Borreliella bissettiae DN127 plasmid cp32-5, complete sequence.
Bacteria; Spirochaetes; Spirochaetales; Borreliaceae; Borreliella.
Whole-genome sequences of Borrelia bissettii, Borrelia valaisiana, and Borrelia spielmanii
Submitted (27-JUN-2011) Institute for Genome Sciences, University of Maryland School of Medicine, 801 W. Baltimore Street, Baltimore, MD 21201, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP002751.1.\nThe DNA or cells for this strains can be obtained from Sherwood\nCasjens (Univ. of Utah, sherwood.casjens@path.utah.edu).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/07/2022 16:43:11\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,449\nCDSs (total) :: 1,409\nGenes (coding) :: 1,335\nCDSs (with protein) :: 1,335\nGenes (RNA) :: 40\nrRNAs :: 2, 1, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 1, 2 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 3\nPseudo Genes (total) :: 74\nCDSs (without protein) :: 74\nPseudo Genes (ambiguous residues) :: 0 of 74\nPseudo Genes (frameshifted) :: 44 of 74\nPseudo Genes (incomplete) :: 27 of 74\nPseudo Genes (internal stop) :: 30 of 74\nPseudo Genes (multiple problems) :: 23 of 74\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
Ixodes pacificus (western blackleg tick)
COORDINATES: similar to AA sequence:RefSeq:WP_012621337.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014540092.1
COORDINATES: similar to AA sequence:RefSeq:WP_014540879.1
COORDINATES: similar to AA sequence:RefSeq:WP_002658639.1
COORDINATES: similar to AA sequence:RefSeq:WP_012593056.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010883814.1
COORDINATES: similar to AA sequence:RefSeq:WP_014540034.1
COORDINATES: similar to AA sequence:RefSeq:WP_002658726.1
COORDINATES: similar to AA sequence:RefSeq:WP_014017447.1
COORDINATES: similar to AA sequence:RefSeq:WP_002658435.1
COORDINATES: similar to AA sequence:RefSeq:WP_014017491.1
COORDINATES: similar to AA sequence:RefSeq:WP_012665023.1
COORDINATES: similar to AA sequence:RefSeq:WP_014540912.1
COORDINATES: similar to AA sequence:RefSeq:WP_014017452.1
COORDINATES: similar to AA sequence:RefSeq:WP_014017708.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257818.1
COORDINATES: similar to AA sequence:RefSeq:WP_014017455.1
COORDINATES: similar to AA sequence:RefSeq:WP_010256325.1
COORDINATES: similar to AA sequence:RefSeq:WP_014540064.1
COORDINATES: similar to AA sequence:RefSeq:WP_010883841.1
DUF276 is restricted to Borreliella and related spirochetes; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014486178.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259417.1
COORDINATES: similar to AA sequence:RefSeq:WP_002658481.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257832.1
BlyB family putative holin accessory protein
COORDINATES: similar to AA sequence:RefSeq:WP_014486154.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259076.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259736.1
COORDINATES: similar to AA sequence:RefSeq:WP_015056670.1
COORDINATES: similar to AA sequence:RefSeq:WP_014017715.1
COORDINATES: similar to AA sequence:RefSeq:WP_010258844.1
COORDINATES: similar to AA sequence:RefSeq:WP_014017692.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257942.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257945.1
chromosome replication/partitioning protein
COORDINATES: similar to AA sequence:RefSeq:WP_010258486.1
COORDINATES: similar to AA sequence:RefSeq:WP_012621480.1
COORDINATES: similar to AA sequence:RefSeq:WP_010883923.1
COORDINATES: similar to AA sequence:RefSeq:WP_014017723.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012664924.1
COORDINATES: similar to AA sequence:RefSeq:WP_010258949.1
COORDINATES: similar to AA sequence:RefSeq:WP_012599357.1
COORDINATES: similar to AA sequence:RefSeq:WP_014017644.1
PBSX family phage terminase large subunit