Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete sequence.
type: Entry
definition: Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete sequence.
sequence version: NC_014159.1
sequence date: 2023-05-02
sequence: sequence
division: CON
label: NC_014159.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN00002597
keyword: RefSeq
source: Tsukamurella paurometabola DSM 20162
organism: Tsukamurella paurometabola DSM 20162
taxonomy: Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Tsukamurellaceae; Tsukamurella.
reference: 1
references: 21886861
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001967.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4083016\nSource DNA and organism available from Hans-Peter Klenk at the\nGerman Collection of Microorganisms and Cell Cultures (DSMZ)\n(hans-peter.klenk@dsmz.de)\nContacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)\n David Bruce (microbe@cuba.jgi-psf.org)\nWhole genome sequencing and draft assembly at JGI-PGF\nFinishing done by JGI-LANL\nAnnotation by JGI-ORNL and JGI-PGF\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Metadata-START##\nOrganism Display Name :: Tsukamurella paurometabola DSM 20162\nCulture Collection ID :: DSM 20162, ATCC 8368\nGOLD Stamp ID :: Gi02254\nFunding Program :: DOE-GEBA 2007\nSequencing Depth :: 8.25x Sanger; 37.9x pyrosequence\nGene Calling Method :: Prodigal, GenePRIMP\nIsolation Site :: Cases of systemic infection, usually in\n association with other diseases\nHost Name :: Homo sapiens\nOxygen Requirement :: Aerobe\nCell Shape :: Rod-shaped\nMotility :: Nonmotile\nSporulation :: Nonsporulating\nTemperature Range :: Mesophile\nGram Staining :: gram+\nBiotic Relationship :: Free living\nDiseases :: None\nHabitat :: Sludge, Soil\n##Metadata-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/02/2023 01:39:15\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set…

sequence
subclass of: SO_0000155
sequence length: 99806
topology: circular
so has quality: SO_0000988
location: 1..99806
location: region:1-99806:1
RO_0002162: 521096

NC_014159
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN00002597
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Tsukamurella paurometabola type strain (no. 33)
author: Munk, A.C.
author: Lapidus, A.
author: Lucas, S.
author: Nolan, M.
author: Tice, H.
author: Cheng, J.F.
author: Del Rio, T.G.
author: Goodwin, L.
author: Pitluck, S.
author: Liolios, K.
author: Huntemann, M.
author: Ivanova, N.
author: Mavromatis, K.
author: Mikhailova, N.
author: Pati, A.
author: Chen, A.
author: Palaniappan, K.
author: Tapia, R.
author: Han, C.
author: Land, M.
author: Hauser, L.
author: Chang, Y.J.
author: Jeffries, C.D.
author: Brettin, T.
author: Yasawong, M.
author: Brambilla, E.M.
author: Rohde, M.
author: Sikorski, J.
author: Goker, M.
author: Detter, J.C.
author: Woyke, T.
author: Bristow, J.
author: Eisen, J.A.
author: Markowitz, V.
author: Hugenholtz, P.
author: Kyrpides, N.C.
author: Klenk, H.P.
journal: Stand Genomic Sci
volume: 4
issue: 3
pages: 342-351
year: 2011
pubmed: 21886861

21886861
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Kyrpides, N.
author: Mavromatis, K.
author: Ivanova, N.
author: Mikhailova, N.
author: Munk, A.C.
author: Brettin, T.
author: Detter, J.C.
author: Tapia, R.
author: Han, C.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Markowitz, V.
author: Cheng, J.-F.
author: Hugenholtz, P.
author: Woyke, T.
author: Wu, D.
author: Jando, M.
author: Brambilla, E.
author: Klenk, H.-P.
author: Eisen, J.A.
journal: Submitted (04-MAR-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99806:1
position: 99806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-99806:1:source
so part of: sequence
organism: Tsukamurella paurometabola DSM 20162
mol type: genomic DNA
strain: DSM 20162
type material: type strain of Tsukamurella paurometabola
plasmid: pTpau01
note: type strain of Tsukamurella paurometabola

521096
type: Taxonomy
SIO_000068: taxonomy

TPAU_RS22605
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS22605
old locus tag: Tpau_4244
so part of: sequence
location: complement(823..1935)
location: region:823-1935:-1
so has part: feature:823-1935:-1:exon
subclass of: SO_0000010

position:823:-1
position: 823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1935:-1
position: 1935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823-1935:-1:exon

TPAU_RS22605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS22605
old locus tag: Tpau_4244
inference: COORDINATES: protein motif:HMM:TIGR04033.1
GO function: GO:0008488 - gamma-glutamyl carboxylase activity [Evidence IEA]
GO process: GO:0017187 - peptidyl-glutamic acid carboxylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HTTM domain-containing protein
translation: MLTDLRVPAPWTSTIGLVRSLIALSLAGTLTFSSPNSLFTYRLDTGLAPTCTGINQAFAFCLVERSYLGWMQTLAVIVLLVIASGWRPQFTCLPHWYVQASFITAVAAPDGGEQVATIMTLLLLPICLTDSRRWAWQAYRPKPGSQSSTSNKTSYAFAIAAVGVLLMKLQGAIIYFQSSVSKLSHDEWANGTAFYYWSTDPAFGMTQWLHSLLAPLLSNPWTLPLFTWGPLLIEIFLVFALFSSNTRFRRIMLAMGIGFHLLIGIFLGLWSFAITMWAVDIVMLVPLGWSLQKFLPQLAKVTFPIRSLGDNLARGRAGSARREEARHDNADHRRNSGNTTNLVQRRRQSAARIGNTELSEKDQQEKAVNK
SIO_010081: TPAU_RS22605
subclass of: SO_0000673
so part of: TPAU_RS22605
location: complement(823..1935)
location: region:823-1935:-1
so has part: feature:823-1935:-1:exon

WP_013128801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:823-1935:-1:exon

TPAU_RS22610
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS22610
old locus tag: Tpau_4245
so part of: sequence
location: complement(1929..2468)
location: region:1929-2468:-1
so has part: feature:1929-2468:-1:exon
subclass of: SO_0000010

position:1929:-1
position: 1929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2468:-1
position: 2468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1929-2468:-1:exon

TPAU_RS22610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS22610
old locus tag: Tpau_4245
inference: COORDINATES: protein motif:HMM:NF036586.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SdpA family antimicrobial peptide system protein
translation: MAIVAAPFVVICFYVAAAWLPATPFHLPGQAEYVRSGLAALSPQGWAFFTKSPMEDSFALYKVETKGIAAPVGDFPYSKPGNVFGLDREPRKQSMEMAVALKRISSDSWRRCKSKDAATCAGQASLDDKPVNMAKSETPSPTYCGRIEVVRMKTTPWAWRDLNVPARAATEATSVEVQC
SIO_010081: TPAU_RS22610
subclass of: SO_0000673
so part of: TPAU_RS22610
location: complement(1929..2468)
location: region:1929-2468:-1
so has part: feature:1929-2468:-1:exon

WP_115330051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1929-2468:-1:exon

TPAU_RS22615
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS22615
old locus tag: Tpau_4246
so part of: sequence
location: complement(2563..3234)
location: region:2563-3234:-1
so has part: feature:2563-3234:-1:exon
subclass of: SO_0000010

position:2563:-1
position: 2563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3234:-1
position: 3234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2563-3234:-1:exon

TPAU_RS22615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS22615
old locus tag: Tpau_4246
inference: COORDINATES: protein motif:HMM:TIGR04032.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sporulation delaying protein family toxin
translation: MNNTKRRATALIAATCIAGAAVTAAPALAQPVSSPLPASPAATGGTGGEEIFRAVLLGEGPLAQKLAASNPELLSKLASAYPQNNTPQALAAGNLIVDKINAKNPGYFAQFKSATTSGDPYAVEAAINDGPVQIRSAGITTKEIETEAPECGVFPFVALAVFHVAAAVTTVGGAVFELAAVAANAVYAQNVLWPNAERANGTASSLDRDRFMGQLTKSLQNVG
SIO_010081: TPAU_RS22615
subclass of: SO_0000673
so part of: TPAU_RS22615
location: complement(2563..3234)
location: region:2563-3234:-1
so has part: feature:2563-3234:-1:exon

WP_013128803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2563-3234:-1:exon

TPAU_RS21205
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21205
old locus tag: Tpau_4247
so part of: sequence
location: 3460..3741
location: region:3460-3741:1
so has part: feature:3460-3741:1:exon
subclass of: SO_0000010

position:3460:1
position: 3460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3741:1
position: 3741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3460-3741:1:exon

TPAU_RS21205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21205
old locus tag: Tpau_4247
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015293356.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIEFIEGAVRHGFTIAVAMHVISNARCHEPQFAQPRVLFGVKPDLWIGPSMQPSAPLIEVMAEVSPPSTVLIDTRARSAEEVPGRIPGMNGK
SIO_010081: TPAU_RS21205
subclass of: SO_0000673
so part of: TPAU_RS21205
location: 3460..3741
location: region:3460-3741:1
so has part: feature:3460-3741:1:exon

WP_115330053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3460-3741:1:exon

TPAU_RS21210
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21210
old locus tag: Tpau_4248
so part of: sequence
location: 3744..4061
location: region:3744-4061:1
so has part: feature:3744-4061:1:exon
subclass of: SO_0000010

position:3744:1
position: 3744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4061:1
position: 4061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3744-4061:1:exon

TPAU_RS21210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21210
old locus tag: Tpau_4248
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015293355.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix domain-containing protein
translation: MSKKIDQGRYNRLADWAQSDAPVIHPSRGISGDAAAAAGADLLRRAGRPSLEESGATSPRRQVRLPESLSKRVDALAEADGRTPSELMREAIADYVDAHENHRAG
SIO_010081: TPAU_RS21210
subclass of: SO_0000673
so part of: TPAU_RS21210
location: 3744..4061
location: region:3744-4061:1
so has part: feature:3744-4061:1:exon

WP_013128805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3744-4061:1:exon

TPAU_RS21215
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21215
old locus tag: Tpau_4249
so part of: sequence
location: 4107..4478
location: region:4107-4478:1
so has part: feature:4107-4478:1:exon
subclass of: SO_0000010

position:4107:1
position: 4107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4478:1
position: 4478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4107-4478:1:exon

TPAU_RS21215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21215
old locus tag: Tpau_4249
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013124935.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSAAMTIMLAAGNPADAPMPFFEMYVRPLILIGVGLFVVTWPLWLVLAFVLAKPRAHARAAMLAARTRGQYRVARRRRNWLVFWHTLACVLGLGPFFAVAFGAIKGPVIAPQARSYPVHYPY
SIO_010081: TPAU_RS21215
subclass of: SO_0000673
so part of: TPAU_RS21215
location: 4107..4478
location: region:4107-4478:1
so has part: feature:4107-4478:1:exon

WP_013128806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4107-4478:1:exon

TPAU_RS23020
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS23020
so part of: sequence
location: 4495..5262
location: region:4495-5262:1
so has part: feature:4495-5262:1:exon
subclass of: SO_0000010

position:4495:1
position: 4495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5262:1
position: 5262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4495-5262:1:exon

TPAU_RS23020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS23020
EC number: 3.4.-.-
inference: COORDINATES: protein motif:HMM:NF014566.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0071586 - CAAX-box protein processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CPBP family intramembrane metalloprotease
translation: MNADLLVRARAFFANRPVDASCLLVLVRVIWVSASIVALMAPEELYEQDLSRGVVLAAVAATVGIVVVVGGHWLTQSSLLPSASWLGFALPRRWWLWLPVGAAAGFALSRGLTALHLPQLWPALTDSTAQQLANSEQQAAEAFTWTDWTHAAGEEVIFRVPVIIVACSALGLAGARMTDASRARLSVLAGVVIATTLLFGLIHLDYGWFNVVTTWVLGAGCAAIAIASRSVWPAAALHAAYNTANHFPDIVWNLW
SIO_010081: TPAU_RS23020
subclass of: SO_0000673
so part of: TPAU_RS23020
location: 4495..5262
location: region:4495-5262:1
so has part: feature:4495-5262:1:exon

WP_115330055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4495-5262:1:exon

TPAU_RS22125
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS22125
old locus tag: Tpau_4251
so part of: sequence
location: complement(5292..5924)
location: region:5292-5924:-1
so has part: feature:5292-5924:-1:exon
subclass of: SO_0000010

position:5292:-1
position: 5292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5924:-1
position: 5924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5292-5924:-1:exon

TPAU_RS22125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS22125
old locus tag: Tpau_4251
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013124956.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMKSQHSSGNSGEAELVQLAFEIPGLPAVDGQAGGAVAPGGRGRAPRRAFTAPPPAAAVAAFAGKLVTIPTGCLIFTGAISTPDGYGRVTISMPGEAKPVTVSAHRFALWAHQGQLPADGVLEHHCNEPLCVRVAGAHVHPSTQSANLRHAISSGRHHNSEAVVDSSRRAELSVAVRELTIAHRDGTPFDLSSYRRLRDITATAPTLPLW
SIO_010081: TPAU_RS22125
subclass of: SO_0000673
so part of: TPAU_RS22125
location: complement(5292..5924)
location: region:5292-5924:-1
so has part: feature:5292-5924:-1:exon

WP_013128808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5292-5924:-1:exon

TPAU_RS21230
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21230
old locus tag: Tpau_4252
so part of: sequence
location: complement(5938..6675)
location: region:5938-6675:-1
so has part: feature:5938-6675:-1:exon
subclass of: SO_0000010

position:5938:-1
position: 5938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6675:-1
position: 6675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5938-6675:-1:exon

TPAU_RS21230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21230
old locus tag: Tpau_4252
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAREWAPAGAAITVGAVLAAAALSDRYLWFVRPTYQLPLLATAAVLVVCGIIVVATGIAGRGHTEAREDHPCSCTDLEHGDGHQARADDSGAGHGLTVWLALAGAALIAVCATGPVTGALSSGKPLFAGGERTPVFKALPDGVPTVPLHQIGGRLRVGQTLDGRTISVTGQLVDEDGGLRIARMQLTCCASDAVRSSIRITGTGQLAPGTWITATVTAARGPDGPQLTVIESAVIDPPRNPYES
SIO_010081: TPAU_RS21230
subclass of: SO_0000673
so part of: TPAU_RS21230
location: complement(5938..6675)
location: region:5938-6675:-1
so has part: feature:5938-6675:-1:exon

WP_013128809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5938-6675:-1:exon

TPAU_RS21235
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21235
old locus tag: Tpau_4253
so part of: sequence
location: complement(6672..7700)
location: region:6672-7700:-1
so has part: feature:6672-7700:-1:exon
subclass of: SO_0000010

position:6672:-1
position: 6672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7700:-1
position: 7700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6672-7700:-1:exon

TPAU_RS21235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21235
old locus tag: Tpau_4253
inference: COORDINATES: protein motif:HMM:NF015715.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: permease
translation: MGAEAVHVGSGGAGRAKLAAVLPAVTVMLLALSSRAAGLRWPQAADAVAIAAAVVMQAAPFVVLGAVAGGAITAVSQRVDLRRWVPRSRVGAASVGVAASVGVLGCECASVTIAQRLTAGGMSRAAGLAVMFASPAVNPIVAVATFTALPGEPQIALARIAGGAVLAALAAVLLDRWWPTAAAAITRYRLSGTNHNDGHGHEHGDSGPVIVRQVLSDAVTGIGALVGAAVMVAGVRAVFAVTGFQVSETVPLLVVMLAAAAAAYLLAVCSSSDAFIVASFPGMPAAAQLTFLLVGPVADVKLTALHARAFSARVAARIAVLAIALALPIAAVAAAVIETVTG
SIO_010081: TPAU_RS21235
subclass of: SO_0000673
so part of: TPAU_RS21235
location: complement(6672..7700)
location: region:6672-7700:-1
so has part: feature:6672-7700:-1:exon

WP_013128810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6672-7700:-1:exon

TPAU_RS21240
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21240
old locus tag: Tpau_4254
so part of: sequence
location: complement(7731..8054)
location: region:7731-8054:-1
so has part: feature:7731-8054:-1:exon
subclass of: SO_0000010

position:7731:-1
position: 7731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8054:-1
position: 8054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7731-8054:-1:exon

TPAU_RS21240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21240
old locus tag: Tpau_4254
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMSAAARRGAAGVRCERGSGGRRAALAASWVLAVGAGLAVTVAGIVWCNAVLASESTVKALGLAASVAAGAAVGSGLSAIGVAVIDRAPRSQARPARTRTPAWGRRR
SIO_010081: TPAU_RS21240
subclass of: SO_0000673
so part of: TPAU_RS21240
location: complement(7731..8054)
location: region:7731-8054:-1
so has part: feature:7731-8054:-1:exon

WP_147291147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7731-8054:-1:exon

TPAU_RS21245
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21245
old locus tag: Tpau_4255
so part of: sequence
location: complement(8051..8527)
location: region:8051-8527:-1
so has part: feature:8051-8527:-1:exon
subclass of: SO_0000010

position:8051:-1
position: 8051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8527:-1
position: 8527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8051-8527:-1:exon

TPAU_RS21245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21245
old locus tag: Tpau_4255
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAAPTSEKTSKAASGASAGSTGARVSARDRARAAVAAAARARREREKRQEDAVTDYFKATEELDKLDAKRDAQHLAQAIALATMADDGLNHSDIAELTGASASEVSRLVSRGRKASAAPQENTTAAEGVAAGTDDESSGADNGEGANGGASAAERVQA
SIO_010081: TPAU_RS21245
subclass of: SO_0000673
so part of: TPAU_RS21245
location: complement(8051..8527)
location: region:8051-8527:-1
so has part: feature:8051-8527:-1:exon

WP_013128812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8051-8527:-1:exon

TPAU_RS21250
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
gene: mobF
locus tag: TPAU_RS21250
old locus tag: Tpau_4256
so part of: sequence
location: 9336..12434
location: region:9336-12434:1
so has part: feature:9336-12434:1:exon
subclass of: SO_0000010

position:9336:1
position: 9336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12434:1
position: 12434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9336-12434:1:exon

TPAU_RS21250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
gene: mobF
locus tag: TPAU_RS21250
old locus tag: Tpau_4256
inference: COORDINATES: protein motif:HMM:NF041492.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobF family relaxase
translation: MRRWSTVVMTMHVLHAGDGYTYLTRSVASADQQRGRGTSLSDYYAANGTPPGQWTGRGLADLTAFGSPEGESGLVGGAVTEAQMRALFGEGLHPNADQLIDAGADVGDTRLGRRFPLYANAPSPFLKDFAAATKAFEAGQQRRPDAAERDQMWMRAAREHYELAHPNKVDPSEQAVRAWAGRQRAATRQPVAGYDLTFTPVKSVSVLWSLGDEDTRRTIEACHREAADESIRYLEDNALVTRRGGKGEAQIDAGGLVIAAFDHYDNRDGEPNLHTHYAVSNKVLGSDGRWSSIDGTPWFKAASTASARYNAALADKLTDRLGVEFRSRSKGADKEPVLEIAGITDTRIASHAGRTATIEQRYAELEADYIDRHQRAPGRAARYQLRQKANLDTRRAKAALATGSAADRGDGAAVVHGLGATLERARKVDVAAHPDAARGRALLEHCQAEAARLTDFRADTARLSVDELADLTTAKLEQRFNSWSPTTVTRWATIVVAQQATEGTLPDGVARADLIEQVTAAVTRDSLRIDAVHPVLDTSTGLIPEAMQRRNGEHILTPVGSTLLTSTRVVESEHNLILASETVTSTVATDAAVKAAIAAVGEETGFALNEGQARLVEHFCSSGALLAVGVGPAGTGKTTSMKATIAAWENTTGLPQSVQGRKVIALAPSAAAAMKLGDELGMGTSGDPADAARTIDTEVVFFTANMKALAAAREAGDTTQVKRLRERMTRRIPRGSMLLVDEAGMASTANLHEILRIAKATGSVVRLLGDPLQLDAVDRGGALELLAKHTDAPTLTKVVRFVQSERAADGTLAAATTQVVEDGVEKTVKKGLDTIAAENSLRMRDGHHDSLTMFDERGWTHHHSAKEAALTDVVAAHLADQQRGSNAMVVATTRADVKTLNEMLQAHHRETGTDRTDRTVSLSDGLTAGRGDIIVTRDNIKIKRRGGSHDRMPIANGELWTVEKIDRDGGITARNIDDGGRIELPADYLRANTELGYALTIHRSQGATVDTLNPPVGLTVSRRRPSSGASAR
SIO_010081: TPAU_RS21250
subclass of: SO_0000673
so part of: TPAU_RS21250
location: 9336..12434
location: region:9336-12434:1
so has part: feature:9336-12434:1:exon

WP_187291005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9336-12434:1:exon

TPAU_RS22620
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS22620
old locus tag: Tpau_4257
pseudo: true
so part of: sequence
location: 12550..>12960
location: region:12550-12960:1
so has part: feature:12550-12960:1:exon
subclass of: SO_0000010

position:12550:1
position: 12550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12960:1
position: 12960
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12550-12960:1:exon

TPAU_RS22620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS22620
old locus tag: Tpau_4257
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004666660.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: TPAU_RS22620
subclass of: SO_0000673
so part of: TPAU_RS22620
location: 12550..>12960
location: region:12550-12960:1
so has part: feature:12550-12960:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12550-12960:1:exon

TPAU_RS21260
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21260
old locus tag: Tpau_4258
so part of: sequence
location: complement(13104..13352)
location: region:13104-13352:-1
so has part: feature:13104-13352:-1:exon
subclass of: SO_0000010

position:13104:-1
position: 13104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13352:-1
position: 13352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13104-13352:-1:exon

TPAU_RS21260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21260
old locus tag: Tpau_4258
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRESGSTLSREARKEEVPLLKEDMPAARTFGQSPDLVIPDNFDAPLPNDEQAFWDASADSPQAQWEADSTTTTPEIEAVDQK
SIO_010081: TPAU_RS21260
subclass of: SO_0000673
so part of: TPAU_RS21260
location: complement(13104..13352)
location: region:13104-13352:-1
so has part: feature:13104-13352:-1:exon

WP_147291143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13104-13352:-1:exon

TPAU_RS21265
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21265
old locus tag: Tpau_4259
so part of: sequence
location: 13426..13950
location: region:13426-13950:1
so has part: feature:13426-13950:1:exon
subclass of: SO_0000010

position:13426:1
position: 13426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13950:1
position: 13950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13426-13950:1:exon

TPAU_RS21265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21265
old locus tag: Tpau_4259
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKREYTRFLLDTEQKTYARLRAARPLPTEVTAKWDMDFRGDLRFMKAARKGSWELGVGYLKERPLDAQARTLLIGHDGIMAGVVVEIMMDEAQAAAEDLRTALRGKQPRSLLGLTPPLDPQDTRNCAKFLDQAADYVGVLGFVHGEELPAGTTVVNGLIYLGPQGVAGWRDEF
SIO_010081: TPAU_RS21265
subclass of: SO_0000673
so part of: TPAU_RS21265
location: 13426..13950
location: region:13426-13950:1
so has part: feature:13426-13950:1:exon

WP_147291144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13426-13950:1:exon

TPAU_RS21270
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21270
old locus tag: Tpau_4260
so part of: sequence
location: 14005..14316
location: region:14005-14316:1
so has part: feature:14005-14316:1:exon
subclass of: SO_0000010

position:14005:1
position: 14005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14316:1
position: 14316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14005-14316:1:exon

TPAU_RS21270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21270
old locus tag: Tpau_4260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNQLPEGVPIDPRLDEVRTQVTDLLVAAAQMQRRTSGDRSGPLEEGGRPLWNGPAEPIDFSDFLASVLCDVADRVGGVDTLISGRPGSWESEHVAALAQSLN
SIO_010081: TPAU_RS21270
subclass of: SO_0000673
so part of: TPAU_RS21270
location: 14005..14316
location: region:14005-14316:1
so has part: feature:14005-14316:1:exon

WP_013128815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14005-14316:1:exon

TPAU_RS21275
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21275
old locus tag: Tpau_4261
so part of: sequence
location: 14340..14921
location: region:14340-14921:1
so has part: feature:14340-14921:1:exon
subclass of: SO_0000010

position:14340:1
position: 14340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14921:1
position: 14921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14340-14921:1:exon

TPAU_RS21275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21275
old locus tag: Tpau_4261
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007170755.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MSTVAFVHTKGGVAKTTSSIYLGAAAHKRGMTVELLDADPQRSAGEWADDAAQAGDPLPFPVRTVTARSLRPTPGVDLSIIDTPPGTASVIAPSLEVADLVVIPTGVSPLDVRRVWPTLEVTAHKPTVVLLTGVALNTTLATEVRAALDDEGVAVATTPILRREGIRKAYGTAPRWPLYGYDDVLDELMGVLV
SIO_010081: TPAU_RS21275
subclass of: SO_0000673
so part of: TPAU_RS21275
location: 14340..14921
location: region:14340-14921:1
so has part: feature:14340-14921:1:exon

WP_013128816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14340-14921:1:exon

TPAU_RS21280
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21280
old locus tag: Tpau_4262
so part of: sequence
location: 14918..15145
location: region:14918-15145:1
so has part: feature:14918-15145:1:exon
subclass of: SO_0000010

position:14918:1
position: 14918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15145:1
position: 15145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14918-15145:1:exon

TPAU_RS21280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21280
old locus tag: Tpau_4262
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDLRSKVQKRVQPAAAAKPVADVLKSERSDVKRTTLYLSTDDVRALKQLALDEDTTMTALVNEGIAWVLQSRSK
SIO_010081: TPAU_RS21280
subclass of: SO_0000673
so part of: TPAU_RS21280
location: 14918..15145
location: region:14918-15145:1
so has part: feature:14918-15145:1:exon

WP_013128817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14918-15145:1:exon

TPAU_RS21285
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21285
old locus tag: Tpau_4263
so part of: sequence
location: complement(15252..15629)
location: region:15252-15629:-1
so has part: feature:15252-15629:-1:exon
subclass of: SO_0000010

position:15252:-1
position: 15252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15629:-1
position: 15629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15252-15629:-1:exon

TPAU_RS21285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21285
old locus tag: Tpau_4263
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTARAYDQFGPFYDSTGVADWLGISKHALAERVDAGTVVACLQDDAHRTWVYPAWQFTENRTVIPGLIEVWQILQQPAADPWIAIMWLQAPNSALHGASVVEHLRAGGALAPALATAREDAARWS
SIO_010081: TPAU_RS21285
subclass of: SO_0000673
so part of: TPAU_RS21285
location: complement(15252..15629)
location: region:15252-15629:-1
so has part: feature:15252-15629:-1:exon

WP_013128818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15252-15629:-1:exon

TPAU_RS23765
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS23765
old locus tag: Tpau_4264
so part of: sequence
location: 16036..16161
location: region:16036-16161:1
so has part: feature:16036-16161:1:exon
subclass of: SO_0000010

position:16036:1
position: 16036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16161:1
position: 16161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16036-16161:1:exon

TPAU_RS23765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS23765
old locus tag: Tpau_4264
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAPTSRKRGRKKRKPGERWAIASFAVNVARLGVELLLLMF
SIO_010081: TPAU_RS23765
subclass of: SO_0000673
so part of: TPAU_RS23765
location: 16036..16161
location: region:16036-16161:1
so has part: feature:16036-16161:1:exon

WP_013128819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16036-16161:1:exon

TPAU_RS21290
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21290
old locus tag: Tpau_4265
so part of: sequence
location: complement(16260..17018)
location: region:16260-17018:-1
so has part: feature:16260-17018:-1:exon
subclass of: SO_0000010

position:16260:-1
position: 16260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17018:-1
position: 17018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16260-17018:-1:exon

TPAU_RS21290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21290
old locus tag: Tpau_4265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020476876.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyl transferase AbiEii/AbiGii toxin family protein
translation: MTGKERPQWQVEAPPGGWAPPWPQLVELVRAIPHEKWTLVGGLMVQLHAAHAGMQLTRPTVDVDMVIHIETGAATWGSIREQLEGLGYVLSEPVGDGPVHRFTRGPRKQEQVDVMVADHLPPSQRPRVLKREVFAVPGGTSALRKTVNCEINTDQGIVVVSVPDVLGALVLKGAAYRSDPRDRDRHLDDAAILACTVKNPVQHKKRMIGHDRSRVQLLWEALEDPGHRAWVAPGEPWATRGRSALEVLAANP
SIO_010081: TPAU_RS21290
subclass of: SO_0000673
so part of: TPAU_RS21290
location: complement(16260..17018)
location: region:16260-17018:-1
so has part: feature:16260-17018:-1:exon

WP_086012739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16260-17018:-1:exon

TPAU_RS21295
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21295
old locus tag: Tpau_4266
so part of: sequence
location: complement(17015..17581)
location: region:17015-17581:-1
so has part: feature:17015-17581:-1:exon
subclass of: SO_0000010

position:17015:-1
position: 17015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17581:-1
position: 17581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17015-17581:-1:exon

TPAU_RS21295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21295
old locus tag: Tpau_4266
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010593474.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MLLLDGASVHRRAQARPHRGRPLSAAAAWAALALLSDESVDWVDPPVLSRLRARLRRSSAEEVAWLVRRRMARVKRMQGWGDNTGLLATGTSVLADPYWGELFGLATVHRDDFEGYVAEDRVESTARDLGLIEAPRGEYYLRVVPTEARWPVDEIYIATVAVDLMESLDTREAAAGHRVLTQLLGQVS
SIO_010081: TPAU_RS21295
subclass of: SO_0000673
so part of: TPAU_RS21295
location: complement(17015..17581)
location: region:17015-17581:-1
so has part: feature:17015-17581:-1:exon

WP_245537958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17015-17581:-1:exon

TPAU_RS21300
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21300
old locus tag: Tpau_4267
so part of: sequence
location: complement(17742..17987)
location: region:17742-17987:-1
so has part: feature:17742-17987:-1:exon
subclass of: SO_0000010

position:17742:-1
position: 17742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17987:-1
position: 17987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17742-17987:-1:exon

TPAU_RS21300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21300
old locus tag: Tpau_4267
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDPRLRTRLEGNFGSVKGEFYSRCYRQWVHLLSVGDVELLAAQITADTDFGGGLRTLSPLGILVSPETRRRIVIDLARNL
SIO_010081: TPAU_RS21300
subclass of: SO_0000673
so part of: TPAU_RS21300
location: complement(17742..17987)
location: region:17742-17987:-1
so has part: feature:17742-17987:-1:exon

WP_013128822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17742-17987:-1:exon

TPAU_RS21305
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21305
old locus tag: Tpau_4268
so part of: sequence
location: 18216..19481
location: region:18216-19481:1
so has part: feature:18216-19481:1:exon
subclass of: SO_0000010

position:18216:1
position: 18216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19481:1
position: 19481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18216-19481:1:exon

TPAU_RS21305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21305
old locus tag: Tpau_4268
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019971498.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MDDGRQPTEQELQLARELVAQAREQGASMSAPGMLRALTKTMLETALDEEITEHLGYDKHHIEGRGSGNSRNGARTKTVITETVGPIEIEVPRDREGSFDPKIVAKHQRRLNGVDEIVLSLAARGLTSGDIVAHFDQIYGASISKDTISRITDKIVEEMTGWFNRPLEPIYVAVFIDALHIKVRDGQVANRPFYAAIGVDLDGHKDVLGIWAGEGGGESAKFWYAVLSSLKSRGVNDVFFLVCDGLKGLPASVAAVWPETIVQTCVIHLLRNSFKYVPRQHWDTLKRDLKPIYTAIDATAAEAALDALDDTWGQKYPTMIRLWRNAWDEFIPFLDYNIEVRRVLYSTNAIESLNARYRRAVKARGHFPTEQAALKTLYLVTRALDPSGRGQNRWAARWKPALNAFAITFADRIPGLNRDQG
SIO_010081: TPAU_RS21305
subclass of: SO_0000673
so part of: TPAU_RS21305
location: 18216..19481
location: region:18216-19481:1
so has part: feature:18216-19481:1:exon

WP_245537922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18216-19481:1:exon

TPAU_RS21310
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21310
old locus tag: Tpau_4269
so part of: sequence
location: 19904..21115
location: region:19904-21115:1
so has part: feature:19904-21115:1:exon
subclass of: SO_0000010

position:19904:1
position: 19904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21115:1
position: 21115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19904-21115:1:exon

TPAU_RS21310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21310
old locus tag: Tpau_4269
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016695795.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MAGPDRWWVGVDVGKEFHWVAVCDDAGKVVSSRKVVNDEAAIATVIAEVDGRGGTVSWTVDLISPYATLLLTMLAAAGHSVRYLTGRAVWQASVVYRGGEAKSDAKDARVIADQGRMRGDDLPLLTPADGLVTELAMLTAHRSDLVADRTRTINRLRQQLVSVSPALERAAEPTADRGWVRLLARYQRPKVLRRTGVVRLTRMLSDAGVRNAGKIAEAAVEAAKAQTVALPGEDVAAALVAELAQGVIDLDTRIKNVDAAIEERFRRHPLAEAIVSLPGMGFRLGAEFLAAVGDPSRIVSADHLAAWAGLAPVSKDSGKRTGRLCTPKRYHRGLRRVMYMSAVTATRCDPESRAYYQRKRSQGKKHIPATICLARKRVNVLYALIRDNRTWQPTAPQITASAA
SIO_010081: TPAU_RS21310
subclass of: SO_0000673
so part of: TPAU_RS21310
location: 19904..21115
location: region:19904-21115:1
so has part: feature:19904-21115:1:exon

WP_013127436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19904-21115:1:exon

TPAU_RS21315
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21315
old locus tag: Tpau_4270
so part of: sequence
location: 21341..22333
location: region:21341-22333:1
so has part: feature:21341-22333:1:exon
subclass of: SO_0000010

position:21341:1
position: 21341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22333:1
position: 22333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21341-22333:1:exon

TPAU_RS21315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21315
old locus tag: Tpau_4270
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTVWGIGGLVLAYLGVMVASWRLPAAPEGRDPLGPEACRVAIARKARIAAGTAIALLGLGVFLAALTGLVFIGVGGLVLAVAVGWFAASQAPAMNGYAAAEAEYQETVAATVTAAEARWSAENAARVNRGERVQPFDPESVPWPAEPHLTPEEATDLGNRDGWNPPEGSAIAALTDDKGQPTPAANAVEKVARDLKWGKWDNVAGQGRNASGGTEPVFTPWVQLVRVEQLDGGDARVVLVSHHASVGADELTRRLDALLKAWRVRAAIPPVVFLDHATGELSVTVTNQRSNSGGAASDTPNDAAGFTPPPTSGRGSGSASFGDDSGIVW
SIO_010081: TPAU_RS21315
subclass of: SO_0000673
so part of: TPAU_RS21315
location: 21341..22333
location: region:21341-22333:1
so has part: feature:21341-22333:1:exon

WP_013128823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21341-22333:1:exon

TPAU_RS21320
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21320
old locus tag: Tpau_4271
so part of: sequence
location: 22330..24063
location: region:22330-24063:1
so has part: feature:22330-24063:1:exon
subclass of: SO_0000010

position:22330:1
position: 22330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24063:1
position: 24063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22330-24063:1:exon

TPAU_RS21320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21320
old locus tag: Tpau_4271
inference: COORDINATES: protein motif:HMM:NF013727.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FtsK/SpoIIIE domain-containing protein
translation: MSDPLDELIGDNDADPPKRSAGTSRPPNVKAARAERGTQDAAAAAATRAEARAEQAARVGRAADQVAAATADARAAAATLQMPAEADPIAAGRSAAEKLVDRWHEALTDPVIVAALGLPVGATGVARIDQLDALVVTVTLPAHITGIRVESLDLVRLAIDARFKSGEHRVSVSPSMRGPNGELVVLIVRDNAVDSSAEYRKASPAAAAFFLDVDHAQRRCFYSAGLTITRPDPAGQARTMAPRVLAARIGPTGPEFDVEILPGQTFEMWRAGAGKLAAMFKTPALDVVPHQHLARIRLNSRPLEFPRTVPLSPTAFVRPTTEAERAAAAPHLVVPIGVTATGERITVPLARRPHFVIAGTSGAGKSTTLRMMVSALGLQGAKLLLGDFKESTDMTSLADIPGVVHVATSVPTIARMIAWLGDELEWRKAVTAALAARGIDTPSWEPIVMIVDEWGAGISALIKGDTKSARELGESLLSIVTQLFAQGRSFAMHAGLSMQDTYVESLSGKIRQNASTKIVVGKPSTGSAAAHINALFEAGSEQAAALEAAKGIVDGMRGVGGHRKLPTGGHLRRILWP
SIO_010081: TPAU_RS21320
subclass of: SO_0000673
so part of: TPAU_RS21320
location: 22330..24063
location: region:22330-24063:1
so has part: feature:22330-24063:1:exon

WP_013128824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22330-24063:1:exon

TPAU_RS21325
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
gene: istA
locus tag: TPAU_RS21325
old locus tag: Tpau_4272
so part of: sequence
location: 24137..25690
location: region:24137-25690:1
so has part: feature:24137-25690:1:exon
subclass of: SO_0000010

position:24137:1
position: 24137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25690:1
position: 25690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24137-25690:1:exon

TPAU_RS21325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
gene: istA
locus tag: TPAU_RS21325
old locus tag: Tpau_4272
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558015.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MKSSREIMEILEAYDLTGSYRAAAELAGCDHHTVARYVKMRAAGQPPDRRRHRARAIDDFLPKIEELVVRSQGKVRADVVHERIVALGFTGGERTTRRTVAEAKAQFRAGRRRVYRPWVTEPGLWLQYDFGDGPTISGRKTTLFCAWLAWSRFRVVIPIWDKTLPTVAACLDATFRRLGGVPVYVLTDNEKTVTIDHVASIAVRNPEIVEVARHYGTTLRTCLPADPESKGGSEATVRIAKADLLPKEVNLRGQYHSFGELEAACRQFCTDVNDRVHSATRRRPVERLAEEAHRLHPLPKTPFTAVFGTTRRVNWDSTISVEGARYSVPHKLIDTRVWARFHGDELIVTAADDEDGAVEVARHPRGQPGSPVLDDGHYPPRPDKDDADRMPKPRTAAELAFLSLGPGANTWLIEAGAAGVRRIRAKMAEAVDLAKLHSPAAVDRALGTAAMTARFSDRDLISILDYQSIHEHAEPVRRSENHTLQPGTAAWSTFGQSPAPAIAAEVTSTNDDESDNA
SIO_010081: TPAU_RS21325
subclass of: SO_0000673
so part of: TPAU_RS21325
location: 24137..25690
location: region:24137-25690:1
so has part: feature:24137-25690:1:exon

WP_041945385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24137-25690:1:exon

TPAU_RS21330
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
gene: istB
locus tag: TPAU_RS21330
old locus tag: Tpau_4273
so part of: sequence
location: 25690..26481
location: region:25690-26481:1
so has part: feature:25690-26481:1:exon
subclass of: SO_0000010

position:26481:1
position: 26481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25690-26481:1:exon

TPAU_RS21330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
gene: istB
locus tag: TPAU_RS21330
old locus tag: Tpau_4273
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003944771.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element IS1415 family helper ATPase IstB
translation: MSTPLRTVTGTNGDPLAEAIDLTKRLKLPHIRRSLTDIIPTAKAQRWDPAEVVRVLLAEEAAGRDRANLHTRRKRAGFPTGKTFGDWDETKSSIPRATQDALRTLEWVGRRECFCVCGPSGTGKSHFTEALGQTAVEAGLAVSWFTIEDLGALVRRHRADDSIARALTRIIRSDLIIVDDIGLLPVSEDAAEGFYRLVDAAYERRSIAVSSNLHPSGFDEIMPKTLATATVDRLLHHAHVVVTDGDSFRLTEATTGKGVRPFS
SIO_010081: TPAU_RS21330
subclass of: SO_0000673
so part of: TPAU_RS21330
location: 25690..26481
location: region:25690-26481:1
so has part: feature:25690-26481:1:exon

WP_013128826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25690-26481:1:exon

TPAU_RS21335
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
gene: nrdH
locus tag: TPAU_RS21335
old locus tag: Tpau_4274
so part of: sequence
location: 26618..26869
location: region:26618-26869:1
so has part: feature:26618-26869:1:exon
subclass of: SO_0000010

position:26618:1
position: 26618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26869:1
position: 26869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26618-26869:1:exon

TPAU_RS21335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
gene: nrdH
locus tag: TPAU_RS21335
old locus tag: Tpau_4274
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006897724.1
GO function: GO:0097573 - glutathione oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutaredoxin-like protein NrdH
translation: MTSTTTTFTVYTKPACQQCTATFRALDKAGVTYRTVDVSEDTDARDYVMSLGYLQAPVVVVETATTDHWSGFRPDKLREHLAA
SIO_010081: TPAU_RS21335
subclass of: SO_0000673
so part of: TPAU_RS21335
location: 26618..26869
location: region:26618-26869:1
so has part: feature:26618-26869:1:exon

WP_041945402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26618-26869:1:exon

TPAU_RS21340
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21340
old locus tag: Tpau_4275
so part of: sequence
location: 27078..27536
location: region:27078-27536:1
so has part: feature:27078-27536:1:exon
subclass of: SO_0000010

position:27078:1
position: 27078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27536:1
position: 27536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27078-27536:1:exon

TPAU_RS21340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21340
old locus tag: Tpau_4275
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: replicative DNA helicase
translation: MLWAFITAPTDKARHIAGHLRAADFYQPSHADLYRVAIAARRTSCGLPGPQHVMDAIATVMASDSGRHRQLVRDLLVAIVGLDVDPNRLVEYASTVLHLAMRRHAINHAQRVVQLTAHAQPDELHALIAEAGTALQDTGMQQRYRQLNGLPV
SIO_010081: TPAU_RS21340
subclass of: SO_0000673
so part of: TPAU_RS21340
location: 27078..27536
location: region:27078-27536:1
so has part: feature:27078-27536:1:exon

WP_147291145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27078-27536:1:exon

TPAU_RS21345
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21345
old locus tag: Tpau_4276
so part of: sequence
location: 27751..29055
location: region:27751-29055:1
so has part: feature:27751-29055:1:exon
subclass of: SO_0000010

position:27751:1
position: 27751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29055:1
position: 29055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27751-29055:1:exon

TPAU_RS21345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21345
old locus tag: Tpau_4276
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014358297.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MLAVVENKRDGSGETGDSEAPRSLLDEIVRDGARRMLAAALEAEVAAYVASCAGEVDEAGRRLVVRNGHHAAREVVTAAGAVPVKAPRVNDKRVDEVTGERRRFSSSILPAWARKSTQVAEVLPLLYLHGLSTSDFTPALTQFLGTSAGLSPATITRLTRDWQAEAAAFGTRSLAETDYVYVWADGIHLKVRLAQEKVCLLVLIGVRADGSKELIALDDGYRESTQSWLDLLRSCKRRGMRSPVLAVGDGALGFWAALREVFPETREQRCWFHKIANVINALPKSVQRSAKAALTEIWNAQDREHAEKAARVFVADYAAKWPKAAAKITDDLDVLLAFYDYPAEHWVHLRTTNPIESTFATVRLRTKVTKGPGSRAAGIAMAFKLIQAAQTRWRAVNAPHLVALVRAGARFDQGRLVERAATTPETTAADDAAA
SIO_010081: TPAU_RS21345
subclass of: SO_0000673
so part of: TPAU_RS21345
location: 27751..29055
location: region:27751-29055:1
so has part: feature:27751-29055:1:exon

WP_041944585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27751-29055:1:exon

TPAU_RS21350
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21350
old locus tag: Tpau_4277
so part of: sequence
location: 29104..29868
location: region:29104-29868:1
so has part: feature:29104-29868:1:exon
subclass of: SO_0000010

position:29104:1
position: 29104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29868:1
position: 29868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29104-29868:1:exon

TPAU_RS21350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21350
old locus tag: Tpau_4277
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGHDRQDRFPDDHVPGGNAGRPWQPRGDLGDLDPDALFGAFGQPLTDGPTIEWMPGMADQMLRELAPLLAEDGIDITADALDTDLATLQAALDRAVARHNHTLATPTGEQRSWCTSTLRLLAESIDTDNLDLAEGILETVPPESPDGKATVAGVIGVGAQLLDSWLTTPPAGINKTAAATIVIRPPRWHGERAAIDLLALARKNKAHLSHGKIIAAHGGHTTLYGTALAVTAVLAAWADHTKTTVTNLAGTHLR
SIO_010081: TPAU_RS21350
subclass of: SO_0000673
so part of: TPAU_RS21350
location: 29104..29868
location: region:29104-29868:1
so has part: feature:29104-29868:1:exon

WP_041944233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29104-29868:1:exon

TPAU_RS21360
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21360
old locus tag: Tpau_4278
so part of: sequence
location: 31111..31785
location: region:31111-31785:1
so has part: feature:31111-31785:1:exon
subclass of: SO_0000010

position:31111:1
position: 31111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31785:1
position: 31785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31111-31785:1:exon

TPAU_RS21360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21360
old locus tag: Tpau_4278
inference: COORDINATES: protein motif:HMM:NF024949.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MSAIDEEEARAERFAAVVKSRRNELGLTRDDVAAAGGPSYSTMTTIENGRQFAQPLPATFRKLEAALGWAEGSAVAAWLKGEPPTLRRDSRPGHPVVDEDTVSLTITFIEELGSLAKDYEALAQDLDSPALRDVNHRLDTIVDRLMRKWVIKQVELRSTAPGVSTDKSYEVLVGEYLDRHLPEAGVLPDEDVDDLSYLRWLTGRNLPEHVDTSAFKLRWAQRER
SIO_010081: TPAU_RS21360
subclass of: SO_0000673
so part of: TPAU_RS21360
location: 31111..31785
location: region:31111-31785:1
so has part: feature:31111-31785:1:exon

WP_013128829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31111-31785:1:exon

TPAU_RS21365
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21365
old locus tag: Tpau_4279
so part of: sequence
location: 31891..32280
location: region:31891-32280:1
so has part: feature:31891-32280:1:exon
subclass of: SO_0000010

position:31891:1
position: 31891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32280:1
position: 32280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31891-32280:1:exon

TPAU_RS21365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21365
old locus tag: Tpau_4279
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATVLGQQFFDGSLIPVQQIERLRTPGAPLDPQADPPLLEALCTLCGVDSAYLTDSLAASRIDRQLRLWIAVRDRGLDHLAVRAGKAELTLDELDDLIELAESSAPPIAPVTSIAAPRRRRWPSRVQQR
SIO_010081: TPAU_RS21365
subclass of: SO_0000673
so part of: TPAU_RS21365
location: 31891..32280
location: region:31891-32280:1
so has part: feature:31891-32280:1:exon

WP_147291146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31891-32280:1:exon

TPAU_RS21370
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21370
old locus tag: Tpau_4280
so part of: sequence
location: 32315..33106
location: region:32315-33106:1
so has part: feature:32315-33106:1:exon
subclass of: SO_0000010

position:32315:1
position: 32315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33106:1
position: 33106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32315-33106:1:exon

TPAU_RS21370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21370
old locus tag: Tpau_4280
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020639817.1
GO function: GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SGNH/GDSL hydrolase family protein
translation: MAPYSNIAALGSSYASGPGIDPVDDRTVGRSARNYPHQLAQRFGAALTDLTVSGATTATILDAPQRVLFTKIAPQINGRPTNADLVTITAGGNDLGYIAAALKLGVVATADKYTRGSASRLLRPSLPQTTSDQIALAQAGLARIVREVRDRAPGARVVLVDYLPLLGDATRPGVDVPFDAQTIAALRTVADELAAVFRDAAAETAADLVSASELGRGHELGSSDPWVQPLYPVYRLTGSFHPTAAGMQAVADAVADHVSSPAQ
SIO_010081: TPAU_RS21370
subclass of: SO_0000673
so part of: TPAU_RS21370
location: 32315..33106
location: region:32315-33106:1
so has part: feature:32315-33106:1:exon

WP_013128831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32315-33106:1:exon

TPAU_RS21375
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21375
old locus tag: Tpau_4281
so part of: sequence
location: complement(33109..34263)
location: region:33109-34263:-1
so has part: feature:33109-34263:-1:exon
subclass of: SO_0000010

position:33109:-1
position: 33109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34263:-1
position: 34263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33109-34263:-1:exon

TPAU_RS21375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21375
old locus tag: Tpau_4281
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSPSAILHSQATSSTPTAVAVPLLAVCLAIVAVRWVAIRRGYEHQEFSIRVTQLMTIALAIAALRDGGIQDVVFAGNVAAARLVTHNFVLAGAVVFVLLIRSWVSAKQLSRRSIRILWGLWAVACVWITFCTWPTLSQNIAVEDLENWRTAGYLLVVSTPIPIACVYTLIFVTGALIRGVVPKFWAVVTLIAAFLQMVDHATRGISGLFLSLGVHNWLTQARSTGVDGLFIPAVAALTACGIPSAATYVRRMVGTDTARRQATQLQPLWRAITVAVPEVMLEQRPPSGSWWEIRHRYLVEIEDGLAVLRAHVPAAGSGASAGEQAASLLDGLRAYRAAGLDGADGAMQVDSELPEWVMEAEGAIAVSQEVRRRRAPFPEQMRV
SIO_010081: TPAU_RS21375
subclass of: SO_0000673
so part of: TPAU_RS21375
location: complement(33109..34263)
location: region:33109-34263:-1
so has part: feature:33109-34263:-1:exon

WP_013128832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33109-34263:-1:exon

TPAU_RS21380
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21380
old locus tag: Tpau_4282
so part of: sequence
location: complement(34273..34770)
location: region:34273-34770:-1
so has part: feature:34273-34770:-1:exon
subclass of: SO_0000010

position:34273:-1
position: 34273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34770:-1
position: 34770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34273-34770:-1:exon

TPAU_RS21380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21380
old locus tag: Tpau_4282
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAGPQTAWDAIRARIPLTPPWSIDELLAWVAEDTGRVVDLQPWAESANVDRARTHCGVVAGYADRWVIRFDGRRSRTSRLQTIGHEIGHILAGHGAGEGRSLIDASTAQLTYGLNLDGLRYVLGRSSYSDAAEAEAEFIGSKLASYTVGDLGHAGAHGRLRTTFQ
SIO_010081: TPAU_RS21380
subclass of: SO_0000673
so part of: TPAU_RS21380
location: complement(34273..34770)
location: region:34273-34770:-1
so has part: feature:34273-34770:-1:exon

WP_013128833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34273-34770:-1:exon

TPAU_RS21385
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21385
old locus tag: Tpau_4283
so part of: sequence
location: 35417..37513
location: region:35417-37513:1
so has part: feature:35417-37513:1:exon
subclass of: SO_0000010

position:35417:1
position: 35417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37513:1
position: 37513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35417-37513:1:exon

TPAU_RS21385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21385
old locus tag: Tpau_4283
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVGVSPDAAWDFTRAMSLRSHVRGLTADGYSEFISCDGAAPSGVWAVYLTDARLRYRLLGFDFDAKGDTAEIAAVARTAAQHSADQLVSMLQECGIEHVVCESGPSGGRHVWVGLATPLSVEYVSALADLARTVFGRVQASGEWVLDIGMLSNRKTGLLRPPGAPHAAGGASTVIAGDPTVLLPDARSTTRQQVDALVQLLQEAKAALPADAGDPIDGGGHQRSVTVAEAPDGHLWIPGTFRELSGPALAKVHAPITASTDASDVLFSILCSCARAHWSFTDVHTRLAGLPGLEHARTRRSKHHPGTRERRPRKGSQSPKQVLAADWRRAIAYLADHSTTSEDHDLPDDPDFARRTAAICQATTGIRQRADANMRRWSIRGGAADRLVLDALCEIADNVVQLTIGADVRTLAEMAGITRERSRNALHRLSRDGWITLAAEHTGPHAAVWTLNNNNNNTTPQPAEVPTATPTETAPERGPHVDREQSTTRVSLGAIGPEEPTPPAAEGPPAEDGPSRRRRQLREAAAARELATHDCFTGTGEEGLSTWDGLVYARIPVAPTALEEVLPCSTPSEVSSAAVQALHSSGLIDIDASGRVYRVHEAARASYAQWVGTTGTLDTRKEQHRIERELWAWWLDEITWTTTSRTTVRGTGYRSARRRPDQHSLDLGLARWTDRAPYPRRSGGRRDHRAARASLRAT
SIO_010081: TPAU_RS21385
subclass of: SO_0000673
so part of: TPAU_RS21385
location: 35417..37513
location: region:35417-37513:1
so has part: feature:35417-37513:1:exon

WP_013128834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35417-37513:1:exon

TPAU_RS21395
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21395
old locus tag: Tpau_4284
so part of: sequence
location: 37941..39206
location: region:37941-39206:1
so has part: feature:37941-39206:1:exon
subclass of: SO_0000010

position:37941:1
position: 37941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39206:1
position: 39206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37941-39206:1:exon

TPAU_RS21395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21395
old locus tag: Tpau_4284
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014927224.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MDDGREPTQQELDLARELVASAKEQGASMSAPGMLKALTKMMLETALDEEITEHLGYDKHQVEGRGSGNSRNGARVKTVITETVGPVQIEVPRDRDGSFDPQIFRKHQRRLNGVDEIVLSLAARGLTSGEIVAHFDQIYGASISKDTISRITDKVVEEMNAWFNRPLEPIYVAVFIDALHIKVRDGQVANRPFYAAIGVDLDGHKDVLEIWAGEGAGESAKFWYAVLTNLKARGVNDVFFLVCDGLTGLPASVAAVWPDTIVQTCVIHLLRNSFKYVPRQHWDALKRDLKPIYTAPNAAAADEALTELDERWGQKYPTMIRLWQGAWDEFIPFLDYNIEVRRVLYSTNAIESLNARYRRAVKARGHFPTEQSALKTLYLVTRALDPSGRGQNRWAARWKPALNAFAITFADRIPDLNRDRG
SIO_010081: TPAU_RS21395
subclass of: SO_0000673
so part of: TPAU_RS21395
location: 37941..39206
location: region:37941-39206:1
so has part: feature:37941-39206:1:exon

WP_245537960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37941-39206:1:exon

TPAU_RS21400
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21400
old locus tag: Tpau_4285
so part of: sequence
location: complement(39837..40601)
location: region:39837-40601:-1
so has part: feature:39837-40601:-1:exon
subclass of: SO_0000010

position:39837:-1
position: 39837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40601:-1
position: 40601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39837-40601:-1:exon

TPAU_RS21400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21400
old locus tag: Tpau_4285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGHDRQDRFPDDHVPGGNAGRPWQPRGDLGDLDPDALFGAFGQPLTDGPTIEWMPGMADQMLRELAPLLAEDGIDITADALDTDLATLQAALDRAVARHNHTLATPTGEQRSWCTSTLRLLAESIDTDNLDLAEGILETVPPESPDGKATVAGVIGVGAQLLDSWLTTPPAGINKTAAATIVIRPPRWHGERAAIDLLALARKNKAHLSHGKIIAAHGGHTTLYGTALAVTAVLAAWADHTKTTVTNLAGTHLR
SIO_010081: TPAU_RS21400
subclass of: SO_0000673
so part of: TPAU_RS21400
location: complement(39837..40601)
location: region:39837-40601:-1
so has part: feature:39837-40601:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39837-40601:-1:exon

TPAU_RS21405
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21405
old locus tag: Tpau_4286
so part of: sequence
location: complement(40650..41954)
location: region:40650-41954:-1
so has part: feature:40650-41954:-1:exon
subclass of: SO_0000010

position:40650:-1
position: 40650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41954:-1
position: 41954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40650-41954:-1:exon

TPAU_RS21405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21405
old locus tag: Tpau_4286
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014358297.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MLAVVENKRDGSGETGDSEAPRSLLDEIVRDGARRMLAAALEAEVAAYVASCAGEVDEAGRRLVVRNGHHAAREVVTAAGAVPVKAPRVNDKRVDEVTGERRRFSSSILPAWARKSTQVAEVLPLLYLHGLSTSDFTPALTQFLGTSAGLSPATITRLTRDWQAEAAAFGTRSLAETDYVYVWADGIHLKVRLAQEKVCLLVLIGVRADGSKELIALDDGYRESTQSWLDLLRSCKRRGMRSPVLAVGDGALGFWAALREVFPETREQRCWFHKIANVINALPKSVQRSAKAALTEIWNAQDREHAEKAARVFVADYAAKWPKAAAKITDDLDVLLAFYDYPAEHWVHLRTTNPIESTFATVRLRTKVTKGPGSRAAGIAMAFKLIQAAQTRWRAVNAPHLVALVRAGARFDQGRLVERAATTPETTAADDAAA
SIO_010081: TPAU_RS21405
subclass of: SO_0000673
so part of: TPAU_RS21405
location: complement(40650..41954)
location: region:40650-41954:-1
so has part: feature:40650-41954:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40650-41954:-1:exon

TPAU_RS21410
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21410
old locus tag: Tpau_4287
so part of: sequence
location: complement(42086..43351)
location: region:42086-43351:-1
so has part: feature:42086-43351:-1:exon
subclass of: SO_0000010

position:42086:-1
position: 42086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43351:-1
position: 43351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42086-43351:-1:exon

TPAU_RS21410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21410
old locus tag: Tpau_4287
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019971498.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MDDGRQPTEQELQLARELVAQAREQGASMSAPGMLRALTKTMLETALDEEITEHLGYDKHHIEGRGSGNSRNGARTKTVITETVGPIEIEVPRDREGSFDPKIVAKHQRRLNGVDEIVLSLAARGLTSGDIVAHFDQIYGASISKDTISRITDKIVEEMTGWFNRPLEPIYVAVFIDALHIKVRDGQVANRPFYAAIGVDLDGHKDVLGIWAGEGGGESAKFWYAVLSSLKSRGVNDVFFLVCDGLKGLPASVAAVWPETIVQTCVIHLLRNSFKYVPRQHWDTLKRDLKPIYTAIDATAAEAALDALDDTWGQKYPTMIRLWRNAWDEFIPFLDYNIEVRRVLYSTNAIESLNARYRRAVKARGHFPTEQAALKTLYLVTRALDPSGRGQNRWAARWKPALNAFAITFADRIPGLNRDQG
SIO_010081: TPAU_RS21410
subclass of: SO_0000673
so part of: TPAU_RS21410
location: complement(42086..43351)
location: region:42086-43351:-1
so has part: feature:42086-43351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42086-43351:-1:exon

TPAU_RS21415
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21415
old locus tag: Tpau_4288
so part of: sequence
location: complement(43536..44516)
location: region:43536-44516:-1
so has part: feature:43536-44516:-1:exon
subclass of: SO_0000010

position:43536:-1
position: 43536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44516:-1
position: 44516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43536-44516:-1:exon

TPAU_RS21415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21415
old locus tag: Tpau_4288
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010549889.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-binding protein
translation: MRILVVGASGYIASRTIPLLLEAGHEVVAAARTPAKLDRFWWREQVTARPLDVLDDESVRSALTKDLDALIYLVHGMAGDAFQDTDRQAATAVRAAADTVGIDRLVYVSGIIPDTAGDDLSDHLQSRLEVEQILNQTHGTTITLRAAMIIGAGSTSYSLMSQLARRLPVTVLPDWMNHLVEPLAVADLVAAITGALTAPSAGSNRYFDIGGGEQLPYPDLIARYLAANNLERPSIRVPLVPQTLVGQIAARVADVPNPTVRALIESLSKDMVATDRRWIGELVGPSYTPTTIAEGLRRAEQPIDYLTAPSQRDSLQALPGGPYWTR
SIO_010081: TPAU_RS21415
subclass of: SO_0000673
so part of: TPAU_RS21415
location: complement(43536..44516)
location: region:43536-44516:-1
so has part: feature:43536-44516:-1:exon

WP_013128836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43536-44516:-1:exon

TPAU_RS22130
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS22130
old locus tag: Tpau_4289
so part of: sequence
location: 44539..45243
location: region:44539-45243:1
so has part: feature:44539-45243:1:exon
subclass of: SO_0000010

position:44539:1
position: 44539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45243:1
position: 45243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44539-45243:1:exon

TPAU_RS22130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS22130
old locus tag: Tpau_4289
EC number: 3.4.-.-
inference: COORDINATES: protein motif:HMM:NF014566.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0071586 - CAAX-box protein processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CPBP family intramembrane metalloprotease
translation: MGMPDLKGDRARWAAVLAVVIAVVGAVLLRATFAATSSGGPLPPVSAAVAATWLIGGIVVVAAASTTRPPDTTEPSVRFLLRALRQPPTRMQGFPVAAAVAVGLAFAIVCVIGALTLLRFPWTAQWVSAALTTARGDAAIVFSVALATGAAEEVFFRIGLRSVLPARWYVLASTVIYGVVTAATGNGALVIASILLGLVAAQMYYWFPRWYVPVIIHALWTVGVIGIFPTLSSY
SIO_010081: TPAU_RS22130
subclass of: SO_0000673
so part of: TPAU_RS22130
location: 44539..45243
location: region:44539-45243:1
so has part: feature:44539-45243:1:exon

WP_160160299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44539-45243:1:exon

TPAU_RS21425
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21425
old locus tag: Tpau_4290
so part of: sequence
location: complement(45265..46644)
location: region:45265-46644:-1
so has part: feature:45265-46644:-1:exon
subclass of: SO_0000010

position:45265:-1
position: 45265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46644:-1
position: 46644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45265-46644:-1:exon

TPAU_RS21425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21425
old locus tag: Tpau_4290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010533564.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Orn/DAP/Arg decarboxylase 2
translation: MPENSVSANAQLRFRAHGEPAVPGRLVRWQVDLLRDWATLHQLIEEHGSPVNVINPAPLAGHAGELIAAAQEARVDLRVYFARKANKALALVEAALAAGHGIDVASEQELRQVLAFNPQPDRIILTAAVKPNALLKLAVNSGVVISIDNGDELAALVRVIAECKHREDVPVALRIAAELPGAAPSRFGMAQEQIREILNNFPGQLALSGFHFHLHGYSAEHRSEALAQALDLIATARHQQHRPTFIDIGGGIPMRYLDTPATWDAYQQSTKSSDLSAFWAAKAPENVYPMWQELVRGAWLASVLSAPGLAQRIADAGIRLHAEPGRCLLDGCGLTVARVEFRKQRSDGTWLIGLAMNRTQLRSAADDFILDPILIPAPERAPTPPISGFLVGAYCIEAELITRRRITFPEGVAVGDLIAFTNTAGYLMHILESASHQIPLAHNIVLKEGRWRRDQIDQP
SIO_010081: TPAU_RS21425
subclass of: SO_0000673
so part of: TPAU_RS21425
location: complement(45265..46644)
location: region:45265-46644:-1
so has part: feature:45265-46644:-1:exon

WP_013128838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45265-46644:-1:exon

TPAU_RS23660
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS23660
so part of: sequence
location: complement(46659..47378)
location: region:46659-47378:-1
so has part: feature:46659-47378:-1:exon
subclass of: SO_0000010

position:46659:-1
position: 46659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47378:-1
position: 47378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46659-47378:-1:exon

TPAU_RS23660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS23660
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLNSMRWLPAIARTRAKQLATEDTALVVNDAAAQILVRIGGDETRRTDDPRAWLERDLLIAHGARPPDLLWAQGQAWKALYPHLIERHLRLQQSGGAPPEGWTNFSKLCQAMEPLAFGPPAINAEKMLALVHAGVLSIDAGTTPPRADLVIDAVLAPAGLPDSTDSLWHSLREQGLIERATDRDAVAIDLDATVLVGGERIEGLAVFGRSVEGVVLGTDTLNHVLHPHLHRWAAQLRRT
SIO_010081: TPAU_RS23660
subclass of: SO_0000673
so part of: TPAU_RS23660
location: complement(46659..47378)
location: region:46659-47378:-1
so has part: feature:46659-47378:-1:exon

WP_245537959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46659-47378:-1:exon

TPAU_RS21435
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21435
old locus tag: Tpau_4292
so part of: sequence
location: complement(48092..49186)
location: region:48092-49186:-1
so has part: feature:48092-49186:-1:exon
subclass of: SO_0000010

position:48092:-1
position: 48092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49186:-1
position: 49186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48092-49186:-1:exon

TPAU_RS21435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21435
old locus tag: Tpau_4292
inference: COORDINATES: protein motif:HMM:NF012512.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxal-phosphate dependent enzyme
translation: MTGRAEPRAPAQQLPPPAILSCIRQVTGHALSALPRATPLVRFAHLLAPSPTYLSAKLESFNPSGSAKDRTARALLRSGFESGDLRRGDHVVESSSGNLGVALAQQCLTLGLSFTCVVDPRTNRSTRALISAYGGHIVDVEQPDPVSGDFLQARITAVEQIVREMAETGVHAWWPNQYANVANIRAHAEGTMREIAESPSGPPDVLVVATSTTGTLQGCMRYAKEHSLDTRFVAVDAVGSVLFDGDRGCRALPGFGAGVAPALAASAAPDQVIKVSALDSVVGCRRLVQREGYLAGASGGAVVAAVEHFDVDRDESICMVLHDGGERYLDTVYSDSWVQTELGCDAAELTARVQAAPGTWGALR
SIO_010081: TPAU_RS21435
subclass of: SO_0000673
so part of: TPAU_RS21435
location: complement(48092..49186)
location: region:48092-49186:-1
so has part: feature:48092-49186:-1:exon

WP_013128840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48092-49186:-1:exon

TPAU_RS21440
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21440
old locus tag: Tpau_4293
so part of: sequence
location: complement(49646..51019)
location: region:49646-51019:-1
so has part: feature:49646-51019:-1:exon
subclass of: SO_0000010

position:49646:-1
position: 49646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51019:-1
position: 51019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49646-51019:-1:exon

TPAU_RS21440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21440
old locus tag: Tpau_4293
inference: COORDINATES: protein motif:HMM:NF024589.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MVQPSPYTPGAIARQVPGRDQELADYQERLSFMAATQSLVPRIRIDRGPRGLGKTSMLRAAETMAEQQFNALSVWVVAGEGSLLSAIARSAERAVADVTGDRGGERGRLSERLTVKFGLSVPGVGSAEATVAPRAREREGEGPVDTWDLQDLLTEVRDKVRKQRPGGVVVFVDEIQQGDPASLRTLSYTWQNLQARRPDLPVALFGAGLPTSTAVINKAVMNAERFDYRTLGGLSDDAAAIALAAPAQQRGVQWTPEALRRAVAIADGYPYTVQLIGEHTWAAAGRPDPGALITVEHVEHGQALVDRSMQQIYEARLDRASTPAQQEFVMTMAQLGNGPVPRAAIAQQLGVSSTGLSTTRDELLEAGVITEAGRGMLTFGLPGFAEYIRDEHGLELLPAPARSIRGRSALNASLGRTATGRSGESGGVSGGTATPPAVQSHRRSPETPGASHDGPSL
SIO_010081: TPAU_RS21440
subclass of: SO_0000673
so part of: TPAU_RS21440
location: complement(49646..51019)
location: region:49646-51019:-1
so has part: feature:49646-51019:-1:exon

WP_013128841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49646-51019:-1:exon

TPAU_RS21445
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21445
old locus tag: Tpau_4294
so part of: sequence
location: 51276..51626
location: region:51276-51626:1
so has part: feature:51276-51626:1:exon
subclass of: SO_0000010

position:51276:1
position: 51276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51626:1
position: 51626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51276-51626:1:exon

TPAU_RS21445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21445
old locus tag: Tpau_4294
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFDPRVWHERNPPRPVRVDISKAFPNLARAATRADRLPLWLRSAGVRLELTMDGEVLGVCRLIDGQWLINVRIRPRIGGDGVASMPLWVQESAVEAWPSGRGNDRPTGADRASRHS
SIO_010081: TPAU_RS21445
subclass of: SO_0000673
so part of: TPAU_RS21445
location: 51276..51626
location: region:51276-51626:1
so has part: feature:51276-51626:1:exon

WP_013128842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51276-51626:1:exon

TPAU_RS21450
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21450
old locus tag: Tpau_4295
so part of: sequence
location: 51999..52796
location: region:51999-52796:1
so has part: feature:51999-52796:1:exon
subclass of: SO_0000010

position:51999:1
position: 51999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52796:1
position: 52796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51999-52796:1:exon

TPAU_RS21450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21450
old locus tag: Tpau_4295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006897767.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MTSSTPVYAIANQKGGVGKSATVLGLAGAISHAGGRALLIDLDPQANITTGLGVEVEEDTPTMADLLAEYAEGSALDIRVKTPWPGIDLLPADLGLANRDTDGAPDVPYRLRAAFENVDLSEYDAVLIDCPPSLGRLLLNGLYYADGMILATEAMVDSVRGIENIVKTSNFVQKQVNTKLAIKAIVITRREKNGEQDFRESELRESYGSLPDGGLVARTVTPKRAAWGDAHGTGQSVFNLRGDGPMALQIAFTDLATELDLIRTK
SIO_010081: TPAU_RS21450
subclass of: SO_0000673
so part of: TPAU_RS21450
location: 51999..52796
location: region:51999-52796:1
so has part: feature:51999-52796:1:exon

WP_013128843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51999-52796:1:exon

TPAU_RS21455
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21455
old locus tag: Tpau_4296
so part of: sequence
location: 52809..53156
location: region:52809-53156:1
so has part: feature:52809-53156:1:exon
subclass of: SO_0000010

position:52809:1
position: 52809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53156:1
position: 53156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52809-53156:1:exon

TPAU_RS21455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21455
old locus tag: Tpau_4296
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPPIERKKVTKRHEQHPAEALAAPGPAEPAAAPAAPEQPPVAPAPRPASAPVRAAGEEVPPAAEPKVPSSFRLPRTLLDRLDAGAVKIPAILGRRVSKNQLVENALDEYLSRYGL
SIO_010081: TPAU_RS21455
subclass of: SO_0000673
so part of: TPAU_RS21455
location: 52809..53156
location: region:52809-53156:1
so has part: feature:52809-53156:1:exon

WP_013128844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52809-53156:1:exon

TPAU_RS22755
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS22755
so part of: sequence
location: 53486..53698
location: region:53486-53698:1
so has part: feature:53486-53698:1:exon
subclass of: SO_0000010

position:53486:1
position: 53486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53698:1
position: 53698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53486-53698:1:exon

TPAU_RS22755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS22755
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNMHVSTRKAPPAAAAATCPWCGSSVATTAWPGETERVYADHPLPAPHGRLRCPASGLTRSEVEPPGGPR
SIO_010081: TPAU_RS22755
subclass of: SO_0000673
so part of: TPAU_RS22755
location: 53486..53698
location: region:53486-53698:1
so has part: feature:53486-53698:1:exon

WP_041945393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53486-53698:1:exon

TPAU_RS21465
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21465
old locus tag: Tpau_4297
so part of: sequence
location: 53695..54879
location: region:53695-54879:1
so has part: feature:53695-54879:1:exon
subclass of: SO_0000010

position:53695:1
position: 53695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54879:1
position: 54879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53695-54879:1:exon

TPAU_RS21465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21465
old locus tag: Tpau_4297
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016888190.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MTAPSDDFTSRDATVVRSTPGDAVALPPEIVARMAEVVEHAQASGTSQAYHAAWVRFEDWCTRHGYTALPARPEVIAAYLVVARDTVTQAGRRAYAPSTLSKWVSAIADRHRRAGITDLPTRHELVRATLAGIKREYATAGERPRQPRAPLLTDDVMDLVTTAREQVLGWADAVVERRDSALLLVGLTTSIRRSELVALVGDDVELHRADGLHVTVTRSKTDQEGEGRLHPAPRAEDPRRCPACAAVRWAEVVAASDRYGRRGVIRLLTGAPSLEATGHVCASTDQLVGRWVAARRPFFRSIRRNGLVGEQALAASSVHAIVRRRAERAGIDPAVVEQLGAHSLRSGHVSQALRNGATFEEVMAQTGHTNVATVLRYRHETAPLVANSVTKLGL
SIO_010081: TPAU_RS21465
subclass of: SO_0000673
so part of: TPAU_RS21465
location: 53695..54879
location: region:53695-54879:1
so has part: feature:53695-54879:1:exon

WP_013128845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53695-54879:1:exon

TPAU_RS21470
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21470
old locus tag: Tpau_4298
so part of: sequence
location: 54876..55859
location: region:54876-55859:1
so has part: feature:54876-55859:1:exon
subclass of: SO_0000010

position:54876:1
position: 54876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55859:1
position: 55859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54876-55859:1:exon

TPAU_RS21470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21470
old locus tag: Tpau_4298
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTVDDLGVRERAVWTLWSDWCAAIDEPAMPTPPVALARFIAANPAAPRTQRRRVAVINGVHRRAGHRPPGIAEEVREAIDVTRAARRRHLIDLAVDVAAHLPDGWPAALFARRDALLLVLATSGIGPTALSRLTAGALYVDDETDELRITAAGGEEFTTAPDLQNAGVSPAAVLEAWLRLRALQHHVPSPSITATALRGEPVPAVPAVPDGAPMFTPLDGWGAPPLDTTTHLSASAIGALLRALLAGGAPAHRHIAPRPTPAGEPAATEYPEPAPLDPSSWDRGLAARRAAQGTLADVDDVLDDVDARAGKLLEELLQLLDDATAP
SIO_010081: TPAU_RS21470
subclass of: SO_0000673
so part of: TPAU_RS21470
location: 54876..55859
location: region:54876-55859:1
so has part: feature:54876-55859:1:exon

WP_013128846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54876-55859:1:exon

TPAU_RS21475
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21475
old locus tag: Tpau_4299
so part of: sequence
location: 56220..56417
location: region:56220-56417:1
so has part: feature:56220-56417:1:exon
subclass of: SO_0000010

position:56220:1
position: 56220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56417:1
position: 56417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56220-56417:1:exon

TPAU_RS21475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21475
old locus tag: Tpau_4299
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016894089.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPAMNVEFTEDELAAVRSAASDAGSSMRAFAKQAILDKARNREGLVRAIAARTAERSAELNRRLA
SIO_010081: TPAU_RS21475
subclass of: SO_0000673
so part of: TPAU_RS21475
location: 56220..56417
location: region:56220-56417:1
so has part: feature:56220-56417:1:exon

WP_013128847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56220-56417:1:exon

TPAU_RS21480
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21480
old locus tag: Tpau_4300
so part of: sequence
location: 56414..56809
location: region:56414-56809:1
so has part: feature:56414-56809:1:exon
subclass of: SO_0000010

position:56414:1
position: 56414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56809:1
position: 56809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56414-56809:1:exon

TPAU_RS21480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21480
old locus tag: Tpau_4300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011896032.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MTDFPTADEVLIAAEYACGFRPISGDPGLFESSIMRASATVFGQDAYPSVWDKAAALLHSLVTTQALADGNKRTGWAGCWLLLGLNGYSVSNTLDPDAAEQFVLAIAANELTWEQISARLPEFAAAGQESN
SIO_010081: TPAU_RS21480
subclass of: SO_0000673
so part of: TPAU_RS21480
location: 56414..56809
location: region:56414-56809:1
so has part: feature:56414-56809:1:exon

WP_013128848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56414-56809:1:exon

TPAU_RS23280
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS23280
old locus tag: Tpau_4301
so part of: sequence
location: 57070..57246
location: region:57070-57246:1
so has part: feature:57070-57246:1:exon
subclass of: SO_0000010

position:57070:1
position: 57070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57246:1
position: 57246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57070-57246:1:exon

TPAU_RS23280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS23280
old locus tag: Tpau_4301
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKTIPSVNQLKKAIDPEVWKVRYEDLPNIGAQWSWERRRDSSTKAAERVHPLLSARA
SIO_010081: TPAU_RS23280
subclass of: SO_0000673
so part of: TPAU_RS23280
location: 57070..57246
location: region:57070-57246:1
so has part: feature:57070-57246:1:exon

WP_013128849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57070-57246:1:exon

TPAU_RS21485
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21485
old locus tag: Tpau_4302
so part of: sequence
location: 57715..58137
location: region:57715-58137:1
so has part: feature:57715-58137:1:exon
subclass of: SO_0000010

position:57715:1
position: 57715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58137:1
position: 58137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57715-58137:1:exon

TPAU_RS21485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21485
old locus tag: Tpau_4302
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNIEDTVQLDEAGQYDPAAETALSTDEVTLLRLRTDGPRGVLAVDLLARGEDDTLICVTKPGPGEFWGRFFIGTGSPLREVKVHMMDGRWGRLIETAEGDFTTPEPLGPHGARFAGRPFTLMDAKGLDGVPTPAGLVLR
SIO_010081: TPAU_RS21485
subclass of: SO_0000673
so part of: TPAU_RS21485
location: 57715..58137
location: region:57715-58137:1
so has part: feature:57715-58137:1:exon

WP_013128850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57715-58137:1:exon

TPAU_RS21490
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21490
old locus tag: Tpau_4303
so part of: sequence
location: complement(58257..59021)
location: region:58257-59021:-1
so has part: feature:58257-59021:-1:exon
subclass of: SO_0000010

position:58257:-1
position: 58257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59021:-1
position: 59021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58257-59021:-1:exon

TPAU_RS21490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21490
old locus tag: Tpau_4303
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGHDRQDRFPDDHVPGGNAGRPWQPRGDLGDLDPDALFGAFGQPLTDGPTIEWMPGMADQMLRELAPLLAEDGIDITADALDTDLATLQAALDRAVARHNHTLATPTGEQRSWCTSTLRLLAESIDTDNLDLAEGILETVPPESPDGKATVAGVIGVGAQLLDSWLTTPPAGINKTAAATIVIRPPRWHGERAAIDLLALARKNKAHLSHGKIIAAHGGHTTLYGTALAVTAVLAAWADHTKTTVTNLAGTHLR
SIO_010081: TPAU_RS21490
subclass of: SO_0000673
so part of: TPAU_RS21490
location: complement(58257..59021)
location: region:58257-59021:-1
so has part: feature:58257-59021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58257-59021:-1:exon

TPAU_RS21495
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21495
old locus tag: Tpau_4304
so part of: sequence
location: complement(59070..60374)
location: region:59070-60374:-1
so has part: feature:59070-60374:-1:exon
subclass of: SO_0000010

position:59070:-1
position: 59070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60374:-1
position: 60374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59070-60374:-1:exon

TPAU_RS21495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21495
old locus tag: Tpau_4304
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014358297.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MLAVVENKRDGSGETGDSEAPRSLLDEIVRDGARRMLAAALEAEVAAYVASCAGEVDEAGRRLVVRNGHHAAREVVTAAGAVPVKAPRVNDKRVDEVTGERRRFSSSILPAWARKSTQVAEVLPLLYLHGLSTSDFTPALTQFLGTSAGLSPATITRLTRDWQAEAAAFGTRSLAETDYVYVWADGIHLKVRLAQEKVCLLVLIGVRADGSKELIALDDGYRESTQSWLDLLRSCKRRGMRSPVLAVGDGALGFWAALREVFPETREQRCWFHKIANVINALPKSVQRSAKAALTEIWNAQDREHAEKAARVFVADYAAKWPKAAAKITDDLDVLLAFYDYPAEHWVHLRTTNPIESTFATVRLRTKVTKGPGSRAAGIAMAFKLIQAAQTRWRAVNAPHLVALVRAGARFDQGRLVERAATTPETTAADDAAA
SIO_010081: TPAU_RS21495
subclass of: SO_0000673
so part of: TPAU_RS21495
location: complement(59070..60374)
location: region:59070-60374:-1
so has part: feature:59070-60374:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59070-60374:-1:exon

TPAU_RS21500
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21500
old locus tag: Tpau_4305
pseudo: true
so part of: sequence
location: <60688..60900
location: region:60688-60900:1
so has part: feature:60688-60900:1:exon
subclass of: SO_0000010

position:60688:1
position: 60688
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:60900:1
position: 60900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60688-60900:1:exon

TPAU_RS21500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21500
old locus tag: Tpau_4305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008376397.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: CoA-disulfide reductase
SIO_010081: TPAU_RS21500
subclass of: SO_0000673
so part of: TPAU_RS21500
location: <60688..60900
location: region:60688-60900:1
so has part: feature:60688-60900:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60688-60900:1:exon

TPAU_RS21505
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21505
old locus tag: Tpau_4306
so part of: sequence
location: 61126..62634
location: region:61126-62634:1
so has part: feature:61126-62634:1:exon
subclass of: SO_0000010

position:61126:1
position: 61126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62634:1
position: 62634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61126-62634:1:exon

TPAU_RS21505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21505
old locus tag: Tpau_4306
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009681132.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015103 - inorganic anion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SulP family inorganic anion transporter
translation: MAVQTRAKEAVQGSDVVAALRSPKRLETESLAGLVVALALIPEAISFSIIAGVDPRVGLFASFTMAVTIAIVGGRPAMISAATGAIALVVAPIAREHGLDYLLATVILAGILQVVLSALGVAKLMRFIPRSVMVGFVNALAILIFLAQVPHMTDVPWLVYPMIAAGLVIMVGLPKLSNAVPAPLVAIVLLTAVTMAFGLGVPNVGDEGELPSTLPQWLIPDVPHNLETLKLIAPYAIAMALVGLLESLMTAKLVDDITDTHSDKTREGWGQGVANVVTGFFGGMGGCAMIGQTMINVKSSGARTRISTFLAGLFLLILVVGLGDLVAQIPMAALVAVMVMVAVGTFDWHSIAPATLRRMPRSETAVMIVTVVITVATHNLAYGVIGGVIVATLLFVRRVAHFTEVTPAVASDDAGTRTYRVRGELFFASSNDLVYQFDYVDDPEHVIVDLSDTHVWDASTVAALDAIETKYRNKGKTVEFVGLNPASAERHGRLSGHLGGEH
SIO_010081: TPAU_RS21505
subclass of: SO_0000673
so part of: TPAU_RS21505
location: 61126..62634
location: region:61126-62634:1
so has part: feature:61126-62634:1:exon

WP_013128851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61126-62634:1:exon

TPAU_RS21510
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21510
old locus tag: Tpau_4307
so part of: sequence
location: 62645..63070
location: region:62645-63070:1
so has part: feature:62645-63070:1:exon
subclass of: SO_0000010

position:62645:1
position: 62645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63070:1
position: 63070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62645-63070:1:exon

TPAU_RS21510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21510
old locus tag: Tpau_4307
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019548720.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MerR family transcriptional regulator
translation: MADEPEGGRLLQIGQVAEATGLSLKTIRHYDEMGLVVPSERSPGGFRLYTAADVGRLLVIRRMKPLGFTLEQMRDLLAALDTLAALDTLADPAATTAVRADATAFVDQCSDAAQQRCAELRAQLAIAEEFANTLTALAGRH
SIO_010081: TPAU_RS21510
subclass of: SO_0000673
so part of: TPAU_RS21510
location: 62645..63070
location: region:62645-63070:1
so has part: feature:62645-63070:1:exon

WP_013128852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62645-63070:1:exon

TPAU_RS21515
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21515
old locus tag: Tpau_4308
so part of: sequence
location: complement(63125..63712)
location: region:63125-63712:-1
so has part: feature:63125-63712:-1:exon
subclass of: SO_0000010

position:63125:-1
position: 63125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63712:-1
position: 63712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63125-63712:-1:exon

TPAU_RS21515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21515
old locus tag: Tpau_4308
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017623893.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MAERVDHAVRRRQIAEAAASVAAEQGLHAVSMRTTAVAAGMSVTLVQYYFTNKQGLLLGLMNHLEQLSIQRWHDRIQAANAGGGRTVLDAFLAEAIPDDEASRVFHLVGTSFAMLAVTDPALKDGAAGLTRLETDVEEAFRQADVESLSRDPAVEAYRLVALVNGLGTSVLLGHRTATQALDVASMHLDDVLAGT
SIO_010081: TPAU_RS21515
subclass of: SO_0000673
so part of: TPAU_RS21515
location: complement(63125..63712)
location: region:63125-63712:-1
so has part: feature:63125-63712:-1:exon

WP_013128853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63125-63712:-1:exon

TPAU_RS21520
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
gene: istA
locus tag: TPAU_RS21520
old locus tag: Tpau_4310
pseudo: true
so part of: sequence
location: 64050..65760
location: region:64050-65760:1
so has part: feature:64050-65760:1:exon
subclass of: SO_0000010

position:64050:1
position: 64050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65760:1
position: 65760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64050-65760:1:exon

TPAU_RS21520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
gene: istA
locus tag: TPAU_RS21520
old locus tag: Tpau_4310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013124930.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: TPAU_RS21520
subclass of: SO_0000673
so part of: TPAU_RS21520
location: 64050..65760
location: region:64050-65760:1
so has part: feature:64050-65760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64050-65760:1:exon

TPAU_RS21525
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21525
old locus tag: Tpau_4311
pseudo: true
so part of: sequence
location: <65778..66263
location: region:65778-66263:1
so has part: feature:65778-66263:1:exon
subclass of: SO_0000010

position:65778:1
position: 65778
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:66263:1
position: 66263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65778-66263:1:exon

TPAU_RS21525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21525
old locus tag: Tpau_4311
inference: COORDINATES: similar to AA sequence:RefSeq:WP_041767551.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: TPAU_RS21525
subclass of: SO_0000673
so part of: TPAU_RS21525
location: <65778..66263
location: region:65778-66263:1
so has part: feature:65778-66263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65778-66263:1:exon

TPAU_RS22635
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS22635
old locus tag: Tpau_4312
so part of: sequence
location: complement(66299..66802)
location: region:66299-66802:-1
so has part: feature:66299-66802:-1:exon
subclass of: SO_0000010

position:66299:-1
position: 66299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66802:-1
position: 66802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66299-66802:-1:exon

TPAU_RS22635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS22635
old locus tag: Tpau_4312
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013127949.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MspA family porin
translation: MDGKGEATITSTGGKDLQSASVEVGYVVACGVKDGGFESWIGTNQTIGGHLDTTVGVGAAGALGGPIPAGGVGVGGSVNPGTSGQLGMSQNQVIKTAPGEIKYFPAGTKQIDKPKSGETFGVRFGEKRISVEGCIGSVDAVAYATTTVSSRNFDDAKTVYSEVMRFA
SIO_010081: TPAU_RS22635
subclass of: SO_0000673
so part of: TPAU_RS22635
location: complement(66299..66802)
location: region:66299-66802:-1
so has part: feature:66299-66802:-1:exon

WP_245537957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66299-66802:-1:exon

TPAU_RS23665
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS23665
so part of: sequence
location: complement(66822..68063)
location: region:66822-68063:-1
so has part: feature:66822-68063:-1:exon
subclass of: SO_0000010

position:66822:-1
position: 66822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68063:-1
position: 68063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66822-68063:-1:exon

TPAU_RS23665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS23665
inference: COORDINATES: protein motif:HMM:NF024991.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MLLTPDREPDPGHAAARLRGAHLHRRGRADVHQRPRHQHRKPSHRGHQDAGRLHVDRHRLRCRACPGPRAGRFEPSAEQRALARHFTHTGTLLAVGVGPAGTGKTTSLKLAAEVWQLGGGRVVALSHQGAAAADILAAEISSPGHAIVGNTIAMLELGKVDVCAGDMLLIDEPGMASRDQLDRIVALAASQDAVVRLLGDPQQLPSIEAGGTLGLLAAATDAPSLHEVRRFNNPEEGDITPAVARRRHLRRLLVHGKDPRPGHHHPRLRLRQGPPGPPGHPRHHHPRSGRHHRRSQGRCLELMDEPAWSSLQPKLDRVQRMASGDPGSPPPAHYPPNHRSRRHPRRALPAPHRQPQRRPEITTHAACSAATHESTPRRSEDTARVLAAYKAISERAVPNARDTGLSVPAPGGR
SIO_010081: TPAU_RS23665
subclass of: SO_0000673
so part of: TPAU_RS23665
location: complement(66822..68063)
location: region:66822-68063:-1
so has part: feature:66822-68063:-1:exon

WP_160160301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66822-68063:-1:exon

TPAU_RS23670
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS23670
so part of: sequence
location: 68167..68412
location: region:68167-68412:1
so has part: feature:68167-68412:1:exon
subclass of: SO_0000010

position:68167:1
position: 68167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68412:1
position: 68412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68167-68412:1:exon

TPAU_RS23670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS23670
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHRGLDVPAVPRGFVVREAVDNLGGNHPRVGGGRVDGDHPTRQRRGIGGLSEGAVDELARLLRSAEEGVRMVGPLGSHLPQ
SIO_010081: TPAU_RS23670
subclass of: SO_0000673
so part of: TPAU_RS23670
location: 68167..68412
location: region:68167-68412:1
so has part: feature:68167-68412:1:exon

WP_041945397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68167-68412:1:exon

TPAU_RS21550
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21550
old locus tag: Tpau_4315
so part of: sequence
location: complement(68915..69733)
location: region:68915-69733:-1
so has part: feature:68915-69733:-1:exon
subclass of: SO_0000010

position:68915:-1
position: 68915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69733:-1
position: 69733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68915-69733:-1:exon

TPAU_RS21550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21550
old locus tag: Tpau_4315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007322952.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MTRTIERRHAAPSRSGLGAAVRSELAKLSWRAPSVAVAAPLAVLIPVLINLAIAEAAARNKINGAGGMQTNNVAYWVLMFSTFILMAGAVYSTSAEFGNGTVDLVFARQPRRWLLPVAKALVFGAIAVVTSAITVAILLFGFPVLYPDIWGTVDVFSAAGVRILVGVPLHMALITLLGVGLASLVPRPGLVLTLVLLWRFGVETFVTFVQGDVGILLQRLAPFRNAELGAGQLSTITSLFGGANGSLLYFAAICVLVFFAGVYRIVGRDVSR
SIO_010081: TPAU_RS21550
subclass of: SO_0000673
so part of: TPAU_RS21550
location: complement(68915..69733)
location: region:68915-69733:-1
so has part: feature:68915-69733:-1:exon

WP_013128856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68915-69733:-1:exon

TPAU_RS21555
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21555
old locus tag: Tpau_4316
so part of: sequence
location: complement(69730..70494)
location: region:69730-70494:-1
so has part: feature:69730-70494:-1:exon
subclass of: SO_0000010

position:69730:-1
position: 69730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70494:-1
position: 70494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69730-70494:-1:exon

TPAU_RS21555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21555
old locus tag: Tpau_4316
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007322953.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MIGVYGATKRLGDTTVVDDVDFEAPTGAITYLLGPNGTGKSTVMRMVAGLVRPDRGRILIDGAVAGRHRPGSLGVGFGPFSRHPAHTARAHLLWQARLTGLPASSADEALERVGLQSVRDRRVGGFSLGMAQRLSIASAVLGDPPTVLLDEPATGLDVDGLLWLRGLLADLSAGGTTVLVASHDLPEVEVTASRIVVLGRGRVLCDEARDDLLARATGPRPLESVYLDLTRDSVAYAQSTTTPAAAEDRTGETQ
SIO_010081: TPAU_RS21555
subclass of: SO_0000673
so part of: TPAU_RS21555
location: complement(69730..70494)
location: region:69730-70494:-1
so has part: feature:69730-70494:-1:exon

WP_013128857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69730-70494:-1:exon

TPAU_RS21560
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21560
old locus tag: Tpau_4317
so part of: sequence
location: complement(70504..70986)
location: region:70504-70986:-1
so has part: feature:70504-70986:-1:exon
subclass of: SO_0000010

position:70504:-1
position: 70504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70986:-1
position: 70986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70504-70986:-1:exon

TPAU_RS21560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21560
old locus tag: Tpau_4317
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHTSIKLAVVGVATAAAATLAVAPASADTGVRNTSAGDLYVRADKPTAAQFERQAAAFWSPNISMDAKVAVSVNGQKARPELEKVMSFNGVYDFLGASARTTGPASVNGSKASVPLSAIVVGFPATSYTYFYVREDGLWKFDWKANCAAMGCTGNPSFGY
SIO_010081: TPAU_RS21560
subclass of: SO_0000673
so part of: TPAU_RS21560
location: complement(70504..70986)
location: region:70504-70986:-1
so has part: feature:70504-70986:-1:exon

WP_013128858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70504-70986:-1:exon

TPAU_RS21565
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21565
old locus tag: Tpau_4318
so part of: sequence
location: complement(71073..71243)
location: region:71073-71243:-1
so has part: feature:71073-71243:-1:exon
subclass of: SO_0000010

position:71073:-1
position: 71073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71243:-1
position: 71243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71073-71243:-1:exon

TPAU_RS21565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21565
old locus tag: Tpau_4318
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007571611.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MbtH family protein
translation: MNPFDDTDALFSVLTNDRGEHSLWPAFAVVPDGWTLVLAPVPHREATEYVQRVWAL
SIO_010081: TPAU_RS21565
subclass of: SO_0000673
so part of: TPAU_RS21565
location: complement(71073..71243)
location: region:71073-71243:-1
so has part: feature:71073-71243:-1:exon

WP_013128859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71073-71243:-1:exon

TPAU_RS21570
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21570
old locus tag: Tpau_4319
so part of: sequence
location: complement(71248..75429)
location: region:71248-75429:-1
so has part: feature:71248-75429:-1:exon
subclass of: SO_0000010

position:71248:-1
position: 71248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75429:-1
position: 75429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71248-75429:-1:exon

TPAU_RS21570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21570
old locus tag: Tpau_4319
inference: COORDINATES: protein motif:HMM:TIGR01733.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: non-ribosomal peptide synthetase
translation: MSGSTSDAPRIEDVLALTPLQAGLHALAALTDGVDVYTMQFVIDLDGADPARLRSAAQAVLDRHPHLRASIWDRDVPRPVQVVPDRAVLPWFERRVAADELDAFLRADADAPFDLADGPLLRATHVLVDDGGARLVFTAHHILLDGWSMALFFRELLALYDGIPLPPAPLFRDYVAWLAAQSPEVGLAAWAEHLDGTSPTTLGSGPVRPGTVSGSVTCTLSAADTATVLDWGRANGLTPAAVTATAWATVLGRLTDRDDVVFGTVVAGRPEVLPGVESMVGLFINTVPQRVRIDPNAAPAAACAALQAEAARMRSVGHVPLADIARQSGGPLFDTLFVFENAPLGDATATVRTSDGAAFRPVTMRSLAHYPLSVVALIDPSDGAPRLTVVIEAVDGLDAVPRPAELGERLLQVLRALPTTGTVGALPVERPGDLVPPSASTAGVERSVAGGFTPLPRLFADLVASMPDAPALSTAETVLSYGELGGRVASAAVALSAAGIGRGDRVGLLADRDERAVIAILAALTVGAAYVPLAPDLPDDRIAAMFERAAVRAVVATTEHAQRTAGALPVVVPPETAGAGTPRPVDLGPDDDAYVIFTSGSTGEPKGVLGTHGALAAYRADHVHRMYRPAQERLGRPLRVAHGWSLSFDASWQPLLALFAGHHLRLLSDAEIRDAQAMIAVLGDEGIDMIDTSPSLFGQLAEAGLVDGDERLHVLALGGEAIPPHLWDRLAALPETDVYNCYGPTETTVEAVVGAVTPGAPRIGEPTAGTRAYVLDRRLRSVPAGAVGELYLGGPQLTRGYVGRPDLTAARFVADPFAGGGARMYRTGDLVRLDARGRIVFLGRADDQVKVRGYRIELGEVESALTSAPGVRGAGVVVMRRGGSATLVGFVAGSADAPSVRAAAARLLPGYMVPARIDVLDRLPLTRNGKVDGAALTARAEALLAAAEAGVPPSTPTEHAVAAVWEEIWPGAGTDVHADLFDLGLDSILAIAAVGRLRRAGLPVSPATLMANPTIATLAAALDAQEAPSDVDSGAVDLTPLPLVRRTLLGGGYARYAQAGLFAVPAGVALDEVGRVLDAVLAVHPALRARLSGGRLLADGPPVSAAGLLAELGTDPAAIAGTVRSLDADAGRMLAAGVLRRPDHDHDLLVVAIHHLLADGVSWQILCEDIAETALGGAPLTEVSTAAQYASRLADDGPACVDTRLSPADVAAAAQTLGFELAATASARLTGRDVEAVLADAVRRACALLPDGAPALALTRHGRDDARHGTDTSRTVGWFTTHVPAGPDEGGARWAAVNYLGRRDLAPSGPWLPVLDPGLTALIPAQPEPALPLLFPLEVLAVFRPGAGGPVLSVQVRFLPRLISPADAGAVLDALHTILSAAERAPDARKTEE
SIO_010081: TPAU_RS21570
subclass of: SO_0000673
so part of: TPAU_RS21570
location: complement(71248..75429)
location: region:71248-75429:-1
so has part: feature:71248-75429:-1:exon

WP_013128860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71248-75429:-1:exon

TPAU_RS21575
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21575
old locus tag: Tpau_4320
so part of: sequence
location: complement(75429..80390)
location: region:75429-80390:-1
so has part: feature:75429-80390:-1:exon
subclass of: SO_0000010

position:80390:-1
position: 80390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75429-80390:-1:exon

TPAU_RS21575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21575
old locus tag: Tpau_4320
inference: COORDINATES: protein motif:HMM:NF012873.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: non-ribosomal peptide synthetase
translation: MTNDLTTARRELLARRLRAAGLTTTPSSVAADPAALTAPERRMWFGQRRDPSGTELNIPFAYRLTGELDADRLLGALHAVVERHPALRTVFDEDGAGPRRTVRAAQVGWQRTDLTDLTEGERERRIRVLARRDADAPFDLSRDPLLRAHLIRTAAREHVLALVVHHIAFDDASFALLLTDLAAAYAGRSLPPAAAGRAVVAPAPADRERVAAAAERLRPLPDPVALPGDTGTDVGPASASAALPDGLDDAVAGAARALGVTPFTWLLTAHAVLVARLFDADDAAVSVPVTARPAGTEDAIGYFGTITVRRLTARPGESFRTAALRVQDDGAAALAFADVPVDAVIGALDPARAGDADGFARLAQLSFSTRAAVPGPDLEGIASAPLELATPGAQVPFEASVIRAAPGTPESRIEVRFRRGRVDPAAVEAYLTALPVLLAATVADPDADVRTLPLTTAPHADDLIAAGRGRAVDAGHPDTLTGLWEAAVDRAPEALALLTDEDAVTYAEADRRAEVLARVLDRRGVQQGDVVALDLGGGIDFPVAALAVMKLGAAYLPVDPAYPAERKRLLLGDARPRLVLDAAAVRVALDGAQGTVDTADRTRITRTRPQDPAYVIYTSGSTGRPKGVVVAHAAIAEHLAGHLTAESLDPTDRLLLTGSVSFDASVFEVFGTLTAGATLVIGRPGGAADFGYISELVARHRVSVVHMVPSTLATYLMLPDAARWRSVRWIPVGGEALPGGVADRARAVLGARISNNYGPTEAVVAATGRMVDEPRAGETVPIGGPTPGTALYVLDRALTPVPDGIAGELYLGGEQLALGYLGDPVATASKFVADPWRSGGRMYRTGDRVRRRADGDLEFLGRTDDQVKIHGFRIEPGEVAAVLSGLEGVGGAAVVAVDDPVTGPALAAYLCPAEVDVAAVAAAAERALPAHLVPSAYVVLDALPIGPNGKLARSALPAPQRAAASGGRSPATATERTVAAAVARLLDRPATEIAATDSFFVLGGHSLLVTRLVAQLRAESGIELSVRAVFDGPTVEQIAAAIDVGAGGELRLPLLARHATLPDTVPLTASQRSIWFAAALAAGVDAAPGAGVIEAAVRLDGPVDAEALAAALGDVVARHDSLRTVFSTDDGVPTARVLGSWTPELPTVRVAEDPAGARAAFLARPFPLEGAPMLRAQLLVTGTATVLQVVVHHLVTDHRSMEILVDDLFAAYRARTLGAPVAAPPAHRFADHALWQAEVFGSESGRAAVDAVAAGLRDLPGQIPALHDHPRRAELTLTRGHRAVFHVEPALRARLREVAQRHGATEFVLADAALAVVLHRVAGGRDIAIGTAASARTEPALDAMAGLIANMVVLRTTVRPESTLADVLDSARSAAALAFDRQQVPFELVVDAVAPERGPGRNPLFQTVLHVRDDAAVLAPRTVAPGLGATRLPMDFDVALVDLAVSLFGTPDGGYDGAVIAGPAVYTAATAARLADAVARVLAAFVDPATRVDAVLPELGVRTEPVAPLLDAAADCARTDFGTTGSALSAEEALSQLLDILSELLGVPGITADDNYFAVGGDSVTSLQFAARATAIGVPVTPQLVFATATLGELVAAATAAGPGPATPDGADAAAPASTTGAAPVSTTGAAAMSASGLDADQLAALTAAWKDR
SIO_010081: TPAU_RS21575
subclass of: SO_0000673
so part of: TPAU_RS21575
location: complement(75429..80390)
location: region:75429-80390:-1
so has part: feature:75429-80390:-1:exon

WP_013128861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75429-80390:-1:exon

TPAU_RS21580
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21580
old locus tag: Tpau_4321
so part of: sequence
location: complement(80430..83558)
location: region:80430-83558:-1
so has part: feature:80430-83558:-1:exon
subclass of: SO_0000010

position:80430:-1
position: 80430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83558:-1
position: 83558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80430-83558:-1:exon

TPAU_RS21580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21580
old locus tag: Tpau_4321
inference: COORDINATES: protein motif:HMM:NF012901.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MSSPTLSRSGSTPGLRPRIDGAPLLPDGLPAFVLSADGADSLAAAAAQLRRYLTEHPQVPLPAVAAALVATRDLRRHRAIVHTDDRGELVTALDALAADPVRPVGTAVPGLHTGVAAAGAPAFVFPGQGSQRRGMGALFHRESAVYRDTVEKIHAIALEVFGSSARDYLLGTGEWEQGGRPVPVEVVQPAIFMQALGLAAMWRAAGIEPRIHVGHSQGEIAAAVAAGTVGLADGLRLVTRRALAVRDNAPTGHSMAVLGTDRERCAAMLARTVGFAELSVVNSAHVLCVSGERDVVAGLVAQATERGIFAREIRVEYPAHTSLVGSMWHLREKWMGVMDHPAFLPTEHLLIGGTLGEAVPADTDFLDYWFWNLKNPVRFDLATRAALDAGADRLIELAEHPTLQLALHENIADAGARATVTGSSRRDATDLSEFSSAVADVLVTHARDLDVQRTLVAEELPPGFPAAPLSRQRLWAALPGRPATAGPVRPRTRVLDTVWTDLDAPVSAPPRPLAIIDPTGAHADLAAALLDAAARYGTPARRSDRAGDDEIAVVLVPGSAETDTTIAAVGELLADRRWWAGVQPAAGIAAVTAGAVVADPADPGPDGAAAAIAVGFRAFGADLPGVEVRHLDLDPRADAAAQAGTAIHALHVAGEPRLALRSGAVRAERWVDAEPTETGTEPPAGLLETARNVVISGGTGHLGLAFAAHAAAHGAASVTLLSRSGGGTTVRHALARIARRHPACAVTVVPCDVTDPAAVATALAGAGRAIDLVVHAAVGYRRCAATDLDASDFTAAAAAKVGGLRTLAQAVPDATLLTCSSAAAALPGAGQAWYAASNTLAEAEAAALRRAGRRAAAVRWGLWEQAGPLDEAGFAAVTAAGVIPLAAPDALAALARSTGPEPVITAVDLPRLRDVAAAFGAAALLTDLTEDTTPAVPAPSDAVPGTAPDAPATVTVTTDAAPGPAPGGGADVAAVLRHHLARALAVPADTLDPDVALVALGLDSLQALELRTAVRDELDAELPLEAILGGATLAEVSATLAG
SIO_010081: TPAU_RS21580
subclass of: SO_0000673
so part of: TPAU_RS21580
location: complement(80430..83558)
location: region:80430-83558:-1
so has part: feature:80430-83558:-1:exon

WP_013128862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80430-83558:-1:exon

TPAU_RS21585
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21585
old locus tag: Tpau_4322
so part of: sequence
location: complement(83555..84856)
location: region:83555-84856:-1
so has part: feature:83555-84856:-1:exon
subclass of: SO_0000010

position:83555:-1
position: 83555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84856:-1
position: 84856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83555-84856:-1:exon

TPAU_RS21585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21585
old locus tag: Tpau_4322
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009679322.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyketide synthase
translation: MSAPTAADRIVITGIGLEAPGGVETVEQLWDALETGEDLTGHFPRDRGWDLGEIFALHERRGYQRVPDRGGFLDAAAEFDPAFFGLSPREAIAMDPQQRVALRVAHRALAHAGIAPRSLHGTRTGCYLGASAMEYGPSPAEVNEYAGHRVAGAALGAVAGRIAHHLGTVGPAMTVDAACASSLTALHVAIAGLRSGDCELALVGGVCVMGSPAAFYEFSKNHALAPDGVLHAYGAGAAGTVWGEGAGVLVVETAAHAAAAGRPVLAEVLATRVSHNGGGGPIVVPSEAAQTALVADTLAVAGVDPDDVGMVEGHGTGTPLGDPAELAALATAYGRAGVCWLGSIKSATGHTQAAAGVLGLAKAVLCARAGVVAATLHADPPTPRHDWGAGALALPHAAQPFRPAADGRRIAAVSSFGVAGSNAHALITAGGTQ
SIO_010081: TPAU_RS21585
subclass of: SO_0000673
so part of: TPAU_RS21585
location: complement(83555..84856)
location: region:83555-84856:-1
so has part: feature:83555-84856:-1:exon

WP_013128863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83555-84856:-1:exon

TPAU_RS21590
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21590
old locus tag: Tpau_4323
so part of: sequence
location: complement(84853..85602)
location: region:84853-85602:-1
so has part: feature:84853-85602:-1:exon
subclass of: SO_0000010

position:84853:-1
position: 84853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85602:-1
position: 85602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84853-85602:-1:exon

TPAU_RS21590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21590
old locus tag: Tpau_4323
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011207294.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta fold hydrolase
translation: MSTNRGWVRQFHPAGPESARTVVLFPHAGGGASAYRLLSAALTEAGARVLIVQYPGRQDRAAEPHPGSLSGLAQGAVADLRPQLDGGPLTLFGHSMGAIVAFEAVRALEAAGITVAHLVPSAGVAPSRIAELPPHPSTDEALLARAALLDGSDPAVLAESAIARMALPAMRADFAAFDAYTCGAGVTVDAPVTALGGLDDPAVPPAHLHQWSAHTTAGAAVQLLPGGHFFVDAQIPAVVRLLAPSGVRA
SIO_010081: TPAU_RS21590
subclass of: SO_0000673
so part of: TPAU_RS21590
location: complement(84853..85602)
location: region:84853-85602:-1
so has part: feature:84853-85602:-1:exon

WP_013128864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84853-85602:-1:exon

TPAU_RS21595
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21595
old locus tag: Tpau_4324
so part of: sequence
location: 85689..86306
location: region:85689-86306:1
so has part: feature:85689-86306:1:exon
subclass of: SO_0000010

position:85689:1
position: 85689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86306:1
position: 86306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85689-86306:1:exon

TPAU_RS21595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21595
old locus tag: Tpau_4324
EC number: 2.3.1.-
inference: COORDINATES: protein motif:HMM:NF024913.2
GO function: GO:0016746 - acyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MAESDSSTRTLPRQRPDPSPAHAAVPGPVVPVLHGRFGLRVVDPEGTDPQLIARWMALPHLVATWEQPWSAAQWAEDARLRLRGDYSVPVIFTVDGADAGYVELYRVTRDEVGGTYDAHPHDMGFHIATGETGLIGRGVITAFITELADGVLTAEPQCRRMVGDPAVDNARIHRALTKAGFVHRDTVDVRPGRRISLFIRSRPDD
SIO_010081: TPAU_RS21595
subclass of: SO_0000673
so part of: TPAU_RS21595
location: 85689..86306
location: region:85689-86306:1
so has part: feature:85689-86306:1:exon

WP_013128865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85689-86306:1:exon

TPAU_RS21600
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21600
old locus tag: Tpau_4325
so part of: sequence
location: complement(86281..87624)
location: region:86281-87624:-1
so has part: feature:86281-87624:-1:exon
subclass of: SO_0000010

position:86281:-1
position: 86281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87624:-1
position: 87624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86281-87624:-1:exon

TPAU_RS21600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21600
old locus tag: Tpau_4325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013138235.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SidA/IucD/PvdA family monooxygenase
translation: MTDLLIVGAGPKAVAVAAKAAVLRANGLPAPSITVVDPLGVAGNWRAAGGWTDGAHRLGTSPLKDVGYPYRSRIAGGGGGAVDAEVDRGMLLLSWTAHLTDRGAYADWVDRGGPAPTHTEWAAYLAWVAERVGMEPVRDTVVALSPDGDGWSVGLASGERRAATRVMITGPGSSGRALLVDPAVLSVADFWAAAAARALPPGARVAVIGGGETAASALDELVRHDVFAITVVSPTPTLFTRGESYFENALYSDPSRWAMLGEQERRDVIRRTDRGVFSARVQEALLAENRVHHVPGRVVGLRRVGPDGAAGGGIELCLRATAPYTPPAYDLVVDATGGDPLWFRSLLDPAAQDLLESAVGGPVSTARVESAMGYDLAVSGVTQKLHLPTLAGFAQGPGFANLSCLGELSDRVLGTVSGASSHGAAGAGRAAGGAVPGATVSRPVATG
SIO_010081: TPAU_RS21600
subclass of: SO_0000673
so part of: TPAU_RS21600
location: complement(86281..87624)
location: region:86281-87624:-1
so has part: feature:86281-87624:-1:exon

WP_013128866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86281-87624:-1:exon

TPAU_RS21605
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21605
old locus tag: Tpau_4326
so part of: sequence
location: complement(87621..91112)
location: region:87621-91112:-1
so has part: feature:87621-91112:-1:exon
subclass of: SO_0000010

position:87621:-1
position: 87621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91112:-1
position: 91112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87621-91112:-1:exon

TPAU_RS21605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21605
old locus tag: Tpau_4326
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005142975.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: non-ribosomal peptide synthetase
translation: MSEPSSALGTDSAPAIGLDEVRATIAAALDLPVHEVTPDADLIGLGLDSLRMMALAGGWRKRGVAINFARLAAEPTAAAWASLLAAAPAVPLTPDPAPAPPAPPADPTDAFALAPMAHAYWAGRQAAELGSVAAHLSVEFDGAGVDPDRLRDAVHSVAQAHPQLRARILPDGTQRIGPDATRVSVVDLRGADAARVRAELDRLRDERTHQLLDIAAGRMWDVTLTLLPEGASRLHVDVDMIAADAVSYRILMRDLAAAYRGEAIAAPDYRYRDYLDRPPVDAAVRADDERFWRARVPELPGAPELPLSAAGRAGTALRVRRMHHRVDGAGKAAIEAAARTRGVTPAMALASVFAATVARWSAADRFLLNLPLFDREPVHPDIDGVVGDFTSSVLLDVDGTAPVTAEALQRTLHRNAAHGTVGGVEVLRMLGRAQGRQVLAPVVYTSAIGLGELFDPTVTATFGTAGHIVSQGPQVLLDAQVTEFDGGLLLNWDIRADAFEDGVADAMFEHYRASLRALADGTAAPGLPADQVRRRAEANATAHDAPPRTLHGRFFAAAAARPDAPAVLGDGAPLTYGELAAAALRVAGALRADGIGAGDAVAIHLPKGPGQVIAVLGVLAAGAHYVPVGYAQPPARRAAILAGSGARMLLDGEALAAALARDTAAPDPADTDPAEVAYVLYTSGSTGVPKGVEVSHDAATNTIDDLVERFALGPADRTLGVSALEFDLSVFDLFAPLSVGGAVVVMAEEAKADPAAWLDLTVRHAVTVVNAVPAVLDLLLARAHGSATGVPALRAVLLGGDRVCVDLIERTRAVAPAARFAGLGGATEAAIHSTVREVTGPAPAHWDCVPYGRPLRNVRCRVVDGASRDRPDHVPGELWIGGRSVALGYRGDPERTADRFVEVDGVRWYRTGDRGRYDGDGGIDFLGRADNQVKVRGHRVELGEVESALRSAPGVDGAIVRVVGEAHRAQLVAAVTGDSPAELDPAAVLAVVAAAVPGYMVPARVRVLDAFPLTGNGKTDRAAIGALLAGDAERAPARAPGSALERALLALVIEVIGADPADPPGVDDDFFALGGDSVQATALVAAIRDWLDAPAMTIAQVFAGRTVAGIATAVAEHDDPARLDAVAEVYLEVSALGADELAELIAAETAEAAASDTPEGDRA
SIO_010081: TPAU_RS21605
subclass of: SO_0000673
so part of: TPAU_RS21605
location: complement(87621..91112)
location: region:87621-91112:-1
so has part: feature:87621-91112:-1:exon

WP_013128867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87621-91112:-1:exon

TPAU_RS21610
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21610
old locus tag: Tpau_4327
so part of: sequence
location: complement(91148..91966)
location: region:91148-91966:-1
so has part: feature:91148-91966:-1:exon
subclass of: SO_0000010

position:91148:-1
position: 91148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91966:-1
position: 91966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91148-91966:-1:exon

TPAU_RS21610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21610
old locus tag: Tpau_4327
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018180270.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MSTRSGTTSGTVTVDRRAVPLAPATLVVAGALLRAWSRSPVVLVQAIAFPAFLLAMFQLVLGKTVTAMGAGTSIYANAGLIALVSALYGSLATGLSFITERESGVLSRHATMPVPRAALLAGRLVAEAGRTAVSTALLLAMAVVLGLRFTQGPLAAAAAYLVPIAFGTAFALVVLALAAVTAGTQMVQLFGGVFLLLMFFGTGFVPADQYPVWLQPIVRWQPLSPATDLMRGLTEGGPVAVPLLATALWIAGILAFAFPVALRGFAGAAVRR
SIO_010081: TPAU_RS21610
subclass of: SO_0000673
so part of: TPAU_RS21610
location: complement(91148..91966)
location: region:91148-91966:-1
so has part: feature:91148-91966:-1:exon

WP_013128868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91148-91966:-1:exon

TPAU_RS21615
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21615
old locus tag: Tpau_4328
so part of: sequence
location: complement(91963..92742)
location: region:91963-92742:-1
so has part: feature:91963-92742:-1:exon
subclass of: SO_0000010

position:91963:-1
position: 91963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92742:-1
position: 92742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91963-92742:-1:exon

TPAU_RS21615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21615
old locus tag: Tpau_4328
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018180271.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MSIVEHPRTSVPLLRATRVLAARGVRGGVREGDLVFAIAAPVLFFLCFYTPLHRSFEAAGGDYAQYLAPVITLQAGLFTAIVAGQRAGQDRATAATERLATLPVPRVAPTLARLLAIGARAAITIATATAIAAVFGFRLHGLVPAVGYFALVLVVTLALSALADALGSVTAAPERIGELLMLPQVVLVMASTGLVPAAAFPEWIQPVVRNQPVSVFADALRGLADGDSGDPTAALIWAAALVVVGALACVLVARKDARR
SIO_010081: TPAU_RS21615
subclass of: SO_0000673
so part of: TPAU_RS21615
location: complement(91963..92742)
location: region:91963-92742:-1
so has part: feature:91963-92742:-1:exon

WP_013128869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91963-92742:-1:exon

TPAU_RS21620
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21620
old locus tag: Tpau_4329
so part of: sequence
location: complement(92739..93680)
location: region:92739-93680:-1
so has part: feature:92739-93680:-1:exon
subclass of: SO_0000010

position:92739:-1
position: 92739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93680:-1
position: 93680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92739-93680:-1:exon

TPAU_RS21620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21620
old locus tag: Tpau_4329
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007316953.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: daunorubicin/doxorubicin resistance ABC transporter ATP-binding protein DrrA
translation: MNEMIRIEGLRRTFGAVTALDSISFSVPEGSVLGLLGPNGSGKTTTVSILSTLLTPDSGRAEVAGFDVVRDAARARESISLTGQFAALDQALTVRENIALFGRLTGLRRGDLAGRTSALAQTYGLGEFLDRRVGALSGGMRRRVDIACALVTRPRVLFLDEPTTGLDPQSRAAVWDAVRALRADGITVLMTTQYLAEADELADDVVVLGAGRVLAQGSPAELKHRAGASRCEIVLVEPGRVDGVVARLSARGHDAHRAADGVVVVAAPDGQATLLAVLGLLTDVPLVSAGLRPPSLDEVFLQLIDDDPEQVTA
SIO_010081: TPAU_RS21620
subclass of: SO_0000673
so part of: TPAU_RS21620
location: complement(92739..93680)
location: region:92739-93680:-1
so has part: feature:92739-93680:-1:exon

WP_013128870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92739-93680:-1:exon

TPAU_RS21625
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21625
old locus tag: Tpau_4330
so part of: sequence
location: complement(93677..95011)
location: region:93677-95011:-1
so has part: feature:93677-95011:-1:exon
subclass of: SO_0000010

position:93677:-1
position: 93677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95011:-1
position: 95011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93677-95011:-1:exon

TPAU_RS21625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21625
old locus tag: Tpau_4330
EC number: 4.2.99.21
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006332946.1
GO function: GO:0043904 - isochorismate pyruvate lyase activity [Evidence IEA]; GO:0008909 - isochorismate synthase activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: salicylate synthase
translation: MSVAIDGPLADPFPSVTELGRGTGHRLCATWAAAGLADEYVVYEAPAGLVFAGGVRARIRLTATDVTVSVEGDADTRTYRGAPAAALAAALARLPFHRWRVYGWTAFEFTSHLSAGLRSGVLAELVVPEFEIHVAADGTVDRTGVPAGVLERLAAIAPIAPIDTVSCPVDVRRSGDDGYRARVAAAIAEIRAGAYEKVILSRRLPVPFPVDVPASYALGRDSNTPARSFLLRLSGLEAAGFSPEIVGAVHADGTVETQPLAGTRALHMDGTDPQALRAELLSDAKEIVEHALSVQLSCAEVDAIAVPSTRMVSEFMTVRERGSVQHLASTVIGKLATGVSAWEALDVLFPAVTASGIPKAPAVDAIARLEPHPRGPYAGAVVTASSNGELDAALVLRSLFSTEDGAWLQAGAGVIAQSDPQREFEETCEKLASVAPYLVRRAAR
SIO_010081: TPAU_RS21625
subclass of: SO_0000673
so part of: TPAU_RS21625
location: complement(93677..95011)
location: region:93677-95011:-1
so has part: feature:93677-95011:-1:exon

WP_013128871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93677-95011:-1:exon

TPAU_RS21630
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS21630
old locus tag: Tpau_4331
so part of: sequence
location: 95094..96701
location: region:95094-96701:1
so has part: feature:95094-96701:1:exon
subclass of: SO_0000010

position:95094:1
position: 95094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96701:1
position: 96701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95094-96701:1:exon

TPAU_RS21630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS21630
old locus tag: Tpau_4331
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006435013.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AMP-binding protein
translation: MTFVSPSAADFVNLPPQQRRRYVEARLYEGLPLWSAILGTGRTDPSLPAVLDEERSLTRAELDSASAARAAGFAGEFAPGDVVVLHLPNTVEFVVTLLGLLRAGVLPVMALPAHRIAEIEHLAATSGAVGYICADDRTGYDYRDLGTELRGRVPAVRSVLVDGAPGPHRALVDGAPSDSPDVRPDPTTPALFLISGGTTGAPKLIPRTHEDYLYNARTAAAVCGLGPDDVYLVALPAAHNFPLACPGLIGALLTGGRVVLTRDPSPDSALELIEQHRVTVTALVPALAQLWTAARAWESADVTSLRLLQVGGAKLAEPDARAAQEAFPGTLQQVFGMAEGLINLTRIGADPDVVATTQGIPMSPFDELRVVDEDGEDVPEGTVGELLTRGPYTIRGYYRAGAANRRAFTSDGFYRSGDQVRIRPDGSIEYVSRIKETIVRGGENIFPDDIEEALLAHPAVREAGVIGLPDPVLGERTCAVLVTDGRLLTLAEVRDHLTGRGLAAFKLPDRVRVIDDLPLTAVGKVDKKALRGLLR
SIO_010081: TPAU_RS21630
subclass of: SO_0000673
so part of: TPAU_RS21630
location: 95094..96701
location: region:95094-96701:1
so has part: feature:95094-96701:1:exon

WP_115330047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95094-96701:1:exon

TPAU_RS23285
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS23285
old locus tag: Tpau_4332
so part of: sequence
location: 96949..97092
location: region:96949-97092:1
so has part: feature:96949-97092:1:exon
subclass of: SO_0000010

position:96949:1
position: 96949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97092:1
position: 97092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96949-97092:1:exon

TPAU_RS23285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS23285
old locus tag: Tpau_4332
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLGVYAVLDAVDDAYPGLLDYYATIRSEGVPGDRSSTLASRSVVWTR
SIO_010081: TPAU_RS23285
subclass of: SO_0000673
so part of: TPAU_RS23285
location: 96949..97092
location: region:96949-97092:1
so has part: feature:96949-97092:1:exon

WP_013128873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96949-97092:1:exon

TPAU_RS22655
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS22655
old locus tag: Tpau_4334
so part of: sequence
location: complement(97524..98861)
location: region:97524-98861:-1
so has part: feature:97524-98861:-1:exon
subclass of: SO_0000010

position:97524:-1
position: 97524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98861:-1
position: 98861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97524-98861:-1:exon

TPAU_RS22655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS22655
old locus tag: Tpau_4334
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSKNLGPAEHASSDPETLVLTPQWSAAQKICFRLLFTLGSGLLILVIYSNAGLAPILRITGVQWVVSQIGSYVSRGDSVAIGTGSDQAWQWYMLLGWAILAVIITAAWTALDRSHQNYRGLAGLLHVFTRVGLALSLIIYGLAKVLPTQMGYMALPAYQLQLVGDTSLFHTLWGFMGASTPYSVAVGLVELVSGILLLCRRTWLFGATLAIIATVQVLLLNLFYDVPVKIVASALTIAAFVVLAPGWRNLWYALTNQPGVPPLTLWPASGSGRAGISVVGTIVKWLAASLIIINHGTAGAIGLYILHTPRSDLDGVWSANEFTINGSPARVEDRPWTNMSITLRGSDTNPALAPASKRYDTLVSQDSTGHTVAWRLEQTGVELNLRAGGNGPRVKITTNQVSHDLLYISGTIGGNKIEGKYVRRAMQRENSIRLVQPDAQNSSR
SIO_010081: TPAU_RS22655
subclass of: SO_0000673
so part of: TPAU_RS22655
location: complement(97524..98861)
location: region:97524-98861:-1
so has part: feature:97524-98861:-1:exon

WP_013128875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97524-98861:-1:exon

TPAU_RS22660
type: Gene
subclass of: SO_0000704
RO_0002162: 521096
locus tag: TPAU_RS22660
old locus tag: Tpau_4335
so part of: sequence
location: complement(98872..99795)
location: region:98872-99795:-1
so has part: feature:98872-99795:-1:exon
subclass of: SO_0000010

position:98872:-1
position: 98872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99795:-1
position: 99795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98872-99795:-1:exon

TPAU_RS22660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 521096
locus tag: TPAU_RS22660
old locus tag: Tpau_4335
EC number: 3.4.21.-
inference: COORDINATES: protein motif:HMM:NF012318.2
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trypsin-like serine protease
translation: MRIFSDRLKQEFYMRKIVIGAATLALLCLSFLSYTAASPALAAPVENDMVAPIGWKVASGAADVDHPLDSSGLVNPSGLSETSPSPGSQFDARTIIGPDDRGQIQNTRAFPYRAIGQATYDSGVLIGYVCSAWLASADTLVTAGHCVHNLFDDGIVRNFAFSPARNGSLNPWGTVQAREIWTDKYYNIKSGRDWAVIKLAEPIGSTVGWLGMTKSTSISSSLGQQATITGYPADKPYGTQWSASGMIDNETPQYLQYTIDTFGGQSGSPLYRSARALGIHVSGTASHNSATKLSEPLFDVIVNLSRR
SIO_010081: TPAU_RS22660
subclass of: SO_0000673
so part of: TPAU_RS22660
location: complement(98872..99795)
location: region:98872-99795:-1
so has part: feature:98872-99795:-1:exon

WP_160160302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98872-99795:-1:exon