Borreliella bissettiae DN127 plasmid lp54, complete sequence.
Bacteria; Spirochaetes; Spirochaetales; Borreliaceae; Borreliella.
Whole-genome sequences of Borrelia bissettii, Borrelia valaisiana, and Borrelia spielmanii
Submitted (27-JUN-2011) Institute for Genome Sciences, University of Maryland School of Medicine, 801 W. Baltimore Street, Baltimore, MD 21201, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP002761.1.\nThe DNA or cells for this strains can be obtained from Sherwood\nCasjens (Univ. of Utah, sherwood.casjens@path.utah.edu).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/07/2022 16:43:11\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,449\nCDSs (total) :: 1,409\nGenes (coding) :: 1,335\nCDSs (with protein) :: 1,335\nGenes (RNA) :: 40\nrRNAs :: 2, 1, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 1, 2 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 3\nPseudo Genes (total) :: 74\nCDSs (without protein) :: 74\nPseudo Genes (ambiguous residues) :: 0 of 74\nPseudo Genes (frameshifted) :: 44 of 74\nPseudo Genes (incomplete) :: 27 of 74\nPseudo Genes (internal stop) :: 30 of 74\nPseudo Genes (multiple problems) :: 23 of 74\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
Ixodes pacificus (western blackleg tick)
COORDINATES: similar to AA sequence:RefSeq:WP_011187144.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010258570.1
COORDINATES: similar to AA sequence:RefSeq:WP_012615015.1
COORDINATES: similar to AA sequence:RefSeq:WP_012665592.1
COORDINATES: similar to AA sequence:RefSeq:WP_010258556.1
COORDINATES: similar to AA sequence:RefSeq:WP_010258106.1
COORDINATES: similar to AA sequence:RefSeq:WP_014023193.1
DUF276 is restricted to Borreliella and related spirochetes; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014023194.1
COORDINATES: similar to AA sequence:RefSeq:WP_014023195.1
COORDINATES: similar to AA sequence:RefSeq:WP_010258115.1
GO:0140911 - pore-forming activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012784223.1
BlyB family putative holin accessory protein
COORDINATES: similar to AA sequence:RefSeq:WP_014023198.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890378.1
COORDINATES: similar to AA sequence:RefSeq:WP_014023200.1
COORDINATES: similar to AA sequence:RefSeq:WP_010258125.1
COORDINATES: similar to AA sequence:RefSeq:WP_010258127.1
COORDINATES: similar to AA sequence:RefSeq:WP_014695375.1
COORDINATES: similar to AA sequence:RefSeq:WP_010258133.1
chromosome replication/partitioning protein
COORDINATES: similar to AA sequence:RefSeq:WP_010258341.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259083.1
COORDINATES: similar to AA sequence:RefSeq:WP_014695369.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_010258362.1
COORDINATES: similar to AA sequence:RefSeq:WP_010258365.1
PBSX family phage terminase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012784243.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890384.1
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011703795.1
COORDINATES: similar to AA sequence:RefSeq:WP_011703796.1
COORDINATES: similar to AA sequence:RefSeq:WP_014695358.1
COORDINATES: similar to AA sequence:RefSeq:WP_011703798.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257711.1
COORDINATES: similar to AA sequence:RefSeq:WP_011187180.1
COORDINATES: similar to AA sequence:RefSeq:WP_014023224.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257720.1
COORDINATES: similar to AA sequence:RefSeq:WP_014695351.1
COORDINATES: similar to AA sequence:RefSeq:WP_012784232.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890388.1
COORDINATES: similar to AA sequence:RefSeq:WP_012784233.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257732.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257105.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257736.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257109.1
COORDINATES: similar to AA sequence:RefSeq:WP_011703811.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257126.1
COORDINATES: similar to AA sequence:RefSeq:WP_012666049.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890392.1
COORDINATES: similar to AA sequence:RefSeq:WP_012615000.1
COORDINATES: similar to AA sequence:RefSeq:WP_012784236.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257147.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257151.1
COORDINATES: similar to AA sequence:RefSeq:WP_012614997.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257157.1
COORDINATES: similar to AA sequence:RefSeq:WP_014695325.1
COORDINATES: similar to AA sequence:RefSeq:WP_014023247.1
COORDINATES: similar to AA sequence:RefSeq:WP_011703827.1
COORDINATES: similar to AA sequence:RefSeq:WP_012672483.1
COORDINATES: protein motif:HMM:NF033729.0
COORDINATES: similar to AA sequence:RefSeq:WP_012614999.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257191.1
COORDINATES: similar to AA sequence:RefSeq:WP_012784240.1
GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]