Pseudochaenichthys georgianus chromosome 20, fPseGeo1.1, whole genome shotgun sequence.
type: Entry
definition: Pseudochaenichthys georgianus chromosome 20, fPseGeo1.1, whole genome shotgun sequence.
sequence version: NC_047522.1
sequence date: 2020-05-06
sequence: sequence
division: CON
label: NC_047522.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA629555
dblink: SAMEA104132832
keyword: WGS
keyword: RefSeq
source: Pseudochaenichthys georgianus (South Georgia icefish)
organism: Pseudochaenichthys georgianus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Channichthyidae; Pseudochaenichthys.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR792565.1.\nAssembly name: fPseGeo1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the SC on 2020/04/15. The\noriginal whole-genome shotgun project has the accession\nCADEHP000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Pseudochaenichthys georgianus\n Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 24389971
topology: linear
so has quality: SO_0000987
location: 1..24389971
location: region:1-24389971:1
RO_0002162: 52239

NC_047522
type: RefSeq
SIO_000068: refseq

PRJNA629555
type: BioProject
SIO_000068: bioproject

SAMEA104132832
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24389971:1
position: 24389971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-24389971:1:source
so part of: sequence
organism: Pseudochaenichthys georgianus
mol type: genomic DNA
chromosome: 20

52239
type: Taxonomy
SIO_000068: taxonomy

LOC117466040
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1..4562
location: region:1-4562:1
so has part: feature:1-4562:1:exon
subclass of: SO_0000011

117466040
type: Gene
SIO_000068: ncbigene

position:4562:1
position: 4562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-4562:1:exon

LOC117466040
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117466040
product: uncharacterized LOC117466040
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004554234.1
SIO_010081: LOC117466040
subclass of: SO_0000673
so part of: LOC117466040
location: join(1..77,188..248,3609..4562)
location: region:1-4562:1
so has part: feature:1-77:1:exon
so has part: feature:188-248:1:exon
so has part: feature:3609-4562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-77:1:exon

position:77:1
position: 77
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:188-248:1:exon

position:188:1
position: 188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248:1
position: 248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3609-4562:1:exon

position:3609:1
position: 3609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117465941
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9687..14100)
location: region:9687-14100:-1
so has part: feature:9687-14100:-1:exon
subclass of: SO_0000010

117465941
type: Gene
SIO_000068: ncbigene

position:9687:-1
position: 9687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14100:-1
position: 14100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9687-14100:-1:exon

LOC117465941
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465941
product: prolactin-releasing peptide-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034109053.1
SIO_010081: LOC117465941
subclass of: SO_0000673
so part of: LOC117465941
location: complement(join(9687..9993,11861..12022,13951..14100))
location: region:9687-14100:-1
so has part: feature:13951-14100:-1:exon
so has part: feature:11861-12022:-1:exon
so has part: feature:9687-9993:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13951-14100:-1:exon

position:13951:-1
position: 13951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11861-12022:-1:exon

position:11861:-1
position: 11861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12022:-1
position: 12022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9687-9993:-1:exon

position:9993:-1
position: 9993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117465941
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prolactin-releasing peptide-like
translation: MHPGRSADDWLPAALSLLLLSCSFSRAHSSTLEHDFPLVHNVDNRSPEIDPFWYVGRGVRPIGRFGKRHSGLQGSGGATPGLRTLSLLLLHSLRNRESLEEEDRDWLP
SIO_010081: LOC117465941
subclass of: SO_0000673
so part of: LOC117465941
location: complement(join(9803..9993,11861..11996))
location: region:9803-11996:-1
so has part: feature:11861-11996:-1:exon
so has part: feature:9803-9993:-1:exon

XP_033964944.1
type: Protein
SIO_000068: ncbiprotein

position:9803:-1
position: 9803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11996:-1
position: 11996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11861-11996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9803-9993:-1:exon

shrprbck1r
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: shrprbck1r
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 22768..53185
location: region:22768-53185:1
so has part: feature:22768-53185:1:exon
subclass of: SO_0000010

117465727
type: Gene
SIO_000068: ncbigene

position:22768:1
position: 22768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53185:1
position: 53185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22768-53185:1:exon

shrprbck1r
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: shrprbck1r
product: sharpin and rbck1 related
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_034108716.1
SIO_010081: shrprbck1r
subclass of: SO_0000673
so part of: shrprbck1r
location: join(22768..23636,31381..31555,35096..35173,35404..35545,36007..36097,37206..37545,40012..40112,41718..41888,44215..44375,48034..48145,48960..49139,49642..49740,52284..52427,52773..53185)
location: region:22768-53185:1
so has part: feature:22768-23636:1:exon
so has part: feature:31381-31555:1:exon
so has part: feature:35096-35173:1:exon
so has part: feature:35404-35545:1:exon
so has part: feature:36007-36097:1:exon
so has part: feature:37206-37545:1:exon
so has part: feature:40012-40112:1:exon
so has part: feature:41718-41888:1:exon
so has part: feature:44215-44375:1:exon
so has part: feature:48034-48145:1:exon
so has part: feature:48960-49139:1:exon
so has part: feature:49642-49740:1:exon
so has part: feature:52284-52427:1:exon
so has part: feature:52773-53185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22768-23636:1:exon

position:23636:1
position: 23636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:31381-31555:1:exon

position:31381:1
position: 31381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31555:1
position: 31555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:35096-35173:1:exon

position:35096:1
position: 35096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35173:1
position: 35173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:35404-35545:1:exon

position:35404:1
position: 35404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35545:1
position: 35545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:36007-36097:1:exon

position:36007:1
position: 36007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36097:1
position: 36097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:37206-37545:1:exon

position:37206:1
position: 37206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37545:1
position: 37545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:40012-40112:1:exon

position:40012:1
position: 40012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40112:1
position: 40112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:41718-41888:1:exon

position:41718:1
position: 41718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41888:1
position: 41888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:44215-44375:1:exon

position:44215:1
position: 44215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44375:1
position: 44375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:48034-48145:1:exon

position:48034:1
position: 48034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48145:1
position: 48145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:48960-49139:1:exon

position:48960:1
position: 48960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49139:1
position: 49139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:49642-49740:1:exon

position:49642:1
position: 49642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49740:1
position: 49740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:52284-52427:1:exon

position:52284:1
position: 52284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52427:1
position: 52427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:52773-53185:1:exon

position:52773:1
position: 52773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

shrprbck1r
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: shrprbck1r
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ranBP-type and C3HC4-type zinc finger-containing protein 1
translation: MSLTSGGWAPGFTQDQQTQGQTPALQGLHAGAQHPQPGCHTVLASVRVSVCHSGIRPLCLPGAGDMSLRLQLSMDPGKSGEFRLSLQQESGGVGRSVTITEFDLRSVNYEVKSPKCHELSLAAPPHDRISFNFRCEVEAQEWATVVLSSLRETQRVAPQHYSPPRPPDALQLEKTTALQRTEDTCLELTRAIEAGDMQSASLCAATLARQHAALKIQPTPRDAEDNEVNLVVAVEDSSSSCCVTVKVFPHMTTAALKQQMFLEYGFHPRVQRWVIGQCLCSDQRSLASYGVRQNDDSAFLFLLSARHARLSLQALQQDQESALLLTPPSLPLLSPPSLPPPTHPLNATSANGPSSLDRRPYTTLPAKLHSSTGGSERGNIREIRDLANMEMPQLNRALTPNTASTQGWACPSCTYINKPTRPGCEICSTNRPERYVVPGGYRPDDLELRRIQQEKEAVRQYQQAREAERRENFARLVLLDGQELLPNPEPVDCRICYVDLERGEGVLLRECLHCFCRECLRSVIMLSEEPEVACPYRDDTYSCTCSLQEREIRALVPAEEYERWLQRGLSVAESRCEGSYHCATPDCAGWCVYEDTVNVFHCPVCTKHNCLICKSIHEGMNCKQYQDDLAARAINDSAARRTTHLLKTLVQSGEAMHCPQCGIIVQKRDGCDWLRCTVCHSEICWVTRGPRWGPGGPGDTSGGCRCNVDNQKCHPKCQNCH
SIO_010081: shrprbck1r
subclass of: SO_0000673
so part of: shrprbck1r
location: join(23346..23636,31381..31555,35096..35173,35404..35545,36007..36097,37206..37545,40012..40112,41718..41888,44215..44375,48034..48145,48960..49139,49642..49740,52284..52427,52773..52853)
location: region:23346-52853:1
so has part: feature:23346-23636:1:exon
so has part: feature:31381-31555:1:exon
so has part: feature:35096-35173:1:exon
so has part: feature:35404-35545:1:exon
so has part: feature:36007-36097:1:exon
so has part: feature:37206-37545:1:exon
so has part: feature:40012-40112:1:exon
so has part: feature:41718-41888:1:exon
so has part: feature:44215-44375:1:exon
so has part: feature:48034-48145:1:exon
so has part: feature:48960-49139:1:exon
so has part: feature:49642-49740:1:exon
so has part: feature:52284-52427:1:exon
so has part: feature:52773-52853:1:exon

XP_033964607.1
type: Protein
SIO_000068: ncbiprotein

position:23346:1
position: 23346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52853:1
position: 52853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23346-23636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:31381-31555:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35096-35173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35404-35545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36007-36097:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37206-37545:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:40012-40112:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:41718-41888:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44215-44375:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:48034-48145:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:48960-49139:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:49642-49740:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:52284-52427:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:52773-52853:1:exon

oplah
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: oplah
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 55172..85759
location: region:55172-85759:1
so has part: feature:55172-85759:1:exon
subclass of: SO_0000010

117465866
type: Gene
SIO_000068: ncbigene

position:55172:1
position: 55172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85759:1
position: 85759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55172-85759:1:exon

oplah
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: oplah
product: 5-oxoprolinase, ATP-hydrolysing, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034108927.1
SIO_010081: oplah
subclass of: SO_0000673
so part of: oplah
location: join(55172..55348,59755..59961,60949..61140,62146..62260,62970..63093,63856..64051,65692..65857,66148..66286,67531..67598,67987..68162,68256..68372,68718..68830,69376..69546,70610..70747,70892..71030,71169..71281,72360..72511,72965..73227,74042..74216,74847..75031,76491..76637,78776..78910,80820..80969,82453..82610,82784..82944,83603..83700,85071..85759)
location: region:55172-85759:1
so has part: feature:55172-55348:1:exon
so has part: feature:59755-59961:1:exon
so has part: feature:60949-61140:1:exon
so has part: feature:62146-62260:1:exon
so has part: feature:62970-63093:1:exon
so has part: feature:63856-64051:1:exon
so has part: feature:65692-65857:1:exon
so has part: feature:66148-66286:1:exon
so has part: feature:67531-67598:1:exon
so has part: feature:67987-68162:1:exon
so has part: feature:68256-68372:1:exon
so has part: feature:68718-68830:1:exon
so has part: feature:69376-69546:1:exon
so has part: feature:70610-70747:1:exon
so has part: feature:70892-71030:1:exon
so has part: feature:71169-71281:1:exon
so has part: feature:72360-72511:1:exon
so has part: feature:72965-73227:1:exon
so has part: feature:74042-74216:1:exon
so has part: feature:74847-75031:1:exon
so has part: feature:76491-76637:1:exon
so has part: feature:78776-78910:1:exon
so has part: feature:80820-80969:1:exon
so has part: feature:82453-82610:1:exon
so has part: feature:82784-82944:1:exon
so has part: feature:83603-83700:1:exon
so has part: feature:85071-85759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55172-55348:1:exon

position:55348:1
position: 55348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59755-59961:1:exon

position:59755:1
position: 59755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59961:1
position: 59961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:60949-61140:1:exon

position:60949:1
position: 60949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61140:1
position: 61140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:62146-62260:1:exon

position:62146:1
position: 62146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62260:1
position: 62260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:62970-63093:1:exon

position:62970:1
position: 62970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63093:1
position: 63093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:63856-64051:1:exon

position:63856:1
position: 63856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64051:1
position: 64051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:65692-65857:1:exon

position:65692:1
position: 65692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65857:1
position: 65857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:66148-66286:1:exon

position:66148:1
position: 66148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66286:1
position: 66286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:67531-67598:1:exon

position:67531:1
position: 67531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67598:1
position: 67598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:67987-68162:1:exon

position:67987:1
position: 67987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68162:1
position: 68162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:68256-68372:1:exon

position:68256:1
position: 68256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68372:1
position: 68372
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:68718-68830:1:exon

position:68718:1
position: 68718
reference: sequence
type: ForwardStrandPosition
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position:68830:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:69376-69546:1:exon

position:69376:1
position: 69376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69546:1
position: 69546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:70610-70747:1:exon

position:70610:1
position: 70610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70747:1
position: 70747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:70892-71030:1:exon

position:70892:1
position: 70892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71030:1
position: 71030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:71169-71281:1:exon

position:71169:1
position: 71169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71281:1
position: 71281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:72360-72511:1:exon

position:72360:1
position: 72360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72511:1
position: 72511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:72965-73227:1:exon

position:72965:1
position: 72965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73227:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:74042-74216:1:exon

position:74042:1
position: 74042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74216:1
position: 74216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:74847-75031:1:exon

position:74847:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75031:1
position: 75031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:76491-76637:1:exon

position:76491:1
position: 76491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76637:1
position: 76637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:78776-78910:1:exon

position:78776:1
position: 78776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78910:1
position: 78910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:80820-80969:1:exon

position:80820:1
position: 80820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80969:1
position: 80969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:82453-82610:1:exon

position:82453:1
position: 82453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82610:1
position: 82610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:82784-82944:1:exon

position:82784:1
position: 82784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82944:1
position: 82944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:83603-83700:1:exon

position:83603:1
position: 83603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83700:1
position: 83700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:85071-85759:1:exon

position:85071:1
position: 85071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

oplah
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: oplah
product: 5-oxoprolinase, ATP-hydrolysing, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034108929.1
SIO_010081: oplah
subclass of: SO_0000673
so part of: oplah
location: join(55172..55348,59772..59961,60949..61140,62146..62260,62970..63093,63856..64051,65692..65857,66148..66286,67531..67598,67987..68162,68256..68372,68718..68830,69376..69546,70610..70747,70892..71030,71169..71281,72360..72511,72965..73227,74042..74216,74847..75031,76491..76637,78776..78910,80820..80969,82453..82610,82784..82944,83603..83700,85071..85759)
location: region:55172-85759:1
so has part: feature:55172-55348:1:exon
so has part: feature:59772-59961:1:exon
so has part: feature:60949-61140:1:exon
so has part: feature:62146-62260:1:exon
so has part: feature:62970-63093:1:exon
so has part: feature:63856-64051:1:exon
so has part: feature:65692-65857:1:exon
so has part: feature:66148-66286:1:exon
so has part: feature:67531-67598:1:exon
so has part: feature:67987-68162:1:exon
so has part: feature:68256-68372:1:exon
so has part: feature:68718-68830:1:exon
so has part: feature:69376-69546:1:exon
so has part: feature:70610-70747:1:exon
so has part: feature:70892-71030:1:exon
so has part: feature:71169-71281:1:exon
so has part: feature:72360-72511:1:exon
so has part: feature:72965-73227:1:exon
so has part: feature:74042-74216:1:exon
so has part: feature:74847-75031:1:exon
so has part: feature:76491-76637:1:exon
so has part: feature:78776-78910:1:exon
so has part: feature:80820-80969:1:exon
so has part: feature:82453-82610:1:exon
so has part: feature:82784-82944:1:exon
so has part: feature:83603-83700:1:exon
so has part: feature:85071-85759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55172-55348:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59772-59961:1:exon

position:59772:1
position: 59772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:60949-61140:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:62146-62260:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62970-63093:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63856-64051:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:65692-65857:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:66148-66286:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67531-67598:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67987-68162:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68256-68372:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:68718-68830:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:69376-69546:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:70610-70747:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:70892-71030:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71169-71281:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72360-72511:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:72965-73227:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:74042-74216:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:74847-75031:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:76491-76637:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:78776-78910:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:80820-80969:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:82453-82610:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:82784-82944:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:83603-83700:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:85071-85759:1:exon

oplah
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: oplah
product: 5-oxoprolinase, ATP-hydrolysing, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034108926.1
SIO_010081: oplah
subclass of: SO_0000673
so part of: oplah
location: join(55172..55335,59755..59961,60949..61140,62146..62260,62970..63093,63856..64051,65692..65857,66148..66286,67531..67598,67987..68162,68256..68372,68718..68830,69376..69546,70610..70747,70892..71030,71169..71281,72360..72511,72965..73227,74042..74216,74847..75031,76491..76637,78776..78910,80820..80969,82453..82610,82784..82944,83603..83700,85071..85759)
location: region:55172-85759:1
so has part: feature:55172-55335:1:exon
so has part: feature:59755-59961:1:exon
so has part: feature:60949-61140:1:exon
so has part: feature:62146-62260:1:exon
so has part: feature:62970-63093:1:exon
so has part: feature:63856-64051:1:exon
so has part: feature:65692-65857:1:exon
so has part: feature:66148-66286:1:exon
so has part: feature:67531-67598:1:exon
so has part: feature:67987-68162:1:exon
so has part: feature:68256-68372:1:exon
so has part: feature:68718-68830:1:exon
so has part: feature:69376-69546:1:exon
so has part: feature:70610-70747:1:exon
so has part: feature:70892-71030:1:exon
so has part: feature:71169-71281:1:exon
so has part: feature:72360-72511:1:exon
so has part: feature:72965-73227:1:exon
so has part: feature:74042-74216:1:exon
so has part: feature:74847-75031:1:exon
so has part: feature:76491-76637:1:exon
so has part: feature:78776-78910:1:exon
so has part: feature:80820-80969:1:exon
so has part: feature:82453-82610:1:exon
so has part: feature:82784-82944:1:exon
so has part: feature:83603-83700:1:exon
so has part: feature:85071-85759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55172-55335:1:exon

position:55335:1
position: 55335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59755-59961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60949-61140:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:62146-62260:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62970-63093:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63856-64051:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:65692-65857:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:66148-66286:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67531-67598:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67987-68162:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68256-68372:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:68718-68830:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:69376-69546:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:70610-70747:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:70892-71030:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71169-71281:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72360-72511:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:72965-73227:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:74042-74216:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:74847-75031:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:76491-76637:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:78776-78910:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:80820-80969:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:82453-82610:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:82784-82944:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:83603-83700:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:85071-85759:1:exon

oplah
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: oplah
product: 5-oxoprolinase, ATP-hydrolysing, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034108928.1
SIO_010081: oplah
subclass of: SO_0000673
so part of: oplah
location: join(55172..55335,59772..59961,60949..61140,62146..62260,62970..63093,63856..64051,65692..65857,66148..66286,67531..67598,67987..68162,68256..68372,68718..68830,69376..69546,70610..70747,70892..71030,71169..71281,72360..72511,72965..73227,74042..74216,74847..75031,76491..76637,78776..78910,80820..80969,82453..82610,82784..82944,83603..83700,85071..85759)
location: region:55172-85759:1
so has part: feature:55172-55335:1:exon
so has part: feature:59772-59961:1:exon
so has part: feature:60949-61140:1:exon
so has part: feature:62146-62260:1:exon
so has part: feature:62970-63093:1:exon
so has part: feature:63856-64051:1:exon
so has part: feature:65692-65857:1:exon
so has part: feature:66148-66286:1:exon
so has part: feature:67531-67598:1:exon
so has part: feature:67987-68162:1:exon
so has part: feature:68256-68372:1:exon
so has part: feature:68718-68830:1:exon
so has part: feature:69376-69546:1:exon
so has part: feature:70610-70747:1:exon
so has part: feature:70892-71030:1:exon
so has part: feature:71169-71281:1:exon
so has part: feature:72360-72511:1:exon
so has part: feature:72965-73227:1:exon
so has part: feature:74042-74216:1:exon
so has part: feature:74847-75031:1:exon
so has part: feature:76491-76637:1:exon
so has part: feature:78776-78910:1:exon
so has part: feature:80820-80969:1:exon
so has part: feature:82453-82610:1:exon
so has part: feature:82784-82944:1:exon
so has part: feature:83603-83700:1:exon
so has part: feature:85071-85759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55172-55335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59772-59961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60949-61140:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:62146-62260:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62970-63093:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63856-64051:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:65692-65857:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:66148-66286:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67531-67598:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67987-68162:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68256-68372:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:68718-68830:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:69376-69546:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:70610-70747:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:70892-71030:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71169-71281:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72360-72511:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:72965-73227:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:74042-74216:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:74847-75031:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:76491-76637:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:78776-78910:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:80820-80969:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:82453-82610:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:82784-82944:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:83603-83700:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:85071-85759:1:exon

oplah
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: oplah
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-oxoprolinase
translation: MAETQGKFDFAIDRGGTFTDVFARLPDGSERVLKLLSRDPQNYKDAPTEGIRRVLEEETGRMFPREQPVDTSLIGWIRMGTTVATNALLEREGERTALMVTQGFKDLLHIGTQARPKLFDLEVAVPDVLYEEVIEVAERVVLVQDGCQLPRKGPRRLVTGSTGDSLEVWRELDLDLVEKDLKGVLSRGITSLAVLLLHSYTWSDHEKAVGALALRLGFSQVSLSSQVMPMVRAVPRGYTVCADAYLTPKIHQYLKGFTSGFKGGLKDVDVLFMQSDGGLTPMDQFCGSRAVLSGPAGGVVGYAITSYNQMEKKAVIGFDMGGTSTDVSRYAGQYEHVFEATTAGVTLQAPQLDINTVAAGGGSRLFFRSGMFVVGPESAGAHPGPACYRKGGPLTVTDANLALGRLLPSFFPKIFGPGENEALSSEETMKHFHRLSKEINSFLSSKQSQVITNGANGSGPEMSVEEVAMGFIRVANEAMCRPIRALTQAKGHDTSQHVLACFGGAGGQHACAIARALGMKTVFIHKYSGVLSAYGLALADVVEEEQEPCSLQYEQQAFRDLNRRVEQLSERCRETLCARGFSSSQISLEVFLHLRYKGTDCALMVTADGHPANAQSCAAGDFRSAFTKRYLKEFGFTIPDRPIMVDDIRVRGCGKSGIKSVYKTKTGRGQANPVTMTKCYFEEGYLDTGVYLWEELPSGHSIKGPAIIIDKNSTILVEPCCEARLTAGGDVCMTVGSDPHCALGTELNTVQLSIFSHRFMSIAEQMGRVLQRTSISTNIKERLDFSCAVFGPDGGLVSNAPHIPVHLGAMQETVQFQIRSLGNTLREGDVILSNHPCAGGSHLPDLTVITPVFRKGVSSPVFFVASRGHHADIGGITPGSMPPHSTSLQQEGAVFISFKLVTGGVFQEEAVTEALMAPAQYPESSGTRNLHDNLSDLRAQVAANRRGSQLVGELIDSYGLAVVQAYMGYIQSNAELAVRDMLRDFARRRRQETGSLDVEAEDFMDDGTAIRLRVQINETEGSAVFDFTGTGTEVWGNCNAPRAITLSALIYCLRCMVGQDIPLNQGCLAPIKVVIPPGSILQPSQNAAVVGGNVLTSQRVVDVIFRAFEVCAASQGCMNNISFGSESVGYYETVAGGAGAGPGWRGRSGVHSHMTNTRITDPEILEKRYPVILEHFSLRPGSGGAGKYCGGDGVVRKLLFRNQVVLSVLTERRSTRPYGLQGGEDGSSGLNLLHRADGRVLNLGGKTSVSLQPGDMFCLYTPGGGGYGREGDTNGNPQTKRRRLDDSFPERGSVFEYRMAQEGV
SIO_010081: oplah
subclass of: SO_0000673
so part of: oplah
location: join(59791..59961,60949..61140,62146..62260,62970..63093,63856..64051,65692..65857,66148..66286,67531..67598,67987..68162,68256..68372,68718..68830,69376..69546,70610..70747,70892..71030,71169..71281,72360..72511,72965..73227,74042..74216,74847..75031,76491..76637,78776..78910,80820..80969,82453..82610,82784..82944,83603..83700,85071..85223)
location: region:59791-85223:1
so has part: feature:59791-59961:1:exon
so has part: feature:60949-61140:1:exon
so has part: feature:62146-62260:1:exon
so has part: feature:62970-63093:1:exon
so has part: feature:63856-64051:1:exon
so has part: feature:65692-65857:1:exon
so has part: feature:66148-66286:1:exon
so has part: feature:67531-67598:1:exon
so has part: feature:67987-68162:1:exon
so has part: feature:68256-68372:1:exon
so has part: feature:68718-68830:1:exon
so has part: feature:69376-69546:1:exon
so has part: feature:70610-70747:1:exon
so has part: feature:70892-71030:1:exon
so has part: feature:71169-71281:1:exon
so has part: feature:72360-72511:1:exon
so has part: feature:72965-73227:1:exon
so has part: feature:74042-74216:1:exon
so has part: feature:74847-75031:1:exon
so has part: feature:76491-76637:1:exon
so has part: feature:78776-78910:1:exon
so has part: feature:80820-80969:1:exon
so has part: feature:82453-82610:1:exon
so has part: feature:82784-82944:1:exon
so has part: feature:83603-83700:1:exon
so has part: feature:85071-85223:1:exon

XP_033964817.1
type: Protein
SIO_000068: ncbiprotein

position:59791:1
position: 59791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85223:1
position: 85223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59791-59961:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60949-61140:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:62146-62260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:62970-63093:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63856-64051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:65692-65857:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:66148-66286:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:67531-67598:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67987-68162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:68256-68372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68718-68830:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69376-69546:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:70610-70747:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:70892-71030:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:71169-71281:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:72360-72511:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72965-73227:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:74042-74216:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:74847-75031:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:76491-76637:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:78776-78910:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:80820-80969:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:82453-82610:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:82784-82944:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:83603-83700:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:85071-85223:1:exon

oplah
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: oplah
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-oxoprolinase
translation: MAETQGKFDFAIDRGGTFTDVFARLPDGSERVLKLLSRDPQNYKDAPTEGIRRVLEEETGRMFPREQPVDTSLIGWIRMGTTVATNALLEREGERTALMVTQGFKDLLHIGTQARPKLFDLEVAVPDVLYEEVIEVAERVVLVQDGCQLPRKGPRRLVTGSTGDSLEVWRELDLDLVEKDLKGVLSRGITSLAVLLLHSYTWSDHEKAVGALALRLGFSQVSLSSQVMPMVRAVPRGYTVCADAYLTPKIHQYLKGFTSGFKGGLKDVDVLFMQSDGGLTPMDQFCGSRAVLSGPAGGVVGYAITSYNQMEKKAVIGFDMGGTSTDVSRYAGQYEHVFEATTAGVTLQAPQLDINTVAAGGGSRLFFRSGMFVVGPESAGAHPGPACYRKGGPLTVTDANLALGRLLPSFFPKIFGPGENEALSSEETMKHFHRLSKEINSFLSSKQSQVITNGANGSGPEMSVEEVAMGFIRVANEAMCRPIRALTQAKGHDTSQHVLACFGGAGGQHACAIARALGMKTVFIHKYSGVLSAYGLALADVVEEEQEPCSLQYEQQAFRDLNRRVEQLSERCRETLCARGFSSSQISLEVFLHLRYKGTDCALMVTADGHPANAQSCAAGDFRSAFTKRYLKEFGFTIPDRPIMVDDIRVRGCGKSGIKSVYKTKTGRGQANPVTMTKCYFEEGYLDTGVYLWEELPSGHSIKGPAIIIDKNSTILVEPCCEARLTAGGDVCMTVGSDPHCALGTELNTVQLSIFSHRFMSIAEQMGRVLQRTSISTNIKERLDFSCAVFGPDGGLVSNAPHIPVHLGAMQETVQFQIRSLGNTLREGDVILSNHPCAGGSHLPDLTVITPVFRKGVSSPVFFVASRGHHADIGGITPGSMPPHSTSLQQEGAVFISFKLVTGGVFQEEAVTEALMAPAQYPESSGTRNLHDNLSDLRAQVAANRRGSQLVGELIDSYGLAVVQAYMGYIQSNAELAVRDMLRDFARRRRQETGSLDVEAEDFMDDGTAIRLRVQINETEGSAVFDFTGTGTEVWGNCNAPRAITLSALIYCLRCMVGQDIPLNQGCLAPIKVVIPPGSILQPSQNAAVVGGNVLTSQRVVDVIFRAFEVCAASQGCMNNISFGSESVGYYETVAGGAGAGPGWRGRSGVHSHMTNTRITDPEILEKRYPVILEHFSLRPGSGGAGKYCGGDGVVRKLLFRNQVVLSVLTERRSTRPYGLQGGEDGSSGLNLLHRADGRVLNLGGKTSVSLQPGDMFCLYTPGGGGYGREGDTNGNPQTKRRRLDDSFPERGSVFEYRMAQEGV
SIO_010081: oplah
subclass of: SO_0000673
so part of: oplah
location: join(59791..59961,60949..61140,62146..62260,62970..63093,63856..64051,65692..65857,66148..66286,67531..67598,67987..68162,68256..68372,68718..68830,69376..69546,70610..70747,70892..71030,71169..71281,72360..72511,72965..73227,74042..74216,74847..75031,76491..76637,78776..78910,80820..80969,82453..82610,82784..82944,83603..83700,85071..85223)
location: region:59791-85223:1
so has part: feature:59791-59961:1:exon
so has part: feature:60949-61140:1:exon
so has part: feature:62146-62260:1:exon
so has part: feature:62970-63093:1:exon
so has part: feature:63856-64051:1:exon
so has part: feature:65692-65857:1:exon
so has part: feature:66148-66286:1:exon
so has part: feature:67531-67598:1:exon
so has part: feature:67987-68162:1:exon
so has part: feature:68256-68372:1:exon
so has part: feature:68718-68830:1:exon
so has part: feature:69376-69546:1:exon
so has part: feature:70610-70747:1:exon
so has part: feature:70892-71030:1:exon
so has part: feature:71169-71281:1:exon
so has part: feature:72360-72511:1:exon
so has part: feature:72965-73227:1:exon
so has part: feature:74042-74216:1:exon
so has part: feature:74847-75031:1:exon
so has part: feature:76491-76637:1:exon
so has part: feature:78776-78910:1:exon
so has part: feature:80820-80969:1:exon
so has part: feature:82453-82610:1:exon
so has part: feature:82784-82944:1:exon
so has part: feature:83603-83700:1:exon
so has part: feature:85071-85223:1:exon

XP_033964818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59791-59961:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60949-61140:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:62146-62260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:62970-63093:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63856-64051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:65692-65857:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:66148-66286:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:67531-67598:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67987-68162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:68256-68372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68718-68830:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69376-69546:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:70610-70747:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:70892-71030:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:71169-71281:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:72360-72511:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72965-73227:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:74042-74216:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:74847-75031:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:76491-76637:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:78776-78910:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:80820-80969:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:82453-82610:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:82784-82944:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:83603-83700:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:85071-85223:1:exon

oplah
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: oplah
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-oxoprolinase
translation: MAETQGKFDFAIDRGGTFTDVFARLPDGSERVLKLLSRDPQNYKDAPTEGIRRVLEEETGRMFPREQPVDTSLIGWIRMGTTVATNALLEREGERTALMVTQGFKDLLHIGTQARPKLFDLEVAVPDVLYEEVIEVAERVVLVQDGCQLPRKGPRRLVTGSTGDSLEVWRELDLDLVEKDLKGVLSRGITSLAVLLLHSYTWSDHEKAVGALALRLGFSQVSLSSQVMPMVRAVPRGYTVCADAYLTPKIHQYLKGFTSGFKGGLKDVDVLFMQSDGGLTPMDQFCGSRAVLSGPAGGVVGYAITSYNQMEKKAVIGFDMGGTSTDVSRYAGQYEHVFEATTAGVTLQAPQLDINTVAAGGGSRLFFRSGMFVVGPESAGAHPGPACYRKGGPLTVTDANLALGRLLPSFFPKIFGPGENEALSSEETMKHFHRLSKEINSFLSSKQSQVITNGANGSGPEMSVEEVAMGFIRVANEAMCRPIRALTQAKGHDTSQHVLACFGGAGGQHACAIARALGMKTVFIHKYSGVLSAYGLALADVVEEEQEPCSLQYEQQAFRDLNRRVEQLSERCRETLCARGFSSSQISLEVFLHLRYKGTDCALMVTADGHPANAQSCAAGDFRSAFTKRYLKEFGFTIPDRPIMVDDIRVRGCGKSGIKSVYKTKTGRGQANPVTMTKCYFEEGYLDTGVYLWEELPSGHSIKGPAIIIDKNSTILVEPCCEARLTAGGDVCMTVGSDPHCALGTELNTVQLSIFSHRFMSIAEQMGRVLQRTSISTNIKERLDFSCAVFGPDGGLVSNAPHIPVHLGAMQETVQFQIRSLGNTLREGDVILSNHPCAGGSHLPDLTVITPVFRKGVSSPVFFVASRGHHADIGGITPGSMPPHSTSLQQEGAVFISFKLVTGGVFQEEAVTEALMAPAQYPESSGTRNLHDNLSDLRAQVAANRRGSQLVGELIDSYGLAVVQAYMGYIQSNAELAVRDMLRDFARRRRQETGSLDVEAEDFMDDGTAIRLRVQINETEGSAVFDFTGTGTEVWGNCNAPRAITLSALIYCLRCMVGQDIPLNQGCLAPIKVVIPPGSILQPSQNAAVVGGNVLTSQRVVDVIFRAFEVCAASQGCMNNISFGSESVGYYETVAGGAGAGPGWRGRSGVHSHMTNTRITDPEILEKRYPVILEHFSLRPGSGGAGKYCGGDGVVRKLLFRNQVVLSVLTERRSTRPYGLQGGEDGSSGLNLLHRADGRVLNLGGKTSVSLQPGDMFCLYTPGGGGYGREGDTNGNPQTKRRRLDDSFPERGSVFEYRMAQEGV
SIO_010081: oplah
subclass of: SO_0000673
so part of: oplah
location: join(59791..59961,60949..61140,62146..62260,62970..63093,63856..64051,65692..65857,66148..66286,67531..67598,67987..68162,68256..68372,68718..68830,69376..69546,70610..70747,70892..71030,71169..71281,72360..72511,72965..73227,74042..74216,74847..75031,76491..76637,78776..78910,80820..80969,82453..82610,82784..82944,83603..83700,85071..85223)
location: region:59791-85223:1
so has part: feature:59791-59961:1:exon
so has part: feature:60949-61140:1:exon
so has part: feature:62146-62260:1:exon
so has part: feature:62970-63093:1:exon
so has part: feature:63856-64051:1:exon
so has part: feature:65692-65857:1:exon
so has part: feature:66148-66286:1:exon
so has part: feature:67531-67598:1:exon
so has part: feature:67987-68162:1:exon
so has part: feature:68256-68372:1:exon
so has part: feature:68718-68830:1:exon
so has part: feature:69376-69546:1:exon
so has part: feature:70610-70747:1:exon
so has part: feature:70892-71030:1:exon
so has part: feature:71169-71281:1:exon
so has part: feature:72360-72511:1:exon
so has part: feature:72965-73227:1:exon
so has part: feature:74042-74216:1:exon
so has part: feature:74847-75031:1:exon
so has part: feature:76491-76637:1:exon
so has part: feature:78776-78910:1:exon
so has part: feature:80820-80969:1:exon
so has part: feature:82453-82610:1:exon
so has part: feature:82784-82944:1:exon
so has part: feature:83603-83700:1:exon
so has part: feature:85071-85223:1:exon

XP_033964819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59791-59961:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60949-61140:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:62146-62260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:62970-63093:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63856-64051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:65692-65857:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:66148-66286:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:67531-67598:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67987-68162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:68256-68372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68718-68830:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69376-69546:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:70610-70747:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:70892-71030:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:71169-71281:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:72360-72511:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72965-73227:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:74042-74216:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:74847-75031:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:76491-76637:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:78776-78910:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:80820-80969:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:82453-82610:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:82784-82944:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:83603-83700:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:85071-85223:1:exon

oplah
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: oplah
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-oxoprolinase
translation: MAETQGKFDFAIDRGGTFTDVFARLPDGSERVLKLLSRDPQNYKDAPTEGIRRVLEEETGRMFPREQPVDTSLIGWIRMGTTVATNALLEREGERTALMVTQGFKDLLHIGTQARPKLFDLEVAVPDVLYEEVIEVAERVVLVQDGCQLPRKGPRRLVTGSTGDSLEVWRELDLDLVEKDLKGVLSRGITSLAVLLLHSYTWSDHEKAVGALALRLGFSQVSLSSQVMPMVRAVPRGYTVCADAYLTPKIHQYLKGFTSGFKGGLKDVDVLFMQSDGGLTPMDQFCGSRAVLSGPAGGVVGYAITSYNQMEKKAVIGFDMGGTSTDVSRYAGQYEHVFEATTAGVTLQAPQLDINTVAAGGGSRLFFRSGMFVVGPESAGAHPGPACYRKGGPLTVTDANLALGRLLPSFFPKIFGPGENEALSSEETMKHFHRLSKEINSFLSSKQSQVITNGANGSGPEMSVEEVAMGFIRVANEAMCRPIRALTQAKGHDTSQHVLACFGGAGGQHACAIARALGMKTVFIHKYSGVLSAYGLALADVVEEEQEPCSLQYEQQAFRDLNRRVEQLSERCRETLCARGFSSSQISLEVFLHLRYKGTDCALMVTADGHPANAQSCAAGDFRSAFTKRYLKEFGFTIPDRPIMVDDIRVRGCGKSGIKSVYKTKTGRGQANPVTMTKCYFEEGYLDTGVYLWEELPSGHSIKGPAIIIDKNSTILVEPCCEARLTAGGDVCMTVGSDPHCALGTELNTVQLSIFSHRFMSIAEQMGRVLQRTSISTNIKERLDFSCAVFGPDGGLVSNAPHIPVHLGAMQETVQFQIRSLGNTLREGDVILSNHPCAGGSHLPDLTVITPVFRKGVSSPVFFVASRGHHADIGGITPGSMPPHSTSLQQEGAVFISFKLVTGGVFQEEAVTEALMAPAQYPESSGTRNLHDNLSDLRAQVAANRRGSQLVGELIDSYGLAVVQAYMGYIQSNAELAVRDMLRDFARRRRQETGSLDVEAEDFMDDGTAIRLRVQINETEGSAVFDFTGTGTEVWGNCNAPRAITLSALIYCLRCMVGQDIPLNQGCLAPIKVVIPPGSILQPSQNAAVVGGNVLTSQRVVDVIFRAFEVCAASQGCMNNISFGSESVGYYETVAGGAGAGPGWRGRSGVHSHMTNTRITDPEILEKRYPVILEHFSLRPGSGGAGKYCGGDGVVRKLLFRNQVVLSVLTERRSTRPYGLQGGEDGSSGLNLLHRADGRVLNLGGKTSVSLQPGDMFCLYTPGGGGYGREGDTNGNPQTKRRRLDDSFPERGSVFEYRMAQEGV
SIO_010081: oplah
subclass of: SO_0000673
so part of: oplah
location: join(59791..59961,60949..61140,62146..62260,62970..63093,63856..64051,65692..65857,66148..66286,67531..67598,67987..68162,68256..68372,68718..68830,69376..69546,70610..70747,70892..71030,71169..71281,72360..72511,72965..73227,74042..74216,74847..75031,76491..76637,78776..78910,80820..80969,82453..82610,82784..82944,83603..83700,85071..85223)
location: region:59791-85223:1
so has part: feature:59791-59961:1:exon
so has part: feature:60949-61140:1:exon
so has part: feature:62146-62260:1:exon
so has part: feature:62970-63093:1:exon
so has part: feature:63856-64051:1:exon
so has part: feature:65692-65857:1:exon
so has part: feature:66148-66286:1:exon
so has part: feature:67531-67598:1:exon
so has part: feature:67987-68162:1:exon
so has part: feature:68256-68372:1:exon
so has part: feature:68718-68830:1:exon
so has part: feature:69376-69546:1:exon
so has part: feature:70610-70747:1:exon
so has part: feature:70892-71030:1:exon
so has part: feature:71169-71281:1:exon
so has part: feature:72360-72511:1:exon
so has part: feature:72965-73227:1:exon
so has part: feature:74042-74216:1:exon
so has part: feature:74847-75031:1:exon
so has part: feature:76491-76637:1:exon
so has part: feature:78776-78910:1:exon
so has part: feature:80820-80969:1:exon
so has part: feature:82453-82610:1:exon
so has part: feature:82784-82944:1:exon
so has part: feature:83603-83700:1:exon
so has part: feature:85071-85223:1:exon

XP_033964820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59791-59961:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60949-61140:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:62146-62260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:62970-63093:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63856-64051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:65692-65857:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:66148-66286:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:67531-67598:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67987-68162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:68256-68372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68718-68830:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69376-69546:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:70610-70747:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:70892-71030:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:71169-71281:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:72360-72511:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72965-73227:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:74042-74216:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:74847-75031:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:76491-76637:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:78776-78910:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:80820-80969:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:82453-82610:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:82784-82944:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:83603-83700:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:85071-85223:1:exon

foxh1
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: foxh1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(88172..94068)
location: region:88172-94068:-1
so has part: feature:88172-94068:-1:exon
subclass of: SO_0000010

117465861
type: Gene
SIO_000068: ncbigene

position:88172:-1
position: 88172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94068:-1
position: 94068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88172-94068:-1:exon

foxh1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: foxh1
product: forkhead box H1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034108918.1
SIO_010081: foxh1
subclass of: SO_0000673
so part of: foxh1
location: complement(join(88172..89978,90728..90832,91479..92060,93932..94068))
location: region:88172-94068:-1
so has part: feature:93932-94068:-1:exon
so has part: feature:91479-92060:-1:exon
so has part: feature:90728-90832:-1:exon
so has part: feature:88172-89978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93932-94068:-1:exon

position:93932:-1
position: 93932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:91479-92060:-1:exon

position:91479:-1
position: 91479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92060:-1
position: 92060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:90728-90832:-1:exon

position:90728:-1
position: 90728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90832:-1
position: 90832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:88172-89978:-1:exon

position:89978:-1
position: 89978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

foxh1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: foxh1
product: forkhead box H1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034108917.1
SIO_010081: foxh1
subclass of: SO_0000673
so part of: foxh1
location: complement(join(88172..89978,90728..90832,91479..92064,93932..94068))
location: region:88172-94068:-1
so has part: feature:93932-94068:-1:exon
so has part: feature:91479-92064:-1:exon
so has part: feature:90728-90832:-1:exon
so has part: feature:88172-89978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93932-94068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91479-92064:-1:exon

position:92064:-1
position: 92064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:90728-90832:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88172-89978:-1:exon

foxh1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: foxh1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein H1
translation: MTKHWPEPTISAPAALSHYGEHHDHHLDFHRDAQHSCPPHSGVARSSAAQHWPHHLAHMVPQQRLEKPTARPEHITSTTAFMDTPAPPGSDYPNQQDANFKRETISQETWNGNRETSSTSGAKKKNYQRYPKPPYSYLAMIAMVIQRSPERKLTLSEILKEISTLFPFFKGNYKGWRDSVRHNLSSYDCFVKVLKDPGKPQGKGNFWAVELSRVPLELLKRQNTAVSRQDETIFAQDLAPYILQGHKVESEPPAAPPPPLPPVTHLPIVRSRNPSPPQEDLFRPKLDSSFAIDSLLHSLRPPSASDVDVSSRDCWGRGERPRSPRPRYASSARSASASSASPASTSSSDEDWKGLSGKRVPLDGEAGSDGYEDYRPPVHKSARRDTSAPPWELPTSYAKYAPPNAVAPPSMRFNGGPLMPLHGGLPLYGYGSSPVAPGHFLGHAYWPLLPSGRVSAQTAPLLMDLDHMLQSVPPNKSVFDVLVPTNQNSHHQPPSQYTLQSGPHLNRYPQY
SIO_010081: foxh1
subclass of: SO_0000673
so part of: foxh1
location: complement(join(89019..89978,90728..90832,91479..91949))
location: region:89019-91949:-1
so has part: feature:91479-91949:-1:exon
so has part: feature:90728-90832:-1:exon
so has part: feature:89019-89978:-1:exon

XP_033964808.1
type: Protein
SIO_000068: ncbiprotein

position:89019:-1
position: 89019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91949:-1
position: 91949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91479-91949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90728-90832:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89019-89978:-1:exon

foxh1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: foxh1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein H1
translation: MTKHWPEPTISAPAALSHYGEHHDHHLDFHRDAQHSCPPHSGVARSSAAQHWPHHLAHMVPQQRLEKPTARPEHITSTTAFMDTPAPPGSDYPNQQDANFKRETISQETWNGNRETSSTSGAKKKNYQRYPKPPYSYLAMIAMVIQRSPERKLTLSEILKEISTLFPFFKGNYKGWRDSVRHNLSSYDCFVKVLKDPGKPQGKGNFWAVELSRVPLELLKRQNTAVSRQDETIFAQDLAPYILQGHKVESEPPAAPPPPLPPVTHLPIVRSRNPSPPQEDLFRPKLDSSFAIDSLLHSLRPPSASDVDVSSRDCWGRGERPRSPRPRYASSARSASASSASPASTSSSDEDWKGLSGKRVPLDGEAGSDGYEDYRPPVHKSARRDTSAPPWELPTSYAKYAPPNAVAPPSMRFNGGPLMPLHGGLPLYGYGSSPVAPGHFLGHAYWPLLPSGRVSAQTAPLLMDLDHMLQSVPPNKSVFDVLVPTNQNSHHQPPSQYTLQSGPHLNRYPQY
SIO_010081: foxh1
subclass of: SO_0000673
so part of: foxh1
location: complement(join(89019..89978,90728..90832,91479..91949))
location: region:89019-91949:-1
so has part: feature:91479-91949:-1:exon
so has part: feature:90728-90832:-1:exon
so has part: feature:89019-89978:-1:exon

XP_033964809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91479-91949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90728-90832:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89019-89978:-1:exon

ppp1r16a
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: ppp1r16a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 96837..116700
location: region:96837-116700:1
so has part: feature:96837-116700:1:exon
subclass of: SO_0000010

117465472
type: Gene
SIO_000068: ncbigene

position:96837:1
position: 96837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116700:1
position: 116700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96837-116700:1:exon

ppp1r16a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: ppp1r16a
product: protein phosphatase 1, regulatory subunit 16A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034108276.1
SIO_010081: ppp1r16a
subclass of: SO_0000673
so part of: ppp1r16a
location: join(96837..96936,106638..107611,107763..107833,109832..109977,110408..110511,110746..110870,113590..113715,113800..113875,114088..114217,114316..114478,115002..116700)
location: region:96837-116700:1
so has part: feature:96837-96936:1:exon
so has part: feature:106638-107611:1:exon
so has part: feature:107763-107833:1:exon
so has part: feature:109832-109977:1:exon
so has part: feature:110408-110511:1:exon
so has part: feature:110746-110870:1:exon
so has part: feature:113590-113715:1:exon
so has part: feature:113800-113875:1:exon
so has part: feature:114088-114217:1:exon
so has part: feature:114316-114478:1:exon
so has part: feature:115002-116700:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96837-96936:1:exon

position:96936:1
position: 96936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106638-107611:1:exon

position:106638:1
position: 106638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107611:1
position: 107611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107763-107833:1:exon

position:107763:1
position: 107763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107833:1
position: 107833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:109832-109977:1:exon

position:109832:1
position: 109832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109977:1
position: 109977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:110408-110511:1:exon

position:110408:1
position: 110408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110511:1
position: 110511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:110746-110870:1:exon

position:110746:1
position: 110746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110870:1
position: 110870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:113590-113715:1:exon

position:113590:1
position: 113590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113715:1
position: 113715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:113800-113875:1:exon

position:113800:1
position: 113800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113875:1
position: 113875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:114088-114217:1:exon

position:114088:1
position: 114088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114217:1
position: 114217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:114316-114478:1:exon

position:114316:1
position: 114316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114478:1
position: 114478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:115002-116700:1:exon

position:115002:1
position: 115002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ppp1r16a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: ppp1r16a
product: protein phosphatase 1, regulatory subunit 16A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034108278.1
SIO_010081: ppp1r16a
subclass of: SO_0000673
so part of: ppp1r16a
location: join(96837..96936,107205..107611,107763..107833,109832..109977,110408..110511,110746..110870,113590..113715,113800..113875,114088..114217,114316..114478,115002..116700)
location: region:96837-116700:1
so has part: feature:96837-96936:1:exon
so has part: feature:107205-107611:1:exon
so has part: feature:107763-107833:1:exon
so has part: feature:109832-109977:1:exon
so has part: feature:110408-110511:1:exon
so has part: feature:110746-110870:1:exon
so has part: feature:113590-113715:1:exon
so has part: feature:113800-113875:1:exon
so has part: feature:114088-114217:1:exon
so has part: feature:114316-114478:1:exon
so has part: feature:115002-116700:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96837-96936:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107205-107611:1:exon

position:107205:1
position: 107205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107763-107833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109832-109977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:110408-110511:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110746-110870:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113590-113715:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:113800-113875:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:114088-114217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:114316-114478:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:115002-116700:1:exon

ppp1r16a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: ppp1r16a
product: protein phosphatase 1, regulatory subunit 16A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034108277.1
SIO_010081: ppp1r16a
subclass of: SO_0000673
so part of: ppp1r16a
location: join(97000..97075,106638..107611,107763..107833,109832..109977,110408..110511,110746..110870,113590..113715,113800..113875,114088..114217,114316..114478,115002..116700)
location: region:97000-116700:1
so has part: feature:97000-97075:1:exon
so has part: feature:106638-107611:1:exon
so has part: feature:107763-107833:1:exon
so has part: feature:109832-109977:1:exon
so has part: feature:110408-110511:1:exon
so has part: feature:110746-110870:1:exon
so has part: feature:113590-113715:1:exon
so has part: feature:113800-113875:1:exon
so has part: feature:114088-114217:1:exon
so has part: feature:114316-114478:1:exon
so has part: feature:115002-116700:1:exon

position:97000:1
position: 97000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97000-97075:1:exon

position:97075:1
position: 97075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106638-107611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107763-107833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109832-109977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:110408-110511:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110746-110870:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113590-113715:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:113800-113875:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:114088-114217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:114316-114478:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:115002-116700:1:exon

ppp1r16a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: ppp1r16a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 16A
translation: MAAEHGELLSEMATVGRLGATERLKHAQKRRVQQLKGWAQMEKDSTRGSRAKADKKKARTIKVTFPQSITLLDAAARNDVEEVRELLNNGVSPDLVNEDGLTALHQCCIDDFVEIVQCLLDAGGCVNACDSELWTPLHAAATCGHTGLVQLLIQAGADLLAVNADGNMPYDLCEDEATLELLEMVMAEQGITQDRIDDCRGAKEKAMLADIQALVQNGVDLNAQDANGTTLLHIASANGYVSVAELLVEHRAQMEARDSDGWTPLHAASCWGQIQMVELLVAHGASLNTKSVLDETPLDVCMDEEVRAKLMDLKHKHEAIMKSQDRQKGTLQRRASSTGSRGKVVRRVSVNERSSLYRREHHKEAMVWQERGRQPESQDEDEDRQTDNELHRHATMVAGVGATSRLEELDSADRSAVSSLGNGGTSLSPASSVPGEVWSGGGLMDRSASYQLSPSEGEGEGEGADSMTREKSHQTLADLKRQRAAAKLNKYPAPQPPLPPALEEEPAAELTPPQAQREVQTAPPPAEELASPSQVYFTPASGDPPLLKLRAPEEEQSNNKEPCCGLM
SIO_010081: ppp1r16a
subclass of: SO_0000673
so part of: ppp1r16a
location: join(107365..107611,107763..107833,109832..109977,110408..110511,110746..110870,113590..113715,113800..113875,114088..114217,114316..114478,115002..115517)
location: region:107365-115517:1
so has part: feature:107365-107611:1:exon
so has part: feature:107763-107833:1:exon
so has part: feature:109832-109977:1:exon
so has part: feature:110408-110511:1:exon
so has part: feature:110746-110870:1:exon
so has part: feature:113590-113715:1:exon
so has part: feature:113800-113875:1:exon
so has part: feature:114088-114217:1:exon
so has part: feature:114316-114478:1:exon
so has part: feature:115002-115517:1:exon

XP_033964167.1
type: Protein
SIO_000068: ncbiprotein

position:107365:1
position: 107365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115517:1
position: 115517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107365-107611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107763-107833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109832-109977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:110408-110511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:110746-110870:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113590-113715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113800-113875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114088-114217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:114316-114478:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:115002-115517:1:exon

ppp1r16a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: ppp1r16a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 16A
translation: MAAEHGELLSEMATVGRLGATERLKHAQKRRVQQLKGWAQMEKDSTRGSRAKADKKKARTIKVTFPQSITLLDAAARNDVEEVRELLNNGVSPDLVNEDGLTALHQCCIDDFVEIVQCLLDAGGCVNACDSELWTPLHAAATCGHTGLVQLLIQAGADLLAVNADGNMPYDLCEDEATLELLEMVMAEQGITQDRIDDCRGAKEKAMLADIQALVQNGVDLNAQDANGTTLLHIASANGYVSVAELLVEHRAQMEARDSDGWTPLHAASCWGQIQMVELLVAHGASLNTKSVLDETPLDVCMDEEVRAKLMDLKHKHEAIMKSQDRQKGTLQRRASSTGSRGKVVRRVSVNERSSLYRREHHKEAMVWQERGRQPESQDEDEDRQTDNELHRHATMVAGVGATSRLEELDSADRSAVSSLGNGGTSLSPASSVPGEVWSGGGLMDRSASYQLSPSEGEGEGEGADSMTREKSHQTLADLKRQRAAAKLNKYPAPQPPLPPALEEEPAAELTPPQAQREVQTAPPPAEELASPSQVYFTPASGDPPLLKLRAPEEEQSNNKEPCCGLM
SIO_010081: ppp1r16a
subclass of: SO_0000673
so part of: ppp1r16a
location: join(107365..107611,107763..107833,109832..109977,110408..110511,110746..110870,113590..113715,113800..113875,114088..114217,114316..114478,115002..115517)
location: region:107365-115517:1
so has part: feature:107365-107611:1:exon
so has part: feature:107763-107833:1:exon
so has part: feature:109832-109977:1:exon
so has part: feature:110408-110511:1:exon
so has part: feature:110746-110870:1:exon
so has part: feature:113590-113715:1:exon
so has part: feature:113800-113875:1:exon
so has part: feature:114088-114217:1:exon
so has part: feature:114316-114478:1:exon
so has part: feature:115002-115517:1:exon

XP_033964168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107365-107611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107763-107833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109832-109977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:110408-110511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:110746-110870:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113590-113715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113800-113875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114088-114217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:114316-114478:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:115002-115517:1:exon

ppp1r16a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: ppp1r16a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 16A
translation: MAAEHGELLSEMATVGRLGATERLKHAQKRRVQQLKGWAQMEKDSTRGSRAKADKKKARTIKVTFPQSITLLDAAARNDVEEVRELLNNGVSPDLVNEDGLTALHQCCIDDFVEIVQCLLDAGGCVNACDSELWTPLHAAATCGHTGLVQLLIQAGADLLAVNADGNMPYDLCEDEATLELLEMVMAEQGITQDRIDDCRGAKEKAMLADIQALVQNGVDLNAQDANGTTLLHIASANGYVSVAELLVEHRAQMEARDSDGWTPLHAASCWGQIQMVELLVAHGASLNTKSVLDETPLDVCMDEEVRAKLMDLKHKHEAIMKSQDRQKGTLQRRASSTGSRGKVVRRVSVNERSSLYRREHHKEAMVWQERGRQPESQDEDEDRQTDNELHRHATMVAGVGATSRLEELDSADRSAVSSLGNGGTSLSPASSVPGEVWSGGGLMDRSASYQLSPSEGEGEGEGADSMTREKSHQTLADLKRQRAAAKLNKYPAPQPPLPPALEEEPAAELTPPQAQREVQTAPPPAEELASPSQVYFTPASGDPPLLKLRAPEEEQSNNKEPCCGLM
SIO_010081: ppp1r16a
subclass of: SO_0000673
so part of: ppp1r16a
location: join(107365..107611,107763..107833,109832..109977,110408..110511,110746..110870,113590..113715,113800..113875,114088..114217,114316..114478,115002..115517)
location: region:107365-115517:1
so has part: feature:107365-107611:1:exon
so has part: feature:107763-107833:1:exon
so has part: feature:109832-109977:1:exon
so has part: feature:110408-110511:1:exon
so has part: feature:110746-110870:1:exon
so has part: feature:113590-113715:1:exon
so has part: feature:113800-113875:1:exon
so has part: feature:114088-114217:1:exon
so has part: feature:114316-114478:1:exon
so has part: feature:115002-115517:1:exon

XP_033964169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107365-107611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107763-107833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109832-109977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:110408-110511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:110746-110870:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113590-113715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113800-113875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114088-114217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:114316-114478:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:115002-115517:1:exon

si:ch211-217a12.1
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: si:ch211-217a12.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 119418..140045
location: region:119418-140045:1
so has part: feature:119418-140045:1:exon
subclass of: SO_0000010

117465937
type: Gene
SIO_000068: ncbigene

position:119418:1
position: 119418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140045:1
position: 140045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119418-140045:1:exon

si:ch211-217a12.1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: si:ch211-217a12.1
product: alanine aminotransferase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_034109044.1
SIO_010081: si:ch211-217a12.1
subclass of: SO_0000673
so part of: si:ch211-217a12.1
location: join(119418..119529,119870..120029,126261..126350,127180..127288,130003..130136,134358..134601,135080..135159,135674..135810,136502..136676,136939..137094,139263..139375,139483..140045)
location: region:119418-140045:1
so has part: feature:119418-119529:1:exon
so has part: feature:119870-120029:1:exon
so has part: feature:126261-126350:1:exon
so has part: feature:127180-127288:1:exon
so has part: feature:130003-130136:1:exon
so has part: feature:134358-134601:1:exon
so has part: feature:135080-135159:1:exon
so has part: feature:135674-135810:1:exon
so has part: feature:136502-136676:1:exon
so has part: feature:136939-137094:1:exon
so has part: feature:139263-139375:1:exon
so has part: feature:139483-140045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119418-119529:1:exon

position:119529:1
position: 119529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119870-120029:1:exon

position:119870:1
position: 119870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120029:1
position: 120029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:126261-126350:1:exon

position:126261:1
position: 126261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126350:1
position: 126350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:127180-127288:1:exon

position:127180:1
position: 127180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127288:1
position: 127288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:130003-130136:1:exon

position:130003:1
position: 130003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130136:1
position: 130136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:134358-134601:1:exon

position:134358:1
position: 134358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134601:1
position: 134601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:135080-135159:1:exon

position:135080:1
position: 135080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135159:1
position: 135159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:135674-135810:1:exon

position:135674:1
position: 135674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135810:1
position: 135810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:136502-136676:1:exon

position:136502:1
position: 136502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136676:1
position: 136676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:136939-137094:1:exon

position:136939:1
position: 136939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137094:1
position: 137094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:139263-139375:1:exon

position:139263:1
position: 139263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139375:1
position: 139375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:139483-140045:1:exon

position:139483:1
position: 139483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:ch211-217a12.1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: si:ch211-217a12.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alanine aminotransferase 2-like
translation: MSQQAMNGLGGKVLTLENMNPNVRKVEYAVRGAIVQRALQIEKELKEGVKKPFTEVIKANIGDAHAMGQKPITFFRQVLALCAYPDLLEDKKFPEDAKQRARRILGACGGHSIGAYSASQGIECIRQDVSRYIEKRDGGIPSNPDNIYLSTGASDAIVTMLKLLVCGEGPDRTGVMISIPQYPLYSAALADLAAVQINYYLDEDRCWGLDVAELKRALSAARTHCNPRVICIINPGNPTGQVQSRKCIEDVIRFAKEEHLFLMADEVYQDNVYAEDCKFHSFKKVLFEMGPEFSSTVEMASFHSTSKCYMGECGFRGGYMEVINMDPEVKAQLTKLVSVRLCPPVTGQALLELVVNPPQPDEPSYSTFMKERTEVLAALAEKAGLTEKTFNTVPGIICNPVQGAMYTFPRITLPQRAIDTAKEEGLAPDMLYCMRLLEEEGICLVPGSGFGQKEGTFHFRMTILPPTEKLKVVLQKIRDFHVRFTKQFS
SIO_010081: si:ch211-217a12.1
subclass of: SO_0000673
so part of: si:ch211-217a12.1
location: join(119889..120029,126261..126350,127180..127288,130003..130136,134358..134601,135080..135159,135674..135810,136502..136676,136939..137094,139263..139375,139483..139573)
location: region:119889-139573:1
so has part: feature:119889-120029:1:exon
so has part: feature:126261-126350:1:exon
so has part: feature:127180-127288:1:exon
so has part: feature:130003-130136:1:exon
so has part: feature:134358-134601:1:exon
so has part: feature:135080-135159:1:exon
so has part: feature:135674-135810:1:exon
so has part: feature:136502-136676:1:exon
so has part: feature:136939-137094:1:exon
so has part: feature:139263-139375:1:exon
so has part: feature:139483-139573:1:exon

XP_033964935.1
type: Protein
SIO_000068: ncbiprotein

position:119889:1
position: 119889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139573:1
position: 139573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119889-120029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126261-126350:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127180-127288:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130003-130136:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134358-134601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:135080-135159:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135674-135810:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:136502-136676:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:136939-137094:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:139263-139375:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139483-139573:1:exon

pdia4
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: pdia4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(140084..147735)
location: region:140084-147735:-1
so has part: feature:140084-147735:-1:exon
subclass of: SO_0000010

117465936
type: Gene
SIO_000068: ncbigene

position:140084:-1
position: 140084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147735:-1
position: 147735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140084-147735:-1:exon

pdia4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: pdia4
product: protein disulfide isomerase family A, member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_034109042.1
SIO_010081: pdia4
subclass of: SO_0000673
so part of: pdia4
location: complement(join(140084..140709,140918..141151,141976..142132,142297..142448,143167..143325,143726..143931,145749..145887,145980..146185,146282..146456,147491..147735))
location: region:140084-147735:-1
so has part: feature:147491-147735:-1:exon
so has part: feature:146282-146456:-1:exon
so has part: feature:145980-146185:-1:exon
so has part: feature:145749-145887:-1:exon
so has part: feature:143726-143931:-1:exon
so has part: feature:143167-143325:-1:exon
so has part: feature:142297-142448:-1:exon
so has part: feature:141976-142132:-1:exon
so has part: feature:140918-141151:-1:exon
so has part: feature:140084-140709:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147491-147735:-1:exon

position:147491:-1
position: 147491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146282-146456:-1:exon

position:146282:-1
position: 146282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146456:-1
position: 146456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:145980-146185:-1:exon

position:145980:-1
position: 145980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146185:-1
position: 146185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:145749-145887:-1:exon

position:145749:-1
position: 145749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145887:-1
position: 145887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:143726-143931:-1:exon

position:143726:-1
position: 143726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143931:-1
position: 143931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:143167-143325:-1:exon

position:143167:-1
position: 143167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143325:-1
position: 143325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:142297-142448:-1:exon

position:142297:-1
position: 142297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142448:-1
position: 142448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:141976-142132:-1:exon

position:141976:-1
position: 141976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142132:-1
position: 142132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:140918-141151:-1:exon

position:140918:-1
position: 140918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141151:-1
position: 141151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:140084-140709:-1:exon

position:140709:-1
position: 140709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pdia4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: pdia4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein disulfide-isomerase A4
translation: MKKLALLLLVLLGVAHFATLSQCEDDVTEEKQEADEEDSDDEEEDVEDDTEVKEENGVTVLNNNNFDTFMEGKDTVLVEFYAPWCGHCKQFVSEYEKIALALKENDPPIHVAKVDATVANKIATKLEVSGYPTFKIMKNGEAVDYDGERTEKAIVARVKEVAQPDWKPPPEATLVLTKDNFDEIVNNADIILVEFYAPWCGHCKSLAPEYEKAAKDLSQRSPPIPLAKVDGTIESELASRFDVTGYPTIMIFRRGKRFDFNGPRQHQGIVDYMGEQAGPPSQQVQAVKQVQDLIKDGDDAVIVGVFSSEQDAAYEIYIEACNSLREDFTFRHSFSSEVTTLLKASPGQIVTSHPEKFRSKYEPASHTLAVEDSTAVSEVQEFFKKHVIPLVGHRKPANDAKRYTNRPLVVVYYGVDFSFDFRKATQFWRSKVLEVAKDFPEYTFAIGDEEDYAEELKSLGLGDSGEEVNVGILADGGKKFAMDPEEFDADVLRDFVKAFKKGKLSPIIKSQPLPKNNKGPVKVVVGKTFDEIVMDTQKDVLIEFYAPWCGHCKKLEPDYVALGKKYKGEKNLVIAKMDATANDVPNENYKTEGFPTIYLALSNSKQSPIKFEGGDRTLEGFSNFLEKHVPKLSQKRDEL
SIO_010081: pdia4
subclass of: SO_0000673
so part of: pdia4
location: complement(join(140294..140709,140918..141151,141976..142132,142297..142448,143167..143325,143726..143931,145749..145887,145980..146185,146282..146456,147491..147566))
location: region:140294-147566:-1
so has part: feature:147491-147566:-1:exon
so has part: feature:146282-146456:-1:exon
so has part: feature:145980-146185:-1:exon
so has part: feature:145749-145887:-1:exon
so has part: feature:143726-143931:-1:exon
so has part: feature:143167-143325:-1:exon
so has part: feature:142297-142448:-1:exon
so has part: feature:141976-142132:-1:exon
so has part: feature:140918-141151:-1:exon
so has part: feature:140294-140709:-1:exon

XP_033964933.1
type: Protein
SIO_000068: ncbiprotein

position:140294:-1
position: 140294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147566:-1
position: 147566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147491-147566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146282-146456:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145980-146185:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145749-145887:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143726-143931:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:143167-143325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:142297-142448:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:141976-142132:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:140918-141151:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:140294-140709:-1:exon

LOC117466003
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(155080..160004)
location: region:155080-160004:-1
so has part: feature:155080-160004:-1:exon
subclass of: SO_0000010

117466003
type: Gene
SIO_000068: ncbigene

position:155080:-1
position: 155080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160004:-1
position: 160004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155080-160004:-1:exon

LOC117466003
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117466003
product: polycystic kidney disease 1 like 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034109132.1
SIO_010081: LOC117466003
subclass of: SO_0000673
so part of: LOC117466003
location: complement(join(155080..155764,156990..157163,158993..159097,159644..159872,159991..160004))
location: region:155080-160004:-1
so has part: feature:159991-160004:-1:exon
so has part: feature:159644-159872:-1:exon
so has part: feature:158993-159097:-1:exon
so has part: feature:156990-157163:-1:exon
so has part: feature:155080-155764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159991-160004:-1:exon

position:159991:-1
position: 159991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:159644-159872:-1:exon

position:159644:-1
position: 159644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159872:-1
position: 159872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:158993-159097:-1:exon

position:158993:-1
position: 158993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159097:-1
position: 159097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:156990-157163:-1:exon

position:156990:-1
position: 156990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157163:-1
position: 157163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:155080-155764:-1:exon

position:155764:-1
position: 155764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117466003
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117466003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycystic kidney disease 1 like 1-like
translation: MSYRMSAAASKLKLLQSDGWLDGHTVSLHFTLFSPAPHLFTSVSLHTEQSPPAGLLPSARVQSVGGCHSPAVGEYGVMVCQLLFLVLSLLQLCYQVYAVGEQGLMGYWRTPCNRLECIRSLRGVTLFLLTMKSVTALRVNSSDSLHQTLPSKAHRYPEDSPALSHTQEINMHAQVRA
SIO_010081: LOC117466003
subclass of: SO_0000673
so part of: LOC117466003
location: complement(join(155753..155764,156990..157163,158993..159097,159644..159872,159991..160004))
location: region:155753-160004:-1
so has part: feature:159991-160004:-1:exon
so has part: feature:159644-159872:-1:exon
so has part: feature:158993-159097:-1:exon
so has part: feature:156990-157163:-1:exon
so has part: feature:155753-155764:-1:exon

XP_033965023.1
type: Protein
SIO_000068: ncbiprotein

position:155753:-1
position: 155753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159991-160004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:159644-159872:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158993-159097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156990-157163:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:155753-155764:-1:exon

LOC117465876
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 168261..170471
location: region:168261-170471:1
so has part: feature:168261-170471:1:exon
subclass of: SO_0000010

117465876
type: Gene
SIO_000068: ncbigene

position:168261:1
position: 168261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170471:1
position: 170471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168261-170471:1:exon

LOC117465876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465876
product: DNA ligase 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034108942.1
SIO_010081: LOC117465876
subclass of: SO_0000673
so part of: LOC117465876
location: 168261..170471
location: region:168261-170471:1
so has part: feature:168261-170471:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:168261-170471:1:exon

LOC117465876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA ligase 1-like
translation: MDRTKSDQSSKETSHSQHDESLLQFDAETVKLLVMRGDELFECVTVCEERYGALEERYDALEERYGALEEEMEAKEARHKQQLDENLVTINLLKRREEELLQSQEKSTKDLAEKQQSWESGKQGMKHVVDENNHQAARNHTLETEKQKLEWKVKGVMKHNSQQTFRIHTLEKEVHQLVLQLEKQGEKNSEDQQPMEAKLKEVEKENEDLAKKNLSCETELKQVEATLKEVEKENEDLAKKNLSCETELKQVEATLKEVEKENEDLAKKNTSWETDVKQLKDQMREKEDKFSKDLAEEQLSWESEKHQLEGERREMETTLKQVEESKKKLAEENRSLEMDVTLNVRLVKQFEKDMEVQREEFSERHQSWETKASSMETEIKEVTQEKEDLAQTLQSQATELKDIQAQLHQAEDESNLSWETKVQQLEEEMKEQKEKCSKDLSQKHQSWEATVHLMETRLKEAKEERDDLAQTRLSWETKEMKMEDEKTLLEDLCLHMKNKSRGFFAHRRATEERDVVLQKMLRKMQEKEMRKKAKGEKEEKEEAGRQ
SIO_010081: LOC117465876
subclass of: SO_0000673
so part of: LOC117465876
location: 168473..170113
location: region:168473-170113:1
so has part: feature:168473-170113:1:exon

XP_033964833.1
type: Protein
SIO_000068: ncbiprotein

position:168473:1
position: 168473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170113:1
position: 170113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168473-170113:1:exon

LOC117465820
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465820
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 193284..195668
location: region:193284-195668:1
so has part: feature:193284-195668:1:exon
subclass of: SO_0000010

117465820
type: Gene
SIO_000068: ncbigene

position:193284:1
position: 193284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195668:1
position: 195668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193284-195668:1:exon

LOC117465820
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465820
product: uncharacterized LOC117465820
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_034108856.1
SIO_010081: LOC117465820
subclass of: SO_0000673
so part of: LOC117465820
location: join(193284..193371,193446..193556,193702..193767,193859..193947,194148..194253,194333..194438,194513..195668)
location: region:193284-195668:1
so has part: feature:193284-193371:1:exon
so has part: feature:193446-193556:1:exon
so has part: feature:193702-193767:1:exon
so has part: feature:193859-193947:1:exon
so has part: feature:194148-194253:1:exon
so has part: feature:194333-194438:1:exon
so has part: feature:194513-195668:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193284-193371:1:exon

position:193371:1
position: 193371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:193446-193556:1:exon

position:193446:1
position: 193446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193556:1
position: 193556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:193702-193767:1:exon

position:193702:1
position: 193702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193767:1
position: 193767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:193859-193947:1:exon

position:193859:1
position: 193859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193947:1
position: 193947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:194148-194253:1:exon

position:194148:1
position: 194148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194253:1
position: 194253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:194333-194438:1:exon

position:194333:1
position: 194333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194438:1
position: 194438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:194513-195668:1:exon

position:194513:1
position: 194513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117465820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465820
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117465820
translation: MDLAPGKWLEGEIVNSYITMVGRKAGALTLDSYLMTSLWEGTHKGSLRSLDLLKYDVAVGAVCSHGHWTLIIMYLKERRSLFVDPFGATDAQIQKCKDVTRALVRKKCPKIGRWACATVAHPKQQDSSACGVFVCKLAEQILSGQNIDYAVDQKGVAMLRLDMSMSLVTNSDDLSQLCRACGELSSGAEGDIDTWVCREIHVLLLEDWDAPWIGYLNITG
SIO_010081: LOC117465820
subclass of: SO_0000673
so part of: LOC117465820
location: join(193336..193371,193446..193556,193702..193767,193859..193947,194148..194253,194333..194438,194513..194661)
location: region:193336-194661:1
so has part: feature:193336-193371:1:exon
so has part: feature:193446-193556:1:exon
so has part: feature:193702-193767:1:exon
so has part: feature:193859-193947:1:exon
so has part: feature:194148-194253:1:exon
so has part: feature:194333-194438:1:exon
so has part: feature:194513-194661:1:exon

XP_033964747.1
type: Protein
SIO_000068: ncbiprotein

position:193336:1
position: 193336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194661:1
position: 194661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193336-193371:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193446-193556:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193702-193767:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193859-193947:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194148-194253:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:194333-194438:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:194513-194661:1:exon

LOC117465537
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(201754..204080)
location: region:201754-204080:-1
so has part: feature:201754-204080:-1:exon
subclass of: SO_0000010

117465537
type: Gene
SIO_000068: ncbigene

position:201754:-1
position: 201754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204080:-1
position: 204080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201754-204080:-1:exon

LOC117465537
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465537
product: DNA ligase 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034108393.1
SIO_010081: LOC117465537
subclass of: SO_0000673
so part of: LOC117465537
location: complement(join(201754..203595,203638..204080))
location: region:201754-204080:-1
so has part: feature:203638-204080:-1:exon
so has part: feature:201754-203595:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203638-204080:-1:exon

position:203638:-1
position: 203638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:201754-203595:-1:exon

position:203595:-1
position: 203595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117465537
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465537
product: DNA ligase 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034108395.1
SIO_010081: LOC117465537
subclass of: SO_0000673
so part of: LOC117465537
location: complement(join(201754..203093,203178..204080))
location: region:201754-204080:-1
so has part: feature:203178-204080:-1:exon
so has part: feature:201754-203093:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203178-204080:-1:exon

position:203178:-1
position: 203178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:201754-203093:-1:exon

position:203093:-1
position: 203093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117465537
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465537
product: DNA ligase 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034108394.1
SIO_010081: LOC117465537
subclass of: SO_0000673
so part of: LOC117465537
location: complement(join(201754..203078,203163..204080))
location: region:201754-204080:-1
so has part: feature:203163-204080:-1:exon
so has part: feature:201754-203078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203163-204080:-1:exon

position:203163:-1
position: 203163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:201754-203078:-1:exon

position:203078:-1
position: 203078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117465537
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IgA receptor-like isoform X1
translation: MDRTKSDQSSKETSHSQHDESLLQFDAETVKLLVMRGDELFECVTVCEERYGALEERYGALEEEMEAKEARHKQQLDENLVTINLLKRREEELLQSQEKSTKDLAEKQQSWESGKQGMKHVVDENNHQAARNHTLETEKQKLEWKVKGVMKHNSQQTFRIHTLEKEVHQLVLQLEKQGEKNSEDQQPMEAKLKEVEKENEDLAKKYLSCETELKQVEAKLKEVEKEKDDLAKKNLSCETELKQVEATLKEVEKENEDLAKKNTSWETDVKQLKDQMREKEEKFSKDLAENQLSWESEKHQLEGERREMETTLKQVEESKKKLAEENRSLEMDVTLNVRLVKQFEKDMEVQREEFSERHQSWETKASSMETDIKEVTQEKEDLAQTLQSQATELKDIQAQLHQAEDESNLSWETKVQQLEEEMKEQKEKCSKDLSQKHQSWEATVHLMETRLKEAKEERDDLAQTRLSWETKEMKMEDEKTLLEDLCLHMKNKSRGFFAHRRATEERDVVLQKMLRKMQEKEMRKKAKGEKEEKEEAGRQ
SIO_010081: LOC117465537
subclass of: SO_0000673
so part of: LOC117465537
location: complement(join(202125..203595,203638..203786))
location: region:202125-203786:-1
so has part: feature:203638-203786:-1:exon
so has part: feature:202125-203595:-1:exon

XP_033964284.1
type: Protein
SIO_000068: ncbiprotein

position:202125:-1
position: 202125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203786:-1
position: 203786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203638-203786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:202125-203595:-1:exon

LOC117465537
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA ligase 1-like isoform X3
translation: MDRTKSDQSSKETSHSQHDESLLQFDAETVKLLVMRGDELFECVTVCEERYGALEERYGALEERYGALEERYGALEEEMEAKEARHKQQLDENLVTINLLKRREEELLQSQEKSTKDLAEKQQSWESGKQGMKHVVDENNHQAARNHTLETEKQKLEWKVKGVMKHNSQQTFRIHTLEKEVHQLVLQLEKQGEKNSEDQQPMEAKLKEVEKEKDDLAKKNLSCETELKQVEATLKEVEKENEDLAKKNTSWETDVKQLKDQMREKEEKFSKDLAENQLSWESEKHQLEGERREMETTLKQVEESKKKLAEENRSLEMDVTLNVRLVKQFEKDMEVQREEFSERHQSWETKASSMETDIKEVTQEKEDLAQTLQSQATELKDIQAQLHQAEDESNLSWETKVQQLEEEMKEQKEKCSKDLSQKHQSWEATVHLMETRLKEAKEERDDLAQTRLSWETKEMKMEDEKTLLEDLCLHMKNKSRGFFAHRRATEERDVVLQKMLRKMQEKEMRKKAKGEKEEKEEAGRQ
SIO_010081: LOC117465537
subclass of: SO_0000673
so part of: LOC117465537
location: complement(join(202125..203093,203178..203786))
location: region:202125-203786:-1
so has part: feature:203178-203786:-1:exon
so has part: feature:202125-203093:-1:exon

XP_033964286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203178-203786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:202125-203093:-1:exon

LOC117465537
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA ligase 1-like isoform X2
translation: MDRTKSDQSSKETSHSQHDESLLQFDAETVKLLVMRGDELFECVTVCEERYGALEERYGALEERYGALEERYGALEEEMEAKEARHKQQLDENLVTINLLKRREEELLQSQEKSTKDLAEKQQSWESGKQGMKHVVDENNHQAARNHTLETEKQKLEWKVKGVMKHNSQQTFRIHTLEKEVHQLVLQLEKQGEKNSEDQQPMEAKLKEVEKEKDDLAKKNLSCETELKQVEATLKEVEKENEDLAKKNTSWETDVKQLKDQMREKEEKFSKDLAENQLSWESEKHQLEGERREMETTLKQVEESKKKLAEENRSLEMDVTLNVRLVKQFEKDMEVQREEFSERHQSWETKASSMETDIKEVTQEKEDLAQTLQSQATELKDIQAQLHQAEDESNLSWETKVQQLEEEMKEQKEKCSKDLSQKHQSWEATVHLMETRLKEAKEERDDLAQTRLSWETKEMKMEDEKTLLEDLCLHMKNKSRGFFAHRRATEERDVVLQKMLRKMQEKEMRKKAKGEKEEKEEAGRQ
SIO_010081: LOC117465537
subclass of: SO_0000673
so part of: LOC117465537
location: complement(join(202125..203078,203163..203786))
location: region:202125-203786:-1
so has part: feature:203163-203786:-1:exon
so has part: feature:202125-203078:-1:exon

XP_033964285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203163-203786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:202125-203078:-1:exon

LOC117465972
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(218288..222366)
location: region:218288-222366:-1
so has part: feature:218288-222366:-1:exon
subclass of: SO_0000011

117465972
type: Gene
SIO_000068: ncbigene

position:218288:-1
position: 218288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222366:-1
position: 222366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218288-222366:-1:exon

LOC117465972
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117465972
product: uncharacterized LOC117465972
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004554225.1
SIO_010081: LOC117465972
subclass of: SO_0000673
so part of: LOC117465972
location: complement(join(218288..219462,219660..219704,219902..219964,221730..221783,221951..221981,222169..222366))
location: region:218288-222366:-1
so has part: feature:222169-222366:-1:exon
so has part: feature:221951-221981:-1:exon
so has part: feature:221730-221783:-1:exon
so has part: feature:219902-219964:-1:exon
so has part: feature:219660-219704:-1:exon
so has part: feature:218288-219462:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:222169-222366:-1:exon

position:222169:-1
position: 222169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221951-221981:-1:exon

position:221951:-1
position: 221951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221981:-1
position: 221981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:221730-221783:-1:exon

position:221730:-1
position: 221730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221783:-1
position: 221783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:219902-219964:-1:exon

position:219902:-1
position: 219902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219964:-1
position: 219964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:219660-219704:-1:exon

position:219660:-1
position: 219660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219704:-1
position: 219704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:218288-219462:-1:exon

position:219462:-1
position: 219462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117466131
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466131
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(219533..219606)
location: region:219533-219606:-1
so has part: feature:219533-219606:-1:exon
subclass of: SO_0000578

117466131
type: Gene
SIO_000068: ncbigene

position:219533:-1
position: 219533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219606:-1
position: 219606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219533-219606:-1:exon

LOC117466131
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466131
product: small nucleolar RNA SNORD47
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00281
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554252.1
SIO_010081: LOC117466131
subclass of: SO_0000673
so part of: LOC117466131
location: complement(219533..219606)
location: region:219533-219606:-1
so has part: feature:219533-219606:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219533-219606:-1:exon

LOC117466121
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466121
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(221830..221914)
location: region:221830-221914:-1
so has part: feature:221830-221914:-1:exon
subclass of: SO_0000578

117466121
type: Gene
SIO_000068: ncbigene

position:221830:-1
position: 221830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221914:-1
position: 221914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221830-221914:-1:exon

LOC117466121
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466121
product: small nucleolar RNA snR60/Z15/Z230/Z193/J17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00309
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554242.1
SIO_010081: LOC117466121
subclass of: SO_0000673
so part of: LOC117466121
location: complement(221830..221914)
location: region:221830-221914:-1
so has part: feature:221830-221914:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:221830-221914:-1:exon

LOC117466142
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466142
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(222044..222128)
location: region:222044-222128:-1
so has part: feature:222044-222128:-1:exon
subclass of: SO_0000578

117466142
type: Gene
SIO_000068: ncbigene

position:222044:-1
position: 222044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222128:-1
position: 222128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222044-222128:-1:exon

LOC117466142
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466142
product: small nucleolar RNA snR60/Z15/Z230/Z193/J17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00309
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554263.1
SIO_010081: LOC117466142
subclass of: SO_0000673
so part of: LOC117466142
location: complement(222044..222128)
location: region:222044-222128:-1
so has part: feature:222044-222128:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:222044-222128:-1:exon

LOC117466137
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466137
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(222861..222927)
location: region:222861-222927:-1
so has part: feature:222861-222927:-1:exon
subclass of: SO_0000578

117466137
type: Gene
SIO_000068: ncbigene

position:222861:-1
position: 222861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222927:-1
position: 222927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222861-222927:-1:exon

LOC117466137
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466137
product: small nucleolar RNA SNORD75
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00612
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554258.1
SIO_010081: LOC117466137
subclass of: SO_0000673
so part of: LOC117466137
location: complement(222861..222927)
location: region:222861-222927:-1
so has part: feature:222861-222927:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:222861-222927:-1:exon

LOC117466138
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466138
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(223126..223193)
location: region:223126-223193:-1
so has part: feature:223126-223193:-1:exon
subclass of: SO_0000578

117466138
type: Gene
SIO_000068: ncbigene

position:223126:-1
position: 223126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223193:-1
position: 223193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223126-223193:-1:exon

LOC117466138
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466138
product: small nucleolar RNA SNORD75
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00612
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554259.1
SIO_010081: LOC117466138
subclass of: SO_0000673
so part of: LOC117466138
location: complement(223126..223193)
location: region:223126-223193:-1
so has part: feature:223126-223193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:223126-223193:-1:exon

LOC117466141
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466141
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(225961..226042)
location: region:225961-226042:-1
so has part: feature:225961-226042:-1:exon
subclass of: SO_0000578

117466141
type: Gene
SIO_000068: ncbigene

position:225961:-1
position: 225961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226042:-1
position: 226042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225961-226042:-1:exon

LOC117466141
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466141
product: small nucleolar RNA SNORD74
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00284
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554262.1
SIO_010081: LOC117466141
subclass of: SO_0000673
so part of: LOC117466141
location: complement(225961..226042)
location: region:225961-226042:-1
so has part: feature:225961-226042:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:225961-226042:-1:exon

LOC117466140
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466140
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(226650..226729)
location: region:226650-226729:-1
so has part: feature:226650-226729:-1:exon
subclass of: SO_0000578

117466140
type: Gene
SIO_000068: ncbigene

position:226650:-1
position: 226650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226729:-1
position: 226729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226650-226729:-1:exon

LOC117466140
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466140
product: small nucleolar RNA SNORD74
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00284
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554261.1
SIO_010081: LOC117466140
subclass of: SO_0000673
so part of: LOC117466140
location: complement(226650..226729)
location: region:226650-226729:-1
so has part: feature:226650-226729:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:226650-226729:-1:exon

LOC117466004
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 236528..433964
location: region:236528-433964:1
so has part: feature:236528-433964:1:exon
subclass of: SO_0000010

117466004
type: Gene
SIO_000068: ncbigene

position:236528:1
position: 236528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433964:1
position: 433964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236528-433964:1:exon

LOC117466004
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117466004
product: inactive pancreatic lipase-related protein 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034109134.1
SIO_010081: LOC117466004
subclass of: SO_0000673
so part of: LOC117466004
location: join(236528..236638,237193..237312,237909..238043,413277..413510,414225..414341,417232..417350,432120..432287,433875..433964)
location: region:236528-433964:1
so has part: feature:236528-236638:1:exon
so has part: feature:237193-237312:1:exon
so has part: feature:237909-238043:1:exon
so has part: feature:413277-413510:1:exon
so has part: feature:414225-414341:1:exon
so has part: feature:417232-417350:1:exon
so has part: feature:432120-432287:1:exon
so has part: feature:433875-433964:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:236528-236638:1:exon

position:236638:1
position: 236638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:237193-237312:1:exon

position:237193:1
position: 237193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237312:1
position: 237312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:237909-238043:1:exon

position:237909:1
position: 237909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238043:1
position: 238043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:413277-413510:1:exon

position:413277:1
position: 413277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413510:1
position: 413510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:414225-414341:1:exon

position:414225:1
position: 414225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414341:1
position: 414341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:417232-417350:1:exon

position:417232:1
position: 417232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417350:1
position: 417350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:432120-432287:1:exon

position:432120:1
position: 432120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432287:1
position: 432287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:433875-433964:1:exon

position:433875:1
position: 433875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117466004
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117466004
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: inactive pancreatic lipase-related protein 1-like
translation: MCVPHLCVSHCCVAHRQLAAVYKELTSGLRAFWSGLKEIKANESNQVLNYSGTRKTRFIIPGYLKEGDEDWPQEMCKAMLTWENVNCVAVEWKKGVRTQYVQAANNARVVSAQVASMITFLKSQYKQQADKFHIIGHSLGAHAAGAAGSRIPGLARITGTLDPVEPYFQDTDESVRLDTSDATFVDVIHTDGLPFNSKLGLGMSQSIGHIDFYPNGGELMPGCTANKGWIKDLDAIWQGTKRFDDCNHVRSYEYYIESMVKSQGFVAFPCSDKDSFDDRLVGVGRTYEVLLDAEVDVGVVEEVTFRWNNHIFNPMKPRYGVSKMELQRGKDNMIVSFCGTENVKENAVQRVLRCQA
SIO_010081: LOC117466004
subclass of: SO_0000673
so part of: LOC117466004
location: join(236528..236638,237193..237312,237909..238043,413277..413510,414225..414341,417232..417350,432120..432287,433875..433944)
location: region:236528-433944:1
so has part: feature:236528-236638:1:exon
so has part: feature:237193-237312:1:exon
so has part: feature:237909-238043:1:exon
so has part: feature:413277-413510:1:exon
so has part: feature:414225-414341:1:exon
so has part: feature:417232-417350:1:exon
so has part: feature:432120-432287:1:exon
so has part: feature:433875-433944:1:exon

XP_033965025.1
type: Protein
SIO_000068: ncbiprotein

position:433944:1
position: 433944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236528-236638:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237193-237312:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237909-238043:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413277-413510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:414225-414341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:417232-417350:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432120-432287:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:433875-433944:1:exon

LOC117465966
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(248670..297283)
location: region:248670-297283:-1
so has part: feature:248670-297283:-1:exon
subclass of: SO_0000010

117465966
type: Gene
SIO_000068: ncbigene

position:248670:-1
position: 248670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297283:-1
position: 297283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248670-297283:-1:exon

LOC117465966
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465966
product: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034109091.1
SIO_010081: LOC117465966
subclass of: SO_0000673
so part of: LOC117465966
location: complement(join(248670..250122,250623..250770,252522..252655,297179..297283))
location: region:248670-297283:-1
so has part: feature:297179-297283:-1:exon
so has part: feature:252522-252655:-1:exon
so has part: feature:250623-250770:-1:exon
so has part: feature:248670-250122:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:297179-297283:-1:exon

position:297179:-1
position: 297179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:252522-252655:-1:exon

position:252522:-1
position: 252522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252655:-1
position: 252655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:250623-250770:-1:exon

position:250623:-1
position: 250623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250770:-1
position: 250770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:248670-250122:-1:exon

position:250122:-1
position: 250122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117465966
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465966
product: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034109092.1
SIO_010081: LOC117465966
subclass of: SO_0000673
so part of: LOC117465966
location: complement(join(248670..250122,250623..250770,252522..252655,297161..297283))
location: region:248670-297283:-1
so has part: feature:297161-297283:-1:exon
so has part: feature:252522-252655:-1:exon
so has part: feature:250623-250770:-1:exon
so has part: feature:248670-250122:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:297161-297283:-1:exon

position:297161:-1
position: 297161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:252522-252655:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250623-250770:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:248670-250122:-1:exon

LOC117465966
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like
translation: MWKSVEKMRCFRKRSMFPFLGFLITFLLFFNLYMDDGYVLEAEKRQLGDTLMHPGNSERYVHTFRDLSNFSGTINVTYRYLAGIPLPRKKYLTIGLSSVKRKKGNYLLETIKSIFDQSSYEELKEIVVVVHLADFDLAWCENLVQEITRKFAHHIIAGRLLVIQAPEEYYPSLDGLKRNYNDPEDRVRFRSKQNVDYAFLLNFCTNLSHFYMMLEDDVRCSRNFLTGLKKVITSREGSYWVMLEFSKLGYIGKLYHSRDLPRLAHFLLMFYQEMPCDWLLIHFRGLLAQKDVIRFKPSLFQHMGYYSSYKGAENKLKDDDFEEDSIDIPDNPPASLYTNINVFENYDATKAYSTVDEYFWGKPPCTGDFFLIIFNKSTKISRIKIVTGTEDRQQDVLHHGALEVGQKSVDTKQGRQCTSYITLGEFKGGSIEVTNVDHKIGFDIECVRLVVTASQKEWLIIRTISLWTTQPVSQFIN
SIO_010081: LOC117465966
subclass of: SO_0000673
so part of: LOC117465966
location: complement(join(248957..250122,250623..250770,252522..252641))
location: region:248957-252641:-1
so has part: feature:252522-252641:-1:exon
so has part: feature:250623-250770:-1:exon
so has part: feature:248957-250122:-1:exon

XP_033964982.1
type: Protein
SIO_000068: ncbiprotein

position:248957:-1
position: 248957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252641:-1
position: 252641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252522-252641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:250623-250770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248957-250122:-1:exon

LOC117465966
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like
translation: MWKSVEKMRCFRKRSMFPFLGFLITFLLFFNLYMDDGYVLEAEKRQLGDTLMHPGNSERYVHTFRDLSNFSGTINVTYRYLAGIPLPRKKYLTIGLSSVKRKKGNYLLETIKSIFDQSSYEELKEIVVVVHLADFDLAWCENLVQEITRKFAHHIIAGRLLVIQAPEEYYPSLDGLKRNYNDPEDRVRFRSKQNVDYAFLLNFCTNLSHFYMMLEDDVRCSRNFLTGLKKVITSREGSYWVMLEFSKLGYIGKLYHSRDLPRLAHFLLMFYQEMPCDWLLIHFRGLLAQKDVIRFKPSLFQHMGYYSSYKGAENKLKDDDFEEDSIDIPDNPPASLYTNINVFENYDATKAYSTVDEYFWGKPPCTGDFFLIIFNKSTKISRIKIVTGTEDRQQDVLHHGALEVGQKSVDTKQGRQCTSYITLGEFKGGSIEVTNVDHKIGFDIECVRLVVTASQKEWLIIRTISLWTTQPVSQFIN
SIO_010081: LOC117465966
subclass of: SO_0000673
so part of: LOC117465966
location: complement(join(248957..250122,250623..250770,252522..252641))
location: region:248957-252641:-1
so has part: feature:252522-252641:-1:exon
so has part: feature:250623-250770:-1:exon
so has part: feature:248957-250122:-1:exon

XP_033964983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252522-252641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:250623-250770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248957-250122:-1:exon

LOC117465965
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 321434..343516
location: region:321434-343516:1
so has part: feature:321434-343516:1:exon
subclass of: SO_0000010

117465965
type: Gene
SIO_000068: ncbigene

position:321434:1
position: 321434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343516:1
position: 343516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321434-343516:1:exon

LOC117465965
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465965
product: AMP deaminase 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_034109090.1
SIO_010081: LOC117465965
subclass of: SO_0000673
so part of: LOC117465965
location: join(321434..321693,325397..325460,329606..329828,329950..330109,334132..334297,336735..336954,337149..337278,337456..337650,338013..338144,339413..339576,339711..339837,339988..340151,340415..340535,341611..341784,342043..342153,342631..343516)
location: region:321434-343516:1
so has part: feature:321434-321693:1:exon
so has part: feature:325397-325460:1:exon
so has part: feature:329606-329828:1:exon
so has part: feature:329950-330109:1:exon
so has part: feature:334132-334297:1:exon
so has part: feature:336735-336954:1:exon
so has part: feature:337149-337278:1:exon
so has part: feature:337456-337650:1:exon
so has part: feature:338013-338144:1:exon
so has part: feature:339413-339576:1:exon
so has part: feature:339711-339837:1:exon
so has part: feature:339988-340151:1:exon
so has part: feature:340415-340535:1:exon
so has part: feature:341611-341784:1:exon
so has part: feature:342043-342153:1:exon
so has part: feature:342631-343516:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:321434-321693:1:exon

position:321693:1
position: 321693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:325397-325460:1:exon

position:325397:1
position: 325397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325460:1
position: 325460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:329606-329828:1:exon

position:329606:1
position: 329606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329828:1
position: 329828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:329950-330109:1:exon

position:329950:1
position: 329950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330109:1
position: 330109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:334132-334297:1:exon

position:334132:1
position: 334132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334297:1
position: 334297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:336735-336954:1:exon

position:336735:1
position: 336735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336954:1
position: 336954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:337149-337278:1:exon

position:337149:1
position: 337149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337278:1
position: 337278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:337456-337650:1:exon

position:337456:1
position: 337456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337650:1
position: 337650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:338013-338144:1:exon

position:338013:1
position: 338013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338144:1
position: 338144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:339413-339576:1:exon

position:339413:1
position: 339413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339576:1
position: 339576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:339711-339837:1:exon

position:339711:1
position: 339711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339837:1
position: 339837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:339988-340151:1:exon

position:339988:1
position: 339988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340151:1
position: 340151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:340415-340535:1:exon

position:340415:1
position: 340415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340535:1
position: 340535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:341611-341784:1:exon

position:341611:1
position: 341611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341784:1
position: 341784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:342043-342153:1:exon

position:342043:1
position: 342043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342153:1
position: 342153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:342631-343516:1:exon

position:342631:1
position: 342631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117465965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMP deaminase 3-like
translation: MSRRDTPLLKQHSTPCFGKDMPRLFQKMSMSKVDEKVRLRAEQVYASALKEEDNKEALSLFNVQEDCPIGLHEDRQRTLERELAAQSSEECAKKMKSFMLKRSQSTVGGVQAFPRSPLVLPTIPEPFPPENFPDFQRVTISGDYCAGITVEDYEQAAKSILGALFIREKYCRLAYHHFPRTAAQFLRNADNEEWREEDEVMPEIWPFPHEGEDPYSMEGIPENLNYELQMKDGIVHVYDNAEALKQQQPHSLPYPDLETFAIDLSHVLAMIADGPTKTYCHRRLNFLESKFYLHEMMNEMAELKELKCVPHRDFYNVRKVDTHIHAAACMNQKHLLKFIKTTYKEETDRVVLEKDGQEVTHKEVFNKLNMDPYDLTVDSLDVHAGRQTFHRFDKFNSKYNPVGASELREIYLKSDNHIKGEYFARIIKEVSKELEESKYQHAEPRLSIYGRSASEWEGLATWFIQHKLHSPNMRWMIQVPRIYDIFKSKKILPNFAKMLENVFLPLFEATVNPQKHKEIHVFLKYVTGFDSVDDESKHSDHMFSYKSPKPEAWTTDDNPPYTYYLFYMYANIMVLNNLRKERGLNTFQFRPHCGEAGSITHLVSAFLTADNISHGLNLKKSPVLQYLYYLAQVPIAMSPLSNNSLFLEYSKNPLREFLQKGLRVSLSTDDPMQFHYTKEALMEEYAIAAQLWKLSTCDLCEIARNSVLQSGLSHQEKKHFIGSSYLEDGPAGNDIRRTNVAQIRMAYRYETLCNELSFLVDAVKTEVGNTIPE
SIO_010081: LOC117465965
subclass of: SO_0000673
so part of: LOC117465965
location: join(325403..325460,329606..329828,329950..330109,334132..334297,336735..336954,337149..337278,337456..337650,338013..338144,339413..339576,339711..339837,339988..340151,340415..340535,341611..341784,342043..342153,342631..342807)
location: region:325403-342807:1
so has part: feature:325403-325460:1:exon
so has part: feature:329606-329828:1:exon
so has part: feature:329950-330109:1:exon
so has part: feature:334132-334297:1:exon
so has part: feature:336735-336954:1:exon
so has part: feature:337149-337278:1:exon
so has part: feature:337456-337650:1:exon
so has part: feature:338013-338144:1:exon
so has part: feature:339413-339576:1:exon
so has part: feature:339711-339837:1:exon
so has part: feature:339988-340151:1:exon
so has part: feature:340415-340535:1:exon
so has part: feature:341611-341784:1:exon
so has part: feature:342043-342153:1:exon
so has part: feature:342631-342807:1:exon

XP_033964981.1
type: Protein
SIO_000068: ncbiprotein

position:325403:1
position: 325403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342807:1
position: 342807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325403-325460:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329606-329828:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329950-330109:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:334132-334297:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336735-336954:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:337149-337278:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:337456-337650:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:338013-338144:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:339413-339576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:339711-339837:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:339988-340151:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:340415-340535:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:341611-341784:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:342043-342153:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:342631-342807:1:exon

rnf141
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: rnf141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(348567..355837)
location: region:348567-355837:-1
so has part: feature:348567-355837:-1:exon
subclass of: SO_0000010

117465971
type: Gene
SIO_000068: ncbigene

position:348567:-1
position: 348567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355837:-1
position: 355837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348567-355837:-1:exon

rnf141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: rnf141
product: ring finger protein 141
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_034109099.1
SIO_010081: rnf141
subclass of: SO_0000673
so part of: rnf141
location: complement(join(348567..349689,350607..350714,352526..352698,353080..353188,353967..354162,355750..355837))
location: region:348567-355837:-1
so has part: feature:355750-355837:-1:exon
so has part: feature:353967-354162:-1:exon
so has part: feature:353080-353188:-1:exon
so has part: feature:352526-352698:-1:exon
so has part: feature:350607-350714:-1:exon
so has part: feature:348567-349689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355750-355837:-1:exon

position:355750:-1
position: 355750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:353967-354162:-1:exon

position:353967:-1
position: 353967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354162:-1
position: 354162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:353080-353188:-1:exon

position:353080:-1
position: 353080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353188:-1
position: 353188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:352526-352698:-1:exon

position:352526:-1
position: 352526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352698:-1
position: 352698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:350607-350714:-1:exon

position:350607:-1
position: 350607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350714:-1
position: 350714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:348567-349689:-1:exon

position:349689:-1
position: 349689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rnf141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: rnf141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 141
translation: MGQQLSGQALNRLPEKLVKHAGLVRDSGYLTYEEFLGRVSELNDVTAKLASGQQKHLLFEVQPGSDATALWKVAVRVLCTKINKETGMVEASRIMNLYQFIQLYRDVTSQAAEVLCAEGASSAQLPSADSCQASMWMGRVKQLTDEEECCICMDGKSDLILPCAHSFCQKCIDKWSGQSRNCPICRLQVTAANDSWIMSDIPTEEDIAGYILNLADEAGHPHQP
SIO_010081: rnf141
subclass of: SO_0000673
so part of: rnf141
location: complement(join(349539..349689,350607..350714,352526..352698,353080..353188,353967..354100))
location: region:349539-354100:-1
so has part: feature:353967-354100:-1:exon
so has part: feature:353080-353188:-1:exon
so has part: feature:352526-352698:-1:exon
so has part: feature:350607-350714:-1:exon
so has part: feature:349539-349689:-1:exon

XP_033964990.1
type: Protein
SIO_000068: ncbiprotein

position:349539:-1
position: 349539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354100:-1
position: 354100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353967-354100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353080-353188:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:352526-352698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350607-350714:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:349539-349689:-1:exon

LOC117465968
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(366974..370545)
location: region:366974-370545:-1
so has part: feature:366974-370545:-1:exon
subclass of: SO_0000010

117465968
type: Gene
SIO_000068: ncbigene

position:366974:-1
position: 366974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370545:-1
position: 370545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366974-370545:-1:exon

LOC117465968
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465968
product: tubulin beta-4B chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_034109094.1
SIO_010081: LOC117465968
subclass of: SO_0000673
so part of: LOC117465968
location: complement(join(366974..368179,368270..368380,368491..368599,370428..370545))
location: region:366974-370545:-1
so has part: feature:370428-370545:-1:exon
so has part: feature:368491-368599:-1:exon
so has part: feature:368270-368380:-1:exon
so has part: feature:366974-368179:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:370428-370545:-1:exon

position:370428:-1
position: 370428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:368491-368599:-1:exon

position:368491:-1
position: 368491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368599:-1
position: 368599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:368270-368380:-1:exon

position:368270:-1
position: 368270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368380:-1
position: 368380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:366974-368179:-1:exon

position:368179:-1
position: 368179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117465968
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-4B chain
translation: MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGDFEEEGEEEDLA
SIO_010081: LOC117465968
subclass of: SO_0000673
so part of: LOC117465968
location: complement(join(367116..368179,368270..368380,368491..368599,370428..370484))
location: region:367116-370484:-1
so has part: feature:370428-370484:-1:exon
so has part: feature:368491-368599:-1:exon
so has part: feature:368270-368380:-1:exon
so has part: feature:367116-368179:-1:exon

XP_033964985.1
type: Protein
SIO_000068: ncbiprotein

position:367116:-1
position: 367116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370484:-1
position: 370484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370428-370484:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:368491-368599:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:368270-368380:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:367116-368179:-1:exon

LOC117465977
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(379105..379833)
location: region:379105-379833:-1
so has part: feature:379105-379833:-1:exon
subclass of: SO_0000011

117465977
type: Gene
SIO_000068: ncbigene

position:379105:-1
position: 379105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379833:-1
position: 379833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379105-379833:-1:exon

LOC117465977
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117465977
product: uncharacterized LOC117465977
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004554229.1
SIO_010081: LOC117465977
subclass of: SO_0000673
so part of: LOC117465977
location: complement(join(379105..379193,379289..379423,379706..379833))
location: region:379105-379833:-1
so has part: feature:379706-379833:-1:exon
so has part: feature:379289-379423:-1:exon
so has part: feature:379105-379193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:379706-379833:-1:exon

position:379706:-1
position: 379706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:379289-379423:-1:exon

position:379289:-1
position: 379289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379423:-1
position: 379423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:379105-379193:-1:exon

position:379193:-1
position: 379193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117465974
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(380429..383327)
location: region:380429-383327:-1
so has part: feature:380429-383327:-1:exon
subclass of: SO_0000011

117465974
type: Gene
SIO_000068: ncbigene

position:380429:-1
position: 380429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383327:-1
position: 383327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380429-383327:-1:exon

LOC117465974
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117465974
product: uncharacterized LOC117465974
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004554227.1
SIO_010081: LOC117465974
subclass of: SO_0000673
so part of: LOC117465974
location: complement(join(380429..380524,382897..382946,383132..383327))
location: region:380429-383327:-1
so has part: feature:383132-383327:-1:exon
so has part: feature:382897-382946:-1:exon
so has part: feature:380429-380524:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:383132-383327:-1:exon

position:383132:-1
position: 383132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:382897-382946:-1:exon

position:382897:-1
position: 382897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382946:-1
position: 382946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:380429-380524:-1:exon

position:380524:-1
position: 380524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117465975
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 390884..394031
location: region:390884-394031:1
so has part: feature:390884-394031:1:exon
subclass of: SO_0000011

117465975
type: Gene
SIO_000068: ncbigene

position:390884:1
position: 390884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394031:1
position: 394031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390884-394031:1:exon

LOC117465975
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117465975
product: uncharacterized LOC117465975
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004554228.1
SIO_010081: LOC117465975
subclass of: SO_0000673
so part of: LOC117465975
location: join(390884..390976,391162..391211,393936..394031)
location: region:390884-394031:1
so has part: feature:390884-390976:1:exon
so has part: feature:391162-391211:1:exon
so has part: feature:393936-394031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:390884-390976:1:exon

position:390976:1
position: 390976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:391162-391211:1:exon

position:391162:1
position: 391162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391211:1
position: 391211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:393936-394031:1:exon

position:393936:1
position: 393936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117465973
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 394570..395287
location: region:394570-395287:1
so has part: feature:394570-395287:1:exon
subclass of: SO_0000011

117465973
type: Gene
SIO_000068: ncbigene

position:394570:1
position: 394570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395287:1
position: 395287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394570-395287:1:exon

LOC117465973
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117465973
product: uncharacterized LOC117465973
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004554226.1
SIO_010081: LOC117465973
subclass of: SO_0000673
so part of: LOC117465973
location: join(394570..394697,394969..395103,395199..395287)
location: region:394570-395287:1
so has part: feature:394570-394697:1:exon
so has part: feature:394969-395103:1:exon
so has part: feature:395199-395287:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:394570-394697:1:exon

position:394697:1
position: 394697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:394969-395103:1:exon

position:394969:1
position: 394969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395103:1
position: 395103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:395199-395287:1:exon

position:395199:1
position: 395199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117465969
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 396670..398209
location: region:396670-398209:1
so has part: feature:396670-398209:1:exon
subclass of: SO_0000010

117465969
type: Gene
SIO_000068: ncbigene

position:396670:1
position: 396670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398209:1
position: 398209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396670-398209:1:exon

LOC117465969
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465969
product: uncharacterized LOC117465969
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034109096.1
SIO_010081: LOC117465969
subclass of: SO_0000673
so part of: LOC117465969
location: join(396670..396865,396947..397115,397434..397561,397857..398209)
location: region:396670-398209:1
so has part: feature:396670-396865:1:exon
so has part: feature:396947-397115:1:exon
so has part: feature:397434-397561:1:exon
so has part: feature:397857-398209:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:396670-396865:1:exon

position:396865:1
position: 396865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:396947-397115:1:exon

position:396947:1
position: 396947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397115:1
position: 397115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:397434-397561:1:exon

position:397434:1
position: 397434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397561:1
position: 397561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:397857-398209:1:exon

position:397857:1
position: 397857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117465969
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117465969
translation: MNAMSVTRHSSDITLVQDKMKATFQQRQKVVQDRATASTVLDLFPRFLDTSGLIEQDFTMLFGKEVSGKCLAKWPTFFKPRISADCKNLPGSLHVDELLLSAQQESDDGVWDCEVAAILLLLHLLPPTSKGKKSPVKISAKDAAGRLVKFLRVGKSIETFLKDTGPAQPFLLCVGERNDSIQHFYIVMDQKAVPCKTQTGVAAFDELFKAHLAFAVSYDEALCNFYTFIQTTVYGIDVGSVKESPRVKEIRARLLHSSV
SIO_010081: LOC117465969
subclass of: SO_0000673
so part of: LOC117465969
location: join(396707..396865,396947..397115,397434..397561,397857..398180)
location: region:396707-398180:1
so has part: feature:396707-396865:1:exon
so has part: feature:396947-397115:1:exon
so has part: feature:397434-397561:1:exon
so has part: feature:397857-398180:1:exon

XP_033964987.1
type: Protein
SIO_000068: ncbiprotein

position:396707:1
position: 396707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398180:1
position: 398180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396707-396865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:396947-397115:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:397434-397561:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:397857-398180:1:exon

LOC117465967
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 401182..404631
location: region:401182-404631:1
so has part: feature:401182-404631:1:exon
subclass of: SO_0000010

117465967
type: Gene
SIO_000068: ncbigene

position:401182:1
position: 401182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404631:1
position: 404631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401182-404631:1:exon

LOC117465967
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465967
product: tubulin beta-1 chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 544 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_034109093.1
SIO_010081: LOC117465967
subclass of: SO_0000673
so part of: LOC117465967
location: join(401182..401297,403008..403116,403225..403335,403426..404631)
location: region:401182-404631:1
so has part: feature:401182-401297:1:exon
so has part: feature:403008-403116:1:exon
so has part: feature:403225-403335:1:exon
so has part: feature:403426-404631:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:401182-401297:1:exon

position:401297:1
position: 401297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:403008-403116:1:exon

position:403008:1
position: 403008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403116:1
position: 403116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:403225-403335:1:exon

position:403225:1
position: 403225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403335:1
position: 403335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:403426-404631:1:exon

position:403426:1
position: 403426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117465967
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-1 chain-like
translation: MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPSYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGDFEEEGEEEDLA
SIO_010081: LOC117465967
subclass of: SO_0000673
so part of: LOC117465967
location: join(401241..401297,403008..403116,403225..403335,403426..404489)
location: region:401241-404489:1
so has part: feature:401241-401297:1:exon
so has part: feature:403008-403116:1:exon
so has part: feature:403225-403335:1:exon
so has part: feature:403426-404489:1:exon

XP_033964984.1
type: Protein
SIO_000068: ncbiprotein

position:401241:1
position: 401241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404489:1
position: 404489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401241-401297:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403008-403116:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:403225-403335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:403426-404489:1:exon

LOC117465970
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465970
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(423500..431292)
location: region:423500-431292:-1
so has part: feature:423500-431292:-1:exon
subclass of: SO_0000010

117465970
type: Gene
SIO_000068: ncbigene

position:423500:-1
position: 423500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431292:-1
position: 431292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423500-431292:-1:exon

LOC117465970
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465970
product: complement C1q-like protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_034109098.1
SIO_010081: LOC117465970
subclass of: SO_0000673
so part of: LOC117465970
location: complement(join(423500..423965,424041..424163,424296..424406,424779..425003,431215..431292))
location: region:423500-431292:-1
so has part: feature:431215-431292:-1:exon
so has part: feature:424779-425003:-1:exon
so has part: feature:424296-424406:-1:exon
so has part: feature:424041-424163:-1:exon
so has part: feature:423500-423965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:431215-431292:-1:exon

position:431215:-1
position: 431215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:424779-425003:-1:exon

position:424779:-1
position: 424779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425003:-1
position: 425003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:424296-424406:-1:exon

position:424296:-1
position: 424296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424406:-1
position: 424406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:424041-424163:-1:exon

position:424041:-1
position: 424041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424163:-1
position: 424163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:423500-423965:-1:exon

position:423965:-1
position: 423965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117465970
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465970
product: complement C1q-like protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_034109097.1
SIO_010081: LOC117465970
subclass of: SO_0000673
so part of: LOC117465970
location: complement(join(423500..423965,424041..424163,424296..424406,424779..425003,425132..425191))
location: region:423500-425191:-1
so has part: feature:425132-425191:-1:exon
so has part: feature:424779-425003:-1:exon
so has part: feature:424296-424406:-1:exon
so has part: feature:424041-424163:-1:exon
so has part: feature:423500-423965:-1:exon

position:425191:-1
position: 425191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425132-425191:-1:exon

position:425132:-1
position: 425132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:424779-425003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424296-424406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424041-424163:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423500-423965:-1:exon

LOC117465970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465970
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q-like protein 2
translation: MRGAVLLLLFCVSAEGGGVDRGSQSSVLAEREIWTELRAIKNKVGEQEVELQTHRDNVSSLEKENRALVSRVSASEEQLAALRAELEVSKNELQLDETGRRSSGTKVAFSAALSPGKFGPYNTETPLVYRRSIANLGGAYSSNTGVFTAPVRGAYYFRFTAMNNKHGENMAVNLYRNSQRIIHNSKQNDGNTFLSNAAVLRLNQGDEVYMRLHEDCGLFENDDTYNTFSGFLLFSI
SIO_010081: LOC117465970
subclass of: SO_0000673
so part of: LOC117465970
location: complement(join(423688..423965,424041..424163,424296..424406,424779..424977))
location: region:423688-424977:-1
so has part: feature:424779-424977:-1:exon
so has part: feature:424296-424406:-1:exon
so has part: feature:424041-424163:-1:exon
so has part: feature:423688-423965:-1:exon

XP_033964988.1
type: Protein
SIO_000068: ncbiprotein

position:423688:-1
position: 423688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424977:-1
position: 424977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424779-424977:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424296-424406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424041-424163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:423688-423965:-1:exon

LOC117465970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465970
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q-like protein 2
translation: MRGAVLLLLFCVSAEGGGVDRGSQSSVLAEREIWTELRAIKNKVGEQEVELQTHRDNVSSLEKENRALVSRVSASEEQLAALRAELEVSKNELQLDETGRRSSGTKVAFSAALSPGKFGPYNTETPLVYRRSIANLGGAYSSNTGVFTAPVRGAYYFRFTAMNNKHGENMAVNLYRNSQRIIHNSKQNDGNTFLSNAAVLRLNQGDEVYMRLHEDCGLFENDDTYNTFSGFLLFSI
SIO_010081: LOC117465970
subclass of: SO_0000673
so part of: LOC117465970
location: complement(join(423688..423965,424041..424163,424296..424406,424779..424977))
location: region:423688-424977:-1
so has part: feature:424779-424977:-1:exon
so has part: feature:424296-424406:-1:exon
so has part: feature:424041-424163:-1:exon
so has part: feature:423688-423965:-1:exon

XP_033964989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424779-424977:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424296-424406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424041-424163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:423688-423965:-1:exon

LOC117466005
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(447506..464272)
location: region:447506-464272:-1
so has part: feature:447506-464272:-1:exon
subclass of: SO_0000010

117466005
type: Gene
SIO_000068: ncbigene

position:447506:-1
position: 447506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464272:-1
position: 464272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447506-464272:-1:exon

LOC117466005
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117466005
product: inactive pancreatic lipase-related protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034109135.1
SIO_010081: LOC117466005
subclass of: SO_0000673
so part of: LOC117466005
location: complement(join(447506..447592,448994..449161,451395..451509,452322..452451,454214..454332,455734..455850,459157..459276,459707..459815,460777..460911,461508..461627,462490..462641,464041..464089,464162..464272))
location: region:447506-464272:-1
so has part: feature:464162-464272:-1:exon
so has part: feature:464041-464089:-1:exon
so has part: feature:462490-462641:-1:exon
so has part: feature:461508-461627:-1:exon
so has part: feature:460777-460911:-1:exon
so has part: feature:459707-459815:-1:exon
so has part: feature:459157-459276:-1:exon
so has part: feature:455734-455850:-1:exon
so has part: feature:454214-454332:-1:exon
so has part: feature:452322-452451:-1:exon
so has part: feature:451395-451509:-1:exon
so has part: feature:448994-449161:-1:exon
so has part: feature:447506-447592:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464162-464272:-1:exon

position:464162:-1
position: 464162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:464041-464089:-1:exon

position:464041:-1
position: 464041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464089:-1
position: 464089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:462490-462641:-1:exon

position:462490:-1
position: 462490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462641:-1
position: 462641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:461508-461627:-1:exon

position:461508:-1
position: 461508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461627:-1
position: 461627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:460777-460911:-1:exon

position:460777:-1
position: 460777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460911:-1
position: 460911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:459707-459815:-1:exon

position:459707:-1
position: 459707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459815:-1
position: 459815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:459157-459276:-1:exon

position:459157:-1
position: 459157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459276:-1
position: 459276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:455734-455850:-1:exon

position:455734:-1
position: 455734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455850:-1
position: 455850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:454214-454332:-1:exon

position:454214:-1
position: 454214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454332:-1
position: 454332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:452322-452451:-1:exon

position:452322:-1
position: 452322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452451:-1
position: 452451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:451395-451509:-1:exon

position:451395:-1
position: 451395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451509:-1
position: 451509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:448994-449161:-1:exon

position:448994:-1
position: 448994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449161:-1
position: 449161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:447506-447592:-1:exon

position:447592:-1
position: 447592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117466005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117466005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive pancreatic lipase-related protein 1-like
translation: MCVPHLCVSHCCVAHRQLAAVFKELTSGLTAFWSGLKVAHMWSLLFFLIGTAYAAEDCFDGLGCFDDLPPWGGTPQRPSSALPWHPEEIGTRFLLFTQMDRYYQEIKANESNQVLNYSGTRKTRFIIPGYLKEGDEDWPQEMCKAMLTWENVNCVAVEWKKGVRTQYVQAANNARVVSAQVASMITFLKSQYKQQADKFHIIGHSLGAHAAGAAGSRIPGLARITGLDPVEPYFQDTDESVRLDTSDATFVDVIHTDGLPFNSKLGLGMSQSIGHIDFYPNGGELMPGCTANKGWIKDLDAIWQGTKRFDDCNHVRSYEYYIESMVKSQGFVAFPCSDKDSFDDGKCFPCAENKCPLMGSHADRFTLTDGVLKSKYFLKTGSSKPFGRYSYRVEMTLDGPIWPNPGFMFMALSGDNDSTKEHQIFVGSLVSGRTYEVLLDAEVDVGVVEEVTFRWNNHIFNPMKPRYGVSKMELQRGKDNMIVSFCGTENVKENAVQHVLPCQA
SIO_010081: LOC117466005
subclass of: SO_0000673
so part of: LOC117466005
location: complement(join(447523..447592,448994..449161,451395..451509,452322..452451,454214..454332,455734..455850,459157..459276,459707..459815,460777..460911,461508..461627,462490..462641,464041..464089,464162..464272))
location: region:447523-464272:-1
so has part: feature:464162-464272:-1:exon
so has part: feature:464041-464089:-1:exon
so has part: feature:462490-462641:-1:exon
so has part: feature:461508-461627:-1:exon
so has part: feature:460777-460911:-1:exon
so has part: feature:459707-459815:-1:exon
so has part: feature:459157-459276:-1:exon
so has part: feature:455734-455850:-1:exon
so has part: feature:454214-454332:-1:exon
so has part: feature:452322-452451:-1:exon
so has part: feature:451395-451509:-1:exon
so has part: feature:448994-449161:-1:exon
so has part: feature:447523-447592:-1:exon

XP_033965026.1
type: Protein
SIO_000068: ncbiprotein

position:447523:-1
position: 447523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464162-464272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464041-464089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:462490-462641:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:461508-461627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:460777-460911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459707-459815:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:459157-459276:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455734-455850:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:454214-454332:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452322-452451:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:451395-451509:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:448994-449161:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:447523-447592:-1:exon

LOC117465528
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 486401..487454
location: region:486401-487454:1
so has part: feature:486401-487454:1:exon
subclass of: SO_0000011

117465528
type: Gene
SIO_000068: ncbigene

position:486401:1
position: 486401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487454:1
position: 487454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486401-487454:1:exon

LOC117465528
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117465528
product: uncharacterized LOC117465528
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004554193.1
SIO_010081: LOC117465528
subclass of: SO_0000673
so part of: LOC117465528
location: join(486401..486584,487420..487454)
location: region:486401-487454:1
so has part: feature:486401-486584:1:exon
so has part: feature:487420-487454:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:486401-486584:1:exon

position:486584:1
position: 486584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:487420-487454:1:exon

position:487420:1
position: 487420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117466006
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466006
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(493676..495156)
location: region:493676-495156:-1
so has part: feature:493676-495156:-1:exon
subclass of: SO_0000010

117466006
type: Gene
SIO_000068: ncbigene

position:493676:-1
position: 493676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495156:-1
position: 495156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493676-495156:-1:exon

LOC117466006
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117466006
product: complement C1q-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034109136.1
SIO_010081: LOC117466006
subclass of: SO_0000673
so part of: LOC117466006
location: complement(join(493676..493959,494654..494782,494884..494946,495079..495156))
location: region:493676-495156:-1
so has part: feature:495079-495156:-1:exon
so has part: feature:494884-494946:-1:exon
so has part: feature:494654-494782:-1:exon
so has part: feature:493676-493959:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:495079-495156:-1:exon

position:495079:-1
position: 495079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:494884-494946:-1:exon

position:494884:-1
position: 494884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494946:-1
position: 494946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:494654-494782:-1:exon

position:494654:-1
position: 494654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494782:-1
position: 494782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:493676-493959:-1:exon

position:493959:-1
position: 493959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117466006
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117466006
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q-like protein 2
translation: MRKAAVLLLCLLWTGAQGEDGAQENRMSSSEKQVVEFQTQNSAGPQVAFSAGLSDAGVVGPFGTNSILKYSKVFTNIGLAYSPTTGIFTAPIKGVYYFSFNMWGSRFVSDTALEFALNNVIKMRLQDYNDAYGFVSASNSMVLQMEKGDVANIVLPSSYSVYDELFNRMVFSGFLLFPL
SIO_010081: LOC117466006
subclass of: SO_0000673
so part of: LOC117466006
location: complement(join(493676..493959,494654..494782,494884..494946,495079..495142))
location: region:493676-495142:-1
so has part: feature:495079-495142:-1:exon
so has part: feature:494884-494946:-1:exon
so has part: feature:494654-494782:-1:exon
so has part: feature:493676-493959:-1:exon

XP_033965027.1
type: Protein
SIO_000068: ncbiprotein

position:495142:-1
position: 495142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495079-495142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494884-494946:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:494654-494782:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:493676-493959:-1:exon

si:dkey-118j18.2
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: si:dkey-118j18.2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 527828..538837
location: region:527828-538837:1
so has part: feature:527828-538837:1:exon
subclass of: SO_0000010

117465840
type: Gene
SIO_000068: ncbigene

position:527828:1
position: 527828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538837:1
position: 538837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527828-538837:1:exon

si:dkey-118j18.2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: si:dkey-118j18.2
product: uncharacterized si:dkey-118j18.2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_034108887.1
SIO_010081: si:dkey-118j18.2
subclass of: SO_0000673
so part of: si:dkey-118j18.2
location: join(527828..527837,530931..530936,531836..531842,533200..533335,538473..538837)
location: region:527828-538837:1
so has part: feature:527828-527837:1:exon
so has part: feature:530931-530936:1:exon
so has part: feature:531836-531842:1:exon
so has part: feature:533200-533335:1:exon
so has part: feature:538473-538837:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527828-527837:1:exon

position:527837:1
position: 527837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:530931-530936:1:exon

position:530931:1
position: 530931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530936:1
position: 530936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:531836-531842:1:exon

position:531836:1
position: 531836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531842:1
position: 531842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:533200-533335:1:exon

position:533200:1
position: 533200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533335:1
position: 533335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:538473-538837:1:exon

position:538473:1
position: 538473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:dkey-118j18.2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: si:dkey-118j18.2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein si:dkey-118j18.2 isoform X1
translation: MYERQSQTSVWPSWYGAQDDLSTEEPSAAALPPDASFSQLDMPPPYEAVSGEDDLKPPPYSECAHHDEADAPPHHTVVISEGDTISINEAPPPYTLCPPAVSQPDVPVHNESERRPN
SIO_010081: si:dkey-118j18.2
subclass of: SO_0000673
so part of: si:dkey-118j18.2
location: join(527833..527837,530931..530936,531836..531842,533200..533335,538473..538672)
location: region:527833-538672:1
so has part: feature:527833-527837:1:exon
so has part: feature:530931-530936:1:exon
so has part: feature:531836-531842:1:exon
so has part: feature:533200-533335:1:exon
so has part: feature:538473-538672:1:exon

XP_033964778.1
type: Protein
SIO_000068: ncbiprotein

position:527833:1
position: 527833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538672:1
position: 538672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527833-527837:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:530931-530936:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:531836-531842:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533200-533335:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:538473-538672:1:exon

si:dkey-118j18.2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: si:dkey-118j18.2
product: uncharacterized si:dkey-118j18.2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_034108888.1
SIO_010081: si:dkey-118j18.2
subclass of: SO_0000673
so part of: si:dkey-118j18.2
location: join(530931..530936,531836..531842,533203..533335,538473..538837)
location: region:530931-538837:1
so has part: feature:530931-530936:1:exon
so has part: feature:531836-531842:1:exon
so has part: feature:533203-533335:1:exon
so has part: feature:538473-538837:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:530931-530936:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531836-531842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:533203-533335:1:exon

position:533203:1
position: 533203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:538473-538837:1:exon

si:dkey-118j18.2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: si:dkey-118j18.2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein si:dkey-118j18.2 isoform X2
translation: MPPPYEAVSGEDDLKPPPYSECAHHDEADAPPHHTVVISEGDTISINEAPPPYTLCPPAVSQPDVPVHNESERRPN
SIO_010081: si:dkey-118j18.2
subclass of: SO_0000673
so part of: si:dkey-118j18.2
location: join(533305..533335,538473..538672)
location: region:533305-538672:1
so has part: feature:533305-533335:1:exon
so has part: feature:538473-538672:1:exon

XP_033964779.1
type: Protein
SIO_000068: ncbiprotein

position:533305:1
position: 533305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533305-533335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:538473-538672:1:exon

LOC117465913
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 548614..553899
location: region:548614-553899:1
so has part: feature:548614-553899:1:exon
subclass of: SO_0000010

117465913
type: Gene
SIO_000068: ncbigene

position:548614:1
position: 548614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553899:1
position: 553899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548614-553899:1:exon

LOC117465913
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465913
product: uncharacterized LOC117465913, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034109007.1
SIO_010081: LOC117465913
subclass of: SO_0000673
so part of: LOC117465913
location: join(548614..548755,550379..550621,551262..551452,551588..551743,551987..552079,553379..553899)
location: region:548614-553899:1
so has part: feature:548614-548755:1:exon
so has part: feature:550379-550621:1:exon
so has part: feature:551262-551452:1:exon
so has part: feature:551588-551743:1:exon
so has part: feature:551987-552079:1:exon
so has part: feature:553379-553899:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:548614-548755:1:exon

position:548755:1
position: 548755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550379-550621:1:exon

position:550379:1
position: 550379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550621:1
position: 550621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:551262-551452:1:exon

position:551262:1
position: 551262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551452:1
position: 551452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:551588-551743:1:exon

position:551588:1
position: 551588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551743:1
position: 551743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:551987-552079:1:exon

position:551987:1
position: 551987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552079:1
position: 552079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:553379-553899:1:exon

position:553379:1
position: 553379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117465913
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465913
product: uncharacterized LOC117465913, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034109006.1
SIO_010081: LOC117465913
subclass of: SO_0000673
so part of: LOC117465913
location: join(549615..550236,550379..550621,551262..551452,551588..551743,551987..552079,553379..553899)
location: region:549615-553899:1
so has part: feature:549615-550236:1:exon
so has part: feature:550379-550621:1:exon
so has part: feature:551262-551452:1:exon
so has part: feature:551588-551743:1:exon
so has part: feature:551987-552079:1:exon
so has part: feature:553379-553899:1:exon

position:549615:1
position: 549615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549615-550236:1:exon

position:550236:1
position: 550236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550379-550621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551262-551452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551588-551743:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551987-552079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:553379-553899:1:exon

LOC117465913
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465913
product: uncharacterized LOC117465913, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034109005.1
SIO_010081: LOC117465913
subclass of: SO_0000673
so part of: LOC117465913
location: join(550943..551452,551588..551743,551987..552079,553379..553899)
location: region:550943-553899:1
so has part: feature:550943-551452:1:exon
so has part: feature:551588-551743:1:exon
so has part: feature:551987-552079:1:exon
so has part: feature:553379-553899:1:exon

position:550943:1
position: 550943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550943-551452:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551588-551743:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551987-552079:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553379-553899:1:exon

LOC117465913
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117465913 isoform X1
translation: MIKFIKYPKDYQCEEVAAALTRAHPCLGQLGSKTGFGGWKQSLKYKMQNYRTKLGRLGHPEILVNSLKHKKTGQGKAAANIKKTRKAEVNYIPLHPKGETTESLENERIALLSELKKRDNEVVIKAKMEKTFSHRRLEIVEQRPLIGDFKCRWPALFQQSEVNAEFLRITTSPLQSKFTWQLDHFSDKLLKIFKTKGGLKGHKIKEALAISDSFENIHIKRGCILRSIAIYLDEDPDSFFKEYQMPRGANTVMGIYTLQRDVDGQPEDVGIVIEGNIVMDNLGSVIVGFVMLLGLIYALDLSFPDNLKHTFEFKQKVVMDLDGHKLDGQIESLKIKLFD
SIO_010081: LOC117465913
subclass of: SO_0000673
so part of: LOC117465913
location: join(550970..551452,551588..551743,551987..552079,553379..553666)
location: region:550970-553666:1
so has part: feature:550970-551452:1:exon
so has part: feature:551588-551743:1:exon
so has part: feature:551987-552079:1:exon
so has part: feature:553379-553666:1:exon

XP_033964896.1
type: Protein
SIO_000068: ncbiprotein

position:550970:1
position: 550970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553666:1
position: 553666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550970-551452:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551588-551743:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551987-552079:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553379-553666:1:exon

LOC117465913
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117465913 isoform X2
translation: MEKTFSHRRLEIVEQRPLIGDFKCRWPALFQQSEVNAEFLRITTSPLQSKFTWQLDHFSDKLLKIFKTKGGLKGHKIKEALAISDSFENIHIKRGCILRSIAIYLDEDPDSFFKEYQMPRGANTVMGIYTLQRDVDGQPEDVGIVIEGNIVMDNLGSVIVGFVMLLGLIYALDLSFPDNLKHTFEFKQKVVMDLDGHKLDGQIESLKIKLFD
SIO_010081: LOC117465913
subclass of: SO_0000673
so part of: LOC117465913
location: join(551351..551452,551588..551743,551987..552079,553379..553666)
location: region:551351-553666:1
so has part: feature:551351-551452:1:exon
so has part: feature:551588-551743:1:exon
so has part: feature:551987-552079:1:exon
so has part: feature:553379-553666:1:exon

XP_033964897.1
type: Protein
SIO_000068: ncbiprotein

position:551351:1
position: 551351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551351-551452:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551588-551743:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551987-552079:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553379-553666:1:exon

LOC117465913
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117465913 isoform X2
translation: MEKTFSHRRLEIVEQRPLIGDFKCRWPALFQQSEVNAEFLRITTSPLQSKFTWQLDHFSDKLLKIFKTKGGLKGHKIKEALAISDSFENIHIKRGCILRSIAIYLDEDPDSFFKEYQMPRGANTVMGIYTLQRDVDGQPEDVGIVIEGNIVMDNLGSVIVGFVMLLGLIYALDLSFPDNLKHTFEFKQKVVMDLDGHKLDGQIESLKIKLFD
SIO_010081: LOC117465913
subclass of: SO_0000673
so part of: LOC117465913
location: join(551351..551452,551588..551743,551987..552079,553379..553666)
location: region:551351-553666:1
so has part: feature:551351-551452:1:exon
so has part: feature:551588-551743:1:exon
so has part: feature:551987-552079:1:exon
so has part: feature:553379-553666:1:exon

XP_033964898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:551351-551452:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551588-551743:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551987-552079:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553379-553666:1:exon

sema5a
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: sema5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 571985..765599
location: region:571985-765599:1
so has part: feature:571985-765599:1:exon
subclass of: SO_0000010

117466008
type: Gene
SIO_000068: ncbigene

position:571985:1
position: 571985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765599:1
position: 765599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571985-765599:1:exon

sema5a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: sema5a
product: sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034109137.1
SIO_010081: sema5a
subclass of: SO_0000673
so part of: sema5a
location: join(571985..572349,616474..616685,630731..630830,633051..633096,653694..653907,657848..658133,661243..661378,668312..668516,673421..673628,677089..677206,681214..681395,686316..686459,697018..697165,714817..715042,738273..738482,746154..746324,752301..752456,756906..756950,758062..758273,764339..765599)
location: region:571985-765599:1
so has part: feature:571985-572349:1:exon
so has part: feature:616474-616685:1:exon
so has part: feature:630731-630830:1:exon
so has part: feature:633051-633096:1:exon
so has part: feature:653694-653907:1:exon
so has part: feature:657848-658133:1:exon
so has part: feature:661243-661378:1:exon
so has part: feature:668312-668516:1:exon
so has part: feature:673421-673628:1:exon
so has part: feature:677089-677206:1:exon
so has part: feature:681214-681395:1:exon
so has part: feature:686316-686459:1:exon
so has part: feature:697018-697165:1:exon
so has part: feature:714817-715042:1:exon
so has part: feature:738273-738482:1:exon
so has part: feature:746154-746324:1:exon
so has part: feature:752301-752456:1:exon
so has part: feature:756906-756950:1:exon
so has part: feature:758062-758273:1:exon
so has part: feature:764339-765599:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:571985-572349:1:exon

position:572349:1
position: 572349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:616474-616685:1:exon

position:616474:1
position: 616474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616685:1
position: 616685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:630731-630830:1:exon

position:630731:1
position: 630731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630830:1
position: 630830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:633051-633096:1:exon

position:633051:1
position: 633051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633096:1
position: 633096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:653694-653907:1:exon

position:653694:1
position: 653694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653907:1
position: 653907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:657848-658133:1:exon

position:657848:1
position: 657848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658133:1
position: 658133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:661243-661378:1:exon

position:661243:1
position: 661243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661378:1
position: 661378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:668312-668516:1:exon

position:668312:1
position: 668312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668516:1
position: 668516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:673421-673628:1:exon

position:673421:1
position: 673421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673628:1
position: 673628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:677089-677206:1:exon

position:677089:1
position: 677089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677206:1
position: 677206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:681214-681395:1:exon

position:681214:1
position: 681214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681395:1
position: 681395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:686316-686459:1:exon

position:686316:1
position: 686316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686459:1
position: 686459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:697018-697165:1:exon

position:697018:1
position: 697018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697165:1
position: 697165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:714817-715042:1:exon

position:714817:1
position: 714817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:715042:1
position: 715042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:738273-738482:1:exon

position:738273:1
position: 738273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738482:1
position: 738482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:746154-746324:1:exon

position:746154:1
position: 746154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746324:1
position: 746324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:752301-752456:1:exon

position:752301:1
position: 752301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752456:1
position: 752456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:756906-756950:1:exon

position:756906:1
position: 756906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756950:1
position: 756950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:758062-758273:1:exon

position:758062:1
position: 758062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758273:1
position: 758273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:764339-765599:1:exon

position:764339:1
position: 764339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sema5a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: sema5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-5A
translation: MGRPVTQHALLLLQCMLVLRPGGVASRRGPVLLPESPCHKTEHPLVPHSEMEPWMCRFKAEGTVDYSQLTFDPGQNELIVGARNHLFRLNLEDLSLIQLTNLTEIHDQISGMARCPYNPLHNSTALITSSGELYAATAMDFSGRDPAIYRSLGGLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEHDCGRTVFSRAGRVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEIPFNYNELQGTFYLPELELLYGIFTTNVNSIAASAVCAFNLSAISQVFNGPFKYQENSRSAWLPYPNPNPDFQCGTIDSGSYVNLTERNLPDAQKFLLMHEVVQPVVPVPYFMEDNVRFTHVAVDVVQGKDTLLHIIYLATDYGTIRKVLSPLNQSTGSCLLEEIELFPPRKRQPIRSLLILHSRSELYVGVRDQVIKIPLKRCSYHKSREACIGARDPYCGWDLLLKKCTTLEESVRMSQWEQSISKCPVRNVTVDGGFGTWSGWSMCSHNDGGSAGSCLCRTRGCNNPAPQCGGQHCFGISVEVANCSRNGAWTPWTSWSPCSTTCGIGFQVRQRSCSNPTPCHGGRVCVGQNREERYCNEHLPCPTHVYWSAWSAWDRCTQPCGGGIQSRRRTCENGDECPGCGQEYQSCNMLPCPDLKKTTPWTPWTPVNISDNGGHYEQRFRYTCKARIPDPSLMEVGRQRIEMRYCSSDGSTGCSTDGEVLRLGRISGHTLNGGWASWSSWSQCSRDCSRGIRSRKRTCSNPEPKHGGQTCLGALQEYQECNISPCPVDGSWSCWSSWSKCSVTCGGGHYMRTRTCSNPPPEYGGDICLGLHTEEALCHTQSCPESWSKWSEWSHCETNGAQARVRHCDVLFPTGNQCSGNNSETRPCPPDSNFIPEISIARSSQEERRCGDFNLFHMIAVGLSSSVLGCLVTLLVYSYCQRYTQQAHDATVIHPISAAPLNTSITNHINKLDKYDSVEAIKAFNKNNLILEERNKYFNPQLAGKTYTNAYFTDLNTYDDY
SIO_010081: sema5a
subclass of: SO_0000673
so part of: sema5a
location: join(616538..616685,630731..630830,633051..633096,653694..653907,657848..658133,661243..661378,668312..668516,673421..673628,677089..677206,681214..681395,686316..686459,697018..697165,714817..715042,738273..738482,746154..746324,752301..752456,756906..756950,758062..758273,764339..764458)
location: region:616538-764458:1
so has part: feature:616538-616685:1:exon
so has part: feature:630731-630830:1:exon
so has part: feature:633051-633096:1:exon
so has part: feature:653694-653907:1:exon
so has part: feature:657848-658133:1:exon
so has part: feature:661243-661378:1:exon
so has part: feature:668312-668516:1:exon
so has part: feature:673421-673628:1:exon
so has part: feature:677089-677206:1:exon
so has part: feature:681214-681395:1:exon
so has part: feature:686316-686459:1:exon
so has part: feature:697018-697165:1:exon
so has part: feature:714817-715042:1:exon
so has part: feature:738273-738482:1:exon
so has part: feature:746154-746324:1:exon
so has part: feature:752301-752456:1:exon
so has part: feature:756906-756950:1:exon
so has part: feature:758062-758273:1:exon
so has part: feature:764339-764458:1:exon

XP_033965028.1
type: Protein
SIO_000068: ncbiprotein

position:616538:1
position: 616538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764458:1
position: 764458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616538-616685:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:630731-630830:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:633051-633096:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:653694-653907:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:657848-658133:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:661243-661378:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668312-668516:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:673421-673628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:677089-677206:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:681214-681395:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:686316-686459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:697018-697165:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:714817-715042:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:738273-738482:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:746154-746324:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:752301-752456:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:756906-756950:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:758062-758273:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:764339-764458:1:exon

LOC117465822
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465822
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(801889..820953)
location: region:801889-820953:-1
so has part: feature:801889-820953:-1:exon
subclass of: SO_0000011

117465822
type: Gene
SIO_000068: ncbigene

position:801889:-1
position: 801889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820953:-1
position: 820953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:801889-820953:-1:exon

LOC117465822
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117465822
product: uncharacterized LOC117465822
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004554216.1
SIO_010081: LOC117465822
subclass of: SO_0000673
so part of: LOC117465822
location: complement(join(801889..801900,803176..803179,819872..820031,820285..820386,820603..820953))
location: region:801889-820953:-1
so has part: feature:820603-820953:-1:exon
so has part: feature:820285-820386:-1:exon
so has part: feature:819872-820031:-1:exon
so has part: feature:803176-803179:-1:exon
so has part: feature:801889-801900:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:820603-820953:-1:exon

position:820603:-1
position: 820603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:820285-820386:-1:exon

position:820285:-1
position: 820285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820386:-1
position: 820386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:819872-820031:-1:exon

position:819872:-1
position: 819872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820031:-1
position: 820031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:803176-803179:-1:exon

position:803176:-1
position: 803176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803179:-1
position: 803179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:801889-801900:-1:exon

position:801900:-1
position: 801900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

timm21
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: timm21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(821942..824850)
location: region:821942-824850:-1
so has part: feature:821942-824850:-1:exon
subclass of: SO_0000010

117465743
type: Gene
SIO_000068: ncbigene

position:821942:-1
position: 821942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824850:-1
position: 824850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821942-824850:-1:exon

timm21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: timm21
product: translocase of inner mitochondrial membrane 21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_034108740.1
SIO_010081: timm21
subclass of: SO_0000673
so part of: timm21
location: complement(join(821942..822075,822157..822262,822422..822495,823364..823461,823535..823597,824334..824850))
location: region:821942-824850:-1
so has part: feature:824334-824850:-1:exon
so has part: feature:823535-823597:-1:exon
so has part: feature:823364-823461:-1:exon
so has part: feature:822422-822495:-1:exon
so has part: feature:822157-822262:-1:exon
so has part: feature:821942-822075:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:824334-824850:-1:exon

position:824334:-1
position: 824334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:823535-823597:-1:exon

position:823535:-1
position: 823535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823597:-1
position: 823597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:823364-823461:-1:exon

position:823364:-1
position: 823364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823461:-1
position: 823461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:822422-822495:-1:exon

position:822422:-1
position: 822422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822495:-1
position: 822495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:822157-822262:-1:exon

position:822157:-1
position: 822157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822262:-1
position: 822262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:821942-822075:-1:exon

position:822075:-1
position: 822075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

timm21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: timm21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit Tim21
translation: MAYTQILRALHRTATHKYTHVSFLVHTHHGCIIRDTLRNACTVSGLTLQRTEAPRCFLPVLSCFLRAQRGVCLRSAARNQSSSSGDRDRSVSRYPSGSPEPSAAQKVIAAGRDFTYLIVVLIGLGVTGGLLYVVFQELFSTSSPNKVYGKAFNIIRLDPGVVGAFGEPIKCYGETTRRGRRQQVSHHEFLKDGVKHMRLKFYVEGSEPGRKGTVHTESRENPKTGKYEFRYIIVEMDTYPRRTIIVEDNR
SIO_010081: timm21
subclass of: SO_0000673
so part of: timm21
location: complement(join(821983..822075,822157..822262,822422..822495,823364..823461,823535..823597,824334..824652))
location: region:821983-824652:-1
so has part: feature:824334-824652:-1:exon
so has part: feature:823535-823597:-1:exon
so has part: feature:823364-823461:-1:exon
so has part: feature:822422-822495:-1:exon
so has part: feature:822157-822262:-1:exon
so has part: feature:821983-822075:-1:exon

XP_033964631.1
type: Protein
SIO_000068: ncbiprotein

position:821983:-1
position: 821983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824652:-1
position: 824652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824334-824652:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823535-823597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823364-823461:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822422-822495:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822157-822262:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821983-822075:-1:exon

neto1l
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: neto1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(828082..916522)
location: region:828082-916522:-1
so has part: feature:828082-916522:-1:exon
subclass of: SO_0000010

117466068
type: Gene
SIO_000068: ncbigene

position:828082:-1
position: 828082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916522:-1
position: 916522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:828082-916522:-1:exon

neto1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: neto1l
product: neuropilin (NRP) and tolloid (TLL)-like 1, like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034109195.1
SIO_010081: neto1l
subclass of: SO_0000673
so part of: neto1l
location: complement(join(828082..829333,830050..830662,834802..834915,842938..843083,844592..844814,851195..851236,912748..912996,913297..913431,913525..913581,915849..916522))
location: region:828082-916522:-1
so has part: feature:915849-916522:-1:exon
so has part: feature:913525-913581:-1:exon
so has part: feature:913297-913431:-1:exon
so has part: feature:912748-912996:-1:exon
so has part: feature:851195-851236:-1:exon
so has part: feature:844592-844814:-1:exon
so has part: feature:842938-843083:-1:exon
so has part: feature:834802-834915:-1:exon
so has part: feature:830050-830662:-1:exon
so has part: feature:828082-829333:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:915849-916522:-1:exon

position:915849:-1
position: 915849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:913525-913581:-1:exon

position:913525:-1
position: 913525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913581:-1
position: 913581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:913297-913431:-1:exon

position:913297:-1
position: 913297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913431:-1
position: 913431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:912748-912996:-1:exon

position:912748:-1
position: 912748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912996:-1
position: 912996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:851195-851236:-1:exon

position:851195:-1
position: 851195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851236:-1
position: 851236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:844592-844814:-1:exon

position:844592:-1
position: 844592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844814:-1
position: 844814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:842938-843083:-1:exon

position:842938:-1
position: 842938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843083:-1
position: 843083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:834802-834915:-1:exon

position:834802:-1
position: 834802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834915:-1
position: 834915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:830050-830662:-1:exon

position:830050:-1
position: 830050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830662:-1
position: 830662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:828082-829333:-1:exon

position:829333:-1
position: 829333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

neto1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: neto1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 1
translation: MVHGHSFHHVVASLLILGLSGATRKDTAAKNNSGVKPAGQCGTWVKEAEGGIFTSPNYPNKYPPTTECVYILEAPPRQCIDLHFGENYSIESSWECKFDNIEVRDGPFGFSPILGRYCGQHSPPDIRSSGRYLWIKFVTDGELEAVGFSASYNFTADPDFADQGVPPPLPXVQEAVCRPGFIAEPLHRALDNQSNEGDGLFPPSCPHVFKPPLCFGQIYLRFLDYEMANSNECKRNFVAVYDGGSSVEDLKNKFCSTVANDIMLVSTLGVIRMWADEASRKSRFRILFTTYQEPPCDADAFFCHSNMCINSTLVCNGMQNCVYPWDENQCKEKRKANILDNLNNTNGTIIGVTCCIVLLLLIVSVIVQIKQPRKKYILRREDFDPTMFQEVFEPPHYELCTLRSANANASSDLVDLAEDFENYHALRRASSRCIHDHHCGSSSNPGSAHLSQLSLSGRGSRGNLSRDAAALLTDLPQQNMAVRPLLPTSGNRRSILVMKHSYSQEAADNGCDMDDEMEEVPTTSHRLSRHEKAVQRFCLIGSLSKHESEYNTTRV
SIO_010081: neto1l
subclass of: SO_0000673
so part of: neto1l
location: complement(join(829273..829333,830050..830662,834802..834915,842938..843083,844592..844814,851195..851236,912748..912996,913297..913431,913525..913581,915849..915876))
location: region:829273-915876:-1
so has part: feature:915849-915876:-1:exon
so has part: feature:913525-913581:-1:exon
so has part: feature:913297-913431:-1:exon
so has part: feature:912748-912996:-1:exon
so has part: feature:851195-851236:-1:exon
so has part: feature:844592-844814:-1:exon
so has part: feature:842938-843083:-1:exon
so has part: feature:834802-834915:-1:exon
so has part: feature:830050-830662:-1:exon
so has part: feature:829273-829333:-1:exon

XP_033965086.1
type: Protein
SIO_000068: ncbiprotein

position:829273:-1
position: 829273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915876:-1
position: 915876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:915849-915876:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:913525-913581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:913297-913431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912748-912996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851195-851236:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:844592-844814:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:842938-843083:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:834802-834915:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830050-830662:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:829273-829333:-1:exon

LOC117466009
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466009
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(920688..931610)
location: region:920688-931610:-1
so has part: feature:920688-931610:-1:exon
subclass of: SO_0000010

117466009
type: Gene
SIO_000068: ncbigene

position:920688:-1
position: 920688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931610:-1
position: 931610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920688-931610:-1:exon

LOC117466009
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117466009
product: neuropilin and tolloid-like protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034109138.1
SIO_010081: LOC117466009
subclass of: SO_0000673
so part of: LOC117466009
location: complement(join(920688..920785,928091..928339,928637..928771,928865..928921,931195..931610))
location: region:920688-931610:-1
so has part: feature:931195-931610:-1:exon
so has part: feature:928865-928921:-1:exon
so has part: feature:928637-928771:-1:exon
so has part: feature:928091-928339:-1:exon
so has part: feature:920688-920785:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:931195-931610:-1:exon

position:931195:-1
position: 931195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:928865-928921:-1:exon

position:928865:-1
position: 928865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928921:-1
position: 928921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:928637-928771:-1:exon

position:928637:-1
position: 928637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928771:-1
position: 928771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:928091-928339:-1:exon

position:928091:-1
position: 928091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928339:-1
position: 928339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:920688-920785:-1:exon

position:920785:-1
position: 920785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117466009
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117466009
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 1
translation: MVHGHSFHHVVASLLILGLSGATRKDTAAKNNSGVKPAGQCGTWVKEAEGGIFTSPNYPNKYPPTTECVYILEAPPRQCIDLHFGENYSIESSWECKFDNIEVRDGPFGFSPILGRYCGQHSPPDIRSSGRYLWIKFVTDGELEAVGFSASYNFTAGYIFASRISTTTAGAKKHFMGQSNLIFQSFYL
SIO_010081: LOC117466009
subclass of: SO_0000673
so part of: LOC117466009
location: complement(join(920688..920785,928091..928339,928637..928771,928865..928921,931195..931222))
location: region:920688-931222:-1
so has part: feature:931195-931222:-1:exon
so has part: feature:928865-928921:-1:exon
so has part: feature:928637-928771:-1:exon
so has part: feature:928091-928339:-1:exon
so has part: feature:920688-920785:-1:exon

XP_033965029.1
type: Protein
SIO_000068: ncbiprotein

position:931222:-1
position: 931222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931195-931222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928865-928921:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:928637-928771:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928091-928339:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:920688-920785:-1:exon

LOC117466011
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466011
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 998450..999388
location: region:998450-999388:1
so has part: feature:998450-999388:1:exon
subclass of: SO_0000010

117466011
type: Gene
SIO_000068: ncbigene

position:998450:1
position: 998450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999388:1
position: 999388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:998450-999388:1:exon

LOC117466011
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117466011
product: repetitive proline-rich cell wall protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_034109139.1
SIO_010081: LOC117466011
subclass of: SO_0000673
so part of: LOC117466011
location: 998450..999388
location: region:998450-999388:1
so has part: feature:998450-999388:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:998450-999388:1:exon

LOC117466011
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117466011
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: repetitive proline-rich cell wall protein 2-like
translation: MVSLCSQKGQASDTAGSITETNALTATAAWRSPTGGPPLEDPHWRTPTGGPPLEDPHWRSPTGGPPLEDPHWRSPTGGPPLEDPHWRSPTGGPPLEVPHWRSPTGGPPTGGPPTGGPPLEVPHWRSPTGGPPLEDPHWRSPTGGPPTGGPPTGGPPTGGPPLEVPPLEVPPLEDPPLEVPHWRSPHWRTPTGGPPTGGPPTGGPPLEVPPLEVPHWRSPHWRTPHWRTPTGGPPLEVPHWRSPHWRTPTGGPPTGGPPLEVPHWRSPTGGPPTGGPPLEDPHWRSPHWRTPTGGPPLEVPHWRSPTGGPHPS
SIO_010081: LOC117466011
subclass of: SO_0000673
so part of: LOC117466011
location: 998450..999388
location: region:998450-999388:1
so has part: feature:998450-999388:1:exon

XP_033965030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:998450-999388:1:exon

kcnb2
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: kcnb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1013237..1020464
location: region:1013237-1020464:1
so has part: feature:1013237-1020464:1:exon
subclass of: SO_0000010

117466012
type: Gene
SIO_000068: ncbigene

position:1013237:1
position: 1013237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020464:1
position: 1020464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1013237-1020464:1:exon

kcnb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: kcnb2
product: potassium voltage-gated channel subfamily B member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034109140.1
SIO_010081: kcnb2
subclass of: SO_0000673
so part of: kcnb2
location: join(1013237..1013691,1016535..1020464)
location: region:1013237-1020464:1
so has part: feature:1013237-1013691:1:exon
so has part: feature:1016535-1020464:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1013237-1013691:1:exon

position:1013691:1
position: 1013691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1016535-1020464:1:exon

position:1016535:1
position: 1016535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

kcnb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: kcnb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily B member 2
translation: MFLLSFLTCSSSLLQILAIISILFIILSTIALSLNTLPDLQVMDEFGQASDNPQLAHVEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYYVTLFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLKRSYNELGLLILFLAMGIMIFSSLVFFAEKDEDATKFTSIPASFWWATITMTTVGYGDIYPQTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNLKDAFARSMELMDVVVQKGEDKTSLENHMSPERWGSTPRHASSESDLKSPASQNPEMQNSPQHVTVNTTGSPQRMSRTPQHLNVQKLEEMYNQMSKSQSLSNLNSSMSTLSTTAPVSPRKPQSPNATLKEEVELEMTEVQSCSSDRKDSAYRKEDTGPCRLRHPRAPPYLELRSMDEGVQLKDGLYESAGDGSELLKEASFENSALEAASRGTDALTIKGLNANFPKSPAEGPLTPPSTTSPGDISSSILEDETPDGETSPLIPSTEELLPISEEETCPLSPKRLVVDTPPGDEHESTENHEEKHRMEVAGASVSPLSPNSAQHCAQGEDVKAESNQNGHKVENHMFTSDIHLIPGDGSLSPSCETSM
SIO_010081: kcnb2
subclass of: SO_0000673
so part of: kcnb2
location: join(1013237..1013691,1016535..1018011)
location: region:1013237-1018011:1
so has part: feature:1013237-1013691:1:exon
so has part: feature:1016535-1018011:1:exon

XP_033965031.1
type: Protein
SIO_000068: ncbiprotein

position:1018011:1
position: 1018011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1013237-1013691:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1016535-1018011:1:exon

LOC117465818
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1023507..1027763
location: region:1023507-1027763:1
so has part: feature:1023507-1027763:1:exon
subclass of: SO_0000010

117465818
type: Gene
SIO_000068: ncbigene

position:1023507:1
position: 1023507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027763:1
position: 1027763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023507-1027763:1:exon

LOC117465818
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465818
product: telomeric repeat-binding factor 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_034108855.1
SIO_010081: LOC117465818
subclass of: SO_0000673
so part of: LOC117465818
location: join(1023507..1023678,1024378..1024467,1025056..1025183,1025308..1025394,1025500..1025649,1026387..1026556,1027022..1027119,1027193..1027260,1027341..1027763)
location: region:1023507-1027763:1
so has part: feature:1023507-1023678:1:exon
so has part: feature:1024378-1024467:1:exon
so has part: feature:1025056-1025183:1:exon
so has part: feature:1025308-1025394:1:exon
so has part: feature:1025500-1025649:1:exon
so has part: feature:1026387-1026556:1:exon
so has part: feature:1027022-1027119:1:exon
so has part: feature:1027193-1027260:1:exon
so has part: feature:1027341-1027763:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1023507-1023678:1:exon

position:1023678:1
position: 1023678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1024378-1024467:1:exon

position:1024378:1
position: 1024378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024467:1
position: 1024467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1025056-1025183:1:exon

position:1025056:1
position: 1025056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025183:1
position: 1025183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1025308-1025394:1:exon

position:1025308:1
position: 1025308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025394:1
position: 1025394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1025500-1025649:1:exon

position:1025500:1
position: 1025500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025649:1
position: 1025649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1026387-1026556:1:exon

position:1026387:1
position: 1026387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026556:1
position: 1026556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1027022-1027119:1:exon

position:1027022:1
position: 1027022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027119:1
position: 1027119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1027193-1027260:1:exon

position:1027193:1
position: 1027193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027260:1
position: 1027260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1027341-1027763:1:exon

position:1027341:1
position: 1027341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117465818
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465818
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: telomeric repeat-binding factor 1-like
translation: MAAENHNRAMCAFSQVRAVTTGWIVDFMFLSLCRRFKEGXFEDFNEIIQTLEAVTECPAKELHEDKTMICAFLARVMHGKQLDVQFEENEDMLPLMSAAKIWADIEHTVAEQRLFIDILELLFVQSVAVCLISDQISHACLALKWFEKNHTLSQNLCSKVSSMVRKKDPRDPLLNSYSFTRLLETIKTYLDAYLEKNPSDYLVKEATKMLQASPESEKSEDDLTQDDLAQDDLTQDDLTQNGSTQDDLAQDGNIRTRKNKTTKRKLLPTNFMEEWEIDSCRKPFLSVKRIPESDVSQVTSMSMETSSILKRRKSPRKWTDKLDRHLKRGVKRHGVGKWAQMLLDVDLDFEGRTGVMLKDRWRILMKYQG
SIO_010081: LOC117465818
subclass of: SO_0000673
so part of: LOC117465818
location: join(1023523..1023678,1024378..1024467,1025056..1025183,1025308..1025394,1025500..1025649,1026387..1026556,1027022..1027119,1027193..1027260,1027341..1027502)
location: region:1023523-1027502:1
so has part: feature:1023523-1023678:1:exon
so has part: feature:1024378-1024467:1:exon
so has part: feature:1025056-1025183:1:exon
so has part: feature:1025308-1025394:1:exon
so has part: feature:1025500-1025649:1:exon
so has part: feature:1026387-1026556:1:exon
so has part: feature:1027022-1027119:1:exon
so has part: feature:1027193-1027260:1:exon
so has part: feature:1027341-1027502:1:exon

XP_033964746.1
type: Protein
SIO_000068: ncbiprotein

position:1023523:1
position: 1023523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027502:1
position: 1027502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023523-1023678:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1024378-1024467:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1025056-1025183:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1025308-1025394:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1025500-1025649:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1026387-1026556:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1027022-1027119:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1027193-1027260:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1027341-1027502:1:exon

LOC117465819
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1027765..1029122)
location: region:1027765-1029122:-1
so has part: feature:1027765-1029122:-1:exon
subclass of: SO_0000011

117465819
type: Gene
SIO_000068: ncbigene

position:1027765:-1
position: 1027765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029122:-1
position: 1029122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1027765-1029122:-1:exon

LOC117465819
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117465819
product: uncharacterized LOC117465819
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004554215.1
SIO_010081: LOC117465819
subclass of: SO_0000673
so part of: LOC117465819
location: complement(join(1027765..1028462,1028559..1029122))
location: region:1027765-1029122:-1
so has part: feature:1028559-1029122:-1:exon
so has part: feature:1027765-1028462:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1028559-1029122:-1:exon

position:1028559:-1
position: 1028559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1027765-1028462:-1:exon

position:1028462:-1
position: 1028462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117465884
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1033515..1037909
location: region:1033515-1037909:1
so has part: feature:1033515-1037909:1:exon
subclass of: SO_0000010

117465884
type: Gene
SIO_000068: ncbigene

position:1033515:1
position: 1033515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037909:1
position: 1037909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1033515-1037909:1:exon

LOC117465884
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465884
product: telomeric repeat-binding factor 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_034108953.1
SIO_010081: LOC117465884
subclass of: SO_0000673
so part of: LOC117465884
location: join(1033515..1033717,1034419..1034507,1035096..1035223,1035348..1035434,1035540..1035689,1036504..1036703,1037168..1037265,1037339..1037406,1037487..1037909)
location: region:1033515-1037909:1
so has part: feature:1033515-1033717:1:exon
so has part: feature:1034419-1034507:1:exon
so has part: feature:1035096-1035223:1:exon
so has part: feature:1035348-1035434:1:exon
so has part: feature:1035540-1035689:1:exon
so has part: feature:1036504-1036703:1:exon
so has part: feature:1037168-1037265:1:exon
so has part: feature:1037339-1037406:1:exon
so has part: feature:1037487-1037909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1033515-1033717:1:exon

position:1033717:1
position: 1033717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1034419-1034507:1:exon

position:1034419:1
position: 1034419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034507:1
position: 1034507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1035096-1035223:1:exon

position:1035096:1
position: 1035096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035223:1
position: 1035223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1035348-1035434:1:exon

position:1035348:1
position: 1035348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035434:1
position: 1035434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1035540-1035689:1:exon

position:1035540:1
position: 1035540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035689:1
position: 1035689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1036504-1036703:1:exon

position:1036504:1
position: 1036504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1036703:1
position: 1036703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1037168-1037265:1:exon

position:1037168:1
position: 1037168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037265:1
position: 1037265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1037339-1037406:1:exon

position:1037339:1
position: 1037339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037406:1
position: 1037406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1037487-1037909:1:exon

position:1037487:1
position: 1037487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117465884
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465884
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: telomeric repeat-binding factor 1-like
translation: MAAENHNRAMCAFSQVRAVTTGWIVDFMFLSLCRRFKEGKFEEFNEIIQTLEAVTECPAKELHEDXTMICAFLARVMHGKQLDVQFEENEDMLPLMSAAKIWADIEHTVAEQRLFIDILELLFVQSVAVCLISDQISHACLALKWFEKNHTLSQNLCSKVSSMVRKKDPRDPLLNSYSFTRLLETIKTYLDAYLEKNPSDYLVKEATKMLQASPESEKSEDDLTQDDLAQDDAAQDDATQDDSTQDDLTQNGSTQDDLAQDGNIRTRKNKTTKRKLLPTNFMEEWEIDSCRKPFLSVKRIPESDVSQVTSMSMETSSILKRRKSPRKWTDKLDRHLKRGVKRHGVGKWAQMLLDVDLDFEGRTGVMLKDRWRILMKYQG
SIO_010081: LOC117465884
subclass of: SO_0000673
so part of: LOC117465884
location: join(1033561..1033717,1034419..1034507,1035096..1035223,1035348..1035434,1035540..1035689,1036504..1036703,1037168..1037265,1037339..1037406,1037487..1037648)
location: region:1033561-1037648:1
so has part: feature:1033561-1033717:1:exon
so has part: feature:1034419-1034507:1:exon
so has part: feature:1035096-1035223:1:exon
so has part: feature:1035348-1035434:1:exon
so has part: feature:1035540-1035689:1:exon
so has part: feature:1036504-1036703:1:exon
so has part: feature:1037168-1037265:1:exon
so has part: feature:1037339-1037406:1:exon
so has part: feature:1037487-1037648:1:exon

XP_033964844.1
type: Protein
SIO_000068: ncbiprotein

position:1033561:1
position: 1033561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037648:1
position: 1037648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1033561-1033717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1034419-1034507:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1035096-1035223:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1035348-1035434:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1035540-1035689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1036504-1036703:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1037168-1037265:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1037339-1037406:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1037487-1037648:1:exon

LOC117465885
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1037911..1052212)
location: region:1037911-1052212:-1
so has part: feature:1037911-1052212:-1:exon
subclass of: SO_0000010

117465885
type: Gene
SIO_000068: ncbigene

position:1037911:-1
position: 1037911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052212:-1
position: 1052212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037911-1052212:-1:exon

LOC117465885
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465885
product: somatomedin-B and thrombospondin type-1 domain-containing protein
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 5 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034108954.1
SIO_010081: LOC117465885
subclass of: SO_0000673
so part of: LOC117465885
location: complement(join(1037911..1038606,1040446..1040622,1044180..1044270,1046679..1046869,1051811..1052212))
location: region:1037911-1052212:-1
so has part: feature:1051811-1052212:-1:exon
so has part: feature:1046679-1046869:-1:exon
so has part: feature:1044180-1044270:-1:exon
so has part: feature:1040446-1040622:-1:exon
so has part: feature:1037911-1038606:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1051811-1052212:-1:exon

position:1051811:-1
position: 1051811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1046679-1046869:-1:exon

position:1046679:-1
position: 1046679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046869:-1
position: 1046869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1044180-1044270:-1:exon

position:1044180:-1
position: 1044180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1044270:-1
position: 1044270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1040446-1040622:-1:exon

position:1040446:-1
position: 1040446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1040622:-1
position: 1040622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1037911-1038606:-1:exon

position:1038606:-1
position: 1038606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117465885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465885
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 5 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: somatomedin-B and thrombospondin type-1 domain-containing protein
translation: MGSSAEFRVSVLLVLVSSVGNILPVSGGCSGKCCGGRDLSCETTDWRMDRVHGTCFCDKGCDKTRDCCFDYFTECPAQDCSVSDWSFWSGCAESCRPSVRTRGQKRGESAPVTAGGACPNLRQREAAGRYRGPAGRHCGLLSGPAFITSMEFGKGRPRHDKYGNPLDPGFCVEFTFQSRTPHCSVQNRPHTHWMRYITEGYKVCVACEPPAMKNGTGRCQGDGLQDDKEVLLHWQAVGNHRCSGTWKKIQKTQRCDCPPQHSFVFI
SIO_010081: LOC117465885
subclass of: SO_0000673
so part of: LOC117465885
location: complement(join(1038489..1038606,1040446..1040622,1044180..1044270,1046679..1046869,1051811..1052039))
location: region:1038489-1052039:-1
so has part: feature:1051811-1052039:-1:exon
so has part: feature:1046679-1046869:-1:exon
so has part: feature:1044180-1044270:-1:exon
so has part: feature:1040446-1040622:-1:exon
so has part: feature:1038489-1038606:-1:exon

XP_033964845.1
type: Protein
SIO_000068: ncbiprotein

position:1038489:-1
position: 1038489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052039:-1
position: 1052039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051811-1052039:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1046679-1046869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044180-1044270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1040446-1040622:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1038489-1038606:-1:exon

si:ch211-171b20.3
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: si:ch211-171b20.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1063499..1072212)
location: region:1063499-1072212:-1
so has part: feature:1063499-1072212:-1:exon
subclass of: SO_0000010

117465932
type: Gene
SIO_000068: ncbigene

position:1063499:-1
position: 1063499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072212:-1
position: 1072212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063499-1072212:-1:exon

si:ch211-171b20.3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: si:ch211-171b20.3
product: uncharacterized si:ch211-171b20.3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034109039.1
SIO_010081: si:ch211-171b20.3
subclass of: SO_0000673
so part of: si:ch211-171b20.3
location: complement(join(1063499..1064439,1067312..1067367,1067452..1067583,1068582..1068699,1070269..1070333,1071069..1071114,1071928..1072212))
location: region:1063499-1072212:-1
so has part: feature:1071928-1072212:-1:exon
so has part: feature:1071069-1071114:-1:exon
so has part: feature:1070269-1070333:-1:exon
so has part: feature:1068582-1068699:-1:exon
so has part: feature:1067452-1067583:-1:exon
so has part: feature:1067312-1067367:-1:exon
so has part: feature:1063499-1064439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1071928-1072212:-1:exon

position:1071928:-1
position: 1071928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1071069-1071114:-1:exon

position:1071069:-1
position: 1071069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071114:-1
position: 1071114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1070269-1070333:-1:exon

position:1070269:-1
position: 1070269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070333:-1
position: 1070333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1068582-1068699:-1:exon

position:1068582:-1
position: 1068582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068699:-1
position: 1068699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1067452-1067583:-1:exon

position:1067452:-1
position: 1067452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067583:-1
position: 1067583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1067312-1067367:-1:exon

position:1067312:-1
position: 1067312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067367:-1
position: 1067367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1063499-1064439:-1:exon

position:1064439:-1
position: 1064439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

si:ch211-171b20.3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: si:ch211-171b20.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein si:ch211-171b20.3
translation: MRGRCGMMTFQVNASLLPTANKALTSDRGSSCSHPGLEAPCSAYRSSGRGVGNIRTKLPLIQPLSRPRDWNTWSGGFMVGGSPHSAREDNDITGRHFLFEKQCVQPERTRTVVPPLQRGSLHPFSLSKGLSHSRGGRPFTLGYAPSYDLTSSPALVFPSSPALVFPSSLILSGRNSFSVESCKLNRPKVNYPASSLLHGKDNPKSPSYPDPVLGASRSFFHRISELSSLEGETVRQEKLKKMRKPKKPPS
SIO_010081: si:ch211-171b20.3
subclass of: SO_0000673
so part of: si:ch211-171b20.3
location: complement(join(1064300..1064439,1067312..1067367,1067452..1067583,1068582..1068699,1070269..1070333,1071069..1071114,1071928..1072123))
location: region:1064300-1072123:-1
so has part: feature:1071928-1072123:-1:exon
so has part: feature:1071069-1071114:-1:exon
so has part: feature:1070269-1070333:-1:exon
so has part: feature:1068582-1068699:-1:exon
so has part: feature:1067452-1067583:-1:exon
so has part: feature:1067312-1067367:-1:exon
so has part: feature:1064300-1064439:-1:exon

XP_033964930.1
type: Protein
SIO_000068: ncbiprotein

position:1064300:-1
position: 1064300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072123:-1
position: 1072123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1071928-1072123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1071069-1071114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070269-1070333:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1068582-1068699:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1067452-1067583:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1067312-1067367:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1064300-1064439:-1:exon

LOC117465559
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1073050..1079187)
location: region:1073050-1079187:-1
so has part: feature:1073050-1079187:-1:exon
subclass of: SO_0000010

117465559
type: Gene
SIO_000068: ncbigene

position:1073050:-1
position: 1073050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079187:-1
position: 1079187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1073050-1079187:-1:exon

LOC117465559
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465559
product: 60S ribosomal protein L7-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_034108439.1
SIO_010081: LOC117465559
subclass of: SO_0000673
so part of: LOC117465559
location: complement(join(1073050..1073099,1073506..1073530,1074663..1074687,1075094..1075309,1075887..1075996,1076618..1076755,1077210..1077376,1078525..1078624,1079109..1079187))
location: region:1073050-1079187:-1
so has part: feature:1079109-1079187:-1:exon
so has part: feature:1078525-1078624:-1:exon
so has part: feature:1077210-1077376:-1:exon
so has part: feature:1076618-1076755:-1:exon
so has part: feature:1075887-1075996:-1:exon
so has part: feature:1075094-1075309:-1:exon
so has part: feature:1074663-1074687:-1:exon
so has part: feature:1073506-1073530:-1:exon
so has part: feature:1073050-1073099:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1079109-1079187:-1:exon

position:1079109:-1
position: 1079109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1078525-1078624:-1:exon

position:1078525:-1
position: 1078525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078624:-1
position: 1078624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1077210-1077376:-1:exon

position:1077210:-1
position: 1077210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077376:-1
position: 1077376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1076618-1076755:-1:exon

position:1076618:-1
position: 1076618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076755:-1
position: 1076755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1075887-1075996:-1:exon

position:1075887:-1
position: 1075887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075996:-1
position: 1075996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1075094-1075309:-1:exon

position:1075094:-1
position: 1075094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075309:-1
position: 1075309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1074663-1074687:-1:exon

position:1074663:-1
position: 1074663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074687:-1
position: 1074687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1073506-1073530:-1:exon

position:1073506:-1
position: 1073506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073530:-1
position: 1073530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1073050-1073099:-1:exon

position:1073099:-1
position: 1073099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117466124
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466124
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1073360..1073451)
location: region:1073360-1073451:-1
so has part: feature:1073360-1073451:-1:exon
subclass of: SO_0000578

117466124
type: Gene
SIO_000068: ncbigene

position:1073360:-1
position: 1073360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073451:-1
position: 1073451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1073360-1073451:-1:exon

LOC117466124
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466124
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554245.1
SIO_010081: LOC117466124
subclass of: SO_0000673
so part of: LOC117466124
location: complement(1073360..1073451)
location: region:1073360-1073451:-1
so has part: feature:1073360-1073451:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1073360-1073451:-1:exon

LOC117466125
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466125
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1074517..1074608)
location: region:1074517-1074608:-1
so has part: feature:1074517-1074608:-1:exon
subclass of: SO_0000578

117466125
type: Gene
SIO_000068: ncbigene

position:1074517:-1
position: 1074517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074608:-1
position: 1074608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1074517-1074608:-1:exon

LOC117466125
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466125
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554246.1
SIO_010081: LOC117466125
subclass of: SO_0000673
so part of: LOC117466125
location: complement(1074517..1074608)
location: region:1074517-1074608:-1
so has part: feature:1074517-1074608:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1074517-1074608:-1:exon

LOC117466126
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466126
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1074963..1075054)
location: region:1074963-1075054:-1
so has part: feature:1074963-1075054:-1:exon
subclass of: SO_0000578

117466126
type: Gene
SIO_000068: ncbigene

position:1074963:-1
position: 1074963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075054:-1
position: 1075054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1074963-1075054:-1:exon

LOC117466126
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466126
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554247.1
SIO_010081: LOC117466126
subclass of: SO_0000673
so part of: LOC117466126
location: complement(1074963..1075054)
location: region:1074963-1075054:-1
so has part: feature:1074963-1075054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1074963-1075054:-1:exon

LOC117465559
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465559
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: 60S ribosomal protein L7-like
translation: MADSVKQVQAVPESLLKRRKAFATMKAIRIKKMLSEKKARKVTRTLIYKRAEKYHKEYKTMYRREVRLGRTARKVGNFYVPAEPKLAFVMRIRGINGVAPKVRKVLQLMRLRQIFNGVFVRLNKASINMLRIAEPYISWGYPNLKSVRELIYKRGHGRMRKQRIALTDNALVEKALGKYGIICVEDLIHXDYTVGKNFKPANNFLWPFKLSSPRGGMNKKTTHFVEGGDAGNREDQINRMIRRMN
SIO_010081: LOC117465559
subclass of: SO_0000673
so part of: LOC117465559
location: complement(join(1075101..1075309,1075887..1075996,1076618..1076755,1077210..1077376,1078525..1078624,1079109..1079122))
location: region:1075101-1079122:-1
so has part: feature:1079109-1079122:-1:exon
so has part: feature:1078525-1078624:-1:exon
so has part: feature:1077210-1077376:-1:exon
so has part: feature:1076618-1076755:-1:exon
so has part: feature:1075887-1075996:-1:exon
so has part: feature:1075101-1075309:-1:exon

XP_033964330.1
type: Protein
SIO_000068: ncbiprotein

position:1075101:-1
position: 1075101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079122:-1
position: 1079122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1079109-1079122:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1078525-1078624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077210-1077376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1076618-1076755:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1075887-1075996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1075101-1075309:-1:exon

LOC117466130
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466130
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1075672..1075760)
location: region:1075672-1075760:-1
so has part: feature:1075672-1075760:-1:exon
subclass of: SO_0000578

117466130
type: Gene
SIO_000068: ncbigene

position:1075672:-1
position: 1075672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075760:-1
position: 1075760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075672-1075760:-1:exon

LOC117466130
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466130
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554251.1
SIO_010081: LOC117466130
subclass of: SO_0000673
so part of: LOC117466130
location: complement(1075672..1075760)
location: region:1075672-1075760:-1
so has part: feature:1075672-1075760:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1075672-1075760:-1:exon

LOC117466123
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466123
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1076476..1076567)
location: region:1076476-1076567:-1
so has part: feature:1076476-1076567:-1:exon
subclass of: SO_0000578

117466123
type: Gene
SIO_000068: ncbigene

position:1076476:-1
position: 1076476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076567:-1
position: 1076567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076476-1076567:-1:exon

LOC117466123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466123
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554244.1
SIO_010081: LOC117466123
subclass of: SO_0000673
so part of: LOC117466123
location: complement(1076476..1076567)
location: region:1076476-1076567:-1
so has part: feature:1076476-1076567:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1076476-1076567:-1:exon

LOC117466136
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466136
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1076818..1076907)
location: region:1076818-1076907:-1
so has part: feature:1076818-1076907:-1:exon
subclass of: SO_0000578

117466136
type: Gene
SIO_000068: ncbigene

position:1076818:-1
position: 1076818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076907:-1
position: 1076907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076818-1076907:-1:exon

LOC117466136
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466136
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554257.1
SIO_010081: LOC117466136
subclass of: SO_0000673
so part of: LOC117466136
location: complement(1076818..1076907)
location: region:1076818-1076907:-1
so has part: feature:1076818-1076907:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1076818-1076907:-1:exon

LOC117466133
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466133
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1077465..1077554)
location: region:1077465-1077554:-1
so has part: feature:1077465-1077554:-1:exon
subclass of: SO_0000578

117466133
type: Gene
SIO_000068: ncbigene

position:1077465:-1
position: 1077465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077554:-1
position: 1077554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077465-1077554:-1:exon

LOC117466133
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466133
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554254.1
SIO_010081: LOC117466133
subclass of: SO_0000673
so part of: LOC117466133
location: complement(1077465..1077554)
location: region:1077465-1077554:-1
so has part: feature:1077465-1077554:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1077465-1077554:-1:exon

LOC117465561
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1081078..1082761)
location: region:1081078-1082761:-1
so has part: feature:1081078-1082761:-1:exon
subclass of: SO_0000011

117465561
type: Gene
SIO_000068: ncbigene

position:1081078:-1
position: 1081078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1082761:-1
position: 1082761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1081078-1082761:-1:exon

LOC117465561
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117465561
product: uncharacterized LOC117465561
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004554195.1
SIO_010081: LOC117465561
subclass of: SO_0000673
so part of: LOC117465561
location: complement(join(1081078..1081115,1081856..1081901,1082713..1082761))
location: region:1081078-1082761:-1
so has part: feature:1082713-1082761:-1:exon
so has part: feature:1081856-1081901:-1:exon
so has part: feature:1081078-1081115:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1082713-1082761:-1:exon

position:1082713:-1
position: 1082713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1081856-1081901:-1:exon

position:1081856:-1
position: 1081856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081901:-1
position: 1081901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1081078-1081115:-1:exon

position:1081115:-1
position: 1081115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117465560
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1083838..1089870)
location: region:1083838-1089870:-1
so has part: feature:1083838-1089870:-1:exon
subclass of: SO_0000010

117465560
type: Gene
SIO_000068: ncbigene

position:1083838:-1
position: 1083838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089870:-1
position: 1089870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1083838-1089870:-1:exon

LOC117465560
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465560
product: 60S ribosomal protein L7-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_034108440.1
SIO_010081: LOC117465560
subclass of: SO_0000673
so part of: LOC117465560
location: complement(join(1083838..1083887,1084272..1084296,1085409..1085433,1085839..1086054,1086631..1086740,1087361..1087498,1087957..1088123,1089274..1089374,1089857..1089870))
location: region:1083838-1089870:-1
so has part: feature:1089857-1089870:-1:exon
so has part: feature:1089274-1089374:-1:exon
so has part: feature:1087957-1088123:-1:exon
so has part: feature:1087361-1087498:-1:exon
so has part: feature:1086631-1086740:-1:exon
so has part: feature:1085839-1086054:-1:exon
so has part: feature:1085409-1085433:-1:exon
so has part: feature:1084272-1084296:-1:exon
so has part: feature:1083838-1083887:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1089857-1089870:-1:exon

position:1089857:-1
position: 1089857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1089274-1089374:-1:exon

position:1089274:-1
position: 1089274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089374:-1
position: 1089374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1087957-1088123:-1:exon

position:1087957:-1
position: 1087957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088123:-1
position: 1088123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1087361-1087498:-1:exon

position:1087361:-1
position: 1087361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087498:-1
position: 1087498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1086631-1086740:-1:exon

position:1086631:-1
position: 1086631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086740:-1
position: 1086740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1085839-1086054:-1:exon

position:1085839:-1
position: 1085839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086054:-1
position: 1086054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1085409-1085433:-1:exon

position:1085409:-1
position: 1085409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085433:-1
position: 1085433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1084272-1084296:-1:exon

position:1084272:-1
position: 1084272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084296:-1
position: 1084296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1083838-1083887:-1:exon

position:1083887:-1
position: 1083887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117466127
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466127
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1084126..1084217)
location: region:1084126-1084217:-1
so has part: feature:1084126-1084217:-1:exon
subclass of: SO_0000578

117466127
type: Gene
SIO_000068: ncbigene

position:1084126:-1
position: 1084126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084217:-1
position: 1084217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1084126-1084217:-1:exon

LOC117466127
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466127
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554248.1
SIO_010081: LOC117466127
subclass of: SO_0000673
so part of: LOC117466127
location: complement(1084126..1084217)
location: region:1084126-1084217:-1
so has part: feature:1084126-1084217:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1084126-1084217:-1:exon

LOC117466128
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466128
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1085263..1085354)
location: region:1085263-1085354:-1
so has part: feature:1085263-1085354:-1:exon
subclass of: SO_0000578

117466128
type: Gene
SIO_000068: ncbigene

position:1085263:-1
position: 1085263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085354:-1
position: 1085354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1085263-1085354:-1:exon

LOC117466128
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466128
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554249.1
SIO_010081: LOC117466128
subclass of: SO_0000673
so part of: LOC117466128
location: complement(1085263..1085354)
location: region:1085263-1085354:-1
so has part: feature:1085263-1085354:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1085263-1085354:-1:exon

LOC117466129
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466129
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1085708..1085799)
location: region:1085708-1085799:-1
so has part: feature:1085708-1085799:-1:exon
subclass of: SO_0000578

117466129
type: Gene
SIO_000068: ncbigene

position:1085708:-1
position: 1085708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085799:-1
position: 1085799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1085708-1085799:-1:exon

LOC117466129
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466129
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554250.1
SIO_010081: LOC117466129
subclass of: SO_0000673
so part of: LOC117466129
location: complement(1085708..1085799)
location: region:1085708-1085799:-1
so has part: feature:1085708-1085799:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1085708-1085799:-1:exon

LOC117465560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465560
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: 60S ribosomal protein L7-like
translation: MADSVKQVQAVPESLLKRRKAFATMKAIRIKKMLSEKKARKVTRTLIYKRAEKYHKEYKTMYRREVRLGRTARKVGNFYVPAEPKLAFVMRIRGINGVAPKVRKVLQLMRLRQIFNGVFVRLNKASINMLRIAEPYISWGYPNLKSVRELIYKRGHGRMRKQRIALTDNALVEKALGKYGIICVEDLIHEIYTVGKNFKPANNFLWPFKLSSPRGGMNKKTTHFVEGGDAGNREDQINRMIRRMN
SIO_010081: LOC117465560
subclass of: SO_0000673
so part of: LOC117465560
location: complement(join(1085846..1086054,1086631..1086740,1087361..1087498,1087957..1088123,1089274..1089374,1089857..1089870))
location: region:1085846-1089870:-1
so has part: feature:1089857-1089870:-1:exon
so has part: feature:1089274-1089374:-1:exon
so has part: feature:1087957-1088123:-1:exon
so has part: feature:1087361-1087498:-1:exon
so has part: feature:1086631-1086740:-1:exon
so has part: feature:1085846-1086054:-1:exon

XP_033964331.1
type: Protein
SIO_000068: ncbiprotein

position:1085846:-1
position: 1085846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089857-1089870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1089274-1089374:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1087957-1088123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087361-1087498:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086631-1086740:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1085846-1086054:-1:exon

LOC117466132
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466132
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1086420..1086508)
location: region:1086420-1086508:-1
so has part: feature:1086420-1086508:-1:exon
subclass of: SO_0000578

117466132
type: Gene
SIO_000068: ncbigene

position:1086420:-1
position: 1086420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086508:-1
position: 1086508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1086420-1086508:-1:exon

LOC117466132
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466132
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554253.1
SIO_010081: LOC117466132
subclass of: SO_0000673
so part of: LOC117466132
location: complement(1086420..1086508)
location: region:1086420-1086508:-1
so has part: feature:1086420-1086508:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1086420-1086508:-1:exon

LOC117466122
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466122
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1087220..1087310)
location: region:1087220-1087310:-1
so has part: feature:1087220-1087310:-1:exon
subclass of: SO_0000578

117466122
type: Gene
SIO_000068: ncbigene

position:1087220:-1
position: 1087220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087310:-1
position: 1087310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1087220-1087310:-1:exon

LOC117466122
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466122
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554243.1
SIO_010081: LOC117466122
subclass of: SO_0000673
so part of: LOC117466122
location: complement(1087220..1087310)
location: region:1087220-1087310:-1
so has part: feature:1087220-1087310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1087220-1087310:-1:exon

LOC117466135
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466135
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1087563..1087652)
location: region:1087563-1087652:-1
so has part: feature:1087563-1087652:-1:exon
subclass of: SO_0000578

117466135
type: Gene
SIO_000068: ncbigene

position:1087563:-1
position: 1087563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087652:-1
position: 1087652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1087563-1087652:-1:exon

LOC117466135
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466135
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554256.1
SIO_010081: LOC117466135
subclass of: SO_0000673
so part of: LOC117466135
location: complement(1087563..1087652)
location: region:1087563-1087652:-1
so has part: feature:1087563-1087652:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1087563-1087652:-1:exon

LOC117466134
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466134
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1088213..1088302)
location: region:1088213-1088302:-1
so has part: feature:1088213-1088302:-1:exon
subclass of: SO_0000578

117466134
type: Gene
SIO_000068: ncbigene

position:1088213:-1
position: 1088213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088302:-1
position: 1088302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1088213-1088302:-1:exon

LOC117466134
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: snoRNA
gene: LOC117466134
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004554255.1
SIO_010081: LOC117466134
subclass of: SO_0000673
so part of: LOC117466134
location: complement(1088213..1088302)
location: region:1088213-1088302:-1
so has part: feature:1088213-1088302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1088213-1088302:-1:exon

rdh10a
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: rdh10a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1102092..1114295
location: region:1102092-1114295:1
so has part: feature:1102092-1114295:1:exon
subclass of: SO_0000010

117465670
type: Gene
SIO_000068: ncbigene

position:1102092:1
position: 1102092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114295:1
position: 1114295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102092-1114295:1:exon

rdh10a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: rdh10a
product: retinol dehydrogenase 10a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_034108631.1
SIO_010081: rdh10a
subclass of: SO_0000673
so part of: rdh10a
location: join(1102092..1102615,1103104..1103339,1109004..1109102,1109952..1110097,1112051..1112182,1113038..1114295)
location: region:1102092-1114295:1
so has part: feature:1102092-1102615:1:exon
so has part: feature:1103104-1103339:1:exon
so has part: feature:1109004-1109102:1:exon
so has part: feature:1109952-1110097:1:exon
so has part: feature:1112051-1112182:1:exon
so has part: feature:1113038-1114295:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1102092-1102615:1:exon

position:1102615:1
position: 1102615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1103104-1103339:1:exon

position:1103104:1
position: 1103104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103339:1
position: 1103339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1109004-1109102:1:exon

position:1109004:1
position: 1109004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109102:1
position: 1109102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1109952-1110097:1:exon

position:1109952:1
position: 1109952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110097:1
position: 1110097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1112051-1112182:1:exon

position:1112051:1
position: 1112051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112182:1
position: 1112182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1113038-1114295:1:exon

position:1113038:1
position: 1113038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rdh10a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: rdh10a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 10-A
translation: MMILLAEFFVVILKVLWAFVTAGCKWVVRPKEKSVAGQVCVITGAGSGLGRLFAKEFARRRAILVLWDINSQSNEETAEMVRQIYHELDNPTAKDGPVGGVEEVPPFQPQVYTYVCDVGKREHVYATADKVRRDVGNVDILINNAGVVSGHHLLECPDELIERTMVVNCHAHFWTTKAFLPKMLELNHGHIVTVASSLGLFSTAGVEDYCASKFGAIGFHESLSHEIKASEKEGINMTLVCPYLVDTGMFKGCRIRKEFEPFLPPLKPEFCVKQSMRAILTDQPMICTPRIVYMVNFMKSILPFEAIVCMYRFLGADKCMYPFLAQRKEAMNNNEAKNGI
SIO_010081: rdh10a
subclass of: SO_0000673
so part of: rdh10a
location: join(1102330..1102615,1103104..1103339,1109004..1109102,1109952..1110097,1112051..1112182,1113038..1113161)
location: region:1102330-1113161:1
so has part: feature:1102330-1102615:1:exon
so has part: feature:1103104-1103339:1:exon
so has part: feature:1109004-1109102:1:exon
so has part: feature:1109952-1110097:1:exon
so has part: feature:1112051-1112182:1:exon
so has part: feature:1113038-1113161:1:exon

XP_033964522.1
type: Protein
SIO_000068: ncbiprotein

position:1102330:1
position: 1102330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1113161:1
position: 1113161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102330-1102615:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1103104-1103339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1109004-1109102:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1109952-1110097:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1112051-1112182:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1113038-1113161:1:exon

flj11011l
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: flj11011l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1194267..1205654)
location: region:1194267-1205654:-1
so has part: feature:1194267-1205654:-1:exon
subclass of: SO_0000010

117465717
type: Gene
SIO_000068: ncbigene

position:1194267:-1
position: 1194267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205654:-1
position: 1205654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194267-1205654:-1:exon

flj11011l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: flj11011l
product: probable ubiquitin-conjugating enzyme E2 W-B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_034108702.1
SIO_010081: flj11011l
subclass of: SO_0000673
so part of: flj11011l
location: complement(join(1194267..1196017,1196101..1196176,1196261..1196416,1200008..1200110,1204634..1204725,1205575..1205654))
location: region:1194267-1205654:-1
so has part: feature:1205575-1205654:-1:exon
so has part: feature:1204634-1204725:-1:exon
so has part: feature:1200008-1200110:-1:exon
so has part: feature:1196261-1196416:-1:exon
so has part: feature:1196101-1196176:-1:exon
so has part: feature:1194267-1196017:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1205575-1205654:-1:exon

position:1205575:-1
position: 1205575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1204634-1204725:-1:exon

position:1204634:-1
position: 1204634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204725:-1
position: 1204725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1200008-1200110:-1:exon

position:1200008:-1
position: 1200008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200110:-1
position: 1200110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1196261-1196416:-1:exon

position:1196261:-1
position: 1196261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196416:-1
position: 1196416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1196101-1196176:-1:exon

position:1196101:-1
position: 1196101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196176:-1
position: 1196176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1194267-1196017:-1:exon

position:1196017:-1
position: 1196017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

flj11011l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: flj11011l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ubiquitin-conjugating enzyme E2 W-B
translation: MASMQKRLQKELLAMQNDPPPGMTLNEKSVQNTITQWIVDMEGASGTLYEGERFQLLFKFSGRYPFDSPQVMFTGENVPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRPPDNSFYVRTCNKNPKKTKWWYHDDTC
SIO_010081: flj11011l
subclass of: SO_0000673
so part of: flj11011l
location: complement(join(1196004..1196017,1196101..1196176,1196261..1196416,1200008..1200110,1204634..1204725,1205575..1205589))
location: region:1196004-1205589:-1
so has part: feature:1205575-1205589:-1:exon
so has part: feature:1204634-1204725:-1:exon
so has part: feature:1200008-1200110:-1:exon
so has part: feature:1196261-1196416:-1:exon
so has part: feature:1196101-1196176:-1:exon
so has part: feature:1196004-1196017:-1:exon

XP_033964593.1
type: Protein
SIO_000068: ncbiprotein

position:1196004:-1
position: 1196004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205589:-1
position: 1205589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1205575-1205589:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1204634-1204725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1200008-1200110:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1196261-1196416:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1196101-1196176:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1196004-1196017:-1:exon

eloca
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: eloca
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1211214..1215104)
location: region:1211214-1215104:-1
so has part: feature:1211214-1215104:-1:exon
subclass of: SO_0000010

117466117
type: Gene
SIO_000068: ncbigene

position:1211214:-1
position: 1211214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215104:-1
position: 1215104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1211214-1215104:-1:exon

eloca
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: eloca
product: elongin C paralog a, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_034109269.1
SIO_010081: eloca
subclass of: SO_0000673
so part of: eloca
location: complement(join(1211214..1211618,1213704..1213847,1214510..1214537,1214999..1215104))
location: region:1211214-1215104:-1
so has part: feature:1214999-1215104:-1:exon
so has part: feature:1214510-1214537:-1:exon
so has part: feature:1213704-1213847:-1:exon
so has part: feature:1211214-1211618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1214999-1215104:-1:exon

position:1214999:-1
position: 1214999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1214510-1214537:-1:exon

position:1214510:-1
position: 1214510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214537:-1
position: 1214537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1213704-1213847:-1:exon

position:1213704:-1
position: 1213704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213847:-1
position: 1213847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1211214-1211618:-1:exon

position:1211618:-1
position: 1211618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

eloca
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: eloca
product: elongin C paralog a, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_034109270.1
SIO_010081: eloca
subclass of: SO_0000673
so part of: eloca
location: complement(join(1211214..1211618,1213704..1213847,1214510..1214537,1214650..1214729,1214999..1215090))
location: region:1211214-1215090:-1
so has part: feature:1214999-1215090:-1:exon
so has part: feature:1214650-1214729:-1:exon
so has part: feature:1214510-1214537:-1:exon
so has part: feature:1213704-1213847:-1:exon
so has part: feature:1211214-1211618:-1:exon

position:1215090:-1
position: 1215090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1214999-1215090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1214650-1214729:-1:exon

position:1214650:-1
position: 1214650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214729:-1
position: 1214729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1214510-1214537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1213704-1213847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1211214-1211618:-1:exon

eloca
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: eloca
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongin C paralog a
translation: MDGEERTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC
SIO_010081: eloca
subclass of: SO_0000673
so part of: eloca
location: complement(join(1211428..1211618,1213704..1213847,1214510..1214513))
location: region:1211428-1214513:-1
so has part: feature:1214510-1214513:-1:exon
so has part: feature:1213704-1213847:-1:exon
so has part: feature:1211428-1211618:-1:exon

XP_033965160.1
type: Protein
SIO_000068: ncbiprotein

position:1211428:-1
position: 1211428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214513:-1
position: 1214513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1214510-1214513:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1213704-1213847:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1211428-1211618:-1:exon

eloca
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: eloca
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongin C paralog a
translation: MDGEERTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC
SIO_010081: eloca
subclass of: SO_0000673
so part of: eloca
location: complement(join(1211428..1211618,1213704..1213847,1214510..1214513))
location: region:1211428-1214513:-1
so has part: feature:1214510-1214513:-1:exon
so has part: feature:1213704-1213847:-1:exon
so has part: feature:1211428-1211618:-1:exon

XP_033965161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1214510-1214513:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1213704-1213847:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1211428-1211618:-1:exon

LOC117466013
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1226990..1244411)
location: region:1226990-1244411:-1
so has part: feature:1226990-1244411:-1:exon
subclass of: SO_0000010

117466013
type: Gene
SIO_000068: ncbigene

position:1226990:-1
position: 1226990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244411:-1
position: 1244411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1226990-1244411:-1:exon

LOC117466013
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117466013
product: junctophilin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034109141.1
SIO_010081: LOC117466013
subclass of: SO_0000673
so part of: LOC117466013
location: complement(join(1226990..1228975,1230582..1230678,1232084..1232754,1237785..1237840,1240201..1240966,1243791..1244411))
location: region:1226990-1244411:-1
so has part: feature:1243791-1244411:-1:exon
so has part: feature:1240201-1240966:-1:exon
so has part: feature:1237785-1237840:-1:exon
so has part: feature:1232084-1232754:-1:exon
so has part: feature:1230582-1230678:-1:exon
so has part: feature:1226990-1228975:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1243791-1244411:-1:exon

position:1243791:-1
position: 1243791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1240201-1240966:-1:exon

position:1240201:-1
position: 1240201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240966:-1
position: 1240966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1237785-1237840:-1:exon

position:1237785:-1
position: 1237785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1237840:-1
position: 1237840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1232084-1232754:-1:exon

position:1232084:-1
position: 1232084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232754:-1
position: 1232754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1230582-1230678:-1:exon

position:1230582:-1
position: 1230582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230678:-1
position: 1230678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1226990-1228975:-1:exon

position:1228975:-1
position: 1228975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117466013
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117466013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: junctophilin-1-like
translation: MTGGRFDFDDGGTYCGGWEDGKAHGHGICTGPKGQGEYAGSWSHGFEIVGVYTWPSGNTYRGYWSQGKRHGLGVENKGKWMYRGEWSHGFKGRYGIRQSHNTPARFDGTWSNGLQDGYGIETYGDGGTYQGQWMGGMRHGYGVRQSVPYGMATVIRSPLRTSLASLRSEQSNGNVLQDLSSPGDAPAGSRGGFVLNFHSDSEVVTKKKGLFRRGSLFGSLRQLRKSDSRTSISSKRSSARSDAAMSRISSSDANSTISIGDGELPDEDLPLEDHVDATTTETYMGEWKNDKRNGFGVSERSNGMKYEGEWLNNKRHGYGCTVFPDATKEEGKYKNNVLVRGIRKQLIPLKNPKTKEKVDRAVEAAQRAAAIARSKVEIAASSIPVELILVLIMSLVVCMLRPDYIKQPQKEPVEIKEVPVEKTEKPNKDSPQFYRKGTTPPRSPVANAVVTPPPSPHSSKKKKDQLPNSSSSRKTSKEEKPSRKTSKEEKTKSGRKLSKEERVPVAEAPPKPAKSLPPPASVYPPPSVPVNGEVHSEYHSYYVKAPTRVRPPPDPEEDREEEPTILDLARMPPQPPKSYSITPKPSLRENKSDPKLRKQDSLKPKSLADAKKASMDIADSMEETGPNSVLVAMVMLLNIGLAIIFVHFLT
SIO_010081: LOC117466013
subclass of: SO_0000673
so part of: LOC117466013
location: complement(join(1230598..1230678,1232084..1232754,1237785..1237840,1240201..1240966,1243791..1244169))
location: region:1230598-1244169:-1
so has part: feature:1243791-1244169:-1:exon
so has part: feature:1240201-1240966:-1:exon
so has part: feature:1237785-1237840:-1:exon
so has part: feature:1232084-1232754:-1:exon
so has part: feature:1230598-1230678:-1:exon

XP_033965032.1
type: Protein
SIO_000068: ncbiprotein

position:1230598:-1
position: 1230598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244169:-1
position: 1244169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1243791-1244169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1240201-1240966:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1237785-1237840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232084-1232754:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1230598-1230678:-1:exon

gdap1
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: gdap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1238893..1256380
location: region:1238893-1256380:1
so has part: feature:1238893-1256380:1:exon
subclass of: SO_0000010

117465653
type: Gene
SIO_000068: ncbigene

position:1238893:1
position: 1238893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1256380:1
position: 1256380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1238893-1256380:1:exon

gdap1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: gdap1
product: ganglioside induced differentiation associated protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034108602.1
SIO_010081: gdap1
subclass of: SO_0000673
so part of: gdap1
location: join(1238893..1239001,1246174..1246262,1246685..1246848,1247864..1248056,1252077..1252250,1253817..1253911,1254072..1254186,1255057..1256380)
location: region:1238893-1256380:1
so has part: feature:1238893-1239001:1:exon
so has part: feature:1246174-1246262:1:exon
so has part: feature:1246685-1246848:1:exon
so has part: feature:1247864-1248056:1:exon
so has part: feature:1252077-1252250:1:exon
so has part: feature:1253817-1253911:1:exon
so has part: feature:1254072-1254186:1:exon
so has part: feature:1255057-1256380:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1238893-1239001:1:exon

position:1239001:1
position: 1239001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1246174-1246262:1:exon

position:1246174:1
position: 1246174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246262:1
position: 1246262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1246685-1246848:1:exon

position:1246685:1
position: 1246685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246848:1
position: 1246848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1247864-1248056:1:exon

position:1247864:1
position: 1247864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248056:1
position: 1248056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1252077-1252250:1:exon

position:1252077:1
position: 1252077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252250:1
position: 1252250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1253817-1253911:1:exon

position:1253817:1
position: 1253817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1253911:1
position: 1253911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1254072-1254186:1:exon

position:1254072:1
position: 1254072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254186:1
position: 1254186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1255057-1256380:1:exon

position:1255057:1
position: 1255057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gdap1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: gdap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ganglioside-induced differentiation-associated protein 1 isoform X1
translation: MYFKAGAEKMASETTPGTQDGTASLIKKLPEQDGHRECSSVAEQRGNQLTLYHWTQSFNSQKVRLAIAEKGLRCEEYDVSLPLSEHNEPWFMHLNPTGEVPVLLHEEQILCDPVHIMDYLELTFTEEGTPRLIPEEGSAYFIRVQHYRELLDSLQMDAYTHGCLLHPEITVDSHIPAYAATCIRTQIGNTQSELKKLAEQHPDLKDAYVAKQRRLKSKLFDHDNMKHLKKLLDELEGVMDQVETELQRRGEETPEEGGPSWLCGDFFSMADVSLAVTLHRLKFLGLSQRFWGEGTRVNLETYYERVVQRPAFRRVLGHVNNILISAVLPVAFKVARKNAPMILGTTMLIGVLGGAAYLAFLCMKRRLTVSF
SIO_010081: gdap1
subclass of: SO_0000673
so part of: gdap1
location: join(1246241..1246262,1246685..1246848,1247864..1248056,1252077..1252250,1253817..1253911,1254072..1254186,1255057..1255409)
location: region:1246241-1255409:1
so has part: feature:1246241-1246262:1:exon
so has part: feature:1246685-1246848:1:exon
so has part: feature:1247864-1248056:1:exon
so has part: feature:1252077-1252250:1:exon
so has part: feature:1253817-1253911:1:exon
so has part: feature:1254072-1254186:1:exon
so has part: feature:1255057-1255409:1:exon

XP_033964493.1
type: Protein
SIO_000068: ncbiprotein

position:1246241:1
position: 1246241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1255409:1
position: 1255409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1246241-1246262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1246685-1246848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1247864-1248056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1252077-1252250:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1253817-1253911:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1254072-1254186:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1255057-1255409:1:exon

gdap1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: gdap1
product: ganglioside induced differentiation associated protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034108603.1
SIO_010081: gdap1
subclass of: SO_0000673
so part of: gdap1
location: join(1246437..1246848,1247864..1248056,1252077..1252250,1253817..1253911,1254072..1254186,1255057..1256380)
location: region:1246437-1256380:1
so has part: feature:1246437-1246848:1:exon
so has part: feature:1247864-1248056:1:exon
so has part: feature:1252077-1252250:1:exon
so has part: feature:1253817-1253911:1:exon
so has part: feature:1254072-1254186:1:exon
so has part: feature:1255057-1256380:1:exon

position:1246437:1
position: 1246437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1246437-1246848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1247864-1248056:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1252077-1252250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1253817-1253911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1254072-1254186:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1255057-1256380:1:exon

gdap1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: gdap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ganglioside-induced differentiation-associated protein 1 isoform X2
translation: MASETTPGTQDGTASLIKKLPEQDGHRECSSVAEQRGNQLTLYHWTQSFNSQKVRLAIAEKGLRCEEYDVSLPLSEHNEPWFMHLNPTGEVPVLLHEEQILCDPVHIMDYLELTFTEEGTPRLIPEEGSAYFIRVQHYRELLDSLQMDAYTHGCLLHPEITVDSHIPAYAATCIRTQIGNTQSELKKLAEQHPDLKDAYVAKQRRLKSKLFDHDNMKHLKKLLDELEGVMDQVETELQRRGEETPEEGGPSWLCGDFFSMADVSLAVTLHRLKFLGLSQRFWGEGTRVNLETYYERVVQRPAFRRVLGHVNNILISAVLPVAFKVARKNAPMILGTTMLIGVLGGAAYLAFLCMKRRLTVSF
SIO_010081: gdap1
subclass of: SO_0000673
so part of: gdap1
location: join(1246690..1246848,1247864..1248056,1252077..1252250,1253817..1253911,1254072..1254186,1255057..1255409)
location: region:1246690-1255409:1
so has part: feature:1246690-1246848:1:exon
so has part: feature:1247864-1248056:1:exon
so has part: feature:1252077-1252250:1:exon
so has part: feature:1253817-1253911:1:exon
so has part: feature:1254072-1254186:1:exon
so has part: feature:1255057-1255409:1:exon

XP_033964494.1
type: Protein
SIO_000068: ncbiprotein

position:1246690:1
position: 1246690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1246690-1246848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1247864-1248056:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1252077-1252250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1253817-1253911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1254072-1254186:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1255057-1255409:1:exon

pi15a
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: pi15a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1312002..1317829
location: region:1312002-1317829:1
so has part: feature:1312002-1317829:1:exon
subclass of: SO_0000010

117465990
type: Gene
SIO_000068: ncbigene

position:1312002:1
position: 1312002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1317829:1
position: 1317829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1312002-1317829:1:exon

pi15a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: pi15a
product: peptidase inhibitor 15a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034109118.1
SIO_010081: pi15a
subclass of: SO_0000673
so part of: pi15a
location: join(1312002..1312091,1312199..1312512,1313716..1313834,1315079..1315211,1315739..1315854,1317694..1317829)
location: region:1312002-1317829:1
so has part: feature:1312002-1312091:1:exon
so has part: feature:1312199-1312512:1:exon
so has part: feature:1313716-1313834:1:exon
so has part: feature:1315079-1315211:1:exon
so has part: feature:1315739-1315854:1:exon
so has part: feature:1317694-1317829:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1312002-1312091:1:exon

position:1312091:1
position: 1312091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1312199-1312512:1:exon

position:1312199:1
position: 1312199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1312512:1
position: 1312512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1313716-1313834:1:exon

position:1313716:1
position: 1313716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1313834:1
position: 1313834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1315079-1315211:1:exon

position:1315079:1
position: 1315079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1315211:1
position: 1315211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1315739-1315854:1:exon

position:1315739:1
position: 1315739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1315854:1
position: 1315854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1317694-1317829:1:exon

position:1317694:1
position: 1317694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pi15a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: pi15a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidase inhibitor 15-A
translation: MQSQLFAVDFILLCMSYGASALSSTIPAASGSLPGNNFTSAAQSSGTDSSSFSRSRRRRFISQNDMLAILDYHNKVRGKVFPPAANMEYMVWDDTLAKTSEDWAHACLWEHGPSHLLRFLGQNLSVRTGRYRSILQLVKPWYDEVKDYSFPYPRDCNPRCPLRCYGPMCTHYTQMVWATSNKVGCAIHTCHNMNVWGSVWKRATYLVCNYSPKGNWIGEAPYKVGVPCSACPPSYGGSCSNNMCFPALKTNYLHWFK
SIO_010081: pi15a
subclass of: SO_0000673
so part of: pi15a
location: join(1312243..1312512,1313716..1313834,1315079..1315211,1315739..1315854,1317694..1317829)
location: region:1312243-1317829:1
so has part: feature:1312243-1312512:1:exon
so has part: feature:1313716-1313834:1:exon
so has part: feature:1315079-1315211:1:exon
so has part: feature:1315739-1315854:1:exon
so has part: feature:1317694-1317829:1:exon

XP_033965009.1
type: Protein
SIO_000068: ncbiprotein

position:1312243:1
position: 1312243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1312243-1312512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1313716-1313834:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1315079-1315211:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1315739-1315854:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1317694-1317829:1:exon

LOC117466014
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1349474..1357576
location: region:1349474-1357576:1
so has part: feature:1349474-1357576:1:exon
subclass of: SO_0000010

117466014
type: Gene
SIO_000068: ncbigene

position:1349474:1
position: 1349474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1357576:1
position: 1357576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1349474-1357576:1:exon

LOC117466014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117466014
product: cysteine-rich secretory protein LCCL domain-containing 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034109143.1
SIO_010081: LOC117466014
subclass of: SO_0000673
so part of: LOC117466014
location: join(1349474..1349635,1350651..1350963,1357454..1357576)
location: region:1349474-1357576:1
so has part: feature:1349474-1349635:1:exon
so has part: feature:1350651-1350963:1:exon
so has part: feature:1357454-1357576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1349474-1349635:1:exon

position:1349635:1
position: 1349635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1350651-1350963:1:exon

position:1350651:1
position: 1350651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1350963:1
position: 1350963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1357454-1357576:1:exon

position:1357454:1
position: 1357454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117466014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117466014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich secretory protein LCCL domain-containing 1-like
translation: MRHVSPLRGGVSLLLLLHTASSMLMLPNSTGRAPNLDKYRDEEGDFWEAKQRGKRAITDSDAQLILDLHNKLRGQVYPPSSNMEYMSWDTELERTAEEWAETCLWEHGPASLLPQIGQNLGAHWGR
SIO_010081: LOC117466014
subclass of: SO_0000673
so part of: LOC117466014
location: join(1350706..1350963,1357454..1357576)
location: region:1350706-1357576:1
so has part: feature:1350706-1350963:1:exon
so has part: feature:1357454-1357576:1:exon

XP_033965034.1
type: Protein
SIO_000068: ncbiprotein

position:1350706:1
position: 1350706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1350706-1350963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1357454-1357576:1:exon

mtrr
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: mtrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1368406..1384496)
location: region:1368406-1384496:-1
so has part: feature:1368406-1384496:-1:exon
subclass of: SO_0000010

117465808
type: Gene
SIO_000068: ncbigene

position:1368406:-1
position: 1368406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1384496:-1
position: 1384496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1368406-1384496:-1:exon

mtrr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: mtrr
product: 5-methyltetrahydrofolate-homocysteine methyltransferase reductase
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034108843.1
SIO_010081: mtrr
subclass of: SO_0000673
so part of: mtrr
location: complement(join(1368406..1368618,1379411..1379591,1380813..1380901,1382160..1382316,1382416..1382529,1382605..1383025,1383111..1383228,1383390..1383537,1383709..1383854,1384408..1384496))
location: region:1368406-1384496:-1
so has part: feature:1384408-1384496:-1:exon
so has part: feature:1383709-1383854:-1:exon
so has part: feature:1383390-1383537:-1:exon
so has part: feature:1383111-1383228:-1:exon
so has part: feature:1382605-1383025:-1:exon
so has part: feature:1382416-1382529:-1:exon
so has part: feature:1382160-1382316:-1:exon
so has part: feature:1380813-1380901:-1:exon
so has part: feature:1379411-1379591:-1:exon
so has part: feature:1368406-1368618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1384408-1384496:-1:exon

position:1384408:-1
position: 1384408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1383709-1383854:-1:exon

position:1383709:-1
position: 1383709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383854:-1
position: 1383854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1383390-1383537:-1:exon

position:1383390:-1
position: 1383390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383537:-1
position: 1383537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1383111-1383228:-1:exon

position:1383111:-1
position: 1383111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383228:-1
position: 1383228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1382605-1383025:-1:exon

position:1382605:-1
position: 1382605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383025:-1
position: 1383025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1382416-1382529:-1:exon

position:1382416:-1
position: 1382416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382529:-1
position: 1382529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1382160-1382316:-1:exon

position:1382160:-1
position: 1382160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382316:-1
position: 1382316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1380813-1380901:-1:exon

position:1380813:-1
position: 1380813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380901:-1
position: 1380901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1379411-1379591:-1:exon

position:1379411:-1
position: 1379411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379591:-1
position: 1379591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1368406-1368618:-1:exon

position:1368618:-1
position: 1368618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mtrr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: mtrr
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: methionine synthase reductase
translation: MVVFRAVVQAFLRQPVCNLLKSALSSMPCEAKPRFVVLYGSQKGQAESIAEGIADEAEEHGLLAELSCLNQNEKYNLEKEKAPVVFIVSTTGDGEPPDNALQFVKTIKKKTPDHYKHLCYALLALGDTNYANFCNCGKTIERSLQELGAKQFYATGYADDGVGLEVVLDPWIEGLWKAINGAVSKMASDRTDYSNAETPDSSIPDVQLNLLSITDQKDCGSTGASVSKCATAASASAVSDLRPAVSPSQPLGTASVSAAVPHVTLTASLTHSLPPLSESSLNVPALPPPYLDVTLKEADTVQQIVGPSNKETLHEVPISRALQLTRGDSVKTSLLLELDLSAHPNLIYQPGDSFDMFCPNKDSEVEEMLHRVGLYEQRNHSVHISLRKDTKKKGAQVPAHVAPDMSLLYLLTWCLEIRSVPKKAFVRALVEHTEGGVQRRRLQELCSKQGSADYNLHVRDQSLCLMELLSAFPSCSPPLSLLIEHLPKLQPRPYSAAR
SIO_010081: mtrr
subclass of: SO_0000673
so part of: mtrr
location: complement(join(1368572..1368618,1379411..1379591,1380813..1380901,1382160..1382316,1382416..1382529,1382605..1383025,1383111..1383228,1383390..1383537,1383709..1383854,1384408..1384484))
location: region:1368572-1384484:-1
so has part: feature:1384408-1384484:-1:exon
so has part: feature:1383709-1383854:-1:exon
so has part: feature:1383390-1383537:-1:exon
so has part: feature:1383111-1383228:-1:exon
so has part: feature:1382605-1383025:-1:exon
so has part: feature:1382416-1382529:-1:exon
so has part: feature:1382160-1382316:-1:exon
so has part: feature:1380813-1380901:-1:exon
so has part: feature:1379411-1379591:-1:exon
so has part: feature:1368572-1368618:-1:exon

XP_033964734.1
type: Protein
SIO_000068: ncbiprotein

position:1368572:-1
position: 1368572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1384484:-1
position: 1384484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1384408-1384484:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1383709-1383854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383390-1383537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1383111-1383228:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1382605-1383025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1382416-1382529:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1382160-1382316:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1380813-1380901:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1379411-1379591:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1368572-1368618:-1:exon

cct5
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: cct5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1385291..1390071
location: region:1385291-1390071:1
so has part: feature:1385291-1390071:1:exon
subclass of: SO_0000010

117465740
type: Gene
SIO_000068: ncbigene

position:1385291:1
position: 1385291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390071:1
position: 1390071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1385291-1390071:1:exon

cct5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: cct5
product: chaperonin containing TCP1, subunit 5 (epsilon)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_034108737.1
SIO_010081: cct5
subclass of: SO_0000673
so part of: cct5
location: join(1385291..1385534,1385914..1385974,1386532..1386696,1387105..1387303,1387389..1387581,1387705..1387854,1387936..1388055,1388646..1388831,1388920..1389057,1389249..1389429,1389732..1390071)
location: region:1385291-1390071:1
so has part: feature:1385291-1385534:1:exon
so has part: feature:1385914-1385974:1:exon
so has part: feature:1386532-1386696:1:exon
so has part: feature:1387105-1387303:1:exon
so has part: feature:1387389-1387581:1:exon
so has part: feature:1387705-1387854:1:exon
so has part: feature:1387936-1388055:1:exon
so has part: feature:1388646-1388831:1:exon
so has part: feature:1388920-1389057:1:exon
so has part: feature:1389249-1389429:1:exon
so has part: feature:1389732-1390071:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1385291-1385534:1:exon

position:1385534:1
position: 1385534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1385914-1385974:1:exon

position:1385914:1
position: 1385914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385974:1
position: 1385974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1386532-1386696:1:exon

position:1386532:1
position: 1386532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386696:1
position: 1386696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1387105-1387303:1:exon

position:1387105:1
position: 1387105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387303:1
position: 1387303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1387389-1387581:1:exon

position:1387389:1
position: 1387389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387581:1
position: 1387581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1387705-1387854:1:exon

position:1387705:1
position: 1387705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387854:1
position: 1387854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1387936-1388055:1:exon

position:1387936:1
position: 1387936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1388055:1
position: 1388055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1388646-1388831:1:exon

position:1388646:1
position: 1388646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1388831:1
position: 1388831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1388920-1389057:1:exon

position:1388920:1
position: 1388920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1389057:1
position: 1389057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1389249-1389429:1:exon

position:1389249:1
position: 1389249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1389429:1
position: 1389429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1389732-1390071:1:exon

position:1389732:1
position: 1389732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cct5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: cct5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 1 subunit epsilon
translation: MSSLGTLAFDEYGRPFIIIKDQDRKTRLSGIDALKSHIMAAKAVASTLKTSLGPNGLDKMMVDRDGEVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEQAEQLLDRGIHPIRISDGYDQAAKVAIAQLDKIAETLLCDPNNTEPLIETAMTTLGSKIINRCHRQMAEIAVNAILTVADMDRKDVDFELIKMEGKVGGKLEDTQLIKGVIVDKEFSHPQMPKELKNVKMAILTCPFEPPKPKTKHKLDVTCVADYKALQKYEKEKFLEMIHQVKSNGANLAICQWGFDDEANHLLLQNDLPAIRWVGGPEIELIAIATGGRIVPRFSELTPEKLGTAGLVKEISFGTTKDRMLVIQECKNTRAVTIFIRGGNKMIIEEAKRALHDALCVIRNLVRDNRIVYGGGASDISCALAVNLAADKCPSLEQYAMRAFADAMEVIPMALAENSGYNPIQTMTEVRARQVKENNPFLGIDCLRKNTNDMKQQHVVETLIGKKQQISLATQVVKMILKIDDIRAPGEIED
SIO_010081: cct5
subclass of: SO_0000673
so part of: cct5
location: join(1385430..1385534,1385914..1385974,1386532..1386696,1387105..1387303,1387389..1387581,1387705..1387854,1387936..1388055,1388646..1388831,1388920..1389057,1389249..1389429,1389732..1389859)
location: region:1385430-1389859:1
so has part: feature:1385430-1385534:1:exon
so has part: feature:1385914-1385974:1:exon
so has part: feature:1386532-1386696:1:exon
so has part: feature:1387105-1387303:1:exon
so has part: feature:1387389-1387581:1:exon
so has part: feature:1387705-1387854:1:exon
so has part: feature:1387936-1388055:1:exon
so has part: feature:1388646-1388831:1:exon
so has part: feature:1388920-1389057:1:exon
so has part: feature:1389249-1389429:1:exon
so has part: feature:1389732-1389859:1:exon

XP_033964628.1
type: Protein
SIO_000068: ncbiprotein

position:1385430:1
position: 1385430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1389859:1
position: 1389859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1385430-1385534:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1385914-1385974:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1386532-1386696:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1387105-1387303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1387389-1387581:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1387705-1387854:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1387936-1388055:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1388646-1388831:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1388920-1389057:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1389249-1389429:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1389732-1389859:1:exon

cmbl
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: cmbl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1391217..1397918)
location: region:1391217-1397918:-1
so has part: feature:1391217-1397918:-1:exon
subclass of: SO_0000010

117465981
type: Gene
SIO_000068: ncbigene

position:1391217:-1
position: 1391217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1397918:-1
position: 1397918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1391217-1397918:-1:exon

cmbl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: cmbl
product: carboxymethylenebutenolidase homolog (Pseudomonas)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_034109106.1
SIO_010081: cmbl
subclass of: SO_0000673
so part of: cmbl
location: complement(join(1391217..1391500,1392819..1392910,1393664..1393806,1394014..1394121,1396819..1397033,1397760..1397918))
location: region:1391217-1397918:-1
so has part: feature:1397760-1397918:-1:exon
so has part: feature:1396819-1397033:-1:exon
so has part: feature:1394014-1394121:-1:exon
so has part: feature:1393664-1393806:-1:exon
so has part: feature:1392819-1392910:-1:exon
so has part: feature:1391217-1391500:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1397760-1397918:-1:exon

position:1397760:-1
position: 1397760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1396819-1397033:-1:exon

position:1396819:-1
position: 1396819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1397033:-1
position: 1397033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1394014-1394121:-1:exon

position:1394014:-1
position: 1394014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394121:-1
position: 1394121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1393664-1393806:-1:exon

position:1393664:-1
position: 1393664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1393806:-1
position: 1393806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1392819-1392910:-1:exon

position:1392819:-1
position: 1392819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1392910:-1
position: 1392910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1391217-1391500:-1:exon

position:1391500:-1
position: 1391500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cmbl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: cmbl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxymethylenebutenolidase homolog
translation: MANEARPCPCDLGDRMEYGGLGLEVQIEHIGAYLVKPSAPSDKAIIVIQDIFGWQLPNTRYMADLLADNGYIAVCPDLFVGKEPWSPSNDWSKFQEWFEEKNPTNINKEVDAVLRFLKEKCGAKHIGAVGFCWGGSSTHHLALKYPELKAGVSVYGIVREREDRYDLKFPTLFIFAENDHVIPLDQVSVLEAKLKEKCTVDHQVKIFPGQTHGFVHRKREDINPEDKAQILEARGDMLDWLNKYM
SIO_010081: cmbl
subclass of: SO_0000673
so part of: cmbl
location: complement(join(1391321..1391500,1392819..1392910,1393664..1393806,1394014..1394121,1396819..1397033))
location: region:1391321-1397033:-1
so has part: feature:1396819-1397033:-1:exon
so has part: feature:1394014-1394121:-1:exon
so has part: feature:1393664-1393806:-1:exon
so has part: feature:1392819-1392910:-1:exon
so has part: feature:1391321-1391500:-1:exon

XP_033964997.1
type: Protein
SIO_000068: ncbiprotein

position:1391321:-1
position: 1391321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1396819-1397033:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1394014-1394121:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1393664-1393806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1392819-1392910:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1391321-1391500:-1:exon

si:dkey-6e2.2
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: si:dkey-6e2.2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1410460..1414935
location: region:1410460-1414935:1
so has part: feature:1410460-1414935:1:exon
subclass of: SO_0000010

117465709
type: Gene
SIO_000068: ncbigene

position:1410460:1
position: 1410460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1414935:1
position: 1414935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1410460-1414935:1:exon

si:dkey-6e2.2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: si:dkey-6e2.2
product: uncharacterized si:dkey-6e2.2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034108685.1
SIO_010081: si:dkey-6e2.2
subclass of: SO_0000673
so part of: si:dkey-6e2.2
location: join(1410460..1410543,1412850..1414935)
location: region:1410460-1414935:1
so has part: feature:1410460-1410543:1:exon
so has part: feature:1412850-1414935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1410460-1410543:1:exon

position:1410543:1
position: 1410543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1412850-1414935:1:exon

position:1412850:1
position: 1412850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:dkey-6e2.2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: si:dkey-6e2.2
product: uncharacterized si:dkey-6e2.2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_034108684.1
SIO_010081: si:dkey-6e2.2
subclass of: SO_0000673
so part of: si:dkey-6e2.2
location: join(1411764..1411807,1412850..1414935)
location: region:1411764-1414935:1
so has part: feature:1411764-1411807:1:exon
so has part: feature:1412850-1414935:1:exon

position:1411764:1
position: 1411764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1411764-1411807:1:exon

position:1411807:1
position: 1411807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1412850-1414935:1:exon

si:dkey-6e2.2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: si:dkey-6e2.2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein si:dkey-6e2.2
translation: MPRALSDVWRHFTPANVQGRSVYMCKYCDKTYVKNATKMQQHIAKCKQIPQGPKHAADRSSTPGGNESVSAVSESDTVSSAPGPSGIRGFFDFMDEPSQRKADECLARAVYATGSPLMLPSNVYWKRFLNVLQPAYTPPTRHALSTNLLDEEFNRVQTKVKQTIDKADCISVISDGWSNIRGQGIINYIVTTPQPVFYKSVDTKDNRHTGQYIADELKVIINDLGPEKVFALVTDNAANMKVAWAHVEETYPHITTIGCAAHTLNLLLKDIMALKTMDTLYKRAKQIVKYVKGKQVASATYLSKQKEKNMSTTLKLPSITRWGGVVIMYDSLLEGKESLQEMAISQTAGMLDDVFWEGVSSSLKILKPIEAAIAMIEGDGAILSDVQCLFAELKEEIQTVLPTSLLLKAEETAVVKSLEKRREFCMKPVHAAAYMLDPKYDMGILSGEEINGAYRVITVMSDHLGLDKGKVLGSLAKYRTKQGLWEGDGIWQSCQHISAATWWKGLCGSEALAPVASIILQIPPSSAASERNWSLFGNTHTKVRNRLTNVRVEKLVGIRANLRLFEPDTEPSSTRLDSDTAEDDSECDVDEAQEEPVG
SIO_010081: si:dkey-6e2.2
subclass of: SO_0000673
so part of: si:dkey-6e2.2
location: 1412854..1414650
location: region:1412854-1414650:1
so has part: feature:1412854-1414650:1:exon

XP_033964575.1
type: Protein
SIO_000068: ncbiprotein

position:1412854:1
position: 1412854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1414650:1
position: 1414650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1412854-1414650:1:exon

si:dkey-6e2.2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: si:dkey-6e2.2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein si:dkey-6e2.2
translation: MPRALSDVWRHFTPANVQGRSVYMCKYCDKTYVKNATKMQQHIAKCKQIPQGPKHAADRSSTPGGNESVSAVSESDTVSSAPGPSGIRGFFDFMDEPSQRKADECLARAVYATGSPLMLPSNVYWKRFLNVLQPAYTPPTRHALSTNLLDEEFNRVQTKVKQTIDKADCISVISDGWSNIRGQGIINYIVTTPQPVFYKSVDTKDNRHTGQYIADELKVIINDLGPEKVFALVTDNAANMKVAWAHVEETYPHITTIGCAAHTLNLLLKDIMALKTMDTLYKRAKQIVKYVKGKQVASATYLSKQKEKNMSTTLKLPSITRWGGVVIMYDSLLEGKESLQEMAISQTAGMLDDVFWEGVSSSLKILKPIEAAIAMIEGDGAILSDVQCLFAELKEEIQTVLPTSLLLKAEETAVVKSLEKRREFCMKPVHAAAYMLDPKYDMGILSGEEINGAYRVITVMSDHLGLDKGKVLGSLAKYRTKQGLWEGDGIWQSCQHISAATWWKGLCGSEALAPVASIILQIPPSSAASERNWSLFGNTHTKVRNRLTNVRVEKLVGIRANLRLFEPDTEPSSTRLDSDTAEDDSECDVDEAQEEPVG
SIO_010081: si:dkey-6e2.2
subclass of: SO_0000673
so part of: si:dkey-6e2.2
location: 1412854..1414650
location: region:1412854-1414650:1
so has part: feature:1412854-1414650:1:exon

XP_033964576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1412854-1414650:1:exon

LOC117466015
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466015
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1418265..>1461118
location: region:1418265-1461118:1
so has part: feature:1418265-1461118:1:exon
subclass of: SO_0000010

117466015
type: Gene
SIO_000068: ncbigene

position:1418265:1
position: 1418265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1461118:1
position: 1461118
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1418265-1461118:1:exon

LOC117466015
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117466015
product: E3 ubiquitin-protein ligase MARCHF6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034109144.1
SIO_010081: LOC117466015
subclass of: SO_0000673
so part of: LOC117466015
location: join(1418265..1418603,1419686..1419785,1421471..1421544,1421690..1421833,1423410..1423482,1423561..1423732,1425039..1425228,1427320..1427381,1427464..1427496,1427577..1427628,1427774..1427832,1427919..1427999,1430170..1430238,1431429..1431503,1433181..1433315,1434340..1434560,1450893..1451030,1451475..1451700,1452715..1452784,1454379..1454560,1455977..1456111,1456673..1456762,1457664..1457796,1461105..>1461118)
location: region:1418265-1461118:1
so has part: feature:1418265-1418603:1:exon
so has part: feature:1419686-1419785:1:exon
so has part: feature:1421471-1421544:1:exon
so has part: feature:1421690-1421833:1:exon
so has part: feature:1423410-1423482:1:exon
so has part: feature:1423561-1423732:1:exon
so has part: feature:1425039-1425228:1:exon
so has part: feature:1427320-1427381:1:exon
so has part: feature:1427464-1427496:1:exon
so has part: feature:1427577-1427628:1:exon
so has part: feature:1427774-1427832:1:exon
so has part: feature:1427919-1427999:1:exon
so has part: feature:1430170-1430238:1:exon
so has part: feature:1431429-1431503:1:exon
so has part: feature:1433181-1433315:1:exon
so has part: feature:1434340-1434560:1:exon
so has part: feature:1450893-1451030:1:exon
so has part: feature:1451475-1451700:1:exon
so has part: feature:1452715-1452784:1:exon
so has part: feature:1454379-1454560:1:exon
so has part: feature:1455977-1456111:1:exon
so has part: feature:1456673-1456762:1:exon
so has part: feature:1457664-1457796:1:exon
so has part: feature:1461105-1461118:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1418265-1418603:1:exon

position:1418603:1
position: 1418603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1419686-1419785:1:exon

position:1419686:1
position: 1419686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419785:1
position: 1419785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1421471-1421544:1:exon

position:1421471:1
position: 1421471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1421544:1
position: 1421544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1421690-1421833:1:exon

position:1421690:1
position: 1421690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1421833:1
position: 1421833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1423410-1423482:1:exon

position:1423410:1
position: 1423410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1423482:1
position: 1423482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1423561-1423732:1:exon

position:1423561:1
position: 1423561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1423732:1
position: 1423732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1425039-1425228:1:exon

position:1425039:1
position: 1425039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425228:1
position: 1425228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1427320-1427381:1:exon

position:1427320:1
position: 1427320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427381:1
position: 1427381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1427464-1427496:1:exon

position:1427464:1
position: 1427464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427496:1
position: 1427496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1427577-1427628:1:exon

position:1427577:1
position: 1427577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427628:1
position: 1427628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1427774-1427832:1:exon

position:1427774:1
position: 1427774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427832:1
position: 1427832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1427919-1427999:1:exon

position:1427919:1
position: 1427919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427999:1
position: 1427999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1430170-1430238:1:exon

position:1430170:1
position: 1430170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430238:1
position: 1430238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1431429-1431503:1:exon

position:1431429:1
position: 1431429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431503:1
position: 1431503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1433181-1433315:1:exon

position:1433181:1
position: 1433181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1433315:1
position: 1433315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1434340-1434560:1:exon

position:1434340:1
position: 1434340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434560:1
position: 1434560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1450893-1451030:1:exon

position:1450893:1
position: 1450893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451030:1
position: 1451030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1451475-1451700:1:exon

position:1451475:1
position: 1451475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451700:1
position: 1451700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1452715-1452784:1:exon

position:1452715:1
position: 1452715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1452784:1
position: 1452784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1454379-1454560:1:exon

position:1454379:1
position: 1454379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1454560:1
position: 1454560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1455977-1456111:1:exon

position:1455977:1
position: 1455977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456111:1
position: 1456111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1456673-1456762:1:exon

position:1456673:1
position: 1456673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456762:1
position: 1456762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1457664-1457796:1:exon

position:1457664:1
position: 1457664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1457796:1
position: 1457796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1461105-1461118:1:exon

position:1461105:1
position: 1461105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117466015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117466015
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase MARCHF6-like
translation: MDTAEEADICRVCRSEGTPDKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYSPDMPSRLPIQDICAGLLTSVGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLFTGSVSSLLTLPLDMLSTENLLADCLQGCFVVTCTLCAFISLVWLREQIVHGGAPQWLEQHQMPPPHAAGQQANEVPAAGQGAADEPPAAQPAPADPPAQNQAEPEPPDVPPDQVEDPELEEEEGAAAEDADPNNGAQDDMNWNALEWDRAAEELTWERMLGLDGSLVFLEHVFWVVSLNTLFILVFAFCPYHIGHFSVVGLGFEEYVQASHFEGLITTIVGYILLAMTLILCHGLAALVRFQRSRRLLGVCYIVVKVSLLVVVEIGVFPLICGWWLDICSLEMFDASLKDRELSFKSAPGTTMFLHWLVGMVYVFYFASFILLLREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHLRRFILSVVVFGSIVLLMLWLPIRLIKLLMPTFLPYNVMLYSDAPVSELSLELLLLQVVLPALLEQGHTRQWLKGLVRAWTVSAGYLLDLHSYLLGEQEDNEGNQPVNNNNNNPPPAHHHHNNNNNPAPAVGEGLHAAHQAILQQGGPVGFQPYHRPLRFPFRIVLLIAFMCLTLLVASLVCLTLPVFTGRWLMSFWTGSSKIHELYTAACGLYVCWLSIRGVSVLLAWMPQGRTVIARKVQEWTLMILKTLVVALLVAGVIPLLLGLLFELVIVAPLRVPLDQTPLFYPWQDWALGVLHAKIIAAITLMGPQWWLKTVIEQVYANGIRNIDLQFIIRKLAAPVISVLLLSLCVPYVIAAGVVPAVGATPE
SIO_010081: LOC117466015
subclass of: SO_0000673
so part of: LOC117466015
location: join(1418585..1418603,1419686..1419785,1421471..1421544,1421690..1421833,1423410..1423482,1423561..1423732,1425039..1425228,1427320..1427381,1427464..1427496,1427577..1427628,1427774..1427832,1427919..1427999,1430170..1430238,1431429..1431503,1433181..1433315,1434340..1434560,1450893..1451030,1451475..1451700,1452715..1452784,1454379..1454560,1455977..1456111,1456673..1456762,1457664..1457796,1461105..>1461118)
location: region:1418585-1461118:1
so has part: feature:1418585-1418603:1:exon
so has part: feature:1419686-1419785:1:exon
so has part: feature:1421471-1421544:1:exon
so has part: feature:1421690-1421833:1:exon
so has part: feature:1423410-1423482:1:exon
so has part: feature:1423561-1423732:1:exon
so has part: feature:1425039-1425228:1:exon
so has part: feature:1427320-1427381:1:exon
so has part: feature:1427464-1427496:1:exon
so has part: feature:1427577-1427628:1:exon
so has part: feature:1427774-1427832:1:exon
so has part: feature:1427919-1427999:1:exon
so has part: feature:1430170-1430238:1:exon
so has part: feature:1431429-1431503:1:exon
so has part: feature:1433181-1433315:1:exon
so has part: feature:1434340-1434560:1:exon
so has part: feature:1450893-1451030:1:exon
so has part: feature:1451475-1451700:1:exon
so has part: feature:1452715-1452784:1:exon
so has part: feature:1454379-1454560:1:exon
so has part: feature:1455977-1456111:1:exon
so has part: feature:1456673-1456762:1:exon
so has part: feature:1457664-1457796:1:exon
so has part: feature:1461105-1461118:1:exon

XP_033965035.1
type: Protein
SIO_000068: ncbiprotein

position:1418585:1
position: 1418585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1418585-1418603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1419686-1419785:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1421471-1421544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1421690-1421833:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1423410-1423482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1423561-1423732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1425039-1425228:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1427320-1427381:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1427464-1427496:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1427577-1427628:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1427774-1427832:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1427919-1427999:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1430170-1430238:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1431429-1431503:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1433181-1433315:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1434340-1434560:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1450893-1451030:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1451475-1451700:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1452715-1452784:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1454379-1454560:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1455977-1456111:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1456673-1456762:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1457664-1457796:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1461105-1461118:1:exon

LOC117466016
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1461232..1463487)
location: region:1461232-1463487:-1
so has part: feature:1461232-1463487:-1:exon
subclass of: SO_0000010

117466016
type: Gene
SIO_000068: ncbigene

position:1461232:-1
position: 1461232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1463487:-1
position: 1463487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1461232-1463487:-1:exon

LOC117466016
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117466016
product: arylamine N-acetyltransferase, pineal gland isozyme NAT-10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_034109145.1
SIO_010081: LOC117466016
subclass of: SO_0000673
so part of: LOC117466016
location: complement(join(1461232..1461465,1463072..1463487))
location: region:1461232-1463487:-1
so has part: feature:1463072-1463487:-1:exon
so has part: feature:1461232-1461465:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1463072-1463487:-1:exon

position:1463072:-1
position: 1463072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1461232-1461465:-1:exon

position:1461465:-1
position: 1461465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117466016
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117466016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase, pineal gland isozyme NAT-10-like
translation: MTSVDMHVDAYLSRIGFSGSPSRSLHVLRSVHTCHLLSVPFENLTVHSGGRVQLDPPHLYEKLVLQRRGGFCYENNSLFAWLLTQMGFQVTLLSAQVNNQTTGFYGPPFDHLVVMVTLDGQRWLCDVGFGVPGFRTPLSLDTRGPQEQGHRVYRITEQRWEGTEYI
SIO_010081: LOC117466016
subclass of: SO_0000673
so part of: LOC117466016
location: complement(join(1461232..1461465,1463072..1463338))
location: region:1461232-1463338:-1
so has part: feature:1463072-1463338:-1:exon
so has part: feature:1461232-1461465:-1:exon

XP_033965036.1
type: Protein
SIO_000068: ncbiprotein

position:1463338:-1
position: 1463338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1463072-1463338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1461232-1461465:-1:exon

zdhhc20b
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: zdhhc20b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1464195..1480456
location: region:1464195-1480456:1
so has part: feature:1464195-1480456:1:exon
subclass of: SO_0000010

117465774
type: Gene
SIO_000068: ncbigene

position:1464195:1
position: 1464195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480456:1
position: 1480456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1464195-1480456:1:exon

zdhhc20b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: zdhhc20b
product: zinc finger DHHC-type palmitoyltransferase 20b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034108787.1
SIO_010081: zdhhc20b
subclass of: SO_0000673
so part of: zdhhc20b
location: join(1464195..1464320,1466821..1466847,1469315..1469409,1470206..1470326,1471548..1471617,1471714..1471746,1472004..1472124,1474848..1474883,1475022..1475154,1476606..1476732,1478852..1478944,1479269..1479381,1480054..1480101,1480181..1480456)
location: region:1464195-1480456:1
so has part: feature:1464195-1464320:1:exon
so has part: feature:1466821-1466847:1:exon
so has part: feature:1469315-1469409:1:exon
so has part: feature:1470206-1470326:1:exon
so has part: feature:1471548-1471617:1:exon
so has part: feature:1471714-1471746:1:exon
so has part: feature:1472004-1472124:1:exon
so has part: feature:1474848-1474883:1:exon
so has part: feature:1475022-1475154:1:exon
so has part: feature:1476606-1476732:1:exon
so has part: feature:1478852-1478944:1:exon
so has part: feature:1479269-1479381:1:exon
so has part: feature:1480054-1480101:1:exon
so has part: feature:1480181-1480456:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1464195-1464320:1:exon

position:1464320:1
position: 1464320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1466821-1466847:1:exon

position:1466821:1
position: 1466821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466847:1
position: 1466847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1469315-1469409:1:exon

position:1469315:1
position: 1469315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469409:1
position: 1469409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1470206-1470326:1:exon

position:1470206:1
position: 1470206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470326:1
position: 1470326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1471548-1471617:1:exon

position:1471548:1
position: 1471548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471617:1
position: 1471617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1471714-1471746:1:exon

position:1471714:1
position: 1471714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471746:1
position: 1471746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1472004-1472124:1:exon

position:1472004:1
position: 1472004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1472124:1
position: 1472124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1474848-1474883:1:exon

position:1474848:1
position: 1474848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1474883:1
position: 1474883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1475022-1475154:1:exon

position:1475022:1
position: 1475022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1475154:1
position: 1475154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1476606-1476732:1:exon

position:1476606:1
position: 1476606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1476732:1
position: 1476732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1478852-1478944:1:exon

position:1478852:1
position: 1478852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1478944:1
position: 1478944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1479269-1479381:1:exon

position:1479269:1
position: 1479269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1479381:1
position: 1479381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1480054-1480101:1:exon

position:1480054:1
position: 1480054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480101:1
position: 1480101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1480181-1480456:1:exon

position:1480181:1
position: 1480181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

zdhhc20b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: zdhhc20b
product: zinc finger DHHC-type palmitoyltransferase 20b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_034108788.1
SIO_010081: zdhhc20b
subclass of: SO_0000673
so part of: zdhhc20b
location: join(1464195..1464320,1466821..1466847,1469315..1469409,1470206..1470326,1471548..1471617,1471714..1471746,1472004..1472124,1475022..1475154,1476606..1476732,1478852..1478944,1479269..1479381,1480054..1480101,1480181..1480456)
location: region:1464195-1480456:1
so has part: feature:1464195-1464320:1:exon
so has part: feature:1466821-1466847:1:exon
so has part: feature:1469315-1469409:1:exon
so has part: feature:1470206-1470326:1:exon
so has part: feature:1471548-1471617:1:exon
so has part: feature:1471714-1471746:1:exon
so has part: feature:1472004-1472124:1:exon
so has part: feature:1475022-1475154:1:exon
so has part: feature:1476606-1476732:1:exon
so has part: feature:1478852-1478944:1:exon
so has part: feature:1479269-1479381:1:exon
so has part: feature:1480054-1480101:1:exon
so has part: feature:1480181-1480456:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1464195-1464320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1466821-1466847:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469315-1469409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1470206-1470326:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1471548-1471617:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1471714-1471746:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1472004-1472124:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1475022-1475154:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1476606-1476732:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1478852-1478944:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1479269-1479381:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1480054-1480101:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1480181-1480456:1:exon

zdhhc20b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: zdhhc20b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20 isoform X1
translation: MAPTHVLRCCQRTLAWIPVIFIAAVVCWSYYAYVVELCLYTIISIGEKIVYMIFFHLFFIMFVWSYWKTIFIQPANPSKEFCLPKVEKERYEKEERPENQQEILWRAATSLPLYTRTGVGAIRYCDRCQVIKPDRCHHCSACDMCVLKMDHHCPWVNNCVGFSNYKFFILFLAYSLLYCLFIAATVLQYFIKFWTLCRRKSVENCPKNELKDTHAKFHVLFLFFVAAMFCISILSLFSYHLWLVGKNRSTIEAFRAPVFRAGSDKNGFSLGFRKNIAQVFGDQKKFWLLPVCTSQGDGLTFPTRLVSADVEQQATVTLQQEPSKSAAEVPESPVSESQNRLLSSEQNANNVAEHQDNNTHTPAESETITISIESES
SIO_010081: zdhhc20b
subclass of: SO_0000673
so part of: zdhhc20b
location: join(1464203..1464320,1466821..1466847,1469315..1469409,1470206..1470326,1471548..1471617,1471714..1471746,1472004..1472124,1474848..1474883,1475022..1475154,1476606..1476732,1478852..1478944,1479269..1479381,1480054..1480097)
location: region:1464203-1480097:1
so has part: feature:1464203-1464320:1:exon
so has part: feature:1466821-1466847:1:exon
so has part: feature:1469315-1469409:1:exon
so has part: feature:1470206-1470326:1:exon
so has part: feature:1471548-1471617:1:exon
so has part: feature:1471714-1471746:1:exon
so has part: feature:1472004-1472124:1:exon
so has part: feature:1474848-1474883:1:exon
so has part: feature:1475022-1475154:1:exon
so has part: feature:1476606-1476732:1:exon
so has part: feature:1478852-1478944:1:exon
so has part: feature:1479269-1479381:1:exon
so has part: feature:1480054-1480097:1:exon

XP_033964678.1
type: Protein
SIO_000068: ncbiprotein

position:1464203:1
position: 1464203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480097:1
position: 1480097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1464203-1464320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1466821-1466847:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469315-1469409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1470206-1470326:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1471548-1471617:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1471714-1471746:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1472004-1472124:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1474848-1474883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1475022-1475154:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1476606-1476732:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1478852-1478944:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1479269-1479381:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1480054-1480097:1:exon

zdhhc20b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: zdhhc20b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20 isoform X2
translation: MAPTHVLRCCQRTLAWIPVIFIAAVVCWSYYAYVVELCLYTIISIGEKIVYMIFFHLFFIMFVWSYWKTIFIQPANPSKEFCLPKVEKERYEKEERPENQQEILWRAATSLPLYTRTGVGAIRYCDRCQVIKPDRCHHCSACDMCVLKMDHHCPWVNNCVGFSNYKFFILFLAYSLLYCLFIAATVLQYFIKFWTNELKDTHAKFHVLFLFFVAAMFCISILSLFSYHLWLVGKNRSTIEAFRAPVFRAGSDKNGFSLGFRKNIAQVFGDQKKFWLLPVCTSQGDGLTFPTRLVSADVEQQATVTLQQEPSKSAAEVPESPVSESQNRLLSSEQNANNVAEHQDNNTHTPAESETITISIESES
SIO_010081: zdhhc20b
subclass of: SO_0000673
so part of: zdhhc20b
location: join(1464203..1464320,1466821..1466847,1469315..1469409,1470206..1470326,1471548..1471617,1471714..1471746,1472004..1472124,1475022..1475154,1476606..1476732,1478852..1478944,1479269..1479381,1480054..1480097)
location: region:1464203-1480097:1
so has part: feature:1464203-1464320:1:exon
so has part: feature:1466821-1466847:1:exon
so has part: feature:1469315-1469409:1:exon
so has part: feature:1470206-1470326:1:exon
so has part: feature:1471548-1471617:1:exon
so has part: feature:1471714-1471746:1:exon
so has part: feature:1472004-1472124:1:exon
so has part: feature:1475022-1475154:1:exon
so has part: feature:1476606-1476732:1:exon
so has part: feature:1478852-1478944:1:exon
so has part: feature:1479269-1479381:1:exon
so has part: feature:1480054-1480097:1:exon

XP_033964679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1464203-1464320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1466821-1466847:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469315-1469409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1470206-1470326:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1471548-1471617:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1471714-1471746:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1472004-1472124:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1475022-1475154:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1476606-1476732:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1478852-1478944:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1479269-1479381:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1480054-1480097:1:exon

slc51a
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: slc51a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1499257..1515578
location: region:1499257-1515578:1
so has part: feature:1499257-1515578:1:exon
subclass of: SO_0000010

117465467
type: Gene
SIO_000068: ncbigene

position:1499257:1
position: 1499257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515578:1
position: 1515578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1499257-1515578:1:exon

slc51a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: slc51a
product: solute carrier family 51 subunit alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_034108272.1
SIO_010081: slc51a
subclass of: SO_0000673
so part of: slc51a
location: join(1499257..1499446,1503846..1503997,1505166..1505239,1508877..1509035,1511589..1511700,1513383..1513529,1514715..1514820,1515356..1515578)
location: region:1499257-1515578:1
so has part: feature:1499257-1499446:1:exon
so has part: feature:1503846-1503997:1:exon
so has part: feature:1505166-1505239:1:exon
so has part: feature:1508877-1509035:1:exon
so has part: feature:1511589-1511700:1:exon
so has part: feature:1513383-1513529:1:exon
so has part: feature:1514715-1514820:1:exon
so has part: feature:1515356-1515578:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1499257-1499446:1:exon

position:1499446:1
position: 1499446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1503846-1503997:1:exon

position:1503846:1
position: 1503846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1503997:1
position: 1503997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1505166-1505239:1:exon

position:1505166:1
position: 1505166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1505239:1
position: 1505239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1508877-1509035:1:exon

position:1508877:1
position: 1508877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1509035:1
position: 1509035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1511589-1511700:1:exon

position:1511589:1
position: 1511589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1511700:1
position: 1511700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1513383-1513529:1:exon

position:1513383:1
position: 1513383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1513529:1
position: 1513529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1514715-1514820:1:exon

position:1514715:1
position: 1514715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514820:1
position: 1514820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1515356-1515578:1:exon

position:1515356:1
position: 1515356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

slc51a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: slc51a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: organic solute transporter subunit alpha
translation: MDNGTTVHPSCQQKPPLAIDIIHNLDIFGIVLYSVLTFMAAVSMLVFMEECVYIYRKVPNNKKSLILWVNGAAPVIGTMSCVGMWIPRATMFTDMTSACYFAVVVFKFLILMVEEVGGDEGFLKRAGRYKLKISTGPCCCCCLCLPHVEITRRTLFLLKLGSFQFAVLKIVFTILSIVLWTNGNFDLSDLSITGTAIWINPFVGILTIIALWPVAIMFMHLRVTLRTLKIIPKYAMYQLLLILSQLQTAIINILALKGTIACTPPFSATSRGYMMGQQLLVLEMFIITLVTRLLYRRQYDPLPDEQKEINENTKMVSVHRSA
SIO_010081: slc51a
subclass of: SO_0000673
so part of: slc51a
location: join(1499377..1499446,1503846..1503997,1505166..1505239,1508877..1509035,1511589..1511700,1513383..1513529,1514715..1514820,1515356..1515504)
location: region:1499377-1515504:1
so has part: feature:1499377-1499446:1:exon
so has part: feature:1503846-1503997:1:exon
so has part: feature:1505166-1505239:1:exon
so has part: feature:1508877-1509035:1:exon
so has part: feature:1511589-1511700:1:exon
so has part: feature:1513383-1513529:1:exon
so has part: feature:1514715-1514820:1:exon
so has part: feature:1515356-1515504:1:exon

XP_033964163.1
type: Protein
SIO_000068: ncbiprotein

position:1499377:1
position: 1499377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515504:1
position: 1515504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1499377-1499446:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1503846-1503997:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1505166-1505239:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1508877-1509035:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1511589-1511700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1513383-1513529:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1514715-1514820:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1515356-1515504:1:exon

pdk3a
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: pdk3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1518325..1536114
location: region:1518325-1536114:1
so has part: feature:1518325-1536114:1:exon
subclass of: SO_0000010

117465704
type: Gene
SIO_000068: ncbigene

position:1518325:1
position: 1518325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1536114:1
position: 1536114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1518325-1536114:1:exon

pdk3a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: pdk3a
product: pyruvate dehydrogenase kinase, isozyme 3a
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_034108677.1
SIO_010081: pdk3a
subclass of: SO_0000673
so part of: pdk3a
location: join(1518325..1518721,1522797..1522938,1523660..1523731,1526776..1526960,1527226..1527315,1527576..1527653,1528968..1529044,1529139..1529240,1529329..1529436,1529822..1529935,1535538..1536114)
location: region:1518325-1536114:1
so has part: feature:1518325-1518721:1:exon
so has part: feature:1522797-1522938:1:exon
so has part: feature:1523660-1523731:1:exon
so has part: feature:1526776-1526960:1:exon
so has part: feature:1527226-1527315:1:exon
so has part: feature:1527576-1527653:1:exon
so has part: feature:1528968-1529044:1:exon
so has part: feature:1529139-1529240:1:exon
so has part: feature:1529329-1529436:1:exon
so has part: feature:1529822-1529935:1:exon
so has part: feature:1535538-1536114:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1518325-1518721:1:exon

position:1518721:1
position: 1518721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1522797-1522938:1:exon

position:1522797:1
position: 1522797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1522938:1
position: 1522938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1523660-1523731:1:exon

position:1523660:1
position: 1523660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1523731:1
position: 1523731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1526776-1526960:1:exon

position:1526776:1
position: 1526776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1526960:1
position: 1526960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1527226-1527315:1:exon

position:1527226:1
position: 1527226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1527315:1
position: 1527315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1527576-1527653:1:exon

position:1527576:1
position: 1527576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1527653:1
position: 1527653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1528968-1529044:1:exon

position:1528968:1
position: 1528968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529044:1
position: 1529044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1529139-1529240:1:exon

position:1529139:1
position: 1529139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529240:1
position: 1529240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1529329-1529436:1:exon

position:1529329:1
position: 1529329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529436:1
position: 1529436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1529822-1529935:1:exon

position:1529822:1
position: 1529822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529935:1
position: 1529935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1535538-1536114:1:exon

position:1535538:1
position: 1535538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pdk3a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: pdk3a
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 3, mitochondrial
translation: MRIFVSLLKSSNPKIEFYSRFSPSPISIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMRETNLLPDPLLGMPSVRLVQKWYMQSFVELLEYENRKPEDPQALNDFLDLLIEIRNRHNDVVPTMAAGVIEYKEKFGFDPFISSNIQYFLDRFYTNRISFRMLINQHTLLFGNDTNPAHPKHIGSIDPTCSVAEVVTDAYDTARMLCEKYYLAAPKLKIEEFNMKAPDKPIQAVYVPSHLFHMLFELFKNSMRATVELHEDNVEGLPPVKAKVTLGKEDLSVKISDRGGGVPLRKIDRLFNYMYSTAPTPSLEPGTVPLAGFGYGLPISRLYARYFQGDLKLYSMDGVGTDAVIYLKALSSESFERLPVFNKSALRHYKTSPEADDWSNPSREPRDASKSNYKAKR
SIO_010081: pdk3a
subclass of: SO_0000673
so part of: pdk3a
location: join(1518617..1518721,1522797..1522938,1523660..1523731,1526776..1526960,1527226..1527315,1527576..1527653,1528968..1529044,1529139..1529240,1529329..1529436,1529822..1529935,1535538..1535687)
location: region:1518617-1535687:1
so has part: feature:1518617-1518721:1:exon
so has part: feature:1522797-1522938:1:exon
so has part: feature:1523660-1523731:1:exon
so has part: feature:1526776-1526960:1:exon
so has part: feature:1527226-1527315:1:exon
so has part: feature:1527576-1527653:1:exon
so has part: feature:1528968-1529044:1:exon
so has part: feature:1529139-1529240:1:exon
so has part: feature:1529329-1529436:1:exon
so has part: feature:1529822-1529935:1:exon
so has part: feature:1535538-1535687:1:exon

XP_033964568.1
type: Protein
SIO_000068: ncbiprotein

position:1518617:1
position: 1518617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1535687:1
position: 1535687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1518617-1518721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1522797-1522938:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1523660-1523731:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1526776-1526960:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1527226-1527315:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1527576-1527653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1528968-1529044:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1529139-1529240:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1529329-1529436:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1529822-1529935:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1535538-1535687:1:exon

pcyt1ba
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: pcyt1ba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1546898..1567704)
location: region:1546898-1567704:-1
so has part: feature:1546898-1567704:-1:exon
subclass of: SO_0000010

117465837
type: Gene
SIO_000068: ncbigene

position:1546898:-1
position: 1546898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567704:-1
position: 1567704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1546898-1567704:-1:exon

pcyt1ba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: pcyt1ba
product: phosphate cytidylyltransferase 1, choline, beta a, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034108883.1
SIO_010081: pcyt1ba
subclass of: SO_0000673
so part of: pcyt1ba
location: complement(join(1546898..1547203,1548251..1548439,1551238..1551380,1551468..1551546,1556574..1556725,1556935..1557051,1560600..1560699,1567520..1567704))
location: region:1546898-1567704:-1
so has part: feature:1567520-1567704:-1:exon
so has part: feature:1560600-1560699:-1:exon
so has part: feature:1556935-1557051:-1:exon
so has part: feature:1556574-1556725:-1:exon
so has part: feature:1551468-1551546:-1:exon
so has part: feature:1551238-1551380:-1:exon
so has part: feature:1548251-1548439:-1:exon
so has part: feature:1546898-1547203:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1567520-1567704:-1:exon

position:1567520:-1
position: 1567520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1560600-1560699:-1:exon

position:1560600:-1
position: 1560600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1560699:-1
position: 1560699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1556935-1557051:-1:exon

position:1556935:-1
position: 1556935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1557051:-1
position: 1557051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1556574-1556725:-1:exon

position:1556574:-1
position: 1556574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1556725:-1
position: 1556725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1551468-1551546:-1:exon

position:1551468:-1
position: 1551468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1551546:-1
position: 1551546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1551238-1551380:-1:exon

position:1551238:-1
position: 1551238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1551380:-1
position: 1551380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1548251-1548439:-1:exon

position:1548251:-1
position: 1548251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548439:-1
position: 1548439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1546898-1547203:-1:exon

position:1547203:-1
position: 1547203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pcyt1ba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: pcyt1ba
product: phosphate cytidylyltransferase 1, choline, beta a, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034108881.1
SIO_010081: pcyt1ba
subclass of: SO_0000673
so part of: pcyt1ba
location: complement(join(1546898..1547197,1548251..1548439,1551238..1551380,1551468..1551546,1556574..1556725,1556935..1557051,1560600..1560699,1563110..1563276))
location: region:1546898-1563276:-1
so has part: feature:1563110-1563276:-1:exon
so has part: feature:1560600-1560699:-1:exon
so has part: feature:1556935-1557051:-1:exon
so has part: feature:1556574-1556725:-1:exon
so has part: feature:1551468-1551546:-1:exon
so has part: feature:1551238-1551380:-1:exon
so has part: feature:1548251-1548439:-1:exon
so has part: feature:1546898-1547197:-1:exon

position:1563276:-1
position: 1563276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1563110-1563276:-1:exon

position:1563110:-1
position: 1563110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1560600-1560699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556935-1557051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1556574-1556725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551468-1551546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1551238-1551380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1548251-1548439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1546898-1547197:-1:exon

position:1547197:-1
position: 1547197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pcyt1ba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: pcyt1ba
product: phosphate cytidylyltransferase 1, choline, beta a, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034108879.1
SIO_010081: pcyt1ba
subclass of: SO_0000673
so part of: pcyt1ba
location: complement(join(1546898..1547203,1548251..1548439,1551238..1551380,1551468..1551546,1556574..1556725,1556935..1557051,1560600..1560699,1563110..1563276))
location: region:1546898-1563276:-1
so has part: feature:1563110-1563276:-1:exon
so has part: feature:1560600-1560699:-1:exon
so has part: feature:1556935-1557051:-1:exon
so has part: feature:1556574-1556725:-1:exon
so has part: feature:1551468-1551546:-1:exon
so has part: feature:1551238-1551380:-1:exon
so has part: feature:1548251-1548439:-1:exon
so has part: feature:1546898-1547203:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1563110-1563276:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560600-1560699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556935-1557051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1556574-1556725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551468-1551546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1551238-1551380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1548251-1548439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1546898-1547203:-1:exon

pcyt1ba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: pcyt1ba
product: phosphate cytidylyltransferase 1, choline, beta a, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034108882.1
SIO_010081: pcyt1ba
subclass of: SO_0000673
so part of: pcyt1ba
location: complement(join(1546911..1547197,1548251..1548439,1551216..1551380,1551468..1551546,1556574..1556725,1556935..1557051,1560600..1560699,1563110..1563450))
location: region:1546911-1563450:-1
so has part: feature:1563110-1563450:-1:exon
so has part: feature:1560600-1560699:-1:exon
so has part: feature:1556935-1557051:-1:exon
so has part: feature:1556574-1556725:-1:exon
so has part: feature:1551468-1551546:-1:exon
so has part: feature:1551216-1551380:-1:exon
so has part: feature:1548251-1548439:-1:exon
so has part: feature:1546911-1547197:-1:exon

position:1546911:-1
position: 1546911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1563450:-1
position: 1563450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1563110-1563450:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560600-1560699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556935-1557051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1556574-1556725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551468-1551546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1551216-1551380:-1:exon

position:1551216:-1
position: 1551216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1548251-1548439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1546911-1547197:-1:exon

pcyt1ba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: pcyt1ba
product: phosphate cytidylyltransferase 1, choline, beta a, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034108880.1
SIO_010081: pcyt1ba
subclass of: SO_0000673
so part of: pcyt1ba
location: complement(join(1546911..1547203,1548251..1548439,1551216..1551380,1551468..1551546,1556574..1556725,1556935..1557051,1560600..1560699,1563110..1563450))
location: region:1546911-1563450:-1
so has part: feature:1563110-1563450:-1:exon
so has part: feature:1560600-1560699:-1:exon
so has part: feature:1556935-1557051:-1:exon
so has part: feature:1556574-1556725:-1:exon
so has part: feature:1551468-1551546:-1:exon
so has part: feature:1551216-1551380:-1:exon
so has part: feature:1548251-1548439:-1:exon
so has part: feature:1546911-1547203:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1563110-1563450:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560600-1560699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556935-1557051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1556574-1556725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551468-1551546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1551216-1551380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1548251-1548439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1546911-1547203:-1:exon

pcyt1ba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: pcyt1ba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline-phosphate cytidylyltransferase B isoform X5
translation: MVKQRRVRAHSCCASVCCRRGTHTTLTKPAIFARESSCDCRAPHEKLTIAQARRGTPVDRPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHKFKGFTVMTEFERYEALRHCRYVDEVLRDAPWTLTPEFLEKHKIDFVAHDDIPYSSAGSEDVYKHIKEAGMFVPTQRTEGISTSDLITRIVRDYDVYARRNLQRGYTAKELNVSYINEKKYRLQNQVDRMKEKVRTVEEKSKHFVYRVEEKSADLIQKWEEKSREFIGNFLELFGPDGTWKQVFQERSGRMLSYALSPRGSPCNSPPRELSPLRSPSPPCLPARWHNARPSPPNSPKGASASISSMSEGDEDEK
SIO_010081: pcyt1ba
subclass of: SO_0000673
so part of: pcyt1ba
location: complement(join(1546979..1547203,1548251..1548439,1551238..1551380,1551468..1551546,1556574..1556725,1556935..1557051,1560600..1560699,1567520..1567591))
location: region:1546979-1567591:-1
so has part: feature:1567520-1567591:-1:exon
so has part: feature:1560600-1560699:-1:exon
so has part: feature:1556935-1557051:-1:exon
so has part: feature:1556574-1556725:-1:exon
so has part: feature:1551468-1551546:-1:exon
so has part: feature:1551238-1551380:-1:exon
so has part: feature:1548251-1548439:-1:exon
so has part: feature:1546979-1547203:-1:exon

XP_033964774.1
type: Protein
SIO_000068: ncbiprotein

position:1546979:-1
position: 1546979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567591:-1
position: 1567591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1567520-1567591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560600-1560699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556935-1557051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1556574-1556725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551468-1551546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1551238-1551380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1548251-1548439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1546979-1547203:-1:exon

pcyt1ba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: pcyt1ba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline-phosphate cytidylyltransferase B isoform X3
translation: MEELEHTCPHPRTTLTKPAIFARESSCDCRAPHEKLTIAQARRGTPVDRPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHKFKGFTVMTEFERYEALRHCRYVDEVLRDAPWTLTPEFLEKHKIDFVAHDDIPYSSAGSEDVYKHIKEAGMFVPTQRTEGISTSDLITRIVRDYDVYARRNLQRGYTAKELNVSYINEKKYRLQNQVDRMKEKVRTVEEKSKHFVYRVEEKSADLIQKWEEKSREFIGNFLELFGPDGTWVFQERSGRMLSYALSPRGSPCNSPPRELSPLRSPSPPCLPARWHNARPSPPNSPKGASASISSMSEGDEDEK
SIO_010081: pcyt1ba
subclass of: SO_0000673
so part of: pcyt1ba
location: complement(join(1546979..1547197,1548251..1548439,1551238..1551380,1551468..1551546,1556574..1556725,1556935..1557051,1560600..1560699,1563110..1563148))
location: region:1546979-1563148:-1
so has part: feature:1563110-1563148:-1:exon
so has part: feature:1560600-1560699:-1:exon
so has part: feature:1556935-1557051:-1:exon
so has part: feature:1556574-1556725:-1:exon
so has part: feature:1551468-1551546:-1:exon
so has part: feature:1551238-1551380:-1:exon
so has part: feature:1548251-1548439:-1:exon
so has part: feature:1546979-1547197:-1:exon

XP_033964772.1
type: Protein
SIO_000068: ncbiprotein

position:1563148:-1
position: 1563148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1563110-1563148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560600-1560699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556935-1557051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1556574-1556725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551468-1551546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1551238-1551380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1548251-1548439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1546979-1547197:-1:exon

pcyt1ba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: pcyt1ba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline-phosphate cytidylyltransferase B isoform X1
translation: MEELEHTCPHPRTTLTKPAIFARESSCDCRAPHEKLTIAQARRGTPVDRPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHKFKGFTVMTEFERYEALRHCRYVDEVLRDAPWTLTPEFLEKHKIDFVAHDDIPYSSAGSEDVYKHIKEAGMFVPTQRTEGISTSDLITRIVRDYDVYARRNLQRGYTAKELNVSYINEKKYRLQNQVDRMKEKVRTVEEKSKHFVYRVEEKSADLIQKWEEKSREFIGNFLELFGPDGTWKQVFQERSGRMLSYALSPRGSPCNSPPRELSPLRSPSPPCLPARWHNARPSPPNSPKGASASISSMSEGDEDEK
SIO_010081: pcyt1ba
subclass of: SO_0000673
so part of: pcyt1ba
location: complement(join(1546979..1547203,1548251..1548439,1551238..1551380,1551468..1551546,1556574..1556725,1556935..1557051,1560600..1560699,1563110..1563148))
location: region:1546979-1563148:-1
so has part: feature:1563110-1563148:-1:exon
so has part: feature:1560600-1560699:-1:exon
so has part: feature:1556935-1557051:-1:exon
so has part: feature:1556574-1556725:-1:exon
so has part: feature:1551468-1551546:-1:exon
so has part: feature:1551238-1551380:-1:exon
so has part: feature:1548251-1548439:-1:exon
so has part: feature:1546979-1547203:-1:exon

XP_033964770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1563110-1563148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560600-1560699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556935-1557051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1556574-1556725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551468-1551546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1551238-1551380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1548251-1548439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1546979-1547203:-1:exon

pcyt1ba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: pcyt1ba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline-phosphate cytidylyltransferase B isoform X4
translation: MEELEHTCPHPRTTLTKPAIFARESSCDCRAPHEKLTIAQARRGTPVDRPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHKFKGFTVMTEFERYEALRHCRYVDEVLRDAPWTLTPEFLEKHKIDFVAHDDIPYSSAGSEDVYKHIKEAGMFVPTQRTEGISTSDLITRIVRDYDVYARRNLQRGYTAKELNVSYINVRAPACQGEEVPAAEPGGPDEGEGAHGGGEEQTLCLPGGGEERRPHPEVGGEIQRVHRKLPGTVWTRRDLGVSGAQWTDAVLRSVPPRVSLQQPPPRTLPPALPVPPLPPRPLAQRTAIAPKLPQRSVGLHQQHE
SIO_010081: pcyt1ba
subclass of: SO_0000673
so part of: pcyt1ba
location: complement(join(1547001..1547197,1548251..1548439,1551216..1551380,1551468..1551546,1556574..1556725,1556935..1557051,1560600..1560699,1563110..1563148))
location: region:1547001-1563148:-1
so has part: feature:1563110-1563148:-1:exon
so has part: feature:1560600-1560699:-1:exon
so has part: feature:1556935-1557051:-1:exon
so has part: feature:1556574-1556725:-1:exon
so has part: feature:1551468-1551546:-1:exon
so has part: feature:1551216-1551380:-1:exon
so has part: feature:1548251-1548439:-1:exon
so has part: feature:1547001-1547197:-1:exon

XP_033964773.1
type: Protein
SIO_000068: ncbiprotein

position:1547001:-1
position: 1547001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1563110-1563148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560600-1560699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556935-1557051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1556574-1556725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551468-1551546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1551216-1551380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1548251-1548439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1547001-1547197:-1:exon

pcyt1ba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: pcyt1ba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline-phosphate cytidylyltransferase B isoform X2
translation: MEELEHTCPHPRTTLTKPAIFARESSCDCRAPHEKLTIAQARRGTPVDRPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHKFKGFTVMTEFERYEALRHCRYVDEVLRDAPWTLTPEFLEKHKIDFVAHDDIPYSSAGSEDVYKHIKEAGMFVPTQRTEGISTSDLITRIVRDYDVYARRNLQRGYTAKELNVSYINVRAPACQGEEVPAAEPGGPDEGEGAHGGGEEQTLCLPGGGEERRPHPEVGGEIQRVHRKLPGTVWTRRDLETGVSGAQWTDAVLRSVPPRVSLQQPPPRTLPPALPVPPLPPRPLAQRTAIAPKLPQRSVGLHQQHE
SIO_010081: pcyt1ba
subclass of: SO_0000673
so part of: pcyt1ba
location: complement(join(1547001..1547203,1548251..1548439,1551216..1551380,1551468..1551546,1556574..1556725,1556935..1557051,1560600..1560699,1563110..1563148))
location: region:1547001-1563148:-1
so has part: feature:1563110-1563148:-1:exon
so has part: feature:1560600-1560699:-1:exon
so has part: feature:1556935-1557051:-1:exon
so has part: feature:1556574-1556725:-1:exon
so has part: feature:1551468-1551546:-1:exon
so has part: feature:1551216-1551380:-1:exon
so has part: feature:1548251-1548439:-1:exon
so has part: feature:1547001-1547203:-1:exon

XP_033964771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1563110-1563148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560600-1560699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556935-1557051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1556574-1556725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551468-1551546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1551216-1551380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1548251-1548439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1547001-1547203:-1:exon

pola1
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: pola1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1569042..1660850
location: region:1569042-1660850:1
so has part: feature:1569042-1660850:1:exon
subclass of: SO_0000010

117465924
type: Gene
SIO_000068: ncbigene

position:1569042:1
position: 1569042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1660850:1
position: 1660850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1569042-1660850:1:exon

pola1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: pola1
product: polymerase (DNA directed), alpha 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034109021.1
SIO_010081: pola1
subclass of: SO_0000673
so part of: pola1
location: join(1569042..1569171,1571055..1571170,1571519..1571615,1571725..1571802,1576075..1576190,1576275..1576337,1577167..1577259,1577338..1577494,1579622..1579781,1580575..1580747,1581045..1581157,1582046..1582159,1582238..1582312,1583945..1584083,1584433..1584587,1584684..1584768,1585082..1585143,1586085..1586174,1586265..1586381,1587354..1587529,1587940..1588069,1588407..1588526,1593789..1593873,1593949..1594076,1594253..1594402,1594515..1594637,1611465..1611497,1611722..1611814,1611894..1612099,1612543..1612675,1616939..1617070,1617290..1617464,1620746..1620927,1630346..1630477,1641904..1642020,1648299..1648398,1659983..1660850)
location: region:1569042-1660850:1
so has part: feature:1569042-1569171:1:exon
so has part: feature:1571055-1571170:1:exon
so has part: feature:1571519-1571615:1:exon
so has part: feature:1571725-1571802:1:exon
so has part: feature:1576075-1576190:1:exon
so has part: feature:1576275-1576337:1:exon
so has part: feature:1577167-1577259:1:exon
so has part: feature:1577338-1577494:1:exon
so has part: feature:1579622-1579781:1:exon
so has part: feature:1580575-1580747:1:exon
so has part: feature:1581045-1581157:1:exon
so has part: feature:1582046-1582159:1:exon
so has part: feature:1582238-1582312:1:exon
so has part: feature:1583945-1584083:1:exon
so has part: feature:1584433-1584587:1:exon
so has part: feature:1584684-1584768:1:exon
so has part: feature:1585082-1585143:1:exon
so has part: feature:1586085-1586174:1:exon
so has part: feature:1586265-1586381:1:exon
so has part: feature:1587354-1587529:1:exon
so has part: feature:1587940-1588069:1:exon
so has part: feature:1588407-1588526:1:exon
so has part: feature:1593789-1593873:1:exon
so has part: feature:1593949-1594076:1:exon
so has part: feature:1594253-1594402:1:exon
so has part: feature:1594515-1594637:1:exon
so has part: feature:1611465-1611497:1:exon
so has part: feature:1611722-1611814:1:exon
so has part: feature:1611894-1612099:1:exon
so has part: feature:1612543-1612675:1:exon
so has part: feature:1616939-1617070:1:exon
so has part: feature:1617290-1617464:1:exon
so has part: feature:1620746-1620927:1:exon
so has part: feature:1630346-1630477:1:exon
so has part: feature:1641904-1642020:1:exon
so has part: feature:1648299-1648398:1:exon
so has part: feature:1659983-1660850:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1569042-1569171:1:exon

position:1569171:1
position: 1569171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1571055-1571170:1:exon

position:1571055:1
position: 1571055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1571170:1
position: 1571170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1571519-1571615:1:exon

position:1571519:1
position: 1571519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1571615:1
position: 1571615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1571725-1571802:1:exon

position:1571725:1
position: 1571725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1571802:1
position: 1571802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1576075-1576190:1:exon

position:1576075:1
position: 1576075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1576190:1
position: 1576190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1576275-1576337:1:exon

position:1576275:1
position: 1576275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1576337:1
position: 1576337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1577167-1577259:1:exon

position:1577167:1
position: 1577167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1577259:1
position: 1577259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1577338-1577494:1:exon

position:1577338:1
position: 1577338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1577494:1
position: 1577494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1579622-1579781:1:exon

position:1579622:1
position: 1579622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1579781:1
position: 1579781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1580575-1580747:1:exon

position:1580575:1
position: 1580575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1580747:1
position: 1580747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1581045-1581157:1:exon

position:1581045:1
position: 1581045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581157:1
position: 1581157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1582046-1582159:1:exon

position:1582046:1
position: 1582046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582159:1
position: 1582159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1582238-1582312:1:exon

position:1582238:1
position: 1582238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582312:1
position: 1582312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1583945-1584083:1:exon

position:1583945:1
position: 1583945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584083:1
position: 1584083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1584433-1584587:1:exon

position:1584433:1
position: 1584433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584587:1
position: 1584587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1584684-1584768:1:exon

position:1584684:1
position: 1584684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584768:1
position: 1584768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1585082-1585143:1:exon

position:1585082:1
position: 1585082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1585143:1
position: 1585143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1586085-1586174:1:exon

position:1586085:1
position: 1586085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586174:1
position: 1586174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1586265-1586381:1:exon

position:1586265:1
position: 1586265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586381:1
position: 1586381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1587354-1587529:1:exon

position:1587354:1
position: 1587354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587529:1
position: 1587529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1587940-1588069:1:exon

position:1587940:1
position: 1587940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1588069:1
position: 1588069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1588407-1588526:1:exon

position:1588407:1
position: 1588407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1588526:1
position: 1588526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1593789-1593873:1:exon

position:1593789:1
position: 1593789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1593873:1
position: 1593873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1593949-1594076:1:exon

position:1593949:1
position: 1593949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1594076:1
position: 1594076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1594253-1594402:1:exon

position:1594253:1
position: 1594253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1594402:1
position: 1594402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1594515-1594637:1:exon

position:1594515:1
position: 1594515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1594637:1
position: 1594637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1611465-1611497:1:exon

position:1611465:1
position: 1611465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1611497:1
position: 1611497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1611722-1611814:1:exon

position:1611722:1
position: 1611722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1611814:1
position: 1611814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1611894-1612099:1:exon

position:1611894:1
position: 1611894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1612099:1
position: 1612099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1612543-1612675:1:exon

position:1612543:1
position: 1612543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1612675:1
position: 1612675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1616939-1617070:1:exon

position:1616939:1
position: 1616939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1617070:1
position: 1617070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1617290-1617464:1:exon

position:1617290:1
position: 1617290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1617464:1
position: 1617464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1620746-1620927:1:exon

position:1620746:1
position: 1620746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1620927:1
position: 1620927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1630346-1630477:1:exon

position:1630346:1
position: 1630346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1630477:1
position: 1630477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1641904-1642020:1:exon

position:1641904:1
position: 1641904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1642020:1
position: 1642020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1648299-1648398:1:exon

position:1648299:1
position: 1648299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648398:1
position: 1648398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1659983-1660850:1:exon

position:1659983:1
position: 1659983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pola1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: pola1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase alpha catalytic subunit
translation: MAPVSNPEKDMDAPDAPDGDAGGLAMSRSRREKKEKTGRKSALEQLKKAKRGEKIKYEVEKFSSVYEEVDEQQYSEMVRGRQEDDWIIDDDGTGYVEDGREIFDDDLDDDVVENNKGKAGSKGAASKKNMKKPVVAKSNTIKSLFMNSNVKRPAEKDVDLSKDDLLGDILQDLHSEKPSLLTPPPGIALKKKKSLGPPRNPFSIRQKESPSASGQKAKVIVRPPPSDPTPRPSSRLPSSSSAPPVKKQGAAVEKMEEEQADDALGFDEVDFDEPMEVGLEDEKPAVKDDPEPRSEAAEVKVEPKAEPQDPVLVSSRAGSSWGQQEEGGVSEAQVEVQVDSSKLPLVEGADGEQVFRFYWLDAFEDAYNQPGVVYLFGKVWIESAASHVSCCVSVKNIERTMYLLPREYKVNTKSGEVSDSPVGMMDVYQEFNELSEKFRIMKFKSKKVEKSYAFEIPDIPSQSEYLEVRYSAEFPALPLDLKGATFSHTFGTNISSLEHFLLSRKIKGPCWLDIKTPQLMSQPVSWCKVEALAVRTDLVSVVKDLSPPPITVMSISLKTIQNPKTHHNEIVSLAALVHCEFQMDKAPPQPPYQTHFCVVSKPVDCIFPYDFQDAVKKKDGKVEIAATERTLLGFFLAKMHKIDPDVLVGHDIFGFDLEVILQRINVCKVPHWSKIGRLRRSNMPKLGGRGSFAEKSATCGRLVCDVEISAKELIRCKSYHLTELAAQVLKTERATIPQEDIKNLYSDSPHLLYLLELTWMDAKLILQMMCELNVLPLALQITNIAGNVMSRTLMGGRAERNEFLLLHAFHDKNYIVPDKLSFKKTQMEMGEGEEDGGKGKRKKKAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQREAYNAKKKNNEEDGSDDIPEVPDQSLEMGILPKEIRKLVERRKQVKQLMKQQDLNSDLYLQYDIRQKALKLTANSMYGCLGFSFSRFYAKPLAALVTHKGREILMHTKDLVQKMNLEVIYGDTDSIMINTNSKSLEEVYKLGNKVKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVENHGEGRYSVKQELKGLDIVRRDWCDLAKECGNYVIGQILSDQSRDVIVENIQKHLVELGEKVAAGSVPLNQYEINKALTKDPQDYPDKKSLPHVHVALWINSQGGHRVKAGDTVSYIICKDGSTLAASQRAYALEQLQKQEGLSLDVQYYLAQQVHPVVSRICDPIEGIDGVLIATWLGLDPGQFRAHQQFQREEETDGMLGAPVQLTDEERFKDCESFTFTCPQCSTDNIYTCVFEGAGLKCEPSLLRCCHLPCGERPIDQAVNICNKLLLDIRRHIKKYYSGWLLCEDQACMNRTRRLPIAFSRHGPICPACTRATLRPEYSEKALYNQLCFYRFIFDWDHAVAKVLQGDKERTRAKQWSRERDLYRRLKEVPDNALATSGYSEINLAKLFQAFSSLK
SIO_010081: pola1
subclass of: SO_0000673
so part of: pola1
location: join(1569114..1569171,1571055..1571170,1571519..1571615,1571725..1571802,1576075..1576190,1576275..1576337,1577167..1577259,1577338..1577494,1579622..1579781,1580575..1580747,1581045..1581157,1582046..1582159,1582238..1582312,1583945..1584083,1584433..1584587,1584684..1584768,1585082..1585143,1586085..1586174,1586265..1586381,1587354..1587529,1587940..1588069,1588407..1588526,1593789..1593873,1593949..1594076,1594253..1594402,1594515..1594637,1611465..1611497,1611722..1611814,1611894..1612099,1612543..1612675,1616939..1617070,1617290..1617464,1620746..1620927,1630346..1630477,1641904..1642020,1648299..1648398,1659983..1660119)
location: region:1569114-1660119:1
so has part: feature:1569114-1569171:1:exon
so has part: feature:1571055-1571170:1:exon
so has part: feature:1571519-1571615:1:exon
so has part: feature:1571725-1571802:1:exon
so has part: feature:1576075-1576190:1:exon
so has part: feature:1576275-1576337:1:exon
so has part: feature:1577167-1577259:1:exon
so has part: feature:1577338-1577494:1:exon
so has part: feature:1579622-1579781:1:exon
so has part: feature:1580575-1580747:1:exon
so has part: feature:1581045-1581157:1:exon
so has part: feature:1582046-1582159:1:exon
so has part: feature:1582238-1582312:1:exon
so has part: feature:1583945-1584083:1:exon
so has part: feature:1584433-1584587:1:exon
so has part: feature:1584684-1584768:1:exon
so has part: feature:1585082-1585143:1:exon
so has part: feature:1586085-1586174:1:exon
so has part: feature:1586265-1586381:1:exon
so has part: feature:1587354-1587529:1:exon
so has part: feature:1587940-1588069:1:exon
so has part: feature:1588407-1588526:1:exon
so has part: feature:1593789-1593873:1:exon
so has part: feature:1593949-1594076:1:exon
so has part: feature:1594253-1594402:1:exon
so has part: feature:1594515-1594637:1:exon
so has part: feature:1611465-1611497:1:exon
so has part: feature:1611722-1611814:1:exon
so has part: feature:1611894-1612099:1:exon
so has part: feature:1612543-1612675:1:exon
so has part: feature:1616939-1617070:1:exon
so has part: feature:1617290-1617464:1:exon
so has part: feature:1620746-1620927:1:exon
so has part: feature:1630346-1630477:1:exon
so has part: feature:1641904-1642020:1:exon
so has part: feature:1648299-1648398:1:exon
so has part: feature:1659983-1660119:1:exon

XP_033964912.1
type: Protein
SIO_000068: ncbiprotein

position:1569114:1
position: 1569114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1660119:1
position: 1660119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1569114-1569171:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1571055-1571170:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1571519-1571615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1571725-1571802:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1576075-1576190:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1576275-1576337:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1577167-1577259:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1577338-1577494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1579622-1579781:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1580575-1580747:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1581045-1581157:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1582046-1582159:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1582238-1582312:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1583945-1584083:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1584433-1584587:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1584684-1584768:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1585082-1585143:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1586085-1586174:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1586265-1586381:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1587354-1587529:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1587940-1588069:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1588407-1588526:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1593789-1593873:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1593949-1594076:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1594253-1594402:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1594515-1594637:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1611465-1611497:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1611722-1611814:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1611894-1612099:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1612543-1612675:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1616939-1617070:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1617290-1617464:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1620746-1620927:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1630346-1630477:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1641904-1642020:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1648299-1648398:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1659983-1660119:1:exon

arxa
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: arxa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1667400..1674656)
location: region:1667400-1674656:-1
so has part: feature:1667400-1674656:-1:exon
subclass of: SO_0000010

117465844
type: Gene
SIO_000068: ncbigene

position:1667400:-1
position: 1667400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1674656:-1
position: 1674656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1667400-1674656:-1:exon

arxa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: arxa
product: aristaless related homeobox a, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034108892.1
SIO_010081: arxa
subclass of: SO_0000673
so part of: arxa
location: complement(join(1667400..1667664,1669356..1669687,1671996..1672041,1673270..1673825,1674291..1674656))
location: region:1667400-1674656:-1
so has part: feature:1674291-1674656:-1:exon
so has part: feature:1673270-1673825:-1:exon
so has part: feature:1671996-1672041:-1:exon
so has part: feature:1669356-1669687:-1:exon
so has part: feature:1667400-1667664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1674291-1674656:-1:exon

position:1674291:-1
position: 1674291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1673270-1673825:-1:exon

position:1673270:-1
position: 1673270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1673825:-1
position: 1673825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1671996-1672041:-1:exon

position:1671996:-1
position: 1671996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1672041:-1
position: 1672041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1669356-1669687:-1:exon

position:1669356:-1
position: 1669356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1669687:-1
position: 1669687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1667400-1667664:-1:exon

position:1667664:-1
position: 1667664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

arxa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: arxa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aristaless-related homeobox protein isoform X1
translation: MNRSVDMSGQFEEDLHERAERKSSKSPTLLSSYCIDSILGRRSPCKVRIIGAQSLPGRGELDKADRSTKDPFSLSADMHLPPKLRRLYGVGGKFLHEHPDSLDRERLLMEASDSLKISQAPQVSISRSKSYRENASLSRGEGDQSPGEGSEDGSLVELGPLKFEEDAGKEEENCGDAAALSPKDEERESLNAGDGDGRDGEDSVCLSAGSDSEECMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGVPGHHSGLPFPGALTAGHPLSHYLEGGPFPSHHHPALESAWTAAAAAAAAFPGLAPPPHNGSAPQLGSPLGLGTFLGTAAMFRHPAFMGPTFGRLFSGMGSLSSASTAAALLRQSAPPPVEAPPHPLLSDPSSSGPPHSAADRRASSIAALRLKAKEHSAQLTQLNINLPSGGAGKEVC
SIO_010081: arxa
subclass of: SO_0000673
so part of: arxa
location: complement(join(1667406..1667664,1669356..1669687,1671996..1672041,1673270..1673825,1674291..1674486))
location: region:1667406-1674486:-1
so has part: feature:1674291-1674486:-1:exon
so has part: feature:1673270-1673825:-1:exon
so has part: feature:1671996-1672041:-1:exon
so has part: feature:1669356-1669687:-1:exon
so has part: feature:1667406-1667664:-1:exon

XP_033964783.1
type: Protein
SIO_000068: ncbiprotein

position:1667406:-1
position: 1667406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1674486:-1
position: 1674486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1674291-1674486:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1673270-1673825:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1671996-1672041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1669356-1669687:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1667406-1667664:-1:exon

arxa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: arxa
product: aristaless related homeobox a, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034108893.1
SIO_010081: arxa
subclass of: SO_0000673
so part of: arxa
location: complement(join(1667551..1667690,1669356..1669687,1671996..1672041,1673270..1673825,1674291..1674656))
location: region:1667551-1674656:-1
so has part: feature:1674291-1674656:-1:exon
so has part: feature:1673270-1673825:-1:exon
so has part: feature:1671996-1672041:-1:exon
so has part: feature:1669356-1669687:-1:exon
so has part: feature:1667551-1667690:-1:exon

position:1667551:-1
position: 1667551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1674291-1674656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1673270-1673825:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1671996-1672041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1669356-1669687:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1667551-1667690:-1:exon

position:1667690:-1
position: 1667690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

arxa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: arxa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aristaless-related homeobox protein isoform X2
translation: MNRSVDMSGQFEEDLHERAERKSSKSPTLLSSYCIDSILGRRSPCKVRIIGAQSLPGRGELDKADRSTKDPFSLSADMHLPPKLRRLYGVGGKFLHEHPDSLDRERLLMEASDSLKISQAPQVSISRSKSYRENASLSRGEGDQSPGEGSEDGSLVELGPLKFEEDAGKEEENCGDAAALSPKDEERESLNAGDGDGRDGEDSVCLSAGSDSEECMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGVPGHHSGLPFPGALTAGHPLSHYLEGGPFPSHHHPALESAWTAAAAAAAAFPGLAPPPHNGSAPQLGSPLGLGTFLGTAAMFRHPAFMGPTFGRLSHFCVPAGSSPVWVPCPVLPRLQRSSGSPPPPL
SIO_010081: arxa
subclass of: SO_0000673
so part of: arxa
location: complement(join(1667585..1667690,1669356..1669687,1671996..1672041,1673270..1673825,1674291..1674486))
location: region:1667585-1674486:-1
so has part: feature:1674291-1674486:-1:exon
so has part: feature:1673270-1673825:-1:exon
so has part: feature:1671996-1672041:-1:exon
so has part: feature:1669356-1669687:-1:exon
so has part: feature:1667585-1667690:-1:exon

XP_033964784.1
type: Protein
SIO_000068: ncbiprotein

position:1667585:-1
position: 1667585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1674291-1674486:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1673270-1673825:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1671996-1672041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1669356-1669687:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1667585-1667690:-1:exon

hgd
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: hgd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1692390..1704813
location: region:1692390-1704813:1
so has part: feature:1692390-1704813:1:exon
subclass of: SO_0000010

117465761
type: Gene
SIO_000068: ncbigene

position:1692390:1
position: 1692390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1704813:1
position: 1704813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1692390-1704813:1:exon

hgd
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: hgd
product: homogentisate 1,2-dioxygenase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034108771.1
SIO_010081: hgd
subclass of: SO_0000673
so part of: hgd
location: join(1692390..1692533,1693445..1693516,1693602..1693690,1695566..1695671,1696273..1696332,1696408..1696499,1696592..1696626,1696736..1696815,1696997..1697096,1698112..1698236,1699837..1699941,1700080..1700206,1701119..1701300,1704484..1704813)
location: region:1692390-1704813:1
so has part: feature:1692390-1692533:1:exon
so has part: feature:1693445-1693516:1:exon
so has part: feature:1693602-1693690:1:exon
so has part: feature:1695566-1695671:1:exon
so has part: feature:1696273-1696332:1:exon
so has part: feature:1696408-1696499:1:exon
so has part: feature:1696592-1696626:1:exon
so has part: feature:1696736-1696815:1:exon
so has part: feature:1696997-1697096:1:exon
so has part: feature:1698112-1698236:1:exon
so has part: feature:1699837-1699941:1:exon
so has part: feature:1700080-1700206:1:exon
so has part: feature:1701119-1701300:1:exon
so has part: feature:1704484-1704813:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1692390-1692533:1:exon

position:1692533:1
position: 1692533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1693445-1693516:1:exon

position:1693445:1
position: 1693445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1693516:1
position: 1693516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1693602-1693690:1:exon

position:1693602:1
position: 1693602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1693690:1
position: 1693690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1695566-1695671:1:exon

position:1695566:1
position: 1695566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1695671:1
position: 1695671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1696273-1696332:1:exon

position:1696273:1
position: 1696273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696332:1
position: 1696332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1696408-1696499:1:exon

position:1696408:1
position: 1696408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696499:1
position: 1696499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1696592-1696626:1:exon

position:1696592:1
position: 1696592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696626:1
position: 1696626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1696736-1696815:1:exon

position:1696736:1
position: 1696736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696815:1
position: 1696815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1696997-1697096:1:exon

position:1696997:1
position: 1696997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1697096:1
position: 1697096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1698112-1698236:1:exon

position:1698112:1
position: 1698112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698236:1
position: 1698236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1699837-1699941:1:exon

position:1699837:1
position: 1699837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1699941:1
position: 1699941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1700080-1700206:1:exon

position:1700080:1
position: 1700080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1700206:1
position: 1700206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1701119-1701300:1:exon

position:1701119:1
position: 1701119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1701300:1
position: 1701300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1704484-1704813:1:exon

position:1704484:1
position: 1704484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hgd
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: hgd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homogentisate 1,2-dioxygenase
translation: MAGLKYMSGFGNDLSSEDPRCPGSLPEGQNNPQVCPYGLYSEQLSGSAFTCPRPANKRSWFYRILPSVKHKPFTAVPCGNLTENWNEVEPDPNQMRWLPFTIPKSTEKEVDFVAGLHTLCGAGDAKSRNGIGIHMFTCNTSMVDRCFNNSDGDFLIVPQQGEILITTEFGKIMVEPNEICVIQQGMRFSVDVFGETRGYILEVYGAHYELPDLGPIGANGLANPRDFLCPVAWYEDREVATGYTVINKYQGKLFACQQDFSPFNVVAWHGNYTPYKYNLKNFMVINAVAFDHADPSIFTVLTAKSTRPGVAIADFVIFPPRWGVADNTFRPPYYHRNCMSEFMGLIKGHYEAKAEGFQPGGGSLHSMMTPHGPDGECFEKNSSSELRPERVAEGTMAFMFESSFSMAVTKWGLETCQRLDKSYYHCWESLRSHFNPNWKPSKQ
SIO_010081: hgd
subclass of: SO_0000673
so part of: hgd
location: join(1692519..1692533,1693445..1693516,1693602..1693690,1695566..1695671,1696273..1696332,1696408..1696499,1696592..1696626,1696736..1696815,1696997..1697096,1698112..1698236,1699837..1699941,1700080..1700206,1701119..1701300,1704484..1704627)
location: region:1692519-1704627:1
so has part: feature:1692519-1692533:1:exon
so has part: feature:1693445-1693516:1:exon
so has part: feature:1693602-1693690:1:exon
so has part: feature:1695566-1695671:1:exon
so has part: feature:1696273-1696332:1:exon
so has part: feature:1696408-1696499:1:exon
so has part: feature:1696592-1696626:1:exon
so has part: feature:1696736-1696815:1:exon
so has part: feature:1696997-1697096:1:exon
so has part: feature:1698112-1698236:1:exon
so has part: feature:1699837-1699941:1:exon
so has part: feature:1700080-1700206:1:exon
so has part: feature:1701119-1701300:1:exon
so has part: feature:1704484-1704627:1:exon

XP_033964662.1
type: Protein
SIO_000068: ncbiprotein

position:1692519:1
position: 1692519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1704627:1
position: 1704627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1692519-1692533:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1693445-1693516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1693602-1693690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1695566-1695671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1696273-1696332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1696408-1696499:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1696592-1696626:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1696736-1696815:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1696997-1697096:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1698112-1698236:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1699837-1699941:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1700080-1700206:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1701119-1701300:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1704484-1704627:1:exon

ndufb4
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: ndufb4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1706189..1708450)
location: region:1706189-1708450:-1
so has part: feature:1706189-1708450:-1:exon
subclass of: SO_0000010

117465783
type: Gene
SIO_000068: ncbigene

position:1706189:-1
position: 1706189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1708450:-1
position: 1708450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1706189-1708450:-1:exon

ndufb4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: ndufb4
product: NADH:ubiquinone oxidoreductase subunit B4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_034108800.1
SIO_010081: ndufb4
subclass of: SO_0000673
so part of: ndufb4
location: complement(join(1706189..1706340,1707305..1707448,1708238..1708450))
location: region:1706189-1708450:-1
so has part: feature:1708238-1708450:-1:exon
so has part: feature:1707305-1707448:-1:exon
so has part: feature:1706189-1706340:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1708238-1708450:-1:exon

position:1708238:-1
position: 1708238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1707305-1707448:-1:exon

position:1707305:-1
position: 1707305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1707448:-1
position: 1707448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1706189-1706340:-1:exon

position:1706340:-1
position: 1706340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ndufb4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: ndufb4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4
translation: MADYKEAPLASRPKTLDPNEYFNLSLEYRRAEEERSAIRSNLKLQYQTQLNNPHRKALIEDPALNRWMYARSHTYPHFKATFKTSLTGLLFGVVPIVALYYLFKTDRDKKEADIKAGKYDRRFSLTS
SIO_010081: ndufb4
subclass of: SO_0000673
so part of: ndufb4
location: complement(join(1706278..1706340,1707305..1707448,1708238..1708414))
location: region:1706278-1708414:-1
so has part: feature:1708238-1708414:-1:exon
so has part: feature:1707305-1707448:-1:exon
so has part: feature:1706278-1706340:-1:exon

XP_033964691.1
type: Protein
SIO_000068: ncbiprotein

position:1706278:-1
position: 1706278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1708414:-1
position: 1708414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1708238-1708414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1707305-1707448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1706278-1706340:-1:exon

LOC117465944
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1708971..1709742
location: region:1708971-1709742:1
so has part: feature:1708971-1709742:1:exon
subclass of: SO_0000010

117465944
type: Gene
SIO_000068: ncbigene

position:1708971:1
position: 1708971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1709742:1
position: 1709742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1708971-1709742:1:exon

LOC117465944
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465944
product: sperm-associated antigen 16 protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034109055.1
SIO_010081: LOC117465944
subclass of: SO_0000673
so part of: LOC117465944
location: 1708971..1709742
location: region:1708971-1709742:1
so has part: feature:1708971-1709742:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1708971-1709742:1:exon

LOC117465944
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 16 protein-like
translation: MSADKKVKEKVSLSESEDGFQYEEVSLGDDWSLTEGEEDLEATVKAIQERAEAAAALRKTAPSTPQKQEAADDFLRTFLVHMNMTETLDCFQTEWTEMVQRGGLDTEKIGLVPQVYTENQSLTGELETAQREMEEYRRAAAAGALTLERVQRNRDFHSLQYKRVVQEKNKLIEEMKKLTVQCNNYEPEVKRMNEKYQTVLKQTMLVALEKDKALGEEGSGNMTHEKPPSPAKSARTQTR
SIO_010081: LOC117465944
subclass of: SO_0000673
so part of: LOC117465944
location: 1708978..1709697
location: region:1708978-1709697:1
so has part: feature:1708978-1709697:1:exon

XP_033964946.1
type: Protein
SIO_000068: ncbiprotein

position:1708978:1
position: 1708978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1709697:1
position: 1709697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1708978-1709697:1:exon

si:dkey-12l12.1
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: si:dkey-12l12.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1717701..1726120)
location: region:1717701-1726120:-1
so has part: feature:1717701-1726120:-1:exon
subclass of: SO_0000010

117465845
type: Gene
SIO_000068: ncbigene

position:1717701:-1
position: 1717701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1726120:-1
position: 1726120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1717701-1726120:-1:exon

si:dkey-12l12.1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: si:dkey-12l12.1
product: uncharacterized si:dkey-12l12.1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_034108894.1
SIO_010081: si:dkey-12l12.1
subclass of: SO_0000673
so part of: si:dkey-12l12.1
location: complement(join(1717701..1718146,1718224..1718304,1721463..1721558,1722635..1722745,1723683..1723730,1725587..1726120))
location: region:1717701-1726120:-1
so has part: feature:1725587-1726120:-1:exon
so has part: feature:1723683-1723730:-1:exon
so has part: feature:1722635-1722745:-1:exon
so has part: feature:1721463-1721558:-1:exon
so has part: feature:1718224-1718304:-1:exon
so has part: feature:1717701-1718146:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1725587-1726120:-1:exon

position:1725587:-1
position: 1725587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1723683-1723730:-1:exon

position:1723683:-1
position: 1723683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1723730:-1
position: 1723730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1722635-1722745:-1:exon

position:1722635:-1
position: 1722635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1722745:-1
position: 1722745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1721463-1721558:-1:exon

position:1721463:-1
position: 1721463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1721558:-1
position: 1721558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1718224-1718304:-1:exon

position:1718224:-1
position: 1718224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1718304:-1
position: 1718304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1717701-1718146:-1:exon

position:1718146:-1
position: 1718146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

si:dkey-12l12.1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: si:dkey-12l12.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein si:dkey-12l12.1
translation: MGFTIWLLCLQASLLSHALECSAAQGELSVREHTADAQYEDQTQQSALPLPEGLVLFRRRRQLERRGPGHMSHNSLPGAVTAKGFPNTLIQADRSRRHLKKKPRKSRAGTYSLLSNDKRVPLQVIRVRRQEKLDPPKTVNSGRSGAFSVLGDPQADVQADQ
SIO_010081: si:dkey-12l12.1
subclass of: SO_0000673
so part of: si:dkey-12l12.1
location: complement(join(1718111..1718146,1718224..1718304,1721463..1721558,1722635..1722745,1723683..1723730,1725587..1725700))
location: region:1718111-1725700:-1
so has part: feature:1725587-1725700:-1:exon
so has part: feature:1723683-1723730:-1:exon
so has part: feature:1722635-1722745:-1:exon
so has part: feature:1721463-1721558:-1:exon
so has part: feature:1718224-1718304:-1:exon
so has part: feature:1718111-1718146:-1:exon

XP_033964785.1
type: Protein
SIO_000068: ncbiprotein

position:1718111:-1
position: 1718111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1725700:-1
position: 1725700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1725587-1725700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1723683-1723730:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1722635-1722745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1721463-1721558:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1718224-1718304:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1718111-1718146:-1:exon

LOC117465830
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1728824..1729899
location: region:1728824-1729899:1
so has part: feature:1728824-1729899:1:exon
subclass of: SO_0000011

117465830
type: Gene
SIO_000068: ncbigene

position:1728824:1
position: 1728824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1729899:1
position: 1729899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1728824-1729899:1:exon

LOC117465830
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 52239
nc RNA class: lncRNA
gene: LOC117465830
product: uncharacterized LOC117465830
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004554217.1
SIO_010081: LOC117465830
subclass of: SO_0000673
so part of: LOC117465830
location: join(1728824..1729255,1729664..1729728,1729834..1729899)
location: region:1728824-1729899:1
so has part: feature:1728824-1729255:1:exon
so has part: feature:1729664-1729728:1:exon
so has part: feature:1729834-1729899:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1728824-1729255:1:exon

position:1729255:1
position: 1729255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1729664-1729728:1:exon

position:1729664:1
position: 1729664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1729728:1
position: 1729728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1729834-1729899:1:exon

position:1729834:1
position: 1729834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117466017
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466017
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1731279..1736233
location: region:1731279-1736233:1
so has part: feature:1731279-1736233:1:exon
subclass of: SO_0000010

117466017
type: Gene
SIO_000068: ncbigene

position:1731279:1
position: 1731279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1736233:1
position: 1736233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1731279-1736233:1:exon

LOC117466017
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117466017
product: uncharacterized LOC117466017
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034109146.1
SIO_010081: LOC117466017
subclass of: SO_0000673
so part of: LOC117466017
location: join(1731279..1731408,1732058..1732197,1733137..1733273,1733456..1733549,1734448..1734783,1734950..1735136,1735414..1735541,1735711..1736233)
location: region:1731279-1736233:1
so has part: feature:1731279-1731408:1:exon
so has part: feature:1732058-1732197:1:exon
so has part: feature:1733137-1733273:1:exon
so has part: feature:1733456-1733549:1:exon
so has part: feature:1734448-1734783:1:exon
so has part: feature:1734950-1735136:1:exon
so has part: feature:1735414-1735541:1:exon
so has part: feature:1735711-1736233:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1731279-1731408:1:exon

position:1731408:1
position: 1731408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1732058-1732197:1:exon

position:1732058:1
position: 1732058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1732197:1
position: 1732197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1733137-1733273:1:exon

position:1733137:1
position: 1733137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1733273:1
position: 1733273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1733456-1733549:1:exon

position:1733456:1
position: 1733456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1733549:1
position: 1733549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1734448-1734783:1:exon

position:1734448:1
position: 1734448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1734783:1
position: 1734783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1734950-1735136:1:exon

position:1734950:1
position: 1734950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1735136:1
position: 1735136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1735414-1735541:1:exon

position:1735414:1
position: 1735414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1735541:1
position: 1735541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1735711-1736233:1:exon

position:1735711:1
position: 1735711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117466017
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117466017
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117466017
translation: MRLEDETSVEDETGTEVDDYAFPDLLTTSGICFVIKDELNDSGEPSSSPASGTDTISVTSKSSSEIDFYSGTLKRFRKEEEALQGPQAKDLIKQVLLTKPGGSDVMKEYEEKGTISPATRKVMVNILVADMVQSEGRIPQRLTKEKYALGIVTLFPSLQDPHGKTGYEHFYDGQKGGGFLAWRLKSVQRATRLPVRSTDSRIEENGGPMLRREIGHCDDHPDEQRFQELISVMNHTNNREVIMKKMRDTLEYRRRLVHDPERSSTILSVFPRLLDTKGLILQDFSLLFGSETPSKLLEKWPTSFKAKVIQQAEMLTSTPLLKRLLLSAKNQRADEPSLESPEWDSDMASILLLLHLLSPQPAGRKKTQKISVAQAIDHLVVFHKSCRSLDEHLQSHMDTSQPYLLASGTSKEAVGNFFILIDKKLIPCEATTSLAAIDELFKLHFVLGTSYDPALKSMYTFLQTTVYNIDVDTTSESPKVKELRTKFVCNV
SIO_010081: LOC117466017
subclass of: SO_0000673
so part of: LOC117466017
location: join(1731279..1731408,1732058..1732197,1733137..1733273,1733456..1733549,1734448..1734783,1734950..1735136,1735414..1735541,1735711..1736034)
location: region:1731279-1736034:1
so has part: feature:1731279-1731408:1:exon
so has part: feature:1732058-1732197:1:exon
so has part: feature:1733137-1733273:1:exon
so has part: feature:1733456-1733549:1:exon
so has part: feature:1734448-1734783:1:exon
so has part: feature:1734950-1735136:1:exon
so has part: feature:1735414-1735541:1:exon
so has part: feature:1735711-1736034:1:exon

XP_033965037.1
type: Protein
SIO_000068: ncbiprotein

position:1736034:1
position: 1736034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1731279-1731408:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1732058-1732197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1733137-1733273:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1733456-1733549:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1734448-1734783:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1734950-1735136:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1735414-1735541:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1735711-1736034:1:exon

LOC117466018
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117466018
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1811413..1887226)
location: region:1811413-1887226:-1
so has part: feature:1811413-1887226:-1:exon
subclass of: SO_0000010

117466018
type: Gene
SIO_000068: ncbigene

position:1811413:-1
position: 1811413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1887226:-1
position: 1887226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1811413-1887226:-1:exon

LOC117466018
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117466018
product: polycystic kidney disease 1 like 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 28% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034109147.1
SIO_010081: LOC117466018
subclass of: SO_0000673
so part of: LOC117466018
location: complement(join(1811413..1811517,1817070..1817135,1818785..1818925,1819210..1819314,1819435..1819663,1820154..1820293,1820901..1821006,1821089..1821199,1824124..1824242,1824324..1824470,1824959..1825043,1825590..1825915,1827045..1827139,1827528..1827702,1827786..1827959,1828028..1828156,1829966..1830065,1830188..1830294,1854241..1854448,1854887..1854970,1855663..1855861,1856334..1856434,1856896..1857041,1858069..1858182,1859859..1860089,1861373..1861660,1861749..1861805,1862130..1862322,1862844..1863024,1863632..1863752,1864031..1864173,1864845..1864922,1865008..1865187,1866237..1866422,1866554..1866598,1866684..1866881,1866958..1867121,1867731..1867934,1869516..1869697,1870100..1870303,1870802..1870934,1872096..1872335,1875831..1875996,1877390..1877559,1877916..1878044,1878559..1878809,1887014..1887226))
location: region:1811413-1887226:-1
so has part: feature:1887014-1887226:-1:exon
so has part: feature:1878559-1878809:-1:exon
so has part: feature:1877916-1878044:-1:exon
so has part: feature:1877390-1877559:-1:exon
so has part: feature:1875831-1875996:-1:exon
so has part: feature:1872096-1872335:-1:exon
so has part: feature:1870802-1870934:-1:exon
so has part: feature:1870100-1870303:-1:exon
so has part: feature:1869516-1869697:-1:exon
so has part: feature:1867731-1867934:-1:exon
so has part: feature:1866958-1867121:-1:exon
so has part: feature:1866684-1866881:-1:exon
so has part: feature:1866554-1866598:-1:exon
so has part: feature:1866237-1866422:-1:exon
so has part: feature:1865008-1865187:-1:exon
so has part: feature:1864845-1864922:-1:exon
so has part: feature:1864031-1864173:-1:exon
so has part: feature:1863632-1863752:-1:exon
so has part: feature:1862844-1863024:-1:exon
so has part: feature:1862130-1862322:-1:exon
so has part: feature:1861749-1861805:-1:exon
so has part: feature:1861373-1861660:-1:exon
so has part: feature:1859859-1860089:-1:exon
so has part: feature:1858069-1858182:-1:exon
so has part: feature:1856896-1857041:-1:exon
so has part: feature:1856334-1856434:-1:exon
so has part: feature:1855663-1855861:-1:exon
so has part: feature:1854887-1854970:-1:exon
so has part: feature:1854241-1854448:-1:exon
so has part: feature:1830188-1830294:-1:exon
so has part: feature:1829966-1830065:-1:exon
so has part: feature:1828028-1828156:-1:exon
so has part: feature:1827786-1827959:-1:exon
so has part: feature:1827528-1827702:-1:exon
so has part: feature:1827045-1827139:-1:exon
so has part: feature:1825590-1825915:-1:exon
so has part: feature:1824959-1825043:-1:exon
so has part: feature:1824324-1824470:-1:exon
so has part: feature:1824124-1824242:-1:exon
so has part: feature:1821089-1821199:-1:exon
so has part: feature:1820901-1821006:-1:exon
so has part: feature:1820154-1820293:-1:exon
so has part: feature:1819435-1819663:-1:exon
so has part: feature:1819210-1819314:-1:exon
so has part: feature:1818785-1818925:-1:exon
so has part: feature:1817070-1817135:-1:exon
so has part: feature:1811413-1811517:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1887014-1887226:-1:exon

position:1887014:-1
position: 1887014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1878559-1878809:-1:exon

position:1878559:-1
position: 1878559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1878809:-1
position: 1878809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1877916-1878044:-1:exon

position:1877916:-1
position: 1877916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1878044:-1
position: 1878044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1877390-1877559:-1:exon

position:1877390:-1
position: 1877390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1877559:-1
position: 1877559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1875831-1875996:-1:exon

position:1875831:-1
position: 1875831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1875996:-1
position: 1875996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1872096-1872335:-1:exon

position:1872096:-1
position: 1872096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1872335:-1
position: 1872335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1870802-1870934:-1:exon

position:1870802:-1
position: 1870802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1870934:-1
position: 1870934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1870100-1870303:-1:exon

position:1870100:-1
position: 1870100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1870303:-1
position: 1870303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1869516-1869697:-1:exon

position:1869516:-1
position: 1869516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1869697:-1
position: 1869697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1867731-1867934:-1:exon

position:1867731:-1
position: 1867731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1867934:-1
position: 1867934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1866958-1867121:-1:exon

position:1866958:-1
position: 1866958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1867121:-1
position: 1867121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1866684-1866881:-1:exon

position:1866684:-1
position: 1866684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1866881:-1
position: 1866881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1866554-1866598:-1:exon

position:1866554:-1
position: 1866554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1866598:-1
position: 1866598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1866237-1866422:-1:exon

position:1866237:-1
position: 1866237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1866422:-1
position: 1866422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1865008-1865187:-1:exon

position:1865008:-1
position: 1865008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1865187:-1
position: 1865187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1864845-1864922:-1:exon

position:1864845:-1
position: 1864845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1864922:-1
position: 1864922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1864031-1864173:-1:exon

position:1864031:-1
position: 1864031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1864173:-1
position: 1864173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1863632-1863752:-1:exon

position:1863632:-1
position: 1863632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1863752:-1
position: 1863752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1862844-1863024:-1:exon

position:1862844:-1
position: 1862844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1863024:-1
position: 1863024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1862130-1862322:-1:exon

position:1862130:-1
position: 1862130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1862322:-1
position: 1862322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1861749-1861805:-1:exon

position:1861749:-1
position: 1861749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1861805:-1
position: 1861805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1861373-1861660:-1:exon

position:1861373:-1
position: 1861373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1861660:-1
position: 1861660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1859859-1860089:-1:exon

position:1859859:-1
position: 1859859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1860089:-1
position: 1860089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1858069-1858182:-1:exon

position:1858069:-1
position: 1858069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1858182:-1
position: 1858182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1856896-1857041:-1:exon

position:1856896:-1
position: 1856896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1857041:-1
position: 1857041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1856334-1856434:-1:exon

position:1856334:-1
position: 1856334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1856434:-1
position: 1856434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1855663-1855861:-1:exon

position:1855663:-1
position: 1855663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1855861:-1
position: 1855861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1854887-1854970:-1:exon

position:1854887:-1
position: 1854887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1854970:-1
position: 1854970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1854241-1854448:-1:exon

position:1854241:-1
position: 1854241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1854448:-1
position: 1854448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1830188-1830294:-1:exon

position:1830188:-1
position: 1830188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1830294:-1
position: 1830294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1829966-1830065:-1:exon

position:1829966:-1
position: 1829966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1830065:-1
position: 1830065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1828028-1828156:-1:exon

position:1828028:-1
position: 1828028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1828156:-1
position: 1828156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1827786-1827959:-1:exon

position:1827786:-1
position: 1827786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1827959:-1
position: 1827959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1827528-1827702:-1:exon

position:1827528:-1
position: 1827528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1827702:-1
position: 1827702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1827045-1827139:-1:exon

position:1827045:-1
position: 1827045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1827139:-1
position: 1827139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1825590-1825915:-1:exon

position:1825590:-1
position: 1825590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1825915:-1
position: 1825915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1824959-1825043:-1:exon

position:1824959:-1
position: 1824959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1825043:-1
position: 1825043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1824324-1824470:-1:exon

position:1824324:-1
position: 1824324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1824470:-1
position: 1824470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1824124-1824242:-1:exon

position:1824124:-1
position: 1824124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1824242:-1
position: 1824242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1821089-1821199:-1:exon

position:1821089:-1
position: 1821089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1821199:-1
position: 1821199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1820901-1821006:-1:exon

position:1820901:-1
position: 1820901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1821006:-1
position: 1821006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1820154-1820293:-1:exon

position:1820154:-1
position: 1820154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1820293:-1
position: 1820293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1819435-1819663:-1:exon

position:1819435:-1
position: 1819435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1819663:-1
position: 1819663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1819210-1819314:-1:exon

position:1819210:-1
position: 1819210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1819314:-1
position: 1819314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1818785-1818925:-1:exon

position:1818785:-1
position: 1818785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1818925:-1
position: 1818925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:1817070-1817135:-1:exon

position:1817070:-1
position: 1817070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1817135:-1
position: 1817135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1811413-1811517:-1:exon

position:1811517:-1
position: 1811517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117466018
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117466018
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycystic kidney disease 1 like 1-like
translation: MCFIAASIVAYMRRKQRGKQRSLCWGLPGFPCSDPGSEGGMAACVERRGTLGCCNFSFLKSHPNNTSIHDMSVRPAALLLSSCSSCGLLSGSDMFLAFVLSLLSFPRWSAAAQAPDPGSSAWFMGCFTPSSSSLFAPSGRDLNPVTCSVRCLDEGYQVAALTSEACYCGNEQHGLLFGECFNTSADEGTKEVRGGRGSLLSLPVGGDGHVALYRTEGPFQHRVRRSPPADRVHAGKSFVVEVSGNLAGPPTQPIVQIHAAQRVYRTHTDVALLAVSEAADPAQLLWIFGDSTSERTASRNVTKRYRTPGRYDVFVVLWSGRSSASSDVFPLEVQSAVRLNRLLHPASVLQNQALRLSCRVTAGTDVSFLWSFGDGSSRPGLGTEQHVFHRTGEFRVEVTVFNLVSSASLSAHIFVVDRPCQPPPVKNMGPRKLQVRRHEVIRLGVTYETEVDCDISRGLHYTWSLLDSAGRVFSLPLVDTQRQKLKLPSLLLNYDTYTAIARVQVAGSVVYSSYSVKVQVMPSPPVAFIQGGTNIFINNRNNTVVMLDGTKSHDPDFPMNPVSFSWTCKPVSSLPSSCFHDDVPTSSSVLVFPSGFLKHNFDQFQFTLTVHSGERSASSEVFLTFTPNVVGTVPVSCPQCHEEKLNWDQPFSVSAVCEGCDTSAKNIQYTWSLFLVNASSKPAIEVPFCFTVDLSAPSNILEGPSSPRTSTQPTHTVNTSTTASLRENVSIDNKLNLNGTTSGEELVRKKSEPSPISSLNMRTSGSGEEPFYHPLGPLYSSTEYPPLDNSGVLYSDHFTQSGVITPDSSADWEFPFPLLESEDVGDRPGVDGESFGPGDDSEFDLAPHEEEGSNLVDSSPSVGKQEPTLLDVPRHPVDRGLFESYTYTGGSAPLLSLRPFSLAPGSRYMLEVTAQSRSSALGRTQLFFKTNPAPKGVACQVQPIRGVELYTHFSIFCTSGKQDLLYEYSISVGDGPRRTLYAGRDFQYYFSLPSGDPADQYRVTIFTEIRSSSYGTATKPCPVTVEVQPSFFRDDASSSSSSSSSSSSSSSSSSSHPDPDLELSGSGLRNLSALVHLGNSLEVRNHVSLLSGILNRLSLHTEANTHTQRHTRNTLIHTVCELESNGQASMEDNICILKNLLEVTRQVTIASARRVAAHVQDVSQHFPESGGPASYRLEQNTLHSLLSLLSFSLQSSTRADITHMLDPDPREEASRGGGGSISTKQVEHLVADILQAASDLMLKFILMHKVQEHRVSTGLIALYSSYQNRSSTVISSGSSSFSLPPSLIQLVHGSRPRCVLSTLTELRHSPFTWDPCHRRLSGPVVELSLNQCSSRRKIPVRSLTEPIIIQLKQPSNNSSEREYVLLRSRVNHHSFNLTQKHLQQAIQLSVVFTPPSKPFPIMLLFRMFERPTPSMHHLQGIHSWKSNVTHFTLPSSYLSAAGVGHVALLDADFGKRPGAPPLSEQVSYSLSVDSSLCLSWDGQQGAWSPHGCRTQQTDASPDVTCRCHQLRPLTVERQQIHSSHETTHLDPFLSVHRDLTVLLVLLLCLSLSVPALLLSFRADVASETHRRVHYLSDNCPCDPYLYAVTIHTALCSAARMSAKVYMVLKGEDGFSQTRELHVPGCTLFRRNSQDTFIISAADSLGPVWGVHIWHDNSGPSPSWNIKHLDVSEVSRGQLKGRAWLFVAQCWLAVDQSDGWVERILGKCTRGIGFYKTLSLKLSDYLADYHIWISVYSCPCPNAFTHTQRLCVSLLLLLGYACVSTLIISHMDDQLPFQFGCVEATAVSVRTGLLSVCVVLPAAAVISFLFRQKEVERVQHAKSRTTGKDFFQDDFSVSGSISEPHLSWSVLQRWAQDTWRKKYQGTDLPSVSPTIQENKITDKEPEITNLCSLLLINEGDKANQTPPGKEFGTGDGGQEPRSVDGGSSDGSLEEDVPLKGGAFRSRWGLYLAWTLCLLMSLCCLVLSAVLGMRFSSSKVLLWMHSLFFSLVFCIFIIQPAL…
SIO_010081: LOC117466018
subclass of: SO_0000673
so part of: LOC117466018
location: complement(join(1811413..1811517,1817070..1817135,1818785..1818925,1819210..1819314,1819435..1819663,1820154..1820293,1820901..1821006,1821089..1821199,1824124..1824242,1824324..1824470,1824959..1825043,1825590..1825915,1827045..1827139,1827528..1827702,1827786..1827959,1828028..1828156,1829966..1830065,1830188..1830294,1854241..1854448,1854887..1854970,1855663..1855861,1856334..1856434,1856896..1857041,1858069..1858182,1859859..1860089,1861373..1861660,1861749..1861805,1862130..1862322,1862844..1863024,1863632..1863752,1864031..1864173,1864845..1864922,1865008..1865187,1866237..1866422,1866554..1866598,1866684..1866881,1866958..1867121,1867731..1867934,1869516..1869697,1870100..1870303,1870802..1870934,1872096..1872335,1875831..1875996,1877390..1877559,1877916..1878044,1878559..1878809,1887014..1887226))
location: region:1811413-1887226:-1
so has part: feature:1887014-1887226:-1:exon
so has part: feature:1878559-1878809:-1:exon
so has part: feature:1877916-1878044:-1:exon
so has part: feature:1877390-1877559:-1:exon
so has part: feature:1875831-1875996:-1:exon
so has part: feature:1872096-1872335:-1:exon
so has part: feature:1870802-1870934:-1:exon
so has part: feature:1870100-1870303:-1:exon
so has part: feature:1869516-1869697:-1:exon
so has part: feature:1867731-1867934:-1:exon
so has part: feature:1866958-1867121:-1:exon
so has part: feature:1866684-1866881:-1:exon
so has part: feature:1866554-1866598:-1:exon
so has part: feature:1866237-1866422:-1:exon
so has part: feature:1865008-1865187:-1:exon
so has part: feature:1864845-1864922:-1:exon
so has part: feature:1864031-1864173:-1:exon
so has part: feature:1863632-1863752:-1:exon
so has part: feature:1862844-1863024:-1:exon
so has part: feature:1862130-1862322:-1:exon
so has part: feature:1861749-1861805:-1:exon
so has part: feature:1861373-1861660:-1:exon
so has part: feature:1859859-1860089:-1:exon
so has part: feature:1858069-1858182:-1:exon
so has part: feature:1856896-1857041:-1:exon
so has part: feature:1856334-1856434:-1:exon
so has part: feature:1855663-1855861:-1:exon
so has part: feature:1854887-1854970:-1:exon
so has part: feature:1854241-1854448:-1:exon
so has part: feature:1830188-1830294:-1:exon
so has part: feature:1829966-1830065:-1:exon
so has part: feature:1828028-1828156:-1:exon
so has part: feature:1827786-1827959:-1:exon
so has part: feature:1827528-1827702:-1:exon
so has part: feature:1827045-1827139:-1:exon
so has part: feature:1825590-1825915:-1:exon
so has part: feature:1824959-1825043:-1:exon
so has part: feature:1824324-1824470:-1:exon
so has part: feature:1824124-1824242:-1:exon
so has part: feature:1821089-1821199:-1:exon
so has part: feature:1820901-1821006:-1:exon
so has part: feature:1820154-1820293:-1:exon
so has part: feature:1819435-1819663:-1:exon
so has part: feature:1819210-1819314:-1:exon
so has part: feature:1818785-1818925:-1:exon
so has part: feature:1817070-1817135:-1:exon
so has part: feature:1811413-1811517:-1:exon

XP_033965038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1887014-1887226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1878559-1878809:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1877916-1878044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1877390-1877559:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1875831-1875996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1872096-1872335:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1870802-1870934:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1870100-1870303:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1869516-1869697:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1867731-1867934:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1866958-1867121:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1866684-1866881:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1866554-1866598:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1866237-1866422:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1865008-1865187:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1864845-1864922:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1864031-1864173:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1863632-1863752:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1862844-1863024:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1862130-1862322:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1861749-1861805:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1861373-1861660:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1859859-1860089:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1858069-1858182:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1856896-1857041:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1856334-1856434:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1855663-1855861:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1854887-1854970:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1854241-1854448:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1830188-1830294:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1829966-1830065:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1828028-1828156:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1827786-1827959:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1827528-1827702:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1827045-1827139:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1825590-1825915:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1824959-1825043:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1824324-1824470:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1824124-1824242:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1821089-1821199:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1820901-1821006:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1820154-1820293:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1819435-1819663:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1819210-1819314:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1818785-1818925:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1817070-1817135:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1811413-1811517:-1:exon

LOC117465943
type: Gene
subclass of: SO_0000704
RO_0002162: 52239
gene: LOC117465943
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1830625..1833104
location: region:1830625-1833104:1
so has part: feature:1830625-1833104:1:exon
subclass of: SO_0000010

117465943
type: Gene
SIO_000068: ncbigene

position:1830625:1
position: 1830625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1833104:1
position: 1833104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1830625-1833104:1:exon

LOC117465943
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 52239
gene: LOC117465943
product: heavy metal-binding protein HIP-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034109054.1
SIO_010081: LOC117465943
subclass of: SO_0000673
so part of: LOC117465943
location: join(1830625..1830868,1831842..1831907,1832014..1832055,1832280..1832342,1832514..1832642,1832821..1833104)
location: region:1830625-1833104:1
so has part: feature:1830625-1830868:1:exon
so has part: feature:1831842-1831907:1:exon
so has part: feature:1832014-1832055:1:exon
so has part: feature:1832280-1832342:1:exon
so has part: feature:1832514-1832642:1:exon
so has part: feature:1832821-1833104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1830625-1830868:1:exon

position:1830868:1
position: 1830868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1831842-1831907:1:exon

position:1831842:1
position: 1831842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1831907:1
position: 1831907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1832014-1832055:1:exon

position:1832014:1
position: 1832014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1832055:1
position: 1832055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1832280-1832342:1:exon

position:1832280:1
position: 1832280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1832342:1
position: 1832342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1832514-1832642:1:exon

position:1832514:1
position: 1832514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1832642:1
position: 1832642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1832821-1833104:1:exon

position:1832821:1
position: 1832821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117465943
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 52239
gene: LOC117465943
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heavy metal-binding protein HIP-like
translation: MRRAAVFLALLLCLLWTGAQGEEGGGTGKKEGDFDIQAVKAALDQSSSQTQVSTDVWAELKEIRDMAIEHRIKIQRLEQDNTALEARMSSSENEVEEVKRVNADLLARVTASENKSTALEARMSCSEKEVEELQRENADRAQVAFSAGLTDAGSVGPFKTDITLKFSKVFTNIGQAYSPTTGIFTAPVRGVYYFRFNMWESRFSAWSYVRLYHNDRRKMGLHDYRGGSGVVSASNSMVLQLEKGDVVYIDLPSGNSVYDDSMNRMVFSGFLLFPL
SIO_010081: LOC117465943
subclass of: SO_0000673
so part of: LOC117465943
location: join(1830625..1830868,1831842..1831907,1832014..1832055,1832280..1832342,1832514..1832642,1832821..1833104)
location: region:1830625-1833104:1
so has part: feature:1830625-1830868:1:exon
so has part: feature:1831842-1831907:1:exon
so has part: feature:1832014-1832055:1:exon
so has part: feature:1832280-1832342:1:exon
so has part: feature:1832514-1832642:1:exon
so has part: feature:1832821-1833104:1:exon

XP_033964945.1
type: Protein
SIO_000068: ncbiprotein