Pseudochaenichthys georgianus chromosome 23, fPseGeo1.1, whole genome shotgun sequence.
type: Entry
definition: Pseudochaenichthys georgianus chromosome 23, fPseGeo1.1, whole genome shotgun sequence.
sequence version: NC_047525.1
sequence date: 2020-05-06
sequence: sequence
division: CON
label: NC_047525.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA629555
dblink: SAMEA104132832
keyword: WGS
keyword: RefSeq
source: Pseudochaenichthys georgianus (South Georgia icefish)
organism: Pseudochaenichthys georgianus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Channichthyidae; Pseudochaenichthys.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR792568.1.\nAssembly name: fPseGeo1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the SC on 2020/04/15. The\noriginal whole-genome shotgun project has the accession\nCADEHP000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Pseudochaenichthys georgianus\n Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 25555492
topology: linear
so has quality: SO_0000987
location: 1..25555492
location: region:1-25555492:1
RO_0002162: 52239

NC_047525
type: RefSeq
SIO_000068: refseq

PRJNA629555
type: BioProject
SIO_000068: bioproject

SAMEA104132832
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25555492:1
position: 25555492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-25555492:1:source
so part of: sequence
organism: Pseudochaenichthys georgianus
mol type: genomic DNA
chromosome: 23

52239
type: Taxonomy
SIO_000068: taxonomy

LOC117439164
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 81600..153248
location: region:81600-153248:1
so has part: feature:81600-153248:1:exon
subclass of: SO_0000010

117439164
type: Gene
SIO_000068: ncbigene

position:81600:1
position: 81600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153248:1
position: 153248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81600-153248:1:exon

LOC117439164
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439164
product: pleckstrin homology domain-containing family A member 5-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034074936.1
SIO_010081: LOC117439164
subclass of: SO_0000673
so part of: LOC117439164
location: join(81600..81647,82097..82180,85932..85985,98134..98302,99644..99748,104015..104087,107450..107550,112215..112330,113320..114429,117905..118191,119050..119284,120790..120873,121554..121673,125516..125569,129769..129849,133748..133810,133890..133970,134066..134215,137969..138070,138151..138259,138374..138420,142941..143139,143497..143617,143907..144040,145728..145919,146174..146284,146404..146487,148100..148239,149681..149826,152632..153248)
location: region:81600-153248:1
so has part: feature:81600-81647:1:exon
so has part: feature:82097-82180:1:exon
so has part: feature:85932-85985:1:exon
so has part: feature:98134-98302:1:exon
so has part: feature:99644-99748:1:exon
so has part: feature:104015-104087:1:exon
so has part: feature:107450-107550:1:exon
so has part: feature:112215-112330:1:exon
so has part: feature:113320-114429:1:exon
so has part: feature:117905-118191:1:exon
so has part: feature:119050-119284:1:exon
so has part: feature:120790-120873:1:exon
so has part: feature:121554-121673:1:exon
so has part: feature:125516-125569:1:exon
so has part: feature:129769-129849:1:exon
so has part: feature:133748-133810:1:exon
so has part: feature:133890-133970:1:exon
so has part: feature:134066-134215:1:exon
so has part: feature:137969-138070:1:exon
so has part: feature:138151-138259:1:exon
so has part: feature:138374-138420:1:exon
so has part: feature:142941-143139:1:exon
so has part: feature:143497-143617:1:exon
so has part: feature:143907-144040:1:exon
so has part: feature:145728-145919:1:exon
so has part: feature:146174-146284:1:exon
so has part: feature:146404-146487:1:exon
so has part: feature:148100-148239:1:exon
so has part: feature:149681-149826:1:exon
so has part: feature:152632-153248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81600-81647:1:exon

position:81647:1
position: 81647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:82097-82180:1:exon

position:82097:1
position: 82097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82180:1
position: 82180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:85932-85985:1:exon

position:85932:1
position: 85932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85985:1
position: 85985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:98134-98302:1:exon

position:98134:1
position: 98134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98302:1
position: 98302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:99644-99748:1:exon

position:99644:1
position: 99644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99748:1
position: 99748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:104015-104087:1:exon

position:104015:1
position: 104015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104087:1
position: 104087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:107450-107550:1:exon

position:107450:1
position: 107450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107550:1
position: 107550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:112215-112330:1:exon

position:112215:1
position: 112215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112330:1
position: 112330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:113320-114429:1:exon

position:113320:1
position: 113320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114429:1
position: 114429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:117905-118191:1:exon

position:117905:1
position: 117905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118191:1
position: 118191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:119050-119284:1:exon

position:119050:1
position: 119050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119284:1
position: 119284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:120790-120873:1:exon

position:120790:1
position: 120790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120873:1
position: 120873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:121554-121673:1:exon

position:121554:1
position: 121554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121673:1
position: 121673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:125516-125569:1:exon

position:125516:1
position: 125516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125569:1
position: 125569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:129769-129849:1:exon

position:129769:1
position: 129769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129849:1
position: 129849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:133748-133810:1:exon

position:133748:1
position: 133748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133810:1
position: 133810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:133890-133970:1:exon

position:133890:1
position: 133890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133970:1
position: 133970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:134066-134215:1:exon

position:134066:1
position: 134066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134215:1
position: 134215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:137969-138070:1:exon

position:137969:1
position: 137969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138070:1
position: 138070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:138151-138259:1:exon

position:138151:1
position: 138151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138259:1
position: 138259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:138374-138420:1:exon

position:138374:1
position: 138374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138420:1
position: 138420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:142941-143139:1:exon

position:142941:1
position: 142941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143139:1
position: 143139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:143497-143617:1:exon

position:143497:1
position: 143497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143617:1
position: 143617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:143907-144040:1:exon

position:143907:1
position: 143907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144040:1
position: 144040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:145728-145919:1:exon

position:145728:1
position: 145728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145919:1
position: 145919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:146174-146284:1:exon

position:146174:1
position: 146174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146284:1
position: 146284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:146404-146487:1:exon

position:146404:1
position: 146404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146487:1
position: 146487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:148100-148239:1:exon

position:148100:1
position: 148100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148239:1
position: 148239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:149681-149826:1:exon

position:149681:1
position: 149681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149826:1
position: 149826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:152632-153248:1:exon

position:152632:1
position: 152632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117439164
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439164
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: pleckstrin homology domain-containing family A member 5-like
translation: MLWWTHNERKVTCKHPVSGAPSQDNCIFVVNEHTNDGKLVHPDTPIEALSRPAAKASSDQGSDQKERPTSTMSEASNYTGGSDYSTFPGSPPTHAPSTTLSSTSSTRPSRSSKKIHNFGKRSNSIKRNPNAPGMKSSWLYKQDSTGMKLWKKRWFVLCDMCLFYYRDDKEDSILGSILLPSFHVSMLSVDDHISRKYAFKATHPNMRTYYFCTDTAKEMESWMKVMTDAALVHSEPVRRLDKLKVDQRAPQELNNLLNHRVLTQPEIQNNERNREPVRQHSLSQADDKRHKDLEKHNGQREYYTLQREGERYSLKKDGMSYMLDKDGERYFLQKDGEKYMLRKDGEKFLLQKDGEVCAMHKDLEKYAVQSVDGRCTVKEEKYAPCEDAEKYLLTKEREKYALQKLGDRHTLQKDGHKYPPQKEVRRQLSLKETGRHGMMREMENKYGTIQVVDKYGTLKEVKKYSTLREGDRYATLRDAGKYATVRGGDRYGFQRDPSAERALAQFSSLQLQPAQAAAIAAAVSASRQSHAHLSVHGPPQPNGPGPAATGHSGDCSPSEGDSSLAMAPGTSPVPVQEPERGLSRTNSMKQLEHWVRTQKTRGLDEDTRSVTSYQTLPRNMPSHRALMVPRYPEGYRTLPRNSLARPDSICSAADSLYDRALRPASTSTGIMVERRRSMRDDTMWQLYEWQQRQAFSKQTLAMPTAGGHYGTLPSAKTMGNISEHVAHSIPPSPSHGSLALYSTLPPPRQQAPHNPSSSHSEVSSPVFRRETPDPWHRTLPAKHGYTVDRRSIAGGVPPPSITPQSLQGKTPEELTLLLIKLRRQQAEISSLREHTVSQLMALGLEGPNAKTDVLSHHLQRNLIYLDSQTKENEPLIFMIHTMIENSAPRPQLYQQVSPGDHKEGSFIQRTEEPDIDTKLSRLCEQDRAVRLQEEKLQQLHREKHTLETALLSASQELSEHSGNNGAAQSLLQQRDTLQSGLLSTCRELGRVTTELERSWGEYDRLGADVTLAKSTLLEQLEALGSPQTEPPSQRHIQIQKELWRIQDVMEALAKNKPQRSTDNTGVPASRPLSSLQKNEADTLLPLSPLKEADSVPPRPPLPQYYTQQSAPPNMPPYHSHPGGRLQPQTHRPEDRKAGSRNGVHSQNPDYRLYKSEPELTTVKEELDEANGEDKDKAESSDTASKVPPTAPSCPVGIIPPRTKSPMSPLESSTIASYVTLRKTKKPEPRSERPHSAVDQTSFGEREWGRTRMSVEEQLERMRRNQEASSLREKKRETPSRSPSFSKDNPALIQQGRGQMEGACADPVQLEAALQQLKVETMEQSRTHPAPEEVQGGEECEEVPQDGEGPLQGEAELQDELCVSQRVVIVDLCAEPQRVEIVNPFEDDESREQDLTSSPTNTTTENSFQTPEPETPSPEPREEEAEERQQREEELKERLTADHKKHNNNNNNMLASQTFTLVSSDT
SIO_010081: LOC117439164
subclass of: SO_0000673
so part of: LOC117439164
location: join(81634..81647,82097..82180,85932..85985,98134..98302,99644..99748,104015..104087,107450..107550,112215..112330,113320..114429,117905..118191,119050..119284,120790..120873,121554..121673,125516..125569,129769..129849,133748..133810,133890..133970,134066..134215,137969..138070,138151..138259,138374..138420,142941..143139,143497..143617,143907..144040,145728..145919,146174..146284,146404..146487,148100..148239,149681..149826,152632..152666)
location: region:81634-152666:1
so has part: feature:81634-81647:1:exon
so has part: feature:82097-82180:1:exon
so has part: feature:85932-85985:1:exon
so has part: feature:98134-98302:1:exon
so has part: feature:99644-99748:1:exon
so has part: feature:104015-104087:1:exon
so has part: feature:107450-107550:1:exon
so has part: feature:112215-112330:1:exon
so has part: feature:113320-114429:1:exon
so has part: feature:117905-118191:1:exon
so has part: feature:119050-119284:1:exon
so has part: feature:120790-120873:1:exon
so has part: feature:121554-121673:1:exon
so has part: feature:125516-125569:1:exon
so has part: feature:129769-129849:1:exon
so has part: feature:133748-133810:1:exon
so has part: feature:133890-133970:1:exon
so has part: feature:134066-134215:1:exon
so has part: feature:137969-138070:1:exon
so has part: feature:138151-138259:1:exon
so has part: feature:138374-138420:1:exon
so has part: feature:142941-143139:1:exon
so has part: feature:143497-143617:1:exon
so has part: feature:143907-144040:1:exon
so has part: feature:145728-145919:1:exon
so has part: feature:146174-146284:1:exon
so has part: feature:146404-146487:1:exon
so has part: feature:148100-148239:1:exon
so has part: feature:149681-149826:1:exon
so has part: feature:152632-152666:1:exon

XP_033930827.1
type: Protein
SIO_000068: ncbiprotein

position:81634:1
position: 81634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152666:1
position: 152666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81634-81647:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82097-82180:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85932-85985:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98134-98302:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99644-99748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:104015-104087:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107450-107550:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:112215-112330:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:113320-114429:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:117905-118191:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:119050-119284:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:120790-120873:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:121554-121673:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:125516-125569:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:129769-129849:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:133748-133810:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:133890-133970:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:134066-134215:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:137969-138070:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:138151-138259:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:138374-138420:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:142941-143139:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:143497-143617:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:143907-144040:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:145728-145919:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:146174-146284:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:146404-146487:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:148100-148239:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:149681-149826:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:152632-152666:1:exon

aebp2
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: aebp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 161778..182434
location: region:161778-182434:1
so has part: feature:161778-182434:1:exon
subclass of: SO_0000010

117439341
type: Gene
SIO_000068: ncbigene

position:161778:1
position: 161778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182434:1
position: 182434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161778-182434:1:exon

aebp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: aebp2
product: AE binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_034075247.1
SIO_010081: aebp2
subclass of: SO_0000673
so part of: aebp2
location: join(161778..162424,179533..179761,180213..180320,180405..180591,180690..180814,181176..181243,181795..181908,181989..182434)
location: region:161778-182434:1
so has part: feature:161778-162424:1:exon
so has part: feature:179533-179761:1:exon
so has part: feature:180213-180320:1:exon
so has part: feature:180405-180591:1:exon
so has part: feature:180690-180814:1:exon
so has part: feature:181176-181243:1:exon
so has part: feature:181795-181908:1:exon
so has part: feature:181989-182434:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:161778-162424:1:exon

position:162424:1
position: 162424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179533-179761:1:exon

position:179533:1
position: 179533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179761:1
position: 179761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:180213-180320:1:exon

position:180213:1
position: 180213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180320:1
position: 180320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:180405-180591:1:exon

position:180405:1
position: 180405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180591:1
position: 180591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:180690-180814:1:exon

position:180690:1
position: 180690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180814:1
position: 180814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:181176-181243:1:exon

position:181176:1
position: 181176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181243:1
position: 181243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:181795-181908:1:exon

position:181795:1
position: 181795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181908:1
position: 181908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:181989-182434:1:exon

position:181989:1
position: 181989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

aebp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: aebp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein AEBP2
translation: MAQITSEGAEQDSQPTSNQNGTGVTAETGNEGQAVPDPKQEPGDNNENRAGMDASGRGVAAEDGDSLSSVSDADKQTALPNKNPDNDGGEPDGKLSEPGKSPAQGSLASSTDSAQEGSRVLRQEQREGESVSSSSPAHRTKSTEKAEHGTKRAASMEGTSSIGEPLSRMDSEDSISSTLMDMDSTASSGRSTPATLNGHCGGAGSGSTAVGGGKSLSYTCCWDHCQLLFPSSPDLAEHIRATHVDGQRGGVFVCMWKGCKVYNTPSTSQSWLQRHMLTHSGDKPFKCVVGGCNATFASQGGLARHVPTHFSSQSSSKVSNLGKLKEESPSKAGLNKRRKLKNKHKRSLPRPHDFFDAQTMDAIRHRAICLNLATHIESLGNGHSVVFHSTVIARRKEDSGKVKVLLHWTPEDMLPDVWVNEGDRLQQKTKVVHLSKLPTDTTVLLDPNIYRMFF
SIO_010081: aebp2
subclass of: SO_0000673
so part of: aebp2
location: join(161904..162424,179533..179761,180213..180320,180405..180591,180690..180814,181176..181243,181795..181908,181989..182001)
location: region:161904-182001:1
so has part: feature:161904-162424:1:exon
so has part: feature:179533-179761:1:exon
so has part: feature:180213-180320:1:exon
so has part: feature:180405-180591:1:exon
so has part: feature:180690-180814:1:exon
so has part: feature:181176-181243:1:exon
so has part: feature:181795-181908:1:exon
so has part: feature:181989-182001:1:exon

XP_033931138.1
type: Protein
SIO_000068: ncbiprotein

position:161904:1
position: 161904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182001:1
position: 182001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161904-162424:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179533-179761:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:180213-180320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180405-180591:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180690-180814:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181176-181243:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:181795-181908:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:181989-182001:1:exon

ndufa5
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: ndufa5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 184135..187455
location: region:184135-187455:1
so has part: feature:184135-187455:1:exon
subclass of: SO_0000010

117439368
type: Gene
SIO_000068: ncbigene

position:184135:1
position: 184135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187455:1
position: 187455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184135-187455:1:exon

ndufa5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: ndufa5
product: NADH:ubiquinone oxidoreductase subunit A5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_034075279.1
SIO_010081: ndufa5
subclass of: SO_0000673
so part of: ndufa5
location: join(184135..184201,186043..186087,186469..186585,186895..186960,187256..187455)
location: region:184135-187455:1
so has part: feature:184135-184201:1:exon
so has part: feature:186043-186087:1:exon
so has part: feature:186469-186585:1:exon
so has part: feature:186895-186960:1:exon
so has part: feature:187256-187455:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:184135-184201:1:exon

position:184201:1
position: 184201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:186043-186087:1:exon

position:186043:1
position: 186043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186087:1
position: 186087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:186469-186585:1:exon

position:186469:1
position: 186469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186585:1
position: 186585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:186895-186960:1:exon

position:186895:1
position: 186895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186960:1
position: 186960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:187256-187455:1:exon

position:187256:1
position: 187256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ndufa5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: ndufa5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
translation: MAGLLKKTTGLVGLAVSHNPHERLRSLYSKILASLQTMPQDAAYRKYTEQLVGERFNHVQSEPDVEKLENKINCGQIEEVIFQAECELSLARKMSEWKPWEPLIEEPPTNQWKWPV
SIO_010081: ndufa5
subclass of: SO_0000673
so part of: ndufa5
location: join(184181..184201,186043..186087,186469..186585,186895..186960,187256..187357)
location: region:184181-187357:1
so has part: feature:184181-184201:1:exon
so has part: feature:186043-186087:1:exon
so has part: feature:186469-186585:1:exon
so has part: feature:186895-186960:1:exon
so has part: feature:187256-187357:1:exon

XP_033931170.1
type: Protein
SIO_000068: ncbiprotein

position:184181:1
position: 184181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187357:1
position: 187357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184181-184201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186043-186087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186469-186585:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186895-186960:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187256-187357:1:exon

cog5
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: cog5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(187449..264213)
location: region:187449-264213:-1
so has part: feature:187449-264213:-1:exon
subclass of: SO_0000010

117439366
type: Gene
SIO_000068: ncbigene

position:187449:-1
position: 187449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264213:-1
position: 264213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187449-264213:-1:exon

cog5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: cog5
product: component of oligomeric golgi complex 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_034075274.1
SIO_010081: cog5
subclass of: SO_0000673
so part of: cog5
location: complement(join(187449..187890,188336..188415,188523..188649,189398..189474,190330..190567,193205..193299,193681..193743,197520..197630,197812..197911,198587..198748,199551..199755,204684..204765,212261..212338,212421..212533,213522..213681,216587..216717,236736..236856,243811..243880,244689..244743,256184..256241,259404..259543,264037..264213))
location: region:187449-264213:-1
so has part: feature:264037-264213:-1:exon
so has part: feature:259404-259543:-1:exon
so has part: feature:256184-256241:-1:exon
so has part: feature:244689-244743:-1:exon
so has part: feature:243811-243880:-1:exon
so has part: feature:236736-236856:-1:exon
so has part: feature:216587-216717:-1:exon
so has part: feature:213522-213681:-1:exon
so has part: feature:212421-212533:-1:exon
so has part: feature:212261-212338:-1:exon
so has part: feature:204684-204765:-1:exon
so has part: feature:199551-199755:-1:exon
so has part: feature:198587-198748:-1:exon
so has part: feature:197812-197911:-1:exon
so has part: feature:197520-197630:-1:exon
so has part: feature:193681-193743:-1:exon
so has part: feature:193205-193299:-1:exon
so has part: feature:190330-190567:-1:exon
so has part: feature:189398-189474:-1:exon
so has part: feature:188523-188649:-1:exon
so has part: feature:188336-188415:-1:exon
so has part: feature:187449-187890:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264037-264213:-1:exon

position:264037:-1
position: 264037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:259404-259543:-1:exon

position:259404:-1
position: 259404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259543:-1
position: 259543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:256184-256241:-1:exon

position:256184:-1
position: 256184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256241:-1
position: 256241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:244689-244743:-1:exon

position:244689:-1
position: 244689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244743:-1
position: 244743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:243811-243880:-1:exon

position:243811:-1
position: 243811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243880:-1
position: 243880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:236736-236856:-1:exon

position:236736:-1
position: 236736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236856:-1
position: 236856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:216587-216717:-1:exon

position:216587:-1
position: 216587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216717:-1
position: 216717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:213522-213681:-1:exon

position:213522:-1
position: 213522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213681:-1
position: 213681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:212421-212533:-1:exon

position:212421:-1
position: 212421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212533:-1
position: 212533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:212261-212338:-1:exon

position:212261:-1
position: 212261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212338:-1
position: 212338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:204684-204765:-1:exon

position:204684:-1
position: 204684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204765:-1
position: 204765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:199551-199755:-1:exon

position:199551:-1
position: 199551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199755:-1
position: 199755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:198587-198748:-1:exon

position:198587:-1
position: 198587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198748:-1
position: 198748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:197812-197911:-1:exon

position:197812:-1
position: 197812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197911:-1
position: 197911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:197520-197630:-1:exon

position:197520:-1
position: 197520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197630:-1
position: 197630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:193681-193743:-1:exon

position:193681:-1
position: 193681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193743:-1
position: 193743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:193205-193299:-1:exon

position:193205:-1
position: 193205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193299:-1
position: 193299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:190330-190567:-1:exon

position:190330:-1
position: 190330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190567:-1
position: 190567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:189398-189474:-1:exon

position:189398:-1
position: 189398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189474:-1
position: 189474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:188523-188649:-1:exon

position:188523:-1
position: 188523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188649:-1
position: 188649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:188336-188415:-1:exon

position:188336:-1
position: 188336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188415:-1
position: 188415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:187449-187890:-1:exon

position:187890:-1
position: 187890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cog5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: cog5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: conserved oligomeric Golgi complex subunit 5
translation: MENGREGSTNSLLKDGCYADFLVEDFDVKTYTAQAIQHAVLAEQLGRLAQGISQLDKELHSQVVARHEDLLSQATGIESLEGVLQMMQTRISALQAAVDRIRTKIVDPYNKIVARITQLARLQVACDLLRRIIRILYLSKRLQGQLQGGSREITKAAQSLNELDYLSQGVDLSGIEVIENDLLLISRARLEVENQAKRLLEQGMEIQNPTQVGTALQVFYNLGSLRETISSVVGGYRTTIKDNINSALDIKGLTQPTNPRAAPGRAVLPTPGNTAAFRAALWTHLEKLMDQICAACRQVQHLQKVLLKKRDPVTHVCFIDEIIKDGQPDILYTFWTDVTSTLSEEFHRATEASSFLKQAFEGEYPKLLRLYNELWRRLQQYSASLQGALTSGAGIEASLDISATESDTQDLFTHGKQDYSPEKALKDSLQPYESAYLSKSLSRLFDPINLVFPMGGRNPPSNDELDSIIKTISSELNVASVDPNLALAVSKNVAKTVQLFCVKSEQLLCTQGECSQVIGPLTEGQRRNVAVVNSLYRLQQAVNKIVSGPGVCAPPAAEALSSCLEVLMSSAVQPLLQSVSDSIEAIIITLHQEDFSGPLSNPDKPDVPCSLYMKELQGFISRVMADYFRHFQCVDFIYESTESIAQRAIELFIRHSSLLRPLGEGGKMRLAADCAQMELAVAPLCRRVSDLGKPYRMLRSFRPLLFQSSELISSSLAVGELFPCSTLLHFFFTRAPPELKSPHQRAEWSVARYSQWLDDHPSERDRLSLIRGALEAYVQAVRARQGKEFAPIYPIMLQLLQRGSSV
SIO_010081: cog5
subclass of: SO_0000673
so part of: cog5
location: complement(join(187782..187890,188336..188415,188523..188649,189398..189474,190330..190567,193205..193299,193681..193743,197520..197630,197812..197911,198587..198748,199551..199755,204684..204765,212261..212338,212421..212533,213522..213681,216587..216717,236736..236856,243811..243880,244689..244743,256184..256241,259404..259543,264037..264082))
location: region:187782-264082:-1
so has part: feature:264037-264082:-1:exon
so has part: feature:259404-259543:-1:exon
so has part: feature:256184-256241:-1:exon
so has part: feature:244689-244743:-1:exon
so has part: feature:243811-243880:-1:exon
so has part: feature:236736-236856:-1:exon
so has part: feature:216587-216717:-1:exon
so has part: feature:213522-213681:-1:exon
so has part: feature:212421-212533:-1:exon
so has part: feature:212261-212338:-1:exon
so has part: feature:204684-204765:-1:exon
so has part: feature:199551-199755:-1:exon
so has part: feature:198587-198748:-1:exon
so has part: feature:197812-197911:-1:exon
so has part: feature:197520-197630:-1:exon
so has part: feature:193681-193743:-1:exon
so has part: feature:193205-193299:-1:exon
so has part: feature:190330-190567:-1:exon
so has part: feature:189398-189474:-1:exon
so has part: feature:188523-188649:-1:exon
so has part: feature:188336-188415:-1:exon
so has part: feature:187782-187890:-1:exon

XP_033931165.1
type: Protein
SIO_000068: ncbiprotein

position:187782:-1
position: 187782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264082:-1
position: 264082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264037-264082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:259404-259543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:256184-256241:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244689-244743:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:243811-243880:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236736-236856:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216587-216717:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213522-213681:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212421-212533:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:212261-212338:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:204684-204765:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:199551-199755:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:198587-198748:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:197812-197911:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:197520-197630:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:193681-193743:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:193205-193299:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:190330-190567:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:189398-189474:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:188523-188649:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:188336-188415:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:187782-187890:-1:exon

LOC117439367
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439367
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 222248..228892
location: region:222248-228892:1
so has part: feature:222248-228892:1:exon
subclass of: SO_0000010

117439367
type: Gene
SIO_000068: ncbigene

position:222248:1
position: 222248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228892:1
position: 228892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222248-228892:1:exon

LOC117439367
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439367
product: G-protein coupled receptor 22-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034075276.1
SIO_010081: LOC117439367
subclass of: SO_0000673
so part of: LOC117439367
location: join(222248..222511,223526..224298,225900..226047,226268..226414,227537..228892)
location: region:222248-228892:1
so has part: feature:222248-222511:1:exon
so has part: feature:223526-224298:1:exon
so has part: feature:225900-226047:1:exon
so has part: feature:226268-226414:1:exon
so has part: feature:227537-228892:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:222248-222511:1:exon

position:222511:1
position: 222511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:223526-224298:1:exon

position:223526:1
position: 223526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224298:1
position: 224298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:225900-226047:1:exon

position:225900:1
position: 225900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226047:1
position: 226047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:226268-226414:1:exon

position:226268:1
position: 226268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226414:1
position: 226414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:227537-228892:1:exon

position:227537:1
position: 227537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117439367
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439367
product: G-protein coupled receptor 22-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034075278.1
SIO_010081: LOC117439367
subclass of: SO_0000673
so part of: LOC117439367
location: join(222248..222511,223526..224298,225900..226047,226355..226414,227537..228892)
location: region:222248-228892:1
so has part: feature:222248-222511:1:exon
so has part: feature:223526-224298:1:exon
so has part: feature:225900-226047:1:exon
so has part: feature:226355-226414:1:exon
so has part: feature:227537-228892:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:222248-222511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223526-224298:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225900-226047:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226355-226414:1:exon

position:226355:1
position: 226355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:227537-228892:1:exon

LOC117439367
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439367
product: G-protein coupled receptor 22-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034075277.1
SIO_010081: LOC117439367
subclass of: SO_0000673
so part of: LOC117439367
location: join(222248..222511,225900..226047,226268..226414,227537..228892)
location: region:222248-228892:1
so has part: feature:222248-222511:1:exon
so has part: feature:225900-226047:1:exon
so has part: feature:226268-226414:1:exon
so has part: feature:227537-228892:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:222248-222511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225900-226047:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:226268-226414:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:227537-228892:1:exon

LOC117439367
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439367
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 22-like isoform X1
translation: MHTPPVWFSADTMSNMTVLDTAADPYDLDMTSDKAIYPVSFQVSLTGFLVLEIVLGLSSNLTVLVLYCMKQNLISSVSNIITMNLHVVDVLVCVCCIPLTAVVVLLPLEADTAMICCFHEACVSFASVATASTILAITVDRYDILVRPANRVLTMGRAVVLLGSIWALSFFSFLVPFMEVGFFINSDSEFVNQTAVVTVSHTNEYYTELGLYYHLLAQIPIFFFTALVMLVTYYKILQALNIRIGTRFQHSLPKKTQKSKNTISLSTATQVESTDASQSSTGVRAGGTAPLGMRASVSVIIAIRRAVKRHRERRERQRRVFKMSLLIISTFLLCWTPITVLNTILLSTGPSDLTVCLRLGFLVMAYGTTIFHPLLYAFTRQKFQKVLKSKMKKRMASVVEADPTPNNVVIHNSWTDPRRNKKVTFKDTEARQKCLCSQDIE
SIO_010081: LOC117439367
subclass of: SO_0000673
so part of: LOC117439367
location: join(225922..226047,226268..226414,227537..228589)
location: region:225922-228589:1
so has part: feature:225922-226047:1:exon
so has part: feature:226268-226414:1:exon
so has part: feature:227537-228589:1:exon

XP_033931167.1
type: Protein
SIO_000068: ncbiprotein

position:225922:1
position: 225922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228589:1
position: 228589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225922-226047:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:226268-226414:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227537-228589:1:exon

LOC117439367
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439367
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 22-like isoform X1
translation: MHTPPVWFSADTMSNMTVLDTAADPYDLDMTSDKAIYPVSFQVSLTGFLVLEIVLGLSSNLTVLVLYCMKQNLISSVSNIITMNLHVVDVLVCVCCIPLTAVVVLLPLEADTAMICCFHEACVSFASVATASTILAITVDRYDILVRPANRVLTMGRAVVLLGSIWALSFFSFLVPFMEVGFFINSDSEFVNQTAVVTVSHTNEYYTELGLYYHLLAQIPIFFFTALVMLVTYYKILQALNIRIGTRFQHSLPKKTQKSKNTISLSTATQVESTDASQSSTGVRAGGTAPLGMRASVSVIIAIRRAVKRHRERRERQRRVFKMSLLIISTFLLCWTPITVLNTILLSTGPSDLTVCLRLGFLVMAYGTTIFHPLLYAFTRQKFQKVLKSKMKKRMASVVEADPTPNNVVIHNSWTDPRRNKKVTFKDTEARQKCLCSQDIE
SIO_010081: LOC117439367
subclass of: SO_0000673
so part of: LOC117439367
location: join(225922..226047,226268..226414,227537..228589)
location: region:225922-228589:1
so has part: feature:225922-226047:1:exon
so has part: feature:226268-226414:1:exon
so has part: feature:227537-228589:1:exon

XP_033931168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225922-226047:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:226268-226414:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227537-228589:1:exon

LOC117439367
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439367
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 22-like isoform X2
translation: MHTPPVWFSADTMSNMTVLDTAADPYDLDMTSDKAIYPVSFQNLISSVSNIITMNLHVVDVLVCVCCIPLTAVVVLLPLEADTAMICCFHEACVSFASVATASTILAITVDRYDILVRPANRVLTMGRAVVLLGSIWALSFFSFLVPFMEVGFFINSDSEFVNQTAVVTVSHTNEYYTELGLYYHLLAQIPIFFFTALVMLVTYYKILQALNIRIGTRFQHSLPKKTQKSKNTISLSTATQVESTDASQSSTGVRAGGTAPLGMRASVSVIIAIRRAVKRHRERRERQRRVFKMSLLIISTFLLCWTPITVLNTILLSTGPSDLTVCLRLGFLVMAYGTTIFHPLLYAFTRQKFQKVLKSKMKKRMASVVEADPTPNNVVIHNSWTDPRRNKKVTFKDTEARQKCLCSQDIE
SIO_010081: LOC117439367
subclass of: SO_0000673
so part of: LOC117439367
location: join(225922..226047,226355..226414,227537..228589)
location: region:225922-228589:1
so has part: feature:225922-226047:1:exon
so has part: feature:226355-226414:1:exon
so has part: feature:227537-228589:1:exon

XP_033931169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225922-226047:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:226355-226414:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227537-228589:1:exon

LOC117468456
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117468456
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 282871..>292330
location: region:282871-292330:1
so has part: feature:282871-292330:1:exon
subclass of: SO_0000010

117468456
type: Gene
SIO_000068: ncbigene

position:282871:1
position: 282871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292330:1
position: 292330
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282871-292330:1:exon

LOC117468456
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117468456
product: craniofacial development protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_034112582.1
SIO_010081: LOC117468456
subclass of: SO_0000673
so part of: LOC117468456
location: join(282871..283818,292322..>292330)
location: region:282871-292330:1
so has part: feature:282871-283818:1:exon
so has part: feature:292322-292330:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282871-283818:1:exon

position:283818:1
position: 283818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:292322-292330:1:exon

position:292322:1
position: 292322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117468456
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117468456
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: craniofacial development protein 2-like
translation: MKNKVIPNPILPTAGVRRNIAADGGAGPPSGGQHDDRTPNQQGGVLSDHSTPSNALMRYRSPFVMGTFNACTVREEARLVELAHCAEERGVEILGIQEHRRVHTDDRIVYRRVERCTFITVSAWRNQAQAATGGVGLMLGPLARKALRLVYHHTDRILIAEFSGNPVTTVIVVYSPTSVAPSEEVEKFYEDLATAVRDVPAHNFLAILGDFNARLGPEDAPYPYHDSTNRNGAYLMALLMEHELLAANTIFRKRTGKRWTQVDRATGMLRQLDYILVRQKWRNSILNAEPYSTFSSVGSDNSVVSMRVRLSLRVPRQSS
SIO_010081: LOC117468456
subclass of: SO_0000673
so part of: LOC117468456
location: join(282871..283818,292322..>292330)
location: region:282871-292330:1
so has part: feature:282871-283818:1:exon
so has part: feature:292322-292330:1:exon

XP_033968473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282871-283818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292322-292330:1:exon

caprin2
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: caprin2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 321752..348411
location: region:321752-348411:1
so has part: feature:321752-348411:1:exon
subclass of: SO_0000010

117468354
type: Gene
SIO_000068: ncbigene

position:321752:1
position: 321752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348411:1
position: 348411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321752-348411:1:exon

caprin2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: caprin2
product: caprin family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034112417.1
SIO_010081: caprin2
subclass of: SO_0000673
so part of: caprin2
location: join(321752..321874,325511..325779,325854..325916,326016..326102,326586..326824,330163..330245,330968..331087,331196..331227,331355..331531,334877..334915,334997..335125,335246..335330,336043..336092,336182..336289,336373..336471,336543..336677,345697..345841,345927..345988,346742..346790,347266..348411)
location: region:321752-348411:1
so has part: feature:321752-321874:1:exon
so has part: feature:325511-325779:1:exon
so has part: feature:325854-325916:1:exon
so has part: feature:326016-326102:1:exon
so has part: feature:326586-326824:1:exon
so has part: feature:330163-330245:1:exon
so has part: feature:330968-331087:1:exon
so has part: feature:331196-331227:1:exon
so has part: feature:331355-331531:1:exon
so has part: feature:334877-334915:1:exon
so has part: feature:334997-335125:1:exon
so has part: feature:335246-335330:1:exon
so has part: feature:336043-336092:1:exon
so has part: feature:336182-336289:1:exon
so has part: feature:336373-336471:1:exon
so has part: feature:336543-336677:1:exon
so has part: feature:345697-345841:1:exon
so has part: feature:345927-345988:1:exon
so has part: feature:346742-346790:1:exon
so has part: feature:347266-348411:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:321752-321874:1:exon

position:321874:1
position: 321874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:325511-325779:1:exon

position:325511:1
position: 325511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325779:1
position: 325779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:325854-325916:1:exon

position:325854:1
position: 325854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325916:1
position: 325916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:326016-326102:1:exon

position:326016:1
position: 326016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326102:1
position: 326102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:326586-326824:1:exon

position:326586:1
position: 326586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326824:1
position: 326824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:330163-330245:1:exon

position:330163:1
position: 330163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330245:1
position: 330245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:330968-331087:1:exon

position:330968:1
position: 330968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331087:1
position: 331087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:331196-331227:1:exon

position:331196:1
position: 331196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331227:1
position: 331227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:331355-331531:1:exon

position:331355:1
position: 331355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331531:1
position: 331531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:334877-334915:1:exon

position:334877:1
position: 334877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334915:1
position: 334915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:334997-335125:1:exon

position:334997:1
position: 334997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335125:1
position: 335125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:335246-335330:1:exon

position:335246:1
position: 335246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335330:1
position: 335330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:336043-336092:1:exon

position:336043:1
position: 336043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336092:1
position: 336092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:336182-336289:1:exon

position:336182:1
position: 336182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336289:1
position: 336289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:336373-336471:1:exon

position:336373:1
position: 336373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336471:1
position: 336471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:336543-336677:1:exon

position:336543:1
position: 336543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336677:1
position: 336677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:345697-345841:1:exon

position:345697:1
position: 345697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345841:1
position: 345841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:345927-345988:1:exon

position:345927:1
position: 345927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345988:1
position: 345988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:346742-346790:1:exon

position:346742:1
position: 346742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346790:1
position: 346790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:347266-348411:1:exon

position:347266:1
position: 347266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

caprin2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: caprin2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2
translation: MVHLSPSPNLDVTPPEHLKDGEDRRRDLVVADGPKGGSPLGLSTQQLSMETSTVYYGYDLYIEDGLICLKNKVRNLEKKKLKLEDYKRRLTWGEELNHDQMAAAEKYEEVLHHLAFAQELHKTLDELTQNLLRAQRKAVRKDKVAKVDTERRNLTSVLHFQHLLHIMQLEHIRTDLLAGRNQAPLITAQQLQSLSQLATLLGVKRDHTLSLEEQMERAAVAHLDLLEGKDKPVAGSTYKLFKEELAELMSCKYFTCLPSPPINPAKESLRAHSHSPIATSNPKEVSKENWKGGFQTRERVPPDCWDQDSSVGPCPPPAAVHRPWRGAATFIPKGSVTTKKQSAGCKQRKRRAKGVRPANSAGYMDMPLELFNSTYALPKDPFLRKQHLEDLVTKIHGSFSFMQDSLLEGEISPINVHQKLKQRSSKSPSPLGHADLGSPVDVLPKEMHSTPLPPRLIERRASKTNGDQCLETSALKVPSLDLPHEPRQLAERKGFPSPPLYRREATIPVSLEKSCAYTPESKKHPPCSRVESCTVNLPQGRTFSTPPSRRTLTSSQFQNIQQVFKVNATFSQNGEFKYKPDSSVFAEPRYSIASTQTPAEFFPPEDELQPGGSYIPQTHLRDCGPTFYAARDAGYHHGHRCGGGNLSAAWSDSSQVSTPDREGAFTIVDSGQGDSLSVSTMEVPLSPHGDHQALLPMQLYPLSQPLRVAFNASRTANFAPGNLDQPIAFDQLHSNLGEMFDTSMGRFTSPVNGTYVFLFHILKLAINVPLYINLMRNEEVMVSAYANDGAPDHETASNHAILPLFQGDQVWLRLHRGAIYGSTWKYSTFSGFLLYQDST
SIO_010081: caprin2
subclass of: SO_0000673
so part of: caprin2
location: join(325540..325779,325854..325916,326016..326102,326586..326824,330163..330245,330968..331087,331196..331227,331355..331531,334877..334915,334997..335125,335246..335330,336043..336092,336182..336289,336373..336471,336543..336677,345697..345841,345927..345988,346742..346790,347266..347843)
location: region:325540-347843:1
so has part: feature:325540-325779:1:exon
so has part: feature:325854-325916:1:exon
so has part: feature:326016-326102:1:exon
so has part: feature:326586-326824:1:exon
so has part: feature:330163-330245:1:exon
so has part: feature:330968-331087:1:exon
so has part: feature:331196-331227:1:exon
so has part: feature:331355-331531:1:exon
so has part: feature:334877-334915:1:exon
so has part: feature:334997-335125:1:exon
so has part: feature:335246-335330:1:exon
so has part: feature:336043-336092:1:exon
so has part: feature:336182-336289:1:exon
so has part: feature:336373-336471:1:exon
so has part: feature:336543-336677:1:exon
so has part: feature:345697-345841:1:exon
so has part: feature:345927-345988:1:exon
so has part: feature:346742-346790:1:exon
so has part: feature:347266-347843:1:exon

XP_033968308.1
type: Protein
SIO_000068: ncbiprotein

position:325540:1
position: 325540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347843:1
position: 347843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325540-325779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325854-325916:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326016-326102:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326586-326824:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:330163-330245:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330968-331087:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331196-331227:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:331355-331531:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:334877-334915:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:334997-335125:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:335246-335330:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:336043-336092:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:336182-336289:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:336373-336471:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:336543-336677:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:345697-345841:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:345927-345988:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:346742-346790:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:347266-347843:1:exon

LOC117439304
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 357204..361902
location: region:357204-361902:1
so has part: feature:357204-361902:1:exon
subclass of: SO_0000010

117439304
type: Gene
SIO_000068: ncbigene

position:357204:1
position: 357204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361902:1
position: 361902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357204-361902:1:exon

LOC117439304
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 52239
gene: LOC117439304
product: chromodomain-helicase-DNA-binding protein 8-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004551141.1
SIO_010081: LOC117439304
so part of: LOC117439304
location: join(357204..357245,357327..357438,359265..359363,359860..359971,360172..360329,360467..360621,361766..361902)
location: region:357204-361902:1
so has part: feature:357204-357245:1:exon
so has part: feature:357327-357438:1:exon
so has part: feature:359265-359363:1:exon
so has part: feature:359860-359971:1:exon
so has part: feature:360172-360329:1:exon
so has part: feature:360467-360621:1:exon
so has part: feature:361766-361902:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:357204-357245:1:exon

position:357245:1
position: 357245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:357327-357438:1:exon

position:357327:1
position: 357327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357438:1
position: 357438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359265-359363:1:exon

position:359265:1
position: 359265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359363:1
position: 359363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:359860-359971:1:exon

position:359860:1
position: 359860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359971:1
position: 359971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:360172-360329:1:exon

position:360172:1
position: 360172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360329:1
position: 360329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:360467-360621:1:exon

position:360467:1
position: 360467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360621:1
position: 360621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:361766-361902:1:exon

position:361766:1
position: 361766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117439304
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439304
product: chromodomain-helicase-DNA-binding protein 8-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_034075194.1
SIO_010081: LOC117439304
subclass of: SO_0000673
so part of: LOC117439304
location: join(357204..357245,357327..357438,359265..359363,359860..359971,360179..360329,360467..360621,361766..361902)
location: region:357204-361902:1
so has part: feature:357204-357245:1:exon
so has part: feature:357327-357438:1:exon
so has part: feature:359265-359363:1:exon
so has part: feature:359860-359971:1:exon
so has part: feature:360179-360329:1:exon
so has part: feature:360467-360621:1:exon
so has part: feature:361766-361902:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:357204-357245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:357327-357438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359265-359363:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359860-359971:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:360179-360329:1:exon

position:360179:1
position: 360179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:360467-360621:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:361766-361902:1:exon

LOC117439304
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 8-like
translation: MTCSSVRHRFGQSKAVKVYRLITRNYEREMLDKASLKLGLDRPVLQSMSGNNNGPVQQFSKKEIEDLLRKGAYAAIMDENDEGHRFC
SIO_010081: LOC117439304
subclass of: SO_0000673
so part of: LOC117439304
location: join(359961..359971,360179..360329,360467..360568)
location: region:359961-360568:1
so has part: feature:359961-359971:1:exon
so has part: feature:360179-360329:1:exon
so has part: feature:360467-360568:1:exon

XP_033931085.1
type: Protein
SIO_000068: ncbiprotein

position:359961:1
position: 359961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360568:1
position: 360568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359961-359971:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360179-360329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360467-360568:1:exon

LOC117439305
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439305
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(364645..366128)
location: region:364645-366128:-1
so has part: feature:364645-366128:-1:exon
subclass of: SO_0000011

117439305
type: Gene
SIO_000068: ncbigene

position:364645:-1
position: 364645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366128:-1
position: 366128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364645-366128:-1:exon

LOC117439305
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117439305
product: uncharacterized LOC117439305, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_004551143.1
SIO_010081: LOC117439305
subclass of: SO_0000673
so part of: LOC117439305
location: complement(join(364645..364792,365000..365111,365608..365706,365894..366005,366087..366128))
location: region:364645-366128:-1
so has part: feature:366087-366128:-1:exon
so has part: feature:365894-366005:-1:exon
so has part: feature:365608-365706:-1:exon
so has part: feature:365000-365111:-1:exon
so has part: feature:364645-364792:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366087-366128:-1:exon

position:366087:-1
position: 366087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:365894-366005:-1:exon

position:365894:-1
position: 365894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366005:-1
position: 366005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:365608-365706:-1:exon

position:365608:-1
position: 365608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365706:-1
position: 365706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:365000-365111:-1:exon

position:365000:-1
position: 365000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365111:-1
position: 365111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:364645-364792:-1:exon

position:364792:-1
position: 364792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439305
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117439305
product: uncharacterized LOC117439305, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_004551142.1
SIO_010081: LOC117439305
subclass of: SO_0000673
so part of: LOC117439305
location: complement(join(364645..364799,365000..365111,365608..365706,365894..366005,366087..366128))
location: region:364645-366128:-1
so has part: feature:366087-366128:-1:exon
so has part: feature:365894-366005:-1:exon
so has part: feature:365608-365706:-1:exon
so has part: feature:365000-365111:-1:exon
so has part: feature:364645-364799:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366087-366128:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:365894-366005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365608-365706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:365000-365111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:364645-364799:-1:exon

position:364799:-1
position: 364799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ipo8
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: ipo8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 439971..501133
location: region:439971-501133:1
so has part: feature:439971-501133:1:exon
subclass of: SO_0000010

117468438
type: Gene
SIO_000068: ncbigene

position:439971:1
position: 439971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501133:1
position: 501133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439971-501133:1:exon

ipo8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: ipo8
product: importin 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_034112530.1
SIO_010081: ipo8
subclass of: SO_0000673
so part of: ipo8
location: join(439971..440328,459359..459440,459611..459767,460000..460158,461017..461173,462955..463044,464089..464183,464274..464358,464555..464689,466189..466288,478912..478988,481466..481582,481695..481784,483290..483455,487671..487831,488609..488734,488823..488898,491204..491329,491959..492056,492151..492246,492577..492797,494118..494323,495862..496095,498676..498799,500664..501133)
location: region:439971-501133:1
so has part: feature:439971-440328:1:exon
so has part: feature:459359-459440:1:exon
so has part: feature:459611-459767:1:exon
so has part: feature:460000-460158:1:exon
so has part: feature:461017-461173:1:exon
so has part: feature:462955-463044:1:exon
so has part: feature:464089-464183:1:exon
so has part: feature:464274-464358:1:exon
so has part: feature:464555-464689:1:exon
so has part: feature:466189-466288:1:exon
so has part: feature:478912-478988:1:exon
so has part: feature:481466-481582:1:exon
so has part: feature:481695-481784:1:exon
so has part: feature:483290-483455:1:exon
so has part: feature:487671-487831:1:exon
so has part: feature:488609-488734:1:exon
so has part: feature:488823-488898:1:exon
so has part: feature:491204-491329:1:exon
so has part: feature:491959-492056:1:exon
so has part: feature:492151-492246:1:exon
so has part: feature:492577-492797:1:exon
so has part: feature:494118-494323:1:exon
so has part: feature:495862-496095:1:exon
so has part: feature:498676-498799:1:exon
so has part: feature:500664-501133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:439971-440328:1:exon

position:440328:1
position: 440328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:459359-459440:1:exon

position:459359:1
position: 459359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459440:1
position: 459440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:459611-459767:1:exon

position:459611:1
position: 459611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459767:1
position: 459767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:460000-460158:1:exon

position:460000:1
position: 460000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460158:1
position: 460158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:461017-461173:1:exon

position:461017:1
position: 461017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461173:1
position: 461173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:462955-463044:1:exon

position:462955:1
position: 462955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463044:1
position: 463044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:464089-464183:1:exon

position:464089:1
position: 464089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464183:1
position: 464183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:464274-464358:1:exon

position:464274:1
position: 464274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464358:1
position: 464358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:464555-464689:1:exon

position:464555:1
position: 464555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464689:1
position: 464689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:466189-466288:1:exon

position:466189:1
position: 466189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466288:1
position: 466288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:478912-478988:1:exon

position:478912:1
position: 478912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478988:1
position: 478988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:481466-481582:1:exon

position:481466:1
position: 481466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481582:1
position: 481582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:481695-481784:1:exon

position:481695:1
position: 481695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481784:1
position: 481784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:483290-483455:1:exon

position:483290:1
position: 483290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483455:1
position: 483455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:487671-487831:1:exon

position:487671:1
position: 487671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487831:1
position: 487831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:488609-488734:1:exon

position:488609:1
position: 488609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488734:1
position: 488734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:488823-488898:1:exon

position:488823:1
position: 488823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488898:1
position: 488898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:491204-491329:1:exon

position:491204:1
position: 491204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491329:1
position: 491329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:491959-492056:1:exon

position:491959:1
position: 491959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492056:1
position: 492056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:492151-492246:1:exon

position:492151:1
position: 492151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492246:1
position: 492246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:492577-492797:1:exon

position:492577:1
position: 492577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492797:1
position: 492797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:494118-494323:1:exon

position:494118:1
position: 494118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494323:1
position: 494323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:495862-496095:1:exon

position:495862:1
position: 495862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496095:1
position: 496095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:498676-498799:1:exon

position:498676:1
position: 498676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498799:1
position: 498799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:500664-501133:1:exon

position:500664:1
position: 500664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ipo8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: ipo8
product: importin 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_034112531.1
SIO_010081: ipo8
subclass of: SO_0000673
so part of: ipo8
location: join(439971..440328,459359..459440,459611..459767,460000..460158,461017..461173,462955..463044,464089..464183,464274..464358,464555..464689,466189..466288,478912..478988,481466..481582,481695..481784,483290..483455,487671..487831,488609..488734,488823..488889,491204..491329,491959..492056,492151..492246,492577..492797,494118..494323,495862..496095,498676..498799,500664..501133)
location: region:439971-501133:1
so has part: feature:439971-440328:1:exon
so has part: feature:459359-459440:1:exon
so has part: feature:459611-459767:1:exon
so has part: feature:460000-460158:1:exon
so has part: feature:461017-461173:1:exon
so has part: feature:462955-463044:1:exon
so has part: feature:464089-464183:1:exon
so has part: feature:464274-464358:1:exon
so has part: feature:464555-464689:1:exon
so has part: feature:466189-466288:1:exon
so has part: feature:478912-478988:1:exon
so has part: feature:481466-481582:1:exon
so has part: feature:481695-481784:1:exon
so has part: feature:483290-483455:1:exon
so has part: feature:487671-487831:1:exon
so has part: feature:488609-488734:1:exon
so has part: feature:488823-488889:1:exon
so has part: feature:491204-491329:1:exon
so has part: feature:491959-492056:1:exon
so has part: feature:492151-492246:1:exon
so has part: feature:492577-492797:1:exon
so has part: feature:494118-494323:1:exon
so has part: feature:495862-496095:1:exon
so has part: feature:498676-498799:1:exon
so has part: feature:500664-501133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:439971-440328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459359-459440:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459611-459767:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460000-460158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:461017-461173:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:462955-463044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:464089-464183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:464274-464358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464555-464689:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:466189-466288:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:478912-478988:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:481466-481582:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:481695-481784:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:483290-483455:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:487671-487831:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:488609-488734:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:488823-488889:1:exon

position:488889:1
position: 488889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:491204-491329:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:491959-492056:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:492151-492246:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:492577-492797:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:494118-494323:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:495862-496095:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:498676-498799:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:500664-501133:1:exon

ipo8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: ipo8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: importin-8 isoform X1
translation: MDPNRIIQALKGTIDPNLRIAAEHELNQSYKIINFAPTLLQIIVSEQVEFPVRHAAAIYLKNMVSQYWQDREPSLGEVVFPFNIHENDRQQIRDHLVEGIIRCPESIRSQLTMCLRVVIKHDFPGRWTAIVDKIGKYLQSQSSGSWYGSLLALYQLVKTYEYRKADERQPLLAAMQIFLPRIQQLISQLLADATIFSVLIQKQILKTFHALVQYSLPLQLINNTVMTQWMEILRAIMDRGVPAETLEVDEDDRPELAWWKCKKWALRIITRLFERYGSPGNVTKEYNEFADFFLKTYAMGIQQVLLKVVDQYRQKQYVTPRVLQQCLNYLNLGLSHSLTWKHMKPHMQTICQEVIFPLMCYKDEDEKLWQEDPYEYIRMKFNLYDDHALPATAAQSFLCKAARKRKEVLPQMMEFCHQILRDPSADPRREDGALHCIGALAELLLKKRGYKEQMELMLQNYVFPLLNSPMGYLRARSCWVLHSFSPLRFQDELLLRNAVELVKQDLIEDKEMPVKVEAAIALQTLVSNQEQAKIYIRAHIRPVMQELLHVVKETENDDLTNVIQKMICEYNQEVSAIAVDMTQNLADIFTRVLQSEEYEENEDKTVMALGILSTIDTILTVMEDHKEITQQLEGICLQVIGLVLQKPIIGMAEFYEEILSLAFGLTCQSVSPQMWQLLGVLYEVFQHDCFDYFTDMMPLLHNYVTVDTAMLLSNPKHLEVIYSMCKKVLTIDAGEDAECHAAKLLEVIILQCRGRGIDQCIPLFVEVVLERLMRGVKSSELRTMCLQVAIAALYYNPALLIHTLDNMHFQHNPQPITAHFINQWMSDTEFFLGLHDRKMCIVGLSVLMELPRRPPALEGVSAQILPSVLLLFLGLKHLYASRLVNKPDLLANAGAQDEDQNEEIPSDEDEVSENQSAMQHQSSSQAGEEEEEEEDDDDDDEEDYWDDDGFEGTPLEEYSTPLDYDNGEDEYSFFTSALLRIQNADAAWYQSLTAPLSDDQKKQLQEIYSVSQQRRSSAAK
SIO_010081: ipo8
subclass of: SO_0000673
so part of: ipo8
location: join(440245..440328,459359..459440,459611..459767,460000..460158,461017..461173,462955..463044,464089..464183,464274..464358,464555..464689,466189..466288,478912..478988,481466..481582,481695..481784,483290..483455,487671..487831,488609..488734,488823..488898,491204..491329,491959..492056,492151..492246,492577..492797,494118..494323,495862..496095,498676..498799,500664)
location: region:440245-500664:1
so has part: feature:440245-440328:1:exon
so has part: feature:459359-459440:1:exon
so has part: feature:459611-459767:1:exon
so has part: feature:460000-460158:1:exon
so has part: feature:461017-461173:1:exon
so has part: feature:462955-463044:1:exon
so has part: feature:464089-464183:1:exon
so has part: feature:464274-464358:1:exon
so has part: feature:464555-464689:1:exon
so has part: feature:466189-466288:1:exon
so has part: feature:478912-478988:1:exon
so has part: feature:481466-481582:1:exon
so has part: feature:481695-481784:1:exon
so has part: feature:483290-483455:1:exon
so has part: feature:487671-487831:1:exon
so has part: feature:488609-488734:1:exon
so has part: feature:488823-488898:1:exon
so has part: feature:491204-491329:1:exon
so has part: feature:491959-492056:1:exon
so has part: feature:492151-492246:1:exon
so has part: feature:492577-492797:1:exon
so has part: feature:494118-494323:1:exon
so has part: feature:495862-496095:1:exon
so has part: feature:498676-498799:1:exon
so has part: feature:500664-500664:1:exon

XP_033968421.1
type: Protein
SIO_000068: ncbiprotein

position:440245:1
position: 440245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440245-440328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459359-459440:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459611-459767:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460000-460158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:461017-461173:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:462955-463044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:464089-464183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:464274-464358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464555-464689:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:466189-466288:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:478912-478988:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:481466-481582:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:481695-481784:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:483290-483455:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:487671-487831:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:488609-488734:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:488823-488898:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:491204-491329:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:491959-492056:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:492151-492246:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:492577-492797:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:494118-494323:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:495862-496095:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:498676-498799:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:500664-500664:1:exon

ipo8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: ipo8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: importin-8 isoform X2
translation: MDPNRIIQALKGTIDPNLRIAAEHELNQSYKIINFAPTLLQIIVSEQVEFPVRHAAAIYLKNMVSQYWQDREPSLGEVVFPFNIHENDRQQIRDHLVEGIIRCPESIRSQLTMCLRVVIKHDFPGRWTAIVDKIGKYLQSQSSGSWYGSLLALYQLVKTYEYRKADERQPLLAAMQIFLPRIQQLISQLLADATIFSVLIQKQILKTFHALVQYSLPLQLINNTVMTQWMEILRAIMDRGVPAETLEVDEDDRPELAWWKCKKWALRIITRLFERYGSPGNVTKEYNEFADFFLKTYAMGIQQVLLKVVDQYRQKQYVTPRVLQQCLNYLNLGLSHSLTWKHMKPHMQTICQEVIFPLMCYKDEDEKLWQEDPYEYIRMKFNLYDDHALPATAAQSFLCKAARKRKEVLPQMMEFCHQILRDPSADPRREDGALHCIGALAELLLKKRGYKEQMELMLQNYVFPLLNSPMGYLRARSCWVLHSFSPLRFQDELLLRNAVELVKQDLIEDKEMPVKVEAAIALQTLVSNQEQAKIYIRAHIRPVMQELLHVVKETENDDLTNVIQKMICEYNQEVSAIAVDMTQNLADIFTRVLQSEEYEENEDKTVMALGILSTIDTILTVMEDHKEITQQLEGICLQVIGLVLQKPIIEFYEEILSLAFGLTCQSVSPQMWQLLGVLYEVFQHDCFDYFTDMMPLLHNYVTVDTAMLLSNPKHLEVIYSMCKKVLTIDAGEDAECHAAKLLEVIILQCRGRGIDQCIPLFVEVVLERLMRGVKSSELRTMCLQVAIAALYYNPALLIHTLDNMHFQHNPQPITAHFINQWMSDTEFFLGLHDRKMCIVGLSVLMELPRRPPALEGVSAQILPSVLLLFLGLKHLYASRLVNKPDLLANAGAQDEDQNEEIPSDEDEVSENQSAMQHQSSSQAGEEEEEEEDDDDDDEEDYWDDDGFEGTPLEEYSTPLDYDNGEDEYSFFTSALLRIQNADAAWYQSLTAPLSDDQKKQLQEIYSVSQQRRSSAAK
SIO_010081: ipo8
subclass of: SO_0000673
so part of: ipo8
location: join(440245..440328,459359..459440,459611..459767,460000..460158,461017..461173,462955..463044,464089..464183,464274..464358,464555..464689,466189..466288,478912..478988,481466..481582,481695..481784,483290..483455,487671..487831,488609..488734,488823..488889,491204..491329,491959..492056,492151..492246,492577..492797,494118..494323,495862..496095,498676..498799,500664)
location: region:440245-500664:1
so has part: feature:440245-440328:1:exon
so has part: feature:459359-459440:1:exon
so has part: feature:459611-459767:1:exon
so has part: feature:460000-460158:1:exon
so has part: feature:461017-461173:1:exon
so has part: feature:462955-463044:1:exon
so has part: feature:464089-464183:1:exon
so has part: feature:464274-464358:1:exon
so has part: feature:464555-464689:1:exon
so has part: feature:466189-466288:1:exon
so has part: feature:478912-478988:1:exon
so has part: feature:481466-481582:1:exon
so has part: feature:481695-481784:1:exon
so has part: feature:483290-483455:1:exon
so has part: feature:487671-487831:1:exon
so has part: feature:488609-488734:1:exon
so has part: feature:488823-488889:1:exon
so has part: feature:491204-491329:1:exon
so has part: feature:491959-492056:1:exon
so has part: feature:492151-492246:1:exon
so has part: feature:492577-492797:1:exon
so has part: feature:494118-494323:1:exon
so has part: feature:495862-496095:1:exon
so has part: feature:498676-498799:1:exon
so has part: feature:500664-500664:1:exon

XP_033968422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440245-440328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459359-459440:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459611-459767:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460000-460158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:461017-461173:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:462955-463044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:464089-464183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:464274-464358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464555-464689:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:466189-466288:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:478912-478988:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:481466-481582:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:481695-481784:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:483290-483455:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:487671-487831:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:488609-488734:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:488823-488889:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:491204-491329:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:491959-492056:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:492151-492246:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:492577-492797:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:494118-494323:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:495862-496095:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:498676-498799:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:500664-500664:1:exon

ipo8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: ipo8
product: importin 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034112532.1
SIO_010081: ipo8
subclass of: SO_0000673
so part of: ipo8
location: join(456543..456611,459359..459440,459611..459767,460000..460158,461017..461173,462955..463044,464089..464183,464274..464358,464555..464689,466189..466288,478912..478988,481466..481582,481695..481784,483290..483455,487671..487831,488609..488734,488823..488898,491204..491329,491959..492056,492151..492246,492577..492797,494118..494323,495862..496095,498676..498799,500664..501133)
location: region:456543-501133:1
so has part: feature:456543-456611:1:exon
so has part: feature:459359-459440:1:exon
so has part: feature:459611-459767:1:exon
so has part: feature:460000-460158:1:exon
so has part: feature:461017-461173:1:exon
so has part: feature:462955-463044:1:exon
so has part: feature:464089-464183:1:exon
so has part: feature:464274-464358:1:exon
so has part: feature:464555-464689:1:exon
so has part: feature:466189-466288:1:exon
so has part: feature:478912-478988:1:exon
so has part: feature:481466-481582:1:exon
so has part: feature:481695-481784:1:exon
so has part: feature:483290-483455:1:exon
so has part: feature:487671-487831:1:exon
so has part: feature:488609-488734:1:exon
so has part: feature:488823-488898:1:exon
so has part: feature:491204-491329:1:exon
so has part: feature:491959-492056:1:exon
so has part: feature:492151-492246:1:exon
so has part: feature:492577-492797:1:exon
so has part: feature:494118-494323:1:exon
so has part: feature:495862-496095:1:exon
so has part: feature:498676-498799:1:exon
so has part: feature:500664-501133:1:exon

position:456543:1
position: 456543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456543-456611:1:exon

position:456611:1
position: 456611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:459359-459440:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459611-459767:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460000-460158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:461017-461173:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:462955-463044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:464089-464183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:464274-464358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464555-464689:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:466189-466288:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:478912-478988:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:481466-481582:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:481695-481784:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:483290-483455:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:487671-487831:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:488609-488734:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:488823-488898:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:491204-491329:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:491959-492056:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:492151-492246:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:492577-492797:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:494118-494323:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:495862-496095:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:498676-498799:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:500664-501133:1:exon

ipo8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: ipo8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: importin-8 isoform X3
translation: MVSQYWQDREPSLGEVVFPFNIHENDRQQIRDHLVEGIIRCPESIRSQLTMCLRVVIKHDFPGRWTAIVDKIGKYLQSQSSGSWYGSLLALYQLVKTYEYRKADERQPLLAAMQIFLPRIQQLISQLLADATIFSVLIQKQILKTFHALVQYSLPLQLINNTVMTQWMEILRAIMDRGVPAETLEVDEDDRPELAWWKCKKWALRIITRLFERYGSPGNVTKEYNEFADFFLKTYAMGIQQVLLKVVDQYRQKQYVTPRVLQQCLNYLNLGLSHSLTWKHMKPHMQTICQEVIFPLMCYKDEDEKLWQEDPYEYIRMKFNLYDDHALPATAAQSFLCKAARKRKEVLPQMMEFCHQILRDPSADPRREDGALHCIGALAELLLKKRGYKEQMELMLQNYVFPLLNSPMGYLRARSCWVLHSFSPLRFQDELLLRNAVELVKQDLIEDKEMPVKVEAAIALQTLVSNQEQAKIYIRAHIRPVMQELLHVVKETENDDLTNVIQKMICEYNQEVSAIAVDMTQNLADIFTRVLQSEEYEENEDKTVMALGILSTIDTILTVMEDHKEITQQLEGICLQVIGLVLQKPIIGMAEFYEEILSLAFGLTCQSVSPQMWQLLGVLYEVFQHDCFDYFTDMMPLLHNYVTVDTAMLLSNPKHLEVIYSMCKKVLTIDAGEDAECHAAKLLEVIILQCRGRGIDQCIPLFVEVVLERLMRGVKSSELRTMCLQVAIAALYYNPALLIHTLDNMHFQHNPQPITAHFINQWMSDTEFFLGLHDRKMCIVGLSVLMELPRRPPALEGVSAQILPSVLLLFLGLKHLYASRLVNKPDLLANAGAQDEDQNEEIPSDEDEVSENQSAMQHQSSSQAGEEEEEEEDDDDDDEEDYWDDDGFEGTPLEEYSTPLDYDNGEDEYSFFTSALLRIQNADAAWYQSLTAPLSDDQKKQLQEIYSVSQQRRSSAAK
SIO_010081: ipo8
subclass of: SO_0000673
so part of: ipo8
location: join(459631..459767,460000..460158,461017..461173,462955..463044,464089..464183,464274..464358,464555..464689,466189..466288,478912..478988,481466..481582,481695..481784,483290..483455,487671..487831,488609..488734,488823..488898,491204..491329,491959..492056,492151..492246,492577..492797,494118..494323,495862..496095,498676..498799,500664)
location: region:459631-500664:1
so has part: feature:459631-459767:1:exon
so has part: feature:460000-460158:1:exon
so has part: feature:461017-461173:1:exon
so has part: feature:462955-463044:1:exon
so has part: feature:464089-464183:1:exon
so has part: feature:464274-464358:1:exon
so has part: feature:464555-464689:1:exon
so has part: feature:466189-466288:1:exon
so has part: feature:478912-478988:1:exon
so has part: feature:481466-481582:1:exon
so has part: feature:481695-481784:1:exon
so has part: feature:483290-483455:1:exon
so has part: feature:487671-487831:1:exon
so has part: feature:488609-488734:1:exon
so has part: feature:488823-488898:1:exon
so has part: feature:491204-491329:1:exon
so has part: feature:491959-492056:1:exon
so has part: feature:492151-492246:1:exon
so has part: feature:492577-492797:1:exon
so has part: feature:494118-494323:1:exon
so has part: feature:495862-496095:1:exon
so has part: feature:498676-498799:1:exon
so has part: feature:500664-500664:1:exon

XP_033968423.1
type: Protein
SIO_000068: ncbiprotein

position:459631:1
position: 459631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459631-459767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460000-460158:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:461017-461173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:462955-463044:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464089-464183:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:464274-464358:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:464555-464689:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466189-466288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478912-478988:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:481466-481582:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:481695-481784:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:483290-483455:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:487671-487831:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:488609-488734:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:488823-488898:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:491204-491329:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:491959-492056:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:492151-492246:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:492577-492797:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:494118-494323:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:495862-496095:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:498676-498799:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:500664-500664:1:exon

tmtc1
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: tmtc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 511977..615541
location: region:511977-615541:1
so has part: feature:511977-615541:1:exon
subclass of: SO_0000010

117439062
type: Gene
SIO_000068: ncbigene

position:511977:1
position: 511977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615541:1
position: 615541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511977-615541:1:exon

tmtc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: tmtc1
product: transmembrane O-mannosyltransferase targeting cadherins 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034074777.1
SIO_010081: tmtc1
subclass of: SO_0000673
so part of: tmtc1
location: join(511977..512396,527084..527261,533941..534014,543316..543492,546528..546609,556481..556584,561958..562147,564076..564197,565931..566098,571848..571961,582621..582764,584852..584960,586454..586556,591217..591352,591911..592055,592163..592300,598986..599108,607282..607359,614373..615541)
location: region:511977-615541:1
so has part: feature:511977-512396:1:exon
so has part: feature:527084-527261:1:exon
so has part: feature:533941-534014:1:exon
so has part: feature:543316-543492:1:exon
so has part: feature:546528-546609:1:exon
so has part: feature:556481-556584:1:exon
so has part: feature:561958-562147:1:exon
so has part: feature:564076-564197:1:exon
so has part: feature:565931-566098:1:exon
so has part: feature:571848-571961:1:exon
so has part: feature:582621-582764:1:exon
so has part: feature:584852-584960:1:exon
so has part: feature:586454-586556:1:exon
so has part: feature:591217-591352:1:exon
so has part: feature:591911-592055:1:exon
so has part: feature:592163-592300:1:exon
so has part: feature:598986-599108:1:exon
so has part: feature:607282-607359:1:exon
so has part: feature:614373-615541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:511977-512396:1:exon

position:512396:1
position: 512396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:527084-527261:1:exon

position:527084:1
position: 527084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527261:1
position: 527261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:533941-534014:1:exon

position:533941:1
position: 533941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534014:1
position: 534014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:543316-543492:1:exon

position:543316:1
position: 543316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543492:1
position: 543492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:546528-546609:1:exon

position:546528:1
position: 546528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546609:1
position: 546609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:556481-556584:1:exon

position:556481:1
position: 556481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556584:1
position: 556584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:561958-562147:1:exon

position:561958:1
position: 561958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562147:1
position: 562147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:564076-564197:1:exon

position:564076:1
position: 564076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564197:1
position: 564197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:565931-566098:1:exon

position:565931:1
position: 565931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566098:1
position: 566098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:571848-571961:1:exon

position:571848:1
position: 571848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571961:1
position: 571961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:582621-582764:1:exon

position:582621:1
position: 582621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582764:1
position: 582764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:584852-584960:1:exon

position:584852:1
position: 584852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584960:1
position: 584960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:586454-586556:1:exon

position:586454:1
position: 586454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586556:1
position: 586556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:591217-591352:1:exon

position:591217:1
position: 591217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591352:1
position: 591352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:591911-592055:1:exon

position:591911:1
position: 591911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592055:1
position: 592055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:592163-592300:1:exon

position:592163:1
position: 592163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592300:1
position: 592300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:598986-599108:1:exon

position:598986:1
position: 598986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599108:1
position: 599108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:607282-607359:1:exon

position:607282:1
position: 607282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607359:1
position: 607359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:614373-615541:1:exon

position:614373:1
position: 614373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmtc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: tmtc1
product: transmembrane O-mannosyltransferase targeting cadherins 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034074778.1
SIO_010081: tmtc1
subclass of: SO_0000673
so part of: tmtc1
location: join(511977..512396,527084..527261,533941..534014,546528..546609,556481..556584,561958..562147,564076..564197,565931..566098,571848..571961,582621..582764,584852..584960,586454..586556,591217..591352,591911..592055,592163..592300,598986..599108,607282..607359,614373..615541)
location: region:511977-615541:1
so has part: feature:511977-512396:1:exon
so has part: feature:527084-527261:1:exon
so has part: feature:533941-534014:1:exon
so has part: feature:546528-546609:1:exon
so has part: feature:556481-556584:1:exon
so has part: feature:561958-562147:1:exon
so has part: feature:564076-564197:1:exon
so has part: feature:565931-566098:1:exon
so has part: feature:571848-571961:1:exon
so has part: feature:582621-582764:1:exon
so has part: feature:584852-584960:1:exon
so has part: feature:586454-586556:1:exon
so has part: feature:591217-591352:1:exon
so has part: feature:591911-592055:1:exon
so has part: feature:592163-592300:1:exon
so has part: feature:598986-599108:1:exon
so has part: feature:607282-607359:1:exon
so has part: feature:614373-615541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:511977-512396:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527084-527261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:533941-534014:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:546528-546609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:556481-556584:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:561958-562147:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:564076-564197:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:565931-566098:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:571848-571961:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:582621-582764:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:584852-584960:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:586454-586556:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:591217-591352:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:591911-592055:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:592163-592300:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:598986-599108:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:607282-607359:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:614373-615541:1:exon

tmtc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: tmtc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-mannosyl-transferase TMTC1 isoform X1
translation: MTAPRREKKSPPPPRLTVRPEVVLAVGRYALLAAVCAACYSSSLHGELVHDDVWAIINNPDVRPGSSLKNVFSNDFWGKRMADNTSHKSYRPLCILTFRLNILLGGMTPLYFHIINVCLHCAVTCLLMHTCERCVFEDSRLAFVTALLFAVHPIHTEAVSGIVGRADVLACLLFLLTFLSYIRSVGVCVCEGSLPPTVSAWFLLASLFLGTGAMLVKETGITVFAVCVLYDALVLCRRPFLHQLSGSRIRDLRYVCSPFIKRACLISGFVLIIMSVRLWLMGGSMPLFSEQDNPASFSPHLLTRMLTYSYLLSFNAWLLLAPVVLCYDWQVGSIPLVESLVDIRNVSTVLLAVVMVALCLSCLFSLQGQGSREMLVGMLFLMFPFIPASNLFFRVGFVVAERVLYMPSMGYCILVAHGLGRLCSLVGRLGTTVLSVSLLLLLLLFSWKTVQQNNVWRSREALFRSGIQTLPHNAKVHYNYANFLKDNIRHQEAIHHYTTALRLYPRHASAMNNLGTLTRDPEEAERYYRKALATNPQHNRALFNLGNLLKSLGKEEEAEALLKDSIHFGPHFADAYSSLASLYAEQKRFAEGKEVYLEGIEKCPDSSDLHNNYGVFLVDTGEGELAAAHYQQAVSLKPAHYVAMVNLGRLLRSSNENTEAESWYKRALQVTRKVDILTPLGALYYNTGRYNEALQVYSEAAALQPHSTDIWLALAQVLAMAGRSKEAEKMTLDIISRDSGCIECYRLLSAIYSKRGNYTQALAALDRALQQSPSDVTVRAELYFSKGNQFREMNQLDRAFQSYKLAVELKPDQSQAWMNMGGIQHIKGDYAAARMYYQRALLLSPGSKLLKENLAKLDRLERKVTGGS
SIO_010081: tmtc1
subclass of: SO_0000673
so part of: tmtc1
location: join(512101..512396,527084..527261,533941..534014,543316..543492,546528..546609,556481..556584,561958..562147,564076..564197,565931..566098,571848..571961,582621..582764,584852..584960,586454..586556,591217..591352,591911..592055,592163..592300,598986..599108,607282..607359,614373..614498)
location: region:512101-614498:1
so has part: feature:512101-512396:1:exon
so has part: feature:527084-527261:1:exon
so has part: feature:533941-534014:1:exon
so has part: feature:543316-543492:1:exon
so has part: feature:546528-546609:1:exon
so has part: feature:556481-556584:1:exon
so has part: feature:561958-562147:1:exon
so has part: feature:564076-564197:1:exon
so has part: feature:565931-566098:1:exon
so has part: feature:571848-571961:1:exon
so has part: feature:582621-582764:1:exon
so has part: feature:584852-584960:1:exon
so has part: feature:586454-586556:1:exon
so has part: feature:591217-591352:1:exon
so has part: feature:591911-592055:1:exon
so has part: feature:592163-592300:1:exon
so has part: feature:598986-599108:1:exon
so has part: feature:607282-607359:1:exon
so has part: feature:614373-614498:1:exon

XP_033930668.1
type: Protein
SIO_000068: ncbiprotein

position:512101:1
position: 512101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614498:1
position: 614498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512101-512396:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527084-527261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:533941-534014:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:543316-543492:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:546528-546609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556481-556584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:561958-562147:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:564076-564197:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:565931-566098:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:571848-571961:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:582621-582764:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:584852-584960:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:586454-586556:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:591217-591352:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:591911-592055:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:592163-592300:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:598986-599108:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:607282-607359:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:614373-614498:1:exon

tmtc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: tmtc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-mannosyl-transferase TMTC1 isoform X2
translation: MTAPRREKKSPPPPRLTVRPEVVLAVGRYALLAAVCAACYSSSLHGELVHDDVWAIINNPDVRPGSSLKNVFSNDFWGKRMADNTSHKSYRPLCILTFRLNILLGGMTPLYFHIINVCLHCAVTCLLMHTCERCVFEDSRLAFVTALLFAVHPIHTEAVSGIVGRADVLACLLFLLTFLSYISQLSGSRIRDLRYVCSPFIKRACLISGFVLIIMSVRLWLMGGSMPLFSEQDNPASFSPHLLTRMLTYSYLLSFNAWLLLAPVVLCYDWQVGSIPLVESLVDIRNVSTVLLAVVMVALCLSCLFSLQGQGSREMLVGMLFLMFPFIPASNLFFRVGFVVAERVLYMPSMGYCILVAHGLGRLCSLVGRLGTTVLSVSLLLLLLLFSWKTVQQNNVWRSREALFRSGIQTLPHNAKVHYNYANFLKDNIRHQEAIHHYTTALRLYPRHASAMNNLGTLTRDPEEAERYYRKALATNPQHNRALFNLGNLLKSLGKEEEAEALLKDSIHFGPHFADAYSSLASLYAEQKRFAEGKEVYLEGIEKCPDSSDLHNNYGVFLVDTGEGELAAAHYQQAVSLKPAHYVAMVNLGRLLRSSNENTEAESWYKRALQVTRKVDILTPLGALYYNTGRYNEALQVYSEAAALQPHSTDIWLALAQVLAMAGRSKEAEKMTLDIISRDSGCIECYRLLSAIYSKRGNYTQALAALDRALQQSPSDVTVRAELYFSKGNQFREMNQLDRAFQSYKLAVELKPDQSQAWMNMGGIQHIKGDYAAARMYYQRALLLSPGSKLLKENLAKLDRLERKVTGGS
SIO_010081: tmtc1
subclass of: SO_0000673
so part of: tmtc1
location: join(512101..512396,527084..527261,533941..534014,546528..546609,556481..556584,561958..562147,564076..564197,565931..566098,571848..571961,582621..582764,584852..584960,586454..586556,591217..591352,591911..592055,592163..592300,598986..599108,607282..607359,614373..614498)
location: region:512101-614498:1
so has part: feature:512101-512396:1:exon
so has part: feature:527084-527261:1:exon
so has part: feature:533941-534014:1:exon
so has part: feature:546528-546609:1:exon
so has part: feature:556481-556584:1:exon
so has part: feature:561958-562147:1:exon
so has part: feature:564076-564197:1:exon
so has part: feature:565931-566098:1:exon
so has part: feature:571848-571961:1:exon
so has part: feature:582621-582764:1:exon
so has part: feature:584852-584960:1:exon
so has part: feature:586454-586556:1:exon
so has part: feature:591217-591352:1:exon
so has part: feature:591911-592055:1:exon
so has part: feature:592163-592300:1:exon
so has part: feature:598986-599108:1:exon
so has part: feature:607282-607359:1:exon
so has part: feature:614373-614498:1:exon

XP_033930669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512101-512396:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527084-527261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:533941-534014:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:546528-546609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:556481-556584:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:561958-562147:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:564076-564197:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:565931-566098:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:571848-571961:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:582621-582764:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:584852-584960:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:586454-586556:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:591217-591352:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:591911-592055:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:592163-592300:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:598986-599108:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:607282-607359:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:614373-614498:1:exon

galk1
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: galk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 644573..661972
location: region:644573-661972:1
so has part: feature:644573-661972:1:exon
subclass of: SO_0000010

117439138
type: Gene
SIO_000068: ncbigene

position:644573:1
position: 644573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661972:1
position: 661972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644573-661972:1:exon

galk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: galk1
product: galactokinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_034074897.1
SIO_010081: galk1
subclass of: SO_0000673
so part of: galk1
location: join(644573..644901,645474..645663,645838..645957,646684..646819,648246..648427,651128..651278,651359..651521,661221..661972)
location: region:644573-661972:1
so has part: feature:644573-644901:1:exon
so has part: feature:645474-645663:1:exon
so has part: feature:645838-645957:1:exon
so has part: feature:646684-646819:1:exon
so has part: feature:648246-648427:1:exon
so has part: feature:651128-651278:1:exon
so has part: feature:651359-651521:1:exon
so has part: feature:661221-661972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:644573-644901:1:exon

position:644901:1
position: 644901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:645474-645663:1:exon

position:645474:1
position: 645474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645663:1
position: 645663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:645838-645957:1:exon

position:645838:1
position: 645838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645957:1
position: 645957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:646684-646819:1:exon

position:646684:1
position: 646684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646819:1
position: 646819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:648246-648427:1:exon

position:648246:1
position: 648246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648427:1
position: 648427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:651128-651278:1:exon

position:651128:1
position: 651128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651278:1
position: 651278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:651359-651521:1:exon

position:651359:1
position: 651359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651521:1
position: 651521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:661221-661972:1:exon

position:661221:1
position: 661221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

galk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: galk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactokinase
translation: MADSVPTVSELFAAARRRYEQLFGGDAPLIAVCAPGRVNLIGEHTDYNQGFVLPMALPLVTVVVGSQTCGRDVTVVTATEDADEPHRVDFSLPADGAPLAPGLPRWANYVKGVIEHYRAPPVTGFRAVIASSVPLGGGLSSSASLEVAFYTFLQQLQPDDGDKVSKAVACQQAEHSHAGVPCGIMDQFVSVLGREGHALLIDCRSLEATPVPLADPGLIILITNSNVKHSLSGSEYPLRRRRCEEAASAMGKSSLRDATMKDLEEASDRMDEVTVRRARHVINEIERTVQAAEALRRGEYKEFGRLMVESHNSLRDLYEVSCRELDELVAAALEVEGVYGSRMTGGGFGGCTVTLLQAGAIDRTILHIQERYSGTPTFYVTTPSEGARVLSLP
SIO_010081: galk1
subclass of: SO_0000673
so part of: galk1
location: join(644737..644901,645474..645663,645838..645957,646684..646819,648246..648427,651128..651278,651359..651521,661221..661295)
location: region:644737-661295:1
so has part: feature:644737-644901:1:exon
so has part: feature:645474-645663:1:exon
so has part: feature:645838-645957:1:exon
so has part: feature:646684-646819:1:exon
so has part: feature:648246-648427:1:exon
so has part: feature:651128-651278:1:exon
so has part: feature:651359-651521:1:exon
so has part: feature:661221-661295:1:exon

XP_033930788.1
type: Protein
SIO_000068: ncbiprotein

position:644737:1
position: 644737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661295:1
position: 661295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644737-644901:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645474-645663:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645838-645957:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:646684-646819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:648246-648427:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651128-651278:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651359-651521:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:661221-661295:1:exon

llgl2
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: llgl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 662335..696372
location: region:662335-696372:1
so has part: feature:662335-696372:1:exon
subclass of: SO_0000010

117439020
type: Gene
SIO_000068: ncbigene

position:662335:1
position: 662335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696372:1
position: 696372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662335-696372:1:exon

llgl2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: llgl2
product: LLGL scribble cell polarity complex component 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_034074701.1
SIO_010081: llgl2
subclass of: SO_0000673
so part of: llgl2
location: join(662335..662634,678540..678643,681132..681229,682253..682334,682575..682690,683254..683412,685327..685489,685579..685711,685789..685843,686283..686437,687496..687707,687975..688042,688124..688277,689034..689138,689681..689776,689942..690138,691170..691317,691413..691560,691643..691759,691837..692003,692225..692489,693190..693334,693420..693448,693638..693685,693977..694019,694801..694860,694948..696372)
location: region:662335-696372:1
so has part: feature:662335-662634:1:exon
so has part: feature:678540-678643:1:exon
so has part: feature:681132-681229:1:exon
so has part: feature:682253-682334:1:exon
so has part: feature:682575-682690:1:exon
so has part: feature:683254-683412:1:exon
so has part: feature:685327-685489:1:exon
so has part: feature:685579-685711:1:exon
so has part: feature:685789-685843:1:exon
so has part: feature:686283-686437:1:exon
so has part: feature:687496-687707:1:exon
so has part: feature:687975-688042:1:exon
so has part: feature:688124-688277:1:exon
so has part: feature:689034-689138:1:exon
so has part: feature:689681-689776:1:exon
so has part: feature:689942-690138:1:exon
so has part: feature:691170-691317:1:exon
so has part: feature:691413-691560:1:exon
so has part: feature:691643-691759:1:exon
so has part: feature:691837-692003:1:exon
so has part: feature:692225-692489:1:exon
so has part: feature:693190-693334:1:exon
so has part: feature:693420-693448:1:exon
so has part: feature:693638-693685:1:exon
so has part: feature:693977-694019:1:exon
so has part: feature:694801-694860:1:exon
so has part: feature:694948-696372:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662335-662634:1:exon

position:662634:1
position: 662634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:678540-678643:1:exon

position:678540:1
position: 678540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678643:1
position: 678643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:681132-681229:1:exon

position:681132:1
position: 681132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681229:1
position: 681229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:682253-682334:1:exon

position:682253:1
position: 682253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682334:1
position: 682334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:682575-682690:1:exon

position:682575:1
position: 682575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682690:1
position: 682690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:683254-683412:1:exon

position:683254:1
position: 683254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683412:1
position: 683412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:685327-685489:1:exon

position:685327:1
position: 685327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685489:1
position: 685489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:685579-685711:1:exon

position:685579:1
position: 685579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685711:1
position: 685711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:685789-685843:1:exon

position:685789:1
position: 685789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685843:1
position: 685843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:686283-686437:1:exon

position:686283:1
position: 686283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686437:1
position: 686437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:687496-687707:1:exon

position:687496:1
position: 687496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687707:1
position: 687707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:687975-688042:1:exon

position:687975:1
position: 687975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688042:1
position: 688042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:688124-688277:1:exon

position:688124:1
position: 688124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688277:1
position: 688277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:689034-689138:1:exon

position:689034:1
position: 689034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689138:1
position: 689138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:689681-689776:1:exon

position:689681:1
position: 689681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689776:1
position: 689776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:689942-690138:1:exon

position:689942:1
position: 689942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690138:1
position: 690138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:691170-691317:1:exon

position:691170:1
position: 691170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691317:1
position: 691317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:691413-691560:1:exon

position:691413:1
position: 691413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691560:1
position: 691560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:691643-691759:1:exon

position:691643:1
position: 691643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691759:1
position: 691759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:691837-692003:1:exon

position:691837:1
position: 691837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692003:1
position: 692003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:692225-692489:1:exon

position:692225:1
position: 692225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692489:1
position: 692489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:693190-693334:1:exon

position:693190:1
position: 693190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693334:1
position: 693334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:693420-693448:1:exon

position:693420:1
position: 693420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693448:1
position: 693448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:693638-693685:1:exon

position:693638:1
position: 693638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693685:1
position: 693685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:693977-694019:1:exon

position:693977:1
position: 693977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694019:1
position: 694019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:694801-694860:1:exon

position:694801:1
position: 694801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694860:1
position: 694860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:694948-696372:1:exon

position:694948:1
position: 694948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

llgl2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: llgl2
product: LLGL scribble cell polarity complex component 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_034074702.1
SIO_010081: llgl2
subclass of: SO_0000673
so part of: llgl2
location: join(662335..662634,678540..678643,681132..681229,682253..682334,682575..682690,683254..683412,685327..685489,685579..685711,685789..685843,686283..686437,687496..687707,687975..688042,688124..688277,689034..689138,689681..689776,689942..690138,691170..691317,691413..691560,691643..691759,691837..692003,692225..692489,693190..693334,693420..693448,693977..694019,694801..694860,694948..696372)
location: region:662335-696372:1
so has part: feature:662335-662634:1:exon
so has part: feature:678540-678643:1:exon
so has part: feature:681132-681229:1:exon
so has part: feature:682253-682334:1:exon
so has part: feature:682575-682690:1:exon
so has part: feature:683254-683412:1:exon
so has part: feature:685327-685489:1:exon
so has part: feature:685579-685711:1:exon
so has part: feature:685789-685843:1:exon
so has part: feature:686283-686437:1:exon
so has part: feature:687496-687707:1:exon
so has part: feature:687975-688042:1:exon
so has part: feature:688124-688277:1:exon
so has part: feature:689034-689138:1:exon
so has part: feature:689681-689776:1:exon
so has part: feature:689942-690138:1:exon
so has part: feature:691170-691317:1:exon
so has part: feature:691413-691560:1:exon
so has part: feature:691643-691759:1:exon
so has part: feature:691837-692003:1:exon
so has part: feature:692225-692489:1:exon
so has part: feature:693190-693334:1:exon
so has part: feature:693420-693448:1:exon
so has part: feature:693977-694019:1:exon
so has part: feature:694801-694860:1:exon
so has part: feature:694948-696372:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662335-662634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678540-678643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:681132-681229:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682253-682334:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682575-682690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:683254-683412:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:685327-685489:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:685579-685711:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:685789-685843:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:686283-686437:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:687496-687707:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:687975-688042:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:688124-688277:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:689034-689138:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:689681-689776:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:689942-690138:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:691170-691317:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:691413-691560:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:691643-691759:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:691837-692003:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:692225-692489:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:693190-693334:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:693420-693448:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:693977-694019:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:694801-694860:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:694948-696372:1:exon

llgl2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: llgl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LLGL scribble cell polarity complex component 2 isoform X1
translation: MKRFRRHGQESQRDRLKQELFQFNKTVEHGFPHQPSALGYSPSLQLLAIGTRSGAIKLYGAPGVEFMGLHDENAAVTQVHFLPHQVELVTLLDDNSLHMWTLKAHTGLSELLEIGRFTLTGPPGAPPSVTRVTAVLAHSSGELLLLGTEGGHVFIVEVPGFRELEERNISLDQVASSVPDDYIGRRNLEHVEALQENPVNPNQVVIGYGRGLMVIWDLEKQSAVQHIPATQQLESVWWTEDGDYLLSSHSDGSYCRWMVSGVDVNEEEEKSDIPYGHFPCKAISKIIQLPTEEGPPFLLFSGGMPRASYGDRHCITVIHGKTHVALDFTSRIIDFFAIRDGRQHTGEPSALVVLVEEELVVIDLLTEGWPVIQTPYLVPLHSSAITCSHHVSAIPLKLWERVLAAGDLQSTHYSKKPWPITGGQNLAPDPPQRDLLLTGHEDGTVRFWDASGVCLCPMYKLSTAGVFHTDADPNDNMNQGSEGEWPPFRKVGCFDPYSDDPRLGVQKIHLCKYSGYLTVAGTAGQILMLELNDEAAEQTVEAKVVDLLQGQEGFRWKGHTQLDVREEPVLFPPGFQPFALVQCQPPAVVTALTLHSEWKLVAFGTSHGFGLYDYQQKNNVLIKCTLNPSDQLAMEGPLSRVKSIKKSLRQSFRRIRRSRVSLRKHHVTHSNKLQDANARLEAELAEMELAPVQRKIEARSSDDSFTGLVRTIYFADTFLSDSSHNTPSLWAGTNGGCVFAYMLRLPPVEHRAEEPVTAQPAKEIQLMHRAPVVGIVVLDGHGAPLPEPLEVAHDLARSPDMQGSHHLLVISEEQFKMFTLPKVSAKMKLKLTAVDGSRVRRVGVSWFGSSRSEDYGESGLVVLTNQGDVHVVSLPNVKMQVHYPCVRREDVSGIASCVFTKHGQGFYLISPSEFERFSVSTRCVVEPRCLVEVPLHSSTQRRPQPDGASSAHRNARQDSEDAESAAKRVMEHALLNDEKVLEEIQKSLEGDQTSILDNNVKSAVA
SIO_010081: llgl2
subclass of: SO_0000673
so part of: llgl2
location: join(678569..678643,681132..681229,682253..682334,682575..682690,683254..683412,685327..685489,685579..685711,685789..685843,686283..686437,687496..687707,687975..688042,688124..688277,689034..689138,689681..689776,689942..690138,691170..691317,691413..691560,691643..691759,691837..692003,692225..692489,693190..693334,693420..693448,693638..693685,693977..694019,694801..694840)
location: region:678569-694840:1
so has part: feature:678569-678643:1:exon
so has part: feature:681132-681229:1:exon
so has part: feature:682253-682334:1:exon
so has part: feature:682575-682690:1:exon
so has part: feature:683254-683412:1:exon
so has part: feature:685327-685489:1:exon
so has part: feature:685579-685711:1:exon
so has part: feature:685789-685843:1:exon
so has part: feature:686283-686437:1:exon
so has part: feature:687496-687707:1:exon
so has part: feature:687975-688042:1:exon
so has part: feature:688124-688277:1:exon
so has part: feature:689034-689138:1:exon
so has part: feature:689681-689776:1:exon
so has part: feature:689942-690138:1:exon
so has part: feature:691170-691317:1:exon
so has part: feature:691413-691560:1:exon
so has part: feature:691643-691759:1:exon
so has part: feature:691837-692003:1:exon
so has part: feature:692225-692489:1:exon
so has part: feature:693190-693334:1:exon
so has part: feature:693420-693448:1:exon
so has part: feature:693638-693685:1:exon
so has part: feature:693977-694019:1:exon
so has part: feature:694801-694840:1:exon

XP_033930592.1
type: Protein
SIO_000068: ncbiprotein

position:678569:1
position: 678569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694840:1
position: 694840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678569-678643:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:681132-681229:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:682253-682334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682575-682690:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:683254-683412:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685327-685489:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:685579-685711:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:685789-685843:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:686283-686437:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687496-687707:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:687975-688042:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:688124-688277:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:689034-689138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:689681-689776:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:689942-690138:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:691170-691317:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:691413-691560:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:691643-691759:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:691837-692003:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:692225-692489:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:693190-693334:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:693420-693448:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:693638-693685:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:693977-694019:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:694801-694840:1:exon

llgl2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: llgl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LLGL scribble cell polarity complex component 2 isoform X2
translation: MKRFRRHGQESQRDRLKQELFQFNKTVEHGFPHQPSALGYSPSLQLLAIGTRSGAIKLYGAPGVEFMGLHDENAAVTQVHFLPHQVELVTLLDDNSLHMWTLKAHTGLSELLEIGRFTLTGPPGAPPSVTRVTAVLAHSSGELLLLGTEGGHVFIVEVPGFRELEERNISLDQVASSVPDDYIGRRNLEHVEALQENPVNPNQVVIGYGRGLMVIWDLEKQSAVQHIPATQQLESVWWTEDGDYLLSSHSDGSYCRWMVSGVDVNEEEEKSDIPYGHFPCKAISKIIQLPTEEGPPFLLFSGGMPRASYGDRHCITVIHGKTHVALDFTSRIIDFFAIRDGRQHTGEPSALVVLVEEELVVIDLLTEGWPVIQTPYLVPLHSSAITCSHHVSAIPLKLWERVLAAGDLQSTHYSKKPWPITGGQNLAPDPPQRDLLLTGHEDGTVRFWDASGVCLCPMYKLSTAGVFHTDADPNDNMNQGSEGEWPPFRKVGCFDPYSDDPRLGVQKIHLCKYSGYLTVAGTAGQILMLELNDEAAEQTVEAKVVDLLQGQEGFRWKGHTQLDVREEPVLFPPGFQPFALVQCQPPAVVTALTLHSEWKLVAFGTSHGFGLYDYQQKNNVLIKCTLNPSDQLAMEGPLSRVKSIKKSLRQSFRRIRRSRVSLRKHHVTHSNKLQDANARLEAELAEMELAPVQRKIEARSSDDSFTGLVRTIYFADTFLSDSSHNTPSLWAGTNGGCVFAYMLRLPPVEHRAEEPVTAQPAKEIQLMHRAPVVGIVVLDGHGAPLPEPLEVAHDLARSPDMQGSHHLLVISEEQFKMFTLPKVSAKMKLKLTAVDGSRVRRVGVSWFGSSRSEDYGESGLVVLTNQGDVHVVSLPNVKMQVHYPCVRREDVSGIASCVFTKHGQGFYLISPSEFERFSVSTRCVVEPRCLVEVPLHSSTQRRPQPDGASSAHRNARQDSEDAEVLEEIQKSLEGDQTSILDNNVKSAVA
SIO_010081: llgl2
subclass of: SO_0000673
so part of: llgl2
location: join(678569..678643,681132..681229,682253..682334,682575..682690,683254..683412,685327..685489,685579..685711,685789..685843,686283..686437,687496..687707,687975..688042,688124..688277,689034..689138,689681..689776,689942..690138,691170..691317,691413..691560,691643..691759,691837..692003,692225..692489,693190..693334,693420..693448,693977..694019,694801..694840)
location: region:678569-694840:1
so has part: feature:678569-678643:1:exon
so has part: feature:681132-681229:1:exon
so has part: feature:682253-682334:1:exon
so has part: feature:682575-682690:1:exon
so has part: feature:683254-683412:1:exon
so has part: feature:685327-685489:1:exon
so has part: feature:685579-685711:1:exon
so has part: feature:685789-685843:1:exon
so has part: feature:686283-686437:1:exon
so has part: feature:687496-687707:1:exon
so has part: feature:687975-688042:1:exon
so has part: feature:688124-688277:1:exon
so has part: feature:689034-689138:1:exon
so has part: feature:689681-689776:1:exon
so has part: feature:689942-690138:1:exon
so has part: feature:691170-691317:1:exon
so has part: feature:691413-691560:1:exon
so has part: feature:691643-691759:1:exon
so has part: feature:691837-692003:1:exon
so has part: feature:692225-692489:1:exon
so has part: feature:693190-693334:1:exon
so has part: feature:693420-693448:1:exon
so has part: feature:693977-694019:1:exon
so has part: feature:694801-694840:1:exon

XP_033930593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:678569-678643:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:681132-681229:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:682253-682334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682575-682690:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:683254-683412:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685327-685489:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:685579-685711:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:685789-685843:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:686283-686437:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687496-687707:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:687975-688042:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:688124-688277:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:689034-689138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:689681-689776:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:689942-690138:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:691170-691317:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:691413-691560:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:691643-691759:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:691837-692003:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:692225-692489:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:693190-693334:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:693420-693448:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:693977-694019:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:694801-694840:1:exon

LOC117439355
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439355
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 771772..778492
location: region:771772-778492:1
so has part: feature:771772-778492:1:exon
subclass of: SO_0000010

117439355
type: Gene
SIO_000068: ncbigene

position:771772:1
position: 771772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778492:1
position: 778492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771772-778492:1:exon

LOC117439355
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439355
product: uncharacterized LOC117439355
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034075267.1
SIO_010081: LOC117439355
subclass of: SO_0000673
so part of: LOC117439355
location: join(771772..772333,775635..775727,775820..775995,777099..777192,778475..778492)
location: region:771772-778492:1
so has part: feature:771772-772333:1:exon
so has part: feature:775635-775727:1:exon
so has part: feature:775820-775995:1:exon
so has part: feature:777099-777192:1:exon
so has part: feature:778475-778492:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:771772-772333:1:exon

position:772333:1
position: 772333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:775635-775727:1:exon

position:775635:1
position: 775635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775727:1
position: 775727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:775820-775995:1:exon

position:775820:1
position: 775820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775995:1
position: 775995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:777099-777192:1:exon

position:777099:1
position: 777099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777192:1
position: 777192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:778475-778492:1:exon

position:778475:1
position: 778475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117439355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439355
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117439355
translation: MRDRLEKMSQLAQSHMAVAQQQQKSWYDRSARQRSFNPGQKVLVLLPSDNSKLLAKWQGPFEIKKQLGPTTYEVSTPGKPRSSRVLHINLLKEWVPRPEQEARVMLIRDVQEEEEVEEQYLSPGGATVSHDLSHLSEDKQLQVRSSAESASGRGVGQGAAAGPAGAGGGRGGALFLKELLYQQLEEKWSSTQTWAAITIQRNIRGFICRRNFRFFRQKAIVIQSHIRGHQARKHYKRLRQCFTQFWAVMMITRDTIKRRHWRKFSPDR
SIO_010081: LOC117439355
subclass of: SO_0000673
so part of: LOC117439355
location: join(771908..772333,775635..775727,775820..775995,777099..777192,778475..778492)
location: region:771908-778492:1
so has part: feature:771908-772333:1:exon
so has part: feature:775635-775727:1:exon
so has part: feature:775820-775995:1:exon
so has part: feature:777099-777192:1:exon
so has part: feature:778475-778492:1:exon

XP_033931158.1
type: Protein
SIO_000068: ncbiprotein

position:771908:1
position: 771908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771908-772333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775635-775727:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:775820-775995:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777099-777192:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778475-778492:1:exon

LOC117439356
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 778404..794742
location: region:778404-794742:1
so has part: feature:778404-794742:1:exon
subclass of: SO_0000010

117439356
type: Gene
SIO_000068: ncbigene

position:778404:1
position: 778404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794742:1
position: 794742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778404-794742:1:exon

LOC117439356
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439356
product: unconventional myosin-XVB-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034075269.1
SIO_010081: LOC117439356
subclass of: SO_0000673
so part of: LOC117439356
location: join(778404..778488,783245..783307,783428..783485,783574..783698,784183..784278,784357..784592,786604..786773,786860..786932,787280..787462,787555..787664,788209..788276,788993..789065,790504..790536,790668..790724,794732..794742)
location: region:778404-794742:1
so has part: feature:778404-778488:1:exon
so has part: feature:783245-783307:1:exon
so has part: feature:783428-783485:1:exon
so has part: feature:783574-783698:1:exon
so has part: feature:784183-784278:1:exon
so has part: feature:784357-784592:1:exon
so has part: feature:786604-786773:1:exon
so has part: feature:786860-786932:1:exon
so has part: feature:787280-787462:1:exon
so has part: feature:787555-787664:1:exon
so has part: feature:788209-788276:1:exon
so has part: feature:788993-789065:1:exon
so has part: feature:790504-790536:1:exon
so has part: feature:790668-790724:1:exon
so has part: feature:794732-794742:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:778404-778488:1:exon

position:778488:1
position: 778488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:783245-783307:1:exon

position:783245:1
position: 783245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783307:1
position: 783307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:783428-783485:1:exon

position:783428:1
position: 783428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783485:1
position: 783485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:783574-783698:1:exon

position:783574:1
position: 783574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783698:1
position: 783698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:784183-784278:1:exon

position:784183:1
position: 784183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784278:1
position: 784278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:784357-784592:1:exon

position:784357:1
position: 784357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784592:1
position: 784592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:786604-786773:1:exon

position:786604:1
position: 786604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786773:1
position: 786773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:786860-786932:1:exon

position:786860:1
position: 786860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786932:1
position: 786932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:787280-787462:1:exon

position:787280:1
position: 787280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787462:1
position: 787462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:787555-787664:1:exon

position:787555:1
position: 787555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787664:1
position: 787664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:788209-788276:1:exon

position:788209:1
position: 788209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788276:1
position: 788276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:788993-789065:1:exon

position:788993:1
position: 788993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789065:1
position: 789065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:790504-790536:1:exon

position:790504:1
position: 790504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790536:1
position: 790536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:790668-790724:1:exon

position:790668:1
position: 790668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790724:1
position: 790724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:794732-794742:1:exon

position:794732:1
position: 794732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117439356
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-XVB-like
translation: MDVGMLEIPAELSARLCSAAGQQHGSGVTEVAPPQVKAQHKLSLPLDVDRYPFSRYAKSTLKDTWCQPQGRPLQRSLTPLEPEDNRTALDIYKLILRFTGESELSGWQEQLLGNYIVERGQSRPPLRDEILAQLAYHTWGLQEDLSSLRGWLLLTCCLSAFTPSPTLDKPLLKYVSDHGPGEYRSLCQHKLLTSLQLPAPAARVYPPTQLEWTANQRKGTMLLDVHTYNDEKLTTEVESWTTGEELAAWLLHYRGAPEAVQGWSVSLLTDEGWSDLAGSDFVLDLLAGAEAEVLPPPGTPSSTHSDYLFSSQGDRMPATDLDDFIPPAPPMQAPGLPAFEGSSWGRDYPQEGRGRQMDAYVDDLFDPVLDQGPPDMERVAMLNRRMKGGGGIGPMYGAGIPMTMPTYPMVNPSIQSYGAPMMPTMTMPGAL
SIO_010081: LOC117439356
subclass of: SO_0000673
so part of: LOC117439356
location: join(783305..783307,783428..783485,783574..783698,784183..784278,784357..784592,786604..786773,786860..786932,787280..787462,787555..787664,788209..788276,788993..789065,790504..790536,790668..790724,794732..794742)
location: region:783305-794742:1
so has part: feature:783305-783307:1:exon
so has part: feature:783428-783485:1:exon
so has part: feature:783574-783698:1:exon
so has part: feature:784183-784278:1:exon
so has part: feature:784357-784592:1:exon
so has part: feature:786604-786773:1:exon
so has part: feature:786860-786932:1:exon
so has part: feature:787280-787462:1:exon
so has part: feature:787555-787664:1:exon
so has part: feature:788209-788276:1:exon
so has part: feature:788993-789065:1:exon
so has part: feature:790504-790536:1:exon
so has part: feature:790668-790724:1:exon
so has part: feature:794732-794742:1:exon

XP_033931160.1
type: Protein
SIO_000068: ncbiprotein

position:783305:1
position: 783305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783305-783307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:783428-783485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:783574-783698:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:784183-784278:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:784357-784592:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786604-786773:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:786860-786932:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:787280-787462:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:787555-787664:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:788209-788276:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:788993-789065:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:790504-790536:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:790668-790724:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:794732-794742:1:exon

LOC117439256
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(799993..800436)
location: region:799993-800436:-1
so has part: feature:799993-800436:-1:exon
subclass of: SO_0000011

117439256
type: Gene
SIO_000068: ncbigene

position:799993:-1
position: 799993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800436:-1
position: 800436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:799993-800436:-1:exon

LOC117439256
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117439256
product: uncharacterized LOC117439256
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004551138.1
SIO_010081: LOC117439256
subclass of: SO_0000673
so part of: LOC117439256
location: complement(join(799993..800015,800131..800249,800343..800436))
location: region:799993-800436:-1
so has part: feature:800343-800436:-1:exon
so has part: feature:800131-800249:-1:exon
so has part: feature:799993-800015:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:800343-800436:-1:exon

position:800343:-1
position: 800343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:800131-800249:-1:exon

position:800131:-1
position: 800131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800249:-1
position: 800249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:799993-800015:-1:exon

position:800015:-1
position: 800015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439357
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439357
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(800517..804108)
location: region:800517-804108:-1
so has part: feature:800517-804108:-1:exon

117439357
type: Gene
SIO_000068: ncbigene

position:800517:-1
position: 800517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804108:-1
position: 804108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:800517-804108:-1:exon

LOC117439357
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439357
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439357
subclass of: SO_0000673
so part of: LOC117439357
location: complement(800517..800605)
location: region:800517-800605:-1
so has part: feature:800517-800605:-1:exon

position:800605:-1
position: 800605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:800517-800605:-1:exon

LOC117439357
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439357
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439357
subclass of: SO_0000673
so part of: LOC117439357
location: complement(800899..801332)
location: region:800899-801332:-1
so has part: feature:800899-801332:-1:exon

position:800899:-1
position: 800899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801332:-1
position: 801332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:800899-801332:-1:exon

LOC117439357
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439357
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439357
subclass of: SO_0000673
so part of: LOC117439357
location: complement(801495..801636)
location: region:801495-801636:-1
so has part: feature:801495-801636:-1:exon

position:801495:-1
position: 801495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801636:-1
position: 801636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:801495-801636:-1:exon

LOC117439357
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439357
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439357
subclass of: SO_0000673
so part of: LOC117439357
location: complement(801734..801926)
location: region:801734-801926:-1
so has part: feature:801734-801926:-1:exon

position:801734:-1
position: 801734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801926:-1
position: 801926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:801734-801926:-1:exon

LOC117439357
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439357
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439357
subclass of: SO_0000673
so part of: LOC117439357
location: complement(802044..802148)
location: region:802044-802148:-1
so has part: feature:802044-802148:-1:exon

position:802044:-1
position: 802044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802148:-1
position: 802148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802044-802148:-1:exon

LOC117439357
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439357
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439357
subclass of: SO_0000673
so part of: LOC117439357
location: complement(802367..802549)
location: region:802367-802549:-1
so has part: feature:802367-802549:-1:exon

position:802367:-1
position: 802367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802549:-1
position: 802549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802367-802549:-1:exon

LOC117439357
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439357
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439357
subclass of: SO_0000673
so part of: LOC117439357
location: complement(802844..802983)
location: region:802844-802983:-1
so has part: feature:802844-802983:-1:exon

position:802844:-1
position: 802844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802983:-1
position: 802983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802844-802983:-1:exon

LOC117439253
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 802949..829349
location: region:802949-829349:1
so has part: feature:802949-829349:1:exon
subclass of: SO_0000010

117439253
type: Gene
SIO_000068: ncbigene

position:802949:1
position: 802949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829349:1
position: 829349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802949-829349:1:exon

LOC117439253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439253
product: unconventional myosin-XV-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034075102.1
SIO_010081: LOC117439253
subclass of: SO_0000673
so part of: LOC117439253
location: join(802949..802969,808806..808936,809586..809680,809777..809854,809947..810043,810859..811007,811297..811424,812852..812985,813069..813202,828261..828401,829218..829349)
location: region:802949-829349:1
so has part: feature:802949-802969:1:exon
so has part: feature:808806-808936:1:exon
so has part: feature:809586-809680:1:exon
so has part: feature:809777-809854:1:exon
so has part: feature:809947-810043:1:exon
so has part: feature:810859-811007:1:exon
so has part: feature:811297-811424:1:exon
so has part: feature:812852-812985:1:exon
so has part: feature:813069-813202:1:exon
so has part: feature:828261-828401:1:exon
so has part: feature:829218-829349:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:802949-802969:1:exon

position:802969:1
position: 802969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:808806-808936:1:exon

position:808806:1
position: 808806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808936:1
position: 808936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:809586-809680:1:exon

position:809586:1
position: 809586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809680:1
position: 809680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:809777-809854:1:exon

position:809777:1
position: 809777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809854:1
position: 809854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:809947-810043:1:exon

position:809947:1
position: 809947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810043:1
position: 810043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:810859-811007:1:exon

position:810859:1
position: 810859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811007:1
position: 811007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:811297-811424:1:exon

position:811297:1
position: 811297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811424:1
position: 811424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:812852-812985:1:exon

position:812852:1
position: 812852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812985:1
position: 812985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:813069-813202:1:exon

position:813069:1
position: 813069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813202:1
position: 813202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:828261-828401:1:exon

position:828261:1
position: 828261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828401:1
position: 828401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:829218-829349:1:exon

position:829218:1
position: 829218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117439357
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439357
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439357
subclass of: SO_0000673
so part of: LOC117439357
location: complement(803139..804108)
location: region:803139-804108:-1
so has part: feature:803139-804108:-1:exon

position:803139:-1
position: 803139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803139-804108:-1:exon

LOC117439253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439253
product: unconventional myosin-XV-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034075101.1
SIO_010081: LOC117439253
subclass of: SO_0000673
so part of: LOC117439253
location: join(806979..807020,808806..808936,809586..809680,809777..809854,809947..810043,810859..811007,811297..811424,812852..812985,813069..813202,828261..828401,829218..829349)
location: region:806979-829349:1
so has part: feature:806979-807020:1:exon
so has part: feature:808806-808936:1:exon
so has part: feature:809586-809680:1:exon
so has part: feature:809777-809854:1:exon
so has part: feature:809947-810043:1:exon
so has part: feature:810859-811007:1:exon
so has part: feature:811297-811424:1:exon
so has part: feature:812852-812985:1:exon
so has part: feature:813069-813202:1:exon
so has part: feature:828261-828401:1:exon
so has part: feature:829218-829349:1:exon

position:806979:1
position: 806979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806979-807020:1:exon

position:807020:1
position: 807020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:808806-808936:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809586-809680:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:809777-809854:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:809947-810043:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810859-811007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:811297-811424:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:812852-812985:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:813069-813202:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:828261-828401:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829218-829349:1:exon

LOC117439253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-XV-like
translation: MTGFFPCSDTLQPFVTRHLQDISQDYQHPYQELACVCQENMQRSLTFGGRRNIPSHVEIDAILAGKTSRRVPIQLPGEVEFPIKIRSFSLAGEAVTDFCKEMGVLTLTEIKEFSILANRRQDGMVRPLHAEEYLFDFLLDDGSIFLSLRRVMWRSPLTFSSDLYVDFHYQQLLADYLSGPLLLAPADGSSSVQQLAQLSALQHLAQGLQGAPSLAEMKEYLPSLDGLSIKAAEIQTFCEGQIAAMHSLSPQNAKIQCIEFLSAMPLFGSNTFLAQKVSQQGCPSPCMVSISQEGVLFLHPKTKKRVFQIPLADVQSMLTVRPKKHGKVPAVDISYGNPGRPKRVTIHLKQAKELCHILAQIMEELIRPAVSSSISSRQ
SIO_010081: LOC117439253
subclass of: SO_0000673
so part of: LOC117439253
location: join(808843..808936,809586..809680,809777..809854,809947..810043,810859..811007,811297..811424,812852..812985,813069..813202,828261..828401,829218..829304)
location: region:808843-829304:1
so has part: feature:808843-808936:1:exon
so has part: feature:809586-809680:1:exon
so has part: feature:809777-809854:1:exon
so has part: feature:809947-810043:1:exon
so has part: feature:810859-811007:1:exon
so has part: feature:811297-811424:1:exon
so has part: feature:812852-812985:1:exon
so has part: feature:813069-813202:1:exon
so has part: feature:828261-828401:1:exon
so has part: feature:829218-829304:1:exon

XP_033930992.1
type: Protein
SIO_000068: ncbiprotein

position:808843:1
position: 808843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829304:1
position: 829304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808843-808936:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:809586-809680:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809777-809854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:809947-810043:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:810859-811007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:811297-811424:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:812852-812985:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:813069-813202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:828261-828401:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:829218-829304:1:exon

LOC117439253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-XV-like
translation: MTGFFPCSDTLQPFVTRHLQDISQDYQHPYQELACVCQENMQRSLTFGGRRNIPSHVEIDAILAGKTSRRVPIQLPGEVEFPIKIRSFSLAGEAVTDFCKEMGVLTLTEIKEFSILANRRQDGMVRPLHAEEYLFDFLLDDGSIFLSLRRVMWRSPLTFSSDLYVDFHYQQLLADYLSGPLLLAPADGSSSVQQLAQLSALQHLAQGLQGAPSLAEMKEYLPSLDGLSIKAAEIQTFCEGQIAAMHSLSPQNAKIQCIEFLSAMPLFGSNTFLAQKVSQQGCPSPCMVSISQEGVLFLHPKTKKRVFQIPLADVQSMLTVRPKKHGKVPAVDISYGNPGRPKRVTIHLKQAKELCHILAQIMEELIRPAVSSSISSRQ
SIO_010081: LOC117439253
subclass of: SO_0000673
so part of: LOC117439253
location: join(808843..808936,809586..809680,809777..809854,809947..810043,810859..811007,811297..811424,812852..812985,813069..813202,828261..828401,829218..829304)
location: region:808843-829304:1
so has part: feature:808843-808936:1:exon
so has part: feature:809586-809680:1:exon
so has part: feature:809777-809854:1:exon
so has part: feature:809947-810043:1:exon
so has part: feature:810859-811007:1:exon
so has part: feature:811297-811424:1:exon
so has part: feature:812852-812985:1:exon
so has part: feature:813069-813202:1:exon
so has part: feature:828261-828401:1:exon
so has part: feature:829218-829304:1:exon

XP_033930993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:808843-808936:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:809586-809680:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809777-809854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:809947-810043:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:810859-811007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:811297-811424:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:812852-812985:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:813069-813202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:828261-828401:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:829218-829304:1:exon

LOC117439255
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 814572..815258
location: region:814572-815258:1
so has part: feature:814572-815258:1:exon
subclass of: SO_0000010

117439255
type: Gene
SIO_000068: ncbigene

position:814572:1
position: 814572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815258:1
position: 815258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:814572-815258:1:exon

LOC117439255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439255
product: zinc finger protein 143-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034075103.1
SIO_010081: LOC117439255
subclass of: SO_0000673
so part of: LOC117439255
location: join(814572..814620,814651..815258)
location: region:814572-815258:1
so has part: feature:814572-814620:1:exon
so has part: feature:814651-815258:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:814572-814620:1:exon

position:814620:1
position: 814620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:814651-815258:1:exon

position:814651:1
position: 814651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117439255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 143-like
translation: MRQTPCDPEPFCCSVYHMDHKGCSVYHMDHKGCSVYHMDLKGCSVYHMDHKGCSVYHMDHKGCSVYHMDHKGCSVYHMDHKGCSVYHMDLKGCSVYHMDHKGCSVYHMDHKGCSVYHMDHKGCSVYHMDHKGCSVYHMDHKGCSVYHMDHKGCSVYHMDHKGCSVYHMDHKGCSVYHMDHKGCSVYHMDHKGCSVYHMNHKEQQHIEI
SIO_010081: LOC117439255
subclass of: SO_0000673
so part of: LOC117439255
location: join(814587..814620,814651..815243)
location: region:814587-815243:1
so has part: feature:814587-814620:1:exon
so has part: feature:814651-815243:1:exon

XP_033930994.1
type: Protein
SIO_000068: ncbiprotein

position:814587:1
position: 814587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815243:1
position: 815243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:814587-814620:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:814651-815243:1:exon

LOC117439252
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(815404..819781)
location: region:815404-819781:-1
so has part: feature:815404-819781:-1:exon
subclass of: SO_0000010

117439252
type: Gene
SIO_000068: ncbigene

position:815404:-1
position: 815404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819781:-1
position: 819781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:815404-819781:-1:exon

LOC117439252
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439252
product: uncharacterized LOC117439252, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034075100.1
SIO_010081: LOC117439252
subclass of: SO_0000673
so part of: LOC117439252
location: complement(join(815404..815740,816003..816098,816264..816431,817025..817981,819550..819781))
location: region:815404-819781:-1
so has part: feature:819550-819781:-1:exon
so has part: feature:817025-817981:-1:exon
so has part: feature:816264-816431:-1:exon
so has part: feature:816003-816098:-1:exon
so has part: feature:815404-815740:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:819550-819781:-1:exon

position:819550:-1
position: 819550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:817025-817981:-1:exon

position:817025:-1
position: 817025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817981:-1
position: 817981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:816264-816431:-1:exon

position:816264:-1
position: 816264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816431:-1
position: 816431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:816003-816098:-1:exon

position:816003:-1
position: 816003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816098:-1
position: 816098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:815404-815740:-1:exon

position:815740:-1
position: 815740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439252
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439252
product: uncharacterized LOC117439252, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034075099.1
SIO_010081: LOC117439252
subclass of: SO_0000673
so part of: LOC117439252
location: complement(join(815404..815740,816003..816098,816264..816431,817025..817981,819545..819780))
location: region:815404-819780:-1
so has part: feature:819545-819780:-1:exon
so has part: feature:817025-817981:-1:exon
so has part: feature:816264-816431:-1:exon
so has part: feature:816003-816098:-1:exon
so has part: feature:815404-815740:-1:exon

position:819780:-1
position: 819780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819545-819780:-1:exon

position:819545:-1
position: 819545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:817025-817981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:816264-816431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:816003-816098:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:815404-815740:-1:exon

LOC117439252
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117439252
translation: MAAQNYILHVHTSMDIIRKMTLSSSPESVDELKTMIKEKFKLDFDFNLSYQDPDFDGRLCSLVDIEELPLKAVLLVTKSESDASSEASEDTTILPHDITPERAEGWPAVFPVPTFALQIELLLNEGNRTHERTEKTLKLSRGQKHIILENLATKMHSFKAYPNDKEVSIVAEALVTKHPCLKEPGSQTGWCGWRNSLKFKMGNFRTKLSRAGFHEVAVNSGKRSRNNPDKQAPHCNIKRPKRAEVNFLPNFPLGEDGTSLERLRLQLVEEVKMRDKNLPLIAKLMQTTFALRRNEVINDELPVGQILERWPALKIESQICAEFQRIANINLKKHFYAELDRHAPRLQSLFRKKAARKGKVAEGLDQRFSSYDLQEQGDVHVLRAAVLRALPAYLHEDDSRFLKSWHVAQSDEPDIDDMAVGLLLISAKSENSTLCCPERIAVVLEGSRVFELPRLAEAFILLYALIYALNLRYPKDLANTFDFTQKVLMGQDDRKLRPRVLSLKNVLLAAQ
SIO_010081: LOC117439252
subclass of: SO_0000673
so part of: LOC117439252
location: complement(join(815423..815740,816003..816098,816264..816431,817025..817978))
location: region:815423-817978:-1
so has part: feature:817025-817978:-1:exon
so has part: feature:816264-816431:-1:exon
so has part: feature:816003-816098:-1:exon
so has part: feature:815423-815740:-1:exon

XP_033930990.1
type: Protein
SIO_000068: ncbiprotein

position:815423:-1
position: 815423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817978:-1
position: 817978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817025-817978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:816264-816431:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:816003-816098:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:815423-815740:-1:exon

LOC117439252
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117439252
translation: MAAQNYILHVHTSMDIIRKMTLSSSPESVDELKTMIKEKFKLDFDFNLSYQDPDFDGRLCSLVDIEELPLKAVLLVTKSESDASSEASEDTTILPHDITPERAEGWPAVFPVPTFALQIELLLNEGNRTHERTEKTLKLSRGQKHIILENLATKMHSFKAYPNDKEVSIVAEALVTKHPCLKEPGSQTGWCGWRNSLKFKMGNFRTKLSRAGFHEVAVNSGKRSRNNPDKQAPHCNIKRPKRAEVNFLPNFPLGEDGTSLERLRLQLVEEVKMRDKNLPLIAKLMQTTFALRRNEVINDELPVGQILERWPALKIESQICAEFQRIANINLKKHFYAELDRHAPRLQSLFRKKAARKGKVAEGLDQRFSSYDLQEQGDVHVLRAAVLRALPAYLHEDDSRFLKSWHVAQSDEPDIDDMAVGLLLISAKSENSTLCCPERIAVVLEGSRVFELPRLAEAFILLYALIYALNLRYPKDLANTFDFTQKVLMGQDDRKLRPRVLSLKNVLLAAQ
SIO_010081: LOC117439252
subclass of: SO_0000673
so part of: LOC117439252
location: complement(join(815423..815740,816003..816098,816264..816431,817025..817978))
location: region:815423-817978:-1
so has part: feature:817025-817978:-1:exon
so has part: feature:816264-816431:-1:exon
so has part: feature:816003-816098:-1:exon
so has part: feature:815423-815740:-1:exon

XP_033930991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:817025-817978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:816264-816431:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:816003-816098:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:815423-815740:-1:exon

tmem94
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: tmem94
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 833116..880187
location: region:833116-880187:1
so has part: feature:833116-880187:1:exon
subclass of: SO_0000010

117468454
type: Gene
SIO_000068: ncbigene

position:833116:1
position: 833116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880187:1
position: 880187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833116-880187:1:exon

tmem94
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: tmem94
product: transmembrane protein 94, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034112579.1
SIO_010081: tmem94
subclass of: SO_0000673
so part of: tmem94
location: join(833116..833220,834902..835267,855301..855420,855526..855653,857573..857709,858309..858514,859152..859303,859684..859786,859870..859956,860156..860272,861137..861193,862982..863086,863386..863559,863790..864005,864368..864674,865260..865433,865813..865915,866042..866250,866339..866520,867499..867619,868696..868811,869068..869167,873067..873175,873371..873560,873643..873720,873821..873906,873995..874076,874819..874985,875087..875181,875285..875378,876733..876903,877808..880187)
location: region:833116-880187:1
so has part: feature:833116-833220:1:exon
so has part: feature:834902-835267:1:exon
so has part: feature:855301-855420:1:exon
so has part: feature:855526-855653:1:exon
so has part: feature:857573-857709:1:exon
so has part: feature:858309-858514:1:exon
so has part: feature:859152-859303:1:exon
so has part: feature:859684-859786:1:exon
so has part: feature:859870-859956:1:exon
so has part: feature:860156-860272:1:exon
so has part: feature:861137-861193:1:exon
so has part: feature:862982-863086:1:exon
so has part: feature:863386-863559:1:exon
so has part: feature:863790-864005:1:exon
so has part: feature:864368-864674:1:exon
so has part: feature:865260-865433:1:exon
so has part: feature:865813-865915:1:exon
so has part: feature:866042-866250:1:exon
so has part: feature:866339-866520:1:exon
so has part: feature:867499-867619:1:exon
so has part: feature:868696-868811:1:exon
so has part: feature:869068-869167:1:exon
so has part: feature:873067-873175:1:exon
so has part: feature:873371-873560:1:exon
so has part: feature:873643-873720:1:exon
so has part: feature:873821-873906:1:exon
so has part: feature:873995-874076:1:exon
so has part: feature:874819-874985:1:exon
so has part: feature:875087-875181:1:exon
so has part: feature:875285-875378:1:exon
so has part: feature:876733-876903:1:exon
so has part: feature:877808-880187:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:833116-833220:1:exon

position:833220:1
position: 833220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:834902-835267:1:exon

position:834902:1
position: 834902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835267:1
position: 835267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:855301-855420:1:exon

position:855301:1
position: 855301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855420:1
position: 855420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:855526-855653:1:exon

position:855526:1
position: 855526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855653:1
position: 855653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:857573-857709:1:exon

position:857573:1
position: 857573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857709:1
position: 857709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:858309-858514:1:exon

position:858309:1
position: 858309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858514:1
position: 858514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:859152-859303:1:exon

position:859152:1
position: 859152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859303:1
position: 859303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:859684-859786:1:exon

position:859684:1
position: 859684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859786:1
position: 859786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:859870-859956:1:exon

position:859870:1
position: 859870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859956:1
position: 859956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:860156-860272:1:exon

position:860156:1
position: 860156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860272:1
position: 860272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:861137-861193:1:exon

position:861137:1
position: 861137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861193:1
position: 861193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:862982-863086:1:exon

position:862982:1
position: 862982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:863086:1
position: 863086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:863386-863559:1:exon

position:863386:1
position: 863386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:863559:1
position: 863559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:863790-864005:1:exon

position:863790:1
position: 863790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864005:1
position: 864005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:864368-864674:1:exon

position:864368:1
position: 864368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864674:1
position: 864674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:865260-865433:1:exon

position:865260:1
position: 865260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865433:1
position: 865433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:865813-865915:1:exon

position:865813:1
position: 865813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865915:1
position: 865915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:866042-866250:1:exon

position:866042:1
position: 866042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866250:1
position: 866250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:866339-866520:1:exon

position:866339:1
position: 866339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866520:1
position: 866520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:867499-867619:1:exon

position:867499:1
position: 867499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867619:1
position: 867619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:868696-868811:1:exon

position:868696:1
position: 868696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868811:1
position: 868811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:869068-869167:1:exon

position:869068:1
position: 869068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869167:1
position: 869167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:873067-873175:1:exon

position:873067:1
position: 873067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873175:1
position: 873175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:873371-873560:1:exon

position:873371:1
position: 873371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873560:1
position: 873560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:873643-873720:1:exon

position:873643:1
position: 873643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873720:1
position: 873720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:873821-873906:1:exon

position:873821:1
position: 873821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873906:1
position: 873906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:873995-874076:1:exon

position:873995:1
position: 873995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874076:1
position: 874076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:874819-874985:1:exon

position:874819:1
position: 874819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874985:1
position: 874985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:875087-875181:1:exon

position:875087:1
position: 875087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875181:1
position: 875181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:875285-875378:1:exon

position:875285:1
position: 875285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875378:1
position: 875378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:876733-876903:1:exon

position:876733:1
position: 876733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876903:1
position: 876903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:877808-880187:1:exon

position:877808:1
position: 877808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmem94
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: tmem94
product: transmembrane protein 94, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_034112580.1
SIO_010081: tmem94
subclass of: SO_0000673
so part of: tmem94
location: join(833116..833220,834902..835267,855301..855420,855526..855653,857573..857709,858309..858514,859152..859303,859684..859786,859870..859956,860156..860272,862982..863086,863386..863559,863790..864005,864368..864674,865260..865433,865813..865915,866042..866250,866339..866520,867499..867619,868696..868811,869068..869167,873067..873175,873371..873560,873643..873720,873821..873906,873995..874076,874819..874985,875087..875181,875285..875378,876733..876903,877808..880187)
location: region:833116-880187:1
so has part: feature:833116-833220:1:exon
so has part: feature:834902-835267:1:exon
so has part: feature:855301-855420:1:exon
so has part: feature:855526-855653:1:exon
so has part: feature:857573-857709:1:exon
so has part: feature:858309-858514:1:exon
so has part: feature:859152-859303:1:exon
so has part: feature:859684-859786:1:exon
so has part: feature:859870-859956:1:exon
so has part: feature:860156-860272:1:exon
so has part: feature:862982-863086:1:exon
so has part: feature:863386-863559:1:exon
so has part: feature:863790-864005:1:exon
so has part: feature:864368-864674:1:exon
so has part: feature:865260-865433:1:exon
so has part: feature:865813-865915:1:exon
so has part: feature:866042-866250:1:exon
so has part: feature:866339-866520:1:exon
so has part: feature:867499-867619:1:exon
so has part: feature:868696-868811:1:exon
so has part: feature:869068-869167:1:exon
so has part: feature:873067-873175:1:exon
so has part: feature:873371-873560:1:exon
so has part: feature:873643-873720:1:exon
so has part: feature:873821-873906:1:exon
so has part: feature:873995-874076:1:exon
so has part: feature:874819-874985:1:exon
so has part: feature:875087-875181:1:exon
so has part: feature:875285-875378:1:exon
so has part: feature:876733-876903:1:exon
so has part: feature:877808-880187:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:833116-833220:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:834902-835267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:855301-855420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855526-855653:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:857573-857709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:858309-858514:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:859152-859303:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:859684-859786:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:859870-859956:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:860156-860272:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:862982-863086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:863386-863559:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:863790-864005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:864368-864674:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:865260-865433:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:865813-865915:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:866042-866250:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:866339-866520:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:867499-867619:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:868696-868811:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:869068-869167:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:873067-873175:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:873371-873560:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:873643-873720:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:873821-873906:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:873995-874076:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:874819-874985:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:875087-875181:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:875285-875378:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:876733-876903:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:877808-880187:1:exon

tmem94
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: tmem94
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 94 isoform X1
translation: MELQDKKKEEDALPLGLSTGQALLKLQDQLSSLLEQHQRAARRRVSAQEQWVNSFLYHGNRHSCLHWPGAALTLLVVLGLLCCHGSQPKGSSGIELVNAAALLLLFLLNLLLVGRQERLKRTEMVRRLKGIISQLSDYLSGCVGEVPWSPSQYPDLYTPSSPSWSLHWTYRDSQLVNLPISLLVEGDIIALRPGQEAFASLRGIKDDEHIVLEPGDLFPPFSPPPSPRSTEKRGPQSPQQHRLFRVVRTPVLDIVSNSLEMALARPITVLDNERFTVQSVITKHVCPVVLVAFLLVNTVRYFIDAPSLTPARFHFFQLQLMGVLPVLPLLFPVMWVLLNAFGEARVLAEFSRASPAGLLAKFSEDTLSSYTEVASSQELLRCVWRHLLGVLKGESQTLCYTSSLLHTLGSVTVLCCVDKQGILSWPNPSPETVLFFSGRVEPPHNSQDDLRDDLSVSSYCRMEADDDRDEEAEALLCLPAEPSTQMGEGPEPSETSHDTARSSDTFQQRRACQPAPTRTKHHSGSNVSFSRDTEGGENDPGQDFGCPEAEADDFVCDYHLEMLSLSQDQQNPTSIQFDDLSWQCHLPSLKPLGLNIMLNLCNASVTQQLCRFSDHLSNLALQESHGSVLPVCVPWGLCELSRLIGFTPGARELFRQENHLALYQLPSGEKNKELSSRRLHYFTKRQPPISHLISLFVRDSSSNNVQMLSHGSADLILESCTDFWDGTDIYPLSGSDRKKVLDFYQRACLSGYCSAFAYKPMQVSLSSQLNGMCVELAPSPGLFSGVELPSTTPIKQNSCRNSWSSDEGIGEGVEREDCVQALSGQIFMGMVSSQFQARLDTVRLIDSLVTACIRFVYFSMEDELRSKVFAEKMGLETGWNCHISLTPNGESPCDGAPSSPTQGSMHEDSRDEAEGPLLTEEEAHSDLASFQPTDSDVPSFLEDCNRAKLPRGIHQVRPHLKNIDNVPLLVPLFTDCTPDTMCEMMKIMQENREVTCCLGSSANFRNSRLFLQSNLSIALDPLYPSQCSWETFGYATGGFSDRDAECLSPLRLSGQLNSLGCSVTFHQGESVSMVKLIEQARHTTYGIRKCFLFLLQCQLSLVILQFLACLAQLPPPMNTTDILWMSCFSCPLLSVSFLGKPPESSVMTVATGKNLDAIPRKTQNYFLGCFLLKFGLTVCAYLVAFGFTLQQFCCSSCSSSTLAENTTVTCLHILAASSSVDAPQWFGELSNGLLLTQKVMAGFLVLHTVVISLSYVHRSQPLWRKSPFSNTWWCLTVPVVLLSQLVQATVDYQLWRDRGSLRTFDLGDIPLLAWLLVSLSPLLVVVVNEVVKLHEIRVRVRYQKRQKLQFETKLGMNSPF
SIO_010081: tmem94
subclass of: SO_0000673
so part of: tmem94
location: join(835244..835267,855301..855420,855526..855653,857573..857709,858309..858514,859152..859303,859684..859786,859870..859956,860156..860272,861137..861193,862982..863086,863386..863559,863790..864005,864368..864674,865260..865433,865813..865915,866042..866250,866339..866520,867499..867619,868696..868811,869068..869167,873067..873175,873371..873560,873643..873720,873821..873906,873995..874076,874819..874985,875087..875181,875285..875378,876733..876903,877808..877880)
location: region:835244-877880:1
so has part: feature:835244-835267:1:exon
so has part: feature:855301-855420:1:exon
so has part: feature:855526-855653:1:exon
so has part: feature:857573-857709:1:exon
so has part: feature:858309-858514:1:exon
so has part: feature:859152-859303:1:exon
so has part: feature:859684-859786:1:exon
so has part: feature:859870-859956:1:exon
so has part: feature:860156-860272:1:exon
so has part: feature:861137-861193:1:exon
so has part: feature:862982-863086:1:exon
so has part: feature:863386-863559:1:exon
so has part: feature:863790-864005:1:exon
so has part: feature:864368-864674:1:exon
so has part: feature:865260-865433:1:exon
so has part: feature:865813-865915:1:exon
so has part: feature:866042-866250:1:exon
so has part: feature:866339-866520:1:exon
so has part: feature:867499-867619:1:exon
so has part: feature:868696-868811:1:exon
so has part: feature:869068-869167:1:exon
so has part: feature:873067-873175:1:exon
so has part: feature:873371-873560:1:exon
so has part: feature:873643-873720:1:exon
so has part: feature:873821-873906:1:exon
so has part: feature:873995-874076:1:exon
so has part: feature:874819-874985:1:exon
so has part: feature:875087-875181:1:exon
so has part: feature:875285-875378:1:exon
so has part: feature:876733-876903:1:exon
so has part: feature:877808-877880:1:exon

XP_033968470.1
type: Protein
SIO_000068: ncbiprotein

position:835244:1
position: 835244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877880:1
position: 877880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835244-835267:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:855301-855420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:855526-855653:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857573-857709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858309-858514:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:859152-859303:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:859684-859786:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:859870-859956:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:860156-860272:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:861137-861193:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:862982-863086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:863386-863559:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:863790-864005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:864368-864674:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:865260-865433:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:865813-865915:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:866042-866250:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:866339-866520:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:867499-867619:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:868696-868811:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:869068-869167:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:873067-873175:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:873371-873560:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:873643-873720:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:873821-873906:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:873995-874076:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:874819-874985:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:875087-875181:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:875285-875378:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:876733-876903:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:877808-877880:1:exon

tmem94
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: tmem94
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 94 isoform X2
translation: MELQDKKKEEDALPLGLSTGQALLKLQDQLSSLLEQHQRAARRRVSAQEQWVNSFLYHGNRHSCLHWPGAALTLLVVLGLLCCHGSQPKGSSGIELVNAAALLLLFLLNLLLVGRQERLKRTEMVRRLKGIISQLSDYLSGCVGEVPWSPSQYPDLYTPSSPSWSLHWTYRDSQLVNLPISLLVEGDIIALRPGQEAFASLRGIKDDEHIVLEPGDLFPPFSPPPSPRSTEKRGPQSPQQHRLFRVVRTPVLDIVSNSLEMALARPITVLDNERFTVQSVITKHVCPVVLVAFLLVNTVRYFIDAPSLTPARFHFFQLQLMGVLPVLPLLFPVMWVLLNAFGEARVLAEFSRASPAGLELLRCVWRHLLGVLKGESQTLCYTSSLLHTLGSVTVLCCVDKQGILSWPNPSPETVLFFSGRVEPPHNSQDDLRDDLSVSSYCRMEADDDRDEEAEALLCLPAEPSTQMGEGPEPSETSHDTARSSDTFQQRRACQPAPTRTKHHSGSNVSFSRDTEGGENDPGQDFGCPEAEADDFVCDYHLEMLSLSQDQQNPTSIQFDDLSWQCHLPSLKPLGLNIMLNLCNASVTQQLCRFSDHLSNLALQESHGSVLPVCVPWGLCELSRLIGFTPGARELFRQENHLALYQLPSGEKNKELSSRRLHYFTKRQPPISHLISLFVRDSSSNNVQMLSHGSADLILESCTDFWDGTDIYPLSGSDRKKVLDFYQRACLSGYCSAFAYKPMQVSLSSQLNGMCVELAPSPGLFSGVELPSTTPIKQNSCRNSWSSDEGIGEGVEREDCVQALSGQIFMGMVSSQFQARLDTVRLIDSLVTACIRFVYFSMEDELRSKVFAEKMGLETGWNCHISLTPNGESPCDGAPSSPTQGSMHEDSRDEAEGPLLTEEEAHSDLASFQPTDSDVPSFLEDCNRAKLPRGIHQVRPHLKNIDNVPLLVPLFTDCTPDTMCEMMKIMQENREVTCCLGSSANFRNSRLFLQSNLSIALDPLYPSQCSWETFGYATGGFSDRDAECLSPLRLSGQLNSLGCSVTFHQGESVSMVKLIEQARHTTYGIRKCFLFLLQCQLSLVILQFLACLAQLPPPMNTTDILWMSCFSCPLLSVSFLGKPPESSVMTVATGKNLDAIPRKTQNYFLGCFLLKFGLTVCAYLVAFGFTLQQFCCSSCSSSTLAENTTVTCLHILAASSSVDAPQWFGELSNGLLLTQKVMAGFLVLHTVVISLSYVHRSQPLWRKSPFSNTWWCLTVPVVLLSQLVQATVDYQLWRDRGSLRTFDLGDIPLLAWLLVSLSPLLVVVVNEVVKLHEIRVRVRYQKRQKLQFETKLGMNSPF
SIO_010081: tmem94
subclass of: SO_0000673
so part of: tmem94
location: join(835244..835267,855301..855420,855526..855653,857573..857709,858309..858514,859152..859303,859684..859786,859870..859956,860156..860272,862982..863086,863386..863559,863790..864005,864368..864674,865260..865433,865813..865915,866042..866250,866339..866520,867499..867619,868696..868811,869068..869167,873067..873175,873371..873560,873643..873720,873821..873906,873995..874076,874819..874985,875087..875181,875285..875378,876733..876903,877808..877880)
location: region:835244-877880:1
so has part: feature:835244-835267:1:exon
so has part: feature:855301-855420:1:exon
so has part: feature:855526-855653:1:exon
so has part: feature:857573-857709:1:exon
so has part: feature:858309-858514:1:exon
so has part: feature:859152-859303:1:exon
so has part: feature:859684-859786:1:exon
so has part: feature:859870-859956:1:exon
so has part: feature:860156-860272:1:exon
so has part: feature:862982-863086:1:exon
so has part: feature:863386-863559:1:exon
so has part: feature:863790-864005:1:exon
so has part: feature:864368-864674:1:exon
so has part: feature:865260-865433:1:exon
so has part: feature:865813-865915:1:exon
so has part: feature:866042-866250:1:exon
so has part: feature:866339-866520:1:exon
so has part: feature:867499-867619:1:exon
so has part: feature:868696-868811:1:exon
so has part: feature:869068-869167:1:exon
so has part: feature:873067-873175:1:exon
so has part: feature:873371-873560:1:exon
so has part: feature:873643-873720:1:exon
so has part: feature:873821-873906:1:exon
so has part: feature:873995-874076:1:exon
so has part: feature:874819-874985:1:exon
so has part: feature:875087-875181:1:exon
so has part: feature:875285-875378:1:exon
so has part: feature:876733-876903:1:exon
so has part: feature:877808-877880:1:exon

XP_033968471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:835244-835267:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:855301-855420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:855526-855653:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857573-857709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858309-858514:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:859152-859303:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:859684-859786:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:859870-859956:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:860156-860272:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:862982-863086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:863386-863559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:863790-864005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:864368-864674:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:865260-865433:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:865813-865915:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:866042-866250:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:866339-866520:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:867499-867619:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:868696-868811:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:869068-869167:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:873067-873175:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:873371-873560:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:873643-873720:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:873821-873906:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:873995-874076:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:874819-874985:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:875087-875181:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:875285-875378:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:876733-876903:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:877808-877880:1:exon

tdrkh
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: tdrkh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 880856..913934
location: region:880856-913934:1
so has part: feature:880856-913934:1:exon
subclass of: SO_0000010

117439282
type: Gene
SIO_000068: ncbigene

position:880856:1
position: 880856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913934:1
position: 913934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880856-913934:1:exon

tdrkh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: tdrkh
product: tudor and KH domain containing, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034075150.1
SIO_010081: tdrkh
subclass of: SO_0000673
so part of: tdrkh
location: join(880856..880908,889528..889662,891467..891627,891774..891865,892905..893103,900918..901057,901151..901469,901551..901717,903434..903609,905129..905193,905310..905461,907527..907637,909232..909286,913223..913303,913392..913934)
location: region:880856-913934:1
so has part: feature:880856-880908:1:exon
so has part: feature:889528-889662:1:exon
so has part: feature:891467-891627:1:exon
so has part: feature:891774-891865:1:exon
so has part: feature:892905-893103:1:exon
so has part: feature:900918-901057:1:exon
so has part: feature:901151-901469:1:exon
so has part: feature:901551-901717:1:exon
so has part: feature:903434-903609:1:exon
so has part: feature:905129-905193:1:exon
so has part: feature:905310-905461:1:exon
so has part: feature:907527-907637:1:exon
so has part: feature:909232-909286:1:exon
so has part: feature:913223-913303:1:exon
so has part: feature:913392-913934:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:880856-880908:1:exon

position:880908:1
position: 880908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:889528-889662:1:exon

position:889528:1
position: 889528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889662:1
position: 889662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:891467-891627:1:exon

position:891467:1
position: 891467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891627:1
position: 891627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:891774-891865:1:exon

position:891774:1
position: 891774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891865:1
position: 891865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:892905-893103:1:exon

position:892905:1
position: 892905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893103:1
position: 893103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:900918-901057:1:exon

position:900918:1
position: 900918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901057:1
position: 901057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:901151-901469:1:exon

position:901151:1
position: 901151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901469:1
position: 901469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:901551-901717:1:exon

position:901551:1
position: 901551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901717:1
position: 901717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:903434-903609:1:exon

position:903434:1
position: 903434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903609:1
position: 903609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:905129-905193:1:exon

position:905129:1
position: 905129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905193:1
position: 905193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:905310-905461:1:exon

position:905310:1
position: 905310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905461:1
position: 905461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:907527-907637:1:exon

position:907527:1
position: 907527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907637:1
position: 907637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:909232-909286:1:exon

position:909232:1
position: 909232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909286:1
position: 909286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:913223-913303:1:exon

position:913223:1
position: 913223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913303:1
position: 913303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:913392-913934:1:exon

position:913392:1
position: 913392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tdrkh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: tdrkh
product: tudor and KH domain containing, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_034075147.1
SIO_010081: tdrkh
subclass of: SO_0000673
so part of: tdrkh
location: join(880864..880908,891467..891627,891774..891865,892905..893103,900918..901057,901151..901469,901551..901717,903434..903609,905129..905193,905310..905461,907527..907637,909232..909286,913223..913303,913392..913934)
location: region:880864-913934:1
so has part: feature:880864-880908:1:exon
so has part: feature:891467-891627:1:exon
so has part: feature:891774-891865:1:exon
so has part: feature:892905-893103:1:exon
so has part: feature:900918-901057:1:exon
so has part: feature:901151-901469:1:exon
so has part: feature:901551-901717:1:exon
so has part: feature:903434-903609:1:exon
so has part: feature:905129-905193:1:exon
so has part: feature:905310-905461:1:exon
so has part: feature:907527-907637:1:exon
so has part: feature:909232-909286:1:exon
so has part: feature:913223-913303:1:exon
so has part: feature:913392-913934:1:exon

position:880864:1
position: 880864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880864-880908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891467-891627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891774-891865:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892905-893103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:900918-901057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901151-901469:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:901551-901717:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:903434-903609:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905129-905193:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905310-905461:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:907527-907637:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:909232-909286:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:913223-913303:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913392-913934:1:exon

tdrkh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: tdrkh
product: tudor and KH domain containing, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034075146.1
SIO_010081: tdrkh
subclass of: SO_0000673
so part of: tdrkh
location: join(880874..880908,889531..889662,891467..891627,891774..891865,892905..893103,900918..901057,901151..901469,901551..901717,903434..903609,905129..905193,905310..905461,907527..907637,909232..909286,913223..913303,913392..913934)
location: region:880874-913934:1
so has part: feature:880874-880908:1:exon
so has part: feature:889531-889662:1:exon
so has part: feature:891467-891627:1:exon
so has part: feature:891774-891865:1:exon
so has part: feature:892905-893103:1:exon
so has part: feature:900918-901057:1:exon
so has part: feature:901151-901469:1:exon
so has part: feature:901551-901717:1:exon
so has part: feature:903434-903609:1:exon
so has part: feature:905129-905193:1:exon
so has part: feature:905310-905461:1:exon
so has part: feature:907527-907637:1:exon
so has part: feature:909232-909286:1:exon
so has part: feature:913223-913303:1:exon
so has part: feature:913392-913934:1:exon

position:880874:1
position: 880874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880874-880908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:889531-889662:1:exon

position:889531:1
position: 889531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:891467-891627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891774-891865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:892905-893103:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:900918-901057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:901151-901469:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:901551-901717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:903434-903609:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905129-905193:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:905310-905461:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:907527-907637:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:909232-909286:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913223-913303:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:913392-913934:1:exon

tdrkh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: tdrkh
product: tudor and KH domain containing, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034075149.1
SIO_010081: tdrkh
subclass of: SO_0000673
so part of: tdrkh
location: join(880886..880904,891467..891627,891774..891865,892905..893103,900918..901057,901151..901469,901551..901717,903434..903609,905129..905193,905310..905461,907527..907637,909232..909286,913223..913303,913392..913934)
location: region:880886-913934:1
so has part: feature:880886-880904:1:exon
so has part: feature:891467-891627:1:exon
so has part: feature:891774-891865:1:exon
so has part: feature:892905-893103:1:exon
so has part: feature:900918-901057:1:exon
so has part: feature:901151-901469:1:exon
so has part: feature:901551-901717:1:exon
so has part: feature:903434-903609:1:exon
so has part: feature:905129-905193:1:exon
so has part: feature:905310-905461:1:exon
so has part: feature:907527-907637:1:exon
so has part: feature:909232-909286:1:exon
so has part: feature:913223-913303:1:exon
so has part: feature:913392-913934:1:exon

position:880886:1
position: 880886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880886-880904:1:exon

position:880904:1
position: 880904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:891467-891627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891774-891865:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892905-893103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:900918-901057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901151-901469:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:901551-901717:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:903434-903609:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905129-905193:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905310-905461:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:907527-907637:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:909232-909286:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:913223-913303:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913392-913934:1:exon

tdrkh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: tdrkh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tudor and KH domain-containing protein isoform X1
translation: MDVGVSKSHVFLNYSPRALLSQWSIPLPSRGVMDAVKESHRSPLSSGKMVALAAGLSVGATVGYIVYRHISSSTISPGPKPEESQMTVPVEVYRNISRHRANFLDEVSQRSGAQVRVLSDPGEQGHSSVSFLMQGTQEQVLLARCVLENLLTDCEQLSEALDVPQTAFGRIIGRGGESLKLITRTTGAKVSCSKEKTLGPGAKGTVTITGSRQEVEQAKELILEKVREDMMVRTKISQSSALRPKRGHTAVSQRPDSTEPEAPVGLSNNSPCSQPERNGLLHANGTTGEPQDTVQELDVTDNKEEEGEEEDSVSTESLSEVSKFEIPSPDLSFQPDEHLEVYVSASENPNHFWIQILGVRSLQLDKLTEEMTRFYNSGNPTDQRVETFVVGDIVAAPYHDHGTWNRARVLGMLGSGMVDLYYVDFGDNGQLPRDSLCRVRSDFLSLPFQAIECNLAGVRPKGDEWSEAALDDFEQLTYCASWSPLQAKLCSYSHSDVSSWPSVKLYDNSDGKTLDIGEELIWRGHAVSFQEAVNGKMEGSNLGCLQRMLDDVIGASSELSLSCISLSEAASISGSVDDVREEELI
SIO_010081: tdrkh
subclass of: SO_0000673
so part of: tdrkh
location: join(889598..889662,891467..891627,891774..891865,892905..893103,900918..901057,901151..901469,901551..901717,903434..903609,905129..905193,905310..905461,907527..907637,909232..909286,913223..913278)
location: region:889598-913278:1
so has part: feature:889598-889662:1:exon
so has part: feature:891467-891627:1:exon
so has part: feature:891774-891865:1:exon
so has part: feature:892905-893103:1:exon
so has part: feature:900918-901057:1:exon
so has part: feature:901151-901469:1:exon
so has part: feature:901551-901717:1:exon
so has part: feature:903434-903609:1:exon
so has part: feature:905129-905193:1:exon
so has part: feature:905310-905461:1:exon
so has part: feature:907527-907637:1:exon
so has part: feature:909232-909286:1:exon
so has part: feature:913223-913278:1:exon

XP_033931037.1
type: Protein
SIO_000068: ncbiprotein

position:889598:1
position: 889598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913278:1
position: 913278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:889598-889662:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891467-891627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891774-891865:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892905-893103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:900918-901057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901151-901469:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:901551-901717:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:903434-903609:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905129-905193:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905310-905461:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:907527-907637:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:909232-909286:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:913223-913278:1:exon

tdrkh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: tdrkh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tudor and KH domain-containing protein isoform X1
translation: MDVGVSKSHVFLNYSPRALLSQWSIPLPSRGVMDAVKESHRSPLSSGKMVALAAGLSVGATVGYIVYRHISSSTISPGPKPEESQMTVPVEVYRNISRHRANFLDEVSQRSGAQVRVLSDPGEQGHSSVSFLMQGTQEQVLLARCVLENLLTDCEQLSEALDVPQTAFGRIIGRGGESLKLITRTTGAKVSCSKEKTLGPGAKGTVTITGSRQEVEQAKELILEKVREDMMVRTKISQSSALRPKRGHTAVSQRPDSTEPEAPVGLSNNSPCSQPERNGLLHANGTTGEPQDTVQELDVTDNKEEEGEEEDSVSTESLSEVSKFEIPSPDLSFQPDEHLEVYVSASENPNHFWIQILGVRSLQLDKLTEEMTRFYNSGNPTDQRVETFVVGDIVAAPYHDHGTWNRARVLGMLGSGMVDLYYVDFGDNGQLPRDSLCRVRSDFLSLPFQAIECNLAGVRPKGDEWSEAALDDFEQLTYCASWSPLQAKLCSYSHSDVSSWPSVKLYDNSDGKTLDIGEELIWRGHAVSFQEAVNGKMEGSNLGCLQRMLDDVIGASSELSLSCISLSEAASISGSVDDVREEELI
SIO_010081: tdrkh
subclass of: SO_0000673
so part of: tdrkh
location: join(889598..889662,891467..891627,891774..891865,892905..893103,900918..901057,901151..901469,901551..901717,903434..903609,905129..905193,905310..905461,907527..907637,909232..909286,913223..913278)
location: region:889598-913278:1
so has part: feature:889598-889662:1:exon
so has part: feature:891467-891627:1:exon
so has part: feature:891774-891865:1:exon
so has part: feature:892905-893103:1:exon
so has part: feature:900918-901057:1:exon
so has part: feature:901151-901469:1:exon
so has part: feature:901551-901717:1:exon
so has part: feature:903434-903609:1:exon
so has part: feature:905129-905193:1:exon
so has part: feature:905310-905461:1:exon
so has part: feature:907527-907637:1:exon
so has part: feature:909232-909286:1:exon
so has part: feature:913223-913278:1:exon

XP_033931041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:889598-889662:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891467-891627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891774-891865:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892905-893103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:900918-901057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901151-901469:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:901551-901717:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:903434-903609:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905129-905193:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905310-905461:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:907527-907637:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:909232-909286:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:913223-913278:1:exon

tdrkh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: tdrkh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tudor and KH domain-containing protein isoform X2
translation: MDAVKESHRSPLSSGKMVALAAGLSVGATVGYIVYRHISSSTISPGPKPEESQMTVPVEVYRNISRHRANFLDEVSQRSGAQVRVLSDPGEQGHSSVSFLMQGTQEQVLLARCVLENLLTDCEQLSEALDVPQTAFGRIIGRGGESLKLITRTTGAKVSCSKEKTLGPGAKGTVTITGSRQEVEQAKELILEKVREDMMVRTKISQSSALRPKRGHTAVSQRPDSTEPEAPVGLSNNSPCSQPERNGLLHANGTTGEPQDTVQELDVTDNKEEEGEEEDSVSTESLSEVSKFEIPSPDLSFQPDEHLEVYVSASENPNHFWIQILGVRSLQLDKLTEEMTRFYNSGNPTDQRVETFVVGDIVAAPYHDHGTWNRARVLGMLGSGMVDLYYVDFGDNGQLPRDSLCRVRSDFLSLPFQAIECNLAGVRPKGDEWSEAALDDFEQLTYCASWSPLQAKLCSYSHSDVSSWPSVKLYDNSDGKTLDIGEELIWRGHAVSFQEAVNGKMEGSNLGCLQRMLDDVIGASSELSLSCISLSEAASISGSVDDVREEELI
SIO_010081: tdrkh
subclass of: SO_0000673
so part of: tdrkh
location: join(891498..891627,891774..891865,892905..893103,900918..901057,901151..901469,901551..901717,903434..903609,905129..905193,905310..905461,907527..907637,909232..909286,913223..913278)
location: region:891498-913278:1
so has part: feature:891498-891627:1:exon
so has part: feature:891774-891865:1:exon
so has part: feature:892905-893103:1:exon
so has part: feature:900918-901057:1:exon
so has part: feature:901151-901469:1:exon
so has part: feature:901551-901717:1:exon
so has part: feature:903434-903609:1:exon
so has part: feature:905129-905193:1:exon
so has part: feature:905310-905461:1:exon
so has part: feature:907527-907637:1:exon
so has part: feature:909232-909286:1:exon
so has part: feature:913223-913278:1:exon

XP_033931038.1
type: Protein
SIO_000068: ncbiprotein

position:891498:1
position: 891498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891498-891627:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891774-891865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892905-893103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:900918-901057:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:901151-901469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901551-901717:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:903434-903609:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:905129-905193:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905310-905461:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:907527-907637:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:909232-909286:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:913223-913278:1:exon

tdrkh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: tdrkh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tudor and KH domain-containing protein isoform X2
translation: MDAVKESHRSPLSSGKMVALAAGLSVGATVGYIVYRHISSSTISPGPKPEESQMTVPVEVYRNISRHRANFLDEVSQRSGAQVRVLSDPGEQGHSSVSFLMQGTQEQVLLARCVLENLLTDCEQLSEALDVPQTAFGRIIGRGGESLKLITRTTGAKVSCSKEKTLGPGAKGTVTITGSRQEVEQAKELILEKVREDMMVRTKISQSSALRPKRGHTAVSQRPDSTEPEAPVGLSNNSPCSQPERNGLLHANGTTGEPQDTVQELDVTDNKEEEGEEEDSVSTESLSEVSKFEIPSPDLSFQPDEHLEVYVSASENPNHFWIQILGVRSLQLDKLTEEMTRFYNSGNPTDQRVETFVVGDIVAAPYHDHGTWNRARVLGMLGSGMVDLYYVDFGDNGQLPRDSLCRVRSDFLSLPFQAIECNLAGVRPKGDEWSEAALDDFEQLTYCASWSPLQAKLCSYSHSDVSSWPSVKLYDNSDGKTLDIGEELIWRGHAVSFQEAVNGKMEGSNLGCLQRMLDDVIGASSELSLSCISLSEAASISGSVDDVREEELI
SIO_010081: tdrkh
subclass of: SO_0000673
so part of: tdrkh
location: join(891498..891627,891774..891865,892905..893103,900918..901057,901151..901469,901551..901717,903434..903609,905129..905193,905310..905461,907527..907637,909232..909286,913223..913278)
location: region:891498-913278:1
so has part: feature:891498-891627:1:exon
so has part: feature:891774-891865:1:exon
so has part: feature:892905-893103:1:exon
so has part: feature:900918-901057:1:exon
so has part: feature:901151-901469:1:exon
so has part: feature:901551-901717:1:exon
so has part: feature:903434-903609:1:exon
so has part: feature:905129-905193:1:exon
so has part: feature:905310-905461:1:exon
so has part: feature:907527-907637:1:exon
so has part: feature:909232-909286:1:exon
so has part: feature:913223-913278:1:exon

XP_033931040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:891498-891627:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891774-891865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892905-893103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:900918-901057:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:901151-901469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901551-901717:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:903434-903609:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:905129-905193:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905310-905461:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:907527-907637:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:909232-909286:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:913223-913278:1:exon

mbtd1
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: mbtd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 914865..935487
location: region:914865-935487:1
so has part: feature:914865-935487:1:exon
subclass of: SO_0000010

117468352
type: Gene
SIO_000068: ncbigene

position:914865:1
position: 914865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935487:1
position: 935487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914865-935487:1:exon

mbtd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: mbtd1
product: mbt domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_034112413.1
SIO_010081: mbtd1
subclass of: SO_0000673
so part of: mbtd1
location: join(914865..915019,915462..915543,916050..916254,916402..916535,916623..916737,916822..916904,916988..917105,918489..918623,918708..918796,918983..919217,919838..919893,920051..920155,920240..920387,921076..921158,921659..921893,922787..922858,924028..924189,930571..935487)
location: region:914865-935487:1
so has part: feature:914865-915019:1:exon
so has part: feature:915462-915543:1:exon
so has part: feature:916050-916254:1:exon
so has part: feature:916402-916535:1:exon
so has part: feature:916623-916737:1:exon
so has part: feature:916822-916904:1:exon
so has part: feature:916988-917105:1:exon
so has part: feature:918489-918623:1:exon
so has part: feature:918708-918796:1:exon
so has part: feature:918983-919217:1:exon
so has part: feature:919838-919893:1:exon
so has part: feature:920051-920155:1:exon
so has part: feature:920240-920387:1:exon
so has part: feature:921076-921158:1:exon
so has part: feature:921659-921893:1:exon
so has part: feature:922787-922858:1:exon
so has part: feature:924028-924189:1:exon
so has part: feature:930571-935487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:914865-915019:1:exon

position:915019:1
position: 915019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:915462-915543:1:exon

position:915462:1
position: 915462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915543:1
position: 915543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:916050-916254:1:exon

position:916050:1
position: 916050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916254:1
position: 916254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:916402-916535:1:exon

position:916402:1
position: 916402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916535:1
position: 916535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:916623-916737:1:exon

position:916623:1
position: 916623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916737:1
position: 916737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:916822-916904:1:exon

position:916822:1
position: 916822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916904:1
position: 916904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:916988-917105:1:exon

position:916988:1
position: 916988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917105:1
position: 917105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:918489-918623:1:exon

position:918489:1
position: 918489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918623:1
position: 918623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:918708-918796:1:exon

position:918708:1
position: 918708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918796:1
position: 918796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:918983-919217:1:exon

position:918983:1
position: 918983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919217:1
position: 919217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:919838-919893:1:exon

position:919838:1
position: 919838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919893:1
position: 919893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:920051-920155:1:exon

position:920051:1
position: 920051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920155:1
position: 920155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:920240-920387:1:exon

position:920240:1
position: 920240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920387:1
position: 920387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:921076-921158:1:exon

position:921076:1
position: 921076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921158:1
position: 921158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:921659-921893:1:exon

position:921659:1
position: 921659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921893:1
position: 921893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:922787-922858:1:exon

position:922787:1
position: 922787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922858:1
position: 922858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:924028-924189:1:exon

position:924028:1
position: 924028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924189:1
position: 924189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:930571-935487:1:exon

position:930571:1
position: 930571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mbtd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: mbtd1
product: mbt domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_034112412.1
SIO_010081: mbtd1
subclass of: SO_0000673
so part of: mbtd1
location: join(914865..915019,916050..916254,916402..916535,916623..916737,916822..916904,916988..917105,918489..918623,918708..918796,918983..919217,919838..919893,920051..920155,920240..920387,921076..921158,921659..921893,922787..922858,924028..924189,930571..935487)
location: region:914865-935487:1
so has part: feature:914865-915019:1:exon
so has part: feature:916050-916254:1:exon
so has part: feature:916402-916535:1:exon
so has part: feature:916623-916737:1:exon
so has part: feature:916822-916904:1:exon
so has part: feature:916988-917105:1:exon
so has part: feature:918489-918623:1:exon
so has part: feature:918708-918796:1:exon
so has part: feature:918983-919217:1:exon
so has part: feature:919838-919893:1:exon
so has part: feature:920051-920155:1:exon
so has part: feature:920240-920387:1:exon
so has part: feature:921076-921158:1:exon
so has part: feature:921659-921893:1:exon
so has part: feature:922787-922858:1:exon
so has part: feature:924028-924189:1:exon
so has part: feature:930571-935487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:914865-915019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:916050-916254:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916402-916535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:916623-916737:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:916822-916904:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916988-917105:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:918489-918623:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:918708-918796:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:918983-919217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:919838-919893:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920051-920155:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:920240-920387:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:921076-921158:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:921659-921893:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922787-922858:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:924028-924189:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:930571-935487:1:exon

mbtd1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 52239
gene: mbtd1
product: mbt domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004554473.1
SIO_010081: mbtd1
so part of: mbtd1
location: join(914865..915019,916050..916254,916402..916535,916623..916737,916822..916904,916988..917105,918489..918623,918708..918796,918983..919217,919838..919893,920051..920155,920240..920387,921076..921158,921659..921893,922787..922858,924028..924189,930571..931079,933965..935487)
location: region:914865-935487:1
so has part: feature:914865-915019:1:exon
so has part: feature:916050-916254:1:exon
so has part: feature:916402-916535:1:exon
so has part: feature:916623-916737:1:exon
so has part: feature:916822-916904:1:exon
so has part: feature:916988-917105:1:exon
so has part: feature:918489-918623:1:exon
so has part: feature:918708-918796:1:exon
so has part: feature:918983-919217:1:exon
so has part: feature:919838-919893:1:exon
so has part: feature:920051-920155:1:exon
so has part: feature:920240-920387:1:exon
so has part: feature:921076-921158:1:exon
so has part: feature:921659-921893:1:exon
so has part: feature:922787-922858:1:exon
so has part: feature:924028-924189:1:exon
so has part: feature:930571-931079:1:exon
so has part: feature:933965-935487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:914865-915019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:916050-916254:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916402-916535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:916623-916737:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:916822-916904:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916988-917105:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:918489-918623:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:918708-918796:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:918983-919217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:919838-919893:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920051-920155:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:920240-920387:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:921076-921158:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:921659-921893:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922787-922858:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:924028-924189:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:930571-931079:1:exon

position:931079:1
position: 931079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:933965-935487:1:exon

position:933965:1
position: 933965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mbtd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: mbtd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MBT domain-containing protein 1 isoform X1
translation: MEDTRDLAERTPRSERKRRDSFGMFDGYDSCSEESTSSSSSEDSEDEVMPSIPASLPIIKNNGQVYTYPDGKAGMATCEMCGMVGVRDAFYSKTKRFCSVSCSRSYSSNSKKASILARLQGKPPTKKAKVLQKQPLMAKLAAYAQYQASQQNQAKSKAVVPAESFDWGRYICSNDTVGAPVSCFKHAPMGTCWGGIEEGVRLEVPNSDTNLSTKVYWIAEIIKLAGFKALLRYEGFDSDTSKDYWCDLCVPEVHPVGWCASSGKPLIPPKTIQHKYSNWKAVLVKRLTGAKTLPPDFNTKVQENLQFPFKKLMRVEVVDKNYLCRTRVALVEQVIGGRLRLVYEESQDGSDDFWCHMYSPLIHNIGWSRSIGHRFKRSDFTKKMEGQVDAPALHFQKVKDVDQSGDWFKDGMKIEAIDPLNLSAICVATVRKVLADGYLMIGIDGSEAVDGSDWFCYHGTSPSIYPVGFCEINNIELTPSRGYTKLPFKWFDYLRETGSIAAPVKLFTKEIPNHGFRQGMKLEAVDLMEPRLVCVATVTRIVHRLLRIHFDGWEDEYDQWVDCESPDLYPVGWCQLTGYQLQPPASQSTRDLPQSVPKQKKKAQQYKGQKKKRKIPVGRRPFSQTGRRRSSFSGDEEQSPPPYPAQGPSRPRPRPRTHLHQTHKSEPLLRMKVDPAEVDEFTFSQGTSDQESNGSGSYYIKQEP
SIO_010081: mbtd1
subclass of: SO_0000673
so part of: mbtd1
location: join(914999..915019,916050..916254,916402..916535,916623..916737,916822..916904,916988..917105,918489..918623,918708..918796,918983..919217,919838..919893,920051..920155,920240..920387,921076..921158,921659..921893,922787..922858,924028..924189,930571..930689)
location: region:914999-930689:1
so has part: feature:914999-915019:1:exon
so has part: feature:916050-916254:1:exon
so has part: feature:916402-916535:1:exon
so has part: feature:916623-916737:1:exon
so has part: feature:916822-916904:1:exon
so has part: feature:916988-917105:1:exon
so has part: feature:918489-918623:1:exon
so has part: feature:918708-918796:1:exon
so has part: feature:918983-919217:1:exon
so has part: feature:919838-919893:1:exon
so has part: feature:920051-920155:1:exon
so has part: feature:920240-920387:1:exon
so has part: feature:921076-921158:1:exon
so has part: feature:921659-921893:1:exon
so has part: feature:922787-922858:1:exon
so has part: feature:924028-924189:1:exon
so has part: feature:930571-930689:1:exon

XP_033968303.1
type: Protein
SIO_000068: ncbiprotein

position:914999:1
position: 914999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930689:1
position: 930689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914999-915019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:916050-916254:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916402-916535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:916623-916737:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:916822-916904:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916988-917105:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:918489-918623:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:918708-918796:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:918983-919217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:919838-919893:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920051-920155:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:920240-920387:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:921076-921158:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:921659-921893:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922787-922858:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:924028-924189:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:930571-930689:1:exon

mbtd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: mbtd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MBT domain-containing protein 1 isoform X2
translation: MFDGYDSCSEESTSSSSSEDSEDEVMPSIPASLPIIKNNGQVYTYPDGKAGMATCEMCGMVGVRDAFYSKTKRFCSVSCSRSYSSNSKKASILARLQGKPPTKKAKVLQKQPLMAKLAAYAQYQASQQNQAKSKAVVPAESFDWGRYICSNDTVGAPVSCFKHAPMGTCWGGIEEGVRLEVPNSDTNLSTKVYWIAEIIKLAGFKALLRYEGFDSDTSKDYWCDLCVPEVHPVGWCASSGKPLIPPKTIQHKYSNWKAVLVKRLTGAKTLPPDFNTKVQENLQFPFKKLMRVEVVDKNYLCRTRVALVEQVIGGRLRLVYEESQDGSDDFWCHMYSPLIHNIGWSRSIGHRFKRSDFTKKMEGQVDAPALHFQKVKDVDQSGDWFKDGMKIEAIDPLNLSAICVATVRKVLADGYLMIGIDGSEAVDGSDWFCYHGTSPSIYPVGFCEINNIELTPSRGYTKLPFKWFDYLRETGSIAAPVKLFTKEIPNHGFRQGMKLEAVDLMEPRLVCVATVTRIVHRLLRIHFDGWEDEYDQWVDCESPDLYPVGWCQLTGYQLQPPASQSTRDLPQSVPKQKKKAQQYKGQKKKRKIPVGRRPFSQTGRRRSSFSGDEEQSPPPYPAQGPSRPRPRPRTHLHQTHKSEPLLRMKVDPAEVDEFTFSQGTSDQESNGSGSYYIKQEP
SIO_010081: mbtd1
subclass of: SO_0000673
so part of: mbtd1
location: join(916098..916254,916402..916535,916623..916737,916822..916904,916988..917105,918489..918623,918708..918796,918983..919217,919838..919893,920051..920155,920240..920387,921076..921158,921659..921893,922787..922858,924028..924189,930571..930689)
location: region:916098-930689:1
so has part: feature:916098-916254:1:exon
so has part: feature:916402-916535:1:exon
so has part: feature:916623-916737:1:exon
so has part: feature:916822-916904:1:exon
so has part: feature:916988-917105:1:exon
so has part: feature:918489-918623:1:exon
so has part: feature:918708-918796:1:exon
so has part: feature:918983-919217:1:exon
so has part: feature:919838-919893:1:exon
so has part: feature:920051-920155:1:exon
so has part: feature:920240-920387:1:exon
so has part: feature:921076-921158:1:exon
so has part: feature:921659-921893:1:exon
so has part: feature:922787-922858:1:exon
so has part: feature:924028-924189:1:exon
so has part: feature:930571-930689:1:exon

XP_033968304.1
type: Protein
SIO_000068: ncbiprotein

position:916098:1
position: 916098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:916098-916254:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:916402-916535:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916623-916737:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:916822-916904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:916988-917105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:918489-918623:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:918708-918796:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:918983-919217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:919838-919893:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:920051-920155:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920240-920387:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:921076-921158:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:921659-921893:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:922787-922858:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:924028-924189:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:930571-930689:1:exon

LOC117439384
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439384
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(960964..968426)
location: region:960964-968426:-1
so has part: feature:960964-968426:-1:exon
subclass of: SO_0000010

117439384
type: Gene
SIO_000068: ncbigene

position:960964:-1
position: 960964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968426:-1
position: 968426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:960964-968426:-1:exon

LOC117439384
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439384
product: nucleoside diphosphate kinase A2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_034075297.1
SIO_010081: LOC117439384
subclass of: SO_0000673
so part of: LOC117439384
location: complement(join(960964..961264,961616..961728,961819..961920,966835..966967,968323..968426))
location: region:960964-968426:-1
so has part: feature:968323-968426:-1:exon
so has part: feature:966835-966967:-1:exon
so has part: feature:961819-961920:-1:exon
so has part: feature:961616-961728:-1:exon
so has part: feature:960964-961264:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:968323-968426:-1:exon

position:968323:-1
position: 968323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:966835-966967:-1:exon

position:966835:-1
position: 966835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966967:-1
position: 966967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:961819-961920:-1:exon

position:961819:-1
position: 961819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961920:-1
position: 961920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:961616-961728:-1:exon

position:961616:-1
position: 961616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961728:-1
position: 961728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:960964-961264:-1:exon

position:961264:-1
position: 961264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439384
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439384
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoside diphosphate kinase A2-like
translation: MAEQKERTFIAIKPDGVQRGIIGEVIKRFETKGFKLVGMKMLHAPQDLLEQHYIDLKERPFFPTLMKYMTSGPVVAMVWEGKGAVKTGRVMLGETNPADSKPGTIRGDFCIDVSKNIIHGSDSVDSANTEIALWFKEGDLCSYSSCAASWLY
SIO_010081: LOC117439384
subclass of: SO_0000673
so part of: LOC117439384
location: complement(join(961150..961264,961616..961728,961819..961920,966835..966963))
location: region:961150-966963:-1
so has part: feature:966835-966963:-1:exon
so has part: feature:961819-961920:-1:exon
so has part: feature:961616-961728:-1:exon
so has part: feature:961150-961264:-1:exon

XP_033931188.1
type: Protein
SIO_000068: ncbiprotein

position:961150:-1
position: 961150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966963:-1
position: 966963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:966835-966963:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961819-961920:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:961616-961728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:961150-961264:-1:exon

LOC117439320
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(984597..987062)
location: region:984597-987062:-1
so has part: feature:984597-987062:-1:exon
subclass of: SO_0000011

117439320
type: Gene
SIO_000068: ncbigene

position:984597:-1
position: 984597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987062:-1
position: 987062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:984597-987062:-1:exon

LOC117439320
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117439320
product: uncharacterized LOC117439320
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004551145.1
SIO_010081: LOC117439320
subclass of: SO_0000673
so part of: LOC117439320
location: complement(join(984597..985128,986893..987062))
location: region:984597-987062:-1
so has part: feature:986893-987062:-1:exon
so has part: feature:984597-985128:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:986893-987062:-1:exon

position:986893:-1
position: 986893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:984597-985128:-1:exon

position:985128:-1
position: 985128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439322
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439322
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1112156..1551483)
location: region:1112156-1551483:-1
so has part: feature:1112156-1551483:-1:exon
subclass of: SO_0000010

117439322
type: Gene
SIO_000068: ncbigene

position:1112156:-1
position: 1112156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1551483:-1
position: 1551483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112156-1551483:-1:exon

LOC117439322
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439322
product: carbonic anhydrase-related protein 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034075221.1
SIO_010081: LOC117439322
subclass of: SO_0000673
so part of: LOC117439322
location: complement(join(1112156..1112582,1115623..1115797,1116383..1116537,1125149..1125221,1150302..1150397,1159308..1159493,1383165..1383307,1517444..1517518,1550959..1551483))
location: region:1112156-1551483:-1
so has part: feature:1550959-1551483:-1:exon
so has part: feature:1517444-1517518:-1:exon
so has part: feature:1383165-1383307:-1:exon
so has part: feature:1159308-1159493:-1:exon
so has part: feature:1150302-1150397:-1:exon
so has part: feature:1125149-1125221:-1:exon
so has part: feature:1116383-1116537:-1:exon
so has part: feature:1115623-1115797:-1:exon
so has part: feature:1112156-1112582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1550959-1551483:-1:exon

position:1550959:-1
position: 1550959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1517444-1517518:-1:exon

position:1517444:-1
position: 1517444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1517518:-1
position: 1517518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1383165-1383307:-1:exon

position:1383165:-1
position: 1383165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383307:-1
position: 1383307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1159308-1159493:-1:exon

position:1159308:-1
position: 1159308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159493:-1
position: 1159493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1150302-1150397:-1:exon

position:1150302:-1
position: 1150302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150397:-1
position: 1150397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1125149-1125221:-1:exon

position:1125149:-1
position: 1125149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125221:-1
position: 1125221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1116383-1116537:-1:exon

position:1116383:-1
position: 1116383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116537:-1
position: 1116537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1115623-1115797:-1:exon

position:1115623:-1
position: 1115623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1115797:-1
position: 1115797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1112156-1112582:-1:exon

position:1112582:-1
position: 1112582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439322
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439322
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase-related protein 10
translation: MDIIWEILIILQANVIVCISAQPNAPKIHDGWWAYKEVVQGSFVPVPSFWGLVNSAWNLCSQGKRQSPVNIKTGHMIFDPFLTPIKLNTGARKVGGTMYNTGRHVSLRLDKEHLVNISGGPMTYSHRLEEIRLHFGSEDGQGSEHLLNGQGFSGEVQLIHYNHELYTNYTEAAKSPNGLVIVSIFMKIAETSNSFLNRMLNRDTITRITYKNDAYLLTSLNIEEIYPETSSFITYDGSMTTPPCFETVTWLLINKPVYLTRMQMHSLRLLSQNQPSQIFLSMSDNVRPVQELNNRCIRTNINFSMQGKDCPNNRAQKLQYRVNEWLLK
SIO_010081: LOC117439322
subclass of: SO_0000673
so part of: LOC117439322
location: complement(join(1112560..1112582,1115623..1115797,1116383..1116537,1125149..1125221,1150302..1150397,1159308..1159493,1383165..1383307,1517444..1517518,1550959..1551019))
location: region:1112560-1551019:-1
so has part: feature:1550959-1551019:-1:exon
so has part: feature:1517444-1517518:-1:exon
so has part: feature:1383165-1383307:-1:exon
so has part: feature:1159308-1159493:-1:exon
so has part: feature:1150302-1150397:-1:exon
so has part: feature:1125149-1125221:-1:exon
so has part: feature:1116383-1116537:-1:exon
so has part: feature:1115623-1115797:-1:exon
so has part: feature:1112560-1112582:-1:exon

XP_033931112.1
type: Protein
SIO_000068: ncbiprotein

position:1112560:-1
position: 1112560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1551019:-1
position: 1551019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1550959-1551019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1517444-1517518:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383165-1383307:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1159308-1159493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1150302-1150397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1125149-1125221:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1116383-1116537:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1115623-1115797:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1112560-1112582:-1:exon

LOC117439323
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1193650..1194198)
location: region:1193650-1194198:-1
so has part: feature:1193650-1194198:-1:exon
subclass of: SO_0000011

117439323
type: Gene
SIO_000068: ncbigene

position:1193650:-1
position: 1193650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1194198:-1
position: 1194198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1193650-1194198:-1:exon

LOC117439323
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117439323
product: uncharacterized LOC117439323, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004551146.1
SIO_010081: LOC117439323
subclass of: SO_0000673
so part of: LOC117439323
location: complement(join(1193650..1193736,1193894..1193957,1194172..1194198))
location: region:1193650-1194198:-1
so has part: feature:1194172-1194198:-1:exon
so has part: feature:1193894-1193957:-1:exon
so has part: feature:1193650-1193736:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1194172-1194198:-1:exon

position:1194172:-1
position: 1194172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1193894-1193957:-1:exon

position:1193894:-1
position: 1193894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193957:-1
position: 1193957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1193650-1193736:-1:exon

position:1193736:-1
position: 1193736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439323
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117439323
product: uncharacterized LOC117439323, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004551147.1
SIO_010081: LOC117439323
subclass of: SO_0000673
so part of: LOC117439323
location: complement(join(1193713..1193957,1194172..1194198))
location: region:1193713-1194198:-1
so has part: feature:1194172-1194198:-1:exon
so has part: feature:1193713-1193957:-1:exon

position:1193713:-1
position: 1193713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194172-1194198:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1193713-1193957:-1:exon

LOC117468366
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117468366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1655148..1655737)
location: region:1655148-1655737:-1
so has part: feature:1655148-1655737:-1:exon
subclass of: SO_0000011

117468366
type: Gene
SIO_000068: ncbigene

position:1655148:-1
position: 1655148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1655737:-1
position: 1655737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1655148-1655737:-1:exon

LOC117468366
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117468366
product: uncharacterized LOC117468366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004554474.1
SIO_010081: LOC117468366
subclass of: SO_0000673
so part of: LOC117468366
location: complement(join(1655148..1655184,1655356..1655438,1655658..1655737))
location: region:1655148-1655737:-1
so has part: feature:1655658-1655737:-1:exon
so has part: feature:1655356-1655438:-1:exon
so has part: feature:1655148-1655184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1655658-1655737:-1:exon

position:1655658:-1
position: 1655658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1655356-1655438:-1:exon

position:1655356:-1
position: 1655356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1655438:-1
position: 1655438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1655148-1655184:-1:exon

position:1655184:-1
position: 1655184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439358
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439358
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1705778..1722142)
location: region:1705778-1722142:-1
so has part: feature:1705778-1722142:-1:exon
subclass of: SO_0000010

117439358
type: Gene
SIO_000068: ncbigene

position:1705778:-1
position: 1705778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1722142:-1
position: 1722142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1705778-1722142:-1:exon

LOC117439358
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439358
product: uncharacterized LOC117439358
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034075270.1
SIO_010081: LOC117439358
subclass of: SO_0000673
so part of: LOC117439358
location: complement(join(1705778..1706086,1706750..1706839,1708387..1708485,1708582..1708770,1709250..1709350,1722089..1722142))
location: region:1705778-1722142:-1
so has part: feature:1722089-1722142:-1:exon
so has part: feature:1709250-1709350:-1:exon
so has part: feature:1708582-1708770:-1:exon
so has part: feature:1708387-1708485:-1:exon
so has part: feature:1706750-1706839:-1:exon
so has part: feature:1705778-1706086:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1722089-1722142:-1:exon

position:1722089:-1
position: 1722089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1709250-1709350:-1:exon

position:1709250:-1
position: 1709250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1709350:-1
position: 1709350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1708582-1708770:-1:exon

position:1708582:-1
position: 1708582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1708770:-1
position: 1708770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1708387-1708485:-1:exon

position:1708387:-1
position: 1708387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1708485:-1
position: 1708485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1706750-1706839:-1:exon

position:1706750:-1
position: 1706750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1706839:-1
position: 1706839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1705778-1706086:-1:exon

position:1706086:-1
position: 1706086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439358
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439358
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117439358
translation: MWQCKVCAVAVSCRSQLLKHYREKHTIHGTNRRHEAIGCDPMISDFTMRWPALFDVTEINAEFKRITTIPLQSKFLSQLDLYRDGVVTKKKDDIDAGRDLLIKGLCLYLNEDPGDVVQEFIDVDETIVEGAIEKTTMGIFTLKTTASEDDVRIVLEGVTVIQDLETVAFASAMLLGLIYSLNLSYPKKLSCTFEVLQKIIMESDGGVLSYKAQSLKTKLHQCE
SIO_010081: LOC117439358
subclass of: SO_0000673
so part of: LOC117439358
location: complement(join(1705778..1706086,1706750..1706839,1708387..1708485,1708582..1708755))
location: region:1705778-1708755:-1
so has part: feature:1708582-1708755:-1:exon
so has part: feature:1708387-1708485:-1:exon
so has part: feature:1706750-1706839:-1:exon
so has part: feature:1705778-1706086:-1:exon

XP_033931161.1
type: Protein
SIO_000068: ncbiprotein

position:1708755:-1
position: 1708755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1708582-1708755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1708387-1708485:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1706750-1706839:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1705778-1706086:-1:exon

LOC117439359
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439359
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2003113..2006293)
location: region:2003113-2006293:-1
so has part: feature:2003113-2006293:-1:exon
subclass of: SO_0000010

117439359
type: Gene
SIO_000068: ncbigene

position:2003113:-1
position: 2003113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2006293:-1
position: 2006293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2003113-2006293:-1:exon

LOC117439359
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439359
product: uncharacterized LOC117439359
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034075271.1
SIO_010081: LOC117439359
subclass of: SO_0000673
so part of: LOC117439359
location: complement(join(2003113..2004926,2005034..2006293))
location: region:2003113-2006293:-1
so has part: feature:2005034-2006293:-1:exon
so has part: feature:2003113-2004926:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2005034-2006293:-1:exon

position:2005034:-1
position: 2005034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2003113-2004926:-1:exon

position:2004926:-1
position: 2004926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439359
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439359
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: uncharacterized protein LOC117439359
translation: MSNTDSSENEPFSKDLDPGSDVPPDAASNSSSLRRMSARLASRDSSQSAEANFIITHLRQQGISAASDLPLSQLRELSDQVSGAVHQPRAAAPAAPANSPAITPERPERGRGRSRGGKRKKKSSPSRAGPSKRSTFPQAHPSVAQPGSPGNQPLTDSIANSLQSLASSMLLIDARLQAMDKGPIGASTSSANWASVPASLPTGFMPGLGGFPPQIIAPPHSLASALPAPHSGRPHIPQSAHISSRLRAKILEGKDINLVTLILPSPECDKSIATGGSITAVFKSADPRLLRDLNIGQFLVAFGIFRDVLCSVYPERRVELDAYLGLIGDLYLKFGKSTFYSYHKSFSSKAALHLAHCNVRLDWSVLDTELLVMATGGQQVVSCISCGTQGHTSPFCPSVPFSGFRAFPASQSGNNKQKNQYLQGGSPEVSLPQARAREVPAAETTWGKKLLKHHLSTPINIPHLAAALSTHPDPVFVEYLLSGLSQGFRVGVISPPSVSLVSKNLQSAFKEPTIVSQLIEKELNKGYLIGPFHSPPFSVFRTSPIGIATSKYSEKKRLIFDLSAPRSGPFCSINSLIPPEPFSLHYASVDNAIKLIKFAGQGAWLSKADITDAFKIIPIHPSQWNMFGIKWEAKFYFAVXLTFGCRSSPCIFNSFSEALCWILLNNVRIPSVLHLLDDFLLIDPPRDNSGASLAKLKCCFQELGVPLSGEKTIGPDTSLEFLGITLDTIDMKASLPIAKLQRIRDITKSYCEQQVITKQQLLSLLGHLNFAMRVIPQGRSFISRLLDAASAVTNLHDRVFLDEGCRSDLCFWSLLLAHWNGITFFYDDLVYSSDSMRFFTDAAPSVGFGGFFQGEWFAGPWPPSFPNHASSSALHEIYPIAVACHVWGHLWLRKRISVLCDNQSVVWIINKGRSSCSDIMPFMRSITWSSLTHNFLISARHVPGHLNIVADSLSRFQFQTFRNLCPEASPQPVGIPPLHLLSLH
SIO_010081: LOC117439359
subclass of: SO_0000673
so part of: LOC117439359
location: complement(join(2003233..2004926,2005034..2006293))
location: region:2003233-2006293:-1
so has part: feature:2005034-2006293:-1:exon
so has part: feature:2003233-2004926:-1:exon

XP_033931162.1
type: Protein
SIO_000068: ncbiprotein

position:2003233:-1
position: 2003233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2005034-2006293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2003233-2004926:-1:exon

LOC117439360
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439360
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <2314299..2333097
location: region:2314299-2333097:1
so has part: feature:2314299-2333097:1:exon
subclass of: SO_0000010

117439360
type: Gene
SIO_000068: ncbigene

position:2314299:1
position: 2314299
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2333097:1
position: 2333097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2314299-2333097:1:exon

LOC117439360
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439360
product: uncharacterized LOC117439360
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 21% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034075272.1
SIO_010081: LOC117439360
subclass of: SO_0000673
so part of: LOC117439360
location: join(<2314299..2314342,2315343..2315434,2315643..2316019,2316379..2316448,2318171..2318333,2318758..2318905,2333080..2333097)
location: region:2314299-2333097:1
so has part: feature:2314299-2314342:1:exon
so has part: feature:2315343-2315434:1:exon
so has part: feature:2315643-2316019:1:exon
so has part: feature:2316379-2316448:1:exon
so has part: feature:2318171-2318333:1:exon
so has part: feature:2318758-2318905:1:exon
so has part: feature:2333080-2333097:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2314299-2314342:1:exon

position:2314342:1
position: 2314342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2315343-2315434:1:exon

position:2315343:1
position: 2315343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2315434:1
position: 2315434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2315643-2316019:1:exon

position:2315643:1
position: 2315643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2316019:1
position: 2316019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2316379-2316448:1:exon

position:2316379:1
position: 2316379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2316448:1
position: 2316448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2318171-2318333:1:exon

position:2318171:1
position: 2318171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2318333:1
position: 2318333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2318758-2318905:1:exon

position:2318758:1
position: 2318758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2318905:1
position: 2318905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2333080-2333097:1:exon

position:2333080:1
position: 2333080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117439360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439360
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117439360
translation: DRPKQLTGTVESRYGCVRWCPADLPEGETKATLEDLKRDLRNIYSEEGMGGAERAEPLMVWTYVILRRYLNRMPAPAMLEVKEEWPFLFSQRGLFSHFGLLTDVNILQKLQEALGQRGQIIQHFCQKLDNPKIREVLASYDPEGLEKAACILQLLMVYFKEPTEKLMLEVDTCATAADVVNTAALPSTPCLIIQGDTMKPSGWMLSTKGQVVMGPHPFFLHGVAALFGSYYVFNLKYPIGSCTLEFIQRCFLGINPEKGSKAKKQSSINPHVSTLHRKLIDLEWSAWCAGTSPVGSITCDQCL
SIO_010081: LOC117439360
subclass of: SO_0000673
so part of: LOC117439360
location: join(<2314299..2314342,2315343..2315434,2315643..2316019,2316379..2316448,2318171..2318333,2318758..2318905,2333080..2333097)
location: region:2314299-2333097:1
so has part: feature:2314299-2314342:1:exon
so has part: feature:2315343-2315434:1:exon
so has part: feature:2315643-2316019:1:exon
so has part: feature:2316379-2316448:1:exon
so has part: feature:2318171-2318333:1:exon
so has part: feature:2318758-2318905:1:exon
so has part: feature:2333080-2333097:1:exon

XP_033931163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2314299-2314342:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2315343-2315434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2315643-2316019:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2316379-2316448:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2318171-2318333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2318758-2318905:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2333080-2333097:1:exon

LOC117439307
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439307
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2400960..2403021
location: region:2400960-2403021:1
so has part: feature:2400960-2403021:1:exon
subclass of: SO_0000010

117439307
type: Gene
SIO_000068: ncbigene

position:2400960:1
position: 2400960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2403021:1
position: 2403021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2400960-2403021:1:exon

LOC117439307
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439307
product: uncharacterized LOC117439307
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034075196.1
SIO_010081: LOC117439307
subclass of: SO_0000673
so part of: LOC117439307
location: join(2400960..2401295,2401661..2403021)
location: region:2400960-2403021:1
so has part: feature:2400960-2401295:1:exon
so has part: feature:2401661-2403021:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2400960-2401295:1:exon

position:2401295:1
position: 2401295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2401661-2403021:1:exon

position:2401661:1
position: 2401661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117439307
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439307
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117439307
translation: MVKAASLNEWTMLQCFGHRLHLAVENAVKKDGRINRTAGVCKKLVGHFSQLEAQKELNLPSHFLITECQTRWGSRQMMISRILEQQKALSQVLSVDKKLRHLIPNWQDIDVLESVSKSLGPLLEFTDALSGEDYVSVSYVKPVLHLFNSSMLLMREEDTDLSKKLKKEMRDYLNEKYEDEDTQKLLDMASCLDPRFKMDFIAADSKPQVKARVTSDMPGDCSCKLQH
SIO_010081: LOC117439307
subclass of: SO_0000673
so part of: LOC117439307
location: join(2401223..2401295,2401661..2402271)
location: region:2401223-2402271:1
so has part: feature:2401223-2401295:1:exon
so has part: feature:2401661-2402271:1:exon

XP_033931087.1
type: Protein
SIO_000068: ncbiprotein

position:2401223:1
position: 2401223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2402271:1
position: 2402271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2401223-2401295:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2401661-2402271:1:exon

LOC117439033
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2496438..2577044)
location: region:2496438-2577044:-1
so has part: feature:2496438-2577044:-1:exon
subclass of: SO_0000010

117439033
type: Gene
SIO_000068: ncbigene

position:2496438:-1
position: 2496438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2577044:-1
position: 2577044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2496438-2577044:-1:exon

LOC117439033
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439033
product: growth arrest-specific protein 7-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034074727.1
SIO_010081: LOC117439033
subclass of: SO_0000673
so part of: LOC117439033
location: complement(join(2496438..2497463,2498650..2498748,2499543..2499622,2501054..2501177,2501482..2501610,2504535..2504613,2508167..2508241,2508431..2508546,2513090..2513179,2576773..2577044))
location: region:2496438-2577044:-1
so has part: feature:2576773-2577044:-1:exon
so has part: feature:2513090-2513179:-1:exon
so has part: feature:2508431-2508546:-1:exon
so has part: feature:2508167-2508241:-1:exon
so has part: feature:2504535-2504613:-1:exon
so has part: feature:2501482-2501610:-1:exon
so has part: feature:2501054-2501177:-1:exon
so has part: feature:2499543-2499622:-1:exon
so has part: feature:2498650-2498748:-1:exon
so has part: feature:2496438-2497463:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2576773-2577044:-1:exon

position:2576773:-1
position: 2576773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2513090-2513179:-1:exon

position:2513090:-1
position: 2513090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2513179:-1
position: 2513179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2508431-2508546:-1:exon

position:2508431:-1
position: 2508431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2508546:-1
position: 2508546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2508167-2508241:-1:exon

position:2508167:-1
position: 2508167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2508241:-1
position: 2508241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2504535-2504613:-1:exon

position:2504535:-1
position: 2504535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2504613:-1
position: 2504613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2501482-2501610:-1:exon

position:2501482:-1
position: 2501482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2501610:-1
position: 2501610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2501054-2501177:-1:exon

position:2501054:-1
position: 2501054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2501177:-1
position: 2501177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2499543-2499622:-1:exon

position:2499543:-1
position: 2499543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2499622:-1
position: 2499622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2498650-2498748:-1:exon

position:2498650:-1
position: 2498650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2498748:-1
position: 2498748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2496438-2497463:-1:exon

position:2497463:-1
position: 2497463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439033
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439033
product: growth arrest-specific protein 7-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034074725.1
SIO_010081: LOC117439033
subclass of: SO_0000673
so part of: LOC117439033
location: complement(join(2496438..2497463,2498650..2498748,2499543..2499622,2501054..2501177,2501482..2501610,2504535..2504613,2508167..2508241,2508431..2508546,2513090..2513179,2548466..2548519,2576773..2577044))
location: region:2496438-2577044:-1
so has part: feature:2576773-2577044:-1:exon
so has part: feature:2548466-2548519:-1:exon
so has part: feature:2513090-2513179:-1:exon
so has part: feature:2508431-2508546:-1:exon
so has part: feature:2508167-2508241:-1:exon
so has part: feature:2504535-2504613:-1:exon
so has part: feature:2501482-2501610:-1:exon
so has part: feature:2501054-2501177:-1:exon
so has part: feature:2499543-2499622:-1:exon
so has part: feature:2498650-2498748:-1:exon
so has part: feature:2496438-2497463:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2576773-2577044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2548466-2548519:-1:exon

position:2548466:-1
position: 2548466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2548519:-1
position: 2548519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2513090-2513179:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2508431-2508546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2508167-2508241:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2504535-2504613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2501482-2501610:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2501054-2501177:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2499543-2499622:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2498650-2498748:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2496438-2497463:-1:exon

LOC117439033
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439033
product: growth arrest-specific protein 7-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034074724.1
SIO_010081: LOC117439033
subclass of: SO_0000673
so part of: LOC117439033
location: complement(join(2496438..2497463,2498650..2498748,2499543..2499622,2501054..2501177,2501482..2501610,2504535..2504613,2508167..2508241,2508431..2508546,2513090..2513179,2548466..2548548,2567328..2567445,2576773..2577044))
location: region:2496438-2577044:-1
so has part: feature:2576773-2577044:-1:exon
so has part: feature:2567328-2567445:-1:exon
so has part: feature:2548466-2548548:-1:exon
so has part: feature:2513090-2513179:-1:exon
so has part: feature:2508431-2508546:-1:exon
so has part: feature:2508167-2508241:-1:exon
so has part: feature:2504535-2504613:-1:exon
so has part: feature:2501482-2501610:-1:exon
so has part: feature:2501054-2501177:-1:exon
so has part: feature:2499543-2499622:-1:exon
so has part: feature:2498650-2498748:-1:exon
so has part: feature:2496438-2497463:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2576773-2577044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2567328-2567445:-1:exon

position:2567328:-1
position: 2567328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2567445:-1
position: 2567445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2548466-2548548:-1:exon

position:2548548:-1
position: 2548548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2513090-2513179:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2508431-2508546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2508167-2508241:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2504535-2504613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2501482-2501610:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2501054-2501177:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2499543-2499622:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2498650-2498748:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2496438-2497463:-1:exon

LOC117439033
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439033
product: growth arrest-specific protein 7-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034074726.1
SIO_010081: LOC117439033
subclass of: SO_0000673
so part of: LOC117439033
location: complement(join(2496438..2497463,2498650..2498748,2499543..2499622,2501054..2501177,2501482..2501610,2504535..2504613,2508167..2508241,2508431..2508546,2513090..2513179,2548466..2548519,2567328..2567445,2576773..2576881))
location: region:2496438-2576881:-1
so has part: feature:2576773-2576881:-1:exon
so has part: feature:2567328-2567445:-1:exon
so has part: feature:2548466-2548519:-1:exon
so has part: feature:2513090-2513179:-1:exon
so has part: feature:2508431-2508546:-1:exon
so has part: feature:2508167-2508241:-1:exon
so has part: feature:2504535-2504613:-1:exon
so has part: feature:2501482-2501610:-1:exon
so has part: feature:2501054-2501177:-1:exon
so has part: feature:2499543-2499622:-1:exon
so has part: feature:2498650-2498748:-1:exon
so has part: feature:2496438-2497463:-1:exon

position:2576881:-1
position: 2576881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2576773-2576881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2567328-2567445:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2548466-2548519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2513090-2513179:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2508431-2508546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2508167-2508241:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2504535-2504613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2501482-2501610:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2501054-2501177:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2499543-2499622:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2498650-2498748:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2496438-2497463:-1:exon

LOC117439033
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest-specific protein 7-like isoform X4
translation: MSGSYCRSLYPFSGEQHPQGLSFHAGDMIEVLQAAPGGWWRGQREGSSGWFPSSYVQVLEVNCVTFPSLACMQEQQLLKPNEWSYCDFFWADKKDPQGTSCLTGFEVLLQKQLKGKQIQKEMAEFIRERIKIEEEYAKSLSKLSQIPLASQEEGTVGECWAQLKKSLEDEAEVHLKFSSKLQSEVEKPLLTFREHFKKDMKRYEHHIADLRKQLGGRHASVEKARKALADRQKDLELKTQQLEIKLSNKIEEDIKKARRKSTQAGDDLMRCVDLYNQSQSRWFEETVTTSLELEQLEVERVEVIRHHLCQYTALRHETDMFNQSTMERVDQLLQSVDPIKDRELWVEENKTGEIRPVNVEI
SIO_010081: LOC117439033
subclass of: SO_0000673
so part of: LOC117439033
location: complement(join(2497350..2497463,2498650..2498748,2499543..2499622,2501054..2501177,2501482..2501610,2504535..2504613,2508167..2508241,2508431..2508546,2513090..2513179,2576773..2576952))
location: region:2497350-2576952:-1
so has part: feature:2576773-2576952:-1:exon
so has part: feature:2513090-2513179:-1:exon
so has part: feature:2508431-2508546:-1:exon
so has part: feature:2508167-2508241:-1:exon
so has part: feature:2504535-2504613:-1:exon
so has part: feature:2501482-2501610:-1:exon
so has part: feature:2501054-2501177:-1:exon
so has part: feature:2499543-2499622:-1:exon
so has part: feature:2498650-2498748:-1:exon
so has part: feature:2497350-2497463:-1:exon

XP_033930618.1
type: Protein
SIO_000068: ncbiprotein

position:2497350:-1
position: 2497350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2576952:-1
position: 2576952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2576773-2576952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513090-2513179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2508431-2508546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2508167-2508241:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2504535-2504613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2501482-2501610:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2501054-2501177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2499543-2499622:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2498650-2498748:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2497350-2497463:-1:exon

LOC117439033
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest-specific protein 7-like isoform X2
translation: MSGSYCRSLYPFSGEQHPQGLSFHAGDMIEVLQAAPGGWWRGQREGSSGWFPSSYVQVLESPGSTSATKKQNKETTVTVNCVTFPSLACMQEQQLLKPNEWSYCDFFWADKKDPQGTSCLTGFEVLLQKQLKGKQIQKEMAEFIRERIKIEEEYAKSLSKLSQIPLASQEEGTVGECWAQLKKSLEDEAEVHLKFSSKLQSEVEKPLLTFREHFKKDMKRYEHHIADLRKQLGGRHASVEKARKALADRQKDLELKTQQLEIKLSNKIEEDIKKARRKSTQAGDDLMRCVDLYNQSQSRWFEETVTTSLELEQLEVERVEVIRHHLCQYTALRHETDMFNQSTMERVDQLLQSVDPIKDRELWVEENKTGEIRPVNVEI
SIO_010081: LOC117439033
subclass of: SO_0000673
so part of: LOC117439033
location: complement(join(2497350..2497463,2498650..2498748,2499543..2499622,2501054..2501177,2501482..2501610,2504535..2504613,2508167..2508241,2508431..2508546,2513090..2513179,2548466..2548519,2576773..2576952))
location: region:2497350-2576952:-1
so has part: feature:2576773-2576952:-1:exon
so has part: feature:2548466-2548519:-1:exon
so has part: feature:2513090-2513179:-1:exon
so has part: feature:2508431-2508546:-1:exon
so has part: feature:2508167-2508241:-1:exon
so has part: feature:2504535-2504613:-1:exon
so has part: feature:2501482-2501610:-1:exon
so has part: feature:2501054-2501177:-1:exon
so has part: feature:2499543-2499622:-1:exon
so has part: feature:2498650-2498748:-1:exon
so has part: feature:2497350-2497463:-1:exon

XP_033930616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2576773-2576952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2548466-2548519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2513090-2513179:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2508431-2508546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2508167-2508241:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2504535-2504613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2501482-2501610:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2501054-2501177:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2499543-2499622:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2498650-2498748:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2497350-2497463:-1:exon

LOC117439033
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest-specific protein 7-like isoform X1
translation: MSGSYCRSLYPFSGEQHPQGLSFHAGDMIEVLQAAPGGWWRGQREGSSGWFPSSYVQVLERTASLCQLPVEGLRDPLPPQWRCYMSPQGCRYYVNTTSNGFDRVSFSLQSPGSTSATKKQNKETTVTVNCVTFPSLACMQEQQLLKPNEWSYCDFFWADKKDPQGTSCLTGFEVLLQKQLKGKQIQKEMAEFIRERIKIEEEYAKSLSKLSQIPLASQEEGTVGECWAQLKKSLEDEAEVHLKFSSKLQSEVEKPLLTFREHFKKDMKRYEHHIADLRKQLGGRHASVEKARKALADRQKDLELKTQQLEIKLSNKIEEDIKKARRKSTQAGDDLMRCVDLYNQSQSRWFEETVTTSLELEQLEVERVEVIRHHLCQYTALRHETDMFNQSTMERVDQLLQSVDPIKDRELWVEENKTGEIRPVNVEI
SIO_010081: LOC117439033
subclass of: SO_0000673
so part of: LOC117439033
location: complement(join(2497350..2497463,2498650..2498748,2499543..2499622,2501054..2501177,2501482..2501610,2504535..2504613,2508167..2508241,2508431..2508546,2513090..2513179,2548466..2548548,2567328..2567445,2576773..2576952))
location: region:2497350-2576952:-1
so has part: feature:2576773-2576952:-1:exon
so has part: feature:2567328-2567445:-1:exon
so has part: feature:2548466-2548548:-1:exon
so has part: feature:2513090-2513179:-1:exon
so has part: feature:2508431-2508546:-1:exon
so has part: feature:2508167-2508241:-1:exon
so has part: feature:2504535-2504613:-1:exon
so has part: feature:2501482-2501610:-1:exon
so has part: feature:2501054-2501177:-1:exon
so has part: feature:2499543-2499622:-1:exon
so has part: feature:2498650-2498748:-1:exon
so has part: feature:2497350-2497463:-1:exon

XP_033930615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2576773-2576952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2567328-2567445:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2548466-2548548:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2513090-2513179:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2508431-2508546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2508167-2508241:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2504535-2504613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2501482-2501610:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2501054-2501177:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2499543-2499622:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2498650-2498748:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2497350-2497463:-1:exon

LOC117439033
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest-specific protein 7-like isoform X3
translation: MCRSWRGQHLSVSSLWRGSETPCLLSGDATCLHKAADTTSTPQATSPGSTSATKKQNKETTVTVNCVTFPSLACMQEQQLLKPNEWSYCDFFWADKKDPQGTSCLTGFEVLLQKQLKGKQIQKEMAEFIRERIKIEEEYAKSLSKLSQIPLASQEEGTVGECWAQLKKSLEDEAEVHLKFSSKLQSEVEKPLLTFREHFKKDMKRYEHHIADLRKQLGGRHASVEKARKALADRQKDLELKTQQLEIKLSNKIEEDIKKARRKSTQAGDDLMRCVDLYNQSQSRWFEETVTTSLELEQLEVERVEVIRHHLCQYTALRHETDMFNQSTMERVDQLLQSVDPIKDRELWVEENKTGEIRPVNVEI
SIO_010081: LOC117439033
subclass of: SO_0000673
so part of: LOC117439033
location: complement(join(2497350..2497463,2498650..2498748,2499543..2499622,2501054..2501177,2501482..2501610,2504535..2504613,2508167..2508241,2508431..2508546,2513090..2513179,2548466..2548519,2567328..2567445,2576773..2576789))
location: region:2497350-2576789:-1
so has part: feature:2576773-2576789:-1:exon
so has part: feature:2567328-2567445:-1:exon
so has part: feature:2548466-2548519:-1:exon
so has part: feature:2513090-2513179:-1:exon
so has part: feature:2508431-2508546:-1:exon
so has part: feature:2508167-2508241:-1:exon
so has part: feature:2504535-2504613:-1:exon
so has part: feature:2501482-2501610:-1:exon
so has part: feature:2501054-2501177:-1:exon
so has part: feature:2499543-2499622:-1:exon
so has part: feature:2498650-2498748:-1:exon
so has part: feature:2497350-2497463:-1:exon

XP_033930617.1
type: Protein
SIO_000068: ncbiprotein

position:2576789:-1
position: 2576789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2576773-2576789:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2567328-2567445:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2548466-2548519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2513090-2513179:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2508431-2508546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2508167-2508241:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2504535-2504613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2501482-2501610:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2501054-2501177:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2499543-2499622:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2498650-2498748:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2497350-2497463:-1:exon

LOC117439033
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439033
product: growth arrest-specific protein 7-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034074728.1
SIO_010081: LOC117439033
subclass of: SO_0000673
so part of: LOC117439033
location: complement(join(2498660..2498748,2499543..2499622,2501035..2501177,2501482..2501610,2504535..2504613,2508167..2508241,2508431..2508546,2513090..2513179,2548466..2548548,2567328..2567445,2576773..2577044))
location: region:2498660-2577044:-1
so has part: feature:2576773-2577044:-1:exon
so has part: feature:2567328-2567445:-1:exon
so has part: feature:2548466-2548548:-1:exon
so has part: feature:2513090-2513179:-1:exon
so has part: feature:2508431-2508546:-1:exon
so has part: feature:2508167-2508241:-1:exon
so has part: feature:2504535-2504613:-1:exon
so has part: feature:2501482-2501610:-1:exon
so has part: feature:2501035-2501177:-1:exon
so has part: feature:2499543-2499622:-1:exon
so has part: feature:2498660-2498748:-1:exon

position:2498660:-1
position: 2498660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2576773-2577044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2567328-2567445:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2548466-2548548:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2513090-2513179:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2508431-2508546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2508167-2508241:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2504535-2504613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2501482-2501610:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2501035-2501177:-1:exon

position:2501035:-1
position: 2501035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2499543-2499622:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2498660-2498748:-1:exon

LOC117439033
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest-specific protein 7-like isoform X5
translation: MSGSYCRSLYPFSGEQHPQGLSFHAGDMIEVLQAAPGGWWRGQREGSSGWFPSSYVQVLERTASLCQLPVEGLRDPLPPQWRCYMSPQGCRYYVNTTSNGFDRVSFSLQSPGSTSATKKQNKETTVTVNCVTFPSLACMQEQQLLKPNEWSYCDFFWADKKDPQGTSCLTGFEVLLQKQLKGKQIQKEMAEFIRERIKIEEEYAKSLSKLSQIPLASQEEGTVGECWAQLKKSLEDEAEVHLKFSSKLQSEVEKPLLTFREHFKKDMKRYEHHIADLRKQLGGRHASVEKARKALADRQKDLELKTQQLEIKLSNKIEEDIKKARRKSTQAGQRRGQRRRSDALCGPL
SIO_010081: LOC117439033
subclass of: SO_0000673
so part of: LOC117439033
location: complement(join(2499589..2499622,2501035..2501177,2501482..2501610,2504535..2504613,2508167..2508241,2508431..2508546,2513090..2513179,2548466..2548548,2567328..2567445,2576773..2576952))
location: region:2499589-2576952:-1
so has part: feature:2576773-2576952:-1:exon
so has part: feature:2567328-2567445:-1:exon
so has part: feature:2548466-2548548:-1:exon
so has part: feature:2513090-2513179:-1:exon
so has part: feature:2508431-2508546:-1:exon
so has part: feature:2508167-2508241:-1:exon
so has part: feature:2504535-2504613:-1:exon
so has part: feature:2501482-2501610:-1:exon
so has part: feature:2501035-2501177:-1:exon
so has part: feature:2499589-2499622:-1:exon

XP_033930619.1
type: Protein
SIO_000068: ncbiprotein

position:2499589:-1
position: 2499589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2576773-2576952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2567328-2567445:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2548466-2548548:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2513090-2513179:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2508431-2508546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2508167-2508241:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2504535-2504613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2501482-2501610:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2501035-2501177:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2499589-2499622:-1:exon

LOC117439034
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2508818..2511095)
location: region:2508818-2511095:-1
so has part: feature:2508818-2511095:-1:exon
subclass of: SO_0000010

117439034
type: Gene
SIO_000068: ncbigene

position:2508818:-1
position: 2508818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2511095:-1
position: 2511095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2508818-2511095:-1:exon

LOC117439034
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439034
product: uncharacterized LOC117439034, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034074730.1
SIO_010081: LOC117439034
subclass of: SO_0000673
so part of: LOC117439034
location: complement(join(2508818..2509464,2509568..2509706,2509795..2509909,2510083..2510178,2510284..2510420,2510516..2510789,2510923..2511095))
location: region:2508818-2511095:-1
so has part: feature:2510923-2511095:-1:exon
so has part: feature:2510516-2510789:-1:exon
so has part: feature:2510284-2510420:-1:exon
so has part: feature:2510083-2510178:-1:exon
so has part: feature:2509795-2509909:-1:exon
so has part: feature:2509568-2509706:-1:exon
so has part: feature:2508818-2509464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2510923-2511095:-1:exon

position:2510923:-1
position: 2510923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2510516-2510789:-1:exon

position:2510516:-1
position: 2510516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2510789:-1
position: 2510789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2510284-2510420:-1:exon

position:2510284:-1
position: 2510284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2510420:-1
position: 2510420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2510083-2510178:-1:exon

position:2510083:-1
position: 2510083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2510178:-1
position: 2510178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2509795-2509909:-1:exon

position:2509795:-1
position: 2509795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2509909:-1
position: 2509909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2509568-2509706:-1:exon

position:2509568:-1
position: 2509568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2509706:-1
position: 2509706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2508818-2509464:-1:exon

position:2509464:-1
position: 2509464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439034
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439034
product: uncharacterized LOC117439034, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034074731.1
SIO_010081: LOC117439034
subclass of: SO_0000673
so part of: LOC117439034
location: complement(join(2508818..2509464,2509568..2509706,2509795..2509899,2510083..2510178,2510284..2510420,2510516..2511095))
location: region:2508818-2511095:-1
so has part: feature:2510516-2511095:-1:exon
so has part: feature:2510284-2510420:-1:exon
so has part: feature:2510083-2510178:-1:exon
so has part: feature:2509795-2509899:-1:exon
so has part: feature:2509568-2509706:-1:exon
so has part: feature:2508818-2509464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2510516-2511095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2510284-2510420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2510083-2510178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2509795-2509899:-1:exon

position:2509899:-1
position: 2509899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2509568-2509706:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2508818-2509464:-1:exon

LOC117439034
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117439034
translation: MWDRRLTRSGARTQSCSVGATAYITTAVCLQKKLPLASPTLTALSALDPLLRGHSQATIQLKRLSGMLRHLLPADQDIQRELVRFNVDLTIPSFKEGESMVEWWGHVFDKPDKCPSLSAMVTCCLSIFHGPRVESSFSLMNEVIDQRSGNMNVPTFNAIQTVKYTLQSRGKTAVQLFRREDVKFGEVDRTLCKNINSAAATYKRQQKMNQKEKQQQQSKYGSQASGSAQQAKKQNAEEEKRARLRHVAKQR
SIO_010081: LOC117439034
subclass of: SO_0000673
so part of: LOC117439034
location: complement(join(2508897..2509464,2509568..2509706,2509795..2509843))
location: region:2508897-2509843:-1
so has part: feature:2509795-2509843:-1:exon
so has part: feature:2509568-2509706:-1:exon
so has part: feature:2508897-2509464:-1:exon

XP_033930621.1
type: Protein
SIO_000068: ncbiprotein

position:2508897:-1
position: 2508897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2509843:-1
position: 2509843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2509795-2509843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2509568-2509706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2508897-2509464:-1:exon

LOC117439034
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117439034
translation: MWDRRLTRSGARTQSCSVGATAYITTAVCLQKKLPLASPTLTALSALDPLLRGHSQATIQLKRLSGMLRHLLPADQDIQRELVRFNVDLTIPSFKEGESMVEWWGHVFDKPDKCPSLSAMVTCCLSIFHGPRVESSFSLMNEVIDQRSGNMNVPTFNAIQTVKYTLQSRGKTAVQLFRREDVKFGEVDRTLCKNINSAAATYKRQQKMNQKEKQQQQSKYGSQASGSAQQAKKQNAEEEKRARLRHVAKQR
SIO_010081: LOC117439034
subclass of: SO_0000673
so part of: LOC117439034
location: complement(join(2508897..2509464,2509568..2509706,2509795..2509843))
location: region:2508897-2509843:-1
so has part: feature:2509795-2509843:-1:exon
so has part: feature:2509568-2509706:-1:exon
so has part: feature:2508897-2509464:-1:exon

XP_033930622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2509795-2509843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2509568-2509706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2508897-2509464:-1:exon

rsph1
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: rsph1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2579105..2585613
location: region:2579105-2585613:1
so has part: feature:2579105-2585613:1:exon
subclass of: SO_0000010

117439242
type: Gene
SIO_000068: ncbigene

position:2579105:1
position: 2579105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2585613:1
position: 2585613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2579105-2585613:1:exon

rsph1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: rsph1
product: radial spoke head component 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034075070.1
SIO_010081: rsph1
subclass of: SO_0000673
so part of: rsph1
location: join(2579105..2579208,2579338..2579451,2580017..2580122,2580241..2580331,2581154..2581289,2584483..2584551,2585244..2585349,2585524..2585613)
location: region:2579105-2585613:1
so has part: feature:2579105-2579208:1:exon
so has part: feature:2579338-2579451:1:exon
so has part: feature:2580017-2580122:1:exon
so has part: feature:2580241-2580331:1:exon
so has part: feature:2581154-2581289:1:exon
so has part: feature:2584483-2584551:1:exon
so has part: feature:2585244-2585349:1:exon
so has part: feature:2585524-2585613:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2579105-2579208:1:exon

position:2579208:1
position: 2579208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2579338-2579451:1:exon

position:2579338:1
position: 2579338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2579451:1
position: 2579451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2580017-2580122:1:exon

position:2580017:1
position: 2580017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2580122:1
position: 2580122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2580241-2580331:1:exon

position:2580241:1
position: 2580241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2580331:1
position: 2580331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2581154-2581289:1:exon

position:2581154:1
position: 2581154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2581289:1
position: 2581289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2584483-2584551:1:exon

position:2584483:1
position: 2584483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2584551:1
position: 2584551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2585244-2585349:1:exon

position:2585244:1
position: 2585244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2585349:1
position: 2585349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2585524-2585613:1:exon

position:2585524:1
position: 2585524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rsph1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: rsph1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: radial spoke head 1 homolog
translation: MSDVGSDEFDDERGKLGEYDGGRNGAGERHGAGRAVLPNGDVYQGGYESGRRHGQGTYCFKNGARYVGDYYQNMKHGHGTFYYPDGSKYEGLWVEDLRQGHGLYTYPNGDAYEGEWLHHMRHGQGIYNYHETVSKYKGSWVNGKMESAGEYIHSNNRYMGNFVNNNPSGPGKYVFDGCEQHGEYRPAEQDRAEGEWGESGSPAILKWIPKCVTELTLWTGTHTSCAENGRASAEAEN
SIO_010081: rsph1
subclass of: SO_0000673
so part of: rsph1
location: join(2579158..2579208,2579338..2579451,2580017..2580122,2580241..2580331,2581154..2581289,2584483..2584551,2585244..2585349,2585524..2585564)
location: region:2579158-2585564:1
so has part: feature:2579158-2579208:1:exon
so has part: feature:2579338-2579451:1:exon
so has part: feature:2580017-2580122:1:exon
so has part: feature:2580241-2580331:1:exon
so has part: feature:2581154-2581289:1:exon
so has part: feature:2584483-2584551:1:exon
so has part: feature:2585244-2585349:1:exon
so has part: feature:2585524-2585564:1:exon

XP_033930961.1
type: Protein
SIO_000068: ncbiprotein

position:2579158:1
position: 2579158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2585564:1
position: 2585564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2579158-2579208:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2579338-2579451:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2580017-2580122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2580241-2580331:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2581154-2581289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2584483-2584551:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2585244-2585349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2585524-2585564:1:exon

adprm
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: adprm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2625421..2628589
location: region:2625421-2628589:1
so has part: feature:2625421-2628589:1:exon
subclass of: SO_0000010

117439074
type: Gene
SIO_000068: ncbigene

position:2625421:1
position: 2625421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2628589:1
position: 2628589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2625421-2628589:1:exon

adprm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: adprm
product: ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_034074794.1
SIO_010081: adprm
subclass of: SO_0000673
so part of: adprm
location: join(2625421..2626115,2626783..2626905,2627781..2628589)
location: region:2625421-2628589:1
so has part: feature:2625421-2626115:1:exon
so has part: feature:2626783-2626905:1:exon
so has part: feature:2627781-2628589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2625421-2626115:1:exon

position:2626115:1
position: 2626115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2626783-2626905:1:exon

position:2626783:1
position: 2626783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2626905:1
position: 2626905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2627781-2628589:1:exon

position:2627781:1
position: 2627781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

adprm
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: adprm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
translation: MDGCPSTPLFTFGVIADIQYADLEDGFNYSRTRKRFYRSSLQLLKNAQRSWAESAVRPEFILQLGDIIDGFNKGHGASERALDTVLREFSVPAEVHHVWGNHEFYNFSRSALLRSRLNSSALHRDRDLSGDVYAYSFSPAPGFTFVVLDAYDVSLLGREPSSEQYGQAMDLIKLYNNNDDLNCPPVLEGLQRRFTMFNGGFGQEQLDWLHALLTASDDKRDRVTIFSHVPVHPGSTDPICLAWNYEELLAVIRAHSSVVCYMAGHSHDGGYCQDKDTGVHHVTIDGVIETPPDSDAFSTVSVYADRMVLKGEGRVEDRVFLFPS
SIO_010081: adprm
subclass of: SO_0000673
so part of: adprm
location: join(2625560..2626115,2626783..2626905,2627781..2628076)
location: region:2625560-2628076:1
so has part: feature:2625560-2626115:1:exon
so has part: feature:2626783-2626905:1:exon
so has part: feature:2627781-2628076:1:exon

XP_033930685.1
type: Protein
SIO_000068: ncbiprotein

position:2625560:1
position: 2625560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2628076:1
position: 2628076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2625560-2626115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2626783-2626905:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2627781-2628076:1:exon

map2k4b
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: map2k4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2667071..2686163
location: region:2667071-2686163:1
so has part: feature:2667071-2686163:1:exon
subclass of: SO_0000010

117468287
type: Gene
SIO_000068: ncbigene

position:2667071:1
position: 2667071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2686163:1
position: 2686163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2667071-2686163:1:exon

map2k4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: map2k4b
product: mitogen-activated protein kinase kinase 4b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_034112318.1
SIO_010081: map2k4b
subclass of: SO_0000673
so part of: map2k4b
location: join(2667071..2667396,2675359..2675394,2679974..2680076,2680542..2680716,2681421..2681540,2681615..2681734,2681824..2681875,2681976..2682103,2682954..2683031,2683114..2683262,2683427..2683472,2684741..2686163)
location: region:2667071-2686163:1
so has part: feature:2667071-2667396:1:exon
so has part: feature:2675359-2675394:1:exon
so has part: feature:2679974-2680076:1:exon
so has part: feature:2680542-2680716:1:exon
so has part: feature:2681421-2681540:1:exon
so has part: feature:2681615-2681734:1:exon
so has part: feature:2681824-2681875:1:exon
so has part: feature:2681976-2682103:1:exon
so has part: feature:2682954-2683031:1:exon
so has part: feature:2683114-2683262:1:exon
so has part: feature:2683427-2683472:1:exon
so has part: feature:2684741-2686163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2667071-2667396:1:exon

position:2667396:1
position: 2667396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2675359-2675394:1:exon

position:2675359:1
position: 2675359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2675394:1
position: 2675394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2679974-2680076:1:exon

position:2679974:1
position: 2679974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2680076:1
position: 2680076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2680542-2680716:1:exon

position:2680542:1
position: 2680542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2680716:1
position: 2680716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2681421-2681540:1:exon

position:2681421:1
position: 2681421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2681540:1
position: 2681540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2681615-2681734:1:exon

position:2681615:1
position: 2681615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2681734:1
position: 2681734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2681824-2681875:1:exon

position:2681824:1
position: 2681824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2681875:1
position: 2681875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2681976-2682103:1:exon

position:2681976:1
position: 2681976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2682103:1
position: 2682103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2682954-2683031:1:exon

position:2682954:1
position: 2682954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2683031:1
position: 2683031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2683114-2683262:1:exon

position:2683114:1
position: 2683114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2683262:1
position: 2683262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2683427-2683472:1:exon

position:2683427:1
position: 2683427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2683472:1
position: 2683472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2684741-2686163:1:exon

position:2684741:1
position: 2684741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

map2k4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: map2k4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity mitogen-activated protein kinase kinase 4b
translation: MASPCPESNSKQSSSTVGSASPRFHQQSPDSSMQETNTCWRCQNETGKRKALKLNFANPPVKAASRLPLHPAAPPFQNPHIERLRTHSIESSGKLKISPEQHCDFTAEDLRDLGEIGRGAYGSVNKMVHKPTEQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMATSLDKFYKYVYCALDDVIPEEILGKVTLATVKALNHLKENLKIIHRDIKPSNILMDRTGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGEPPQLSSSEDRQFSPRFISFVNLSLTKDESKRPKYKELLKHPFILMYEERCVDVAGYVCRILDQCPPSPLAPMCVD
SIO_010081: map2k4b
subclass of: SO_0000673
so part of: map2k4b
location: join(2667294..2667396,2675359..2675394,2679974..2680076,2680542..2680716,2681421..2681540,2681615..2681734,2681824..2681875,2681976..2682103,2682954..2683031,2683114..2683262,2683427..2683472,2684741..2684854)
location: region:2667294-2684854:1
so has part: feature:2667294-2667396:1:exon
so has part: feature:2675359-2675394:1:exon
so has part: feature:2679974-2680076:1:exon
so has part: feature:2680542-2680716:1:exon
so has part: feature:2681421-2681540:1:exon
so has part: feature:2681615-2681734:1:exon
so has part: feature:2681824-2681875:1:exon
so has part: feature:2681976-2682103:1:exon
so has part: feature:2682954-2683031:1:exon
so has part: feature:2683114-2683262:1:exon
so has part: feature:2683427-2683472:1:exon
so has part: feature:2684741-2684854:1:exon

XP_033968209.1
type: Protein
SIO_000068: ncbiprotein

position:2667294:1
position: 2667294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2684854:1
position: 2684854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2667294-2667396:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2675359-2675394:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2679974-2680076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2680542-2680716:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2681421-2681540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2681615-2681734:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2681824-2681875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2681976-2682103:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2682954-2683031:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2683114-2683262:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2683427-2683472:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2684741-2684854:1:exon

myocd
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: myocd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2686091..2721541)
location: region:2686091-2721541:-1
so has part: feature:2686091-2721541:-1:exon
subclass of: SO_0000010

117468286
type: Gene
SIO_000068: ncbigene

position:2686091:-1
position: 2686091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2721541:-1
position: 2721541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2686091-2721541:-1:exon

myocd
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: myocd
product: myocardin
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034112317.1
SIO_010081: myocd
subclass of: SO_0000673
so part of: myocd
location: complement(join(2686091..2688731,2688853..2688910,2689819..2689948,2690239..2690370,2702725..2703204,2704243..2704743,2704824..2704971,2705483..2705778,2705861..2705968,2707507..2707688,2721274..2721541))
location: region:2686091-2721541:-1
so has part: feature:2721274-2721541:-1:exon
so has part: feature:2707507-2707688:-1:exon
so has part: feature:2705861-2705968:-1:exon
so has part: feature:2705483-2705778:-1:exon
so has part: feature:2704824-2704971:-1:exon
so has part: feature:2704243-2704743:-1:exon
so has part: feature:2702725-2703204:-1:exon
so has part: feature:2690239-2690370:-1:exon
so has part: feature:2689819-2689948:-1:exon
so has part: feature:2688853-2688910:-1:exon
so has part: feature:2686091-2688731:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2721274-2721541:-1:exon

position:2721274:-1
position: 2721274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2707507-2707688:-1:exon

position:2707507:-1
position: 2707507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2707688:-1
position: 2707688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2705861-2705968:-1:exon

position:2705861:-1
position: 2705861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2705968:-1
position: 2705968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2705483-2705778:-1:exon

position:2705483:-1
position: 2705483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2705778:-1
position: 2705778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2704824-2704971:-1:exon

position:2704824:-1
position: 2704824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2704971:-1
position: 2704971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2704243-2704743:-1:exon

position:2704243:-1
position: 2704243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2704743:-1
position: 2704743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2702725-2703204:-1:exon

position:2702725:-1
position: 2702725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2703204:-1
position: 2703204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2690239-2690370:-1:exon

position:2690239:-1
position: 2690239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2690370:-1
position: 2690370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2689819-2689948:-1:exon

position:2689819:-1
position: 2689819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2689948:-1
position: 2689948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2688853-2688910:-1:exon

position:2688853:-1
position: 2688853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2688910:-1
position: 2688910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2686091-2688731:-1:exon

position:2688731:-1
position: 2688731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

myocd
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: myocd
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: myocardin
translation: MTLLGSEHSILIRSKFRSVTHGTFPQHEDSYAFEEDSSSESLSPEQQNSEESEAAAATPSSSSSSSSSSSSPALSSLPQGRTHRDPPADHSQDEGLSASDRSQTSPPIPVPAIVKSKSSDKNRHKKPKDVKPKVKKLKYHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQILSQQKHAHTHPHTHTPQAQAQQRQPSFSFQPHLPSQANKGVSETLSAPSSQANSSSSSPVKNPYSSSSSSSMSPAPPGPLPANLDDLKVSELRQQLRVRGMPVSGTKTALIERLRPFKDSNAGSSPSGSSDITTVTFPVTPTASLSSYQSPSQGGYYPYPSTSSTPPISPASSELSLTGSLPDSFSDVPMSSPTLFTLQPSPAQLSMEEGLGRGRTRSGEGGGLNGVEAEKDKMLVEKQKVIEELTWKLHQEQRQVEELRMQLHRRKRCYRASHDTIPPTPHPPMLHQRTPAMLGQHFFGVTIKQEPTSLSASCPLSSPKLLKCSPRSSCMEDVGHCSKLPSNMRGPGGPPCMDPTSGSPPTMSAFLSPQCSPQDSPIGKPSSPQPSSPNNPYLLAPPPGRGHPHPQGNRAHSMQMQQKSGVQAGGFPYPSEQQALQGVFHPPPSCDPARPEPHTLQPKMSVLPSPRHVGPKCQVAPPAFSSSDSDASDLRQPPCYEDAVKQQLTRSQQMDELLDVLIESGEMPANAREERERASVTKVVPHITVSPGCPGLLIPRFHRHYEQLPPNQLPYDHSANHIAESHLENLLGSPIVRGGEVALLKMSAEDGGQDDEPNREGNGYSSPHNPHRLPHHSPQDKHVTNRDLIDTPLSPISTKVTSEVQGMVSMTFSETPWEAMEWLDLTPPSSATAFSMAPPNGPNIFNTEFLDVTDMNLNSAMDLHLEHW
SIO_010081: myocd
subclass of: SO_0000673
so part of: myocd
location: complement(join(2688121..2688731,2688853..2688910,2689819..2689948,2690239..2690370,2702725..2703204,2704243..2704743,2704824..2704971,2705483..2705778,2705861..2705968,2707507..2707688,2721274..2721328))
location: region:2688121-2721328:-1
so has part: feature:2721274-2721328:-1:exon
so has part: feature:2707507-2707688:-1:exon
so has part: feature:2705861-2705968:-1:exon
so has part: feature:2705483-2705778:-1:exon
so has part: feature:2704824-2704971:-1:exon
so has part: feature:2704243-2704743:-1:exon
so has part: feature:2702725-2703204:-1:exon
so has part: feature:2690239-2690370:-1:exon
so has part: feature:2689819-2689948:-1:exon
so has part: feature:2688853-2688910:-1:exon
so has part: feature:2688121-2688731:-1:exon

XP_033968208.1
type: Protein
SIO_000068: ncbiprotein

position:2688121:-1
position: 2688121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2721328:-1
position: 2721328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2721274-2721328:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2707507-2707688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2705861-2705968:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2705483-2705778:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2704824-2704971:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2704243-2704743:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2702725-2703204:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2690239-2690370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2689819-2689948:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2688853-2688910:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2688121-2688731:-1:exon

LOC117468332
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117468332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2980488..2981074)
location: region:2980488-2981074:-1
so has part: feature:2980488-2981074:-1:exon
subclass of: SO_0000011

117468332
type: Gene
SIO_000068: ncbigene

position:2980488:-1
position: 2980488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2981074:-1
position: 2981074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2980488-2981074:-1:exon

LOC117468332
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117468332
product: uncharacterized LOC117468332
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004554469.1
SIO_010081: LOC117468332
subclass of: SO_0000673
so part of: LOC117468332
location: complement(join(2980488..2980532,2980697..2980875,2981002..2981074))
location: region:2980488-2981074:-1
so has part: feature:2981002-2981074:-1:exon
so has part: feature:2980697-2980875:-1:exon
so has part: feature:2980488-2980532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2981002-2981074:-1:exon

position:2981002:-1
position: 2981002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2980697-2980875:-1:exon

position:2980697:-1
position: 2980697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2980875:-1
position: 2980875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2980488-2980532:-1:exon

position:2980532:-1
position: 2980532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dnah9
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: dnah9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3037217..3043756
location: region:3037217-3043756:1
so has part: feature:3037217-3043756:1:exon
subclass of: SO_0000010

117468375
type: Gene
SIO_000068: ncbigene

position:3037217:1
position: 3037217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3043756:1
position: 3043756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3037217-3043756:1:exon

dnah9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: dnah9
product: dynein, axonemal, heavy chain 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034112448.1
SIO_010081: dnah9
subclass of: SO_0000673
so part of: dnah9
location: join(3037217..3037592,3038808..3039004,3039078..3039236,3039805..3039935,3040059..3040270,3040879..3041112,3042616..3042783,3043053..3043169,3043250..3043400,3043638..3043756)
location: region:3037217-3043756:1
so has part: feature:3037217-3037592:1:exon
so has part: feature:3038808-3039004:1:exon
so has part: feature:3039078-3039236:1:exon
so has part: feature:3039805-3039935:1:exon
so has part: feature:3040059-3040270:1:exon
so has part: feature:3040879-3041112:1:exon
so has part: feature:3042616-3042783:1:exon
so has part: feature:3043053-3043169:1:exon
so has part: feature:3043250-3043400:1:exon
so has part: feature:3043638-3043756:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3037217-3037592:1:exon

position:3037592:1
position: 3037592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3038808-3039004:1:exon

position:3038808:1
position: 3038808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3039004:1
position: 3039004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3039078-3039236:1:exon

position:3039078:1
position: 3039078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3039236:1
position: 3039236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3039805-3039935:1:exon

position:3039805:1
position: 3039805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3039935:1
position: 3039935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3040059-3040270:1:exon

position:3040059:1
position: 3040059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3040270:1
position: 3040270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3040879-3041112:1:exon

position:3040879:1
position: 3040879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3041112:1
position: 3041112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3042616-3042783:1:exon

position:3042616:1
position: 3042616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3042783:1
position: 3042783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3043053-3043169:1:exon

position:3043053:1
position: 3043053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3043169:1
position: 3043169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3043250-3043400:1:exon

position:3043250:1
position: 3043250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3043400:1
position: 3043400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3043638-3043756:1:exon

position:3043638:1
position: 3043638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dnah9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: dnah9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein heavy chain 9, axonemal
translation: MEPPAEDSRLAFIRDYVLRTLRLQPDHWHSCVSSEDNQRVLQDFLDRAEQRTLVVSVTVAGQLQPAAALPSSPASSSRGRAVYFVKRSRSVLPRDCMEESLLYGDLSHNALQHFSALVEEVVAPLLFNSKNHTEWPQVVSQDVRRHVHSLRTHALVVSGQVHGRTLLPLPAGCQNVEQADLETDKRGEMVNKSIIHSLESAVIEWSHQIHAVLKKDSSDALLEGHTPTPHSELLFWRDRYADLECIHSQLNSSKVNKMALLLEAVESSYAPAFTSLQQGVLTALEEAEDVHLYLRPLQPLFEDMESAEFPDVRGQIGPLMHTVCLVWANSRHYNTPPRLVVLLQETSNLLIQQARVYLVPEEVLRGELSESLMKVQTTLETLQLFRSTYDERRANLSRYQRNGGPVRPWDFPPLLVFSGLDCFINRVKSIKDILVTAVDLLKLDKLQIGGVRGRALSQQVQVLHRGFVETFKLFTEKPYNCLDLNNEEYEEDLREFKLKVDDTDRQVGAIFCQAFEETSGLEHAFKVLDMFGGLLERPLVATDALDRFPLLVSMFDKELDCCTRLYKKHIKTAEERGWAPVKSNRPAVAGRLRWAQELQLRIKTPFSKFRHLSYP
SIO_010081: dnah9
subclass of: SO_0000673
so part of: dnah9
location: join(3037233..3037592,3038808..3039004,3039078..3039236,3039805..3039935,3040059..3040270,3040879..3041112,3042616..3042783,3043053..3043169,3043250..3043400,3043638..3043756)
location: region:3037233-3043756:1
so has part: feature:3037233-3037592:1:exon
so has part: feature:3038808-3039004:1:exon
so has part: feature:3039078-3039236:1:exon
so has part: feature:3039805-3039935:1:exon
so has part: feature:3040059-3040270:1:exon
so has part: feature:3040879-3041112:1:exon
so has part: feature:3042616-3042783:1:exon
so has part: feature:3043053-3043169:1:exon
so has part: feature:3043250-3043400:1:exon
so has part: feature:3043638-3043756:1:exon

XP_033968339.1
type: Protein
SIO_000068: ncbiprotein

position:3037233:1
position: 3037233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3037233-3037592:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3038808-3039004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3039078-3039236:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3039805-3039935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3040059-3040270:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3040879-3041112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3042616-3042783:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3043053-3043169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3043250-3043400:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3043638-3043756:1:exon

LOC117468377
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117468377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3068512..3069521
location: region:3068512-3069521:1
so has part: feature:3068512-3069521:1:exon
subclass of: SO_0000010

117468377
type: Gene
SIO_000068: ncbigene

position:3068512:1
position: 3068512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3069521:1
position: 3069521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3068512-3069521:1:exon

LOC117468377
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117468377
product: uncharacterized LOC117468377
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034112449.1
SIO_010081: LOC117468377
subclass of: SO_0000673
so part of: LOC117468377
location: join(3068512..3068634,3068800..3069521)
location: region:3068512-3069521:1
so has part: feature:3068512-3068634:1:exon
so has part: feature:3068800-3069521:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3068512-3068634:1:exon

position:3068634:1
position: 3068634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3068800-3069521:1:exon

position:3068800:1
position: 3068800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117468377
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117468377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117468377
translation: MSFLLPYVQQRSSKSSLSNPSPVEDMERASTPLSLETEEHARTACGSPAPPPLVPTTSAERQRPSRSRSPRDPISTPAAAQRSTRDTRRRPQSTDLGEQLISLLQEPPTAPHMPDSELEESYYFALSLVPMLQRLDKDRKHQAKVCILNTFHNLERDTQHQQHWQPIDHPPATQHSIHTSRPVAFRPSVPQPPRAQSTPTGPSDMLSSSSSSAWQESFYEQ
SIO_010081: LOC117468377
subclass of: SO_0000673
so part of: LOC117468377
location: join(3068600..3068634,3068800..3069430)
location: region:3068600-3069430:1
so has part: feature:3068600-3068634:1:exon
so has part: feature:3068800-3069430:1:exon

XP_033968340.1
type: Protein
SIO_000068: ncbiprotein

position:3068600:1
position: 3068600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3069430:1
position: 3069430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3068600-3068634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3068800-3069430:1:exon

LOC117468381
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117468381
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3107070..3108827)
location: region:3107070-3108827:-1
so has part: feature:3107070-3108827:-1:exon
subclass of: SO_0000011

117468381
type: Gene
SIO_000068: ncbigene

position:3107070:-1
position: 3107070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3108827:-1
position: 3108827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3107070-3108827:-1:exon

LOC117468381
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117468381
product: uncharacterized LOC117468381
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004554483.1
SIO_010081: LOC117468381
subclass of: SO_0000673
so part of: LOC117468381
location: complement(join(3107070..3108049,3108382..3108454,3108553..3108827))
location: region:3107070-3108827:-1
so has part: feature:3108553-3108827:-1:exon
so has part: feature:3108382-3108454:-1:exon
so has part: feature:3107070-3108049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3108553-3108827:-1:exon

position:3108553:-1
position: 3108553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3108382-3108454:-1:exon

position:3108382:-1
position: 3108382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3108454:-1
position: 3108454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3107070-3108049:-1:exon

position:3108049:-1
position: 3108049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117468380
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117468380
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3118617..3126509)
location: region:3118617-3126509:-1
so has part: feature:3118617-3126509:-1:exon
subclass of: SO_0000011

117468380
type: Gene
SIO_000068: ncbigene

position:3118617:-1
position: 3118617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3126509:-1
position: 3126509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3118617-3126509:-1:exon

LOC117468380
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117468380
product: uncharacterized LOC117468380, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004554481.1
SIO_010081: LOC117468380
subclass of: SO_0000673
so part of: LOC117468380
location: complement(join(3118617..3119550,3119631..3119674,3119993..3120064,3120256..3120314,3120410..3120485,3120587..3120619,3126414..3126509))
location: region:3118617-3126509:-1
so has part: feature:3126414-3126509:-1:exon
so has part: feature:3120587-3120619:-1:exon
so has part: feature:3120410-3120485:-1:exon
so has part: feature:3120256-3120314:-1:exon
so has part: feature:3119993-3120064:-1:exon
so has part: feature:3119631-3119674:-1:exon
so has part: feature:3118617-3119550:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3126414-3126509:-1:exon

position:3126414:-1
position: 3126414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3120587-3120619:-1:exon

position:3120587:-1
position: 3120587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3120619:-1
position: 3120619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3120410-3120485:-1:exon

position:3120410:-1
position: 3120410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3120485:-1
position: 3120485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3120256-3120314:-1:exon

position:3120256:-1
position: 3120256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3120314:-1
position: 3120314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3119993-3120064:-1:exon

position:3119993:-1
position: 3119993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3120064:-1
position: 3120064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3119631-3119674:-1:exon

position:3119631:-1
position: 3119631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3119674:-1
position: 3119674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3118617-3119550:-1:exon

position:3119550:-1
position: 3119550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117468380
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117468380
product: uncharacterized LOC117468380, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004554480.1
SIO_010081: LOC117468380
subclass of: SO_0000673
so part of: LOC117468380
location: complement(join(3118617..3119674,3119993..3120064,3120256..3120314,3120410..3120485,3120587..3120619,3126414..3126509))
location: region:3118617-3126509:-1
so has part: feature:3126414-3126509:-1:exon
so has part: feature:3120587-3120619:-1:exon
so has part: feature:3120410-3120485:-1:exon
so has part: feature:3120256-3120314:-1:exon
so has part: feature:3119993-3120064:-1:exon
so has part: feature:3118617-3119674:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3126414-3126509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3120587-3120619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3120410-3120485:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3120256-3120314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3119993-3120064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3118617-3119674:-1:exon

LOC117468380
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117468380
product: uncharacterized LOC117468380, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004554482.1
SIO_010081: LOC117468380
subclass of: SO_0000673
so part of: LOC117468380
location: complement(join(3118617..3119674,3119993..3120064,3120252..3120314,3120410..3120485,3120587..3120619,3126414..3126509))
location: region:3118617-3126509:-1
so has part: feature:3126414-3126509:-1:exon
so has part: feature:3120587-3120619:-1:exon
so has part: feature:3120410-3120485:-1:exon
so has part: feature:3120252-3120314:-1:exon
so has part: feature:3119993-3120064:-1:exon
so has part: feature:3118617-3119674:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3126414-3126509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3120587-3120619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3120410-3120485:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3120252-3120314:-1:exon

position:3120252:-1
position: 3120252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3119993-3120064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3118617-3119674:-1:exon

LOC117468383
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117468383
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3121777..3122734)
location: region:3121777-3122734:-1
so has part: feature:3121777-3122734:-1:exon
subclass of: SO_0000011

117468383
type: Gene
SIO_000068: ncbigene

position:3121777:-1
position: 3121777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3122734:-1
position: 3122734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3121777-3122734:-1:exon

LOC117468383
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117468383
product: uncharacterized LOC117468383
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004554485.1
SIO_010081: LOC117468383
subclass of: SO_0000673
so part of: LOC117468383
location: complement(join(3121777..3122118,3122210..3122462,3122543..3122734))
location: region:3121777-3122734:-1
so has part: feature:3122543-3122734:-1:exon
so has part: feature:3122210-3122462:-1:exon
so has part: feature:3121777-3122118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3122543-3122734:-1:exon

position:3122543:-1
position: 3122543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3122210-3122462:-1:exon

position:3122210:-1
position: 3122210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3122462:-1
position: 3122462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3121777-3122118:-1:exon

position:3122118:-1
position: 3122118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439365
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439365
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3127884..3186665
location: region:3127884-3186665:1
so has part: feature:3127884-3186665:1:exon

117439365
type: Gene
SIO_000068: ncbigene

position:3127884:1
position: 3127884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3186665:1
position: 3186665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3127884-3186665:1:exon

LOC117439365
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439365
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 66% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439365
subclass of: SO_0000673
so part of: LOC117439365
location: 3127884..3128074
location: region:3127884-3128074:1
so has part: feature:3127884-3128074:1:exon

position:3128074:1
position: 3128074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3127884-3128074:1:exon

LOC117439365
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439365
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 66% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439365
subclass of: SO_0000673
so part of: LOC117439365
location: 3128244..3128408
location: region:3128244-3128408:1
so has part: feature:3128244-3128408:1:exon

position:3128244:1
position: 3128244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3128408:1
position: 3128408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3128244-3128408:1:exon

LOC117439365
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439365
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 66% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439365
subclass of: SO_0000673
so part of: LOC117439365
location: 3167935..3168103
location: region:3167935-3168103:1
so has part: feature:3167935-3168103:1:exon

position:3167935:1
position: 3167935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3168103:1
position: 3168103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3167935-3168103:1:exon

LOC117439365
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439365
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 66% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439365
subclass of: SO_0000673
so part of: LOC117439365
location: 3182690..3182852
location: region:3182690-3182852:1
so has part: feature:3182690-3182852:1:exon

position:3182690:1
position: 3182690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3182852:1
position: 3182852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3182690-3182852:1:exon

LOC117439365
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439365
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 66% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439365
subclass of: SO_0000673
so part of: LOC117439365
location: 3184127..3184374
location: region:3184127-3184374:1
so has part: feature:3184127-3184374:1:exon

position:3184127:1
position: 3184127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3184374:1
position: 3184374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3184127-3184374:1:exon

LOC117439365
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439365
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 66% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439365
subclass of: SO_0000673
so part of: LOC117439365
location: 3185429..3185491
location: region:3185429-3185491:1
so has part: feature:3185429-3185491:1:exon

position:3185429:1
position: 3185429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3185491:1
position: 3185491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3185429-3185491:1:exon

LOC117439365
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439365
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 66% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439365
subclass of: SO_0000673
so part of: LOC117439365
location: 3186109..3186152
location: region:3186109-3186152:1
so has part: feature:3186109-3186152:1:exon

position:3186109:1
position: 3186109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3186152:1
position: 3186152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3186109-3186152:1:exon

LOC117439365
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439365
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 66% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439365
subclass of: SO_0000673
so part of: LOC117439365
location: 3186600..3186665
location: region:3186600-3186665:1
so has part: feature:3186600-3186665:1:exon

position:3186600:1
position: 3186600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3186600-3186665:1:exon

LOC117468382
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117468382
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3192539..3193340)
location: region:3192539-3193340:-1
so has part: feature:3192539-3193340:-1:exon
subclass of: SO_0000011

117468382
type: Gene
SIO_000068: ncbigene

position:3192539:-1
position: 3192539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3193340:-1
position: 3193340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3192539-3193340:-1:exon

LOC117468382
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117468382
product: uncharacterized LOC117468382
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004554484.1
SIO_010081: LOC117468382
subclass of: SO_0000673
so part of: LOC117468382
location: complement(join(3192539..3192651,3192820..3193016,3193284..3193340))
location: region:3192539-3193340:-1
so has part: feature:3193284-3193340:-1:exon
so has part: feature:3192820-3193016:-1:exon
so has part: feature:3192539-3192651:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3193284-3193340:-1:exon

position:3193284:-1
position: 3193284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3192820-3193016:-1:exon

position:3192820:-1
position: 3192820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3193016:-1
position: 3193016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3192539-3192651:-1:exon

position:3192651:-1
position: 3192651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117468379
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117468379
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3334565..3335222)
location: region:3334565-3335222:-1
so has part: feature:3334565-3335222:-1:exon
subclass of: SO_0000011

117468379
type: Gene
SIO_000068: ncbigene

position:3334565:-1
position: 3334565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3335222:-1
position: 3335222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3334565-3335222:-1:exon

LOC117468379
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117468379
product: uncharacterized LOC117468379
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_004554479.1
SIO_010081: LOC117468379
subclass of: SO_0000673
so part of: LOC117468379
location: complement(join(3334565..3334632,3334948..3335019,3335165..3335222))
location: region:3334565-3335222:-1
so has part: feature:3335165-3335222:-1:exon
so has part: feature:3334948-3335019:-1:exon
so has part: feature:3334565-3334632:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3335165-3335222:-1:exon

position:3335165:-1
position: 3335165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3334948-3335019:-1:exon

position:3334948:-1
position: 3334948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3335019:-1
position: 3335019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3334565-3334632:-1:exon

position:3334632:-1
position: 3334632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117468378
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117468378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3335224..3336588)
location: region:3335224-3336588:-1
so has part: feature:3335224-3336588:-1:exon
subclass of: SO_0000011

117468378
type: Gene
SIO_000068: ncbigene

position:3335224:-1
position: 3335224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3336588:-1
position: 3336588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3335224-3336588:-1:exon

LOC117468378
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117468378
product: uncharacterized LOC117468378
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004554478.1
SIO_010081: LOC117468378
subclass of: SO_0000673
so part of: LOC117468378
location: complement(join(3335224..3335239,3335342..3335422,3335793..3335847,3336510..3336588))
location: region:3335224-3336588:-1
so has part: feature:3336510-3336588:-1:exon
so has part: feature:3335793-3335847:-1:exon
so has part: feature:3335342-3335422:-1:exon
so has part: feature:3335224-3335239:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3336510-3336588:-1:exon

position:3336510:-1
position: 3336510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3335793-3335847:-1:exon

position:3335793:-1
position: 3335793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3335847:-1
position: 3335847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3335342-3335422:-1:exon

position:3335342:-1
position: 3335342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3335422:-1
position: 3335422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3335224-3335239:-1:exon

position:3335239:-1
position: 3335239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117468402
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117468402
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3814196..3815283
location: region:3814196-3815283:1
so has part: feature:3814196-3815283:1:exon

117468402
type: Gene
SIO_000068: ncbigene

position:3814196:1
position: 3814196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3815283:1
position: 3815283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3814196-3815283:1:exon

LOC117468402
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117468402
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117468402
subclass of: SO_0000673
so part of: LOC117468402
location: 3814196..3814312
location: region:3814196-3814312:1
so has part: feature:3814196-3814312:1:exon

position:3814312:1
position: 3814312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3814196-3814312:1:exon

LOC117468402
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117468402
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117468402
subclass of: SO_0000673
so part of: LOC117468402
location: 3814508..3815283
location: region:3814508-3815283:1
so has part: feature:3814508-3815283:1:exon

position:3814508:1
position: 3814508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3814508-3815283:1:exon

LOC117439215
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3905994..3972893
location: region:3905994-3972893:1
so has part: feature:3905994-3972893:1:exon
subclass of: SO_0000010

117439215
type: Gene
SIO_000068: ncbigene

position:3905994:1
position: 3905994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3972893:1
position: 3972893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3905994-3972893:1:exon

LOC117439215
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439215
product: protein shisa-6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034075019.1
SIO_010081: LOC117439215
subclass of: SO_0000673
so part of: LOC117439215
location: join(3905994..3906096,3906462..3907340,3908437..3908597,3915699..3915800,3960058..3960120,3964541..3964561,3969565..3969668,3970871..3972893)
location: region:3905994-3972893:1
so has part: feature:3905994-3906096:1:exon
so has part: feature:3906462-3907340:1:exon
so has part: feature:3908437-3908597:1:exon
so has part: feature:3915699-3915800:1:exon
so has part: feature:3960058-3960120:1:exon
so has part: feature:3964541-3964561:1:exon
so has part: feature:3969565-3969668:1:exon
so has part: feature:3970871-3972893:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3905994-3906096:1:exon

position:3906096:1
position: 3906096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3906462-3907340:1:exon

position:3906462:1
position: 3906462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3907340:1
position: 3907340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3908437-3908597:1:exon

position:3908437:1
position: 3908437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3908597:1
position: 3908597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3915699-3915800:1:exon

position:3915699:1
position: 3915699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3915800:1
position: 3915800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3960058-3960120:1:exon

position:3960058:1
position: 3960058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3960120:1
position: 3960120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3964541-3964561:1:exon

position:3964541:1
position: 3964541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3964561:1
position: 3964561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3969565-3969668:1:exon

position:3969565:1
position: 3969565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3969668:1
position: 3969668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3970871-3972893:1:exon

position:3970871:1
position: 3970871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117439215
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439215
product: protein shisa-6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034075020.1
SIO_010081: LOC117439215
subclass of: SO_0000673
so part of: LOC117439215
location: join(3905994..3906096,3906462..3907340,3908437..3908597,3915699..3915800,3960058..3960120,3969565..3969668,3970871..3972893)
location: region:3905994-3972893:1
so has part: feature:3905994-3906096:1:exon
so has part: feature:3906462-3907340:1:exon
so has part: feature:3908437-3908597:1:exon
so has part: feature:3915699-3915800:1:exon
so has part: feature:3960058-3960120:1:exon
so has part: feature:3969565-3969668:1:exon
so has part: feature:3970871-3972893:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3905994-3906096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3906462-3907340:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3908437-3908597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3915699-3915800:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3960058-3960120:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3969565-3969668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3970871-3972893:1:exon

LOC117439215
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439215
product: protein shisa-6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034075021.1
SIO_010081: LOC117439215
subclass of: SO_0000673
so part of: LOC117439215
location: join(3905994..3906096,3906462..3907340,3908437..3908597,3915699..3915800,3969565..3969668,3970871..3972893)
location: region:3905994-3972893:1
so has part: feature:3905994-3906096:1:exon
so has part: feature:3906462-3907340:1:exon
so has part: feature:3908437-3908597:1:exon
so has part: feature:3915699-3915800:1:exon
so has part: feature:3969565-3969668:1:exon
so has part: feature:3970871-3972893:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3905994-3906096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3906462-3907340:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3908437-3908597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3915699-3915800:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3969565-3969668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3970871-3972893:1:exon

LOC117439215
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439215
product: protein shisa-6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034075022.1
SIO_010081: LOC117439215
subclass of: SO_0000673
so part of: LOC117439215
location: join(3905994..3906096,3906462..3907340,3908437..3908597,3960058..3960120,3964541..3964561,3969565..3969668,3970871..3972893)
location: region:3905994-3972893:1
so has part: feature:3905994-3906096:1:exon
so has part: feature:3906462-3907340:1:exon
so has part: feature:3908437-3908597:1:exon
so has part: feature:3960058-3960120:1:exon
so has part: feature:3964541-3964561:1:exon
so has part: feature:3969565-3969668:1:exon
so has part: feature:3970871-3972893:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3905994-3906096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3906462-3907340:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3908437-3908597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3960058-3960120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3964541-3964561:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3969565-3969668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3970871-3972893:1:exon

LOC117439215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein shisa-6 isoform X1
translation: MGIRHIVLLLIYLDPLCALGAATGGKKTKQPPPRKPPKATEVPTAVPLNTLPPAPASNHDTCLGYYDVSGQYDKMFECNNTNHRYCCGTCYLRFCCEYKKDRLDQKACKNYQTPKWVQTVVPSPIPTGETYDPSMDQTNTAVYITCGVIAFIIVLGLSVKVAYDKATEPPQEMNIHRALADILRQQGPIPISQYDCENFAAMNGSPKDNTPVRTSSKNHYTPVHSSKSSHGLHYGKESSLSSGGADLHNFVSSGSVTLGRGHQKGTHQHNYNHVALCSPTRTPKNAHRSLRHADKEVDDYYTRKRHLPDLAARGTLPLHVLKLTHEQHRDQQLQSQPLQSSQAPPQSQSSQPQSQQRQRPRRVQRAMSQDRVLSPQRAQEQEYNISSNGMSPYGGRILSDEHLLSAERLRSQERLLPQDRHTSQDRLYSNDRTYTKDRLLSQDHIYSKDRHYSQERLYSQDRLYSQDRLLSQDPLLSPERLMRSLKRGMVSSVSGGFRGSDKSMSRAISHTDVFVPTTPLMDHYKMTKMHSHPSASNNGSGVGVGAGAGGTGHSNTLAMNQTATKRQAFASRRTHTMEQLHYIPPHHQQQPQPHHYRTGSKTEVTV
SIO_010081: LOC117439215
subclass of: SO_0000673
so part of: LOC117439215
location: join(3906811..3907340,3908437..3908597,3915699..3915800,3960058..3960120,3964541..3964561,3969565..3969668,3970871..3971710)
location: region:3906811-3971710:1
so has part: feature:3906811-3907340:1:exon
so has part: feature:3908437-3908597:1:exon
so has part: feature:3915699-3915800:1:exon
so has part: feature:3960058-3960120:1:exon
so has part: feature:3964541-3964561:1:exon
so has part: feature:3969565-3969668:1:exon
so has part: feature:3970871-3971710:1:exon

XP_033930910.1
type: Protein
SIO_000068: ncbiprotein

position:3906811:1
position: 3906811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3971710:1
position: 3971710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3906811-3907340:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3908437-3908597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3915699-3915800:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3960058-3960120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3964541-3964561:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3969565-3969668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3970871-3971710:1:exon

LOC117439215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein shisa-6 isoform X2
translation: MGIRHIVLLLIYLDPLCALGAATGGKKTKQPPPRKPPKATEVPTAVPLNTLPPAPASNHDTCLGYYDVSGQYDKMFECNNTNHRYCCGTCYLRFCCEYKKDRLDQKACKNYQTPKWVQTVVPSPIPTGETYDPSMDQTNTAVYITCGVIAFIIVLGLSVKVAYDKATEPPQEMNIHRALADILRQQGPIPISQYDCENFAAMNGSPKDNTPVRTSSKNHYTPVHSSKSSHGLHYGKESSLSSGGADLHNFVSSGSVTLGRGHQKGTHQHNYNHVALCSPTRTPKNADKEVDDYYTRKRHLPDLAARGTLPLHVLKLTHEQHRDQQLQSQPLQSSQAPPQSQSSQPQSQQRQRPRRVQRAMSQDRVLSPQRAQEQEYNISSNGMSPYGGRILSDEHLLSAERLRSQERLLPQDRHTSQDRLYSNDRTYTKDRLLSQDHIYSKDRHYSQERLYSQDRLYSQDRLLSQDPLLSPERLMRSLKRGMVSSVSGGFRGSDKSMSRAISHTDVFVPTTPLMDHYKMTKMHSHPSASNNGSGVGVGAGAGGTGHSNTLAMNQTATKRQAFASRRTHTMEQLHYIPPHHQQQPQPHHYRTGSKTEVTV
SIO_010081: LOC117439215
subclass of: SO_0000673
so part of: LOC117439215
location: join(3906811..3907340,3908437..3908597,3915699..3915800,3960058..3960120,3969565..3969668,3970871..3971710)
location: region:3906811-3971710:1
so has part: feature:3906811-3907340:1:exon
so has part: feature:3908437-3908597:1:exon
so has part: feature:3915699-3915800:1:exon
so has part: feature:3960058-3960120:1:exon
so has part: feature:3969565-3969668:1:exon
so has part: feature:3970871-3971710:1:exon

XP_033930911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3906811-3907340:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3908437-3908597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3915699-3915800:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3960058-3960120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3969565-3969668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3970871-3971710:1:exon

LOC117439215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein shisa-6 isoform X3
translation: MGIRHIVLLLIYLDPLCALGAATGGKKTKQPPPRKPPKATEVPTAVPLNTLPPAPASNHDTCLGYYDVSGQYDKMFECNNTNHRYCCGTCYLRFCCEYKKDRLDQKACKNYQTPKWVQTVVPSPIPTGETYDPSMDQTNTAVYITCGVIAFIIVLGLSVKVAYDKATEPPQEMNIHRALADILRQQGPIPISQYDCENFAAMNGSPKDNTPVRTSSKNHYTPVHSSKSSHGLHYGKESSLSSGGADLHNFVSSGSVTLGRGHQKADKEVDDYYTRKRHLPDLAARGTLPLHVLKLTHEQHRDQQLQSQPLQSSQAPPQSQSSQPQSQQRQRPRRVQRAMSQDRVLSPQRAQEQEYNISSNGMSPYGGRILSDEHLLSAERLRSQERLLPQDRHTSQDRLYSNDRTYTKDRLLSQDHIYSKDRHYSQERLYSQDRLYSQDRLLSQDPLLSPERLMRSLKRGMVSSVSGGFRGSDKSMSRAISHTDVFVPTTPLMDHYKMTKMHSHPSASNNGSGVGVGAGAGGTGHSNTLAMNQTATKRQAFASRRTHTMEQLHYIPPHHQQQPQPHHYRTGSKTEVTV
SIO_010081: LOC117439215
subclass of: SO_0000673
so part of: LOC117439215
location: join(3906811..3907340,3908437..3908597,3915699..3915800,3969565..3969668,3970871..3971710)
location: region:3906811-3971710:1
so has part: feature:3906811-3907340:1:exon
so has part: feature:3908437-3908597:1:exon
so has part: feature:3915699-3915800:1:exon
so has part: feature:3969565-3969668:1:exon
so has part: feature:3970871-3971710:1:exon

XP_033930912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3906811-3907340:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3908437-3908597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3915699-3915800:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3969565-3969668:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3970871-3971710:1:exon

LOC117439215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein shisa-6 isoform X4
translation: MGIRHIVLLLIYLDPLCALGAATGGKKTKQPPPRKPPKATEVPTAVPLNTLPPAPASNHDTCLGYYDVSGQYDKMFECNNTNHRYCCGTCYLRFCCEYKKDRLDQKACKNYQTPKWVQTVVPSPIPTGETYDPSMDQTNTAVYITCGVIAFIIVLGLSVKVAYDKATEPPQEMNIHRALADILRQQGPIPISQYDCENFAAMNGSPKDNTPVRTSSKNHYTPVHSSKSSHGTHQHNYNHVALCSPTRTPKNAHRSLRHADKEVDDYYTRKRHLPDLAARGTLPLHVLKLTHEQHRDQQLQSQPLQSSQAPPQSQSSQPQSQQRQRPRRVQRAMSQDRVLSPQRAQEQEYNISSNGMSPYGGRILSDEHLLSAERLRSQERLLPQDRHTSQDRLYSNDRTYTKDRLLSQDHIYSKDRHYSQERLYSQDRLYSQDRLLSQDPLLSPERLMRSLKRGMVSSVSGGFRGSDKSMSRAISHTDVFVPTTPLMDHYKMTKMHSHPSASNNGSGVGVGAGAGGTGHSNTLAMNQTATKRQAFASRRTHTMEQLHYIPPHHQQQPQPHHYRTGSKTEVTV
SIO_010081: LOC117439215
subclass of: SO_0000673
so part of: LOC117439215
location: join(3906811..3907340,3908437..3908597,3960058..3960120,3964541..3964561,3969565..3969668,3970871..3971710)
location: region:3906811-3971710:1
so has part: feature:3906811-3907340:1:exon
so has part: feature:3908437-3908597:1:exon
so has part: feature:3960058-3960120:1:exon
so has part: feature:3964541-3964561:1:exon
so has part: feature:3969565-3969668:1:exon
so has part: feature:3970871-3971710:1:exon

XP_033930913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3906811-3907340:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3908437-3908597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3960058-3960120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3964541-3964561:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3969565-3969668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3970871-3971710:1:exon

wdr45b
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: wdr45b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4050086..4067950
location: region:4050086-4067950:1
so has part: feature:4050086-4067950:1:exon
subclass of: SO_0000010

117439226
type: Gene
SIO_000068: ncbigene

position:4050086:1
position: 4050086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4067950:1
position: 4067950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4050086-4067950:1:exon

wdr45b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: wdr45b
product: WD repeat domain 45B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_034075034.1
SIO_010081: wdr45b
subclass of: SO_0000673
so part of: wdr45b
location: join(4050086..4050297,4051283..4051357,4052322..4052423,4053060..4053147,4053314..4053408,4053505..4053695,4053790..4053875,4058972..4059073,4065834..4065955,4067014..4067950)
location: region:4050086-4067950:1
so has part: feature:4050086-4050297:1:exon
so has part: feature:4051283-4051357:1:exon
so has part: feature:4052322-4052423:1:exon
so has part: feature:4053060-4053147:1:exon
so has part: feature:4053314-4053408:1:exon
so has part: feature:4053505-4053695:1:exon
so has part: feature:4053790-4053875:1:exon
so has part: feature:4058972-4059073:1:exon
so has part: feature:4065834-4065955:1:exon
so has part: feature:4067014-4067950:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4050086-4050297:1:exon

position:4050297:1
position: 4050297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4051283-4051357:1:exon

position:4051283:1
position: 4051283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4051357:1
position: 4051357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4052322-4052423:1:exon

position:4052322:1
position: 4052322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4052423:1
position: 4052423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4053060-4053147:1:exon

position:4053060:1
position: 4053060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4053147:1
position: 4053147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4053314-4053408:1:exon

position:4053314:1
position: 4053314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4053408:1
position: 4053408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4053505-4053695:1:exon

position:4053505:1
position: 4053505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4053695:1
position: 4053695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4053790-4053875:1:exon

position:4053790:1
position: 4053790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4053875:1
position: 4053875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4058972-4059073:1:exon

position:4058972:1
position: 4058972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4059073:1
position: 4059073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4065834-4065955:1:exon

position:4065834:1
position: 4065834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4065955:1
position: 4065955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4067014-4067950:1:exon

position:4067014:1
position: 4067014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

wdr45b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: wdr45b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat domain phosphoinositide-interacting protein 3
translation: MNLLPSNPHGNGLLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVGHVEMLFRCNYLALVGGGKKPKYPTNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGTHSGHVQIVDLANTEKPPVDIPAHEGALCCIALNLQGTRIATASEKGTLIRIFDTSAGQLIQELRRGSQAANIYCINFNQDASLICVSSDHGTVHIFAAEDPKRNKQSSLASASFLPKYFSSKWSFSKFQVPSGSPCVCAFGTEPNAVMAICADGSYYKFLFNQKGECSRDVYAQFLEMTDEKI
SIO_010081: wdr45b
subclass of: SO_0000673
so part of: wdr45b
location: join(4050231..4050297,4051283..4051357,4052322..4052423,4053060..4053147,4053314..4053408,4053505..4053695,4053790..4053875,4058972..4059073,4065834..4065955,4067014..4067120)
location: region:4050231-4067120:1
so has part: feature:4050231-4050297:1:exon
so has part: feature:4051283-4051357:1:exon
so has part: feature:4052322-4052423:1:exon
so has part: feature:4053060-4053147:1:exon
so has part: feature:4053314-4053408:1:exon
so has part: feature:4053505-4053695:1:exon
so has part: feature:4053790-4053875:1:exon
so has part: feature:4058972-4059073:1:exon
so has part: feature:4065834-4065955:1:exon
so has part: feature:4067014-4067120:1:exon

XP_033930925.1
type: Protein
SIO_000068: ncbiprotein

position:4050231:1
position: 4050231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4067120:1
position: 4067120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4050231-4050297:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4051283-4051357:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4052322-4052423:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4053060-4053147:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4053314-4053408:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4053505-4053695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4053790-4053875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4058972-4059073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4065834-4065955:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4067014-4067120:1:exon

LOC117439060
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4071783..4072844)
location: region:4071783-4072844:-1
so has part: feature:4071783-4072844:-1:exon

117439060
type: Gene
SIO_000068: ncbigene

position:4071783:-1
position: 4071783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4072844:-1
position: 4072844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4071783-4072844:-1:exon

LOC117439060
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439060
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117439060
subclass of: SO_0000673
so part of: LOC117439060
location: complement(4071783..4072532)
location: region:4071783-4072532:-1
so has part: feature:4071783-4072532:-1:exon

position:4072532:-1
position: 4072532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4071783-4072532:-1:exon

LOC117439060
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439060
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117439060
subclass of: SO_0000673
so part of: LOC117439060
location: complement(4072728..4072844)
location: region:4072728-4072844:-1
so has part: feature:4072728-4072844:-1:exon

position:4072728:-1
position: 4072728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4072728-4072844:-1:exon

trnar-ccu
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: trnar-ccu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 4079328..4079400
location: region:4079328-4079400:1
so has part: feature:4079328-4079400:1:exon
subclass of: SO_0000663

117439395
type: Gene
SIO_000068: ncbigene

position:4079328:1
position: 4079328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4079400:1
position: 4079400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4079328-4079400:1:exon

trnar-ccu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 52239
gene: trnar-ccu
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon CCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:4079361..4079363,aa:Arg,seq:cct)
SIO_010081: trnar-ccu
subclass of: SO_0000673
so part of: trnar-ccu
location: 4079328..4079400
location: region:4079328-4079400:1
so has part: feature:4079328-4079400:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4079328-4079400:1:exon

LOC117439086
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4106802..4132022)
location: region:4106802-4132022:-1
so has part: feature:4106802-4132022:-1:exon
subclass of: SO_0000010

117439086
type: Gene
SIO_000068: ncbigene

position:4106802:-1
position: 4106802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4132022:-1
position: 4132022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4106802-4132022:-1:exon

LOC117439086
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439086
product: zinc finger protein 345-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034074819.1
SIO_010081: LOC117439086
subclass of: SO_0000673
so part of: LOC117439086
location: complement(join(4106802..4109146,4109254..4109377,4109659..4109769,4109932..4110021,4112334..4112435,4131844..4132022))
location: region:4106802-4132022:-1
so has part: feature:4131844-4132022:-1:exon
so has part: feature:4112334-4112435:-1:exon
so has part: feature:4109932-4110021:-1:exon
so has part: feature:4109659-4109769:-1:exon
so has part: feature:4109254-4109377:-1:exon
so has part: feature:4106802-4109146:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4131844-4132022:-1:exon

position:4131844:-1
position: 4131844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4112334-4112435:-1:exon

position:4112334:-1
position: 4112334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4112435:-1
position: 4112435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4109932-4110021:-1:exon

position:4109932:-1
position: 4109932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4110021:-1
position: 4110021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4109659-4109769:-1:exon

position:4109659:-1
position: 4109659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4109769:-1
position: 4109769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4109254-4109377:-1:exon

position:4109254:-1
position: 4109254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4109377:-1
position: 4109377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4106802-4109146:-1:exon

position:4109146:-1
position: 4109146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439086
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439086
product: zinc finger protein 345-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_034074818.1
SIO_010081: LOC117439086
subclass of: SO_0000673
so part of: LOC117439086
location: complement(join(4106802..4109146,4109254..4109377,4109659..4109769,4109932..4110021,4112334..4112435,4115584..4115786,4131844..4132022))
location: region:4106802-4132022:-1
so has part: feature:4131844-4132022:-1:exon
so has part: feature:4115584-4115786:-1:exon
so has part: feature:4112334-4112435:-1:exon
so has part: feature:4109932-4110021:-1:exon
so has part: feature:4109659-4109769:-1:exon
so has part: feature:4109254-4109377:-1:exon
so has part: feature:4106802-4109146:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4131844-4132022:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4115584-4115786:-1:exon

position:4115584:-1
position: 4115584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4115786:-1
position: 4115786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4112334-4112435:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4109932-4110021:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4109659-4109769:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4109254-4109377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4106802-4109146:-1:exon

LOC117439086
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 135-like isoform X1
translation: MDGGVSGPSLPLSTLRLLIPPIRLVSAAIWLTVEQKIVSDYGLLEEFVFMVTEIVPQLLSTRQRAELILGLRARLILELCRSEETADPQIIQPHLDRMQSLRTLWNVETDNADISDSHFMGLVQNLVRNPEDRRNFFQDVFPGDFGPTYDKAIQTLMWLFLSRLEKLLPTQTLQQIASLLSDASSVLNECMDTFAQPQELKSLLDTQKDLGQLEDIESCIVDSGILSALCLPPVERVVIVNEQTETDVESGLMYTVSQEMEVESESMEGTVNSECVQTQWFGLGSEVKAEMDSVVVTDRLDGTEASESEMAEEPSGTLMIGEDGQVTVLNSVEKKPNRRGRKKKCPEDKDFQVQTKMRGKLDPEFEVLLERPVRKNRGLKMKRYLSQWRKSGKTQGSNATNSSPKRFATKSNDLDERTCKVCGKVVTRAKFLERHMNRHSDELPFSCPVCKRFYKSLRYLQQHKCPNQTKAKEQETAADEGEQSSSGLPGEAANQELSSDNTGQAEQKSPDVNKSVLEGPFYCPHCSVEFKCKQTFRFHLRNICYNEQQVDPEQPEDVKHCFRCDECDKAFKYKSTLDSHKQTHNPLYCEVCMKLVRDPEALAMHKESHTPFQCNQCVEHFPVFKALHKHYIDVHNPIEPFTCTHCQTTFASLKRFIRHEWKHTGYQPFQCPHCTKRFRSYSDLVEHQKKHTKAYPFLCWECGKKFRHGVTLTRHVERVHHSGEPVTEKPMPIFTCAQCGKTFTSRRCLLKHDNFHHKGLRFPCEHCGKGFFGKDALVRHTLIHTGERPFKCDDCDKSFRSAAELKIHRRYHTGERPFKCNVCEKGFVQSCFLTLHMRTHTGERPYVCAVCNKGFSSLHGLKRHRRLVHA
SIO_010081: LOC117439086
subclass of: SO_0000673
so part of: LOC117439086
location: complement(join(4107183..4109146,4109254..4109377,4109659..4109769,4109932..4110021,4112334..4112435,4115584..4115786,4131844..4131862))
location: region:4107183-4131862:-1
so has part: feature:4131844-4131862:-1:exon
so has part: feature:4115584-4115786:-1:exon
so has part: feature:4112334-4112435:-1:exon
so has part: feature:4109932-4110021:-1:exon
so has part: feature:4109659-4109769:-1:exon
so has part: feature:4109254-4109377:-1:exon
so has part: feature:4107183-4109146:-1:exon

XP_033930709.1
type: Protein
SIO_000068: ncbiprotein

position:4107183:-1
position: 4107183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4131862:-1
position: 4131862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4131844-4131862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4115584-4115786:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4112334-4112435:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4109932-4110021:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4109659-4109769:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4109254-4109377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4107183-4109146:-1:exon

LOC117439086
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 345-like isoform X2
translation: MQSLRTLWNVETDNADISDSHFMGLVQNLVRNPEDRRNFFQDVFPGDFGPTYDKAIQTLMWLFLSRLEKLLPTQTLQQIASLLSDASSVLNECMDTFAQPQELKSLLDTQKDLGQLEDIESCIVDSGILSALCLPPVERVVIVNEQTETDVESGLMYTVSQEMEVESESMEGTVNSECVQTQWFGLGSEVKAEMDSVVVTDRLDGTEASESEMAEEPSGTLMIGEDGQVTVLNSVEKKPNRRGRKKKCPEDKDFQVQTKMRGKLDPEFEVLLERPVRKNRGLKMKRYLSQWRKSGKTQGSNATNSSPKRFATKSNDLDERTCKVCGKVVTRAKFLERHMNRHSDELPFSCPVCKRFYKSLRYLQQHKCPNQTKAKEQETAADEGEQSSSGLPGEAANQELSSDNTGQAEQKSPDVNKSVLEGPFYCPHCSVEFKCKQTFRFHLRNICYNEQQVDPEQPEDVKHCFRCDECDKAFKYKSTLDSHKQTHNPLYCEVCMKLVRDPEALAMHKESHTPFQCNQCVEHFPVFKALHKHYIDVHNPIEPFTCTHCQTTFASLKRFIRHEWKHTGYQPFQCPHCTKRFRSYSDLVEHQKKHTKAYPFLCWECGKKFRHGVTLTRHVERVHHSGEPVTEKPMPIFTCAQCGKTFTSRRCLLKHDNFHHKGLRFPCEHCGKGFFGKDALVRHTLIHTGERPFKCDDCDKSFRSAAELKIHRRYHTGERPFKCNVCEKGFVQSCFLTLHMRTHTGERPYVCAVCNKGFSSLHGLKRHRRLVHA
SIO_010081: LOC117439086
subclass of: SO_0000673
so part of: LOC117439086
location: complement(join(4107183..4109146,4109254..4109377,4109659..4109769,4109932..4110021,4112334..4112366))
location: region:4107183-4112366:-1
so has part: feature:4112334-4112366:-1:exon
so has part: feature:4109932-4110021:-1:exon
so has part: feature:4109659-4109769:-1:exon
so has part: feature:4109254-4109377:-1:exon
so has part: feature:4107183-4109146:-1:exon

XP_033930710.1
type: Protein
SIO_000068: ncbiprotein

position:4112366:-1
position: 4112366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4112334-4112366:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4109932-4110021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4109659-4109769:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4109254-4109377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4107183-4109146:-1:exon

LOC117439369
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4173007..4187865)
location: region:4173007-4187865:-1
so has part: feature:4173007-4187865:-1:exon
subclass of: SO_0000010

117439369
type: Gene
SIO_000068: ncbigene

position:4173007:-1
position: 4173007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4187865:-1
position: 4187865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4173007-4187865:-1:exon

LOC117439369
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439369
product: zinc finger protein 792-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034075281.1
SIO_010081: LOC117439369
subclass of: SO_0000673
so part of: LOC117439369
location: complement(join(4173007..4173043,4185930..4186053,4186145..4186255,4186476..4186571,4186680..4186781,4186890..4187092,4187736..4187865))
location: region:4173007-4187865:-1
so has part: feature:4187736-4187865:-1:exon
so has part: feature:4186890-4187092:-1:exon
so has part: feature:4186680-4186781:-1:exon
so has part: feature:4186476-4186571:-1:exon
so has part: feature:4186145-4186255:-1:exon
so has part: feature:4185930-4186053:-1:exon
so has part: feature:4173007-4173043:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4187736-4187865:-1:exon

position:4187736:-1
position: 4187736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4186890-4187092:-1:exon

position:4186890:-1
position: 4186890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4187092:-1
position: 4187092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4186680-4186781:-1:exon

position:4186680:-1
position: 4186680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4186781:-1
position: 4186781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4186476-4186571:-1:exon

position:4186476:-1
position: 4186476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4186571:-1
position: 4186571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4186145-4186255:-1:exon

position:4186145:-1
position: 4186145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4186255:-1
position: 4186255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4185930-4186053:-1:exon

position:4185930:-1
position: 4185930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4186053:-1
position: 4186053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4173007-4173043:-1:exon

position:4173043:-1
position: 4173043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439369
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117439369 isoform X2
translation: MEGPVSEGSPPLPLSTLRLLVPPVRLLSAAIWQTLQHKTVADYGMLEEFVSMVTDIIPELLSTHQRTQLLLGLRAQLVLGLCHFEATADLELVQPHLDRVQMLMDAWPMDAGAANTVEPHATFVDLIKSLLKNADEREHFYRKVLPEQFGPTYDDILETLMWTFLSRLEQVLPLLTFQQVASTFGDVSSVLGECMDSVSQCEGLHTLLQHHTDLSLLDHNAQLILD
SIO_010081: LOC117439369
subclass of: SO_0000673
so part of: LOC117439369
location: complement(join(4173024..4173043,4185930..4186053,4186145..4186255,4186476..4186571,4186680..4186781,4186890..4187092,4187736..4187760))
location: region:4173024-4187760:-1
so has part: feature:4187736-4187760:-1:exon
so has part: feature:4186890-4187092:-1:exon
so has part: feature:4186680-4186781:-1:exon
so has part: feature:4186476-4186571:-1:exon
so has part: feature:4186145-4186255:-1:exon
so has part: feature:4185930-4186053:-1:exon
so has part: feature:4173024-4173043:-1:exon

XP_033931172.1
type: Protein
SIO_000068: ncbiprotein

position:4173024:-1
position: 4173024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4187760:-1
position: 4187760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4187736-4187760:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4186890-4187092:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4186680-4186781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4186476-4186571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4186145-4186255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4185930-4186053:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4173024-4173043:-1:exon

LOC117439369
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439369
product: zinc finger protein 792-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034075280.1
SIO_010081: LOC117439369
subclass of: SO_0000673
so part of: LOC117439369
location: complement(join(4182621..4184805,4185930..4186053,4186145..4186255,4186476..4186571,4186680..4186781,4186890..4187092,4187736..4187865))
location: region:4182621-4187865:-1
so has part: feature:4187736-4187865:-1:exon
so has part: feature:4186890-4187092:-1:exon
so has part: feature:4186680-4186781:-1:exon
so has part: feature:4186476-4186571:-1:exon
so has part: feature:4186145-4186255:-1:exon
so has part: feature:4185930-4186053:-1:exon
so has part: feature:4182621-4184805:-1:exon

position:4182621:-1
position: 4182621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4187736-4187865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4186890-4187092:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4186680-4186781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4186476-4186571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4186145-4186255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4185930-4186053:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4182621-4184805:-1:exon

position:4184805:-1
position: 4184805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439369
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 792-like isoform X1
translation: MEGPVSEGSPPLPLSTLRLLVPPVRLLSAAIWQTLQHKTVADYGMLEEFVSMVTDIIPELLSTHQRTQLLLGLRAQLVLGLCHFEATADLELVQPHLDRVQMLMDAWPMDAGAANTVEPHATFVDLIKSLLKNADEREHFYRKVLPEQFGPTYDDILETLMWTFLSRLEQVLPLLTFQQVASTFGDVSSVLGECMDSVSQCEGLHTLLQHHTDLSLLDHNDISLEDARVISVLEIPAPQRSETDEPQADILDSVTLSDSTVSHTTQREINATTEDRTRELQVDESSWTLGDNETEVLLGHFTRHEETVGLLQSQVKDGPLLLKRCSVLLKRLDMPMQSRPVRGTGEKRPPAYKSASRKTKPSDNMEAGILSNSLYMAPINHCSDDDSWSYYSDQDLGLKTPSSSVSETGSWSNYSGEGSSFGTPVSRPIDGDSLSSCSNEDTSFMGAKNILSTSKNQGTSDIKASITKKTREVQCFICQDLVNTSLRAHMKSHFPLGEYACPQCDSRFKLYSSFRQHFNRTCFEYGQQQFDLQKPEEVMNLYKCDGCEEAFRYKVSLNRHKHTHNELYCSVCRKVLRDAATLARHKASHTPFQCNRCEQTFTLFKPLSRHCENIHQISRPFKCSYCPKVVSKLRVLITHEWKHTGHLPFQCAQCGLRYKTDGDLTSHQRVHTREKPYLCAECGKTFSQKSNLLRHLNLIHSESRNEKKYSCPECEKSFKEKGALKKHQRTKHFNELFRHPCPYCGKMVSSSTIARHKLIHTGERPFKCTVPECDKYFRSTPEVKKHVLIHHTTERPYTCDTCGKGFIRKCFLNTHAKTHSGEKPFVCHICGKAFPKHYSMQRHKKLVHTFVTH
SIO_010081: LOC117439369
subclass of: SO_0000673
so part of: LOC117439369
location: complement(join(4182905..4184805,4185930..4186053,4186145..4186255,4186476..4186571,4186680..4186781,4186890..4187092,4187736..4187760))
location: region:4182905-4187760:-1
so has part: feature:4187736-4187760:-1:exon
so has part: feature:4186890-4187092:-1:exon
so has part: feature:4186680-4186781:-1:exon
so has part: feature:4186476-4186571:-1:exon
so has part: feature:4186145-4186255:-1:exon
so has part: feature:4185930-4186053:-1:exon
so has part: feature:4182905-4184805:-1:exon

XP_033931171.1
type: Protein
SIO_000068: ncbiprotein

position:4182905:-1
position: 4182905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4187736-4187760:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4186890-4187092:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4186680-4186781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4186476-4186571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4186145-4186255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4185930-4186053:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4182905-4184805:-1:exon

LOC117439300
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439300
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4195259..4196622)
location: region:4195259-4196622:-1
so has part: feature:4195259-4196622:-1:exon
subclass of: SO_0000011

117439300
type: Gene
SIO_000068: ncbigene

position:4195259:-1
position: 4195259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4196622:-1
position: 4196622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4195259-4196622:-1:exon

LOC117439300
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117439300
product: uncharacterized LOC117439300
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004551140.1
SIO_010081: LOC117439300
subclass of: SO_0000673
so part of: LOC117439300
location: complement(join(4195259..4196315,4196407..4196493,4196573..4196622))
location: region:4195259-4196622:-1
so has part: feature:4196573-4196622:-1:exon
so has part: feature:4196407-4196493:-1:exon
so has part: feature:4195259-4196315:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4196573-4196622:-1:exon

position:4196573:-1
position: 4196573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4196407-4196493:-1:exon

position:4196407:-1
position: 4196407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4196493:-1
position: 4196493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4195259-4196315:-1:exon

position:4196315:-1
position: 4196315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439206
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4209328..4214767
location: region:4209328-4214767:1
so has part: feature:4209328-4214767:1:exon
subclass of: SO_0000010

117439206
type: Gene
SIO_000068: ncbigene

position:4209328:1
position: 4209328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4214767:1
position: 4214767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4209328-4214767:1:exon

LOC117439206
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439206
product: ER lumen protein-retaining receptor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_034075003.1
SIO_010081: LOC117439206
subclass of: SO_0000673
so part of: LOC117439206
location: join(4209328..4209918,4211750..4211850,4212023..4212181,4212881..4213133,4213602..4214767)
location: region:4209328-4214767:1
so has part: feature:4209328-4209918:1:exon
so has part: feature:4211750-4211850:1:exon
so has part: feature:4212023-4212181:1:exon
so has part: feature:4212881-4213133:1:exon
so has part: feature:4213602-4214767:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4209328-4209918:1:exon

position:4209918:1
position: 4209918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4211750-4211850:1:exon

position:4211750:1
position: 4211750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4211850:1
position: 4211850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4212023-4212181:1:exon

position:4212023:1
position: 4212023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4212181:1
position: 4212181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4212881-4213133:1:exon

position:4212881:1
position: 4212881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4213133:1
position: 4213133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4213602-4214767:1:exon

position:4213602:1
position: 4213602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117439206
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER lumen protein-retaining receptor 2
translation: MNVFRLTGDLSHLAAIIILLLKIWKTRSCAGISGKSQVLFALVFTSRYLDLLTSFISLYNTTMKVIYIGCAYATVYLIYMKFKATYDGNHDTFRVEFLVVPVGGLAFLVNHDFSPLEILWTFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLINWIWRFYFEGFFDMIAIVAGVVQTILYCDFFYLYVTKVLKGKKLSLPA
SIO_010081: LOC117439206
subclass of: SO_0000673
so part of: LOC117439206
location: join(4209828..4209918,4211750..4211850,4212023..4212181,4212881..4213133,4213602..4213636)
location: region:4209828-4213636:1
so has part: feature:4209828-4209918:1:exon
so has part: feature:4211750-4211850:1:exon
so has part: feature:4212023-4212181:1:exon
so has part: feature:4212881-4213133:1:exon
so has part: feature:4213602-4213636:1:exon

XP_033930894.1
type: Protein
SIO_000068: ncbiprotein

position:4209828:1
position: 4209828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4213636:1
position: 4213636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4209828-4209918:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4211750-4211850:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4212023-4212181:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4212881-4213133:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4213602-4213636:1:exon

mettl9
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: mettl9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4247986..4278538)
location: region:4247986-4278538:-1
so has part: feature:4247986-4278538:-1:exon
subclass of: SO_0000010

117439227
type: Gene
SIO_000068: ncbigene

position:4247986:-1
position: 4247986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4278538:-1
position: 4278538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4247986-4278538:-1:exon

mettl9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: mettl9
product: methyltransferase like 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_034075035.1
SIO_010081: mettl9
subclass of: SO_0000673
so part of: mettl9
location: complement(join(4247986..4248828,4248915..4249099,4253402..4253611,4253680..4253870,4278249..4278538))
location: region:4247986-4278538:-1
so has part: feature:4278249-4278538:-1:exon
so has part: feature:4253680-4253870:-1:exon
so has part: feature:4253402-4253611:-1:exon
so has part: feature:4248915-4249099:-1:exon
so has part: feature:4247986-4248828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4278249-4278538:-1:exon

position:4278249:-1
position: 4278249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4253680-4253870:-1:exon

position:4253680:-1
position: 4253680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4253870:-1
position: 4253870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4253402-4253611:-1:exon

position:4253402:-1
position: 4253402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4253611:-1
position: 4253611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4248915-4249099:-1:exon

position:4248915:-1
position: 4248915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4249099:-1
position: 4249099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4247986-4248828:-1:exon

position:4248828:-1
position: 4248828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mettl9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: mettl9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 9
translation: MCPLQLKTLLFGAWLLGYVFFLLSIRRMWTGKYVRSPLARSLFLNMVSEDEAAATETQEWYRCGPDLLGESVRPLFVQSHLDSDTKAFLKRSVDKSGWLFTQLYHSFVSTFLSPLVSRTSINGFLGRGSMFVFSPEQFQQLLRVGPEWRSDRLLDLGAGDGAVTGVMGAHFREVYATEVSPPMKWHLQRRNYKLLGIDEWQHTGFQYDVISCLNLLDRCEHPLHLLQEIRLSLVPSTGRLILAAVLPFQPYVEVGGKWQRPKEHIKVQGKTWEEQVTNLSSEVFRKAGFEVEAVTRLPYLCEGDMYNDYYILDDAVFVLKVSDNTSESA
SIO_010081: mettl9
subclass of: SO_0000673
so part of: mettl9
location: complement(join(4248602..4248828,4248915..4249099,4253402..4253611,4253680..4253870,4278249..4278425))
location: region:4248602-4278425:-1
so has part: feature:4278249-4278425:-1:exon
so has part: feature:4253680-4253870:-1:exon
so has part: feature:4253402-4253611:-1:exon
so has part: feature:4248915-4249099:-1:exon
so has part: feature:4248602-4248828:-1:exon

XP_033930926.1
type: Protein
SIO_000068: ncbiprotein

position:4248602:-1
position: 4248602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4278425:-1
position: 4278425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4278249-4278425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4253680-4253870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4253402-4253611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4248915-4249099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4248602-4248828:-1:exon

LOC117439370
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4311365..4328745
location: region:4311365-4328745:1
so has part: feature:4311365-4328745:1:exon

117439370
type: Gene
SIO_000068: ncbigene

position:4311365:1
position: 4311365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4328745:1
position: 4328745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4311365-4328745:1:exon

LOC117439370
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439370
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 11% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439370
subclass of: SO_0000673
so part of: LOC117439370
location: 4311365..4311380
location: region:4311365-4311380:1
so has part: feature:4311365-4311380:1:exon

position:4311380:1
position: 4311380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4311365-4311380:1:exon

LOC117439370
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439370
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 11% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439370
subclass of: SO_0000673
so part of: LOC117439370
location: 4312828..4312928
location: region:4312828-4312928:1
so has part: feature:4312828-4312928:1:exon

position:4312828:1
position: 4312828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4312928:1
position: 4312928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4312828-4312928:1:exon

LOC117439370
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439370
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 11% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439370
subclass of: SO_0000673
so part of: LOC117439370
location: 4313031..4313169
location: region:4313031-4313169:1
so has part: feature:4313031-4313169:1:exon

position:4313031:1
position: 4313031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4313169:1
position: 4313169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4313031-4313169:1:exon

LOC117439370
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439370
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 11% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439370
subclass of: SO_0000673
so part of: LOC117439370
location: 4316697..4316834
location: region:4316697-4316834:1
so has part: feature:4316697-4316834:1:exon

position:4316697:1
position: 4316697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4316834:1
position: 4316834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4316697-4316834:1:exon

LOC117439370
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439370
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 11% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439370
subclass of: SO_0000673
so part of: LOC117439370
location: 4324569..4325823
location: region:4324569-4325823:1
so has part: feature:4324569-4325823:1:exon

position:4324569:1
position: 4324569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4325823:1
position: 4325823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4324569-4325823:1:exon

LOC117439370
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439370
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 11% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439370
subclass of: SO_0000673
so part of: LOC117439370
location: 4326757..4326870
location: region:4326757-4326870:1
so has part: feature:4326757-4326870:1:exon

position:4326757:1
position: 4326757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4326870:1
position: 4326870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4326757-4326870:1:exon

LOC117439370
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439370
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 11% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117439370
subclass of: SO_0000673
so part of: LOC117439370
location: 4328583..4328745
location: region:4328583-4328745:1
so has part: feature:4328583-4328745:1:exon

position:4328583:1
position: 4328583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4328583-4328745:1:exon

LOC117439172
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4329611..4371924)
location: region:4329611-4371924:-1
so has part: feature:4329611-4371924:-1:exon
subclass of: SO_0000010

117439172
type: Gene
SIO_000068: ncbigene

position:4329611:-1
position: 4329611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4371924:-1
position: 4371924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4329611-4371924:-1:exon

LOC117439172
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439172
product: Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034074947.1
SIO_010081: LOC117439172
subclass of: SO_0000673
so part of: LOC117439172
location: complement(join(4329611..4330301,4331169..4331276,4331574..4331578,4334947..4334970,4335115..4335268,4342943..4343110,4371033..4371924))
location: region:4329611-4371924:-1
so has part: feature:4371033-4371924:-1:exon
so has part: feature:4342943-4343110:-1:exon
so has part: feature:4335115-4335268:-1:exon
so has part: feature:4334947-4334970:-1:exon
so has part: feature:4331574-4331578:-1:exon
so has part: feature:4331169-4331276:-1:exon
so has part: feature:4329611-4330301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4371033-4371924:-1:exon

position:4371033:-1
position: 4371033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4342943-4343110:-1:exon

position:4342943:-1
position: 4342943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4343110:-1
position: 4343110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4335115-4335268:-1:exon

position:4335115:-1
position: 4335115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4335268:-1
position: 4335268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4334947-4334970:-1:exon

position:4334947:-1
position: 4334947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4334970:-1
position: 4334970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4331574-4331578:-1:exon

position:4331574:-1
position: 4331574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4331578:-1
position: 4331578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4331169-4331276:-1:exon

position:4331169:-1
position: 4331169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4331276:-1
position: 4331276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4329611-4330301:-1:exon

position:4330301:-1
position: 4330301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439172
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like isoform X3
translation: MSKLRPRQCVLEKGSSGYGFHLHGEKGKTGQFIRLVEPDTPASAAGLLAGDLLAFVNGESVEGESHQQVVARIRATAEALELIVVDSETAELLKKQNLQCRKEFVTEGIPLPGGDSDSEHGDTQSNGTPRECTPAPPDNGDAASERSERLSVSSSTKERGGLRPRLCHMQKGSGGYGFNLHSEKSSPGQFIRAVDDSSPAQQAGLKPQDKILQVNGVSVKDMQHSEVVAAIKAGGEETSLLVVDAETEEFFKMCDVLPTEEHLSGALPEPKKREQVAAEVKPKVSVSSSASSASSNASLQEPGSSEPPPQLPAPADRLGLSLSLAQVKERARQKRSAKKAPTMDWSKRNELFGNL
SIO_010081: LOC117439172
subclass of: SO_0000673
so part of: LOC117439172
location: complement(join(4330164..4330301,4331169..4331276,4331574..4331578,4334947..4334970,4335115..4335268,4342943..4343110,4371033..4371503))
location: region:4330164-4371503:-1
so has part: feature:4371033-4371503:-1:exon
so has part: feature:4342943-4343110:-1:exon
so has part: feature:4335115-4335268:-1:exon
so has part: feature:4334947-4334970:-1:exon
so has part: feature:4331574-4331578:-1:exon
so has part: feature:4331169-4331276:-1:exon
so has part: feature:4330164-4330301:-1:exon

XP_033930838.1
type: Protein
SIO_000068: ncbiprotein

position:4330164:-1
position: 4330164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4371503:-1
position: 4371503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4371033-4371503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4342943-4343110:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4335115-4335268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4334947-4334970:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4331574-4331578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4331169-4331276:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4330164-4330301:-1:exon

LOC117439172
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439172
product: Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_034074945.1
SIO_010081: LOC117439172
subclass of: SO_0000673
so part of: LOC117439172
location: complement(join(4330197..4330301,4331169..4331276,4334935..4334970,4335115..4335268,4342943..4343110,4371033..4371923))
location: region:4330197-4371923:-1
so has part: feature:4371033-4371923:-1:exon
so has part: feature:4342943-4343110:-1:exon
so has part: feature:4335115-4335268:-1:exon
so has part: feature:4334935-4334970:-1:exon
so has part: feature:4331169-4331276:-1:exon
so has part: feature:4330197-4330301:-1:exon

position:4330197:-1
position: 4330197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4371923:-1
position: 4371923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4371033-4371923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4342943-4343110:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4335115-4335268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4334935-4334970:-1:exon

position:4334935:-1
position: 4334935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4331169-4331276:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4330197-4330301:-1:exon

LOC117439172
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439172
product: Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_034074946.1
SIO_010081: LOC117439172
subclass of: SO_0000673
so part of: LOC117439172
location: complement(join(4330197..4330301,4331169..4331273,4334935..4334970,4335115..4335268,4342943..4343110,4371033..4371921))
location: region:4330197-4371921:-1
so has part: feature:4371033-4371921:-1:exon
so has part: feature:4342943-4343110:-1:exon
so has part: feature:4335115-4335268:-1:exon
so has part: feature:4334935-4334970:-1:exon
so has part: feature:4331169-4331273:-1:exon
so has part: feature:4330197-4330301:-1:exon

position:4371921:-1
position: 4371921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4371033-4371921:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4342943-4343110:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4335115-4335268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4334935-4334970:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4331169-4331273:-1:exon

position:4331273:-1
position: 4331273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4330197-4330301:-1:exon

LOC117439172
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like isoform X2
translation: MSKLRPRQCVLEKGSSGYGFHLHGEKGKTGQFIRLVEPDTPASAAGLLAGDLLAFVNGESVEGESHQQVVARIRATAEALELIVVDSETAELLKKQNLQCRKEFVTEGIPLPGGDSDSEHGDTQSNGTPRECTPAPPDNGDAASERSERLSVSSSTKERGGLRPRLCHMQKGSGGYGFNLHSEKSSPGQFIRAVDDSSPAQQAGLKPQDKILQVNGVSVKDMQHSEVVAAIKAGGEETSLLVVDAETEEFFKMCDVLPTEEHLSGALPEPKKSSGGGGSRGEAQSLCELFSFQRVLQRLPAGAGQQRAPSPAPRPG
SIO_010081: LOC117439172
subclass of: SO_0000673
so part of: LOC117439172
location: complement(join(4330285..4330301,4331169..4331273,4334935..4334970,4335115..4335268,4342943..4343110,4371033..4371503))
location: region:4330285-4371503:-1
so has part: feature:4371033-4371503:-1:exon
so has part: feature:4342943-4343110:-1:exon
so has part: feature:4335115-4335268:-1:exon
so has part: feature:4334935-4334970:-1:exon
so has part: feature:4331169-4331273:-1:exon
so has part: feature:4330285-4330301:-1:exon

XP_033930837.1
type: Protein
SIO_000068: ncbiprotein

position:4330285:-1
position: 4330285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4371033-4371503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4342943-4343110:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4335115-4335268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4334935-4334970:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4331169-4331273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4330285-4330301:-1:exon

LOC117439172
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like isoform X1
translation: MSKLRPRQCVLEKGSSGYGFHLHGEKGKTGQFIRLVEPDTPASAAGLLAGDLLAFVNGESVEGESHQQVVARIRATAEALELIVVDSETAELLKKQNLQCRKEFVTEGIPLPGGDSDSEHGDTQSNGTPRECTPAPPDNGDAASERSERLSVSSSTKERGGLRPRLCHMQKGSGGYGFNLHSEKSSPGQFIRAVDDSSPAQQAGLKPQDKILQVNGVSVKDMQHSEVVAAIKAGGEETSLLVVDAETEEFFKMCDVLPTEEHLSGALPEPKKSSGGAGGSRGEAQSLCELFSFQRVLQRLPAGAGQQRAPSPAPRPG
SIO_010081: LOC117439172
subclass of: SO_0000673
so part of: LOC117439172
location: complement(join(4330285..4330301,4331169..4331276,4334935..4334970,4335115..4335268,4342943..4343110,4371033..4371503))
location: region:4330285-4371503:-1
so has part: feature:4371033-4371503:-1:exon
so has part: feature:4342943-4343110:-1:exon
so has part: feature:4335115-4335268:-1:exon
so has part: feature:4334935-4334970:-1:exon
so has part: feature:4331169-4331276:-1:exon
so has part: feature:4330285-4330301:-1:exon

XP_033930836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4371033-4371503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4342943-4343110:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4335115-4335268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4334935-4334970:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4331169-4331276:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4330285-4330301:-1:exon

LOC117439335
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439335
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4448880..4450135)
location: region:4448880-4450135:-1
so has part: feature:4448880-4450135:-1:exon
subclass of: SO_0000010

117439335
type: Gene
SIO_000068: ncbigene

position:4448880:-1
position: 4448880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4450135:-1
position: 4450135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4448880-4450135:-1:exon

LOC117439335
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439335
product: uncharacterized LOC117439335
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034075242.1
SIO_010081: LOC117439335
subclass of: SO_0000673
so part of: LOC117439335
location: complement(join(4448880..4449510,4449676..4450135))
location: region:4448880-4450135:-1
so has part: feature:4449676-4450135:-1:exon
so has part: feature:4448880-4449510:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4449676-4450135:-1:exon

position:4449676:-1
position: 4449676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4448880-4449510:-1:exon

position:4449510:-1
position: 4449510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439335
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117439335
translation: MSFLLPYVQQRSSKSSLSNPSPVEDMERASTPLSLETEEHARTACGSPAPPPLVPTTSAERQRPSRSRSPRDPISTPAAAQRSTRDTRRRPQSTDLGEQLISLLQEPPTAPHMPDSELEESYYFALSLVPMLQRLDKDRKHQAKVCILNTFHNLERDTQHQQHWQPIDHPPATQHSIHTSRPVAFRPSVPQPPRAQSTPTGPSDMLSSSSSSAWQESFYEQ
SIO_010081: LOC117439335
subclass of: SO_0000673
so part of: LOC117439335
location: complement(join(4448880..4449510,4449676..4449710))
location: region:4448880-4449710:-1
so has part: feature:4449676-4449710:-1:exon
so has part: feature:4448880-4449510:-1:exon

XP_033931133.1
type: Protein
SIO_000068: ncbiprotein

position:4449710:-1
position: 4449710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4449676-4449710:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4448880-4449510:-1:exon

LOC117468318
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117468318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4468307..4562422)
location: region:4468307-4562422:-1
so has part: feature:4468307-4562422:-1:exon
subclass of: SO_0000010

117468318
type: Gene
SIO_000068: ncbigene

position:4468307:-1
position: 4468307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4562422:-1
position: 4562422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4468307-4562422:-1:exon

LOC117468318
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117468318
product: ras-related protein Rab-37-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034112376.1
SIO_010081: LOC117468318
subclass of: SO_0000673
so part of: LOC117468318
location: complement(join(4468307..4469217,4509708..4509784,4509862..4509918,4525249..4525314,4526739..4526849,4562096..4562422))
location: region:4468307-4562422:-1
so has part: feature:4562096-4562422:-1:exon
so has part: feature:4526739-4526849:-1:exon
so has part: feature:4525249-4525314:-1:exon
so has part: feature:4509862-4509918:-1:exon
so has part: feature:4509708-4509784:-1:exon
so has part: feature:4468307-4469217:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4562096-4562422:-1:exon

position:4562096:-1
position: 4562096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4526739-4526849:-1:exon

position:4526739:-1
position: 4526739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4526849:-1
position: 4526849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4525249-4525314:-1:exon

position:4525249:-1
position: 4525249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4525314:-1
position: 4525314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4509862-4509918:-1:exon

position:4509862:-1
position: 4509862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4509918:-1
position: 4509918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4509708-4509784:-1:exon

position:4509708:-1
position: 4509708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4509784:-1
position: 4509784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4468307-4469217:-1:exon

position:4469217:-1
position: 4469217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117468318
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117468318
product: ras-related protein Rab-37-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034112375.1
SIO_010081: LOC117468318
subclass of: SO_0000673
so part of: LOC117468318
location: complement(join(4468307..4469217,4509708..4509784,4509862..4509918,4525249..4525314,4525494..4525546,4525654..4525720,4525850..4525891,4526739..4526849,4562096..4562422))
location: region:4468307-4562422:-1
so has part: feature:4562096-4562422:-1:exon
so has part: feature:4526739-4526849:-1:exon
so has part: feature:4525850-4525891:-1:exon
so has part: feature:4525654-4525720:-1:exon
so has part: feature:4525494-4525546:-1:exon
so has part: feature:4525249-4525314:-1:exon
so has part: feature:4509862-4509918:-1:exon
so has part: feature:4509708-4509784:-1:exon
so has part: feature:4468307-4469217:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4562096-4562422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4526739-4526849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4525850-4525891:-1:exon

position:4525850:-1
position: 4525850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4525891:-1
position: 4525891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4525654-4525720:-1:exon

position:4525654:-1
position: 4525654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4525720:-1
position: 4525720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4525494-4525546:-1:exon

position:4525494:-1
position: 4525494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4525546:-1
position: 4525546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4525249-4525314:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4509862-4509918:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4509708-4509784:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4468307-4469217:-1:exon

LOC117468318
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117468318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-37-like isoform X2
translation: MRESDSEEKEREGGERERESLIPLASCSAAERAEDRMERMESMEPISAHYTTDYPEIHPDSGFESRESCDIQANTPPPTTYDEELVHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTAWLTEIHEYAQSDVVIMLLGNKADMSSDRAIRREEGERLAREYSVPFMETSAKTGVNVDLAFTAVSKELKHRAVQHPNEPKFQIHEYIEAQKEKSGCCSYI
SIO_010081: LOC117468318
subclass of: SO_0000673
so part of: LOC117468318
location: complement(join(4469112..4469217,4509708..4509784,4509862..4509918,4525249..4525314,4526739..4526849,4562096..4562359))
location: region:4469112-4562359:-1
so has part: feature:4562096-4562359:-1:exon
so has part: feature:4526739-4526849:-1:exon
so has part: feature:4525249-4525314:-1:exon
so has part: feature:4509862-4509918:-1:exon
so has part: feature:4509708-4509784:-1:exon
so has part: feature:4469112-4469217:-1:exon

XP_033968267.1
type: Protein
SIO_000068: ncbiprotein

position:4469112:-1
position: 4469112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4562359:-1
position: 4562359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4562096-4562359:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4526739-4526849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4525249-4525314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4509862-4509918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4509708-4509784:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4469112-4469217:-1:exon

LOC117468318
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117468318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-37-like isoform X1
translation: MRESDSEEKEREGGERERESLIPLASCSAAERAEDRMERMESMEPISAHYTTDYPEIHPDSGFESRESCDIQANTPPPTTYDEELVHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDDAKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDISSRTSFDNIRAWLTEIHEYAQSDVVIMLLGNKADMSSDRAIRREEGERLAREYSVPFMETSAKTGVNVDLAFTAVSKELKHRAVQHPNEPKFQIHEYIEAQKEKSGCCSYI
SIO_010081: LOC117468318
subclass of: SO_0000673
so part of: LOC117468318
location: complement(join(4469112..4469217,4509708..4509784,4509862..4509918,4525249..4525314,4525494..4525546,4525654..4525720,4525850..4525891,4526739..4526849,4562096..4562359))
location: region:4469112-4562359:-1
so has part: feature:4562096-4562359:-1:exon
so has part: feature:4526739-4526849:-1:exon
so has part: feature:4525850-4525891:-1:exon
so has part: feature:4525654-4525720:-1:exon
so has part: feature:4525494-4525546:-1:exon
so has part: feature:4525249-4525314:-1:exon
so has part: feature:4509862-4509918:-1:exon
so has part: feature:4509708-4509784:-1:exon
so has part: feature:4469112-4469217:-1:exon

XP_033968266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4562096-4562359:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4526739-4526849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4525850-4525891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4525654-4525720:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4525494-4525546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4525249-4525314:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4509862-4509918:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4509708-4509784:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4469112-4469217:-1:exon

LOC117439313
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439313
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4651053..4657678)
location: region:4651053-4657678:-1
so has part: feature:4651053-4657678:-1:exon
subclass of: SO_0000010

117439313
type: Gene
SIO_000068: ncbigene

position:4651053:-1
position: 4651053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4657678:-1
position: 4657678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4651053-4657678:-1:exon

LOC117439313
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439313
product: 39S ribosomal protein L27, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_034075201.1
SIO_010081: LOC117439313
subclass of: SO_0000673
so part of: LOC117439313
location: complement(join(4651053..4651553,4651651..4651718,4656550..4656678,4657591..4657678))
location: region:4651053-4657678:-1
so has part: feature:4657591-4657678:-1:exon
so has part: feature:4656550-4656678:-1:exon
so has part: feature:4651651-4651718:-1:exon
so has part: feature:4651053-4651553:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4657591-4657678:-1:exon

position:4657591:-1
position: 4657591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4656550-4656678:-1:exon

position:4656550:-1
position: 4656550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4656678:-1
position: 4656678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4651651-4651718:-1:exon

position:4651651:-1
position: 4651651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4651718:-1
position: 4651718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4651053-4651553:-1:exon

position:4651553:-1
position: 4651553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117439313
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439313
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L27, mitochondrial-like
translation: MAALASLMLKSRTGVLVPAQTALLDLLRFASKKAGGSSKNVGGKSPGQRYGFKKQDGNFVHAGNILATQRLLRYHPGAHVGMGTNNTLFALENGYIKFTKEVFVPPPRSAEATQVITKLPKGAVLYKTFISVLPVPQEGKFRLVDMV
SIO_010081: LOC117439313
subclass of: SO_0000673
so part of: LOC117439313
location: complement(join(4651347..4651553,4651651..4651718,4656550..4656678,4657591..4657630))
location: region:4651347-4657630:-1
so has part: feature:4657591-4657630:-1:exon
so has part: feature:4656550-4656678:-1:exon
so has part: feature:4651651-4651718:-1:exon
so has part: feature:4651347-4651553:-1:exon

XP_033931092.1
type: Protein
SIO_000068: ncbiprotein

position:4651347:-1
position: 4651347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4657630:-1
position: 4657630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4657591-4657630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4656550-4656678:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4651651-4651718:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4651347-4651553:-1:exon

LOC117439026
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439026
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4658047..4665528
location: region:4658047-4665528:1
so has part: feature:4658047-4665528:1:exon
subclass of: SO_0000010

117439026
type: Gene
SIO_000068: ncbigene

position:4658047:1
position: 4658047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4665528:1
position: 4665528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4658047-4665528:1:exon

LOC117439026
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439026
product: crossover junction endonuclease EME1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_034074714.1
SIO_010081: LOC117439026
subclass of: SO_0000673
so part of: LOC117439026
location: join(4658047..4658239,4664698..4665528)
location: region:4658047-4665528:1
so has part: feature:4658047-4658239:1:exon
so has part: feature:4664698-4665528:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4658047-4658239:1:exon

position:4658239:1
position: 4658239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4664698-4665528:1:exon

position:4664698:1
position: 4664698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117439026
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439026
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: crossover junction endonuclease EME1-like
translation: MREHGGCSDSSSDLDEEFPVFDFLQSGRHPHPASQSSTDNTYSGNVGTYSGAADVMMISSDSDDDAPYVPLAQRLKQRQETVISASSSVTNGKDAQHYSPSKLGDLQLSRQNGLSESEQPLSFHQVRTVSPDEAAVFPQQGLPPADTKKNAAKHTLEIQSSRKEVLMKKQNREGHQSAKEGHRQEQERQRAERKALAEAAKALRPEECIKHMVVAVDPGTEKQSAQCLSGSTSSCLRIIKGHFVLRSIHNIHYIRAVAIH
SIO_010081: LOC117439026
subclass of: SO_0000673
so part of: LOC117439026
location: 4664714..4665496
location: region:4664714-4665496:1
so has part: feature:4664714-4665496:1:exon

XP_033930605.1
type: Protein
SIO_000068: ncbiprotein

position:4664714:1
position: 4664714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4665496:1
position: 4665496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4664714-4665496:1:exon

LOC117439371
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439371
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4670122..4675804)
location: region:4670122-4675804:-1
so has part: feature:4670122-4675804:-1:exon

117439371
type: Gene
SIO_000068: ncbigene

position:4670122:-1
position: 4670122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4675804:-1
position: 4675804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4670122-4675804:-1:exon

LOC117439371
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439371
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117439371
subclass of: SO_0000673
so part of: LOC117439371
location: complement(4670122..4670622)
location: region:4670122-4670622:-1
so has part: feature:4670122-4670622:-1:exon

position:4670622:-1
position: 4670622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4670122-4670622:-1:exon

LOC117439371
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439371
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117439371
subclass of: SO_0000673
so part of: LOC117439371
location: complement(4670720..4670787)
location: region:4670720-4670787:-1
so has part: feature:4670720-4670787:-1:exon

position:4670720:-1
position: 4670720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4670787:-1
position: 4670787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4670720-4670787:-1:exon

LOC117439371
type: Exon
subclass of: SO_0000147
RO_0002162: 52239
gene: LOC117439371
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117439371
subclass of: SO_0000673
so part of: LOC117439371
location: complement(4675610..4675804)
location: region:4675610-4675804:-1
so has part: feature:4675610-4675804:-1:exon

position:4675610:-1
position: 4675610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4675610-4675804:-1:exon

LOC117439025
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117439025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4677107..4696224
location: region:4677107-4696224:1
so has part: feature:4677107-4696224:1:exon
subclass of: SO_0000010

117439025
type: Gene
SIO_000068: ncbigene

position:4677107:1
position: 4677107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4696224:1
position: 4696224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4677107-4696224:1:exon

LOC117439025
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117439025
product: crossover junction endonuclease EME1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_034074713.1
SIO_010081: LOC117439025
subclass of: SO_0000673
so part of: LOC117439025
location: join(4677107..4677302,4683763..4684432,4690948..4691075,4691628..4691717,4692289..4692407,4692649..4692766,4695104..4695219,4695305..4695494,4695896..4696224)
location: region:4677107-4696224:1
so has part: feature:4677107-4677302:1:exon
so has part: feature:4683763-4684432:1:exon
so has part: feature:4690948-4691075:1:exon
so has part: feature:4691628-4691717:1:exon
so has part: feature:4692289-4692407:1:exon
so has part: feature:4692649-4692766:1:exon
so has part: feature:4695104-4695219:1:exon
so has part: feature:4695305-4695494:1:exon
so has part: feature:4695896-4696224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4677107-4677302:1:exon

position:4677302:1
position: 4677302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4683763-4684432:1:exon

position:4683763:1
position: 4683763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4684432:1
position: 4684432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4690948-4691075:1:exon

position:4690948:1
position: 4690948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4691075:1
position: 4691075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4691628-4691717:1:exon

position:4691628:1
position: 4691628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4691717:1
position: 4691717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4692289-4692407:1:exon

position:4692289:1
position: 4692289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4692407:1
position: 4692407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4692649-4692766:1:exon

position:4692649:1
position: 4692649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4692766:1
position: 4692766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4695104-4695219:1:exon

position:4695104:1
position: 4695104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4695219:1
position: 4695219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4695305-4695494:1:exon

position:4695305:1
position: 4695305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4695494:1
position: 4695494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4695896-4696224:1:exon

position:4695896:1
position: 4695896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117439025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117439025
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: crossover junction endonuclease EME1-like
translation: MREHGGCSDSSSDLDEEFPVFDFLQSGRHPHPASQSSTDNTYSGNVGTYSGAADVMMISSDSDDDAPYVPLAQRLKQRQETVISASSSVTNGKDAQHYSPSKLGDLQLSRQNGLSESEQPLSFHQVRTVSPDEAAVFPQQGCHPPTPRRMLPSTRXEIQSSRKEVLMKKQNREGHQSAKEGHRQEQERQRAERKALAEAAKALRPEECIKHMVVAVDPALLQLEGGGTLLAALQALGCNCAIEKQGIPRSVSWMRRAPCAQPEDAECVREALVVMQMTVDDFITLTHSYIQEQRHGAGSGPTLSSWVQQHQTRHPAKTLSLVVLDLEKYFRSQKSQTKKQNGGEEGGVKKRRKNGGAQILPEVSRVDMEEAVVHLQLHNGVSVCFLSTWKDFSEHITMTTKAVAEAPFKQEREKTGFSFYLESEWAGGQRVDKAGKGLLQVWRRQIQQLNRVSPDMASALLAAYPSPQLLHKAYSQCQSERESVSLLSELLIRRGEGVTSTTRHVGPELSRRLFLLMTSCDPENTLDSTV
SIO_010081: LOC117439025
subclass of: SO_0000673
so part of: LOC117439025
location: join(4683779..4684432,4690948..4691075,4691628..4691717,4692289..4692407,4692649..4692766,4695104..4695219,4695305..4695494,4695896..4696072)
location: region:4683779-4696072:1
so has part: feature:4683779-4684432:1:exon
so has part: feature:4690948-4691075:1:exon
so has part: feature:4691628-4691717:1:exon
so has part: feature:4692289-4692407:1:exon
so has part: feature:4692649-4692766:1:exon
so has part: feature:4695104-4695219:1:exon
so has part: feature:4695305-4695494:1:exon
so has part: feature:4695896-4696072:1:exon

XP_033930604.1
type: Protein
SIO_000068: ncbiprotein

position:4683779:1
position: 4683779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4696072:1
position: 4696072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4683779-4684432:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4690948-4691075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4691628-4691717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4692289-4692407:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4692649-4692766:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4695104-4695219:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4695305-4695494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4695896-4696072:1:exon

rerg
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: rerg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4731284..4815514
location: region:4731284-4815514:1
so has part: feature:4731284-4815514:1:exon
subclass of: SO_0000010

117439102
type: Gene
SIO_000068: ncbigene

position:4731284:1
position: 4731284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4815514:1
position: 4815514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4731284-4815514:1:exon

rerg
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: rerg
product: RAS-like, estrogen-regulated, growth inhibitor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034074842.1
SIO_010081: rerg
subclass of: SO_0000673
so part of: rerg
location: join(4731284..4731307,4736230..4736359,4784200..4784256,4811023..4811096,4814531..4815514)
location: region:4731284-4815514:1
so has part: feature:4731284-4731307:1:exon
so has part: feature:4736230-4736359:1:exon
so has part: feature:4784200-4784256:1:exon
so has part: feature:4811023-4811096:1:exon
so has part: feature:4814531-4815514:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4731284-4731307:1:exon

position:4731307:1
position: 4731307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4736230-4736359:1:exon

position:4736230:1
position: 4736230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4736359:1
position: 4736359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4784200-4784256:1:exon

position:4784200:1
position: 4784200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4784256:1
position: 4784256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4811023-4811096:1:exon

position:4811023:1
position: 4811023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4811096:1
position: 4811096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4814531-4815514:1:exon

position:4814531:1
position: 4814531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rerg
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: rerg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related and estrogen-regulated growth inhibitor
translation: MAKSPEVKLAVFGRAGVGKSALVVRFLTRRFIWEYDPTLESTYRHQANIDDEVVAMEILDTAGQEDIQQKESHMRWGDGFVIVYDITDRGSFEEVAPLRSLLEEVKRPKNVPLVLVGNKSDLDHARQVGTEEGERLAAEMACAFYECSACANEGGTVAEAFHELCREVRRRKAVQGKARRRSSTTHVKQAINKMLTKISS
SIO_010081: rerg
subclass of: SO_0000673
so part of: rerg
location: join(4736299..4736359,4784200..4784256,4811023..4811096,4814531..4814941)
location: region:4736299-4814941:1
so has part: feature:4736299-4736359:1:exon
so has part: feature:4784200-4784256:1:exon
so has part: feature:4811023-4811096:1:exon
so has part: feature:4814531-4814941:1:exon

XP_033930733.1
type: Protein
SIO_000068: ncbiprotein

position:4736299:1
position: 4736299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4814941:1
position: 4814941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4736299-4736359:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4784200-4784256:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4811023-4811096:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4814531-4814941:1:exon

LOC117468367
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117468367
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4848215..5002197)
location: region:4848215-5002197:-1
so has part: feature:4848215-5002197:-1:exon
subclass of: SO_0000010

117468367
type: Gene
SIO_000068: ncbigene

position:4848215:-1
position: 4848215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5002197:-1
position: 5002197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4848215-5002197:-1:exon

LOC117468367
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117468367
product: synapsin-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034112441.1
SIO_010081: LOC117468367
subclass of: SO_0000673
so part of: LOC117468367
location: complement(join(4848215..4850030,4850113..4850269,4850376..4850394,4851642..4851773,4858278..4858380,4858682..4858756,4859834..4859976,4867988..4868050,4927481..4927570,4928540..4928696,4958343..4958434,4977227..4977284,4991680..4992168,5001589..5002197))
location: region:4848215-5002197:-1
so has part: feature:5001589-5002197:-1:exon
so has part: feature:4991680-4992168:-1:exon
so has part: feature:4977227-4977284:-1:exon
so has part: feature:4958343-4958434:-1:exon
so has part: feature:4928540-4928696:-1:exon
so has part: feature:4927481-4927570:-1:exon
so has part: feature:4867988-4868050:-1:exon
so has part: feature:4859834-4859976:-1:exon
so has part: feature:4858682-4858756:-1:exon
so has part: feature:4858278-4858380:-1:exon
so has part: feature:4851642-4851773:-1:exon
so has part: feature:4850376-4850394:-1:exon
so has part: feature:4850113-4850269:-1:exon
so has part: feature:4848215-4850030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5001589-5002197:-1:exon

position:5001589:-1
position: 5001589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4991680-4992168:-1:exon

position:4991680:-1
position: 4991680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4992168:-1
position: 4992168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4977227-4977284:-1:exon

position:4977227:-1
position: 4977227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4977284:-1
position: 4977284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4958343-4958434:-1:exon

position:4958343:-1
position: 4958343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4958434:-1
position: 4958434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4928540-4928696:-1:exon

position:4928540:-1
position: 4928540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4928696:-1
position: 4928696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4927481-4927570:-1:exon

position:4927481:-1
position: 4927481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4927570:-1
position: 4927570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4867988-4868050:-1:exon

position:4867988:-1
position: 4867988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4868050:-1
position: 4868050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4859834-4859976:-1:exon

position:4859834:-1
position: 4859834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4859976:-1
position: 4859976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4858682-4858756:-1:exon

position:4858682:-1
position: 4858682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4858756:-1
position: 4858756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4858278-4858380:-1:exon

position:4858278:-1
position: 4858278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4858380:-1
position: 4858380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4851642-4851773:-1:exon

position:4851642:-1
position: 4851642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4851773:-1
position: 4851773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4850376-4850394:-1:exon

position:4850376:-1
position: 4850376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4850394:-1
position: 4850394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4850113-4850269:-1:exon

position:4850113:-1
position: 4850113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4850269:-1
position: 4850269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4848215-4850030:-1:exon

position:4850030:-1
position: 4850030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117468367
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117468367
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synapsin-3-like
translation: MNYLRRRLSDSSFVANLPNGYMMDLQRPTPPDSSPSSTSSPASPATERRQPPGLPTPAPSPAPGLGSGSGPVSGSGSASGAGSFLSSFSSVVKSAQMAQNVAAAAHAKAAASAAEGAPPGSGQPPKPVIRKPKILLVVDDQNTDWSKYFRGKKLNGEYEIRVEQAEFSEMNLASYVTSGCMVDMQVNKGGTRVVRSFKPDFVLIRQHAYSMVPGEDFRNLVIGLHFGGVPSSNSLFSIYNFCSKPWVFSQMIKLYHSLGPEKFPLNEQTFYPNHAQMVTPPPCPLVVKMGHAYAGMGKIKVETPQDFQDITSVVALAGTYATTEPFVHSKYDIRIQKIGNNYKAYMRTSISGNWKANTGSAMLEQIAMTDRYRLWVDSCSEMFGGLDICAVKAVHGKDGNDYIIEVMDSSMPLIGEHVEEDRQLITELVLNKMAELLLGVSTPQPFAVKTTQPRRGGQRSASASPSQSAQGSPQRARSASTSPSQAFQPGPIPATSGPGAQKQSPQLNKSQSLTNTFTETLRGSLTDDEAKAETIRSLRQSFASLFSD
SIO_010081: LOC117468367
subclass of: SO_0000673
so part of: LOC117468367
location: complement(join(4849907..4850030,4850113..4850269,4850376..4850394,4851642..4851773,4858278..4858380,4858682..4858756,4859834..4859976,4867988..4868050,4927481..4927570,4928540..4928696,4958343..4958434,4977227..4977284,4991680..4992113))
location: region:4849907-4992113:-1
so has part: feature:4991680-4992113:-1:exon
so has part: feature:4977227-4977284:-1:exon
so has part: feature:4958343-4958434:-1:exon
so has part: feature:4928540-4928696:-1:exon
so has part: feature:4927481-4927570:-1:exon
so has part: feature:4867988-4868050:-1:exon
so has part: feature:4859834-4859976:-1:exon
so has part: feature:4858682-4858756:-1:exon
so has part: feature:4858278-4858380:-1:exon
so has part: feature:4851642-4851773:-1:exon
so has part: feature:4850376-4850394:-1:exon
so has part: feature:4850113-4850269:-1:exon
so has part: feature:4849907-4850030:-1:exon

XP_033968332.1
type: Protein
SIO_000068: ncbiprotein

position:4849907:-1
position: 4849907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4992113:-1
position: 4992113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4991680-4992113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4977227-4977284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4958343-4958434:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4928540-4928696:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4927481-4927570:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4867988-4868050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4859834-4859976:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4858682-4858756:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4858278-4858380:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4851642-4851773:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4850376-4850394:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4850113-4850269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4849907-4850030:-1:exon

LOC117468368
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117468368
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4908196..4927414
location: region:4908196-4927414:1
so has part: feature:4908196-4927414:1:exon
subclass of: SO_0000010

117468368
type: Gene
SIO_000068: ncbigene

position:4908196:1
position: 4908196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4927414:1
position: 4927414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4908196-4927414:1:exon

LOC117468368
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117468368
product: metalloproteinase inhibitor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_034112442.1
SIO_010081: LOC117468368
subclass of: SO_0000673
so part of: LOC117468368
location: join(4908196..4908391,4916875..4916957,4918413..4918524,4920248..4920369,4925083..4927414)
location: region:4908196-4927414:1
so has part: feature:4908196-4908391:1:exon
so has part: feature:4916875-4916957:1:exon
so has part: feature:4918413-4918524:1:exon
so has part: feature:4920248-4920369:1:exon
so has part: feature:4925083-4927414:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4908196-4908391:1:exon

position:4908391:1
position: 4908391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4916875-4916957:1:exon

position:4916875:1
position: 4916875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4916957:1
position: 4916957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4918413-4918524:1:exon

position:4918413:1
position: 4918413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4918524:1
position: 4918524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4920248-4920369:1:exon

position:4920248:1
position: 4920248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4920369:1
position: 4920369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4925083-4927414:1:exon

position:4925083:1
position: 4925083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117468368
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117468368
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metalloproteinase inhibitor 3
translation: MRSGTQPLLGLLLLLSLQGSPLTEACSCAMTHPQDAFCSADIVIRAKVVGKKLLRDGHFGTMRYTVKQMKMYKGFEKVQHVQHIYTDASEGLCGVKFDINKYQYLITGRVYDGKVYTGLCNFNERWERLSLAQKKGINHRYQLGCNCRIKPCHYLPCFVTSKNECLWTDMLSHFGYPGYQSRHYACIQQKEGYCSWYRGMTSRDKTAINATDP
SIO_010081: LOC117468368
subclass of: SO_0000673
so part of: LOC117468368
location: join(4908265..4908391,4916875..4916957,4918413..4918524,4920248..4920369,4925083..4925280)
location: region:4908265-4925280:1
so has part: feature:4908265-4908391:1:exon
so has part: feature:4916875-4916957:1:exon
so has part: feature:4918413-4918524:1:exon
so has part: feature:4920248-4920369:1:exon
so has part: feature:4925083-4925280:1:exon

XP_033968333.1
type: Protein
SIO_000068: ncbiprotein

position:4908265:1
position: 4908265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4925280:1
position: 4925280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4908265-4908391:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4916875-4916957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4918413-4918524:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4920248-4920369:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4925083-4925280:1:exon

si:ch73-252i11.1
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: si:ch73-252i11.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5050908..5071175)
location: region:5050908-5071175:-1
so has part: feature:5050908-5071175:-1:exon
subclass of: SO_0000010

117439103
type: Gene
SIO_000068: ncbigene

position:5050908:-1
position: 5050908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5071175:-1
position: 5071175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5050908-5071175:-1:exon

si:ch73-252i11.1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: si:ch73-252i11.1
product: uncharacterized protein LOC553517 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_034074843.1
SIO_010081: si:ch73-252i11.1
subclass of: SO_0000673
so part of: si:ch73-252i11.1
location: complement(join(5050908..5051800,5053267..5053418,5055087..5055217,5058747..5058819,5058921..5059017,5059097..5059217,5065545..5065710,5065816..5065945,5066709..5066759,5066849..5067605,5068569..5068704,5070791..5071175))
location: region:5050908-5071175:-1
so has part: feature:5070791-5071175:-1:exon
so has part: feature:5068569-5068704:-1:exon
so has part: feature:5066849-5067605:-1:exon
so has part: feature:5066709-5066759:-1:exon
so has part: feature:5065816-5065945:-1:exon
so has part: feature:5065545-5065710:-1:exon
so has part: feature:5059097-5059217:-1:exon
so has part: feature:5058921-5059017:-1:exon
so has part: feature:5058747-5058819:-1:exon
so has part: feature:5055087-5055217:-1:exon
so has part: feature:5053267-5053418:-1:exon
so has part: feature:5050908-5051800:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5070791-5071175:-1:exon

position:5070791:-1
position: 5070791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5068569-5068704:-1:exon

position:5068569:-1
position: 5068569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5068704:-1
position: 5068704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5066849-5067605:-1:exon

position:5066849:-1
position: 5066849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5067605:-1
position: 5067605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5066709-5066759:-1:exon

position:5066709:-1
position: 5066709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5066759:-1
position: 5066759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5065816-5065945:-1:exon

position:5065816:-1
position: 5065816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5065945:-1
position: 5065945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5065545-5065710:-1:exon

position:5065545:-1
position: 5065545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5065710:-1
position: 5065710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5059097-5059217:-1:exon

position:5059097:-1
position: 5059097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5059217:-1
position: 5059217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5058921-5059017:-1:exon

position:5058921:-1
position: 5058921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5059017:-1
position: 5059017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5058747-5058819:-1:exon

position:5058747:-1
position: 5058747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5058819:-1
position: 5058819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5055087-5055217:-1:exon

position:5055087:-1
position: 5055087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5055217:-1
position: 5055217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5053267-5053418:-1:exon

position:5053267:-1
position: 5053267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5053418:-1
position: 5053418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5050908-5051800:-1:exon

position:5051800:-1
position: 5051800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

si:ch73-252i11.1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: si:ch73-252i11.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein mono-ADP-ribosyltransferase PARP12
translation: MELESEILKLICASQGSVNTEELLCNLGSGDATADIISNREKFAFVCPFGQPKVVARTWLRLCLVKDCPGACTGLHLCKKFLLTGSCPFTRTRTGCRFSHCLDSFHNAAKLTEHGLESLSRSELCTLLLQSDTRLLPQICHNYNNGGGQLGLCQEGDNCTRLHICEKYLNSVCSCTKNHDFSAPQPQKSLSDRGVPDQLFPSLMSVYANLLALKYADRQADSDASSANGLIPPQRERQRGRGRAGFRGNPGNMGNRGNMGNRGNRGFRGNRGNRGNRGNQGNQPTRSTDEVVADFEILDLYTEDGLSQDRRPTSPYSNVSAAANDTDASSDDGKSRKPNLNKTSVAVQGRGGDRGNHQPLNRSRATAAPESVIDNANSEDGAGRRPRPVKDKTEICMFFIKGHCKHEDERCYKAHTKMPYSWQVLLDDQWTALPNNETIEKDYCDPKNTYSSSNPPVDFDTMTQGANKVRRLSTSNSLVDVSFLHTTEWVWYWEDEHASWTMYASRSGGHSAADTGSAELEQKFLDNAKDVVEFSAGSQAYSLSFQDLIQTNKQYGTKRVVKRRPRFVSATDVKAKNTRRPLAQSGTVPDHWDKTQIAQTGYKTASLHRTSGEYMEIETLFCNTMRGFDIVAIERIQNKALWEAFQLKNKQMKDSNNGHNVTEKKLFHGTKSEYVAVICHKNFDWRVCGVNGTAFGQGSYFARDAKYSHSYTEDSHVKSMFVSRVLVGDYTRGSSSYRKPPSKDGGVINLYDSCVDDEIKPSIFVVFDSNQIYPEYLLQYKITHPLVSLVAAPAPTPVPAPRPAPKPSVTVYQPSTSSYRPSTPSYQPSTSSYRPSTPSYQPSTPSYQPSTSTNYPSVNRIQNRFSPSPPPTPVNRTSSFSPSPPPTPSPKKSSDSCVIS
SIO_010081: si:ch73-252i11.1
subclass of: SO_0000673
so part of: si:ch73-252i11.1
location: complement(join(5051190..5051800,5053267..5053418,5055087..5055217,5058747..5058819,5058921..5059017,5059097..5059217,5065545..5065710,5065816..5065945,5066709..5066759,5066849..5067605,5068569..5068704,5070791..5071068))
location: region:5051190-5071068:-1
so has part: feature:5070791-5071068:-1:exon
so has part: feature:5068569-5068704:-1:exon
so has part: feature:5066849-5067605:-1:exon
so has part: feature:5066709-5066759:-1:exon
so has part: feature:5065816-5065945:-1:exon
so has part: feature:5065545-5065710:-1:exon
so has part: feature:5059097-5059217:-1:exon
so has part: feature:5058921-5059017:-1:exon
so has part: feature:5058747-5058819:-1:exon
so has part: feature:5055087-5055217:-1:exon
so has part: feature:5053267-5053418:-1:exon
so has part: feature:5051190-5051800:-1:exon

XP_033930734.1
type: Protein
SIO_000068: ncbiprotein

position:5051190:-1
position: 5051190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5071068:-1
position: 5071068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5070791-5071068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5068569-5068704:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5066849-5067605:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5066709-5066759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5065816-5065945:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5065545-5065710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5059097-5059217:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5058921-5059017:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5058747-5058819:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5055087-5055217:-1:exon