif:HMM:NF017085.2
COORDINATES: protein motif:HMM:NF012449.2
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015210.2
COORDINATES: similar to AA sequence:RefSeq:WP_002837535.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002837532.1
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002840651.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024908.2
COORDINATES: similar to AA sequence:RefSeq:WP_008392738.1
COORDINATES: similar to AA sequence:RefSeq:WP_002334003.1
COORDINATES: similar to AA sequence:RefSeq:WP_002317271.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017647836.1
COORDINATES: similar to AA sequence:RefSeq:WP_004612033.1
COORDINATES: similar to AA sequence:RefSeq:WP_009898531.1
COORDINATES: similar to AA sequence:RefSeq:WP_008392734.1
COORDINATES: similar to AA sequence:RefSeq:WP_002835608.1
CD1871A family CXXC motif-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009893966.1
COORDINATES: similar to AA sequence:RefSeq:WP_007516553.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF019984.2
group II intron maturase-specific domain-containing protein
COORDINATES: protein motif:HMM:NF012307.2
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
reverse transcriptase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019034284.1
COORDINATES: similar to AA sequence:RefSeq:WP_002340535.1
COORDINATES: protein motif:HMM:NF036772.2
COORDINATES: protein motif:HMM:NF014114.2
COORDINATES: similar to AA sequence:RefSeq:WP_005399351.1
COORDINATES: similar to AA sequence:RefSeq:WP_005399352.1
COORDINATES: similar to AA sequence:RefSeq:WP_005399353.1
COORDINATES: similar to AA sequence:RefSeq:WP_005399354.1
COORDINATES: similar to AA sequence:RefSeq:WP_015777638.1
CadD family cadmium resistance transporter
COORDINATES: similar to AA sequence:RefSeq:WP_005956877.1
COORDINATES: similar to AA sequence:RefSeq:WP_006702358.1
COORDINATES: similar to AA sequence:RefSeq:WP_016648519.1
COORDINATES: similar to AA sequence:RefSeq:WP_003145044.1
COORDINATES: similar to AA sequence:RefSeq:WP_000567888.1
COORDINATES: similar to AA sequence:RefSeq:WP_000873143.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011994748.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019117828.1
COORDINATES: similar to AA sequence:RefSeq:WP_002834853.1
COORDINATES: similar to AA sequence:RefSeq:WP_019117830.1
COORDINATES: similar to AA sequence:RefSeq:WP_019117831.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019118581.1
COORDINATES: similar to AA sequence:RefSeq:WP_000573116.1
COORDINATES: protein motif:HMM:TIGR00479.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: protein motif:HMM:NF012784.2
S1-like domain-containing RNA-binding protein
COORDINATES: protein motif:HMM:NF015999.2
COORDINATES: similar to AA sequence:RefSeq:WP_019034116.1
COORDINATES: protein motif:HMM:NF024970.2
COORDINATES: similar to AA sequence:RefSeq:WP_002837650.1
COORDINATES: similar to AA sequence:RefSeq:WP_019108029.1
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_009345120.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014966557.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_005586971.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_009431561.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005956255.1
COORDINATES: similar to AA sequence:RefSeq:WP_019116214.1
COORDINATES: similar to AA sequence:RefSeq:WP_005955312.1
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:NF013045.2
COORDINATES: protein motif:HMM:NF014656.2
COORDINATES: similar to AA sequence:RefSeq:WP_002835653.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430052.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005587315.1
GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
type 2 isopentenyl-diphosphate Delta-isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_004820973.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005388 - P-type calcium transporter activity [Evidence IEA]
GO:0006816 - calcium ion transport [Evidence IEA]
calcium-translocating P-type ATPase, SERCA-type
COORDINATES: similar to AA sequence:RefSeq:WP_009222430.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010266056.1
COORDINATES: protein motif:HMM:NF024081.2
FeoB-associated Cys-rich membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_009431039.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010244501.1
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: similar to AA sequence:RefSeq:WP_015777200.1
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0016311 - dephosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009221588.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004826473.1
COORDINATES: similar to AA sequence:RefSeq:WP_008901502.1
COORDINATES: protein motif:HMM:NF021506.2
COORDINATES: similar to AA sequence:RefSeq:WP_005957053.1
COORDINATES: similar to AA sequence:RefSeq:WP_004825601.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019108155.1
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005957415.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004824798.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004824807.1
COORDINATES: similar to AA sequence:RefSeq:WP_009221332.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
COORDINATES: similar to AA sequence:RefSeq:WP_017185218.1
COORDINATES: similar to AA sequence:RefSeq:WP_004820365.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002836134.1
COORDINATES: similar to AA sequence:RefSeq:WP_002840173.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244369.1
COORDINATES: similar to AA sequence:RefSeq:WP_005398624.1
COORDINATES: similar to AA sequence:RefSeq:WP_009346077.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244377.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002837393.1
COORDINATES: similar to AA sequence:RefSeq:WP_001140799.1
COORDINATES: similar to AA sequence:RefSeq:WP_009431782.1
COORDINATES: similar to AA sequence:RefSeq:WP_009431305.1
COORDINATES: similar to AA sequence:RefSeq:WP_002460061.1
COORDINATES: similar to AA sequence:RefSeq:WP_005957504.1
COORDINATES: similar to AA sequence:RefSeq:WP_002836118.1
COORDINATES: similar to AA sequence:RefSeq:WP_005957418.1
COORDINATES: similar to AA sequence:RefSeq:WP_008901006.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244411.1
COORDINATES: similar to AA sequence:RefSeq:WP_004836714.1
COORDINATES: similar to AA sequence:RefSeq:WP_002837367.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430728.1
COORDINATES: similar to AA sequence:RefSeq:WP_005957518.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107923.1
COORDINATES: similar to AA sequence:RefSeq:WP_004824852.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019108346.1
COORDINATES: similar to AA sequence:RefSeq:WP_019108345.1
COORDINATES: protein motif:HMM:NF015325.2
COORDINATES: similar to AA sequence:RefSeq:WP_006311818.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107870.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019107871.1
D-alanine--D-alanine ligase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005957432.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_009221456.1
COORDINATES: protein motif:HMM:NF025054.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012413.2
COORDINATES: similar to AA sequence:RefSeq:WP_008902552.1
COORDINATES: similar to AA sequence:RefSeq:WP_010242920.1
COORDINATES: similar to AA sequence:RefSeq:WP_012803652.1
COORDINATES: protein motif:HMM:NF015679.2
COORDINATES: similar to AA sequence:RefSeq:WP_005399187.1
COORDINATES: protein motif:HMM:NF017273.2
COORDINATES: protein motif:HMM:NF015549.2
COORDINATES: similar to AA sequence:RefSeq:WP_005583175.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107754.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00557
ribosomal protein L10 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF015451.2
aminoacetone oxidase family FAD-binding enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_009222083.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00494.1
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004820431.1
COORDINATES: similar to AA sequence:RefSeq:WP_002835316.1
COORDINATES: similar to AA sequence:RefSeq:WP_004824778.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_005956279.1
COORDINATES: similar to AA sequence:RefSeq:WP_002835319.1
COORDINATES: protein motif:HMM:NF024842.2
COORDINATES: similar to AA sequence:RefSeq:WP_009221789.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
phosphoribosylformylglycinamidine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_009430232.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_009221787.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004833486.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_002839642.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005957564.1
COORDINATES: protein motif:HMM:NF012425.2
GO:0004096 - catalase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014968877.1
COORDINATES: protein motif:HMM:NF018816.2
COORDINATES: similar to AA sequence:RefSeq:WP_002840452.1
double-cubane-cluster-containing anaerobic reductase
COORDINATES: similar to AA sequence:RefSeq:WP_002839581.1
COORDINATES: protein motif:HMM:TIGR01977.1
COORDINATES: similar to AA sequence:RefSeq:WP_004825010.1
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: protein motif:HMM:NF013672.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF017856.2
COORDINATES: similar to AA sequence:RefSeq:WP_005584494.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: similar to AA sequence:RefSeq:WP_010247576.1
COORDINATES: protein motif:HMM:TIGR00765.1
YihY/virulence factor BrkB family protein
COORDINATES: protein motif:HMM:NF014609.2
PhzF family phenazine biosynthesis isomerase
COORDINATES: protein motif:HMM:TIGR01448.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006307349.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_009346300.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
GO:0046358 - butyrate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004833078.1
cobalamin-independent methionine synthase II family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002840545.1
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002838798.1
COORDINATES: similar to AA sequence:RefSeq:WP_009222704.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004820913.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013380.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014968493.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430334.1
COORDINATES: similar to AA sequence:RefSeq:WP_004815571.1
COORDINATES: similar to AA sequence:RefSeq:WP_009431898.1
COORDINATES: similar to AA sequence:RefSeq:WP_002836913.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00097.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: protein motif:HMM:NF014622.2
COORDINATES: protein motif:HMM:NF006830.0
GO:0004417 - hydroxyethylthiazole kinase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF038196.1
COORDINATES: protein motif:HMM:TIGR00693.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004834655.1
GO:0016829 - lyase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019116686.1
COORDINATES: protein motif:HMM:NF006395.0
sulfur carrier protein ThiS adenylyltransferase ThiF
COORDINATES: similar to AA sequence:RefSeq:WP_002837845.1
COORDINATES: similar to AA sequence:RefSeq:WP_009431924.1
COORDINATES: similar to AA sequence:RefSeq:WP_004813628.1
COORDINATES: similar to AA sequence:RefSeq:WP_004836599.1
COORDINATES: protein motif:HMM:NF004776.0
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0004362 - glutathione-disulfide reductase (NADPH) activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0006749 - glutathione metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005955596.1
COORDINATES: similar to AA sequence:RefSeq:WP_005377116.1
COORDINATES: similar to AA sequence:RefSeq:WP_002838555.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582875.1
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: protein motif:HMM:NF013584.2
COORDINATES: similar to AA sequence:RefSeq:WP_005956022.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019034503.1
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_009431442.1
energy-coupling factor transporter ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_004824157.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF028409.2
COORDINATES: protein motif:HMM:TIGR02359.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
energy coupling factor transporter S component ThiW
COORDINATES: protein motif:HMM:NF020032.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010244878.1
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: protein motif:HMM:NF009475.0
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006541 - glutamine metabolic process [Evidence IEA]
carbamoyl phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004832569.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021903.2
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004838873.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
COORDINATES: similar to AA sequence:RefSeq:WP_010247585.1
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: protein motif:HMM:NF018021.2
COORDINATES: similar to AA sequence:RefSeq:WP_004816744.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00168
Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis, transport and catabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014968312.1
COORDINATES: protein motif:HMM:NF025496.2
folate family ECF transporter S component
COORDINATES: nucleotide motif:Rfam:14.4:RF01831
THF riboswitches regulate genes encoding folate transporters and folate metabolism; They are most commonly found in Clostridiales and Lactobacillales; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_009430960.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019107742.1
COORDINATES: similar to AA sequence:RefSeq:WP_004820237.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004820236.1
COORDINATES: protein motif:HMM:TIGR00647.1
GO:0043937 - regulation of sporulation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01826.1
COORDINATES: protein motif:HMM:NF015620.2
COORDINATES: similar to AA sequence:RefSeq:WP_006313371.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015777238.1
methionine ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004826744.1
COORDINATES: protein motif:HMM:TIGR00363.1
COORDINATES: similar to AA sequence:RefSeq:WP_002835044.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107590.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: protein motif:HMM:NF012796.2
COORDINATES: similar to AA sequence:RefSeq:WP_009221322.1
LacI family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00147.1
diacylglycerol kinase family lipid kinase
COORDINATES: similar to AA sequence:RefSeq:WP_009221324.1
COORDINATES: protein motif:HMM:NF024143.2
COORDINATES: protein motif:HMM:TIGR01856.1
GO:0004401 - histidinol-phosphatase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
histidinol-phosphatase HisJ family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010246211.1
COORDINATES: similar to AA sequence:RefSeq:WP_019118590.1
COORDINATES: similar to AA sequence:RefSeq:WP_004829367.1
isocitrate/isopropylmalate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004812829.1
COORDINATES: similar to AA sequence:RefSeq:WP_009345246.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430595.1
COORDINATES: protein motif:HMM:NF022597.2
COORDINATES: protein motif:HMM:NF019487.2
COORDINATES: similar to AA sequence:RefSeq:WP_015778199.1
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: protein motif:HMM:NF013432.2
COORDINATES: protein motif:HMM:NF012497.2
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005399075.1
GO:0033958 - DNA-deoxyinosine glycosylase activity [Evidence IEA]
GO:0006285 - base-excision repair, AP site formation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00937.1
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002840837.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:TIGR02227.1
COORDINATES: similar to AA sequence:RefSeq:WP_012290737.1
COORDINATES: protein motif:HMM:NF039507.1
Rib/alpha-like domain-containing protein
COORDINATES: protein motif:HMM:NF000658.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430023.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582238.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430046.1
COORDINATES: similar to AA sequence:RefSeq:WP_010245446.1
COORDINATES: similar to AA sequence:RefSeq:WP_006310641.1
COORDINATES: similar to AA sequence:RefSeq:WP_004815892.1
COORDINATES: similar to AA sequence:RefSeq:WP_019116286.1
COORDINATES: similar to AA sequence:RefSeq:WP_004838177.1
COORDINATES: protein motif:HMM:NF021507.2
COORDINATES: similar to AA sequence:RefSeq:WP_006317437.1
GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004815304.1
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_001141947.1
COORDINATES: similar to AA sequence:RefSeq:WP_004819285.1
MptD family putative ECF transporter S component
COORDINATES: similar to AA sequence:RefSeq:WP_009537685.1
COORDINATES: similar to AA sequence:RefSeq:WP_019214631.1
COORDINATES: similar to AA sequence:RefSeq:WP_016398247.1
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: protein motif:HMM:NF025601.2
COORDINATES: similar to AA sequence:RefSeq:WP_004819509.1
GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006565 - L-serine catabolic process [Evidence IEA]
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_019117538.1
L-serine ammonia-lyase, iron-sulfur-dependent subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014968570.1
cysteine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014968571.1
COORDINATES: similar to AA sequence:RefSeq:WP_004612080.1
COORDINATES: similar to AA sequence:RefSeq:WP_004612079.1
COORDINATES: protein motif:HMM:NF013384.2
COORDINATES: similar to AA sequence:RefSeq:WP_009221652.1
pyridoxal phosphate-dependent class II aminotransferase
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: similar to AA sequence:RefSeq:WP_004820076.1
COORDINATES: protein motif:HMM:NF017774.2
COORDINATES: similar to AA sequence:RefSeq:WP_014968421.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_004834427.1
GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012843.2
COORDINATES: similar to AA sequence:RefSeq:WP_019108494.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009432031.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010246055.1
COORDINATES: similar to AA sequence:RefSeq:WP_002839481.1
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_005397856.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: protein motif:HMM:NF016365.2
COORDINATES: similar to AA sequence:RefSeq:WP_009431084.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0051775 - response to redox state [Evidence IEA]
redox-sensing transcriptional repressor Rex
COORDINATES: similar to AA sequence:RefSeq:WP_005584477.1
COORDINATES: similar to AA sequence:RefSeq:WP_005955985.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: protein motif:HMM:TIGR01575.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: protein motif:HMM:TIGR00150.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:NF013077.2
The term CAMP (Christie, Atkins, Munch-Petersen) factor is used for toxins found in group A and B Streptococcus. Related toxins are also found in Propionibacterium acnesother and other bacterial species; Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF019020.2
COORDINATES: similar to AA sequence:RefSeq:WP_005583834.1
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004838194.1
COORDINATES: similar to AA sequence:RefSeq:WP_005957328.1
COORDINATES: similar to AA sequence:RefSeq:WP_004838933.1
COORDINATES: similar to AA sequence:RefSeq:WP_005957097.1
COORDINATES: similar to AA sequence:RefSeq:WP_004825324.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018571.2
COORDINATES: similar to AA sequence:RefSeq:WP_004826676.1
COORDINATES: similar to AA sequence:RefSeq:WP_004819113.1
COORDINATES: similar to AA sequence:RefSeq:WP_006310386.1
COORDINATES: protein motif:HMM:NF024575.2
COORDINATES: protein motif:HMM:NF017920.2
COORDINATES: similar to AA sequence:RefSeq:WP_002837271.1
COORDINATES: similar to AA sequence:RefSeq:WP_009221417.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005956156.1
alanine--glyoxylate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002838770.1
COORDINATES: similar to AA sequence:RefSeq:WP_019108036.1
COORDINATES: protein motif:HMM:NF020123.2
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005955410.1
dicarboxylate/amino acid:cation symporter
COORDINATES: protein motif:HMM:NF013694.2
magnesium transporter CorA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005955111.1
iron-containing alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009431261.1
COORDINATES: similar to AA sequence:RefSeq:WP_004838819.1
GO:0009001 - serine O-acetyltransferase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019034975.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005957234.1
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: similar to AA sequence:RefSeq:WP_004820168.1
COORDINATES: protein motif:HMM:NF016136.2
type II toxin-antitoxin system RelB/DinJ family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_016293323.1
COORDINATES: protein motif:HMM:TIGR03640.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-C CRISPR-associated endonuclease Cas1c
COORDINATES: similar to AA sequence:RefSeq:WP_016293321.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005955194.1
type I-C CRISPR-associated protein Cas7/Csd2
COORDINATES: protein motif:HMM:TIGR01863.1
type I-C CRISPR-associated protein Cas8c/Csd1
COORDINATES: protein motif:HMM:TIGR01876.1
type I-C CRISPR-associated protein Cas5c
COORDINATES: protein motif:HMM:TIGR01596.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244262.1
COORDINATES: protein motif:HMM:NF015753.2
GO:0031004 - potassium ion-transporting ATPase complex [Evidence IEA]
GO:0008556 - P-type potassium transmembrane transporter activity [Evidence IEA]
potassium-transporting ATPase subunit KdpA
COORDINATES: protein motif:HMM:NF012350.2
COORDINATES: similar to AA sequence:RefSeq:WP_005397645.1
COORDINATES: similar to AA sequence:RefSeq:WP_005397644.1
COORDINATES: similar to AA sequence:RefSeq:WP_005397641.1
COORDINATES: similar to AA sequence:RefSeq:WP_004166933.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: similar to AA sequence:RefSeq:WP_009221976.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002837645.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001040954.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: similar to AA sequence:RefSeq:WP_004814311.1
COORDINATES: protein motif:HMM:NF017536.2
pirin-like C-terminal cupin domain-containing protein
COORDINATES: protein motif:HMM:NF018743.2
COORDINATES: similar to AA sequence:RefSeq:WP_012290426.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_002835396.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013614.2
SufD family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_005956182.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107698.1
COORDINATES: protein motif:HMM:TIGR01084.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF018604.2
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: protein motif:HMM:NF016825.2
cyclodeaminase/cyclohydrolase family protein
COORDINATES: protein motif:HMM:TIGR00654.1
PhzF family phenazine biosynthesis protein
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_005399228.1
COORDINATES: similar to AA sequence:RefSeq:WP_004823732.1
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_009221635.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: protein motif:HMM:NF003661.0
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_009221631.1
RNA-binding cell elongation regulator Jag/EloR
COORDINATES: similar to AA sequence:RefSeq:WP_010245318.1
YidC/Oxa1 family membrane protein insertase
COORDINATES: similar to AA sequence:RefSeq:WP_002474682.1
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:NF013022.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010659431.1