Allomeiothermus silvanus DSM 9946 plasmid pMESIL01, complete sequence.
Bacteria; Deinococcota; Deinococci; Thermales; Thermaceae; Allomeiothermus.
Complete genome sequence of Meiothermus silvanus type strain (VI-R2)
The complete plasmid1 of Meiothermus silvanus DSM 9946
Submitted (18-MAY-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP002043.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4083272\nSource DNA and organism available from Hans-Peter Klenk at the\nGerman Collection of Microorganisms and Cell Cultures (DSMZ)\n(hans-peter.klenk@dsmz.de)\nContacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)\n David Bruce (microbe@cuba.jgi-psf.org)\nWhole genome sequencing and draft assembly at JGI-PGF\nFinishing done by JGI-LANL\nAnnotation by JGI-ORNL and JGI-PGF\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Metadata-START##\nOrganism Display Name :: Meiothermus silvanus VI-R2, DSM 9946\nCulture Collection ID :: DSM 9946, ATCC 700542\nGOLD Stamp ID :: Gi02308\nFunding Program :: DOE-GEBA 2007\nGene Calling Method :: GeneMark\nIsolation Site :: Hot spring from Portugal\nIsolation Country :: Portugal\nOxygen Requirement :: Aerobe\nCell Shape :: Rod-shaped\nMotility :: Nonmotile\nTemperature Range :: Thermophile\nTemperature Optimum :: 50C\nBiotic Relationship :: Free living\nDiseases :: None\nHabitat :: Hot spring\n##Metadata-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/10/2023 13:49:00\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,757\nCDSs (total) :: 3,701\nGenes (coding) :: 3,621\nCDSs (with protein) :: 3,621\nGenes (RNA) :: 56\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 3\nPseudo Genes (total) :: 80\nCDSs (without protein) :: 80\nPseudo Genes (ambiguous residues) :: 0 of 80\nPseudo Genes (frameshifted) :: 25 of 80\nPseudo Genes (incomplete) :: 60 of 80\nPseudo Genes (internal stop) :: 4 of 80\nPseudo Genes (multiple problems) :: 8 of 80\nCRISPR Arrays :: 8\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_013159737.1
GO:0070069 - cytochrome complex [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0016669 - oxidoreductase activity, acting on a sulfur group of donors, cytochrome as acceptor [Evidence IEA]
GO:0019417 - sulfur oxidation [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018466180.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014510610.1
COORDINATES: similar to AA sequence:RefSeq:WP_018466178.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014629271.1
GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014629272.1
COORDINATES: similar to AA sequence:RefSeq:WP_011173460.1
cytochrome c biogenesis CcdA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013013081.1
COORDINATES: similar to AA sequence:RefSeq:WP_013013080.1
COORDINATES: similar to AA sequence:RefSeq:WP_015586431.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016329241.1
COORDINATES: similar to AA sequence:RefSeq:WP_014514686.1
COORDINATES: similar to AA sequence:RefSeq:WP_010888251.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF013544.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018466199.1
COORDINATES: similar to AA sequence:RefSeq:WP_015717309.1
COORDINATES: similar to AA sequence:RefSeq:WP_018466197.1
COORDINATES: similar to AA sequence:RefSeq:WP_018466196.1
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018466195.1
COORDINATES: similar to AA sequence:RefSeq:WP_013159735.1
COORDINATES: similar to AA sequence:RefSeq:WP_018110291.1
COORDINATES: protein motif:HMM:TIGR01439.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014510657.1
COORDINATES: similar to AA sequence:RefSeq:WP_003298407.1
COORDINATES: similar to AA sequence:RefSeq:WP_018467729.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018467727.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012173418.1
COORDINATES: similar to AA sequence:RefSeq:WP_018467725.1
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: protein motif:HMM:NF027968.2
alpha-glucosidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013703650.1
COORDINATES: similar to AA sequence:RefSeq:WP_019123674.1
GO:0005971 - ribonucleoside-diphosphate reductase complex [Evidence IEA]
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
class 1b ribonucleoside-diphosphate reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_001215827.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
class 1b ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013013254.1
GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013156564.1
IS701-like element ISMesi2 family transposase
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: similar to AA sequence:RefSeq:WP_013157183.1
GO:0004803 - transposase activity [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS3-like element ISMesi1 family transposase
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_014629656.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011228558.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014067076.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013159586.1
COORDINATES: similar to AA sequence:RefSeq:WP_013012838.1
COORDINATES: similar to AA sequence:RefSeq:WP_018466404.1
COORDINATES: similar to AA sequence:RefSeq:WP_016329929.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
class II fructose-1,6-bisphosphate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_015717868.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016329931.1
COORDINATES: similar to AA sequence:RefSeq:WP_018438897.1
COORDINATES: similar to AA sequence:RefSeq:WP_013159594.1
ribulose bisphosphate carboxylase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019631190.1
form I ribulose bisphosphate carboxylase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018466106.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013015120.1
COORDINATES: similar to AA sequence:RefSeq:WP_013013802.1
COORDINATES: similar to AA sequence:RefSeq:WP_016329938.1
COORDINATES: similar to AA sequence:RefSeq:WP_018466114.1
COORDINATES: similar to AA sequence:RefSeq:WP_018466115.1
COORDINATES: similar to AA sequence:RefSeq:WP_018466116.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018466118.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018714814.1
COORDINATES: protein motif:HMM:TIGR00305.1
GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
putative toxin-antitoxin system toxin component, PIN family
COORDINATES: similar to AA sequence:RefSeq:WP_015717109.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008633604.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_008633605.1
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_012284173.1
COORDINATES: similar to AA sequence:RefSeq:WP_015065413.1
COORDINATES: similar to AA sequence:RefSeq:WP_018112001.1
COORDINATES: similar to AA sequence:RefSeq:WP_015716963.1
COORDINATES: protein motif:HMM:NF012885.2
COORDINATES: similar to AA sequence:RefSeq:WP_006634736.1
COORDINATES: similar to AA sequence:RefSeq:WP_018467730.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611780.1
COORDINATES: protein motif:HMM:NF017416.2
COORDINATES: similar to AA sequence:RefSeq:WP_012694882.1
COORDINATES: similar to AA sequence:RefSeq:WP_012694883.1
COORDINATES: protein motif:HMM:NF016873.2
COORDINATES: similar to AA sequence:RefSeq:WP_019587708.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_020879769.1
COORDINATES: similar to AA sequence:RefSeq:WP_007539306.1
COORDINATES: similar to AA sequence:RefSeq:WP_011391473.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_018182957.1
COORDINATES: similar to AA sequence:RefSeq:WP_007539300.1
COORDINATES: similar to AA sequence:RefSeq:WP_013528424.1
COORDINATES: similar to AA sequence:RefSeq:WP_020642290.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018467573.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013458597.1
COORDINATES: similar to AA sequence:RefSeq:WP_018467570.1
COORDINATES: similar to AA sequence:RefSeq:WP_013013056.1
COORDINATES: similar to AA sequence:RefSeq:WP_018112091.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013159637.1
COORDINATES: similar to AA sequence:RefSeq:WP_018467749.1
COORDINATES: similar to AA sequence:RefSeq:WP_010884048.1
COORDINATES: similar to AA sequence:RefSeq:WP_014683995.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013012777.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_008337301.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0004783 - sulfite reductase (NADPH) activity [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
NADPH-dependent assimilatory sulfite reductase hemoprotein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018466817.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_018466818.1
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase
COORDINATES: similar to AA sequence:RefSeq:WP_015436059.1
COORDINATES: similar to AA sequence:RefSeq:WP_019426156.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015419 - ABC-type sulfate transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
sulfate ABC transporter permease subunit CysW
COORDINATES: similar to AA sequence:RefSeq:WP_019011922.1
sulfate ABC transporter permease subunit CysT
COORDINATES: similar to AA sequence:RefSeq:WP_018309147.1
sulfate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012256586.1
GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018466821.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004604 - phosphoadenylyl-sulfate reductase (thioredoxin) activity [Evidence IEA]
GO:0019379 - sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018466822.1
GO:0004020 - adenylylsulfate kinase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018466823.1
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: protein motif:HMM:TIGR03062.1
COORDINATES: similar to AA sequence:RefSeq:WP_003048718.1
COORDINATES: similar to AA sequence:RefSeq:WP_017871902.1
COORDINATES: similar to AA sequence:RefSeq:WP_013158416.1
GO:0015074 - DNA integration [Evidence IEA]
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014344537.1
COORDINATES: similar to AA sequence:RefSeq:WP_011941904.1
COORDINATES: similar to AA sequence:RefSeq:WP_007422469.1
COORDINATES: similar to AA sequence:RefSeq:WP_015100402.1
COORDINATES: similar to AA sequence:RefSeq:WP_013157186.1
COORDINATES: protein motif:HMM:NF033543.1
COORDINATES: similar to AA sequence:RefSeq:WP_018461971.1
COORDINATES: similar to AA sequence:RefSeq:WP_013157733.1
GO:0015031 - protein transport [Evidence IEA]
twin-arginine translocase TatA/TatE family subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015056804.1
COORDINATES: similar to AA sequence:RefSeq:WP_014515433.1
COORDINATES: similar to AA sequence:RefSeq:WP_008631952.1
COORDINATES: similar to AA sequence:RefSeq:WP_018466608.1
COORDINATES: similar to AA sequence:RefSeq:WP_018466609.1
COORDINATES: similar to AA sequence:RefSeq:WP_018467259.1
phosphoribosylamine--glycine ligase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015065240.1
COORDINATES: similar to AA sequence:RefSeq:WP_015065239.1
COORDINATES: protein motif:HMM:NF025253.2
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: similar to AA sequence:RefSeq:WP_015231162.1
COORDINATES: similar to AA sequence:RefSeq:WP_019551615.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019551614.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014514488.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016329262.1
COORDINATES: similar to AA sequence:RefSeq:WP_019551597.1
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
GO:0030163 - protein catabolic process [Evidence IEA]
BREX system Lon protease-like protein BrxL
COORDINATES: similar to AA sequence:RefSeq:WP_019551596.1
COORDINATES: similar to AA sequence:RefSeq:WP_013013524.1
COORDINATES: protein motif:HMM:NF025141.2
COORDINATES: similar to AA sequence:RefSeq:WP_013013510.1
COORDINATES: similar to AA sequence:RefSeq:WP_019551602.1
COORDINATES: similar to AA sequence:RefSeq:WP_019551601.1
COORDINATES: similar to AA sequence:RefSeq:WP_019551600.1
GO:0004386 - helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014514491.1
COORDINATES: protein motif:HMM:NF022182.2
COORDINATES: similar to AA sequence:RefSeq:WP_014629170.1
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019551576.1
COORDINATES: similar to AA sequence:RefSeq:WP_013157393.1
COORDINATES: similar to AA sequence:RefSeq:WP_013159697.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013013741.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-C CRISPR-associated endonuclease Cas1c
COORDINATES: similar to AA sequence:RefSeq:WP_018465592.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013013743.1
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: protein motif:HMM:NF021006.2
TIGR02221 family CRISPR-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_013013744.1
type III-B CRISPR module RAMP protein Cmr6
COORDINATES: similar to AA sequence:RefSeq:WP_013013745.1
type III-B CRISPR module-associated protein Cmr5
COORDINATES: similar to AA sequence:RefSeq:WP_018465589.1
type III-B CRISPR module RAMP protein Cmr4
COORDINATES: similar to AA sequence:RefSeq:WP_018465588.1
GO:0005575 - cellular_component [Evidence IEA]
type III-B CRISPR module-associated protein Cmr3
COORDINATES: similar to AA sequence:RefSeq:WP_018465587.1
type III-B CRISPR-associated protein Cas10/Cmr2
COORDINATES: similar to AA sequence:RefSeq:WP_013013749.1
type III-B CRISPR module RAMP protein Cmr1
COORDINATES: similar to AA sequence:RefSeq:WP_018465585.1
type I-C CRISPR-associated protein Cas7/Csd2
COORDINATES: similar to AA sequence:RefSeq:WP_013013751.1
type I-C CRISPR-associated protein Cas8c/Csd1
COORDINATES: similar to AA sequence:RefSeq:WP_018465583.1
type I-C CRISPR-associated protein Cas5c
COORDINATES: similar to AA sequence:RefSeq:WP_018465582.1
CRISPR-associated helicase/endonuclease Cas3
COORDINATES: similar to AA sequence:RefSeq:WP_018465581.1
COORDINATES: similar to AA sequence:RefSeq:WP_013159926.1
COORDINATES: similar to AA sequence:RefSeq:WP_013159927.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:NF024770.2
COORDINATES: similar to AA sequence:RefSeq:WP_012173247.1
COORDINATES: similar to AA sequence:RefSeq:WP_012173246.1
COORDINATES: similar to AA sequence:RefSeq:WP_018106052.1
COORDINATES: similar to AA sequence:RefSeq:WP_012173244.1
sugar ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF025180.2
COORDINATES: similar to AA sequence:RefSeq:WP_017744808.1
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013457919.1
GO:0015837 - amine transport [Evidence IEA]
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013704252.1
COORDINATES: similar to AA sequence:RefSeq:WP_003047712.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018466671.1
COORDINATES: similar to AA sequence:RefSeq:WP_018466669.1
COORDINATES: similar to AA sequence:RefSeq:WP_013012533.1
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013704767.1
GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013012536.1
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013013539.1
COORDINATES: similar to AA sequence:RefSeq:WP_013013538.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016330319.1
COORDINATES: similar to AA sequence:RefSeq:WP_015065483.1
COORDINATES: similar to AA sequence:RefSeq:WP_013013333.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018467724.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014511178.1
COORDINATES: similar to AA sequence:RefSeq:WP_018466194.1
COORDINATES: similar to AA sequence:RefSeq:WP_018466181.1
COORDINATES: similar to AA sequence:RefSeq:WP_011173467.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018466183.1
GO:0030145 - manganese ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018461387.1
COORDINATES: similar to AA sequence:RefSeq:WP_018461386.1
COORDINATES: similar to AA sequence:RefSeq:WP_013159742.1
thiosulfate oxidation carrier complex protein SoxZ
COORDINATES: similar to AA sequence:RefSeq:WP_014514999.1
thiosulfate oxidation carrier protein SoxY
COORDINATES: similar to AA sequence:RefSeq:WP_018466188.1
COORDINATES: similar to AA sequence:RefSeq:WP_014516363.1
COORDINATES: similar to AA sequence:RefSeq:WP_018465454.1
COORDINATES: similar to AA sequence:RefSeq:WP_008990540.1
COORDINATES: similar to AA sequence:RefSeq:WP_019551380.1
COORDINATES: protein motif:HMM:NF019303.2
COORDINATES: protein motif:HMM:NF014542.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_018465093.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: similar to AA sequence:RefSeq:WP_018462043.1
COORDINATES: similar to AA sequence:RefSeq:WP_018465091.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
COORDINATES: similar to AA sequence:RefSeq:WP_008339500.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF037660.2
COORDINATES: similar to AA sequence:RefSeq:WP_011565860.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019009214.1
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_018466227.1
COORDINATES: similar to AA sequence:RefSeq:WP_013156793.1
COORDINATES: protein motif:HMM:NF022072.2
COORDINATES: similar to AA sequence:RefSeq:WP_009358741.1
COORDINATES: similar to AA sequence:RefSeq:WP_003575842.1
COORDINATES: protein motif:HMM:NF015649.2
BTAD domain-containing putative transcriptional regulator
COORDINATES: protein motif:HMM:NF019346.2
COORDINATES: similar to AA sequence:RefSeq:WP_013159830.1
COORDINATES: protein motif:HMM:NF013938.2
COORDINATES: similar to AA sequence:RefSeq:WP_013013515.1
COORDINATES: similar to AA sequence:RefSeq:WP_018465316.1
COORDINATES: similar to AA sequence:RefSeq:WP_018465317.1
COORDINATES: similar to AA sequence:RefSeq:WP_014684061.1
COORDINATES: protein motif:HMM:NF014567.2
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_012970372.1
GO:0031004 - potassium ion-transporting ATPase complex [Evidence IEA]
GO:0008556 - P-type potassium transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
potassium-transporting ATPase subunit KdpA
COORDINATES: similar to AA sequence:RefSeq:WP_008684650.1
potassium-transporting ATPase subunit KdpB
COORDINATES: similar to AA sequence:RefSeq:WP_004861018.1
potassium-transporting ATPase subunit KdpC
COORDINATES: similar to AA sequence:RefSeq:WP_006527293.1
COORDINATES: protein motif:HMM:NF023742.2
COORDINATES: protein motif:HMM:NF018933.2
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013013303.1
nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013013304.1
COORDINATES: similar to AA sequence:RefSeq:WP_013013308.1
helix-hairpin-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013449725.1
COORDINATES: similar to AA sequence:RefSeq:WP_013158287.1
COORDINATES: protein motif:HMM:NF024589.2
COORDINATES: similar to AA sequence:RefSeq:WP_018110732.1
COORDINATES: similar to AA sequence:RefSeq:WP_018110731.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_018466797.1
COORDINATES: similar to AA sequence:RefSeq:WP_018466796.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018466795.1
COORDINATES: similar to AA sequence:RefSeq:WP_013159788.1
COORDINATES: similar to AA sequence:RefSeq:WP_018466793.1
COORDINATES: similar to AA sequence:RefSeq:WP_018466792.1
COORDINATES: similar to AA sequence:RefSeq:WP_018466791.1
DevR family CRISPR-associated autoregulator
COORDINATES: similar to AA sequence:RefSeq:WP_013159792.1
COORDINATES: similar to AA sequence:RefSeq:WP_018466789.1
CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6
COORDINATES: similar to AA sequence:RefSeq:WP_013157954.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013157225.1
COORDINATES: similar to AA sequence:RefSeq:WP_013157215.1
COORDINATES: similar to AA sequence:RefSeq:WP_013158189.1
COORDINATES: similar to AA sequence:RefSeq:WP_003936881.1
excalibur calcium-binding domain-containing protein
COORDINATES: protein motif:HMM:NF024731.2
COORDINATES: similar to AA sequence:RefSeq:WP_013012887.1
COORDINATES: similar to AA sequence:RefSeq:WP_020736158.1
COORDINATES: similar to AA sequence:RefSeq:WP_011172707.1
COORDINATES: similar to AA sequence:RefSeq:WP_018465888.1
COORDINATES: similar to AA sequence:RefSeq:WP_013159902.1
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: similar to AA sequence:RefSeq:WP_015052217.1
COORDINATES: protein motif:HMM:NF013068.2
COORDINATES: protein motif:HMM:NF012692.2