Brucella anthropi strain PBO plasmid p1, complete sequence.
type: Entry
definition: Brucella anthropi strain PBO plasmid p1, complete sequence.
sequence version: NZ_CP064064.1
sequence date: 2023-08-07
sequence: sequence
division: CON
label: NZ_CP064064.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN16619790
keyword: RefSeq
source: Brucella anthropi (Ochrobactrum anthropi)
organism: Brucella anthropi
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group; Brucella.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP064064.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. V2.0 and V3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 2.3x\nSequencing Technology :: Illumina PE150\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 08/06/2023 02:37:49\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,587\nCDSs (total) :: 4,514\nGenes (coding) :: 4,462\nCDSs (with protein) :: 4,462\nGenes (RNA) :: 73\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 57\nncRNAs :: 4\nPseudo Genes (total) :: 52\nCDSs (without protein) :: 52\nPseudo Genes (ambiguous residues) :: 0 of 52\nPseudo Genes (frameshifted) :: 29 of 52\nPseudo Genes (incomplete) :: 34 of 52\nPseudo Genes (internal stop) :: 7 of 52\nPseudo Genes (multiple problems) :: 16 of 52\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 27634
topology: circular
so has quality: SO_0000988
location: 1..27634
location: region:1-27634:1
RO_0002162: 529

NZ_CP064064
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN16619790
type: BioSample
SIO_000068: biosample

1
title: A marine bacterial community that degrades poly (ethylene terephthalate) and polyethylene
author: Gao, r.
journal: Unpublished

2
title: Direct Submission
author: Gao, r.
journal: Submitted (03-NOV-2020) Key Laboratory of Marine Biotechnology, Qingdao, The Institute of Oceanology, Chinese Academy of Sciences, No. 7 Nanhai Road, Qingdao, Shandong 266071, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27634:1
position: 27634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-27634:1:source
so part of: sequence
organism: Brucella anthropi
mol type: genomic DNA
strain: PBO
isolation source: plastics debris from sea coast
plasmid: p1
country: China: Qingdao
collection date: 2017-07-30

529
type: Taxonomy
SIO_000068: taxonomy

IR196_RS22725
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22725
old locus tag: IR196_22725
so part of: sequence
location: join(27227..27634,1..36)
location: region:1-27634:1
so has part: feature:27227-27634:1:exon
so has part: feature:1-36:1:exon
subclass of: SO_0000010

61318839
type: Gene
SIO_000068: ncbigene

urn:…
SIO_000300: 1
SIO_000628: feature:27227-27634:1:exon

position:27227:1
position: 27227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-36:1:exon

position:36:1
position: 36
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IR196_RS22725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22725
old locus tag: IR196_22725
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAYLRQARGSLLLLTVPLLVYLGLYIGPLIGVLMQSVDNTQLAKRFDALSEHIERSPTIDDGTAAAILSDLARMTKQERAETGRVLNQEKNGLRRLLMETGADAATIVPTLAGLESFNSAWADMENWHVLQRVASPSHGAISNEQPD
SIO_010081: IR196_RS22725
subclass of: SO_0000673
so part of: IR196_RS22725
location: join(27227..27634,1..36)
location: region:1-27634:1
so has part: feature:27227-27634:1:exon
so has part: feature:1-36:1:exon

WP_194532012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27227-27634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-36:1:exon

IR196_RS22730
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22730
old locus tag: IR196_22730
so part of: sequence
location: 33..764
location: region:33-764:1
so has part: feature:33-764:1:exon
subclass of: SO_0000010

61318840
type: Gene
SIO_000068: ncbigene

position:33:1
position: 33
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764:1
position: 764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33-764:1:exon

IR196_RS22730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22730
old locus tag: IR196_22730
EC number: 7.-.-.-
inference: COORDINATES: protein motif:HMM:NF012738.2
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MTRGSDGSWSRNDGDDLYVRILGRTLFIAAQVALLTTLIGYPIAYLIANSSPTVRWLVLSAVVLSFWTSILVRTTAWVVLLQTRGLVNELLLWLNFIDEPLQLIFNRLGAVLAMTHVMLPFAILPIYNVMRTIPPDQRLASRSLGAGPIETFLRAYLPQTKRGILIGAGTVYILALGFYITPALTGGPSDQMLSYYISDFVQRGLNWGMASTLSILLLICLLVMLGIGVLLLRVLGPGAESPR
SIO_010081: IR196_RS22730
subclass of: SO_0000673
so part of: IR196_RS22730
location: 33..764
location: region:33-764:1
so has part: feature:33-764:1:exon

WP_194532013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33-764:1:exon

IR196_RS22735
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22735
old locus tag: IR196_22735
so part of: sequence
location: 761..1549
location: region:761-1549:1
so has part: feature:761-1549:1:exon
subclass of: SO_0000010

61318841
type: Gene
SIO_000068: ncbigene

position:761:1
position: 761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1549:1
position: 1549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761-1549:1:exon

IR196_RS22735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22735
old locus tag: IR196_22735
EC number: 7.-.-.-
inference: COORDINATES: protein motif:HMM:NF012738.2
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MMARIVHALSAGLGVAFLVLPIVVVMPLAFNDSTFLAYPMNGFTLRWFSVVFTKAPWMASLANSLVIACGAMVLSLLVGGLAAVGTAQVGKIQQAVLSALFISPLVLPSVIFGVAIAYAAARVGATGTYLSLILAHTVLGAPLVYVSIINGLKGLDQDLEQAAASLGARRWYRFRTVILPLTLPSFLSGALLAFMSSFDEVVVALFLSSPQTITLPIVLFSSLRDQLEPTLVVVSLLLTLLSMLLLIVLRVLDRRTAIARKV
SIO_010081: IR196_RS22735
subclass of: SO_0000673
so part of: IR196_RS22735
location: 761..1549
location: region:761-1549:1
so has part: feature:761-1549:1:exon

WP_194532014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:761-1549:1:exon

IR196_RS22740
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22740
old locus tag: IR196_22740
so part of: sequence
location: 1564..2703
location: region:1564-2703:1
so has part: feature:1564-2703:1:exon
subclass of: SO_0000010

61318842
type: Gene
SIO_000068: ncbigene

position:1564:1
position: 1564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2703:1
position: 2703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1564-2703:1:exon

IR196_RS22740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22740
old locus tag: IR196_22740
inference: COORDINATES: protein motif:HMM:TIGR01187.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MNAQYREFQGNQPDASPDGAAKPVVIAAINKNYGSFQALHDVSLTIRPGEFITLLGPSGSGKTTLLKILAGFESVSSGTIGLDGRDITRLPPERRNFGFVFQGFALFSHLTVFENIAYPLRVRRMSGNDITVRVTEMLELVQLQDYARRKPSELSGGQQQRVALARALAFKPKLLLLDEPMSALDKKLRHALQEELREIHQRLGTTFVNVTHDQEEAMHMSDRIAVLSEGKIQQFDTASEIYRRPVNRFVAEFIGKSNIFSGVVRKTAQGMILSGDGFAIPLSAEYAEAEHIEIVARPEDLLVVSLGSQPVVTESILAGTVIKSTYSGDRVLYVLALPQGREILAYGSAQHGTLANGTQVEVHFNPQLFHRLEISGGPK
SIO_010081: IR196_RS22740
subclass of: SO_0000673
so part of: IR196_RS22740
location: 1564..2703
location: region:1564-2703:1
so has part: feature:1564-2703:1:exon

WP_194532015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1564-2703:1:exon

IR196_RS22745
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22745
old locus tag: IR196_22745
so part of: sequence
location: 2715..3059
location: region:2715-3059:1
so has part: feature:2715-3059:1:exon
subclass of: SO_0000010

61318843
type: Gene
SIO_000068: ncbigene

position:2715:1
position: 2715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3059:1
position: 3059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2715-3059:1:exon

IR196_RS22745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22745
old locus tag: IR196_22745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018493243.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MQTFNYFNDLMLGNGEVTRPPPELVLEGNPVFTTWTVDDQGLTTGVWEATPGMHFMQRDSSSQEVFTLTRGRIEITPEGGQPQQYGVGDTVILKGEFRGRWRTIETVRKIFVSV
SIO_010081: IR196_RS22745
subclass of: SO_0000673
so part of: IR196_RS22745
location: 2715..3059
location: region:2715-3059:1
so has part: feature:2715-3059:1:exon

WP_194532016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2715-3059:1:exon

IR196_RS22750
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22750
old locus tag: IR196_22750
so part of: sequence
location: 3115..4338
location: region:3115-4338:1
so has part: feature:3115-4338:1:exon
subclass of: SO_0000010

61318844
type: Gene
SIO_000068: ncbigene

position:3115:1
position: 3115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4338:1
position: 4338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3115-4338:1:exon

IR196_RS22750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22750
old locus tag: IR196_22750
EC number: 1.-.-.-
inference: COORDINATES: protein motif:HMM:NF013739.2
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MKVLVAGAGLSGLNAAWELHKKGHEVTVFESAGRVGGRCWSEALPNGEIIEYGGEFIDVNDHTIRRIAAEFRLPLVTLGIPFDRRWQVDGSIMSPEELIQCVDAMADTAHRMEVEKGHHFSLRELARETFGEGYATHRYCQKLFATTTCDPDRVNGYAIAKKYRGRGPLYVEHRSRLLHGNDAIAKEMHRRMGDVIRFNNALVRVIQDRDGVEFTLANNEVVRGDAAVIAVPLPKLKRLIATLDLPHDMQQAIETREMGAAAKLNIAVSGDAPPKGMQTPNGPWWSWSTADPSGTKARGSLTGYAGGWATMRSLGLEESPERWLSEIKAYRTDLEVSDTYIFHNWGTYEHTEGAYSMPGLAWEPEFDNAFNRLAGRIAFAGEHTYQASLNGALESGARAASLLTLTP
SIO_010081: IR196_RS22750
subclass of: SO_0000673
so part of: IR196_RS22750
location: 3115..4338
location: region:3115-4338:1
so has part: feature:3115-4338:1:exon

WP_194532017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3115-4338:1:exon

IR196_RS22755
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22755
old locus tag: IR196_22755
so part of: sequence
location: 4415..5371
location: region:4415-5371:1
so has part: feature:4415-5371:1:exon
subclass of: SO_0000010

61318845
type: Gene
SIO_000068: ncbigene

position:4415:1
position: 4415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5371:1
position: 5371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4415-5371:1:exon

IR196_RS22755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22755
old locus tag: IR196_22755
inference: COORDINATES: protein motif:HMM:NF013088.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EamA family transporter
translation: MIAQNGSINSPDLNVTVVAGVAFVLMATFINALGSVISKILLDHLTVSELALARVTVTFLVLLTIMLICKPSALRLSRQEIPALVIYGLAGMVLSPLMFFHAIARLPVGLALVFEYTAPLLVVLYLRIFHVVSVPVRVLLGILVCLAGLATITMPLGAVSISASGFAFGIGAAFALAGVYLAGSSASRRRTPLAVATFGYLVGTVAIQIVNPIWTFPFSTLVSAVQISLGGSVVVETRVWMVLLAIGSLFSALPTFLVLKGISFLGPARASALSMTEPVFSFGLGWLLINEYLTLRQIIGSFIVIFGLLLQNAGARRR
SIO_010081: IR196_RS22755
subclass of: SO_0000673
so part of: IR196_RS22755
location: 4415..5371
location: region:4415-5371:1
so has part: feature:4415-5371:1:exon

WP_194532018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4415-5371:1:exon

IR196_RS23075
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS23075
pseudo: true
so part of: sequence
location: complement(<5608..>5735)
location: region:5608-5735:-1
so has part: feature:5608-5735:-1:exon
subclass of: SO_0000010

71774100
type: Gene
SIO_000068: ncbigene

position:5608:-1
position: 5608
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:5735:-1
position: 5735
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5608-5735:-1:exon

IR196_RS23075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS23075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004206952.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Hin recombinase
SIO_010081: IR196_RS23075
subclass of: SO_0000673
so part of: IR196_RS23075
location: complement(<5608..>5735)
location: region:5608-5735:-1
so has part: feature:5608-5735:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5608-5735:-1:exon

IR196_RS23080
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS23080
so part of: sequence
location: 6003..6134
location: region:6003-6134:1
so has part: feature:6003-6134:1:exon
subclass of: SO_0000010

71774101
type: Gene
SIO_000068: ncbigene

position:6003:1
position: 6003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6134:1
position: 6134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6003-6134:1:exon

IR196_RS23080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS23080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018009486.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix protein, CopG family
translation: MNTDLPAEMVKAIDQIKEAKGVRGRTPIIEEALRFYIEANQGI
SIO_010081: IR196_RS23080
subclass of: SO_0000673
so part of: IR196_RS23080
location: 6003..6134
location: region:6003-6134:1
so has part: feature:6003-6134:1:exon

WP_244980392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6003-6134:1:exon

IR196_RS22765
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22765
old locus tag: IR196_22765
so part of: sequence
location: 6326..7204
location: region:6326-7204:1
so has part: feature:6326-7204:1:exon
subclass of: SO_0000010

61318847
type: Gene
SIO_000068: ncbigene

position:6326:1
position: 6326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7204:1
position: 7204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6326-7204:1:exon

IR196_RS22765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22765
old locus tag: IR196_22765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017502926.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MLRTHYAAAIGCARRSALEEIMREVWTRYSAGHLTEDEAGQLSTLAQERRDALRGSGQATFSLVLPPPAERCPTPVRRHSHVKGRSEGRIWQPTTRKDVQAILKAAEIYNEAGLREKGERSGPLGSVALDVLRLFVNLIDFRTGRLEPSITTIMDRLGRSRDTVVRALKNLRTHGFIDWLRRYEPTGNEGRGPQVQQASNAYRLSLPEKARQFLGRFGKAPPPPEDHSTAQEARAVDLDAYRRALPLCERALFDLGDTALGRAMASLGRVVQKRESDNQTESHSNSILYQKI
SIO_010081: IR196_RS22765
subclass of: SO_0000673
so part of: IR196_RS22765
location: 6326..7204
location: region:6326-7204:1
so has part: feature:6326-7204:1:exon

WP_194532020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6326-7204:1:exon

IR196_RS22770
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22770
old locus tag: IR196_22770
so part of: sequence
location: 7703..8362
location: region:7703-8362:1
so has part: feature:7703-8362:1:exon
subclass of: SO_0000010

61318848
type: Gene
SIO_000068: ncbigene

position:7703:1
position: 7703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8362:1
position: 8362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7703-8362:1:exon

IR196_RS22770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22770
old locus tag: IR196_22770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010661810.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MITVAFCTQKGGTGKTTIATALAVAAHRAGQKSALLDLDPQTNAVNWFDRREGDGPDVASIQPGAIRRSLDAYRGLGMDWVFIDTPGKMDSASTEAAKYADMVVIPTQAQIFAIDTLEPLKRLLDMAGNPPAFVLLNQVHPNAWGRAADDAAAIAERFSMAVASVHLSRLKAHEDAPALGRTAQELEPEGRAAQEITDLFKFLSEQASMIATNHGRMKS
SIO_010081: IR196_RS22770
subclass of: SO_0000673
so part of: IR196_RS22770
location: 7703..8362
location: region:7703-8362:1
so has part: feature:7703-8362:1:exon

WP_194532021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7703-8362:1:exon

IR196_RS22775
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22775
old locus tag: IR196_22775
so part of: sequence
location: 8359..8697
location: region:8359-8697:1
so has part: feature:8359-8697:1:exon
subclass of: SO_0000010

61318849
type: Gene
SIO_000068: ncbigene

position:8359:1
position: 8359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8697:1
position: 8697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8359-8697:1:exon

IR196_RS22775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22775
old locus tag: IR196_22775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010661809.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosome partitioning protein ParB
translation: MSRKPSLLASAIKIAEQPAADPSIDEVSDTPVEPKRGVRNALATGSYIAPSRANKTAKTHYLRPIYWETLEEVSFRTRDLQGKRVPQERLVAEALNLLFAKYNFPVVREGRE
SIO_010081: IR196_RS22775
subclass of: SO_0000673
so part of: IR196_RS22775
location: 8359..8697
location: region:8359-8697:1
so has part: feature:8359-8697:1:exon

WP_194532030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8359-8697:1:exon

IR196_RS22780
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22780
old locus tag: IR196_22780
so part of: sequence
location: 8809..9057
location: region:8809-9057:1
so has part: feature:8809-9057:1:exon
subclass of: SO_0000010

61318850
type: Gene
SIO_000068: ncbigene

position:8809:1
position: 8809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9057:1
position: 9057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8809-9057:1:exon

IR196_RS22780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22780
old locus tag: IR196_22780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003527850.1
GO process: GO:0051983 - regulation of chromosome segregation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system ParD family antitoxin
translation: MAARSTSISLGDHFAGFIDSQVQTGRYGSVSDVVRAGLRLLEEHEAKVKALEAALIEGEESGEPEPFDNEAFKAEMRAEYGH
SIO_010081: IR196_RS22780
subclass of: SO_0000673
so part of: IR196_RS22780
location: 8809..9057
location: region:8809-9057:1
so has part: feature:8809-9057:1:exon

WP_194532022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8809-9057:1:exon

IR196_RS22785
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22785
old locus tag: IR196_22785
so part of: sequence
location: 9047..9343
location: region:9047-9343:1
so has part: feature:9047-9343:1:exon
subclass of: SO_0000010

61318851
type: Gene
SIO_000068: ncbigene

position:9047:1
position: 9047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9343:1
position: 9343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9047-9343:1:exon

IR196_RS22785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22785
old locus tag: IR196_22785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017268214.1
GO function: GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO process: GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MATKRPFRLAPAAKADLRKIWRYTARRWSLEQAETYQDQLYAAFEGLAAGTKKGRDVDVRRGYLKYPAGSHIVYFKDRGDRIEIIRVLHGRMDASRHL
SIO_010081: IR196_RS22785
subclass of: SO_0000673
so part of: IR196_RS22785
location: 9047..9343
location: region:9047-9343:1
so has part: feature:9047-9343:1:exon

WP_194532023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9047-9343:1:exon

IR196_RS22790
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22790
old locus tag: IR196_22790
pseudo: true
so part of: sequence
location: 9378..9601
location: region:9378-9601:1
so has part: feature:9378-9601:1:exon
subclass of: SO_0000010

61318852
type: Gene
SIO_000068: ncbigene

position:9378:1
position: 9378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9601:1
position: 9601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9378-9601:1:exon

IR196_RS22790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22790
old locus tag: IR196_22790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018310970.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: IR196_RS22790
subclass of: SO_0000673
so part of: IR196_RS22790
location: 9378..9601
location: region:9378-9601:1
so has part: feature:9378-9601:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9378-9601:1:exon

IR196_RS22795
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22795
old locus tag: IR196_22795
so part of: sequence
location: complement(10082..10429)
location: region:10082-10429:-1
so has part: feature:10082-10429:-1:exon
subclass of: SO_0000010

61318853
type: Gene
SIO_000068: ncbigene

position:10082:-1
position: 10082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10429:-1
position: 10429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10082-10429:-1:exon

IR196_RS22795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22795
old locus tag: IR196_22795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019832394.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDDVMTDTDAPEWPGPADEAHAVEQAKWLGNQVAEGGLRFEAYLPPSLALWLLDLIEQGKFLDPSEAVSVILGEHQELEPHADLRRELFKRRIQAAIDDPRPGISGEMMKRLRG
SIO_010081: IR196_RS22795
subclass of: SO_0000673
so part of: IR196_RS22795
location: complement(10082..10429)
location: region:10082-10429:-1
so has part: feature:10082-10429:-1:exon

WP_244980393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10082-10429:-1:exon

IR196_RS22800
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22800
old locus tag: IR196_22800
so part of: sequence
location: complement(10503..10712)
location: region:10503-10712:-1
so has part: feature:10503-10712:-1:exon
subclass of: SO_0000010

61318854
type: Gene
SIO_000068: ncbigene

position:10503:-1
position: 10503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10712:-1
position: 10712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10503-10712:-1:exon

IR196_RS22800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22800
old locus tag: IR196_22800
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAPDFSFWDVIILGLIIFWPATICVVIAFLVLAWLGTKNAGWRVFWIIAAIATAMPLIWYVAEMGFIAP
SIO_010081: IR196_RS22800
subclass of: SO_0000673
so part of: IR196_RS22800
location: complement(10503..10712)
location: region:10503-10712:-1
so has part: feature:10503-10712:-1:exon

WP_194532024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10503-10712:-1:exon

IR196_RS22805
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22805
old locus tag: IR196_22805
so part of: sequence
location: complement(10717..11001)
location: region:10717-11001:-1
so has part: feature:10717-11001:-1:exon
subclass of: SO_0000010

61318855
type: Gene
SIO_000068: ncbigene

position:10717:-1
position: 10717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11001:-1
position: 11001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10717-11001:-1:exon

IR196_RS22805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22805
old locus tag: IR196_22805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018009413.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mobilization protein
translation: MARKTIEQRLAELDAQRATLKARLSKQERANDTRRKVLLGALVLHRLENPNDPDFTRRLGDWLRKELPGFLTRDGDKALFADLLGSADKTETAQ
SIO_010081: IR196_RS22805
subclass of: SO_0000673
so part of: IR196_RS22805
location: complement(10717..11001)
location: region:10717-11001:-1
so has part: feature:10717-11001:-1:exon

WP_194532025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10717-11001:-1:exon

IR196_RS22810
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22810
old locus tag: IR196_22810
so part of: sequence
location: complement(10982..11230)
location: region:10982-11230:-1
so has part: feature:10982-11230:-1:exon
subclass of: SO_0000010

61318856
type: Gene
SIO_000068: ncbigene

position:10982:-1
position: 10982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11230:-1
position: 11230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10982-11230:-1:exon

IR196_RS22810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22810
old locus tag: IR196_22810
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDETYDRSAIEMLKGLNPLSHRKPWHGRMVDPTDPVQVARFLKSVEDYALENPVEDLTALITQLKNELAAMGDKRHGAQDD
SIO_010081: IR196_RS22810
subclass of: SO_0000673
so part of: IR196_RS22810
location: complement(10982..11230)
location: region:10982-11230:-1
so has part: feature:10982-11230:-1:exon

WP_194532026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10982-11230:-1:exon

IR196_RS22815
type: Gene
subclass of: SO_0000704
RO_0002162: 529
gene: traA
locus tag: IR196_RS22815
old locus tag: IR196_22815
so part of: sequence
location: 11507..15310
location: region:11507-15310:1
so has part: feature:11507-15310:1:exon
subclass of: SO_0000010

61318857
type: Gene
SIO_000068: ncbigene

position:11507:1
position: 11507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15310:1
position: 15310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11507-15310:1:exon

IR196_RS22815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
gene: traA
locus tag: IR196_RS22815
old locus tag: IR196_22815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010661803.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer relaxase TraA
translation: MAIYHFSMKPVSRAKGRSAVASIAYRAGEKLTNERDGITHDYTHRSGVEHAEIVLPEPGAGTTGVNADWARDRSVLWNAAEFAEKRKDARVAREFEIALPHELSAEQRLEATWEIAQELANRYGAAVDFAIHTPHEEGDVRNHHAHLLMTTRQVTEDGLGDKTYLERENKWLLASNLPTTDMQLRDLRQRWEGIANERLAMAGLDIRIDHRSHMERGLEIAPTEHMGVHATQMERRGLEVTRSRLDEEAAQRNADLIREKPEQVLILITGEKSVFDRRDVARALHRYINDDVQAFQNAFAQVMASPALVELQPERPDPVTGEIALGRYSTREMVEIESGMIERAQRMHEARDHGVSHRYVERALNVQDKAISLAVASDTASKVERGEMDAAERDRQIEAARLSDEQRQAIEHITGPEQISAVVGFAGAGKSTMLAAAREAWEAEGYKVHGAALSGKAAEGLEESSGIHSRTLASWSYRWDSDRGQLNRGDVFVIDEAGMIGSRQLARFVGEAEARGAKIVLVGDHEQLQAIGAGAPFRAIAEEIGHAELSEIRRQRVDWQRAASVDFATHRTAEGLAAYHAHGDIRFSETGEGVRGQIVRDYLADRDERPEGSRVAMAHRRADVRALNADIRAALQERGELAQGNVPAVGSDAGALTFQTNDGKREFAPGDRIVFLENDRDLGVKNGMLGTVEHVAAQRPGAGPMIIATLDRGDSIAVPMDSYQAVDHGYATTIHKNQGATVDRSFVLASGTMDRHLTYVAMTRHRDEVQLYAAEDEFTKAGKLVENGAAPFEHDPKNSDSYFVTLENDQGQQRTIWGVDLERAMTEASPEIGEKIGLEHVGSTPVTLPDGTETHRNTWQVREANELAYAQLEKHLSRSGVKETTLDYASDLAERQFAERRGIAESMGVVSEIELPAERQRKSLSRSERSVPASWGRGGDIEDRDHAREDASTGRLHSFSAKDKDEDHARGSSQKPGVDLAQDLREDPHADLGKNLASERAQQERVDENSPQIDQQSPQQVERKRGGIFAGLKLTVSSGAPTAPSQASWMQPERERSLRPAPAPASPAFDRLAERVRAQSPLEVAVDRYARAYQSIAQHHADGLPILDMQRQEIRAAGKQLDQVHAGMKDLMVSTLGHDPEAARAMTALSGRERVSHVIDAMQHENAALQDPHVRADRFMNRWQELQDQQRELRGWRHDEARARIGDQLQGLAKSLERDPQVDSILRNRSRELGIRHTLSRGESVAQALQVDRSRGQSMSRGFGIEM
SIO_010081: IR196_RS22815
subclass of: SO_0000673
so part of: IR196_RS22815
location: 11507..15310
location: region:11507-15310:1
so has part: feature:11507-15310:1:exon

WP_194532027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11507-15310:1:exon

IR196_RS22820
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22820
old locus tag: IR196_22820
so part of: sequence
location: 15339..16088
location: region:15339-16088:1
so has part: feature:15339-16088:1:exon
subclass of: SO_0000010

61318858
type: Gene
SIO_000068: ncbigene

position:15339:1
position: 15339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16088:1
position: 16088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15339-16088:1:exon

IR196_RS22820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22820
old locus tag: IR196_22820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017502936.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6118 family protein
translation: MTERDDEQETALAVLDEDEAGDPAAAFDALRRTIEAQGAQIAAELTVMRRGLEAAFDQFDRIGVPQDYKPQLARIVQALDTVADRLQDVEQLPVLKQDAQHYAAIIGRSGENLVHGAVRQIERQASDLERVGRNLTERIESARERRRQDWWLSGMAGGGVIIGVLLTLFAPRILPGTIDMAVASTVMNDDRWNAGAALMQSESPAGWRNIVDADHLVQANRETLTACASAAAKAGKDQKCTITVSAPTR
SIO_010081: IR196_RS22820
subclass of: SO_0000673
so part of: IR196_RS22820
location: 15339..16088
location: region:15339-16088:1
so has part: feature:15339-16088:1:exon

WP_194532000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15339-16088:1:exon

IR196_RS22825
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22825
old locus tag: IR196_22825
so part of: sequence
location: 16104..16358
location: region:16104-16358:1
so has part: feature:16104-16358:1:exon
subclass of: SO_0000010

61318859
type: Gene
SIO_000068: ncbigene

position:16104:1
position: 16104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16358:1
position: 16358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16104-16358:1:exon

IR196_RS22825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22825
old locus tag: IR196_22825
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVRFKVGAVATAPFAHGMRWDPVYSIDELPVGNAAERLSIIHDGLALFFYWLSSSGVLDLINETLIMLTRLLGWSRSRTDGWNG
SIO_010081: IR196_RS22825
subclass of: SO_0000673
so part of: IR196_RS22825
location: 16104..16358
location: region:16104-16358:1
so has part: feature:16104-16358:1:exon

WP_194532001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16104-16358:1:exon

IR196_RS22830
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22830
old locus tag: IR196_22830
so part of: sequence
location: 16642..17211
location: region:16642-17211:1
so has part: feature:16642-17211:1:exon
subclass of: SO_0000010

61318860
type: Gene
SIO_000068: ncbigene

position:16642:1
position: 16642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17211:1
position: 17211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16642-17211:1:exon

IR196_RS22830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22830
old locus tag: IR196_22830
inference: COORDINATES: protein motif:HMM:NF019498.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MKADIDRQWEVIGRNIKRHRLRQRLSLRDLGLLCGASASFLSQLERGVSGAHISTLMQIGASLHVSLSELTMEADNAEVHVVRALDRGAISSDEDHQKFLITRKSYGSFEVFIHRINPETANASEPYTHGNAQECIYILSGEVDVRVGAQTIGLRAGDAMEYRSSMPHLITNPGKKIAEVLFVVGPDEP
SIO_010081: IR196_RS22830
subclass of: SO_0000673
so part of: IR196_RS22830
location: 16642..17211
location: region:16642-17211:1
so has part: feature:16642-17211:1:exon

WP_194532002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16642-17211:1:exon

IR196_RS22835
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22835
old locus tag: IR196_22835
so part of: sequence
location: 17239..18303
location: region:17239-18303:1
so has part: feature:17239-18303:1:exon
subclass of: SO_0000010

61318861
type: Gene
SIO_000068: ncbigene

position:17239:1
position: 17239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18303:1
position: 18303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17239-18303:1:exon

IR196_RS22835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22835
old locus tag: IR196_22835
inference: COORDINATES: protein motif:HMM:NF024808.2
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MKKNKLLLTALAWVPVFCGLANAAPVAGEVAPNSLTGQTIVFASSGGILQDGQKQAIWDPFQKESGATVLQDFGVFSKLKAMIDSKNVSWDMYIGDRYLSYQYCGDFFEKIDKTVVDLTNIPEGLVSDDCMVPAIIYADIMVYDADKYSTPPKNWQDFFDVEKFPGKRGVNMSSSPMTGLIVGALLADGVAPDKLYPIDFDRAFKKLRSIEDHLVGWTTGAQAQQQLESGEVSMAQVWNGRGFGAAQAGHNIKPIWNDWMVAVDSVSIPKGSKNVAAAQAGLNYYLGAKQTERLAELTSYAPVNVNAKPQLSDLAIQWMPNKERFKTSHNPDVKWWSEHWSEFSDRWSAWISGY
SIO_010081: IR196_RS22835
subclass of: SO_0000673
so part of: IR196_RS22835
location: 17239..18303
location: region:17239-18303:1
so has part: feature:17239-18303:1:exon

WP_194532003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17239-18303:1:exon

IR196_RS22840
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22840
old locus tag: IR196_22840
so part of: sequence
location: 18315..19187
location: region:18315-19187:1
so has part: feature:18315-19187:1:exon
subclass of: SO_0000010

61318862
type: Gene
SIO_000068: ncbigene

position:18315:1
position: 18315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19187:1
position: 19187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18315-19187:1:exon

IR196_RS22840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22840
old locus tag: IR196_22840
EC number: 7.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017792348.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MTLATAGEGRASRVHSPRDISLVILVPALAFMVIFFIYPLCDILWKSISLPRLGMQNYVWFFTNNVNVAVSLRSFWTALIVSAVCLVLAYPYAYVMSRVRPRMRALLLAIVLTPLWTSLMVRTLAWIVLLQDTGVINDVLEMLGIGRLQLIRTTTGVIIGMAQMLMPFMVLPLYSVMSKIDGSLQLAAQSLGAKPSVAFWRIYVPLTKPGIFAGTMTVFVLSLGFYIIPALLGSPRNTMISAMIQQQVSGLLEWGRGSAMGIVLLVSTLIVIAIFMRLSRGLKLDGVGRL
SIO_010081: IR196_RS22840
subclass of: SO_0000673
so part of: IR196_RS22840
location: 18315..19187
location: region:18315-19187:1
so has part: feature:18315-19187:1:exon

WP_244980390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18315-19187:1:exon

IR196_RS22845
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22845
old locus tag: IR196_22845
so part of: sequence
location: 19184..19972
location: region:19184-19972:1
so has part: feature:19184-19972:1:exon
subclass of: SO_0000010

61318863
type: Gene
SIO_000068: ncbigene

position:19184:1
position: 19184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19972:1
position: 19972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19184-19972:1:exon

IR196_RS22845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22845
old locus tag: IR196_22845
EC number: 7.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017883853.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MMSRHLINISVTVVALWIIAPLFVIILTSVNSEASFSFPPQGFSLRWYTNFLSDAGWLSAFYDTSIVAILTTIVATALGLLAALGLYRSNFYGKRAITGLLISPMIVPGILVAVGLYSVFTRFGLVGTLTGFVIAHTVVAIPLVVINVLSALSSFDPKLAQAAGSLGATPLTTFRKITLPLILPGVAAGAAFAFVTSFDEIIISLFIQSPFIQTLPVKMFQSVTFDSDPTVAAGAVLMMCISVGLASLTALIKRPAELKNDQ
SIO_010081: IR196_RS22845
subclass of: SO_0000673
so part of: IR196_RS22845
location: 19184..19972
location: region:19184-19972:1
so has part: feature:19184-19972:1:exon

WP_194532005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19184-19972:1:exon

IR196_RS22850
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22850
old locus tag: IR196_22850
so part of: sequence
location: 19962..21071
location: region:19962-21071:1
so has part: feature:19962-21071:1:exon
subclass of: SO_0000010

61318864
type: Gene
SIO_000068: ncbigene

position:19962:1
position: 19962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21071:1
position: 21071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19962-21071:1:exon

IR196_RS22850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22850
old locus tag: IR196_22850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012932058.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MISKDDVMATGVGAPVELRNISRKYGHFDAVKNVNLTIAAGEFMTFLGPSGSGKTTTLNLIAGFSEVSSGEIAIGGTQMHRTPPYRRNLGVVFQSYALFPHMTVAQNISFPLEQKNIPRAQRQDLVREAIQLVELQGMESRIPSQLSGGQQQRAALARALVFKPNVLLLDEPLGALDKKLREALQDELKRIHNNVRSTFIFVTHDQEEALALSDRIAIFNRGTIEQVGTGQQLYETPETLFVGRFLGDSNTLRGERLADGSQTSVLSFKGNQLVTPFTPDKSRNILLLRPEKMRLQPRTEHFLAPGDNKLAATVTTITYLGSSWKYDVILDDGTPVIVRQHAESNIHQPGDAVDVVWAHSTGVLLNDAD
SIO_010081: IR196_RS22850
subclass of: SO_0000673
so part of: IR196_RS22850
location: 19962..21071
location: region:19962-21071:1
so has part: feature:19962-21071:1:exon

WP_244980391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19962-21071:1:exon

IR196_RS22855
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22855
old locus tag: IR196_22855
so part of: sequence
location: 21058..22071
location: region:21058-22071:1
so has part: feature:21058-22071:1:exon
subclass of: SO_0000010

61318865
type: Gene
SIO_000068: ncbigene

position:21058:1
position: 21058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22071:1
position: 22071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21058-22071:1:exon

IR196_RS22855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22855
old locus tag: IR196_22855
inference: COORDINATES: protein motif:HMM:NF013088.2
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MTQIERTDILQIENLNSPVPVGSTEKTNVYPNVIFGVVAMLTAALLNSLGSVLSKILLGHFSVSQLAFGRVLVTFVILLLICAVRIRRIPPLTSSDVMAFIGYGLAGMVMSPCMYFGAIDRISIGVVLILEYSAPIIVLAYLRLVRGELIPRPIAVAMAICIVGLACVALSGGALVLNATGIFFGFGAAIALAAVYLLAEKSLKNRPTLFISTFGYLVGSIAWIFLAPVWSFPFDMLNATVQVTLGNGISGQLNVTLMFMILGGAFTVLPTLLMLSGIRILGPARASSLSISEPIISSVIAWLVLGQVLSPLQFLGGGITIIGLLLLERARRYSRTL
SIO_010081: IR196_RS22855
subclass of: SO_0000673
so part of: IR196_RS22855
location: 21058..22071
location: region:21058-22071:1
so has part: feature:21058-22071:1:exon

WP_194532006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21058-22071:1:exon

IR196_RS22860
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22860
old locus tag: IR196_22860
so part of: sequence
location: 22096..23325
location: region:22096-23325:1
so has part: feature:22096-23325:1:exon
subclass of: SO_0000010

61318866
type: Gene
SIO_000068: ncbigene

position:22096:1
position: 22096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23325:1
position: 23325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22096-23325:1:exon

IR196_RS22860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22860
old locus tag: IR196_22860
EC number: 1.-.-.-
inference: COORDINATES: protein motif:HMM:NF013739.2
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MKIVIAGAGLAGMQAAWRLANEGHEVTVLESSNRVGGRSWSQQLSNGEYIERGGEFISPEDHAIRYLCAELNIQIVSHEIAFNRRWMHDGTRMSAEQLNGYTNKLHNTIRAMERDRQNDISLDAAAREAFGSDYQSNRMYLRMITSLSQDATKVSARGVLHREGNATDYVEHGGRVLKGNNFITQEIHRRLGSESVKFGQVITAVEQKNDKVVFTTSSGDEFVGDAAVIAIPLPKLKELMKGFSLPSLVREVIETRQMGVAAKISVGTRSGAMPRGEQYPEELWWTWNSASPYGGHEGRPAVTAFAGTKPTVDKLELQDGGVAWKKKIQDSRKDLDLTDEYIMTDWQHQPHTLGVYSAPGLEWRPEFETAFDDLVGRVAFAGEHTYVSTMNGAVYSGTRAAKIIQKHFG
SIO_010081: IR196_RS22860
subclass of: SO_0000673
so part of: IR196_RS22860
location: 22096..23325
location: region:22096-23325:1
so has part: feature:22096-23325:1:exon

WP_194532007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22096-23325:1:exon

IR196_RS22865
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22865
old locus tag: IR196_22865
so part of: sequence
location: 23386..23745
location: region:23386-23745:1
so has part: feature:23386-23745:1:exon
subclass of: SO_0000010

61318867
type: Gene
SIO_000068: ncbigene

position:23386:1
position: 23386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23745:1
position: 23745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23386-23745:1:exon

IR196_RS22865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22865
old locus tag: IR196_22865
inference: COORDINATES: protein motif:HMM:NF017690.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MIEFQAFSDSIGTKLPNVPTLKPGSLTAGQTETSKVLWSSPGDQFQVGIWECSVGKFPSTRPDMSEVCHVLTGRVEIEDEDGEKRLLKAGDTFVLARGWQGHWNVLEPLRKLYIFNREA
SIO_010081: IR196_RS22865
subclass of: SO_0000673
so part of: IR196_RS22865
location: 23386..23745
location: region:23386-23745:1
so has part: feature:23386-23745:1:exon

WP_194532008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23386-23745:1:exon

IR196_RS22870
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22870
old locus tag: IR196_22870
pseudo: true
so part of: sequence
location: complement(23954..>24130)
location: region:23954-24130:-1
so has part: feature:23954-24130:-1:exon
subclass of: SO_0000010

61318868
type: Gene
SIO_000068: ncbigene

position:23954:-1
position: 23954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24130:-1
position: 24130
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23954-24130:-1:exon

IR196_RS22870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22870
old locus tag: IR196_22870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611859.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: IR196_RS22870
subclass of: SO_0000673
so part of: IR196_RS22870
location: complement(23954..>24130)
location: region:23954-24130:-1
so has part: feature:23954-24130:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23954-24130:-1:exon

IR196_RS22875
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22875
old locus tag: IR196_22875
so part of: sequence
location: complement(24234..24872)
location: region:24234-24872:-1
so has part: feature:24234-24872:-1:exon
subclass of: SO_0000010

61318869
type: Gene
SIO_000068: ncbigene

position:24234:-1
position: 24234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24872:-1
position: 24872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24234-24872:-1:exon

IR196_RS22875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22875
old locus tag: IR196_22875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010543588.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MPDVLGYARVSTKDQDLEVQRRRLREEAGAIRIFEDVISGKTFERPGLAELLKFSRNGDIVCVVRLDRLGRSLKELLETVDDLKARGLAFRSLEERLDTSSAAGELIFHVFGAIAHFERRLIIERTRDGIAAAKARGKKLGRPPLDNDKLESALKLIDAGVRPAQVARQLGLGRSTLYRELADLKAKATATSTLSSELADQETPLSSTVTDR
SIO_010081: IR196_RS22875
subclass of: SO_0000673
so part of: IR196_RS22875
location: complement(24234..24872)
location: region:24234-24872:-1
so has part: feature:24234-24872:-1:exon

WP_194532009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24234-24872:-1:exon

IR196_RS22885
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22885
old locus tag: IR196_22885
so part of: sequence
location: complement(25372..25968)
location: region:25372-25968:-1
so has part: feature:25372-25968:-1:exon
subclass of: SO_0000010

61318871
type: Gene
SIO_000068: ncbigene

position:25372:-1
position: 25372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25968:-1
position: 25968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25372-25968:-1:exon

IR196_RS22885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22885
old locus tag: IR196_22885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007117839.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MKVEDEARKPNKASAYIGRQIRLRRQVRGMSLKDVASRAQLSIGLISQVERGLTAPSVQSMMAICEALEMPVRWLFDTPANPDAEENEIVVRHSKRRKLYYENGTFLKEIMTPDSQREIQMLRFVMQPGASSGEPYHNSEGNKCGLVLNGLFGLEIDKRQFQIGAGDSFAFPASADIRYWTVGDEPCEVIWIASPATV
SIO_010081: IR196_RS22885
subclass of: SO_0000673
so part of: IR196_RS22885
location: complement(25372..25968)
location: region:25372-25968:-1
so has part: feature:25372-25968:-1:exon

WP_194532010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25372-25968:-1:exon

IR196_RS22890
type: Gene
subclass of: SO_0000704
RO_0002162: 529
locus tag: IR196_RS22890
old locus tag: IR196_22890
so part of: sequence
location: 26109..27140
location: region:26109-27140:1
so has part: feature:26109-27140:1:exon
subclass of: SO_0000010

61318872
type: Gene
SIO_000068: ncbigene

position:26109:1
position: 26109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27140:1
position: 27140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26109-27140:1:exon

IR196_RS22890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 529
locus tag: IR196_RS22890
old locus tag: IR196_22890
inference: COORDINATES: protein motif:HMM:NF024808.2
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MGCKAVLIAVVTLGACASASSAQDFTIASWGGNYQEAQREAYFKPFASANGLNLAETTYLGGLAELQTMADTGKTVWDAVMMGSADLMLACDEGLLEEFDWSTVGNADKIPDEVKYECGVGNVVVATGIAYNSDGVNEPPKTADDFFNIEKWPGKRGIYNKPNSMLELALIADGVEPDKVYEVLATEEGVDRAFAKLDTIKAHAQFWSAGAQPVEWLVAGNVVMSTAFNGRIATARSEGKPLAFIWDHASLAIDGWAIPKGTPNRVAAFKFIDFVNAPESQAKFSDLYPYGPTNPEAESHITSKNVDTMPVGANIENAYYSNNAFWVEHLDALTERWNKWSAR
SIO_010081: IR196_RS22890
subclass of: SO_0000673
so part of: IR196_RS22890
location: 26109..27140
location: region:26109-27140:1
so has part: feature:26109-27140:1:exon

WP_210326927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26109-27140:1:exon