Azospirillum thiophilum strain BV-S chromosome 5, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Azospirillaceae; Azospirillum.
Complete Genome Sequence of a Strain of Azospirillum thiophilum Isolated from a Sulfide Spring
Submitted (14-AUG-2015) Research, New England Biolabs, 240 County Road, Ipswich, MA 01938, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP012405.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP/Quiver v. 2.3.0\nGenome Coverage :: 354\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/03/2023 03:50:49\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,765\nCDSs (total) :: 6,656\nGenes (coding) :: 6,569\nCDSs (with protein) :: 6,569\nGenes (RNA) :: 109\nrRNAs :: 8, 9, 9 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 9, 9 (5S, 16S, 23S)\ntRNAs :: 79\nncRNAs :: 4\nPseudo Genes (total) :: 87\nCDSs (without protein) :: 87\nPseudo Genes (ambiguous residues) :: 0 of 87\nPseudo Genes (frameshifted) :: 25 of 87\nPseudo Genes (incomplete) :: 66 of 87\nPseudo Genes (internal stop) :: 10 of 87\nPseudo Genes (multiple problems) :: 12 of 87\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
bacterial mat of the sulfide spring 'Shameless Bath'
Russia: Stavropol Krai, North Caucasus region
COORDINATES: similar to AA sequence:RefSeq:WP_012975451.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0015942 - formate metabolic process [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014187857.1
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: similar to AA sequence:RefSeq:WP_012975449.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012975446.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012975445.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014187978.1
COORDINATES: similar to AA sequence:RefSeq:WP_012202664.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975892.1
COORDINATES: similar to AA sequence:RefSeq:WP_008495477.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187982.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014187983.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014187984.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014187985.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188833.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188832.1
GO:0004802 - transketolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:NF014910.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198923.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014198922.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198921.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198920.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014198919.1
IclR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014199006.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976537.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976538.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189219.1
COORDINATES: protein motif:HMM:NF019335.2
TonB-dependent receptor plug domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_032492267.1
GO:0004803 - transposase activity [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014239655.1
COORDINATES: similar to AA sequence:RefSeq:WP_014239654.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977252.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012977253.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012977254.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977255.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977256.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977257.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612008.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF013752.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611219.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014200076.1
COORDINATES: similar to AA sequence:RefSeq:WP_014200075.1
TadE/TadG family type IV pilus assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_014200074.1
COORDINATES: similar to AA sequence:RefSeq:WP_014200073.1
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014200070.1
COORDINATES: similar to AA sequence:RefSeq:WP_008492861.1
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:NF021025.2
COORDINATES: similar to AA sequence:RefSeq:WP_014200065.1
type II and III secretion system protein family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014200064.1
COORDINATES: similar to AA sequence:RefSeq:WP_014200063.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014200062.1
COORDINATES: protein motif:HMM:NF025113.2
COORDINATES: similar to AA sequence:RefSeq:WP_014199550.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_014199551.1
COORDINATES: protein motif:HMM:NF014906.2
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
TetR/AcrR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR04025.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189221.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189222.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189223.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015614 - ABC-type D-xylose transporter activity [Evidence IEA]; GO:0033222 - xylose binding [Evidence IEA]
GO:0015753 - D-xylose transmembrane transport [Evidence IEA]
D-xylose ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020043992.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009045 - xylose isomerase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189225.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004856 - xylulokinase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0005997 - xylulose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189226.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014198410.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189228.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189229.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189230.1
GO:0042597 - periplasmic space [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189232.1
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:TIGR03980.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978307.1
50S ribosomal protein L11 methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004272274.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978305.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199267.1
GO:0043169 - cation binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189245.1
SCP2 sterol-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189246.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189247.1
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_008943592.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025042.2
COORDINATES: similar to AA sequence:RefSeq:WP_008946310.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
branched-chain amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249989.1
LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_014189441.1
GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
high-affinity branched-chain amino acid ABC transporter permease LivM
COORDINATES: similar to AA sequence:RefSeq:WP_014249988.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978041.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189438.1
COORDINATES: protein motif:HMM:TIGR01428.1
GO:0018784 - (S)-2-haloacid dehalogenase activity [Evidence IEA]
GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024739.2
COORDINATES: similar to AA sequence:RefSeq:WP_014188853.1
COORDINATES: protein motif:HMM:NF012738.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008494809.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF013353.2
GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
aspartate/glutamate racemase family protein
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: protein motif:HMM:NF013696.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189266.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189267.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:NF016819.2
COORDINATES: similar to AA sequence:RefSeq:WP_012976939.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0065003 - protein-containing complex assembly [Evidence IEA]
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_012976940.1
GO:0008901 - ferredoxin hydrogenase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
hydrogenase maturation nickel metallochaperone HypA
COORDINATES: similar to AA sequence:RefSeq:WP_014249322.1
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: similar to AA sequence:RefSeq:WP_012976942.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015499 - formate transmembrane transporter activity [Evidence IEA]
GO:0015724 - formate transport [Evidence IEA]
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249324.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249325.1
formate hydrogenlyase maturation HycH family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249326.1
GO:1990204 - oxidoreductase complex [Evidence IEA]
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
NADH-quinone oxidoreductase subunit B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976946.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
formate hydrogenlyase complex iron-sulfur subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014249328.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976948.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976949.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976950.1
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249332.1
respiratory chain complex I subunit 1 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976952.1
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249334.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0019645 - anaerobic electron transport chain [Evidence IEA]; GO:0009061 - anaerobic respiration [Evidence IEA]
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249336.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976955.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976956.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976957.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249339.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249340.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188879.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188663.1
COORDINATES: similar to AA sequence:RefSeq:WP_008944616.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014745649.1
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: similar to AA sequence:RefSeq:WP_014747588.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF014564.2
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019462102.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_012976843.1
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019013439.1
COORDINATES: similar to AA sequence:RefSeq:WP_008783891.1
taurine ABC transporter ATP-binding subunit
COORDINATES: protein motif:HMM:TIGR01729.1
GO:0015411 - ABC-type taurine transporter transporter activity [Evidence IEA]; GO:0030977 - taurine binding [Evidence IEA]
GO:0015734 - taurine transport [Evidence IEA]
taurine ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012382.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188889.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation/H(+) antiporter subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_014188888.1
GO:0015075 - monoatomic ion transmembrane transporter activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977247.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014197932.1
monovalent cation/H+ antiporter subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_014188885.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188884.1
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]
monovalent cation/H+ antiporter subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_014188883.1
GO:1902495 - transmembrane transporter complex [Evidence IEA]
GO:0016301 - kinase activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188882.1
GO:0016208 - AMP binding [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188881.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977240.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189077.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019462478.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424760.1
GO:0004053 - arginase activity [Evidence IEA]
GO:0019547 - arginine catabolic process to ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007424761.1
Lrp/AsnC family transcriptional regulator
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:NF012656.2
COORDINATES: protein motif:HMM:NF017532.2
phytanoyl-CoA dioxygenase family protein
COORDINATES: protein motif:HMM:NF019845.2
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008621365.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF014841.2
COORDINATES: protein motif:HMM:NF024771.2
COORDINATES: protein motif:HMM:NF012678.2
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0018506 - maleylacetate reductase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007423815.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198864.1
COORDINATES: similar to AA sequence:RefSeq:WP_019462851.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197649.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014189158.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199130.1
COORDINATES: similar to AA sequence:RefSeq:WP_020592799.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189157.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188002.1
GO:0004022 - alcohol dehydrogenase (NAD+) activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006066 - alcohol metabolic process [Evidence IEA]; GO:0015976 - carbon utilization [Evidence IEA]
bifunctional acetaldehyde-CoA/alcohol dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_018041137.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188414.1
twin-arginine translocation signal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977414.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188412.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977412.1
aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_014188410.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188409.1
aromatic/alkene monooxygenase hydroxylase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012977409.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977408.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188407.1
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012974179.1
ribbon-helix-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188393.1
(5-formylfuran-3-yl)methyl phosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_014188392.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188391.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242240.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188390.1
GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO:0046656 - folic acid biosynthetic process [Evidence IEA]; GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188389.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188388.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188387.1
quinoprotein dehydrogenase-associated putative ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188386.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188385.1
methanol/ethanol family PQQ-dependent dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014188384.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242233.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242223.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188381.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188380.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019654.2
GO:0018189 - pyrroloquinoline quinone biosynthetic process [Evidence IEA]
pyrroloquinoline quinone precursor peptide PqqA
COORDINATES: similar to AA sequence:RefSeq:WP_014188378.1
GO:0016840 - carbon-nitrogen lyase activity [Evidence IEA]
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014241333.1
PQQ-dependent catabolism-associated beta-propeller protein
COORDINATES: similar to AA sequence:RefSeq:WP_014242231.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188375.1
GO:0018493 - formylmethanofuran dehydrogenase activity [Evidence IEA]
GO:0015948 - methanogenesis [Evidence IEA]
formylmethanofuran dehydrogenase subunit C
COORDINATES: similar to AA sequence:RefSeq:WP_014188374.1
formylmethanofuran--tetrahydromethanopterin N-formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014188373.1
formylmethanofuran dehydrogenase subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_014188372.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188371.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188370.1
methylenetetrahydromethanopterin dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014188369.1
GO:0018759 - methenyltetrahydromethanopterin cyclohydrolase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
methenyltetrahydromethanopterin cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_014188368.1
triphosphoribosyl-dephospho-CoA synthase
COORDINATES: similar to AA sequence:RefSeq:WP_014188367.1
quinoprotein relay system zinc metallohydrolase 2
COORDINATES: similar to AA sequence:RefSeq:WP_014188366.1
quinoprotein dehydrogenase-associated SoxYZ-like carrier
COORDINATES: similar to AA sequence:RefSeq:WP_014188365.1
COORDINATES: similar to AA sequence:RefSeq:WP_008946289.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188364.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977092.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019200 - carbohydrate kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189170.1
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0019303 - D-ribose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189169.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977089.1
COORDINATES: similar to AA sequence:RefSeq:WP_011389955.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977087.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011389957.1
autoinducer 2 ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019462050.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189163.1
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014188360.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188359.1
acetyl-CoA C-acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014414475.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_012330183.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188992.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188991.1
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189004.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189005.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189006.1
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012976818.1
GO:0008776 - acetate kinase activity [Evidence IEA]
GO:0006083 - acetate metabolic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976817.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976816.1
GO:0004618 - phosphoglycerate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012973595.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014189010.1
COORDINATES: similar to AA sequence:RefSeq:WP_010505009.1
COORDINATES: protein motif:HMM:NF012596.2
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012226936.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014247281.1
COORDINATES: similar to AA sequence:RefSeq:WP_013521172.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189014.1
GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011632475.1
COORDINATES: similar to AA sequence:RefSeq:WP_011632474.1
COORDINATES: similar to AA sequence:RefSeq:WP_007091149.1
COORDINATES: similar to AA sequence:RefSeq:WP_012225646.1
COORDINATES: similar to AA sequence:RefSeq:WP_007091147.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198414.1
COORDINATES: similar to AA sequence:RefSeq:WP_014744179.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189016.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188840.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014241806.1
COORDINATES: similar to AA sequence:RefSeq:WP_014241807.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188838.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188837.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188836.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188835.1
COORDINATES: protein motif:HMM:NF015531.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189185.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189186.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189187.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189188.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189189.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189190.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189191.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189192.1
COORDINATES: similar to AA sequence:RefSeq:WP_008491940.1
COORDINATES: similar to AA sequence:RefSeq:WP_007089349.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189195.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189196.1
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_004274381.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189209.1
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189210.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189211.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189213.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242094.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189214.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189215.1
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_014242107.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014199761.1
GO:0008967 - phosphoglycolate phosphatase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0008152 - metabolic process [Evidence IEA]; GO:0009853 - photorespiration [Evidence IEA]
PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (PF00702); Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008495586.1
COORDINATES: similar to AA sequence:RefSeq:WP_019460962.1
COORDINATES: similar to AA sequence:RefSeq:WP_020594278.1
COORDINATES: protein motif:HMM:NF018066.2
acetoacetate decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014745653.1
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: similar to AA sequence:RefSeq:WP_008944275.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014240399.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF033580.1
COORDINATES: protein motif:HMM:NF016903.2
COORDINATES: protein motif:HMM:NF024880.2
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014200270.1
GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
HlyD family type I secretion periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014200271.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
peptidase domain-containing ABC transporter
COORDINATES: protein motif:HMM:NF025025.2
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF017263.2
COORDINATES: similar to AA sequence:RefSeq:WP_012978554.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019176.2
COORDINATES: protein motif:HMM:NF012573.2
GO:0005509 - calcium ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014190078.1
COORDINATES: similar to AA sequence:RefSeq:WP_007436816.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977425.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977426.1
COORDINATES: similar to AA sequence:RefSeq:WP_011385956.1
GO:0003985 - acetyl-CoA C-acetyltransferase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016246488.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977430.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189078.1
polysaccharide pyruvyl transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976974.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188230.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976741.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976742.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188227.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188226.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976265.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014189028.1
class I adenylate-forming enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189029.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189030.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189031.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189032.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189033.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189034.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189035.1
isocitrate lyase/PEP mutase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189036.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189037.1
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189038.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189039.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189040.1
COORDINATES: similar to AA sequence:RefSeq:WP_014248669.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188494.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188362.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189083.1
malate/lactate/ureidoglycolate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014189084.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976972.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189086.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976970.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189088.1
GO:0046914 - transition metal ion binding [Evidence IEA]
GO:0055072 - iron ion homeostasis [Evidence IEA]; GO:0006811 - monoatomic ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189089.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189090.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188822.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188821.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188820.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976964.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189091.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0046914 - transition metal ion binding [Evidence IEA]
manganese-binding transcriptional regulator MntR
COORDINATES: similar to AA sequence:RefSeq:WP_012976962.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250225.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250224.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189131.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976809.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189154.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188823.1
GO:0004497 - monooxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014744129.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977227.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977226.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189155.1
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_012976805.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976804.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197413.1
COORDINATES: protein motif:HMM:NF006050.0
COORDINATES: similar to AA sequence:RefSeq:WP_012976803.1
HPF/RaiA family ribosome-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976802.1
putative sulfate exporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_012554787.1
COORDINATES: similar to AA sequence:RefSeq:WP_007435461.1
COORDINATES: similar to AA sequence:RefSeq:WP_014241482.1
COORDINATES: protein motif:HMM:NF012245.2
GO:0098561 - methyl accepting chemotaxis protein complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012975308.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_012975309.1
GO:0030612 - arsenate reductase (thioredoxin) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189331.1
GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite, after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell, providing resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012976211.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012975312.1
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: protein motif:HMM:NF012385.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_014249986.1
COORDINATES: similar to AA sequence:RefSeq:WP_011385653.1
PhnD/SsuA/transferrin family substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011385652.1
COORDINATES: protein motif:HMM:TIGR04555.1
GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012264.2
COORDINATES: protein motif:HMM:TIGR04488.1
thiosulfate oxidation carrier protein SoxY
COORDINATES: protein motif:HMM:TIGR04490.1
thiosulfate oxidation carrier complex protein SoxZ
COORDINATES: protein motif:HMM:TIGR04484.1
GO:0070069 - cytochrome complex [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0016669 - oxidoreductase activity, acting on a sulfur group of donors, cytochrome as acceptor [Evidence IEA]
GO:0019417 - sulfur oxidation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04485.1
COORDINATES: similar to AA sequence:RefSeq:WP_019014877.1
GO:0030145 - manganese ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014672.2
COORDINATES: similar to AA sequence:RefSeq:WP_009542339.1
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_014189972.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976042.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: similar to AA sequence:RefSeq:WP_012976168.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187807.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976170.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199259.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976172.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187809.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004333 - fumarate hydratase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014187810.1
type II toxin-antitoxin system CcdA family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_014187811.1
COORDINATES: similar to AA sequence:RefSeq:WP_011386159.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976177.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976178.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187815.1
COORDINATES: protein motif:HMM:NF013868.2
GO:0043856 - anti-sigma factor antagonist activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976284.1
COORDINATES: similar to AA sequence:RefSeq:WP_008618098.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002725803.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976281.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976280.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976279.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976278.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]; GO:0050568 - protein-glutamine glutaminase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0018277 - protein deamination [Evidence IEA]; GO:0006482 - protein demethylation [Evidence IEA]
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: similar to AA sequence:RefSeq:WP_014187816.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198744.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187966.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187955.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197083.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187953.1
COORDINATES: similar to AA sequence:RefSeq:WP_007090212.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975681.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187950.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975679.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187948.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975677.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975676.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187945.1
COORDINATES: similar to AA sequence:RefSeq:WP_014743992.1
COORDINATES: protein motif:HMM:TIGR02118.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975661.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187943.1
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014187942.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_012975658.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187940.1
COORDINATES: similar to AA sequence:RefSeq:WP_014247717.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0097351 - toxin sequestering activity [Evidence IEA]
GO:0001558 - regulation of cell growth [Evidence IEA]
type II toxin-antitoxin system PrlF family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_008616460.1
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_014187818.1
COORDINATES: similar to AA sequence:RefSeq:WP_019644557.1
acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012975654.1
COORDINATES: similar to AA sequence:RefSeq:WP_014241701.1
carboxyl transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014187822.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187823.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187824.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187825.1
GO:0015293 - symporter activity [Evidence IEA]
bile acid:sodium symporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014187860.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975452.1