Planctopirus limnophila DSM 3776 plasmid pPLIM01, complete sequence.
type: Entry
definition: Planctopirus limnophila DSM 3776 plasmid pPLIM01, complete sequence.
sequence version: NC_014149.1
sequence date: 2022-09-25
sequence: sequence
division: CON
label: NC_014149.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02598463
keyword: RefSeq
source: Planctopirus limnophila DSM 3776
organism: Planctopirus limnophila DSM 3776
taxonomy: Bacteria; Planctomycetota; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.
reference: 1
references: 21304691
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001745.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4083246\nSource DNA and organism available from Hans-Peter Klenk at the\nGerman Collection of Microorganisms and Cell Cultures (DSMZ)\n(hans-peter.klenk@dsmz.de)\nContacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)\n David Bruce (microbe@cuba.jgi-psf.org)\nWhole genome sequencing and draft assembly at JGI-PGF\nFinishing done by JGI-LANL\nAnnotation by JGI-ORNL and JGI-PGF\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Metadata-START##\nOrganism Display Name :: Planctomyces limnophilus DSM 3776\nCulture Collection ID :: DSM 3776, ATCC 43296, IFAM 1008\nGOLD Stamp ID :: Gi02301\nFunding Program :: DOE-GEBA 2007\nGene Calling Method :: GeneMark\nIsolation Site :: Surface water\nOxygen Requirement :: Aerobe\nCell Shape :: Sphere-shaped\nMotility :: Motile\nTemperature Range :: Mesophile\nGram Staining :: gram-\nBiotic Relationship :: Free living\nDiseases :: None\nHabitat :: Fresh water, Marine\n##Metadata-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 09/25/2022 09:45:08\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 4,109\nCDSs (total) :: 4,035\…

sequence
subclass of: SO_0000155
sequence length: 37010
topology: circular
so has quality: SO_0000988
location: 1..37010
location: region:1-37010:1
RO_0002162: 521674

NC_014149
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02598463
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Planctomyces limnophilus type strain (Mu 290)
author: Labutti, K.
author: Sikorski, J.
author: Schneider, S.
author: Nolan, M.
author: Lucas, S.
author: Glavina Del Rio, T.
author: Tice, H.
author: Cheng, J.F.
author: Goodwin, L.
author: Pitluck, S.
author: Liolios, K.
author: Ivanova, N.
author: Mavromatis, K.
author: Mikhailova, N.
author: Pati, A.
author: Chen, A.
author: Palaniappan, K.
author: Land, M.
author: Hauser, L.
author: Chang, Y.J.
author: Jeffries, C.D.
author: Tindall, B.J.
author: Rohde, M.
author: Goker, M.
author: Woyke, T.
author: Bristow, J.
author: Eisen, J.A.
author: Markowitz, V.
author: Hugenholtz, P.
author: Kyrpides, N.C.
author: Klenk, H.P.
author: Lapidus, A.
journal: Stand Genomic Sci
volume: 3
issue: 1
pages: 47-56
year: 2010
pubmed: 21304691
comments: Publication Status: Online-Only

21304691
type: PubMed
SIO_000068: pubmed

2
title: The complete plasmid of Planctomyces limnophilus DSM 3776
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Kyrpides, N.
author: Mavromatis, K.
author: Mikhailova, N.
author: Ovchinnikova, G.
author: LaButti, K.
author: Clum, A.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Markowitz, V.
author: Cheng, J.-F.
author: Hugenholtz, P.
author: Woyke, T.
author: Wu, D.
author: Tindal, B.
author: Klenk, H.-P.
author: Eisen, J.A.
journal: Unpublished

3
title: Direct Submission
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Kyrpides, N.
author: Mavromatis, K.
author: Mikhailova, N.
author: Ovchinnikova, G.
author: LaButti, K.
author: Clum, A.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Markowitz, V.
author: Cheng, J.-F.
author: Hugenholtz, P.
author: Woyke, T.
author: Wu, D.
author: Tindal, B.
author: Klenk, H.-P.
author: Eisen, J.A.
journal: Submitted (09-SEP-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37010:1
position: 37010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-37010:1:source
so part of: sequence
organism: Planctopirus limnophila DSM 3776
mol type: genomic DNA
strain: DSM 3776
isolation source: surface water
culture collection: DSM:3776, ATCC 43296, IFAM 1008
type material: type strain of Planctopirus limnophila
plasmid: pPLIM01

521674
type: Taxonomy
SIO_000068: taxonomy

PLIM_RS21795
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21795
old locus tag: Plim_4245
so part of: sequence
location: 21..1133
location: region:21-1133:1
so has part: feature:21-1133:1:exon
subclass of: SO_0000010

position:21:1
position: 21
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1133:1
position: 1133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21-1133:1:exon

PLIM_RS21795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21795
old locus tag: Plim_4245
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKFILSFLATLWANQKVRSIVKSGGLTLTGIAAAALAGSLVNLDTRWIVAVTAVTPFLINVLLKMYPSDGDDTNGDSLNDYVQIAIKKWLEGLDSGKVSIDDARKLNSWIDDLFKKTPMILLCGLPFLLAGCDYSGPTQAPRVVISGPTTGVPGELLLLDASATENSPQHFRWTISPALPGRQQLIVQDGGKRCFVAGYPGSFVVTCSASNRAGVDTLTHAITTPGTPPGPPPAPIVPKPDPTPNITPQPKPEPPTPPAPAPEPIAKTFGIGPAITDVARSINSPDRSGTCRRLASEARRVAEDKNLKTQAAILTAAMKPIGALGSEWQPLKDLLKSQITKLYGDGKLVTNDDYIALLNEVAKALDAAA
SIO_010081: PLIM_RS21795
subclass of: SO_0000673
so part of: PLIM_RS21795
location: 21..1133
location: region:21-1133:1
so has part: feature:21-1133:1:exon

WP_013112483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21-1133:1:exon

PLIM_RS21800
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21800
old locus tag: Plim_4246
so part of: sequence
location: 1184..2218
location: region:1184-2218:1
so has part: feature:1184-2218:1:exon
subclass of: SO_0000010

position:1184:1
position: 1184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2218:1
position: 2218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184-2218:1:exon

PLIM_RS21800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21800
old locus tag: Plim_4246
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPVWLIRLIITLIISSLLCVAVGAIGLLMPGTPPVNYGLAAGWRESFAEVLRETPRSFSDVIGESSDAASKDVRLYRAALFVESPAKPFGQQFRTINQGTGDCVAQGVRTALRTTMSVKAAKGERKVVEPFAPYIFGTTRKLVSRWPCGAAGADPSAAMVAFEQYGIVTEEEAGVPYSGALANRWACTGPPDALLKIGKQRAGSSFPIRSAEELCQAINNGYACTWATGMKPARYEERDGRWVVTRWGGWAHQMAITDFDGSRSSDLSRKYFNVWNSHSEDPRISGHPLPLGDEPPGSFWMTWKDIDRFIKSGDSVVYAISDVQGFEADDVGSLLKNLFQESAR
SIO_010081: PLIM_RS21800
subclass of: SO_0000673
so part of: PLIM_RS21800
location: 1184..2218
location: region:1184-2218:1
so has part: feature:1184-2218:1:exon

WP_013112484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1184-2218:1:exon

PLIM_RS21805
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21805
old locus tag: Plim_4247
so part of: sequence
location: 2215..2622
location: region:2215-2622:1
so has part: feature:2215-2622:1:exon
subclass of: SO_0000010

position:2215:1
position: 2215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2622:1
position: 2622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2215-2622:1:exon

PLIM_RS21805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21805
old locus tag: Plim_4247
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNGNKLCFWLLVLAGTAILFAVAHYTEANDRSPLAALDCLECGHGEDVLAALDTLNRPVSSQPVIDRQELDSVLSMLDAPRASKPTPGTPPVNAAKPNPVTPPPPPVVPQYLRQPVLNQPQLKLRCTRNGCVWTY
SIO_010081: PLIM_RS21805
subclass of: SO_0000673
so part of: PLIM_RS21805
location: 2215..2622
location: region:2215-2622:1
so has part: feature:2215-2622:1:exon

WP_013112485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2215-2622:1:exon

PLIM_RS23800
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS23800
old locus tag: Plim_4248
so part of: sequence
location: 2648..2950
location: region:2648-2950:1
so has part: feature:2648-2950:1:exon
subclass of: SO_0000010

position:2648:1
position: 2648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2950:1
position: 2950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2648-2950:1:exon

PLIM_RS23800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS23800
old locus tag: Plim_4248
inference: COORDINATES: protein motif:HMM:NF013964.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH endonuclease signature motif containing protein
translation: MPNKPPTFRAPAPKRREQRPSSHQRGYTRQWSAYRKRFLSQHPLCVMCLGKGRSVPATEVDHIIAHGGNQSLFWAASNHQPLCKSHHSAKTVAEDGGFGR
SIO_010081: PLIM_RS23800
subclass of: SO_0000673
so part of: PLIM_RS23800
location: 2648..2950
location: region:2648-2950:1
so has part: feature:2648-2950:1:exon

WP_013112486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2648-2950:1:exon

PLIM_RS21815
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21815
old locus tag: Plim_4250
so part of: sequence
location: 3521..5182
location: region:3521-5182:1
so has part: feature:3521-5182:1:exon
subclass of: SO_0000010

position:3521:1
position: 3521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5182:1
position: 5182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3521-5182:1:exon

PLIM_RS21815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21815
old locus tag: Plim_4250
inference: COORDINATES: protein motif:HMM:NF015321.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: terminase large subunit
translation: MKDRIKRLEGLLGSERPKGKLEKACIKRQIDDLKHGHKRGLVWNEDEAQRAIDFYQFLCHWKGEWAGKPLDLELWQQELIIAPIFGWYLQDGSRRFRTGYIEIPRKNGKTTIAAGIALRGLTADLESGAEVYCAATKRDQAKLLFRDATNFIRKAEYLKRRLKIQKHALLCPKLSSSLVPLSSDANTLDGLNPHMTVVDELHAHRTRDLWDVMATASGSRNRSLLLAITTAGHDRTSVCWEQRDYSQKLLTGSIEDDSYFCFIACADEKDDPFDPMTWWKANPNLDISLKRTFIENQARKAKASPSYENTFRRLHLNQWTEAETRWLKMSDWAKAAEEFDLSWLVGERCFAGLDLSKVNDTSALVLVTEIDGDWYLVPWFWIPGDNAFRREAEHQVPYTVWQRSGHIHFTDGDVVDYSWIGKTLMEIAGTVQLEGVAYDPYNASHFAQQMIGEGLPMVEFPQSWRNLADATSEFEKLLVSGNLHHNNNPVFNWQAGNVSVRRNPSGQIRPAKPMSEDAKKIDGIAAAIMGLALATRSQQASPSVYETRGFVTL
SIO_010081: PLIM_RS21815
subclass of: SO_0000673
so part of: PLIM_RS21815
location: 3521..5182
location: region:3521-5182:1
so has part: feature:3521-5182:1:exon

WP_196349588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3521-5182:1:exon

PLIM_RS23470
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS23470
old locus tag: Plim_4251
so part of: sequence
location: 5179..6813
location: region:5179-6813:1
so has part: feature:5179-6813:1:exon
subclass of: SO_0000010

position:5179:1
position: 5179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6813:1
position: 6813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5179-6813:1:exon

PLIM_RS23470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS23470
old locus tag: Plim_4251
inference: COORDINATES: protein motif:HMM:TIGR01537.1
GO component: GO:0044423 - virion component [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0019068 - virion assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage portal protein
translation: MNPFNFAVNTSQVTNTEVTGNPENPAVPLDPDAWEDLGWLGRMTDAGVRVNHENCIGHPPLWRAVNLIAGDVAKLPLNVYRRTQGGHERDKDHHANWLLRHKVNDYILSYVFKKTLTFHSLLHGQGFAYIHREGTVPKQLVPLNPETTEPVVIGGNLFYGVTINGNKRRLHATDVLHIKGISFDGIEGIDVIQVMAQALALGIAAQKYGAKFFGSGAKAGGILMLPPGLKPSARKQREEEWKKEQEGLDNAFKSMLLEDGAKWIQNTITPEQGQFLQTRQFEAIQVANVLGVPPHKIGDNGKVSYNSLEQENKSYLQDCLDHWLVMWEQECWDKLLTENEKRNDTHFVEFNRSALQRTDEKTEVESLERQVNCGMLLLNEARAIRNLPPVEGGDRPRMPSNIIFTDAKQLEAKPAAATNAGERIAQSIQNALNDRIDRLLEVEQAVRSKANCSIDLLTQHGRKLASAVIPVLDIYAASQGKILDADKTTAAIVADCVSYQAAENWHTSRRNHLATFLKGLVNGSHPEETGRAAGEAEQAGETQP
SIO_010081: PLIM_RS23470
subclass of: SO_0000673
so part of: PLIM_RS23470
location: 5179..6813
location: region:5179-6813:1
so has part: feature:5179-6813:1:exon

WP_013112489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5179-6813:1:exon

PLIM_RS21830
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21830
old locus tag: Plim_4252
so part of: sequence
location: 6743..7429
location: region:6743-7429:1
so has part: feature:6743-7429:1:exon
subclass of: SO_0000010

position:6743:1
position: 6743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7429:1
position: 7429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6743-7429:1:exon

PLIM_RS21830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21830
old locus tag: Plim_4252
inference: COORDINATES: protein motif:HMM:NF012783.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Clp protease ClpP
translation: MDPILKKLEELRAKQNKLAKPSRKNAGENEIYVYDVIGPADWGYFGAATMKDELKNLGSDVTEVVIRINSVGGYVGEASAIYQLLKEHPANIHVKIDGEAISCASWIAMAGDKITIAEHGLMMVHDPSTWISGTADDLRKEAEVLDSYKEVIAGIYAARSGTDVEDVKKMMSDETWMTATQAKDKGFVDEISANKSKPEATNFKAVHIANWQMENIRRRQQLIEAANA
SIO_010081: PLIM_RS21830
subclass of: SO_0000673
so part of: PLIM_RS21830
location: 6743..7429
location: region:6743-7429:1
so has part: feature:6743-7429:1:exon

WP_148227395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6743-7429:1:exon

PLIM_RS23475
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS23475
old locus tag: Plim_4253
so part of: sequence
location: 7597..8910
location: region:7597-8910:1
so has part: feature:7597-8910:1:exon
subclass of: SO_0000010

position:7597:1
position: 7597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8910:1
position: 8910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7597-8910:1:exon

PLIM_RS23475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS23475
old locus tag: Plim_4253
inference: COORDINATES: protein motif:HMM:TIGR01554.2
GO component: GO:0044423 - virion component [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0019068 - virion assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage major capsid protein
translation: MTMKELQEKRNNLIAESRKILDKADSEKRVMDSAEKAQWDKMNAEISELGAHMRRMNRQKKNEARTKELLENNDLGPSQVGNRNNRKPGNEPVNFNDLVSGWVRMATGRRITNAQKKALQNRSAKINGREAYIPLHKNFNEVKRAVNVLTTGTGSSGGYTIPEGFIAALEVAMLTFDPVSAVADVWRTSAGNPTPWPTGSDTANSGEQLGESTSFGASVDPTMGVVLFGAYKFSSKPIMVPYELLEDTGVNLTQQLGTWLGERLGRIKALRNTLGNGTTQPQGIVTGSVLGHTAADDVTISFDDVIRLEHSVPRAYRMNAGYMCNDAVSLALRLLKDSQGRYLWQASANAGMPDLLNNRPLTINDNMTGTIAASAKTMLCGDFSKFKIREVGTIRLKRLQERYAELDQEAFIGFERMDSKVLDAGAGPIRHLIQAAS
SIO_010081: PLIM_RS23475
subclass of: SO_0000673
so part of: PLIM_RS23475
location: 7597..8910
location: region:7597-8910:1
so has part: feature:7597-8910:1:exon

WP_196349589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7597-8910:1:exon

PLIM_RS21840
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21840
old locus tag: Plim_4254
so part of: sequence
location: 9043..9348
location: region:9043-9348:1
so has part: feature:9043-9348:1:exon
subclass of: SO_0000010

position:9043:1
position: 9043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9348:1
position: 9348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9043-9348:1:exon

PLIM_RS21840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21840
old locus tag: Plim_4254
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQEEQLFSVKLTSSRAGNGVAHEKGDVIDVPLARAHRLITAGQAKYVGEGKLPPYTPPAPVHVPGPAAPENDEDDSDADDGGEEIANTEGKSKLRSRKAAK
SIO_010081: PLIM_RS21840
subclass of: SO_0000673
so part of: PLIM_RS21840
location: 9043..9348
location: region:9043-9348:1
so has part: feature:9043-9348:1:exon

WP_013112492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9043-9348:1:exon

PLIM_RS21845
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21845
old locus tag: Plim_4255
so part of: sequence
location: 9395..9982
location: region:9395-9982:1
so has part: feature:9395-9982:1:exon
subclass of: SO_0000010

position:9395:1
position: 9395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9982:1
position: 9982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9395-9982:1:exon

PLIM_RS21845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21845
old locus tag: Plim_4255
inference: COORDINATES: protein motif:HMM:TIGR02215.1
GO process: GO:0016032 - viral process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: head-tail connector protein
translation: MKHHLTHGRVVTTIAPADEPITLADLKRQIRVDTSDEDDQLTAYIKAARELLEEHTERALVTQTRQLYLDRFPSCQTIEIPCTPVTSIESIEYIDPTGQLQELDPSSYVADLVSSPARIRPAYGRFWPAIRYQMNAVIVTFEAGQDVDEVPERAKQAIRLLAGHWYANRETVLIGTISKEVEFSFNALAGQLRWH
SIO_010081: PLIM_RS21845
subclass of: SO_0000673
so part of: PLIM_RS21845
location: 9395..9982
location: region:9395-9982:1
so has part: feature:9395-9982:1:exon

WP_013112493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9395-9982:1:exon

PLIM_RS21850
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21850
old locus tag: Plim_4256
so part of: sequence
location: 9982..10317
location: region:9982-10317:1
so has part: feature:9982-10317:1:exon
subclass of: SO_0000010

position:10317:1
position: 10317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9982-10317:1:exon

PLIM_RS21850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21850
old locus tag: Plim_4256
inference: COORDINATES: protein motif:HMM:TIGR01563.1
GO component: GO:0044423 - virion component [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0019068 - virion assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage head closure protein
translation: MAPAGKYRDRVRFESFTATPDASGQLVETWQTLGTFWAEVNAVSGSESFRGRKIQGRVSHLVRVRVNSLTRQITNRHRMIIHGQIVSIASVYDPNNRGIEIEVQGEELLDS
SIO_010081: PLIM_RS21850
subclass of: SO_0000673
so part of: PLIM_RS21850
location: 9982..10317
location: region:9982-10317:1
so has part: feature:9982-10317:1:exon

WP_013112494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9982-10317:1:exon

PLIM_RS21855
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21855
old locus tag: Plim_4257
so part of: sequence
location: 10314..10949
location: region:10314-10949:1
so has part: feature:10314-10949:1:exon
subclass of: SO_0000010

position:10314:1
position: 10314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10949:1
position: 10949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10314-10949:1:exon

PLIM_RS21855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21855
old locus tag: Plim_4257
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAAAALGRQLLLELSGDRQLLKTFDRLSTTAQAKAARRGLAAGLKVVTKAQKNAVPSVKTKGHSTKRLKAGIRGRQMRVKKANLYEAKSGVNVGKRSRRSKYSQAKGNLSRAPHLHLFVLGTQPRFTGSTSRKVRGQSTGTRKDGTAFVRGKHKPGTIIRKQTGKPKRFRGRMPGSSFLNFAQATSLSATQSAVIDAMRQAILTEATKGK
SIO_010081: PLIM_RS21855
subclass of: SO_0000673
so part of: PLIM_RS21855
location: 10314..10949
location: region:10314-10949:1
so has part: feature:10314-10949:1:exon

WP_013112495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10314-10949:1:exon

PLIM_RS21860
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21860
old locus tag: Plim_4258
so part of: sequence
location: 10951..11379
location: region:10951-11379:1
so has part: feature:10951-11379:1:exon
subclass of: SO_0000010

position:10951:1
position: 10951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11379:1
position: 11379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10951-11379:1:exon

PLIM_RS21860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21860
old locus tag: Plim_4258
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF3168 domain-containing protein
translation: MSIEAAMRGVLVAATGVANIVATNSTSNDKAIRPERLAQTDSYPAIEIQITSETHQEDLGGWDGTSDVEVTLFCVAETAQQAAALVKAVRQTLTSISNVSSVHGRIESVVLTDTEGSYEPEADGSDEGVYVKALSCSVWFVE
SIO_010081: PLIM_RS21860
subclass of: SO_0000673
so part of: PLIM_RS21860
location: 10951..11379
location: region:10951-11379:1
so has part: feature:10951-11379:1:exon

WP_013112496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10951-11379:1:exon

PLIM_RS21865
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21865
old locus tag: Plim_4259
so part of: sequence
location: 11387..11800
location: region:11387-11800:1
so has part: feature:11387-11800:1:exon
subclass of: SO_0000010

position:11387:1
position: 11387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11800:1
position: 11800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11387-11800:1:exon

PLIM_RS21865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21865
old locus tag: Plim_4259
inference: COORDINATES: protein motif:HMM:NF027776.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail tube protein
translation: MSNKVASKGTKLQLSVASVYTDIGGVSKIDYPDREVEHWDATDLDSDEREDGELTGLVTPGMISGELFYDPDDELHQELEDLLATPTYRDWRIRKGTRVVTVNGSLKKFQPSSAVGDGMKATFEIKCRTKPVISTVA
SIO_010081: PLIM_RS21865
subclass of: SO_0000673
so part of: PLIM_RS21865
location: 11387..11800
location: region:11387-11800:1
so has part: feature:11387-11800:1:exon

WP_013112497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11387-11800:1:exon

PLIM_RS21870
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21870
old locus tag: Plim_4260
so part of: sequence
location: 11873..12172
location: region:11873-12172:1
so has part: feature:11873-12172:1:exon
subclass of: SO_0000010

position:11873:1
position: 11873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12172:1
position: 12172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11873-12172:1:exon

PLIM_RS21870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21870
old locus tag: Plim_4260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAKLIRDADGPNPDFDPKQKVSATNQPHVVIPKGTIIEGEKAFRLCQGSNPVAEPEDDDCKAVIAEYRKKRVAIHQQRAAERVAEKAAEKAETSRKGR
SIO_010081: PLIM_RS21870
subclass of: SO_0000673
so part of: PLIM_RS21870
location: 11873..12172
location: region:11873-12172:1
so has part: feature:11873-12172:1:exon

WP_013112498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11873-12172:1:exon

PLIM_RS21875
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21875
old locus tag: Plim_4261
so part of: sequence
location: 12215..12634
location: region:12215-12634:1
so has part: feature:12215-12634:1:exon
subclass of: SO_0000010

position:12215:1
position: 12215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12634:1
position: 12634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12215-12634:1:exon

PLIM_RS21875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21875
old locus tag: Plim_4261
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKPAMTEKAKPVKLLTADLLKRPAQRVIVKCRVPDDFHDPDIAGSIFFVRRMKAGERGRYEMQFKNSKSGQLISGRAAEVRERLIIQTLCDREGNLLLGKDDLQQLKQMDSVLADLIVNKAQEVNQVSEEDLEELAGN
SIO_010081: PLIM_RS21875
subclass of: SO_0000673
so part of: PLIM_RS21875
location: 12215..12634
location: region:12215-12634:1
so has part: feature:12215-12634:1:exon

WP_013112499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12215-12634:1:exon

PLIM_RS21880
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21880
old locus tag: Plim_4262
so part of: sequence
location: 12652..12990
location: region:12652-12990:1
so has part: feature:12652-12990:1:exon
subclass of: SO_0000010

position:12652:1
position: 12652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12990:1
position: 12990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12652-12990:1:exon

PLIM_RS21880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21880
old locus tag: Plim_4262
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFAMRLALAMRRVDVDAMLDEMEPEDLREWQAFASIDPFDEERADLRNGILIANLGAMLAPFCGSHLAELRPVQFMPFSQQSDVISTEISEEQERLNWANLEAAVAMMSDSK
SIO_010081: PLIM_RS21880
subclass of: SO_0000673
so part of: PLIM_RS21880
location: 12652..12990
location: region:12652-12990:1
so has part: feature:12652-12990:1:exon

WP_013112500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12652-12990:1:exon

PLIM_RS21885
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21885
old locus tag: Plim_4263
so part of: sequence
location: 13020..14723
location: region:13020-14723:1
so has part: feature:13020-14723:1:exon
subclass of: SO_0000010

position:13020:1
position: 13020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14723:1
position: 14723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13020-14723:1:exon

PLIM_RS21885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21885
old locus tag: Plim_4263
inference: COORDINATES: protein motif:HMM:NF040129.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tape measure protein
translation: MTKLVSNTAGFGPPIKAAGRDVSQFAGIVEGTRSRLGGLVAAGAGALGITSLAGALGFGIKLAADAEQAEVAFGTLFQSTDKAKAMLGQLNQFAAETPFESPELVSAARMLASFGTQAGDIVPNLRRIGDVAAGTGQPIAELAELYGKAKVQGRLMGEDINQLTGRGIPIIGQLAKQFGVAESEVKKLVEQGKVGFPQLEQAFIDMTSNGGMFAGMMQAQSQTLTGMTSTLMDNAKGLLRSFGAEVIAAFDLKGGLASGIEFIASLQSGFDTIRPLIQQTGNVWRAFVGFMGAGWSGLMGEITSSTGSTFGGITNWIMEALVMGEFLFQNFGDVIYRTFIAAQLSAVTFFNEMVHFFSVAIPEYIRWFGDNFPEIFMTAADTVLTVLINLGENIRNIFSEIWKFISSGGSDGLNFDLKPLTEGIHNSIREMPNVPERVVSETEAALQSQLNDMDQQLGQRYGELDRQRANAMQAQSAATAELLPSDPANPAAAGAAANKNAKAALGASAFAGTQEAYAIIAKASAGPQKKLEAEAKKTNEQLKQAVTHLGTIAESVSQPVTQDVVDF
SIO_010081: PLIM_RS21885
subclass of: SO_0000673
so part of: PLIM_RS21885
location: 13020..14723
location: region:13020-14723:1
so has part: feature:13020-14723:1:exon

WP_196349590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13020-14723:1:exon

PLIM_RS21890
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21890
old locus tag: Plim_4264
so part of: sequence
location: 14723..15616
location: region:14723-15616:1
so has part: feature:14723-15616:1:exon
subclass of: SO_0000010

position:15616:1
position: 15616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14723-15616:1:exon

PLIM_RS21890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21890
old locus tag: Plim_4264
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASIVDVERLFGRGFDVTIDPSSKVTRNYKRKLRLRVDENLDPDQVANLYGVEQFYTHPRDPFAFLRKLSCTDVPDKIDPWVYELNLEYSTDQPDLQEQPPKEPGESDDPLLDPMEIEWQSEETQTIKFRDRDNRPFLNTAGDVIESPPPIPDSTLKLVVTRNEAYYDPARARFFGNTINQHAFYGCEPGQLRLHPFGSKQSRRNGRIYWPHTYIMEFKQDGWQPKQISAGYRELVDGQLTRIKDPETRNDVSEPIPLDADGRAIPAEDLKANPDLAVYIEFTGFRETDFAQLGLNL
SIO_010081: PLIM_RS21890
subclass of: SO_0000673
so part of: PLIM_RS21890
location: 14723..15616
location: region:14723-15616:1
so has part: feature:14723-15616:1:exon

WP_013112502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14723-15616:1:exon

PLIM_RS21895
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21895
old locus tag: Plim_4265
so part of: sequence
location: 15650..17374
location: region:15650-17374:1
so has part: feature:15650-17374:1:exon
subclass of: SO_0000010

position:15650:1
position: 15650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17374:1
position: 17374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15650-17374:1:exon

PLIM_RS21895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21895
old locus tag: Plim_4265
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVKVADRVLETTNTTGTGSFQLLGTQTGFVRFRDGGILTGEQVYYVAEHPTLDEWEVGVGTLTTGTPDVLARVQILSSSNAGSAVSFSPGRKRIRCTLPAEALEDYGDLLGQINSHASRHKHGGADEVATATPAANAIPKAGAGGSLADGWIPSLAISKTTGLQAALDAKAALSHNHGDADLIALDAAKLTGTIDPARLPVLPSSVQIVSSGGIADLTSPQQAEIGDGSIVTTTDGRRWVYTGSGSKTSEASYIELADLTPEWSVIANKPAILTAIDALSAAGIIARTGAGTVAARTITQGTGVTVTNGDGVSGNPTIAIGQAVATTSDVTFNTLTTTSTANVQGSMRVGSAGAVGNASYMMQVVQNAASTRNFVVENSSGTHNAGFVVIAGSRNMSFTQTPSGASGMTVTGGGDLLFNIGSADRHYMQAAGSFRDFGISSTPSGVSGWATRWADTSGNWYTRAGTGSIYRLGAQGLFAITYGATITPDANNGPVQSCTLTGAVTVAAPTNMSSGDFLNLVLIQDGTGGRAVTLSAFSLTSNSAAIDTTANKRQEIQIRRDGSIYRAHVLGSY
SIO_010081: PLIM_RS21895
subclass of: SO_0000673
so part of: PLIM_RS21895
location: 15650..17374
location: region:15650-17374:1
so has part: feature:15650-17374:1:exon

WP_013112503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15650-17374:1:exon

PLIM_RS21900
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21900
old locus tag: Plim_4266
so part of: sequence
location: 17378..17734
location: region:17378-17734:1
so has part: feature:17378-17734:1:exon
subclass of: SO_0000010

position:17378:1
position: 17378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17734:1
position: 17734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17378-17734:1:exon

PLIM_RS21900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21900
old locus tag: Plim_4266
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLAQLNFPNPLDPTGSYPNAFCWADEFCNFTQERRLSAVFKIYASPEAYFTGKPPVASRSITVEGQDYLDLLAANAAAFTSLGDLLSTHAKESVPEFSAAVQVPTTLPTTLDPRQLPE
SIO_010081: PLIM_RS21900
subclass of: SO_0000673
so part of: PLIM_RS21900
location: 17378..17734
location: region:17378-17734:1
so has part: feature:17378-17734:1:exon

WP_013112504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17378-17734:1:exon

PLIM_RS21905
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21905
old locus tag: Plim_4267
so part of: sequence
location: 17731..17955
location: region:17731-17955:1
so has part: feature:17731-17955:1:exon
subclass of: SO_0000010

position:17731:1
position: 17731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17955:1
position: 17955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17731-17955:1:exon

PLIM_RS21905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21905
old locus tag: Plim_4267
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDHEFTIYIRNLEAQRNTAMNANAELSARLSSAVHRLQQLEAANADLTARLQACEPASESNEPVASTEEVPQP
SIO_010081: PLIM_RS21905
subclass of: SO_0000673
so part of: PLIM_RS21905
location: 17731..17955
location: region:17731-17955:1
so has part: feature:17731-17955:1:exon

WP_013112505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17731-17955:1:exon

PLIM_RS24470
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS24470
old locus tag: Plim_4268
so part of: sequence
location: 17955..18122
location: region:17955-18122:1
so has part: feature:17955-18122:1:exon
subclass of: SO_0000010

position:18122:1
position: 18122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17955-18122:1:exon

PLIM_RS24470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS24470
old locus tag: Plim_4268
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLGNESMCEVSVGERVPRVPEVAAKLADITETLTFPVTEFDERNTIQGSIIEQPG
SIO_010081: PLIM_RS24470
subclass of: SO_0000673
so part of: PLIM_RS24470
location: 17955..18122
location: region:17955-18122:1
so has part: feature:17955-18122:1:exon

WP_013112506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17955-18122:1:exon

PLIM_RS21910
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21910
old locus tag: Plim_4269
so part of: sequence
location: 18131..18652
location: region:18131-18652:1
so has part: feature:18131-18652:1:exon
subclass of: SO_0000010

position:18131:1
position: 18131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18652:1
position: 18652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18131-18652:1:exon

PLIM_RS21910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21910
old locus tag: Plim_4269
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPGVIYLDNDLDVVVRGLRLAEDNSPINDAELYVALGRKLISGEITAATNATPIVITSAGHGLSNGDSVVIMNVEGNLAANGGWEVANVTTNTFELVGSVGSAAYEASGVWYAGVTDAIHIPLESEPGEAGHYRGTIPGSVNINRGEMLVELIYCRNYQLGWQRELQGRIRTR
SIO_010081: PLIM_RS21910
subclass of: SO_0000673
so part of: PLIM_RS21910
location: 18131..18652
location: region:18131-18652:1
so has part: feature:18131-18652:1:exon

WP_013112507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18131-18652:1:exon

PLIM_RS21915
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21915
old locus tag: Plim_4270
so part of: sequence
location: 18649..19029
location: region:18649-19029:1
so has part: feature:18649-19029:1:exon
subclass of: SO_0000010

position:18649:1
position: 18649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19029:1
position: 19029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18649-19029:1:exon

PLIM_RS21915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21915
old locus tag: Plim_4270
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAVMFSQGAARKIRTATERVLGKGPPPPINSTRPSPLRPENRYMGKFVTSLEAPEIDPEIDRIVPTSATFQVWLPDPEQPDVQLIPTDIEMLVYNFDPSLTAEPDIFGKIEYLNGVWSPYWASCE
SIO_010081: PLIM_RS21915
subclass of: SO_0000673
so part of: PLIM_RS21915
location: 18649..19029
location: region:18649-19029:1
so has part: feature:18649-19029:1:exon

WP_013112508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18649-19029:1:exon

PLIM_RS21920
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21920
old locus tag: Plim_4271
so part of: sequence
location: 19042..20178
location: region:19042-20178:1
so has part: feature:19042-20178:1:exon
subclass of: SO_0000010

position:19042:1
position: 19042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20178:1
position: 20178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19042-20178:1:exon

PLIM_RS21920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21920
old locus tag: Plim_4271
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGRPCACCGCRCTLEERNANVMEETDLVTFPASITGSTITTAGNEEDGSPFTYKCSNTLSPTNHPPSRVWTHEYETGAIYNGALYASFPSTITADLDGSGFTRGPVIDLEFLASTGVLIPSSWVRFDGFSFGFPTYTATSQFVYGGTPTAIVAGQFFPEPFVPDGHSRLIDIRWDQAESRHISRTYDDEPLVENFRWLYSQFYSFNFTTGLYETSGSMTSTNTYSPTLIESDVTDFFNELRPLVKQGDQIGYFGAGPTIHATSGIWSRLSVSNVLSGTVIRPKATPTVGTDFLGAWENFTLDLTEGAEPIYFGLGYFRIAPTPKPFVTVDIGPPSGGGPYGADTFTLNYYLDHVVEPWTFTDNFEWDSVCVKLLPSDV
SIO_010081: PLIM_RS21920
subclass of: SO_0000673
so part of: PLIM_RS21920
location: 19042..20178
location: region:19042-20178:1
so has part: feature:19042-20178:1:exon

WP_013112509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19042-20178:1:exon

PLIM_RS21925
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21925
old locus tag: Plim_4272
so part of: sequence
location: 20215..21066
location: region:20215-21066:1
so has part: feature:20215-21066:1:exon
subclass of: SO_0000010

position:20215:1
position: 20215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21066:1
position: 21066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20215-21066:1:exon

PLIM_RS21925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21925
old locus tag: Plim_4272
inference: COORDINATES: protein motif:HMM:NF012798.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MLLAEAIDQFLNHVLATRKPATERHYRERLQGLRKLHGTSSIDSLTTSSIEQHFAQANHWPDGRPKAPDTIRANIIAWEQLQAFLLQEQLIPQALTGAIAKPSGQLRERLPTKDEIARILAAAVPAFALIYRALRLSGCRPSELAKATFADWDQREGVISLADHKTATKSKRPRRIAVGDKLLEYLRLAIGDRTEGPLFLTSQGKPWTSARLSQEFRRTRERAGLSKDLVLYLTRHEHATQLCEKLDLNAAAEALGHASLNTTRRYLHLSAKKLKANQDLFEE
SIO_010081: PLIM_RS21925
subclass of: SO_0000673
so part of: PLIM_RS21925
location: 20215..21066
location: region:20215-21066:1
so has part: feature:20215-21066:1:exon

WP_013112510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20215-21066:1:exon

PLIM_RS24475
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS24475
so part of: sequence
location: complement(21116..21325)
location: region:21116-21325:-1
so has part: feature:21116-21325:-1:exon
subclass of: SO_0000010

position:21116:-1
position: 21116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21325:-1
position: 21325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21116-21325:-1:exon

PLIM_RS24475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS24475
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFPLLTKLLVIQKAILMFLLFIASISYGQSNEERDNDQYDSDRYRACFNWPTIHRAHPQPTADPEGYKQ
SIO_010081: PLIM_RS24475
subclass of: SO_0000673
so part of: PLIM_RS24475
location: complement(21116..21325)
location: region:21116-21325:-1
so has part: feature:21116-21325:-1:exon

WP_196349587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21116-21325:-1:exon

PLIM_RS24915
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS24915
old locus tag: Plim_4274
so part of: sequence
location: 21502..21636
location: region:21502-21636:1
so has part: feature:21502-21636:1:exon
subclass of: SO_0000010

position:21502:1
position: 21502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21636:1
position: 21636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21502-21636:1:exon

PLIM_RS24915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS24915
old locus tag: Plim_4274
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQRYPCAQNVGKSAGPGGLPRGPPEKIDRLAVVWIDHSVCEGYP
SIO_010081: PLIM_RS24915
subclass of: SO_0000673
so part of: PLIM_RS24915
location: 21502..21636
location: region:21502-21636:1
so has part: feature:21502-21636:1:exon

WP_013112512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21502-21636:1:exon

PLIM_RS21935
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21935
old locus tag: Plim_4275
so part of: sequence
location: 21633..22457
location: region:21633-22457:1
so has part: feature:21633-22457:1:exon
subclass of: SO_0000010

position:21633:1
position: 21633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22457:1
position: 22457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21633-22457:1:exon

PLIM_RS21935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21935
old locus tag: Plim_4275
inference: COORDINATES: protein motif:HMM:NF014177.2
GO function: GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0032775 - DNA methylation on adenine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA adenine methylase
translation: MRNQIVCWFGSKAALAPEILPEFGPHKAYFEPFAGGMAMLLRKPPCLRETVNDLHQDLTNLARVLAHPIDGAALYRRLSRMLCNEQLHRESRELLEQPFEPGLERAVHYFYVSWMGRMGSIGASTCNSMAHGYKTSSNSCSRKLRAAVESINAWRKRLRDVTITNRDAFTLIDQLGDESGMLIYLDPPYIEKKGKYHFDLRPEDHGRLADAVKRFKKARVIVSYTDHPQLAQLYPPDRWTKRVLVHKSQTNKLAKRGIVKPPEVLLINGPSLSA
SIO_010081: PLIM_RS21935
subclass of: SO_0000673
so part of: PLIM_RS21935
location: 21633..22457
location: region:21633-22457:1
so has part: feature:21633-22457:1:exon

WP_013112513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21633-22457:1:exon

PLIM_RS21940
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21940
so part of: sequence
location: 22494..22557
location: region:22494-22557:1
so has part: feature:22494-22557:1:exon
subclass of: SO_0000663

position:22494:1
position: 22494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22557:1
position: 22557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22494-22557:1:exon

PLIM_RS21940
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 521674
locus tag: PLIM_RS21940
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:22525..22527,aa:Lys,seq:ttt)
SIO_010081: PLIM_RS21940
subclass of: SO_0000673
so part of: PLIM_RS21940
location: 22494..22557
location: region:22494-22557:1
so has part: feature:22494-22557:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22494-22557:1:exon

PLIM_RS21945
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21945
old locus tag: Plim_4277
so part of: sequence
location: 22906..23475
location: region:22906-23475:1
so has part: feature:22906-23475:1:exon
subclass of: SO_0000010

position:22906:1
position: 22906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23475:1
position: 23475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22906-23475:1:exon

PLIM_RS21945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21945
old locus tag: Plim_4277
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRLSGCAVVCFLGLVALCIIPAIFAKRGGPATNRVTPQPVGPAKPVDQSDVKVIPGLMPVDIYMNLTKQGFLKQGPVGSPPMWRLTRESDGVKMDVEIFSPGSMSSVSSVRAFCFSPSGVRVDEAGKMQFLFPYLATLPYQGAEPIKAQEWVIEHMKTGGETIIGSVKFEILGADNEFSRSLRISVVE
SIO_010081: PLIM_RS21945
subclass of: SO_0000673
so part of: PLIM_RS21945
location: 22906..23475
location: region:22906-23475:1
so has part: feature:22906-23475:1:exon

WP_013112515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22906-23475:1:exon

PLIM_RS21950
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21950
old locus tag: Plim_4278
so part of: sequence
location: 24051..25166
location: region:24051-25166:1
so has part: feature:24051-25166:1:exon
subclass of: SO_0000010

position:24051:1
position: 24051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25166:1
position: 25166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24051-25166:1:exon

PLIM_RS21950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21950
old locus tag: Plim_4278
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MQNQFTLTRSRPEQAQPPRIFKLVIDDDQVSYGDAPLSIHSTLRECFEKAVLPEIEIAESTIIEYEAMLNHWERIMRTVGVGTIDKAMLKQFRDRLAAERWTRSKLAKATGKPRSAATVNKVMRHLKAVVMKLFPPDRHNPEGLGLVPLCKFPGRLEEPAKLPFTYSRSAMSALYRNAHAAKPEKTTRSTPLYRPELWQLAIVLGFGTGPRSWDLLSMTWDRIGWEDFKYGSISFKAQKTKKLQRIPLSQVARRHLEMVRDLQLHESEIFPMFRKTNRSVYRCWRRICLAAGLISPEGRNAHFEDLRKTCSTAYDDISPGVGPWITGHELQGVNAKNYQNPTKRVLKAVKQLKQPLAFREGAGLLKPTTPE
SIO_010081: PLIM_RS21950
subclass of: SO_0000673
so part of: PLIM_RS21950
location: 24051..25166
location: region:24051-25166:1
so has part: feature:24051-25166:1:exon

WP_013112516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24051-25166:1:exon

PLIM_RS21960
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21960
old locus tag: Plim_4280
so part of: sequence
location: 25498..26154
location: region:25498-26154:1
so has part: feature:25498-26154:1:exon
subclass of: SO_0000010

position:25498:1
position: 25498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26154:1
position: 26154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25498-26154:1:exon

PLIM_RS21960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21960
old locus tag: Plim_4280
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSARFELKITSPVGLASADEAAGRALIDLAQVTPIRDGQAFVACTESRMLAIARCESSATNQCLVGADLLREPRSFNALAPRAFPPVDKLLEQELKRPSAATVTFNCRLLKKLAKALGSSDGQVTIIVSDDPTSPIKVVTRTGDIGLLMPVEPPIFVIEEYDPPAKRQASADECWRLQAQEYVDAHERSQASAAVTPQAQPAGSDIDRKSEGGQAHGD
SIO_010081: PLIM_RS21960
subclass of: SO_0000673
so part of: PLIM_RS21960
location: 25498..26154
location: region:25498-26154:1
so has part: feature:25498-26154:1:exon

WP_013112518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25498-26154:1:exon

PLIM_RS21965
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21965
old locus tag: Plim_4281
so part of: sequence
location: 26144..26368
location: region:26144-26368:1
so has part: feature:26144-26368:1:exon
subclass of: SO_0000010

position:26144:1
position: 26144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26368:1
position: 26368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26144-26368:1:exon

PLIM_RS21965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21965
old locus tag: Plim_4281
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVIDLQAAFIDMLAEGWTNDGPMTEDQFAQLQAAFFGGVACAVTDLPIDHPHREAINIQLQKFFRQFKAKNGLA
SIO_010081: PLIM_RS21965
subclass of: SO_0000673
so part of: PLIM_RS21965
location: 26144..26368
location: region:26144-26368:1
so has part: feature:26144-26368:1:exon

WP_013112519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26144-26368:1:exon

PLIM_RS21970
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21970
old locus tag: Plim_4282
so part of: sequence
location: 26404..26613
location: region:26404-26613:1
so has part: feature:26404-26613:1:exon
subclass of: SO_0000010

position:26404:1
position: 26404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26613:1
position: 26613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26404-26613:1:exon

PLIM_RS21970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21970
old locus tag: Plim_4282
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004806691.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon storage regulator
translation: MLVLSRRPHESIRLTIPENLPPGTVIEITTLEVRANAVRIGLTAPRSVQIARSELVDESGVTSKEAPDE
SIO_010081: PLIM_RS21970
subclass of: SO_0000673
so part of: PLIM_RS21970
location: 26404..26613
location: region:26404-26613:1
so has part: feature:26404-26613:1:exon

WP_013112520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26404-26613:1:exon

PLIM_RS21975
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21975
old locus tag: Plim_4283
so part of: sequence
location: 26606..27634
location: region:26606-27634:1
so has part: feature:26606-27634:1:exon
subclass of: SO_0000010

position:26606:1
position: 26606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27634:1
position: 27634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26606-27634:1:exon

PLIM_RS21975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21975
old locus tag: Plim_4283
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKHKSPAPGQQSLIVTPPYPRRPPYFALKFLRLVDRFFGPQYNPRIVQILMYVVLTEDRRRYASEPTFWLSQIRDRIGLKDDSHTAALIQQAVQSGWLYWHKPSNRELATAWVLVPLAYECELSNGSEAEDHLPGLQPGYHPGYHPRKDPGKDPVKDPLSSFPNLNPSPSPKDAVEEVVEKLLQAAGVAKHLETIEASRKLGNSFEWMRAKIQHFQANKGSDWGPGLLATHLKCRSFAGTPANHGWPTRTTSVASRTPDAAAEAIRSTQQLERDRRERQLEFQFGPLVDQLSSDEQIDLLKARPDADRLIELFRSSHRARGKGGVVRRALLEEFAKRHTAA
SIO_010081: PLIM_RS21975
subclass of: SO_0000673
so part of: PLIM_RS21975
location: 26606..27634
location: region:26606-27634:1
so has part: feature:26606-27634:1:exon

WP_013112521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26606-27634:1:exon

PLIM_RS21980
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21980
old locus tag: Plim_4284
so part of: sequence
location: 27713..28099
location: region:27713-28099:1
so has part: feature:27713-28099:1:exon
subclass of: SO_0000010

position:27713:1
position: 27713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28099:1
position: 28099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27713-28099:1:exon

PLIM_RS21980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21980
old locus tag: Plim_4284
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKIPTTIDGFYDWLCRQVPEGTTVNFIVALFHSAERGRVYTSVKYNVDLNDYSKDRPEQIRELLNKDFHSLEQAGKWVTNHAIPLLKGARLEVPRPKQRRLTDTPIGLPNKQPLRLEHKPEPSPLIP
SIO_010081: PLIM_RS21980
subclass of: SO_0000673
so part of: PLIM_RS21980
location: 27713..28099
location: region:27713-28099:1
so has part: feature:27713-28099:1:exon

WP_041404070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27713-28099:1:exon

PLIM_RS24305
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS24305
so part of: sequence
location: 28479..28694
location: region:28479-28694:1
so has part: feature:28479-28694:1:exon
subclass of: SO_0000010

position:28479:1
position: 28479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28694:1
position: 28694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28479-28694:1:exon

PLIM_RS24305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS24305
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQLAKDDKSELVMQLVENLDIENAFDVELHSLPLNVGDDLVPHAVFLTYARPVTSAHQLSTLVEVLRMYCQ
SIO_010081: PLIM_RS24305
subclass of: SO_0000673
so part of: PLIM_RS24305
location: 28479..28694
location: region:28479-28694:1
so has part: feature:28479-28694:1:exon

WP_148227399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28479-28694:1:exon

PLIM_RS21990
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21990
old locus tag: Plim_4288
so part of: sequence
location: complement(28897..29193)
location: region:28897-29193:-1
so has part: feature:28897-29193:-1:exon
subclass of: SO_0000010

position:28897:-1
position: 28897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29193:-1
position: 29193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28897-29193:-1:exon

PLIM_RS21990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21990
old locus tag: Plim_4288
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFAVAFEGAEQLAAARPWHPVAFATVAALVADQLASQPLPPDPPRTDQPAGLLNEIVVVDVGPTFLTAAVMASVDFAAKDAAEELHDHVSTRDNTSSA
SIO_010081: PLIM_RS21990
subclass of: SO_0000673
so part of: PLIM_RS21990
location: complement(28897..29193)
location: region:28897-29193:-1
so has part: feature:28897-29193:-1:exon

WP_013112526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28897-29193:-1:exon

PLIM_RS21995
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS21995
old locus tag: Plim_4289
so part of: sequence
location: 29216..29470
location: region:29216-29470:1
so has part: feature:29216-29470:1:exon
subclass of: SO_0000010

position:29216:1
position: 29216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29470:1
position: 29470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29216-29470:1:exon

PLIM_RS21995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS21995
old locus tag: Plim_4289
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTKRNPKNLREWQEAADAAELFLQIDSARSYGLITGGPAVDVDRCEELLKLAARRKIRPNKDALGLILQGLKTTGGQLVEKPR
SIO_010081: PLIM_RS21995
subclass of: SO_0000673
so part of: PLIM_RS21995
location: 29216..29470
location: region:29216-29470:1
so has part: feature:29216-29470:1:exon

WP_013112527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29216-29470:1:exon

PLIM_RS22000
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS22000
old locus tag: Plim_4290
so part of: sequence
location: 29467..29817
location: region:29467-29817:1
so has part: feature:29467-29817:1:exon
subclass of: SO_0000010

position:29467:1
position: 29467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29817:1
position: 29817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29467-29817:1:exon

PLIM_RS22000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS22000
old locus tag: Plim_4290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020402232.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRNMSFMLTTQQILDRSKTVTRRLGWKFLKPGELLQACEKCQGLKPGEQLRKLAVIEVVSIRTEPLNAIRDDDVAREGFPDQHWHQFVDMFCEAMACRPTDPVQRIEFKYVDEVAP
SIO_010081: PLIM_RS22000
subclass of: SO_0000673
so part of: PLIM_RS22000
location: 29467..29817
location: region:29467-29817:1
so has part: feature:29467-29817:1:exon

WP_013112528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29467-29817:1:exon

PLIM_RS23480
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS23480
old locus tag: Plim_4291
so part of: sequence
location: 29814..30110
location: region:29814-30110:1
so has part: feature:29814-30110:1:exon
subclass of: SO_0000010

position:29814:1
position: 29814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30110:1
position: 30110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29814-30110:1:exon

PLIM_RS23480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS23480
old locus tag: Plim_4291
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017483405.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSHPTNEAPQLFEDDTVRPKPASRKLPPCIPSPSGTGPAGETCMSCRHLCRVRHNDYVYLKCGHMKHSWSRGAGTDIRAGWAACRQWEKKDRREVAQ
SIO_010081: PLIM_RS23480
subclass of: SO_0000673
so part of: PLIM_RS23480
location: 29814..30110
location: region:29814-30110:1
so has part: feature:29814-30110:1:exon

WP_013112529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29814-30110:1:exon

PLIM_RS24635
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS24635
old locus tag: Plim_4292
so part of: sequence
location: 30239..30514
location: region:30239-30514:1
so has part: feature:30239-30514:1:exon
subclass of: SO_0000010

position:30239:1
position: 30239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30514:1
position: 30514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30239-30514:1:exon

PLIM_RS24635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS24635
old locus tag: Plim_4292
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTCQRIIAVGECFIDHPRLGSLCSVCCDNWLKQKEDDAWDEYSMADEEEEKQGLYSFCNSLTELRLALRSLKWVSAQENDAAAQVGLEVAE
SIO_010081: PLIM_RS24635
subclass of: SO_0000673
so part of: PLIM_RS24635
location: 30239..30514
location: region:30239-30514:1
so has part: feature:30239-30514:1:exon

WP_041404072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30239-30514:1:exon

PLIM_RS22015
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS22015
old locus tag: Plim_4293
so part of: sequence
location: 30511..30912
location: region:30511-30912:1
so has part: feature:30511-30912:1:exon
subclass of: SO_0000010

position:30511:1
position: 30511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30912:1
position: 30912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30511-30912:1:exon

PLIM_RS22015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS22015
old locus tag: Plim_4293
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKHLTLKNATGFSRGGHSKTYPAGTICIVYSAIDHNQHLDLKWLGDELKKARKLNEGKSGPPAYLVVIVEGEFITVLPREQMAIAECDQPEPAIHLAGFRSAPITLQQSEVLPAAAPDPVKPPKKAPQRSLFE
SIO_010081: PLIM_RS22015
subclass of: SO_0000673
so part of: PLIM_RS22015
location: 30511..30912
location: region:30511-30912:1
so has part: feature:30511-30912:1:exon

WP_013112531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30511-30912:1:exon

PLIM_RS22025
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS22025
old locus tag: Plim_4295
so part of: sequence
location: 31127..31486
location: region:31127-31486:1
so has part: feature:31127-31486:1:exon
subclass of: SO_0000010

position:31127:1
position: 31127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31486:1
position: 31486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31127-31486:1:exon

PLIM_RS22025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS22025
old locus tag: Plim_4295
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKVIEVKQAKPTKEDYECFLEFMYGLERMLEHRVHPDRNKDEEIDINWIDENLRYWIERQWDNRSKPLDVSLVWQRVFYAGQCAVENSCDPSKKVLEWRPEIQRALDFYEAHGPKVIK
SIO_010081: PLIM_RS22025
subclass of: SO_0000673
so part of: PLIM_RS22025
location: 31127..31486
location: region:31127-31486:1
so has part: feature:31127-31486:1:exon

WP_013112533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31127-31486:1:exon

PLIM_RS22030
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS22030
old locus tag: Plim_4296
so part of: sequence
location: 31483..33477
location: region:31483-33477:1
so has part: feature:31483-33477:1:exon
subclass of: SO_0000010

position:31483:1
position: 31483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33477:1
position: 33477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31483-33477:1:exon

PLIM_RS22030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS22030
old locus tag: Plim_4296
inference: COORDINATES: protein motif:HMM:TIGR00180.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MIESLSDLRPLFEQPGEEGDWWRAIMPYIASQVSGWSSAWMTKTEEELLNPTYVAALALGSINDRTKGLHFEHGHSWVTSEVNHALRNLESMCSPTPEEEEFFMATKTKPAPAKPTKATKPAKPKETAPEVTSESSQEHPGKAFIVDRSRDIPLSQLDPSPWQVRKKTSSEWIAELGQSLLDDGQLAPLLVRLSKIINQGSLANRYEIIAGHTRAFAAGQVGLKSLRCDILECDDETAQRLVLIDNAKRKDLTKIEQAQALKALVETYEAAGKSQRQLAADIGISQGQISNLTRLLLLPPEVQELVISGEITQASAREAVPMLQHPKIAKAFVAEIADIRDVAVEEAERQGEEARIDLMNSIRSVVREIGQPLDGQIYYKGRWVNRAFKLTPEIEEQLDIVDLSSNPKDPRRYALNKKLFEELQDKAEAKKKADEQKGIEGKCSGKKQLTPAQQKEKDKQQAEQLAARIAKWKIRIQKDMVCDWIDTTASEREMVSVLGWLWLHWQHHSEKRVISESLREALQESGMKDFNPDERELVKALLKADQPKDDLVFPQVLRSMGLKILRRCEVAPFRIADPEIIQIIFDYARLNIETVWASAYGEDVEEFFGMHSTAQLTALAKELKISVSSPKKIDMIDDLLQHCWGKPCPKSIIDAKAADASGKW
SIO_010081: PLIM_RS22030
subclass of: SO_0000673
so part of: PLIM_RS22030
location: 31483..33477
location: region:31483-33477:1
so has part: feature:31483-33477:1:exon

WP_041404074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31483-33477:1:exon

PLIM_RS22035
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS22035
old locus tag: Plim_4297
so part of: sequence
location: 33586..33804
location: region:33586-33804:1
so has part: feature:33586-33804:1:exon
subclass of: SO_0000010

position:33586:1
position: 33586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33804:1
position: 33804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33586-33804:1:exon

PLIM_RS22035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS22035
old locus tag: Plim_4297
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLAAYIYPASHELHGKVICVLPATHRCKVLNKACKRIFGTKEELPGKVATLKGDAATRYSESLAANCLYSR
SIO_010081: PLIM_RS22035
subclass of: SO_0000673
so part of: PLIM_RS22035
location: 33586..33804
location: region:33586-33804:1
so has part: feature:33586-33804:1:exon

WP_013112535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33586-33804:1:exon

PLIM_RS22040
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS22040
old locus tag: Plim_4298
so part of: sequence
location: 33878..34132
location: region:33878-34132:1
so has part: feature:33878-34132:1:exon
subclass of: SO_0000010

position:33878:1
position: 33878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34132:1
position: 34132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33878-34132:1:exon

PLIM_RS22040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS22040
old locus tag: Plim_4298
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANLTAAHVDLDQGTNDDDRKFGYVFGDEGGFFFTHMPTLQETLDSIEVDEVDGDGGLTSEEVVEFLRTYLPGKIRFRGEESDE
SIO_010081: PLIM_RS22040
subclass of: SO_0000673
so part of: PLIM_RS22040
location: 33878..34132
location: region:33878-34132:1
so has part: feature:33878-34132:1:exon

WP_013112536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33878-34132:1:exon

PLIM_RS22045
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS22045
old locus tag: Plim_4299
so part of: sequence
location: 34201..34812
location: region:34201-34812:1
so has part: feature:34201-34812:1:exon
subclass of: SO_0000010

position:34201:1
position: 34201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34812:1
position: 34812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34201-34812:1:exon

PLIM_RS22045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS22045
old locus tag: Plim_4299
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQNACEFLADVGYEFLLSRCEQGRIVQDLIDAKVTPWPNRSGCKWIIPITWPDRVPGLVTWTGQMTLPKIINGMIDALKKAKDVEDIRAFQAPMTGATGFDLRTAIEPLDAGFSLDKLGMPIMRRVGLELLGIIGLQTLPLVSLGGRKAGVIYRGKMYQFPVLPRSGGYYHKWGNVTEMEIEEYIPPGLIDEDEIEPVAESVG
SIO_010081: PLIM_RS22045
subclass of: SO_0000673
so part of: PLIM_RS22045
location: 34201..34812
location: region:34201-34812:1
so has part: feature:34201-34812:1:exon

WP_013112537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34201-34812:1:exon

PLIM_RS22050
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS22050
old locus tag: Plim_4300
so part of: sequence
location: 34943..35380
location: region:34943-35380:1
so has part: feature:34943-35380:1:exon
subclass of: SO_0000010

position:34943:1
position: 34943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35380:1
position: 35380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34943-35380:1:exon

PLIM_RS22050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS22050
old locus tag: Plim_4300
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPRKRIPLEPRACEYCGTVYMPDRVTARWCQSGCYARWLIETRKAERAARRIVYEMVCPICDIKFQTSHHAKKFCSEKCQARDSSQRQIQRLKIDRETARRYRRAHIERLRSTPEGRAKIKRWNDQKNARVSAERRQRRLDRDKE
SIO_010081: PLIM_RS22050
subclass of: SO_0000673
so part of: PLIM_RS22050
location: 34943..35380
location: region:34943-35380:1
so has part: feature:34943-35380:1:exon

WP_013112538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34943-35380:1:exon

PLIM_RS22055
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS22055
old locus tag: Plim_4301
so part of: sequence
location: 35384..35659
location: region:35384-35659:1
so has part: feature:35384-35659:1:exon
subclass of: SO_0000010

position:35384:1
position: 35384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35659:1
position: 35659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35384-35659:1:exon

PLIM_RS22055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS22055
old locus tag: Plim_4301
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPAKRSITLPDEIDAKARKMASERELSLSGLICSLIVAEEGRKRAGRPKAELPVDEIVAQRQAGKTLQSLADAYGVNVGTIHRLIARQASL
SIO_010081: PLIM_RS22055
subclass of: SO_0000673
so part of: PLIM_RS22055
location: 35384..35659
location: region:35384-35659:1
so has part: feature:35384-35659:1:exon

WP_013112539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35384-35659:1:exon

PLIM_RS24485
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS24485
old locus tag: Plim_4302
so part of: sequence
location: complement(35656..35829)
location: region:35656-35829:-1
so has part: feature:35656-35829:-1:exon
subclass of: SO_0000010

position:35656:-1
position: 35656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35829:-1
position: 35829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35656-35829:-1:exon

PLIM_RS24485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS24485
old locus tag: Plim_4302
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAERSGQKFLRVPTTAQLSRRLQLIADQRKQSGRTPSIRSLALELIERGLQEIEDRH
SIO_010081: PLIM_RS24485
subclass of: SO_0000673
so part of: PLIM_RS24485
location: complement(35656..35829)
location: region:35656-35829:-1
so has part: feature:35656-35829:-1:exon

WP_013112540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35656-35829:-1:exon

PLIM_RS22060
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS22060
old locus tag: Plim_4303
so part of: sequence
location: complement(35958..36233)
location: region:35958-36233:-1
so has part: feature:35958-36233:-1:exon
subclass of: SO_0000010

position:35958:-1
position: 35958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36233:-1
position: 36233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35958-36233:-1:exon

PLIM_RS22060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS22060
old locus tag: Plim_4303
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
translation: MSVRDKRGAKVDLDRPNHDLWTYLISVNRDSPHNIRAISALMLRLLGNLSLDQIARVLKTHRGRVSRLLRRGRLIARTHLQAEEPVEVSLG
SIO_010081: PLIM_RS22060
subclass of: SO_0000673
so part of: PLIM_RS22060
location: complement(35958..36233)
location: region:35958-36233:-1
so has part: feature:35958-36233:-1:exon

WP_013112541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35958-36233:-1:exon

PLIM_RS22065
type: Gene
subclass of: SO_0000704
RO_0002162: 521674
locus tag: PLIM_RS22065
old locus tag: Plim_4304
so part of: sequence
location: 36330..36944
location: region:36330-36944:1
so has part: feature:36330-36944:1:exon
subclass of: SO_0000010

position:36330:1
position: 36330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36944:1
position: 36944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36330-36944:1:exon

PLIM_RS22065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521674
locus tag: PLIM_RS22065
old locus tag: Plim_4304
inference: COORDINATES: protein motif:HMM:NF019000.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: host-nuclease inhibitor Gam family protein
translation: MSSDDVLPIDPVISDEIELRQALKELQQLDVAMRKRAASLDREVRAIYERAGQHLVNVLGQSIPADVRAKSLQEAIINFANDYREELLKGRDKKSIEYPEGTLAWRTVPATIAASEGVKPDDIIERADKVAPWTIIVRKVLEKVKLFGVGFFEMFDVVYKPSMANIKKAWQAKRLKPADLKKLGLEVVPERESAFFKLPEVSLD
SIO_010081: PLIM_RS22065
subclass of: SO_0000673
so part of: PLIM_RS22065
location: 36330..36944
location: region:36330-36944:1
so has part: feature:36330-36944:1:exon

WP_013112542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36330-36944:1:exon