Elaeis guineensis chromosome 15, EG5, whole genome shotgun sequence.
type: Entry
definition: Elaeis guineensis chromosome 15, EG5, whole genome shotgun sequence.
sequence version: NC_026007.1
sequence date: 2019-05-22
sequence: sequence
division: CON
label: NC_026007.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA268357
dblink: SAMN02981535
keyword: WGS
keyword: RefSeq
source: Elaeis guineensis (African oil palm)
organism: Elaeis guineensis
taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis.
reference: 1
references: 23883927
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM002095.1.\nAssembly name: EG5\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by Orion Genomics on 2013/08/13\n(http://www.ncbi.nlm.nih.gov/assembly/GCA_000442705). The original\nwhole-genome shotgun project has the accession ASJS00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Orion Genomics\nAssembly Method :: Newbler v. 2.6\nAssembly Name :: EG5\nLong Assembly Name :: MPOB_ElaeisGuineensis5\nGenome Coverage :: 16.0x\nSequencing Technology :: 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Elaeis guineensis Annotation Release\n 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 24314465
topology: linear
so has quality: SO_0000987
location: 1..24314465
location: region:1-24314465:1
RO_0002162: 51953

NC_026007
type: RefSeq
SIO_000068: refseq

PRJNA268357
type: BioProject
SIO_000068: bioproject

SAMN02981535
type: BioSample
SIO_000068: biosample

1
title: Oil palm genome sequence reveals divergence of interfertile species in Old and New worlds
author: Singh, R.
author: Ong-Abdullah, M.
author: Low, E.T.
author: Manaf, M.A.
author: Rosli, R.
author: Nookiah, R.
author: Ooi, L.C.
author: Ooi, S.E.
author: Chan, K.L.
author: Halim, M.A.
author: Azizi, N.
author: Nagappan, J.
author: Bacher, B.
author: Lakey, N.
author: Smith, S.W.
author: He, D.
author: Hogan, M.
author: Budiman, M.A.
author: Lee, E.K.
author: Desalle, R.
author: Kudrna, D.
author: Goicoechea, J.L.
author: Wing, R.A.
author: Wilson, R.K.
author: Fulton, R.S.
author: Ordway, J.M.
author: Martienssen, R.A.
author: Sambanthamurthi, R.
journal: Nature (2013) In press
pubmed: 23883927
comments: Publication Status: Available-Online prior to print

23883927
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24314465:1
position: 24314465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-24314465:1:source
so part of: sequence
organism: Elaeis guineensis
mol type: genomic DNA
chromosome: 15
authority: Elaeis guineensis Jacq.

51953
type: Taxonomy
SIO_000068: taxonomy

LOC105057907
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 108130..198305
location: region:108130-198305:1
so has part: feature:108130-198305:1:exon
subclass of: SO_0000010

105057907
type: Gene
SIO_000068: ncbigene

position:108130:1
position: 108130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198305:1
position: 198305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108130-198305:1:exon

LOC105057907
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057907
product: uncharacterized LOC105057907, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_019855200.2
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(108130..108513,158004..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..198305)
location: region:108130-198305:1
so has part: feature:108130-108513:1:exon
so has part: feature:158004-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-198305:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108130-108513:1:exon

position:108513:1
position: 108513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158004-158438:1:exon

position:158004:1
position: 158004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158438:1
position: 158438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:158536-158588:1:exon

position:158536:1
position: 158536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158588:1
position: 158588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:159652-159689:1:exon

position:159652:1
position: 159652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159689:1
position: 159689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:196018-196336:1:exon

position:196018:1
position: 196018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196336:1
position: 196336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:196583-196893:1:exon

position:196583:1
position: 196583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196893:1
position: 196893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:197234-198305:1:exon

position:197234:1
position: 197234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057907
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057907
product: uncharacterized LOC105057907, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_019855203.2
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(108130..108513,143932..144025,152825..153002,158004..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:108130-197864:1
so has part: feature:108130-108513:1:exon
so has part: feature:143932-144025:1:exon
so has part: feature:152825-153002:1:exon
so has part: feature:158004-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

position:197864:1
position: 197864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108130-108513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143932-144025:1:exon

position:143932:1
position: 143932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144025:1
position: 144025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:152825-153002:1:exon

position:152825:1
position: 152825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153002:1
position: 153002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:158004-158438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:197234-197864:1:exon

LOC105057907
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057907
product: uncharacterized LOC105057907, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029268341.1
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(108130..108513,143932..144025,158004..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:108130-197864:1
so has part: feature:108130-108513:1:exon
so has part: feature:143932-144025:1:exon
so has part: feature:158004-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108130-108513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143932-144025:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158004-158438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197234-197864:1:exon

LOC105057907
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057907
product: uncharacterized LOC105057907, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_019855202.2
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(108130..108513,152825..153002,158004..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:108130-197864:1
so has part: feature:108130-108513:1:exon
so has part: feature:152825-153002:1:exon
so has part: feature:158004-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108130-108513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152825-153002:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158004-158438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197234-197864:1:exon

LOC105057907
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057907
product: uncharacterized LOC105057907, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_019855204.2
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(108130..108513,152825..153002,158016..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:108130-197864:1
so has part: feature:108130-108513:1:exon
so has part: feature:152825-153002:1:exon
so has part: feature:158016-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108130-108513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152825-153002:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158016-158438:1:exon

position:158016:1
position: 158016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197234-197864:1:exon

LOC105057907
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057907
product: uncharacterized LOC105057907, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019855207.2
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(108130..108513,152825..153002,158307..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:108130-197864:1
so has part: feature:108130-108513:1:exon
so has part: feature:152825-153002:1:exon
so has part: feature:158307-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108130-108513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152825-153002:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158307-158438:1:exon

position:158307:1
position: 158307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197234-197864:1:exon

LOC105057907
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057907
product: uncharacterized LOC105057907, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_019855201.2
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(108130..108513,158016..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:108130-197864:1
so has part: feature:108130-108513:1:exon
so has part: feature:158016-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108130-108513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158016-158438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197234-197864:1:exon

LOC105057907
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057907
product: uncharacterized LOC105057907, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_019855206.2
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(108130..108513,158307..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:108130-197864:1
so has part: feature:108130-108513:1:exon
so has part: feature:158307-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108130-108513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158307-158438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197234-197864:1:exon

LOC105057907
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057907
product: uncharacterized LOC105057907, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029268340.1
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(108343..108513,147892..147947,152825..153002,158004..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:108343-197864:1
so has part: feature:108343-108513:1:exon
so has part: feature:147892-147947:1:exon
so has part: feature:152825-153002:1:exon
so has part: feature:158004-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

position:108343:1
position: 108343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108343-108513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147892-147947:1:exon

position:147892:1
position: 147892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147947:1
position: 147947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:152825-153002:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158004-158438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:197234-197864:1:exon

LOC105057907
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057907 isoform X1
translation: MFCVSWSSTCLPRRQVFGCSPVLQKEKPQLKLSEGCNAFSDMSAAVFFADIFTSQSAFRKHLGALKTQPQCHGKIVDRLSLVKEERVGSLWKYPIQIARKTNFKGWSLDKQQTPLIKVDATVEPKYLVPTENDNRNDFMLKFCSNSDSQLFQISNDESSEIDDKERLRRMKISKANKGNVPWNKGRKHSAETLQRIRERTRIAMQDPKVKLKLVNLGHSQSEETRIKIGAGVRQGWRRRRKKLILQESCFVEWRNMIAEAARKGYAGEDELQWDSYKILDEQLKQEWLESVEKRKMMPRPKGSKRAPKSPEQRRKISDAISAKWADPEYRDRVCTALAKYHATAMGAERKRRRRPTGKTPLKMDSVEKKLTEAKSIKSELKSIQKTISKRKRTSIPYKDPMARSKLEMIKRIRAQRVAIEAKKRKAVNRAKLLIAEAEKAAKALELAALKSPLAQASLLETRKLIAEATRSMEKIENGQLTSQDVGDDASFSSGGPTENLHINQRTQSHDEFLDERLVNGMHLLTSGDSNHRDFDFKKFTLQNALNGREPLTAEKCTENSSDVICGDLSSQSRYVRNELEVNNLQVDQLTVNGSVSYDKFTASREELRTSELNECEGSTTFVTKSKRKWVYGRLIEVEED
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(108378..108513,158004..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:108378-197864:1
so has part: feature:108378-108513:1:exon
so has part: feature:158004-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

XP_019710759.1
type: Protein
SIO_000068: ncbiprotein

position:108378:1
position: 108378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108378-108513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158004-158438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197234-197864:1:exon

LOC105057907
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057907 isoform X2
translation: MFCVSWSSTCLPRRQVFGCSPVLQKEKPQLKLSEGCNAFSDMSAADIFTSQSAFRKHLGALKTQPQCHGKIVDRLSLVKEERVGSLWKYPIQIARKTNFKGWSLDKQQTPLIKVDATVEPKYLVPTENDNRNDFMLKFCSNSDSQLFQISNDESSEIDDKERLRRMKISKANKGNVPWNKGRKHSAETLQRIRERTRIAMQDPKVKLKLVNLGHSQSEETRIKIGAGVRQGWRRRRKKLILQESCFVEWRNMIAEAARKGYAGEDELQWDSYKILDEQLKQEWLESVEKRKMMPRPKGSKRAPKSPEQRRKISDAISAKWADPEYRDRVCTALAKYHATAMGAERKRRRRPTGKTPLKMDSVEKKLTEAKSIKSELKSIQKTISKRKRTSIPYKDPMARSKLEMIKRIRAQRVAIEAKKRKAVNRAKLLIAEAEKAAKALELAALKSPLAQASLLETRKLIAEATRSMEKIENGQLTSQDVGDDASFSSGGPTENLHINQRTQSHDEFLDERLVNGMHLLTSGDSNHRDFDFKKFTLQNALNGREPLTAEKCTENSSDVICGDLSSQSRYVRNELEVNNLQVDQLTVNGSVSYDKFTASREELRTSELNECEGSTTFVTKSKRKWVYGRLIEVEED
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(108378..108513,158016..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:108378-197864:1
so has part: feature:108378-108513:1:exon
so has part: feature:158016-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

XP_019710760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108378-108513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158016-158438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197234-197864:1:exon

LOC105057907
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057907 isoform X5
translation: MFCVSWSSTCLPRRQVFGCSPVLQKEKPQLKLSEGCNAFSDMSAADSQLFQISNDESSEIDDKERLRRMKISKANKGNVPWNKGRKHSAETLQRIRERTRIAMQDPKVKLKLVNLGHSQSEETRIKIGAGVRQGWRRRRKKLILQESCFVEWRNMIAEAARKGYAGEDELQWDSYKILDEQLKQEWLESVEKRKMMPRPKGSKRAPKSPEQRRKISDAISAKWADPEYRDRVCTALAKYHATAMGAERKRRRRPTGKTPLKMDSVEKKLTEAKSIKSELKSIQKTISKRKRTSIPYKDPMARSKLEMIKRIRAQRVAIEAKKRKAVNRAKLLIAEAEKAAKALELAALKSPLAQASLLETRKLIAEATRSMEKIENGQLTSQDVGDDASFSSGGPTENLHINQRTQSHDEFLDERLVNGMHLLTSGDSNHRDFDFKKFTLQNALNGREPLTAEKCTENSSDVICGDLSSQSRYVRNELEVNNLQVDQLTVNGSVSYDKFTASREELRTSELNECEGSTTFVTKSKRKWVYGRLIEVEED
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(108378..108513,158307..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:108378-197864:1
so has part: feature:108378-108513:1:exon
so has part: feature:158307-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

XP_019710765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108378-108513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158307-158438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197234-197864:1:exon

LOC105057907
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057907 isoform X3
translation: MMAYLDVIAPSHLCEGGTSRNHCPSQQPFFFADIFTSQSAFRKHLGALKTQPQCHGKIVDRLSLVKEERVGSLWKYPIQIARKTNFKGWSLDKQQTPLIKVDATVEPKYLVPTENDNRNDFMLKFCSNSDSQLFQISNDESSEIDDKERLRRMKISKANKGNVPWNKGRKHSAETLQRIRERTRIAMQDPKVKLKLVNLGHSQSEETRIKIGAGVRQGWRRRRKKLILQESCFVEWRNMIAEAARKGYAGEDELQWDSYKILDEQLKQEWLESVEKRKMMPRPKGSKRAPKSPEQRRKISDAISAKWADPEYRDRVCTALAKYHATAMGAERKRRRRPTGKTPLKMDSVEKKLTEAKSIKSELKSIQKTISKRKRTSIPYKDPMARSKLEMIKRIRAQRVAIEAKKRKAVNRAKLLIAEAEKAAKALELAALKSPLAQASLLETRKLIAEATRSMEKIENGQLTSQDVGDDASFSSGGPTENLHINQRTQSHDEFLDERLVNGMHLLTSGDSNHRDFDFKKFTLQNALNGREPLTAEKCTENSSDVICGDLSSQSRYVRNELEVNNLQVDQLTVNGSVSYDKFTASREELRTSELNECEGSTTFVTKSKRKWVYGRLIEVEED
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(152918..153002,158004..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:152918-197864:1
so has part: feature:152918-153002:1:exon
so has part: feature:158004-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

XP_019710761.1
type: Protein
SIO_000068: ncbiprotein

position:152918:1
position: 152918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152918-153002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158004-158438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197234-197864:1:exon

LOC105057907
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057907 isoform X3
translation: MMAYLDVIAPSHLCEGGTSRNHCPSQQPFFFADIFTSQSAFRKHLGALKTQPQCHGKIVDRLSLVKEERVGSLWKYPIQIARKTNFKGWSLDKQQTPLIKVDATVEPKYLVPTENDNRNDFMLKFCSNSDSQLFQISNDESSEIDDKERLRRMKISKANKGNVPWNKGRKHSAETLQRIRERTRIAMQDPKVKLKLVNLGHSQSEETRIKIGAGVRQGWRRRRKKLILQESCFVEWRNMIAEAARKGYAGEDELQWDSYKILDEQLKQEWLESVEKRKMMPRPKGSKRAPKSPEQRRKISDAISAKWADPEYRDRVCTALAKYHATAMGAERKRRRRPTGKTPLKMDSVEKKLTEAKSIKSELKSIQKTISKRKRTSIPYKDPMARSKLEMIKRIRAQRVAIEAKKRKAVNRAKLLIAEAEKAAKALELAALKSPLAQASLLETRKLIAEATRSMEKIENGQLTSQDVGDDASFSSGGPTENLHINQRTQSHDEFLDERLVNGMHLLTSGDSNHRDFDFKKFTLQNALNGREPLTAEKCTENSSDVICGDLSSQSRYVRNELEVNNLQVDQLTVNGSVSYDKFTASREELRTSELNECEGSTTFVTKSKRKWVYGRLIEVEED
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(152918..153002,158004..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:152918-197864:1
so has part: feature:152918-153002:1:exon
so has part: feature:158004-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

XP_019710762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152918-153002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158004-158438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197234-197864:1:exon

LOC105057907
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057907 isoform X3
translation: MMAYLDVIAPSHLCEGGTSRNHCPSQQPFFFADIFTSQSAFRKHLGALKTQPQCHGKIVDRLSLVKEERVGSLWKYPIQIARKTNFKGWSLDKQQTPLIKVDATVEPKYLVPTENDNRNDFMLKFCSNSDSQLFQISNDESSEIDDKERLRRMKISKANKGNVPWNKGRKHSAETLQRIRERTRIAMQDPKVKLKLVNLGHSQSEETRIKIGAGVRQGWRRRRKKLILQESCFVEWRNMIAEAARKGYAGEDELQWDSYKILDEQLKQEWLESVEKRKMMPRPKGSKRAPKSPEQRRKISDAISAKWADPEYRDRVCTALAKYHATAMGAERKRRRRPTGKTPLKMDSVEKKLTEAKSIKSELKSIQKTISKRKRTSIPYKDPMARSKLEMIKRIRAQRVAIEAKKRKAVNRAKLLIAEAEKAAKALELAALKSPLAQASLLETRKLIAEATRSMEKIENGQLTSQDVGDDASFSSGGPTENLHINQRTQSHDEFLDERLVNGMHLLTSGDSNHRDFDFKKFTLQNALNGREPLTAEKCTENSSDVICGDLSSQSRYVRNELEVNNLQVDQLTVNGSVSYDKFTASREELRTSELNECEGSTTFVTKSKRKWVYGRLIEVEED
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(152918..153002,158004..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:152918-197864:1
so has part: feature:152918-153002:1:exon
so has part: feature:158004-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

XP_029124173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152918-153002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158004-158438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197234-197864:1:exon

LOC105057907
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057907 isoform X4
translation: MMAYLDVIAPSHLCEGGTSRNHCPSQQPYIFTSQSAFRKHLGALKTQPQCHGKIVDRLSLVKEERVGSLWKYPIQIARKTNFKGWSLDKQQTPLIKVDATVEPKYLVPTENDNRNDFMLKFCSNSDSQLFQISNDESSEIDDKERLRRMKISKANKGNVPWNKGRKHSAETLQRIRERTRIAMQDPKVKLKLVNLGHSQSEETRIKIGAGVRQGWRRRRKKLILQESCFVEWRNMIAEAARKGYAGEDELQWDSYKILDEQLKQEWLESVEKRKMMPRPKGSKRAPKSPEQRRKISDAISAKWADPEYRDRVCTALAKYHATAMGAERKRRRRPTGKTPLKMDSVEKKLTEAKSIKSELKSIQKTISKRKRTSIPYKDPMARSKLEMIKRIRAQRVAIEAKKRKAVNRAKLLIAEAEKAAKALELAALKSPLAQASLLETRKLIAEATRSMEKIENGQLTSQDVGDDASFSSGGPTENLHINQRTQSHDEFLDERLVNGMHLLTSGDSNHRDFDFKKFTLQNALNGREPLTAEKCTENSSDVICGDLSSQSRYVRNELEVNNLQVDQLTVNGSVSYDKFTASREELRTSELNECEGSTTFVTKSKRKWVYGRLIEVEED
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(152918..153002,158016..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:152918-197864:1
so has part: feature:152918-153002:1:exon
so has part: feature:158016-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

XP_019710763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152918-153002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158016-158438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197234-197864:1:exon

LOC105057907
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057907 isoform X6
translation: MMAYLDVIAPSHLCEGGTSRNHCPSQQPYSQLFQISNDESSEIDDKERLRRMKISKANKGNVPWNKGRKHSAETLQRIRERTRIAMQDPKVKLKLVNLGHSQSEETRIKIGAGVRQGWRRRRKKLILQESCFVEWRNMIAEAARKGYAGEDELQWDSYKILDEQLKQEWLESVEKRKMMPRPKGSKRAPKSPEQRRKISDAISAKWADPEYRDRVCTALAKYHATAMGAERKRRRRPTGKTPLKMDSVEKKLTEAKSIKSELKSIQKTISKRKRTSIPYKDPMARSKLEMIKRIRAQRVAIEAKKRKAVNRAKLLIAEAEKAAKALELAALKSPLAQASLLETRKLIAEATRSMEKIENGQLTSQDVGDDASFSSGGPTENLHINQRTQSHDEFLDERLVNGMHLLTSGDSNHRDFDFKKFTLQNALNGREPLTAEKCTENSSDVICGDLSSQSRYVRNELEVNNLQVDQLTVNGSVSYDKFTASREELRTSELNECEGSTTFVTKSKRKWVYGRLIEVEED
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(152918..153002,158307..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:152918-197864:1
so has part: feature:152918-153002:1:exon
so has part: feature:158307-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

XP_019710766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152918-153002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158307-158438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197234-197864:1:exon

LOC105057907
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057907
product: uncharacterized LOC105057907, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029268342.1
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(158072..158218,158307..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:158072-197864:1
so has part: feature:158072-158218:1:exon
so has part: feature:158307-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

position:158072:1
position: 158072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158072-158218:1:exon

position:158218:1
position: 158218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158307-158438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197234-197864:1:exon

LOC105057907
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057907 isoform X7
translation: MLKFCSNSDSQLFQISNDESSEIDDKERLRRMKISKANKGNVPWNKGRKHSAETLQRIRERTRIAMQDPKVKLKLVNLGHSQSEETRIKIGAGVRQGWRRRRKKLILQESCFVEWRNMIAEAARKGYAGEDELQWDSYKILDEQLKQEWLESVEKRKMMPRPKGSKRAPKSPEQRRKISDAISAKWADPEYRDRVCTALAKYHATAMGAERKRRRRPTGKTPLKMDSVEKKLTEAKSIKSELKSIQKTISKRKRTSIPYKDPMARSKLEMIKRIRAQRVAIEAKKRKAVNRAKLLIAEAEKAAKALELAALKSPLAQASLLETRKLIAEATRSMEKIENGQLTSQDVGDDASFSSGGPTENLHINQRTQSHDEFLDERLVNGMHLLTSGDSNHRDFDFKKFTLQNALNGREPLTAEKCTENSSDVICGDLSSQSRYVRNELEVNNLQVDQLTVNGSVSYDKFTASREELRTSELNECEGSTTFVTKSKRKWVYGRLIEVEED
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(158282..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:158282-197864:1
so has part: feature:158282-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

XP_029124174.1
type: Protein
SIO_000068: ncbiprotein

position:158282:1
position: 158282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158282-158438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197234-197864:1:exon

LOC105057907
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057907 isoform X8
translation: MKISKANKGNVPWNKGRKHSAETLQRIRERTRIAMQDPKVKLKLVNLGHSQSEETRIKIGAGVRQGWRRRRKKLILQESCFVEWRNMIAEAARKGYAGEDELQWDSYKILDEQLKQEWLESVEKRKMMPRPKGSKRAPKSPEQRRKISDAISAKWADPEYRDRVCTALAKYHATAMGAERKRRRRPTGKTPLKMDSVEKKLTEAKSIKSELKSIQKTISKRKRTSIPYKDPMARSKLEMIKRIRAQRVAIEAKKRKAVNRAKLLIAEAEKAAKALELAALKSPLAQASLLETRKLIAEATRSMEKIENGQLTSQDVGDDASFSSGGPTENLHINQRTQSHDEFLDERLVNGMHLLTSGDSNHRDFDFKKFTLQNALNGREPLTAEKCTENSSDVICGDLSSQSRYVRNELEVNNLQVDQLTVNGSVSYDKFTASREELRTSELNECEGSTTFVTKSKRKWVYGRLIEVEED
SIO_010081: LOC105057907
subclass of: SO_0000673
so part of: LOC105057907
location: join(158375..158438,158536..158588,159652..159689,196018..196336,196583..196893,197234..197864)
location: region:158375-197864:1
so has part: feature:158375-158438:1:exon
so has part: feature:158536-158588:1:exon
so has part: feature:159652-159689:1:exon
so has part: feature:196018-196336:1:exon
so has part: feature:196583-196893:1:exon
so has part: feature:197234-197864:1:exon

XP_029124175.1
type: Protein
SIO_000068: ncbiprotein

position:158375:1
position: 158375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158375-158438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158536-158588:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:159652-159689:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196018-196336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196583-196893:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197234-197864:1:exon

LOC105057906
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057906
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 833949..838243
location: region:833949-838243:1
so has part: feature:833949-838243:1:exon
subclass of: SO_0000010

105057906
type: Gene
SIO_000068: ncbigene

position:833949:1
position: 833949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838243:1
position: 838243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833949-838243:1:exon

LOC105057906
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057906
product: trans-resveratrol di-O-methyltransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_010940625.2
SIO_010081: LOC105057906
subclass of: SO_0000673
so part of: LOC105057906
location: join(833949..834811,837804..838243)
location: region:833949-838243:1
so has part: feature:833949-834811:1:exon
so has part: feature:837804-838243:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:833949-834811:1:exon

position:834811:1
position: 834811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:837804-838243:1:exon

position:837804:1
position: 837804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057906
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057906
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trans-resveratrol di-O-methyltransferase
translation: MEGRTMGEDILEELEAQGNVWNHTFSFVNSMSLKCAVELGIPDAIHGHGSPVTLSELSAMLSLPPRRTAALRRLMRMLVHSGCFAKDVVGDGEEGAYVLTPFSRLLLKEKRTSVSAYVLGMLDPLLIQTWHSLSAWFHGEERTPFRLAHGKGIFEAAAERPELASFLNAAMASDSQLVGEVMVRECSEAFKGVKSLVDVGGCTGTMAMIIAEAFPDIKCTVFDLPHIVAAAAAEAKTPAAVDFVGGDMFERVPPADVALLKWILHDWSDDDCVKILRRCKEAIPSKENGGKLIIVDAVVKAGDDGSNKTTETQLFFDMLMMVNSGGMQREEKEWSKIFFDAGFSNYKINPVMGLRSIIEVYP
SIO_010081: LOC105057906
subclass of: SO_0000673
so part of: LOC105057906
location: join(834029..834811,837804..838109)
location: region:834029-838109:1
so has part: feature:834029-834811:1:exon
so has part: feature:837804-838109:1:exon

XP_010938927.1
type: Protein
SIO_000068: ncbiprotein

position:834029:1
position: 834029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838109:1
position: 838109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:834029-834811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:837804-838109:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 51953
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 838559..838658
location: region:838559-838658:1
so has part: feature:838559-838658:1:region

position:838559:1
position: 838559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838658:1
position: 838658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838559-838658:1:region

LOC105057909
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 844892..873910
location: region:844892-873910:1
so has part: feature:844892-873910:1:exon
subclass of: SO_0000010

105057909
type: Gene
SIO_000068: ncbigene

position:844892:1
position: 844892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873910:1
position: 873910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:844892-873910:1:exon

LOC105057909
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057909
product: uncharacterized LOC105057909
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_010940627.2
SIO_010081: LOC105057909
subclass of: SO_0000673
so part of: LOC105057909
location: join(844892..845971,873472..873910)
location: region:844892-873910:1
so has part: feature:844892-845971:1:exon
so has part: feature:873472-873910:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:844892-845971:1:exon

position:845971:1
position: 845971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:873472-873910:1:exon

position:873472:1
position: 873472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057909
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057909
translation: MESISISIDAIHSYYTKEREIYSRMVFTLGMDPTRAMEIISFWLWVEDDSHVNIISQIYSFDDDTMLKVALVALNFVESLCLNHQSGVDDSFVNIQLNHKFRQKAICGINYFLTNVCYKTLDDIRRKAERDDEIRKMEVLVEQMSQIYLDCRSPNRRFKSDGDIINPFKDDAVRFSNFASLENHDFKMKNSHIGHLYVPHGEGTSRSGVRRKDSHEDSDMHRSWFHPDFIDIKTTSHVDYPFNIHFKNHTGNPKFQLENHIGSIPMVGASFDPHQIVLDDHLVNMGKNILQHYNPVRLESSLRSTGLCSQPQHNIPRDERTLFVTFSNGYPLTEDDLYSFFMRNYGDVESISIEETKEERPPLYAHVSFRSLDTILRILNGNVKVKFMTKGKHLWARRFIPKKKFKSNE
SIO_010081: LOC105057909
subclass of: SO_0000673
so part of: LOC105057909
location: join(844944..845971,873472..873673)
location: region:844944-873673:1
so has part: feature:844944-845971:1:exon
so has part: feature:873472-873673:1:exon

XP_010938929.1
type: Protein
SIO_000068: ncbiprotein

position:844944:1
position: 844944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873673:1
position: 873673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:844944-845971:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:873472-873673:1:exon

LOC105057910
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057910
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1100866..1112641)
location: region:1100866-1112641:-1
so has part: feature:1100866-1112641:-1:exon
subclass of: SO_0000010

105057910
type: Gene
SIO_000068: ncbigene

position:1100866:-1
position: 1100866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112641:-1
position: 1112641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1100866-1112641:-1:exon

LOC105057910
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057910
product: serine--tRNA ligase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_010940628.3
SIO_010081: LOC105057910
subclass of: SO_0000673
so part of: LOC105057910
location: complement(join(1100866..1101078,1101188..1101391,1101506..1101685,1101770..1101953,1102070..1102173,1110796..1110989,1111674..1111779,1111863..1112024,1112110..1112180,1112272..1112641))
location: region:1100866-1112641:-1
so has part: feature:1112272-1112641:-1:exon
so has part: feature:1112110-1112180:-1:exon
so has part: feature:1111863-1112024:-1:exon
so has part: feature:1111674-1111779:-1:exon
so has part: feature:1110796-1110989:-1:exon
so has part: feature:1102070-1102173:-1:exon
so has part: feature:1101770-1101953:-1:exon
so has part: feature:1101506-1101685:-1:exon
so has part: feature:1101188-1101391:-1:exon
so has part: feature:1100866-1101078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1112272-1112641:-1:exon

position:1112272:-1
position: 1112272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1112110-1112180:-1:exon

position:1112110:-1
position: 1112110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112180:-1
position: 1112180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1111863-1112024:-1:exon

position:1111863:-1
position: 1111863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112024:-1
position: 1112024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1111674-1111779:-1:exon

position:1111674:-1
position: 1111674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1111779:-1
position: 1111779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1110796-1110989:-1:exon

position:1110796:-1
position: 1110796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110989:-1
position: 1110989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1102070-1102173:-1:exon

position:1102070:-1
position: 1102070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102173:-1
position: 1102173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1101770-1101953:-1:exon

position:1101770:-1
position: 1101770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101953:-1
position: 1101953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1101506-1101685:-1:exon

position:1101506:-1
position: 1101506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101685:-1
position: 1101685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1101188-1101391:-1:exon

position:1101188:-1
position: 1101188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101391:-1
position: 1101391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1100866-1101078:-1:exon

position:1101078:-1
position: 1101078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057910
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine--tRNA ligase
translation: MLDINLFRAEKGFDPEIVRESQRRRFASVDIVDEIIRLDKEWRQRQFELESLRKDFNRINKEVARLKIAKEDATEMIKSTEENKKLTAAKEVEVQEAKAALDARVETVGNLVHDSVPISNDEANNAVIRTWGERRMEGKWRNHVDLVRLLDIVDMEKGADVAGGRGFYLKGEGVLLNMALISFGLAFLRKRNYQPMQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHLNDRIYPSDLPVRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNNNDSWEMHEEMIKSSEDFYKELNIPYQVVAIVSGALNDAAAKKYDLEGWFPASQTYRELVSCSNCTDYQSRRLGIGYGQKKNDEQAKQYVHMLNSTLTATERTICCILENYQREDGVEIPKVLQPLMGGLEFLPFKLSPETKSKKTKAKGNTGS
SIO_010081: LOC105057910
subclass of: SO_0000673
so part of: LOC105057910
location: complement(join(1101061..1101078,1101188..1101391,1101506..1101685,1101770..1101953,1102070..1102173,1110796..1110989,1111674..1111779,1111863..1112024,1112110..1112180,1112272..1112404))
location: region:1101061-1112404:-1
so has part: feature:1112272-1112404:-1:exon
so has part: feature:1112110-1112180:-1:exon
so has part: feature:1111863-1112024:-1:exon
so has part: feature:1111674-1111779:-1:exon
so has part: feature:1110796-1110989:-1:exon
so has part: feature:1102070-1102173:-1:exon
so has part: feature:1101770-1101953:-1:exon
so has part: feature:1101506-1101685:-1:exon
so has part: feature:1101188-1101391:-1:exon
so has part: feature:1101061-1101078:-1:exon

XP_010938930.1
type: Protein
SIO_000068: ncbiprotein

position:1101061:-1
position: 1101061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112404:-1
position: 1112404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112272-1112404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1112110-1112180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1111863-1112024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1111674-1111779:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1110796-1110989:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1102070-1102173:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1101770-1101953:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1101506-1101685:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1101188-1101391:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1101061-1101078:-1:exon

LOC105057916
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057916
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1228733..1232295)
location: region:1228733-1232295:-1
so has part: feature:1228733-1232295:-1:exon
subclass of: SO_0000010

105057916
type: Gene
SIO_000068: ncbigene

position:1228733:-1
position: 1228733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232295:-1
position: 1232295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1228733-1232295:-1:exon

LOC105057916
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057916
product: putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940637.3
SIO_010081: LOC105057916
subclass of: SO_0000673
so part of: LOC105057916
location: complement(1228733..1232295)
location: region:1228733-1232295:-1
so has part: feature:1228733-1232295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1228733-1232295:-1:exon

LOC105057916
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057916
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial
translation: MRNFYRRFPFDSLSCENIPIPRHFLSHHSRVPTRFRSATKIPASSSSSSKDTRAKSPALLPLYQEITELVAEKPTVDGEASFRKPVAENGSSSACQIARESERSLNAKQQAQAKNSEFEDVSPIVQRVTEIVRLEKSEIRMGQRLDELGLSFSSEIVEKVLKRCFKVGHLALRFFNWVKLQPGFCHTTQTYNVMIYIAGEAEEIDLMEKLMNEMEDELCTKDIKTWTTLISYYGKAKQIGKALSTFEAMRKSGCEPDAGVYKAILRALFNVRKAELSMEFYKEMVSKNMLVDASLYQLLMSCLARSGDVTAVRLVGDDMIKIAKLSESQVYTCILRSFCITGRIEDARHLFEEIKKKNLLVDLKVSEVLVKGLCRASKMDDAIEIVNNMKQSSAIDCRVYGCLLDGFIRQGDVTKALQLLHDMRELGCLPMVSSYTQMIQYLFRLDEYGKACELYEKMLKDGIEPDIVAITAMVAGHVRHNQISEAWVAFEGMKKKGMKPTWKAYAVFIKELCKASKPNEAYNLLKEMLDSDMNATDGIYRLVISSLTRNGELEKARKVEQMQTSLKLQSLGNKMVCQSADHPSCHEEHKRSNCSFNQDINYTQKAEAYSETDFKEVCRILSSSTNWNSIYEVLERSMIHFTPVLVEAVLRSYHSHSGAALRFFSWVGNQSGYEHTAETYNMAIKLAGSAKDFKHMRYLCQEMRRSGCSVTPNTWTIMIAQYGQAGLTEIALRTFKDMKSDGYQPNGSTYKYLILFLCGKKGRKVDEAIKFFQEMIHVGYMPDKELLGFYLSSLCESGKLMDAKGSVKSLCKRGFAKELGYSLLIKSLCRAGKVEEALILTEEMDKVGCSVDQYIYGSLVHALLRQGRLDEALDKLERMKEAGLSQTVHIHTSLIVHFCKEKQIRKAVDIFKKMREDGYEPTVVTYSALIRGYMNMGMISDAWEIFHWMKLKGPFPDFETYSMFMTCLCKVGRSEDGLKLINEMLECGIIPSAVNFRTVFHGLNREGKQELAHSVLQTKWLLKRERMFMY
SIO_010081: LOC105057916
subclass of: SO_0000673
so part of: LOC105057916
location: complement(1228877..1231969)
location: region:1228877-1231969:-1
so has part: feature:1228877-1231969:-1:exon

XP_010938939.1
type: Protein
SIO_000068: ncbiprotein

position:1228877:-1
position: 1228877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231969:-1
position: 1231969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1228877-1231969:-1:exon

LOC105057911
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057911
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1378767..1392913
location: region:1378767-1392913:1
so has part: feature:1378767-1392913:1:exon
subclass of: SO_0000010

105057911
type: Gene
SIO_000068: ncbigene

position:1378767:1
position: 1378767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1392913:1
position: 1392913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378767-1392913:1:exon

LOC105057911
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057911
product: uncharacterized LOC105057911
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_010940629.2
SIO_010081: LOC105057911
subclass of: SO_0000673
so part of: LOC105057911
location: join(1378767..1379119,1392368..1392913)
location: region:1378767-1392913:1
so has part: feature:1378767-1379119:1:exon
so has part: feature:1392368-1392913:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378767-1379119:1:exon

position:1379119:1
position: 1379119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1392368-1392913:1:exon

position:1392368:1
position: 1392368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057911
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057911
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057911
translation: MGWKWVDDESSDSLASGRGFGELGELVNPNARSGEDRCLTRRVVKSSCRTEEVEPGRFVKKCEMTEQTLRDCIGRPIEVVESKTEHTEEDVTDEVTRGVAPFDSAIIEPFTFPGLRGDIEAMERGLFGGLNRFLESAEEMTNEFFRSFGIPSWQGRESNFGRWKPADKQQHERDPSEQINESPYSEYAGEIRDV
SIO_010081: LOC105057911
subclass of: SO_0000673
so part of: LOC105057911
location: join(1378896..1379119,1392368..1392728)
location: region:1378896-1392728:1
so has part: feature:1378896-1379119:1:exon
so has part: feature:1392368-1392728:1:exon

XP_010938931.1
type: Protein
SIO_000068: ncbiprotein

position:1378896:1
position: 1378896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1392728:1
position: 1392728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378896-1379119:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1392368-1392728:1:exon

LOC105057912
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1397898..1406289
location: region:1397898-1406289:1
so has part: feature:1397898-1406289:1:exon
subclass of: SO_0000010

105057912
type: Gene
SIO_000068: ncbigene

position:1397898:1
position: 1397898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1406289:1
position: 1406289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1397898-1406289:1:exon

LOC105057912
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057912
product: calcium-dependent protein kinase 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_010940631.3
SIO_010081: LOC105057912
subclass of: SO_0000673
so part of: LOC105057912
location: join(1397898..1399220,1401014..1401157,1401262..1401414,1401855..1401970,1403939..1404106,1405608..1405832,1405933..1406289)
location: region:1397898-1406289:1
so has part: feature:1397898-1399220:1:exon
so has part: feature:1401014-1401157:1:exon
so has part: feature:1401262-1401414:1:exon
so has part: feature:1401855-1401970:1:exon
so has part: feature:1403939-1404106:1:exon
so has part: feature:1405608-1405832:1:exon
so has part: feature:1405933-1406289:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1397898-1399220:1:exon

position:1399220:1
position: 1399220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1401014-1401157:1:exon

position:1401014:1
position: 1401014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1401157:1
position: 1401157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1401262-1401414:1:exon

position:1401262:1
position: 1401262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1401414:1
position: 1401414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1401855-1401970:1:exon

position:1401855:1
position: 1401855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1401970:1
position: 1401970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1403939-1404106:1:exon

position:1403939:1
position: 1403939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1404106:1
position: 1404106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1405608-1405832:1:exon

position:1405608:1
position: 1405608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1405832:1
position: 1405832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1405933-1406289:1:exon

position:1405933:1
position: 1405933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057912
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-dependent protein kinase 10
translation: MGNACVGPSITKTRFFQSVSATLWRVRSPEDVLPHTNGEEASTAPAKTTTEPPDPIKIHEEEETKPAKPSPQVESKPENELHPPKSKNKKPHHVKRASSAGLLTDSVLRHKTENLKDVYSIGRKLGQGQFGTTYLCLEKATGKEYACKSILKRKLTTDDDVEDVRREIQIMHHLSGHPNVISIKGAYEDAVAVHVVMDLCGGGELFDRIIQKGHYTERKAAELARVIVGVVEVCHSLGVMHRDLKPENFLFVNQTEEAPLKTIDFGLSIFFQPGEIFTDVVGSPYYVAPEVLKKRYGPEADVWSAGVIIYILLSGVPPFWAETEQGIFEEVLHGKLDFESDPWPSISESAKDLVQRMLVRDPKKRLTAHEVLCHPWVQVDGVAPDKPLASAVLSRLKQFSAMNKLKKMAIRVIAESLSEDEIAGLKEMFKMIDTDNSGQITFEELKAGLERVGANLKESEIYALMQAADVDNSGTIDYGEFVAATLHLNKIEREDHLFAAFSYFDKDGSGYITQDELQQACEEFGIQDVQLEEMIREVDQDNDGRIDYNEFVAMMQKGNAGFGKKGLQNSFSIGFREALRLG
SIO_010081: LOC105057912
subclass of: SO_0000673
so part of: LOC105057912
location: join(1398401..1399220,1401014..1401157,1401262..1401414,1401855..1401970,1403939..1404106,1405608..1405832,1405933..1406055)
location: region:1398401-1406055:1
so has part: feature:1398401-1399220:1:exon
so has part: feature:1401014-1401157:1:exon
so has part: feature:1401262-1401414:1:exon
so has part: feature:1401855-1401970:1:exon
so has part: feature:1403939-1404106:1:exon
so has part: feature:1405608-1405832:1:exon
so has part: feature:1405933-1406055:1:exon

XP_010938933.1
type: Protein
SIO_000068: ncbiprotein

position:1398401:1
position: 1398401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1406055:1
position: 1406055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1398401-1399220:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1401014-1401157:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1401262-1401414:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1401855-1401970:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1403939-1404106:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1405608-1405832:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1405933-1406055:1:exon

LOC105057913
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1427791..1430677)
location: region:1427791-1430677:-1
so has part: feature:1427791-1430677:-1:exon
subclass of: SO_0000010

105057913
type: Gene
SIO_000068: ncbigene

position:1427791:-1
position: 1427791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430677:-1
position: 1430677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427791-1430677:-1:exon

LOC105057913
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057913
product: fasciclin-like arabinogalactan protein 17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019855252.2
SIO_010081: LOC105057913
subclass of: SO_0000673
so part of: LOC105057913
location: complement(join(1427791..1428241,1429115..1429698,1429767..1430677))
location: region:1427791-1430677:-1
so has part: feature:1429767-1430677:-1:exon
so has part: feature:1429115-1429698:-1:exon
so has part: feature:1427791-1428241:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1429767-1430677:-1:exon

position:1429767:-1
position: 1429767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1429115-1429698:-1:exon

position:1429115:-1
position: 1429115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1429698:-1
position: 1429698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1427791-1428241:-1:exon

position:1428241:-1
position: 1428241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057913
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fasciclin-like arabinogalactan protein 17
translation: MDSQIYGGASRILFLVLLISATSVSPALPENPISRSTLPSASSGSGSGQINSNSVLVALLDSHYTELAELVEKALLLQTLEDAVGRHNVTIFAPRNEALERDLDPEFKRFLLEPRNLKSLQTLILFHVIPTRIGSDSWPPSEAARHRTLAADHLHLSGSGAAKRVDIAAVVHPDAVVRPDGVIHGIERLLVPRSVQEDFNRRRSLASISAILPTGAPEVDPRTHRLKKPAPPPAPAALLRPSPSTTQWPLAXSIAPAPAPGPGSGKHWFDGESQVKDFIHTLLLYGGYNELADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTADQLSEPGAPEQIVYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGQGEGSAYLFDPDIYTDGRISVQGIDAVLFPPEEETPAAVAPTALRKTVQAAKPRRGKLLELGCQMVGAFGQRARFTSCQ
SIO_010081: LOC105057913
subclass of: SO_0000673
so part of: LOC105057913
location: complement(join(1428168..1428241,1429115..1429698,1429767..1430518))
location: region:1428168-1430518:-1
so has part: feature:1429767-1430518:-1:exon
so has part: feature:1429115-1429698:-1:exon
so has part: feature:1428168-1428241:-1:exon

XP_019710811.1
type: Protein
SIO_000068: ncbiprotein

position:1428168:-1
position: 1428168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430518:-1
position: 1430518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1429767-1430518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1429115-1429698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1428168-1428241:-1:exon

LOC105057914
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1748505..>1753980)
location: region:1748505-1753980:-1
so has part: feature:1748505-1753980:-1:exon
subclass of: SO_0000010

105057914
type: Gene
SIO_000068: ncbigene

position:1748505:-1
position: 1748505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1753980:-1
position: 1753980
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1748505-1753980:-1:exon

LOC105057914
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057914
product: protein DELETION OF SUV3 SUPPRESSOR 1(I)
inference: similar to RNA sequence, mRNA (same species):INSD:GBSV01013745.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 183 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_029268343.1
SIO_010081: LOC105057914
subclass of: SO_0000673
so part of: LOC105057914
location: complement(join(1748505..1748877,1753923..>1753980))
location: region:1748505-1753980:-1
so has part: feature:1753923-1753980:-1:exon
so has part: feature:1748505-1748877:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1753923-1753980:-1:exon

position:1753923:-1
position: 1753923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1748505-1748877:-1:exon

position:1748877:-1
position: 1748877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057914
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057914
inference: similar to RNA sequence, mRNA (same species):INSD:GBSV01013745.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 36 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein DELETION OF SUV3 SUPPRESSOR 1(I)
translation: MATENKPAAAEDAKIDLFEDDDEFEEFEIDQEWDDNEEGEEAMQQWEDDWDDDDVTDDFSLQLRRELESNSEKS
SIO_010081: LOC105057914
subclass of: SO_0000673
so part of: LOC105057914
location: complement(join(1748747..1748877,1753923..>1753980))
location: region:1748747-1753980:-1
so has part: feature:1753923-1753980:-1:exon
so has part: feature:1748747-1748877:-1:exon

XP_029124176.1
type: Protein
SIO_000068: ncbiprotein

position:1748747:-1
position: 1748747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1753923-1753980:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1748747-1748877:-1:exon

LOC105057915
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057915
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1785002..1790469)
location: region:1785002-1790469:-1
so has part: feature:1785002-1790469:-1:exon
subclass of: SO_0000010

105057915
type: Gene
SIO_000068: ncbigene

position:1785002:-1
position: 1785002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1790469:-1
position: 1790469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1785002-1790469:-1:exon

LOC105057915
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057915
product: BEL1-like homeodomain protein 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_019854968.2
SIO_010081: LOC105057915
subclass of: SO_0000673
so part of: LOC105057915
location: complement(join(1785002..1785831,1786530..1786590,1787308..1787693,1788946..1790469))
location: region:1785002-1790469:-1
so has part: feature:1788946-1790469:-1:exon
so has part: feature:1787308-1787693:-1:exon
so has part: feature:1786530-1786590:-1:exon
so has part: feature:1785002-1785831:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1788946-1790469:-1:exon

position:1788946:-1
position: 1788946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1787308-1787693:-1:exon

position:1787308:-1
position: 1787308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1787693:-1
position: 1787693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1786530-1786590:-1:exon

position:1786530:-1
position: 1786530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1786590:-1
position: 1786590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1785002-1785831:-1:exon

position:1785831:-1
position: 1785831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057915
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: BEL1-like homeodomain protein 4
translation: MGIATPPSPQPARPYLSPPKPVSRPPYRPNLPTSMSQGYHHGVFSFSYGFDRSASQEQQDPIAQQSRRDKLRVQGLDPGGHPLVPTEEEGEDSGIYESATTTAATAQANNMLSEIFSFPTMPATPTSDLLSSQISTSYRQPQRLGMMAGFSGDWYSANRQGVVLGGTNLSSFGDSTEKHHHGGSQQHHPMFGLNADSTAAMQLFLMNSTLPPLLQQHHHQRSPSPSPPAPPPTLRRHHHQAFQSFGDASFSGGVVESQGLSLSLSSSLQQFEMPKVEELRVQDGVLYNFNNQAQQQQDHHHLSLHLQGHGHGQPVRMGYGTTAVVNVLRNSKYARAVRELLEEFCSVVRGQLKGSRIGMNRGSSSNPNPSHGVGGGASSSVAGASSSSKDLPPLCPADRFEHQRKKAKLISMLDEVDRRYNHYCDQMQMVVNCFDSVMGFGAATPYTALAQKAMSRHFRCLKDAIAAQLKQTCELLGEKEAGSSSGLTKAETPRLRLVDPSLRQQKAFQQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRSQVSNWFINARVRLWKPMVEEMYQQEAKEEVGERERNEASHHQGALSPTLQQPQGQRLGTGAPSESDPYPAAPPASQHHHHLFATSSSNENPPPAVAHSSNGGAGGGDDTLLVRIVAPEFCGSDVQVGPTDDMYRNGTSSAATLGPAAPMRFGTAGDVSLTLGLRHVGGNASEKGRFSAKDFGGC
SIO_010081: LOC105057915
subclass of: SO_0000673
so part of: LOC105057915
location: complement(join(1785280..1785831,1786530..1786590,1787308..1787693,1788946..1790192))
location: region:1785280-1790192:-1
so has part: feature:1788946-1790192:-1:exon
so has part: feature:1787308-1787693:-1:exon
so has part: feature:1786530-1786590:-1:exon
so has part: feature:1785280-1785831:-1:exon

XP_019710527.1
type: Protein
SIO_000068: ncbiprotein

position:1785280:-1
position: 1785280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1790192:-1
position: 1790192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1788946-1790192:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1787308-1787693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1786530-1786590:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1785280-1785831:-1:exon

LOC114914846
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC114914846
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1888952..1889057
location: region:1888952-1889057:1
so has part: feature:1888952-1889057:1:exon
subclass of: SO_0000578

114914846
type: Gene
SIO_000068: ncbigene

position:1888952:1
position: 1888952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1889057:1
position: 1889057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1888952-1889057:1:exon

LOC114914846
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51953
nc RNA class: snoRNA
gene: LOC114914846
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003802705.1
SIO_010081: LOC114914846
subclass of: SO_0000673
so part of: LOC114914846
location: 1888952..1889057
location: region:1888952-1889057:1
so has part: feature:1888952-1889057:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1888952-1889057:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 51953
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1903612..1903711
location: region:1903612-1903711:1
so has part: feature:1903612-1903711:1:region

position:1903612:1
position: 1903612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1903711:1
position: 1903711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1903612-1903711:1:region

LOC105057917
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2098146..2103796
location: region:2098146-2103796:1
so has part: feature:2098146-2103796:1:exon
subclass of: SO_0000010

105057917
type: Gene
SIO_000068: ncbigene

position:2098146:1
position: 2098146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2103796:1
position: 2103796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2098146-2103796:1:exon

LOC105057917
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057917
product: myosin heavy chain, embryonic smooth muscle isoform
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_010940638.3
SIO_010081: LOC105057917
subclass of: SO_0000673
so part of: LOC105057917
location: join(2098146..2098656,2098732..2099022,2099161..2099376,2102399..2102629,2103140..2103796)
location: region:2098146-2103796:1
so has part: feature:2098146-2098656:1:exon
so has part: feature:2098732-2099022:1:exon
so has part: feature:2099161-2099376:1:exon
so has part: feature:2102399-2102629:1:exon
so has part: feature:2103140-2103796:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2098146-2098656:1:exon

position:2098656:1
position: 2098656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2098732-2099022:1:exon

position:2098732:1
position: 2098732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2099022:1
position: 2099022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2099161-2099376:1:exon

position:2099161:1
position: 2099161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2099376:1
position: 2099376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2102399-2102629:1:exon

position:2102399:1
position: 2102399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2102629:1
position: 2102629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2103140-2103796:1:exon

position:2103140:1
position: 2103140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057917
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin heavy chain, embryonic smooth muscle isoform
translation: MAARRGKWHPPPAPTPRIIHLPRRSRLSRSAKAALAAAKARPTRLPSVSRRNLGVLLDEERTFAGGGSERRASPGESHGGSGEERWRFQVEILRAECNFLRMEREVVRRKLERNRAQMETILRSAVETLISGSKKIDGSESVVTALKEEIEELEEKLEELQLERSGRRRGKERSCGRNFDRQASVLRRQLEKMADETSVRQVREIAAEEKNDKENSPLQSDRPCRFPDVEMLRRRMEGLSKEMLERMEEYGCLLSANSSFYSHSTTVSRSESKMMRCCSRRRVIEHTEMAVKSQHCHPQQVEEEKGWAVMGSENCCNCKKVVRRIMEEVRSETEQWSEMQGMLEQVRVEMEELQSSRDLWQHRSITSEMNIHSIQTQMLEWKRRARASEHKMTELQKQVSSELQIKLQSTRAELFLPPTSSSQTHSEKWNQDLQRIKDQQQRLLDSHREKEKHVLVCRLKNPHCNFSQRLPLQAIGNNFPTFRP
SIO_010081: LOC105057917
subclass of: SO_0000673
so part of: LOC105057917
location: join(2098264..2098656,2098732..2099022,2099161..2099376,2102399..2102629,2103140..2103463)
location: region:2098264-2103463:1
so has part: feature:2098264-2098656:1:exon
so has part: feature:2098732-2099022:1:exon
so has part: feature:2099161-2099376:1:exon
so has part: feature:2102399-2102629:1:exon
so has part: feature:2103140-2103463:1:exon

XP_010938940.1
type: Protein
SIO_000068: ncbiprotein

position:2098264:1
position: 2098264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2103463:1
position: 2103463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2098264-2098656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2098732-2099022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2099161-2099376:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2102399-2102629:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2103140-2103463:1:exon

LOC105057918
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2176643..2177319)
location: region:2176643-2177319:-1
so has part: feature:2176643-2177319:-1:exon
subclass of: SO_0000010

105057918
type: Gene
SIO_000068: ncbigene

position:2176643:-1
position: 2176643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2177319:-1
position: 2177319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2176643-2177319:-1:exon

LOC105057918
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057918
product: uncharacterized LOC105057918
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940640.2
SIO_010081: LOC105057918
subclass of: SO_0000673
so part of: LOC105057918
location: complement(2176643..2177319)
location: region:2176643-2177319:-1
so has part: feature:2176643-2177319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2176643-2177319:-1:exon

LOC105057918
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057918
translation: MAAFPVGHSLHTTHNNPLRLSKPTPRAKFSLCCRSHLSSGPTGNSEEKIETKGGKNMEQKRWWRLLFELCGDAGKVGRELKKSLSPKQKGDWKDVVLMSFSFAVYVYISQKIVCAYCAWVTMNNRF
SIO_010081: LOC105057918
subclass of: SO_0000673
so part of: LOC105057918
location: complement(2176809..2177189)
location: region:2176809-2177189:-1
so has part: feature:2176809-2177189:-1:exon

XP_010938942.1
type: Protein
SIO_000068: ncbiprotein

position:2176809:-1
position: 2176809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2177189:-1
position: 2177189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2176809-2177189:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 51953
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 2260762..2260861
location: region:2260762-2260861:1
so has part: feature:2260762-2260861:1:region

position:2260762:1
position: 2260762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2260861:1
position: 2260861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2260762-2260861:1:region

LOC105057919
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2334092..2339372
location: region:2334092-2339372:1
so has part: feature:2334092-2339372:1:exon
subclass of: SO_0000010

105057919
type: Gene
SIO_000068: ncbigene

position:2334092:1
position: 2334092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2339372:1
position: 2339372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2334092-2339372:1:exon

LOC105057919
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057919
product: truncated FRIGIDA-like protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_010940641.1
SIO_010081: LOC105057919
subclass of: SO_0000673
so part of: LOC105057919
location: join(2334092..2334980,2338357..2338532,2338619..2339372)
location: region:2334092-2339372:1
so has part: feature:2334092-2334980:1:exon
so has part: feature:2338357-2338532:1:exon
so has part: feature:2338619-2339372:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2334092-2334980:1:exon

position:2334980:1
position: 2334980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2338357-2338532:1:exon

position:2338357:1
position: 2338357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2338532:1
position: 2338532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2338619-2339372:1:exon

position:2338619:1
position: 2338619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057919
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: truncated FRIGIDA-like protein 1
translation: MATADLAEAIKAIPLKKEELRKAFEALQSFSPAIASFTLKWRDLEDHFSSIERSIDLRLKELESKSISATPSPPAAAVVKAEANADGEAEVLSRPELRSLCIKMDGVGLRSYIVENRKDLPMIKNALDAAIRLASDPAKLVLDAMDGFYRPKSEGEKEGNLQAIRRTCLNLLERLRVVAPEIKPSVREKAKELAVEWKGKILDGAENVLAFLQLVASYGLASDFNRDEILDLLISVSRRKQALDLCKSLGVMENMADLIGGLNSKGRQLDAVKFIHALNLMDKYPPVPILKAYLKESKKAAQEVRKKGNNSIKSQNEAIVKELAALKAVIGAIKEYKLESEYSCETLKKRIAQLEQQKAGTKRKATAAVAAVDSSSNAEKQQQYSNKRPRSTIKTPAAESQSCVPLVQNQSQLGLIHNAPYMGSAGLYARPISGDFYGHPGPSISGTHLGLHSGSSVPAASLGLGGNHLRRSYLYPSESLAGSSLYDRPATYGGRPLSPYGSSLYPYDMGMNM
SIO_010081: LOC105057919
subclass of: SO_0000673
so part of: LOC105057919
location: join(2334212..2334980,2338357..2338532,2338619..2339215)
location: region:2334212-2339215:1
so has part: feature:2334212-2334980:1:exon
so has part: feature:2338357-2338532:1:exon
so has part: feature:2338619-2339215:1:exon

XP_010938943.1
type: Protein
SIO_000068: ncbiprotein

position:2334212:1
position: 2334212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2339215:1
position: 2339215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2334212-2334980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2338357-2338532:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2338619-2339215:1:exon

LOC114914844
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC114914844
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2337188..2337276
location: region:2337188-2337276:1
so has part: feature:2337188-2337276:1:exon
subclass of: SO_0000578

114914844
type: Gene
SIO_000068: ncbigene

position:2337188:1
position: 2337188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2337276:1
position: 2337276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2337188-2337276:1:exon

LOC114914844
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51953
nc RNA class: snoRNA
gene: LOC114914844
product: small nucleolar RNA SNORD96 family
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00055
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003802703.1
SIO_010081: LOC114914844
subclass of: SO_0000673
so part of: LOC114914844
location: 2337188..2337276
location: region:2337188-2337276:1
so has part: feature:2337188-2337276:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2337188-2337276:1:exon

LOC114914843
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC114914843
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2338110..2338200
location: region:2338110-2338200:1
so has part: feature:2338110-2338200:1:exon
subclass of: SO_0000578

114914843
type: Gene
SIO_000068: ncbigene

position:2338110:1
position: 2338110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2338200:1
position: 2338200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2338110-2338200:1:exon

LOC114914843
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51953
nc RNA class: snoRNA
gene: LOC114914843
product: small nucleolar RNA SNORD96 family
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00055
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003802702.1
SIO_010081: LOC114914843
subclass of: SO_0000673
so part of: LOC114914843
location: 2338110..2338200
location: region:2338110-2338200:1
so has part: feature:2338110-2338200:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2338110-2338200:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 51953
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 2482734..2482833
location: region:2482734-2482833:1
so has part: feature:2482734-2482833:1:region

position:2482734:1
position: 2482734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2482833:1
position: 2482833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2482734-2482833:1:region

LOC105057920
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <2525897..2551501
location: region:2525897-2551501:1
so has part: feature:2525897-2551501:1:exon
subclass of: SO_0000010

105057920
type: Gene
SIO_000068: ncbigene

position:2525897:1
position: 2525897
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:2551501:1
position: 2551501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2525897-2551501:1:exon

LOC105057920
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057920
product: uncharacterized LOC105057920
inference: similar to RNA sequence (same species):INSD:GBSV01005055.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 194 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_010940642.2
SIO_010081: LOC105057920
subclass of: SO_0000673
so part of: LOC105057920
location: join(<2525897..2525920,2526548..2526628,2530125..2530242,2530347..2530441,2542057..2542128,2543574..2543888,2544008..2544116,2549875..2550061,2550735..2551501)
location: region:2525897-2551501:1
so has part: feature:2525897-2525920:1:exon
so has part: feature:2526548-2526628:1:exon
so has part: feature:2530125-2530242:1:exon
so has part: feature:2530347-2530441:1:exon
so has part: feature:2542057-2542128:1:exon
so has part: feature:2543574-2543888:1:exon
so has part: feature:2544008-2544116:1:exon
so has part: feature:2549875-2550061:1:exon
so has part: feature:2550735-2551501:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2525897-2525920:1:exon

position:2525920:1
position: 2525920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2526548-2526628:1:exon

position:2526548:1
position: 2526548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2526628:1
position: 2526628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2530125-2530242:1:exon

position:2530125:1
position: 2530125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2530242:1
position: 2530242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2530347-2530441:1:exon

position:2530347:1
position: 2530347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2530441:1
position: 2530441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2542057-2542128:1:exon

position:2542057:1
position: 2542057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2542128:1
position: 2542128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2543574-2543888:1:exon

position:2543574:1
position: 2543574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2543888:1
position: 2543888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2544008-2544116:1:exon

position:2544008:1
position: 2544008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2544116:1
position: 2544116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2549875-2550061:1:exon

position:2549875:1
position: 2549875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2550061:1
position: 2550061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2550735-2551501:1:exon

position:2550735:1
position: 2550735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057920
translation: MVVCKCRKATRLYCFVHKVPVCGECICFPEHQICVVKKYSDWVIDGEYDWPPKCTLCNAALEAGSDQTTRLGCLHLMHTNCLVSHIQSNPAQTTPAGYICPACSSPVWPPISIKDTGSCLHSKLKEAIIQSGLEKNVFGNHLVSLPAAESRVPPPAFASDPLMRASGVEDRDKSSADSFPKEGKHPDEIYTSAVGTGSTKLSEPEIVEIDGPSSLGNQFKPDQEPNFMKNASPKGPGATTRKGTYHVDRQNSEISYYADDEDGTHKKYTRRGPFRHKFLRMLLPFWSNALPTLPVTAPPRKDLTNSNDVLEGRLRHQRSSRMDPRKLLLVMAIMACLATMGILYYRLAQRSLGEQVPEDEPQ
SIO_010081: LOC105057920
subclass of: SO_0000673
so part of: LOC105057920
location: join(2525897..2525920,2526548..2526628,2530125..2530242,2530347..2530441,2542057..2542128,2543574..2543888,2544008..2544116,2549875..2550061,2550735..2550822)
location: region:2525897-2550822:1
so has part: feature:2525897-2525920:1:exon
so has part: feature:2526548-2526628:1:exon
so has part: feature:2530125-2530242:1:exon
so has part: feature:2530347-2530441:1:exon
so has part: feature:2542057-2542128:1:exon
so has part: feature:2543574-2543888:1:exon
so has part: feature:2544008-2544116:1:exon
so has part: feature:2549875-2550061:1:exon
so has part: feature:2550735-2550822:1:exon

XP_010938944.1
type: Protein
SIO_000068: ncbiprotein

position:2550822:1
position: 2550822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2525897-2525920:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2526548-2526628:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2530125-2530242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2530347-2530441:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2542057-2542128:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2543574-2543888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2544008-2544116:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2549875-2550061:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2550735-2550822:1:exon

LOC105057981
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057981
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2578059..2582589
location: region:2578059-2582589:1
so has part: feature:2578059-2582589:1:exon

105057981
type: Gene
SIO_000068: ncbigene

position:2578059:1
position: 2578059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2582589:1
position: 2582589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2578059-2582589:1:exon

LOC105057981
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105057981
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105057981
subclass of: SO_0000673
so part of: LOC105057981
location: 2578059..2578063
location: region:2578059-2578063:1
so has part: feature:2578059-2578063:1:exon

position:2578063:1
position: 2578063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2578059-2578063:1:exon

LOC105057981
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105057981
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105057981
subclass of: SO_0000673
so part of: LOC105057981
location: 2581542..2582589
location: region:2581542-2582589:1
so has part: feature:2581542-2582589:1:exon

position:2581542:1
position: 2581542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2581542-2582589:1:exon

LOC114914857
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC114914857
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(2594737..2594830)
location: region:2594737-2594830:-1
so has part: feature:2594737-2594830:-1:exon

114914857
type: Gene
SIO_000068: ncbigene

position:2594737:-1
position: 2594737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2594830:-1
position: 2594830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2594737-2594830:-1:exon

LOC114914857
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC114914857
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC114914857
subclass of: SO_0000673
so part of: LOC114914857
location: complement(2594737..2594830)
location: region:2594737-2594830:-1
so has part: feature:2594737-2594830:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2594737-2594830:-1:exon

LOC105057982
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2595618..2597165
location: region:2595618-2597165:1
so has part: feature:2595618-2597165:1:exon
subclass of: SO_0000010

105057982
type: Gene
SIO_000068: ncbigene

position:2595618:1
position: 2595618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2597165:1
position: 2597165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2595618-2597165:1:exon

LOC105057982
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057982
product: uncharacterized LOC105057982
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_029268586.1
SIO_010081: LOC105057982
subclass of: SO_0000673
so part of: LOC105057982
location: join(2595618..2596214,2596315..2596569,2596847..2596912,2597070..2597165)
location: region:2595618-2597165:1
so has part: feature:2595618-2596214:1:exon
so has part: feature:2596315-2596569:1:exon
so has part: feature:2596847-2596912:1:exon
so has part: feature:2597070-2597165:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2595618-2596214:1:exon

position:2596214:1
position: 2596214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2596315-2596569:1:exon

position:2596315:1
position: 2596315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2596569:1
position: 2596569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2596847-2596912:1:exon

position:2596847:1
position: 2596847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2596912:1
position: 2596912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2597070-2597165:1:exon

position:2597070:1
position: 2597070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057982
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057982
translation: MELEGAFDVAMSAEESEIIAHLLGGQQFPNEPDQDPSIGMPPMFWPGHSSDLYYCSDFETNDNPYCVSQGSSSTSTSSFSVPLANNVGCCFSNSNAVPQISTCSTPMDFSIGEEQIIARSIPAVSYHQSSEPICTAEEKGGDEFRGSKEKLSVPVVPPHQTSRDIKKRFHAGDAEQPMTNGRCGTSVGCPKKKARASAPVPKKVKNAQSRKAKTDSTGNEEENNADLNVQSSIYYISEEDSNASQELNGEGGATSSSKGGTLSTSGRRKNGRRSATDPQSLCARVDISTMLEEAVQYVKFLQLQIKLLSSVELWMYAPIAYNGINIGLDLKISPPQQ
SIO_010081: LOC105057982
subclass of: SO_0000673
so part of: LOC105057982
location: join(2595618..2596214,2596315..2596569,2596847..2596912,2597070..2597165)
location: region:2595618-2597165:1
so has part: feature:2595618-2596214:1:exon
so has part: feature:2596315-2596569:1:exon
so has part: feature:2596847-2596912:1:exon
so has part: feature:2597070-2597165:1:exon

XP_029124419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2595618-2596214:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2596315-2596569:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2596847-2596912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2597070-2597165:1:exon

LOC105057921
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2598653..2614813)
location: region:2598653-2614813:-1
so has part: feature:2598653-2614813:-1:exon
subclass of: SO_0000010

105057921
type: Gene
SIO_000068: ncbigene

position:2598653:-1
position: 2598653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2614813:-1
position: 2614813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2598653-2614813:-1:exon

LOC105057921
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057921
product: vacuolar-sorting receptor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_010940643.3
SIO_010081: LOC105057921
subclass of: SO_0000673
so part of: LOC105057921
location: complement(join(2598653..2599245,2599898..2600007,2600092..2600220,2600424..2600490,2600627..2600709,2605884..2605965,2606040..2606116,2606224..2606307,2606375..2606444,2606600..2606688,2606972..2607664,2614176..2614813))
location: region:2598653-2614813:-1
so has part: feature:2614176-2614813:-1:exon
so has part: feature:2606972-2607664:-1:exon
so has part: feature:2606600-2606688:-1:exon
so has part: feature:2606375-2606444:-1:exon
so has part: feature:2606224-2606307:-1:exon
so has part: feature:2606040-2606116:-1:exon
so has part: feature:2605884-2605965:-1:exon
so has part: feature:2600627-2600709:-1:exon
so has part: feature:2600424-2600490:-1:exon
so has part: feature:2600092-2600220:-1:exon
so has part: feature:2599898-2600007:-1:exon
so has part: feature:2598653-2599245:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2614176-2614813:-1:exon

position:2614176:-1
position: 2614176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2606972-2607664:-1:exon

position:2606972:-1
position: 2606972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2607664:-1
position: 2607664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2606600-2606688:-1:exon

position:2606600:-1
position: 2606600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2606688:-1
position: 2606688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2606375-2606444:-1:exon

position:2606375:-1
position: 2606375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2606444:-1
position: 2606444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2606224-2606307:-1:exon

position:2606224:-1
position: 2606224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2606307:-1
position: 2606307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2606040-2606116:-1:exon

position:2606040:-1
position: 2606040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2606116:-1
position: 2606116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2605884-2605965:-1:exon

position:2605884:-1
position: 2605884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2605965:-1
position: 2605965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2600627-2600709:-1:exon

position:2600627:-1
position: 2600627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2600709:-1
position: 2600709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2600424-2600490:-1:exon

position:2600424:-1
position: 2600424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2600490:-1
position: 2600490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2600092-2600220:-1:exon

position:2600092:-1
position: 2600092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2600220:-1
position: 2600220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2599898-2600007:-1:exon

position:2599898:-1
position: 2599898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2600007:-1
position: 2600007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2598653-2599245:-1:exon

position:2599245:-1
position: 2599245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057921
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar-sorting receptor 3
translation: MGRSDGLVPGFLLAVWGLGLVFLALPVAGRFVVEKNSLMVTSPSELRGKHDSAIGNFGIPQYGGSMAGTVVYPKTNKYVCEEFSDSDLFKPKPGALPNFLLVDRGECLFAKKVWNAQNAGASAVLVIDDKDEPLITMDLPREDDKAAKYIQNITIPSALIDKKFGEKLKKAVLSGEMVNVNLDWREAVPHPDDRVEYELWTNSNDECGPKCNMLMDFLKEFKGAAQLLEKGGYSQFTPHYITWYCPQAFIVSKQCKSQCINHGRYCAPDPEQDFSTGYEGKDVVVENLRQLCVFKVASENKRPWVWWDYVTDFHIRCPMKEKKYNKECADTVIKSLGLDVKKIEKCMGDTNADSDHAILKMEQDAQVGKGSRGDVTILPTLIVNNRQYRGKLEKKAVLKAICAGFEETTEPAACLSDDIETNECLDNNGGCWQDKASNITACKDTFRGRVCECPVVDGVHFKGDGYSHCEAIGPGRCRINNGGCWQVTRGGTTFSACQDTGDNKCVCPSGFKGDGIKTCEDIDECKEKTACQCPECSCKDTWGSYECTCSRDLLYIREHDICISKSASEAKATWTAVWVILVVLIFAAFGAYIVYKYRLRSYMDSEIRAIMAQYMPLDSQGEVPNHAHEENHA
SIO_010081: LOC105057921
subclass of: SO_0000673
so part of: LOC105057921
location: complement(join(2599144..2599245,2599898..2600007,2600092..2600220,2600424..2600490,2600627..2600709,2605884..2605965,2606040..2606116,2606224..2606307,2606375..2606444,2606600..2606688,2606972..2607664,2614176..2614491))
location: region:2599144-2614491:-1
so has part: feature:2614176-2614491:-1:exon
so has part: feature:2606972-2607664:-1:exon
so has part: feature:2606600-2606688:-1:exon
so has part: feature:2606375-2606444:-1:exon
so has part: feature:2606224-2606307:-1:exon
so has part: feature:2606040-2606116:-1:exon
so has part: feature:2605884-2605965:-1:exon
so has part: feature:2600627-2600709:-1:exon
so has part: feature:2600424-2600490:-1:exon
so has part: feature:2600092-2600220:-1:exon
so has part: feature:2599898-2600007:-1:exon
so has part: feature:2599144-2599245:-1:exon

XP_010938945.1
type: Protein
SIO_000068: ncbiprotein

position:2599144:-1
position: 2599144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2614491:-1
position: 2614491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2614176-2614491:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2606972-2607664:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2606600-2606688:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2606375-2606444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2606224-2606307:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2606040-2606116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2605884-2605965:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2600627-2600709:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2600424-2600490:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2600092-2600220:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2599898-2600007:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2599144-2599245:-1:exon

LOC105057922
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2620841..2623704)
location: region:2620841-2623704:-1
so has part: feature:2620841-2623704:-1:exon
subclass of: SO_0000010

105057922
type: Gene
SIO_000068: ncbigene

position:2620841:-1
position: 2620841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2623704:-1
position: 2623704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2620841-2623704:-1:exon

LOC105057922
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057922
product: pentatricopeptide repeat-containing protein At1g25360
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940644.2
SIO_010081: LOC105057922
subclass of: SO_0000673
so part of: LOC105057922
location: complement(2620841..2623704)
location: region:2620841-2623704:-1
so has part: feature:2620841-2623704:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2620841-2623704:-1:exon

LOC105057922
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At1g25360
translation: MPPSSPSAPLLSLQPFDVHKLANRFATHLQLLAAALPKAAAVDAIHPLLLRLRAFHAHILAFGFKPRAHILNRLVDIYAKAGDLPSARHLFDAAPAEAAAATSLVNAYAAAGCLPLARRLFDCIPLPARDTVFYNAMISSYARAGDGLPALAIFRDMLRDDFRPDDYTFTGVLSAAAAIIGLELDHCWQLHCTVVKSGTEHVIPVSNALIALYFRCDSPVTAVIAREVFDRMVERDELTWTTTVVGYVRQGDINEARQVFDKMEGRFDVVWNAMISGYVHCGLFLEALNMFRRMNSIGIPLDEFTYTSVLSACVNAGLFNHGKAVHAHIIRSGPDFNPESALPVENVLVTLYSKFGKINAAKRIFDDIKGKDPVSWNAILTGYLNCGRIDVALAIFQAMPHKNELAWMVMISGFVHNGLAEEGLKLFSQMRAAGTKPCDYTYASTVAACGDIGALEHGRQLHAQLMQFGYESSNSAGNALLTMYAKCGALEEAHLMFLLMPNVDAVSWNAMVAALGHHGHGREAIELFDRMIGEGIFPDRISFLSVLSACNHAGLVDEGFRYFESMKRDYGISPGEDHYARLIDLLGRAGRIGEARDVVESMPFEAGPCIWEVVLSGCRMHGDMDLGIYAAEQLFKMIPQHDGTYVLLSNIYAAVGRWDDVLRVRKLMKDRGVKKEPGCSWIEVANKVHVFLVNDARHPEVEEVYRFLEILGVKMRKLGYVPDTKFVLQDVDPDKKEYALSTHSEKLAVGYGLMKLPAGATVRVLKNLRICGDCHAAIMFMSKAADREIIVRDVKRFHHFKNGECSCGNYW
SIO_010081: LOC105057922
subclass of: SO_0000673
so part of: LOC105057922
location: complement(2621224..2623659)
location: region:2621224-2623659:-1
so has part: feature:2621224-2623659:-1:exon

XP_010938946.1
type: Protein
SIO_000068: ncbiprotein

position:2621224:-1
position: 2621224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2623659:-1
position: 2623659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2621224-2623659:-1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 2631728..2631799
location: region:2631728-2631799:1
so has part: feature:2631728-2631799:1:exon
subclass of: SO_0000663

109506679
type: Gene
SIO_000068: ncbigene

position:2631728:1
position: 2631728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2631799:1
position: 2631799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2631728-2631799:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 51953
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:2631760..2631762,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 2631728..2631799
location: region:2631728-2631799:1
so has part: feature:2631728-2631799:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2631728-2631799:1:exon

LOC105057923
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057923
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2662147..2670801
location: region:2662147-2670801:1
so has part: feature:2662147-2670801:1:exon
subclass of: SO_0000010

105057923
type: Gene
SIO_000068: ncbigene

position:2662147:1
position: 2662147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2670801:1
position: 2670801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2662147-2670801:1:exon

LOC105057923
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057923
product: activating signal cointegrator 1 complex subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_010940645.3
SIO_010081: LOC105057923
subclass of: SO_0000673
so part of: LOC105057923
location: join(2662147..2662614,2662805..2662964,2663157..2663218,2663335..2663429,2664151..2664264,2667132..2667197,2667294..2667391,2667510..2667946,2669399..2670801)
location: region:2662147-2670801:1
so has part: feature:2662147-2662614:1:exon
so has part: feature:2662805-2662964:1:exon
so has part: feature:2663157-2663218:1:exon
so has part: feature:2663335-2663429:1:exon
so has part: feature:2664151-2664264:1:exon
so has part: feature:2667132-2667197:1:exon
so has part: feature:2667294-2667391:1:exon
so has part: feature:2667510-2667946:1:exon
so has part: feature:2669399-2670801:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2662147-2662614:1:exon

position:2662614:1
position: 2662614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2662805-2662964:1:exon

position:2662805:1
position: 2662805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2662964:1
position: 2662964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2663157-2663218:1:exon

position:2663157:1
position: 2663157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2663218:1
position: 2663218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2663335-2663429:1:exon

position:2663335:1
position: 2663335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2663429:1
position: 2663429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2664151-2664264:1:exon

position:2664151:1
position: 2664151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2664264:1
position: 2664264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2667132-2667197:1:exon

position:2667132:1
position: 2667132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2667197:1
position: 2667197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2667294-2667391:1:exon

position:2667294:1
position: 2667294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2667391:1
position: 2667391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2667510-2667946:1:exon

position:2667510:1
position: 2667510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2667946:1
position: 2667946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2669399-2670801:1:exon

position:2669399:1
position: 2669399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057923
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057923
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activating signal cointegrator 1 complex subunit 2
translation: MPWQPDSLRLPFLLSLRRRNSEEAMASAPSKRFHGPKGSYRNQKRFVPKGENSSFSRDHPIPGNAKPPPPLTTALRESSTAPARPGGKGRRGGGGNFVRYLPQDEAVACGLGADAGGLDAVESQGIVDLLNDELSKLLKMSSRDFWQEVATNDSLHEFLDSYLQFRHRWYDFPHRGARGTVAGVIVGELELCRRVFMVLYRISSNKDPGARANECLSMKEHTALLQEKKLLDLPKLLDICAIYGYDNEELTRLLVTNAIKAQPKLLDNISSVVTHFLNIVHTMHQRCSSSIEVLIASGGCEVHGYSQLYKDFSEVVDFINDAIVTLDAFADAYKPASLYFSIPFEMSYGNEELLSTLAKLHDSLLLSIEQGFKLVSSYVADGKQNLSAGLLEDVVLSLKMLSVRVVKFGGKLLDFCYLNDQLTDDSLLQTATKMFPAKVEDPAIRGDILVQTFKEINGEVSNPYGKYRSGTFLQNIEKDFKILGQIQGLRNNGWIFMDDEQFQYLSQIAAPATMVSWNKEPEIPIPISSLNDKAQMDEEAVILDSKISQIKDLFPDYGKGFLSACLEAYNHDPEEVIQRILEGTLHEDLLSLDTSLEQILPPKSATQNKSDKGKGVLLESASCNSVLPAKVDSKMPGKDKDGPSSSVSSYGRYTRKSNNNLPDSAVLDSTAKDAVRSAVLAAEYEYEDEYDDSFDDLVLNVVEAGYEEADNSSNRISSLSERSSGSDIETSSRNSTSKWSSQKKPQFYVKDGKNYSYKVSGSVGVSNAQEAAVLAQAQKEIIHGLGRGGNLPVGAVKKLMDAEEQDHSVSDAAESSGRGNPNPRGRGGRRGGGNHHRKDRAMKKHFTGLVGH
SIO_010081: LOC105057923
subclass of: SO_0000673
so part of: LOC105057923
location: join(2662170..2662614,2662805..2662964,2663157..2663218,2663335..2663429,2664151..2664264,2667132..2667197,2667294..2667391,2667510..2667946,2669399..2670480)
location: region:2662170-2670480:1
so has part: feature:2662170-2662614:1:exon
so has part: feature:2662805-2662964:1:exon
so has part: feature:2663157-2663218:1:exon
so has part: feature:2663335-2663429:1:exon
so has part: feature:2664151-2664264:1:exon
so has part: feature:2667132-2667197:1:exon
so has part: feature:2667294-2667391:1:exon
so has part: feature:2667510-2667946:1:exon
so has part: feature:2669399-2670480:1:exon

XP_010938947.1
type: Protein
SIO_000068: ncbiprotein

position:2662170:1
position: 2662170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2670480:1
position: 2670480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2662170-2662614:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2662805-2662964:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2663157-2663218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2663335-2663429:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2664151-2664264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2667132-2667197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2667294-2667391:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2667510-2667946:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2669399-2670480:1:exon

LOC105057924
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057924
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2677420..2686859
location: region:2677420-2686859:1
so has part: feature:2677420-2686859:1:exon
subclass of: SO_0000010

105057924
type: Gene
SIO_000068: ncbigene

position:2677420:1
position: 2677420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2686859:1
position: 2686859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2677420-2686859:1:exon

LOC105057924
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057924
product: syntaxin-61
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_010940647.3
SIO_010081: LOC105057924
subclass of: SO_0000673
so part of: LOC105057924
location: join(2677420..2677750,2678759..2678832,2680303..2680416,2680709..2680822,2681069..2681268,2681892..2681982,2686088..2686153,2686619..2686859)
location: region:2677420-2686859:1
so has part: feature:2677420-2677750:1:exon
so has part: feature:2678759-2678832:1:exon
so has part: feature:2680303-2680416:1:exon
so has part: feature:2680709-2680822:1:exon
so has part: feature:2681069-2681268:1:exon
so has part: feature:2681892-2681982:1:exon
so has part: feature:2686088-2686153:1:exon
so has part: feature:2686619-2686859:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2677420-2677750:1:exon

position:2677750:1
position: 2677750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2678759-2678832:1:exon

position:2678759:1
position: 2678759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2678832:1
position: 2678832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2680303-2680416:1:exon

position:2680303:1
position: 2680303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2680416:1
position: 2680416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2680709-2680822:1:exon

position:2680709:1
position: 2680709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2680822:1
position: 2680822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2681069-2681268:1:exon

position:2681069:1
position: 2681069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2681268:1
position: 2681268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2681892-2681982:1:exon

position:2681892:1
position: 2681892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2681982:1
position: 2681982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2686088-2686153:1:exon

position:2686088:1
position: 2686088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2686153:1
position: 2686153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2686619-2686859:1:exon

position:2686619:1
position: 2686619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057924
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057924
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-61
translation: MTSAQDPFYIVKDEIQESIDKLHDSFHRWEETPANSGDHLLLTKQLLANCESIKWQVDELDKAIAVAARDPAWYGLNEVELEKRRRWTNIAHKQVDSVRKAVEDGRKKSNSVNLGPSGMHRELMRLPIDHASQAGRSNNYAAEDNDDFISAESDRQMLLIKQQDQELDDLSISVQRIGDVGLTINEELIGQERILDDVSMEVETTSNRLGFVQKKVAMVMKKAGAKGQIMMILFLIVLFIVLFVLVFFT
SIO_010081: LOC105057924
subclass of: SO_0000673
so part of: LOC105057924
location: join(2678779..2678832,2680303..2680416,2680709..2680822,2681069..2681268,2681892..2681982,2686088..2686153,2686619..2686729)
location: region:2678779-2686729:1
so has part: feature:2678779-2678832:1:exon
so has part: feature:2680303-2680416:1:exon
so has part: feature:2680709-2680822:1:exon
so has part: feature:2681069-2681268:1:exon
so has part: feature:2681892-2681982:1:exon
so has part: feature:2686088-2686153:1:exon
so has part: feature:2686619-2686729:1:exon

XP_010938949.1
type: Protein
SIO_000068: ncbiprotein

position:2678779:1
position: 2678779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2686729:1
position: 2686729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2678779-2678832:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2680303-2680416:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2680709-2680822:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2681069-2681268:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2681892-2681982:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2686088-2686153:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2686619-2686729:1:exon

LOC105057925
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2697539..2710191)
location: region:2697539-2710191:-1
so has part: feature:2697539-2710191:-1:exon
subclass of: SO_0000010

105057925
type: Gene
SIO_000068: ncbigene

position:2697539:-1
position: 2697539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2710191:-1
position: 2710191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2697539-2710191:-1:exon

LOC105057925
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057925
product: formin-like protein 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_010940648.3
SIO_010081: LOC105057925
subclass of: SO_0000673
so part of: LOC105057925
location: complement(join(2697539..2698694,2699167..2699408,2708612..2708811,2708921..2710191))
location: region:2697539-2710191:-1
so has part: feature:2708921-2710191:-1:exon
so has part: feature:2708612-2708811:-1:exon
so has part: feature:2699167-2699408:-1:exon
so has part: feature:2697539-2698694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2708921-2710191:-1:exon

position:2708921:-1
position: 2708921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2708612-2708811:-1:exon

position:2708612:-1
position: 2708612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2708811:-1
position: 2708811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2699167-2699408:-1:exon

position:2699167:-1
position: 2699167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2699408:-1
position: 2699408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2697539-2698694:-1:exon

position:2698694:-1
position: 2698694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: formin-like protein 8
translation: MRRNPLILFLVSLSFLFSAVGSLSDGHGSRRDLHQPLFPIQWVPPPPPLDSSDPPPAPAGQTPTAANVSAASSPSNSRSTTTKNIAIGVSISVAALAILFFCGFLLYRHRIRSPPDSAQLVASEDGSNWRFRTPGRPAATSGSEVLYLGTMEPASGRVSGELFSSPHRKLSSECVVEVHHPSPELRPLTSLTPRPPLQRGVVPPPEAASDDETFYTPHRSLASMTIGSSSPTVSRQSIPSVGSAGKEVLALTEDAAPPWSQRSSPRRQLSNGLASDKLMVPPITQQPPPPPPTPPPPPPPPPPPKTERMVGMRPSQPPPPPPLDVAGKKKPPSGAPAAPMPAELSQRRRLLRPLPPEGAPINIPIPISKFSKGDDCSSSQPVDRTGDDLEGDAKPKLKPLHWDQVMASSDRPMVWDQLKSSSFQLNEDMMEALFVHNATNLVPKDSNRRPVLPPFKQENRVLDPKKAQNIAILLRALNVTQDEVSDALLDGNPECLGANLLETLVKMTPSKEEELKLRDYNGDISKLGSAERFLKAVLDIPFAFKRVDAMLYRANFETEVNYLRKSFETLEAACEDLRSSRLFLKLLEAVLRTGNRMNVGTNRGEAKAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGSGSEPTAADLPNNAREKQFKKQGLKVVAGLSNELGNVKKAAGMDSEVLRSYVSKLELGLEKIRSVLQLERSCTQGKKFFEAMKVFLKEAEGELERVKAEEKQALGLVKEITEYFHGDAAKEEAHPLRIFMVVRDFLSILDNVCKDVGRTHERTMMGTARSFLISASASLPVLHRHDAWRDGNADDDGPRS
SIO_010081: LOC105057925
subclass of: SO_0000673
so part of: LOC105057925
location: complement(join(2697909..2698694,2699167..2699408,2708612..2708811,2708921..2710191))
location: region:2697909-2710191:-1
so has part: feature:2708921-2710191:-1:exon
so has part: feature:2708612-2708811:-1:exon
so has part: feature:2699167-2699408:-1:exon
so has part: feature:2697909-2698694:-1:exon

XP_010938950.1
type: Protein
SIO_000068: ncbiprotein

position:2697909:-1
position: 2697909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2708921-2710191:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2708612-2708811:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2699167-2699408:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2697909-2698694:-1:exon

LOC105057926
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2734032..2734874)
location: region:2734032-2734874:-1
so has part: feature:2734032-2734874:-1:exon
subclass of: SO_0000010

105057926
type: Gene
SIO_000068: ncbigene

position:2734032:-1
position: 2734032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2734874:-1
position: 2734874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2734032-2734874:-1:exon

LOC105057926
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057926
product: uncharacterized LOC105057926
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940649.3
SIO_010081: LOC105057926
subclass of: SO_0000673
so part of: LOC105057926
location: complement(2734032..2734874)
location: region:2734032-2734874:-1
so has part: feature:2734032-2734874:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2734032-2734874:-1:exon

LOC105057926
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057926
translation: MASQTIESYREAAEVYHGDDLCKKKSIELLEELGLPKGLLPLVDIEEFGYNRAAGFLWLIQKKKKEHTFKKIKQTVSYATEVTAFVEQRKMKKITGVKTKELLLWLSVVEVYIDDPSLEKITFKTGTGLSDTFPVAAFELE
SIO_010081: LOC105057926
subclass of: SO_0000673
so part of: LOC105057926
location: complement(2734364..2734789)
location: region:2734364-2734789:-1
so has part: feature:2734364-2734789:-1:exon

XP_010938951.1
type: Protein
SIO_000068: ncbiprotein

position:2734364:-1
position: 2734364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2734789:-1
position: 2734789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2734364-2734789:-1:exon

LOC105057984
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057984
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2764237..>2764940)
location: region:2764237-2764940:-1
so has part: feature:2764237-2764940:-1:exon
subclass of: SO_0000010

105057984
type: Gene
SIO_000068: ncbigene

position:2764237:-1
position: 2764237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2764940:-1
position: 2764940
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2764237-2764940:-1:exon

LOC105057984
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057984
product: uncharacterized LOC105057984
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019855087.2
SIO_010081: LOC105057984
subclass of: SO_0000673
so part of: LOC105057984
location: complement(2764237..>2764940)
location: region:2764237-2764940:-1
so has part: feature:2764237-2764940:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2764237-2764940:-1:exon

LOC105057984
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057984
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057984
translation: NFHKLPFLSLLTIRWSYREGAEVYRGDDICKKKSIQLLEELSLPKDLLPLVDIEEFGYNRAAGFMWLIQKKKKEHTFKKIKQTVSYATEVTAFVEHHKMKKITGVKTKELLLWLSVVEVYIDDPSSEKITFKTGTGLSDSFPVSAFELE
SIO_010081: LOC105057984
subclass of: SO_0000673
so part of: LOC105057984
location: complement(2764491..>2764940)
location: region:2764491-2764940:-1
so has part: feature:2764491-2764940:-1:exon

XP_019710646.1
type: Protein
SIO_000068: ncbiprotein

position:2764491:-1
position: 2764491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2764491-2764940:-1:exon

LOC105057927
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057927
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2812241..2813351
location: region:2812241-2813351:1
so has part: feature:2812241-2813351:1:exon
subclass of: SO_0000010

105057927
type: Gene
SIO_000068: ncbigene

position:2812241:1
position: 2812241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2813351:1
position: 2813351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2812241-2813351:1:exon

LOC105057927
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057927
product: NADPH-dependent aldehyde reductase-like protein, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940650.3
SIO_010081: LOC105057927
subclass of: SO_0000673
so part of: LOC105057927
location: 2812241..2813351
location: region:2812241-2813351:1
so has part: feature:2812241-2813351:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2812241-2813351:1:exon

LOC105057927
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057927
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADPH-dependent aldehyde reductase-like protein, chloroplastic
translation: MAAVRSPITTLPLAGRVAIVTGASRGIGRAIAVHLASLGARLVLNYSSSSSQADLLATELNSSSPSSYPCAVAVRANVSDQADVKSLFDRAESFFGTQAHILVANAGLLDSKYPSLVDTTVEDWDSTFAVNARGAFFCCREAANRLQRGGGGRIVTVSSSLVGALRPGYGAYTASKAAVEAMTRILAKELRGTGITANCVAPGPVATELFFAGKSEEVVRQAAELSPLGRLGQPEDVAGLVGFLCTDAGEWVDGQVVRANGGFI
SIO_010081: LOC105057927
subclass of: SO_0000673
so part of: LOC105057927
location: 2812299..2813093
location: region:2812299-2813093:1
so has part: feature:2812299-2813093:1:exon

XP_010938952.1
type: Protein
SIO_000068: ncbiprotein

position:2812299:1
position: 2812299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2813093:1
position: 2813093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2812299-2813093:1:exon

LOC105057928
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2885741..2886473)
location: region:2885741-2886473:-1
so has part: feature:2885741-2886473:-1:exon
subclass of: SO_0000010

105057928
type: Gene
SIO_000068: ncbigene

position:2885741:-1
position: 2885741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2886473:-1
position: 2886473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2885741-2886473:-1:exon

LOC105057928
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057928
product: uncharacterized LOC105057928
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940651.3
SIO_010081: LOC105057928
subclass of: SO_0000673
so part of: LOC105057928
location: complement(2885741..2886473)
location: region:2885741-2886473:-1
so has part: feature:2885741-2886473:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2885741-2886473:-1:exon

LOC105057928
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057928
translation: MASQTIESYREGAEVYHGDDLCKKKSIQLLQELGLPKGLLPLVDIEEFGYNRAAGFIWLIQKKKKEHTFKKIKQTVSYATEVMAFVEQCKMKKIMGVKTKELLLWLSVVEVYVDDPSSEKITFKTGTGLSDSFPTFAFELE
SIO_010081: LOC105057928
subclass of: SO_0000673
so part of: LOC105057928
location: complement(2885974..2886399)
location: region:2885974-2886399:-1
so has part: feature:2885974-2886399:-1:exon

XP_010938953.1
type: Protein
SIO_000068: ncbiprotein

position:2885974:-1
position: 2885974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2886399:-1
position: 2886399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2885974-2886399:-1:exon

LOC105057929
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2901248..2904755)
location: region:2901248-2904755:-1
so has part: feature:2901248-2904755:-1:exon
subclass of: SO_0000010

105057929
type: Gene
SIO_000068: ncbigene

position:2901248:-1
position: 2901248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2904755:-1
position: 2904755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2901248-2904755:-1:exon

LOC105057929
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057929
product: BTB/POZ and TAZ domain-containing protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029268344.1
SIO_010081: LOC105057929
subclass of: SO_0000673
so part of: LOC105057929
location: complement(join(2901248..2901534,2901635..2901948,2902429..2902735,2902843..2902976,2903118..2903370,2904316..2904755))
location: region:2901248-2904755:-1
so has part: feature:2904316-2904755:-1:exon
so has part: feature:2903118-2903370:-1:exon
so has part: feature:2902843-2902976:-1:exon
so has part: feature:2902429-2902735:-1:exon
so has part: feature:2901635-2901948:-1:exon
so has part: feature:2901248-2901534:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2904316-2904755:-1:exon

position:2904316:-1
position: 2904316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2903118-2903370:-1:exon

position:2903118:-1
position: 2903118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2903370:-1
position: 2903370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2902843-2902976:-1:exon

position:2902843:-1
position: 2902843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2902976:-1
position: 2902976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2902429-2902735:-1:exon

position:2902429:-1
position: 2902429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2902735:-1
position: 2902735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2901635-2901948:-1:exon

position:2901635:-1
position: 2901635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2901948:-1
position: 2901948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2901248-2901534:-1:exon

position:2901534:-1
position: 2901534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057929
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057929
product: BTB/POZ and TAZ domain-containing protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_010940652.3
SIO_010081: LOC105057929
subclass of: SO_0000673
so part of: LOC105057929
location: complement(join(2901248..2901534,2901635..2901948,2902429..2902735,2902843..2902976,2903118..2903370,2904059..2904749))
location: region:2901248-2904749:-1
so has part: feature:2904059-2904749:-1:exon
so has part: feature:2903118-2903370:-1:exon
so has part: feature:2902843-2902976:-1:exon
so has part: feature:2902429-2902735:-1:exon
so has part: feature:2901635-2901948:-1:exon
so has part: feature:2901248-2901534:-1:exon

position:2904749:-1
position: 2904749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2904059-2904749:-1:exon

position:2904059:-1
position: 2904059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2903118-2903370:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2902843-2902976:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2902429-2902735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2901635-2901948:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2901248-2901534:-1:exon

LOC105057929
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ and TAZ domain-containing protein 4
translation: MAQQRMGNINGQGCTPQAPPFPGLMTNCKTCKHSAARGCCTVMDATRDLWDKLFAEGYQADVFVDTNEGMIPAHSSVLGMASPVMKNMLRQSRSRGGCRKAISIRGVPHHAVRVFLRFLYSSCYEQEEMNQFVLHLVVLSHVFVIPTLKNVCVQQLERGLLTTENVVDVFQLAKLFDAPRLCLLCHRMIVKNFKVVSATEGWKVMKQSNPRLEKELLESVIDADTRKNERLKKLEERKIYLQLHQAMEALVHICRDGCRTIGPHDKVLKRSAAPCNFPACKGLEALVRHFAGCKNRVLGGCTHCKRMWQLLELHSRLCMQVNGCKVPLCRHFKEKLRHQNKKDEVKWKLLVSKVLEARSFSGAHLLQSMVAVRA
SIO_010081: LOC105057929
subclass of: SO_0000673
so part of: LOC105057929
location: complement(join(2901399..2901534,2901635..2901948,2902429..2902735,2902843..2902976,2903118..2903351))
location: region:2901399-2903351:-1
so has part: feature:2903118-2903351:-1:exon
so has part: feature:2902843-2902976:-1:exon
so has part: feature:2902429-2902735:-1:exon
so has part: feature:2901635-2901948:-1:exon
so has part: feature:2901399-2901534:-1:exon

XP_029124177.1
type: Protein
SIO_000068: ncbiprotein

position:2901399:-1
position: 2901399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2903351:-1
position: 2903351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2903118-2903351:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2902843-2902976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2902429-2902735:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2901635-2901948:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2901399-2901534:-1:exon

LOC105057929
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ and TAZ domain-containing protein 4
translation: MAQQRMGNINGQGCTPQAPPFPGLMTNCKTCKHSAARGCCTVMDATRDLWDKLFAEGYQADVFVDTNEGMIPAHSSVLGMASPVMKNMLRQSRSRGGCRKAISIRGVPHHAVRVFLRFLYSSCYEQEEMNQFVLHLVVLSHVFVIPTLKNVCVQQLERGLLTTENVVDVFQLAKLFDAPRLCLLCHRMIVKNFKVVSATEGWKVMKQSNPRLEKELLESVIDADTRKNERLKKLEERKIYLQLHQAMEALVHICRDGCRTIGPHDKVLKRSAAPCNFPACKGLEALVRHFAGCKNRVLGGCTHCKRMWQLLELHSRLCMQVNGCKVPLCRHFKEKLRHQNKKDEVKWKLLVSKVLEARSFSGAHLLQSMVAVRA
SIO_010081: LOC105057929
subclass of: SO_0000673
so part of: LOC105057929
location: complement(join(2901399..2901534,2901635..2901948,2902429..2902735,2902843..2902976,2903118..2903351))
location: region:2901399-2903351:-1
so has part: feature:2903118-2903351:-1:exon
so has part: feature:2902843-2902976:-1:exon
so has part: feature:2902429-2902735:-1:exon
so has part: feature:2901635-2901948:-1:exon
so has part: feature:2901399-2901534:-1:exon

XP_010938954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2903118-2903351:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2902843-2902976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2902429-2902735:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2901635-2901948:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2901399-2901534:-1:exon

LOC105057930
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057930
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2907294..2915664)
location: region:2907294-2915664:-1
so has part: feature:2907294-2915664:-1:exon
subclass of: SO_0000010

105057930
type: Gene
SIO_000068: ncbigene

position:2907294:-1
position: 2907294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2915664:-1
position: 2915664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2907294-2915664:-1:exon

LOC105057930
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057930
product: interferon-related developmental regulator 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_010940653.3
SIO_010081: LOC105057930
subclass of: SO_0000673
so part of: LOC105057930
location: complement(join(2907294..2907686,2908039..2908107,2909406..2909477,2909582..2909632,2909754..2909837,2909921..2910236,2910333..2910445,2910573..2910683,2910792..2910904,2910987..2911069,2911904..2911984,2914923..2915088,2915331..2915664))
location: region:2907294-2915664:-1
so has part: feature:2915331-2915664:-1:exon
so has part: feature:2914923-2915088:-1:exon
so has part: feature:2911904-2911984:-1:exon
so has part: feature:2910987-2911069:-1:exon
so has part: feature:2910792-2910904:-1:exon
so has part: feature:2910573-2910683:-1:exon
so has part: feature:2910333-2910445:-1:exon
so has part: feature:2909921-2910236:-1:exon
so has part: feature:2909754-2909837:-1:exon
so has part: feature:2909582-2909632:-1:exon
so has part: feature:2909406-2909477:-1:exon
so has part: feature:2908039-2908107:-1:exon
so has part: feature:2907294-2907686:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2915331-2915664:-1:exon

position:2915331:-1
position: 2915331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2914923-2915088:-1:exon

position:2914923:-1
position: 2914923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2915088:-1
position: 2915088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2911904-2911984:-1:exon

position:2911904:-1
position: 2911904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2911984:-1
position: 2911984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2910987-2911069:-1:exon

position:2910987:-1
position: 2910987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2911069:-1
position: 2911069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2910792-2910904:-1:exon

position:2910792:-1
position: 2910792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2910904:-1
position: 2910904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2910573-2910683:-1:exon

position:2910573:-1
position: 2910573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2910683:-1
position: 2910683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2910333-2910445:-1:exon

position:2910333:-1
position: 2910333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2910445:-1
position: 2910445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2909921-2910236:-1:exon

position:2909921:-1
position: 2909921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2910236:-1
position: 2910236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2909754-2909837:-1:exon

position:2909754:-1
position: 2909754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2909837:-1
position: 2909837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2909582-2909632:-1:exon

position:2909582:-1
position: 2909582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2909632:-1
position: 2909632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2909406-2909477:-1:exon

position:2909406:-1
position: 2909406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2909477:-1
position: 2909477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2908039-2908107:-1:exon

position:2908039:-1
position: 2908039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2908107:-1
position: 2908107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2907294-2907686:-1:exon

position:2907686:-1
position: 2907686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057930
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-related developmental regulator 2
translation: MGKSNRRKAGADQFDSSDADSVSSASTALSELTPANETEHVNSLEFGLDKFIDALYEKRGSTRETALLGLLDAFESHVLHTFVENKCITLLHQYINSIKRGSTKEISLACRAIGLLAITAGAGSSAHEIMEESVPQLSRALKCGSDACKISVLECLAVISFVGANDFAETETSLKIMWEVIHPKSVSNGGPSKRPSSAVLAAAISAWSFLLTTISSWRINPDTWKESISFLSTLLEVDERYDRSVRIAAGEAIALFFELGILGMSYSEENGVENFNNEVSKRCTVTYMQSMKAKISGQVYDLSMEAGGKGADKKNLNGQRDLFQKIWDFVQMGECPEVLLKISSKRNILRTSTWSQLIQLNFLKRYLGRGFLKHAQENELLHDVFEYTVDKTESLSAKEKKISRSGDEKGRTQKLNKDRRMAQARKQGHLIAQDE
SIO_010081: LOC105057930
subclass of: SO_0000673
so part of: LOC105057930
location: complement(join(2907648..2907686,2908039..2908107,2909406..2909477,2909582..2909632,2909754..2909837,2909921..2910236,2910333..2910445,2910573..2910683,2910792..2910904,2910987..2911069,2911904..2911984,2914923..2915088,2915331..2915340))
location: region:2907648-2915340:-1
so has part: feature:2915331-2915340:-1:exon
so has part: feature:2914923-2915088:-1:exon
so has part: feature:2911904-2911984:-1:exon
so has part: feature:2910987-2911069:-1:exon
so has part: feature:2910792-2910904:-1:exon
so has part: feature:2910573-2910683:-1:exon
so has part: feature:2910333-2910445:-1:exon
so has part: feature:2909921-2910236:-1:exon
so has part: feature:2909754-2909837:-1:exon
so has part: feature:2909582-2909632:-1:exon
so has part: feature:2909406-2909477:-1:exon
so has part: feature:2908039-2908107:-1:exon
so has part: feature:2907648-2907686:-1:exon

XP_010938955.1
type: Protein
SIO_000068: ncbiprotein

position:2907648:-1
position: 2907648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2915340:-1
position: 2915340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2915331-2915340:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2914923-2915088:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2911904-2911984:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2910987-2911069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2910792-2910904:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2910573-2910683:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2910333-2910445:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2909921-2910236:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2909754-2909837:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2909582-2909632:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2909406-2909477:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2908039-2908107:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2907648-2907686:-1:exon

LOC105057932
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057932
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2954900..2957204
location: region:2954900-2957204:1
so has part: feature:2954900-2957204:1:exon
subclass of: SO_0000010

105057932
type: Gene
SIO_000068: ncbigene

position:2954900:1
position: 2954900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2957204:1
position: 2957204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2954900-2957204:1:exon

LOC105057932
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057932
product: cyclin-D5-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940654.3
SIO_010081: LOC105057932
subclass of: SO_0000673
so part of: LOC105057932
location: join(2954900..2955446,2955526..2955615,2955707..2955998,2956088..2956221,2956331..2957204)
location: region:2954900-2957204:1
so has part: feature:2954900-2955446:1:exon
so has part: feature:2955526-2955615:1:exon
so has part: feature:2955707-2955998:1:exon
so has part: feature:2956088-2956221:1:exon
so has part: feature:2956331-2957204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2954900-2955446:1:exon

position:2955446:1
position: 2955446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2955526-2955615:1:exon

position:2955526:1
position: 2955526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2955615:1
position: 2955615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2955707-2955998:1:exon

position:2955707:1
position: 2955707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2955998:1
position: 2955998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2956088-2956221:1:exon

position:2956088:1
position: 2956088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2956221:1
position: 2956221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2956331-2957204:1:exon

position:2956331:1
position: 2956331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057932
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057932
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-D5-2
translation: MEDSGCSVSLSNLICQEDGSTLLLGDDDEEEKSDMVTVYNNGSIFSETEEDDYIDMLVSKETACFESRTYDDSSEDWLKCARSDAVRWILKTKGYFGFCSKTAYMAVTYLDRFLMHRRIDDERKIWAVQLLSVACLSLAAKMEECKVPALSEFGLEEYDFKSSVIQRMEFLVLNTLEWRLNSVTPFAFLSYFASKLQEHRWNDLMAKATGFIFAAATEVMNLGDYRPSVVAAAAILAAFDERLTQNLAEFKMRIISLRGSLETEHAFSCYRLMIQESHKEKVKPSKNLISWDLSTTNSSVDAIATTSFTARSSKRRRFESQHVE
SIO_010081: LOC105057932
subclass of: SO_0000673
so part of: LOC105057932
location: join(2955174..2955446,2955526..2955615,2955707..2955998,2956088..2956221,2956331..2956516)
location: region:2955174-2956516:1
so has part: feature:2955174-2955446:1:exon
so has part: feature:2955526-2955615:1:exon
so has part: feature:2955707-2955998:1:exon
so has part: feature:2956088-2956221:1:exon
so has part: feature:2956331-2956516:1:exon

XP_010938956.1
type: Protein
SIO_000068: ncbiprotein

position:2955174:1
position: 2955174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2956516:1
position: 2956516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2955174-2955446:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2955526-2955615:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2955707-2955998:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2956088-2956221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2956331-2956516:1:exon

LOC105057933
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057933
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2960315..2969310)
location: region:2960315-2969310:-1
so has part: feature:2960315-2969310:-1:exon
subclass of: SO_0000010

105057933
type: Gene
SIO_000068: ncbigene

position:2960315:-1
position: 2960315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2969310:-1
position: 2969310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2960315-2969310:-1:exon

LOC105057933
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057933
product: calcium-transporting ATPase 10, plasma membrane-type
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_010940655.3
SIO_010081: LOC105057933
subclass of: SO_0000673
so part of: LOC105057933
location: complement(join(2960315..2961016,2961536..2961834,2961920..2962091,2962556..2962714,2962805..2964756,2964863..2964917,2968639..2969310))
location: region:2960315-2969310:-1
so has part: feature:2968639-2969310:-1:exon
so has part: feature:2964863-2964917:-1:exon
so has part: feature:2962805-2964756:-1:exon
so has part: feature:2962556-2962714:-1:exon
so has part: feature:2961920-2962091:-1:exon
so has part: feature:2961536-2961834:-1:exon
so has part: feature:2960315-2961016:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2968639-2969310:-1:exon

position:2968639:-1
position: 2968639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2964863-2964917:-1:exon

position:2964863:-1
position: 2964863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2964917:-1
position: 2964917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2962805-2964756:-1:exon

position:2962805:-1
position: 2962805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2964756:-1
position: 2964756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2962556-2962714:-1:exon

position:2962556:-1
position: 2962556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2962714:-1
position: 2962714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2961920-2962091:-1:exon

position:2961920:-1
position: 2961920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2962091:-1
position: 2962091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2961536-2961834:-1:exon

position:2961536:-1
position: 2961536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2961834:-1
position: 2961834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2960315-2961016:-1:exon

position:2961016:-1
position: 2961016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057933
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057933
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-transporting ATPase 10, plasma membrane-type
translation: MESYLNRNFSGVKSKNSSAEALERWRKVCGVVKNPRRRFRFTANLWKRQEAAAMKRTNKEKLRVAVLVSKAALQFIQGVPLPSKYVVPKEVQAAGFQICADELGSIVEGHDVKKLKMHGGIDGIANKLCTSTTNGLVAAEDRLIRRQEIYGINKFTESPVRSFWVFVWEALQDMTLIILAVCAFVSLIVGIATEGWPKGAHDGLGIVASILLVVFVTAMSDYRQSLQFKDLDKEKKKISIQVTRDGFRQKMSIYDLLPGDIVHLAIGDQVPADGLFISGFSVLIDESSLTGESEPAIVNKENPFLLSGTKVQDGSCIMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLAEGLIRRKILDGSYLSWSGDDALELLEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVVKACVCGDIKEVSDPEKVSSMGSQLPDVVVKILLQSIFNNTGGEVVVNQDGKLEILGTPTESALLEFALSLGGDFQAVRQETKLVKVEPFNSTKKRMGVVLQLPEGRLRAHSKGASEIILAACDKVLDPAGNAVPLDEAAVRHLNDTIESFANEALRTLCLAYIDIENSFSAEDQIPIEGYTCIGIVGIKDPVRPGVKESVAICRSAGVTVRMVTGDNINTAKAIARECGILTDDGVAIEGPEFRKKSLEEMKDLIPKLQVMARSSPLDKHTLVKHLRTMFSEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRAPVGRNGSFISNVMWRNILGQAFYQFIIIWYLQTEGEGLFQLEGPDSDLTLNTLIFNSFVFCQVFNEISSREMEKINVFQGILENYVFVAVITITVIFQFVIVQFLGDFASTIPLTFSQWFFSVFIGFLGMPIAAAIKMIPVASR
SIO_010081: LOC105057933
subclass of: SO_0000673
so part of: LOC105057933
location: complement(join(2960768..2961016,2961536..2961834,2961920..2962091,2962556..2962714,2962805..2964756,2964863..2964917,2968639..2968815))
location: region:2960768-2968815:-1
so has part: feature:2968639-2968815:-1:exon
so has part: feature:2964863-2964917:-1:exon
so has part: feature:2962805-2964756:-1:exon
so has part: feature:2962556-2962714:-1:exon
so has part: feature:2961920-2962091:-1:exon
so has part: feature:2961536-2961834:-1:exon
so has part: feature:2960768-2961016:-1:exon

XP_010938957.1
type: Protein
SIO_000068: ncbiprotein

position:2960768:-1
position: 2960768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2968815:-1
position: 2968815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2968639-2968815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2964863-2964917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2962805-2964756:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2962556-2962714:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2961920-2962091:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2961536-2961834:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2960768-2961016:-1:exon

LOC109506650
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC109506650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<2974810..2975310)
location: region:2974810-2975310:-1
so has part: feature:2974810-2975310:-1:exon
subclass of: SO_0000010

109506650
type: Gene
SIO_000068: ncbigene

position:2974810:-1
position: 2974810
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:2975310:-1
position: 2975310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2974810-2975310:-1:exon

LOC109506650
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC109506650
product: uncharacterized LOC109506650
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_019855088.1
SIO_010081: LOC109506650
subclass of: SO_0000673
so part of: LOC109506650
location: complement(<2974810..2975310)
location: region:2974810-2975310:-1
so has part: feature:2974810-2975310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2974810-2975310:-1:exon

LOC109506650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC109506650
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(2974981..2974983),aa:OTHER)
transl except: (pos:complement(2974960..2974962),aa:OTHER)
product: LOW QUALITY PROTEIN: uncharacterized protein LOC109506650
translation: MSHGAIAHKSSNFTVIDYERDYFILAILHRSRQERWGRSRCGQRHDAATASSGEADVSLKKAVSVTSTAMSEKMILRRNPMGSEFIDPMLVGLMLDAFGLKPYEWDYESXLRNFQWXKEKYLLSMAVYYPYAVAEGGYVLDAKKMSMVTAGAAMARPTVCKECEGGR
SIO_010081: LOC109506650
subclass of: SO_0000673
so part of: LOC109506650
location: complement(<2974810..2975310)
location: region:2974810-2975310:-1
so has part: feature:2974810-2975310:-1:exon

XP_019710647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2974810-2975310:-1:exon

LOC105057934
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2998267..2999922
location: region:2998267-2999922:1
so has part: feature:2998267-2999922:1:exon
subclass of: SO_0000010

105057934
type: Gene
SIO_000068: ncbigene

position:2998267:1
position: 2998267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2999922:1
position: 2999922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2998267-2999922:1:exon

LOC105057934
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057934
product: probable strigolactone esterase DAD2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_010940656.3
SIO_010081: LOC105057934
subclass of: SO_0000673
so part of: LOC105057934
location: join(2998267..2999064,2999181..2999922)
location: region:2998267-2999922:1
so has part: feature:2998267-2999064:1:exon
so has part: feature:2999181-2999922:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2998267-2999064:1:exon

position:2999064:1
position: 2999064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2999181-2999922:1:exon

position:2999181:1
position: 2999181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057934
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable strigolactone esterase DAD2
translation: MGGSNSNWSSGGATGSKLLEMLNVRVVGNVDRPAPALVLSHGIGTDQSAWNRIVPYFERDYRIVLYDLVCAGSVNPDHFDFRRYVTLDAYVDDLLAILDALRIDRCFFVGHSVSAMIGILAAIRRPDAFLKLILIGASPRFLNDENYHGGFEEGEIETVFAAMESNYEAWVRGFAPLAVGADVPEAVREFSRTLFNMRPDITLFVSRTVFNSDLRGVLGLVRVPCVIVQTAKDVSVPPSVAGYLKAHLGGRTTTELLHHTEGHLPHLSAPAALAPVIRRSLSR
SIO_010081: LOC105057934
subclass of: SO_0000673
so part of: LOC105057934
location: join(2998646..2999064,2999181..2999613)
location: region:2998646-2999613:1
so has part: feature:2998646-2999064:1:exon
so has part: feature:2999181-2999613:1:exon

XP_010938958.1
type: Protein
SIO_000068: ncbiprotein

position:2998646:1
position: 2998646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2999613:1
position: 2999613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2998646-2999064:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2999181-2999613:1:exon

LOC105057935
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3120530..3122144)
location: region:3120530-3122144:-1
so has part: feature:3120530-3122144:-1:exon
subclass of: SO_0000010

105057935
type: Gene
SIO_000068: ncbigene

position:3120530:-1
position: 3120530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3122144:-1
position: 3122144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3120530-3122144:-1:exon

LOC105057935
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057935
product: U-box domain-containing protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_010940658.3
SIO_010081: LOC105057935
subclass of: SO_0000673
so part of: LOC105057935
location: complement(join(3120530..3120930,3121085..3122144))
location: region:3120530-3122144:-1
so has part: feature:3121085-3122144:-1:exon
so has part: feature:3120530-3120930:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3121085-3122144:-1:exon

position:3121085:-1
position: 3121085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3120530-3120930:-1:exon

position:3120930:-1
position: 3120930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U-box domain-containing protein 4
translation: METASLANYRYMGRSFSDGGDSSGAFSDCNSDRSGEFPSSAGSAPNGGAALHRLLMSCATDYSDEVVRGLISDLESPSAPVETQLHAAMMLRLLAKHNPENRLKIARAGAVRPLVALLSHPDPHLQEHGVTAILNLCLCDENKDPIAAAGAIRPLVRALRTGTPAARENAAIALLRLSDVEEHKIAIGRSGAIPHLVHLLETGGPRGKKDASTALYSLCTTRENKNRAVKEGVMRPLLELMADPESGMVDKAAYVLNSLVAVAEGRAAAVEEGGIPVLVEMVEVGTQRQKEIATLALRQICEESVAYRAMVSREGAIPPLVALSQSGTTRAKNKAEELIELLRQPRTAARGREAD
SIO_010081: LOC105057935
subclass of: SO_0000673
so part of: LOC105057935
location: complement(join(3120865..3120930,3121085..3122086))
location: region:3120865-3122086:-1
so has part: feature:3121085-3122086:-1:exon
so has part: feature:3120865-3120930:-1:exon

XP_010938960.1
type: Protein
SIO_000068: ncbiprotein

position:3120865:-1
position: 3120865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3122086:-1
position: 3122086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3121085-3122086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3120865-3120930:-1:exon

LOC105057985
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3131954..3132439
location: region:3131954-3132439:1
so has part: feature:3131954-3132439:1:exon

105057985
type: Gene
SIO_000068: ncbigene

position:3131954:1
position: 3131954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3132439:1
position: 3132439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3131954-3132439:1:exon

LOC105057985
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105057985
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105057985
subclass of: SO_0000673
so part of: LOC105057985
location: 3131954..3132439
location: region:3131954-3132439:1
so has part: feature:3131954-3132439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3131954-3132439:1:exon

LOC114914847
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC114914847
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3233257..3233363)
location: region:3233257-3233363:-1
so has part: feature:3233257-3233363:-1:exon
subclass of: SO_0000578

114914847
type: Gene
SIO_000068: ncbigene

position:3233257:-1
position: 3233257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3233363:-1
position: 3233363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3233257-3233363:-1:exon

LOC114914847
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51953
nc RNA class: snoRNA
gene: LOC114914847
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003802706.1
SIO_010081: LOC114914847
subclass of: SO_0000673
so part of: LOC114914847
location: complement(3233257..3233363)
location: region:3233257-3233363:-1
so has part: feature:3233257-3233363:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3233257-3233363:-1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(3244933..3245004)
location: region:3244933-3245004:-1
so has part: feature:3244933-3245004:-1:exon
subclass of: SO_0000663

109506686
type: Gene
SIO_000068: ncbigene

position:3244933:-1
position: 3244933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3245004:-1
position: 3245004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3244933-3245004:-1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 51953
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3244970..3244972),aa:Cys, seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: complement(3244933..3245004)
location: region:3244933-3245004:-1
so has part: feature:3244933-3245004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3244933-3245004:-1:exon

LOC105057937
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3272845..3284082
location: region:3272845-3284082:1
so has part: feature:3272845-3284082:1:exon
subclass of: SO_0000010

105057937
type: Gene
SIO_000068: ncbigene

position:3272845:1
position: 3272845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3284082:1
position: 3284082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3272845-3284082:1:exon

LOC105057937
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105057937
product: mitochondrial outer membrane protein porin 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_003802609.1
SIO_010081: LOC105057937
so part of: LOC105057937
location: join(3272845..3273106,3273218..3273285,3281679..3281789,3281879..3281965,3282045..3282253,3282369..3282607,3282976..3283148,3283468..3284082)
location: region:3272845-3284082:1
so has part: feature:3272845-3273106:1:exon
so has part: feature:3273218-3273285:1:exon
so has part: feature:3281679-3281789:1:exon
so has part: feature:3281879-3281965:1:exon
so has part: feature:3282045-3282253:1:exon
so has part: feature:3282369-3282607:1:exon
so has part: feature:3282976-3283148:1:exon
so has part: feature:3283468-3284082:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3272845-3273106:1:exon

position:3273106:1
position: 3273106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3273218-3273285:1:exon

position:3273218:1
position: 3273218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3273285:1
position: 3273285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3281679-3281789:1:exon

position:3281679:1
position: 3281679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3281789:1
position: 3281789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3281879-3281965:1:exon

position:3281879:1
position: 3281879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3281965:1
position: 3281965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3282045-3282253:1:exon

position:3282045:1
position: 3282045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3282253:1
position: 3282253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3282369-3282607:1:exon

position:3282369:1
position: 3282369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3282607:1
position: 3282607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3282976-3283148:1:exon

position:3282976:1
position: 3282976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3283148:1
position: 3283148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3283468-3284082:1:exon

position:3283468:1
position: 3283468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057937
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057937
product: mitochondrial outer membrane protein porin 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_010940660.3
SIO_010081: LOC105057937
subclass of: SO_0000673
so part of: LOC105057937
location: join(3272846..3273106,3273218..3273285,3281679..3281789,3281879..3281965,3282045..3282253,3282369..3282963)
location: region:3272846-3282963:1
so has part: feature:3272846-3273106:1:exon
so has part: feature:3273218-3273285:1:exon
so has part: feature:3281679-3281789:1:exon
so has part: feature:3281879-3281965:1:exon
so has part: feature:3282045-3282253:1:exon
so has part: feature:3282369-3282963:1:exon

position:3272846:1
position: 3272846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3282963:1
position: 3282963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3272846-3273106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3273218-3273285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3281679-3281789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3281879-3281965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3282045-3282253:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3282369-3282963:1:exon

LOC105057937
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial outer membrane protein porin 5
translation: MKGPGLFSDIGKKAKDVLTKDYSCDQKLTISTNSASGVGLTSAAVKKGGLYSFDIGTQYKYKNTLINVKVDTDSNVSTTLTMLEILPSMKTIASFKLPDYNSGKLEIQYFHHHASFTTAVALKQSSVVDLSGTVGAHGIAFGAEAGFDTSSGSFTKYSAGISLGKPDYNASIILADKGDALRASYVYHLDESQKNAVVGEITRRFSTNENTFTVGGQYALDPLTTVKSRLNNSGKLAALLQHELKSKSILTISGEFDTKALDRTPKFGLALALKP
SIO_010081: LOC105057937
subclass of: SO_0000673
so part of: LOC105057937
location: join(3273061..3273106,3273218..3273285,3281679..3281789,3281879..3281965,3282045..3282253,3282369..3282675)
location: region:3273061-3282675:1
so has part: feature:3273061-3273106:1:exon
so has part: feature:3273218-3273285:1:exon
so has part: feature:3281679-3281789:1:exon
so has part: feature:3281879-3281965:1:exon
so has part: feature:3282045-3282253:1:exon
so has part: feature:3282369-3282675:1:exon

XP_010938962.1
type: Protein
SIO_000068: ncbiprotein

position:3273061:1
position: 3273061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3282675:1
position: 3282675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3273061-3273106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3273218-3273285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3281679-3281789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3281879-3281965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3282045-3282253:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3282369-3282675:1:exon

LOC105057938
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3284011..3291029)
location: region:3284011-3291029:-1
so has part: feature:3284011-3291029:-1:exon
subclass of: SO_0000010

105057938
type: Gene
SIO_000068: ncbigene

position:3284011:-1
position: 3284011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3291029:-1
position: 3291029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3284011-3291029:-1:exon

LOC105057938
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057938
product: uncharacterized LOC105057938
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_010940662.3
SIO_010081: LOC105057938
subclass of: SO_0000673
so part of: LOC105057938
location: complement(join(3284011..3284437,3288957..3289194,3290637..3291029))
location: region:3284011-3291029:-1
so has part: feature:3290637-3291029:-1:exon
so has part: feature:3288957-3289194:-1:exon
so has part: feature:3284011-3284437:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3290637-3291029:-1:exon

position:3290637:-1
position: 3290637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3288957-3289194:-1:exon

position:3288957:-1
position: 3288957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3289194:-1
position: 3289194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3284011-3284437:-1:exon

position:3284437:-1
position: 3284437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057938
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057938
translation: MASFPPNPPAVSPKTPLNFSLIPSMSEIMESSRAQGLRLRLRSLGPFFRVRAEGEGGAELGRAEGVIRPWLKGKVLHLDSMRMARETLAMDRSIFGLGLFLGAVAVRHGFDRGCTRAELLAINDSPLYHSKLVRFYTRMGFKVVHEVDGSSMGDLAHMLVWGGRGTRMDASIEELLMKWGKRFKPQSQYSSL
SIO_010081: LOC105057938
subclass of: SO_0000673
so part of: LOC105057938
location: complement(join(3289009..3289194,3290637..3291029))
location: region:3289009-3291029:-1
so has part: feature:3290637-3291029:-1:exon
so has part: feature:3289009-3289194:-1:exon

XP_010938964.1
type: Protein
SIO_000068: ncbiprotein

position:3289009:-1
position: 3289009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3290637-3291029:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3289009-3289194:-1:exon

LOC105057939
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3294742..3303976
location: region:3294742-3303976:1
so has part: feature:3294742-3303976:1:exon
subclass of: SO_0000010

105057939
type: Gene
SIO_000068: ncbigene

position:3294742:1
position: 3294742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3303976:1
position: 3303976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3294742-3303976:1:exon

LOC105057939
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057939
product: probable inositol oxygenase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_010940663.2
SIO_010081: LOC105057939
subclass of: SO_0000673
so part of: LOC105057939
location: join(3294742..3294937,3295107..3295206,3295299..3295380,3295499..3295703,3302722..3302781,3302858..3302910,3302996..3303118,3303224..3303293,3303400..3303478,3303579..3303660,3303752..3303976)
location: region:3294742-3303976:1
so has part: feature:3294742-3294937:1:exon
so has part: feature:3295107-3295206:1:exon
so has part: feature:3295299-3295380:1:exon
so has part: feature:3295499-3295703:1:exon
so has part: feature:3302722-3302781:1:exon
so has part: feature:3302858-3302910:1:exon
so has part: feature:3302996-3303118:1:exon
so has part: feature:3303224-3303293:1:exon
so has part: feature:3303400-3303478:1:exon
so has part: feature:3303579-3303660:1:exon
so has part: feature:3303752-3303976:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3294742-3294937:1:exon

position:3294937:1
position: 3294937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3295107-3295206:1:exon

position:3295107:1
position: 3295107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3295206:1
position: 3295206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3295299-3295380:1:exon

position:3295299:1
position: 3295299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3295380:1
position: 3295380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3295499-3295703:1:exon

position:3295499:1
position: 3295499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3295703:1
position: 3295703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3302722-3302781:1:exon

position:3302722:1
position: 3302722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3302781:1
position: 3302781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3302858-3302910:1:exon

position:3302858:1
position: 3302858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3302910:1
position: 3302910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3302996-3303118:1:exon

position:3302996:1
position: 3302996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3303118:1
position: 3303118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3303224-3303293:1:exon

position:3303224:1
position: 3303224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3303293:1
position: 3303293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3303400-3303478:1:exon

position:3303400:1
position: 3303400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3303478:1
position: 3303478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3303579-3303660:1:exon

position:3303579:1
position: 3303579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3303660:1
position: 3303660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3303752-3303976:1:exon

position:3303752:1
position: 3303752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057939
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable inositol oxygenase
translation: MTIAIEQPQIEEGKGKKIPIESKELVSDSGFVTPETNAFGQTFRNYETESERKDSVEEFYRMNHIHQTCEFVKNMREEYIKLNKAKMSIWECCELLNEFVDESDLDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLLHPKFGLLPQWAVVGDTFPVGCAFDESIVHYKHLKENPDCNNPQYNTKFGVYAEGCGLDNLMMSWGHDDYMYMVAKENKTTLPPAALFIIRYHSFYPLHRSGAYKYFINKEDEENLKWLQIFNKYDLYSKSKVRVDAEKVKPYYLSLIEKYFPPKLRW
SIO_010081: LOC105057939
subclass of: SO_0000673
so part of: LOC105057939
location: join(3294907..3294937,3295107..3295206,3295299..3295380,3295499..3295703,3302722..3302781,3302858..3302910,3302996..3303118,3303224..3303293,3303400..3303478,3303579..3303660,3303752..3303778)
location: region:3294907-3303778:1
so has part: feature:3294907-3294937:1:exon
so has part: feature:3295107-3295206:1:exon
so has part: feature:3295299-3295380:1:exon
so has part: feature:3295499-3295703:1:exon
so has part: feature:3302722-3302781:1:exon
so has part: feature:3302858-3302910:1:exon
so has part: feature:3302996-3303118:1:exon
so has part: feature:3303224-3303293:1:exon
so has part: feature:3303400-3303478:1:exon
so has part: feature:3303579-3303660:1:exon
so has part: feature:3303752-3303778:1:exon

XP_010938965.1
type: Protein
SIO_000068: ncbiprotein

position:3294907:1
position: 3294907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3303778:1
position: 3303778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3294907-3294937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3295107-3295206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3295299-3295380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3295499-3295703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3302722-3302781:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3302858-3302910:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3302996-3303118:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3303224-3303293:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3303400-3303478:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3303579-3303660:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3303752-3303778:1:exon

LOC105057940
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057940
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3321513..3323305)
location: region:3321513-3323305:-1
so has part: feature:3321513-3323305:-1:exon
subclass of: SO_0000010

105057940
type: Gene
SIO_000068: ncbigene

position:3321513:-1
position: 3321513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3323305:-1
position: 3323305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3321513-3323305:-1:exon

LOC105057940
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057940
product: F-box/kelch-repeat protein At5g43190
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940664.3
SIO_010081: LOC105057940
subclass of: SO_0000673
so part of: LOC105057940
location: complement(3321513..3323305)
location: region:3321513-3323305:-1
so has part: feature:3321513-3323305:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3321513-3323305:-1:exon

LOC105057940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057940
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/kelch-repeat protein At5g43190
translation: MRKSLPTFYSSSKHSLHMRGRRTEDRMPRREREEQTTPIAQSKPPPPPLPAAAAAAAEEEEMEPAIWGQLPDELLDRILALLPLRTLLALRPTCKRFNSLLVSPSFLSLLHSPSSSPAFLLLSHPQFSHRFLPLYDSFADGWRNLRLLPSAAASPSQLLSSSSGLLCFSLLPSRPSSLLIFNLLTKTSKFVSLPTHDPFSFATLVSLPSSTPHGYKIFLPSSSSTSVFVYDSASFSWTRFPGFDLILDRGNSHQEGVFFDGALYFTTNEPFSVVGFHLQSGKWEPMSSPSLPAELAFVRLVGDGRNRLYLVGGVGRDGISRSLRVWELVGKDGEGKVRAWEEVGRLPEMMCRKFVSVCYHNYSHVYCLWHEGLVCVCCTTWPEVLFYRVARGTWHWLPRCPMLPEKWSCGFRWFSFVPDLYALV
SIO_010081: LOC105057940
subclass of: SO_0000673
so part of: LOC105057940
location: complement(3321831..3323105)
location: region:3321831-3323105:-1
so has part: feature:3321831-3323105:-1:exon

XP_010938966.1
type: Protein
SIO_000068: ncbiprotein

position:3321831:-1
position: 3321831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3323105:-1
position: 3323105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3321831-3323105:-1:exon

LOC105057941
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3380043..3386699
location: region:3380043-3386699:1
so has part: feature:3380043-3386699:1:exon
subclass of: SO_0000010

105057941
type: Gene
SIO_000068: ncbigene

position:3380043:1
position: 3380043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3386699:1
position: 3386699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3380043-3386699:1:exon

LOC105057941
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057941
product: adenylyl-sulfate kinase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_010940665.3
SIO_010081: LOC105057941
subclass of: SO_0000673
so part of: LOC105057941
location: join(3380043..3380584,3381329..3381469,3384682..3384831,3385103..3385221,3385313..3385397,3385569..3385615,3386176..3386699)
location: region:3380043-3386699:1
so has part: feature:3380043-3380584:1:exon
so has part: feature:3381329-3381469:1:exon
so has part: feature:3384682-3384831:1:exon
so has part: feature:3385103-3385221:1:exon
so has part: feature:3385313-3385397:1:exon
so has part: feature:3385569-3385615:1:exon
so has part: feature:3386176-3386699:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3380043-3380584:1:exon

position:3380584:1
position: 3380584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3381329-3381469:1:exon

position:3381329:1
position: 3381329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3381469:1
position: 3381469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3384682-3384831:1:exon

position:3384682:1
position: 3384682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3384831:1
position: 3384831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3385103-3385221:1:exon

position:3385103:1
position: 3385103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3385221:1
position: 3385221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3385313-3385397:1:exon

position:3385313:1
position: 3385313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3385397:1
position: 3385397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3385569-3385615:1:exon

position:3385569:1
position: 3385569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3385615:1
position: 3385615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3386176-3386699:1:exon

position:3386176:1
position: 3386176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057941
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylyl-sulfate kinase 3
translation: MVSRAIPATLRPTPRVGLSATSDPVGRWRRSIGLVATRPRPLPPILTVSPGKETTETVQMTSVEVSNGSASGKKNLVMSTVGNSTNIVWHKCPVGKLGRQKLLKQKGCVIWITGLSGSGKSTLACALSRELYSRGHLAYVLDGDNVRHGLNRDLSFTEVDREENIRRIGEVAKLFADAGIICIASLISPYRRDRDACRALLPDSTFIEVFMNIPLEVCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLDSEIVIEPKVGECPPPAAMAEQIISYLNDNGFLQE
SIO_010081: LOC105057941
subclass of: SO_0000673
so part of: LOC105057941
location: join(3380371..3380584,3381329..3381469,3384682..3384831,3385103..3385221,3385313..3385397,3385569..3385615,3386176..3386274)
location: region:3380371-3386274:1
so has part: feature:3380371-3380584:1:exon
so has part: feature:3381329-3381469:1:exon
so has part: feature:3384682-3384831:1:exon
so has part: feature:3385103-3385221:1:exon
so has part: feature:3385313-3385397:1:exon
so has part: feature:3385569-3385615:1:exon
so has part: feature:3386176-3386274:1:exon

XP_010938967.1
type: Protein
SIO_000068: ncbiprotein

position:3380371:1
position: 3380371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3386274:1
position: 3386274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3380371-3380584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3381329-3381469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3384682-3384831:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3385103-3385221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3385313-3385397:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3385569-3385615:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3386176-3386274:1:exon

LOC105057943
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057943
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3391592..3398377)
location: region:3391592-3398377:-1
so has part: feature:3391592-3398377:-1:exon
subclass of: SO_0000010

105057943
type: Gene
SIO_000068: ncbigene

position:3391592:-1
position: 3391592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3398377:-1
position: 3398377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3391592-3398377:-1:exon

LOC105057943
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057943
product: pentatricopeptide repeat-containing protein At2g16880, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_010940667.3
SIO_010081: LOC105057943
subclass of: SO_0000673
so part of: LOC105057943
location: complement(join(3391592..3392481,3393501..3393558,3395461..3398377))
location: region:3391592-3398377:-1
so has part: feature:3395461-3398377:-1:exon
so has part: feature:3393501-3393558:-1:exon
so has part: feature:3391592-3392481:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3395461-3398377:-1:exon

position:3395461:-1
position: 3395461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3393501-3393558:-1:exon

position:3393501:-1
position: 3393501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3393558:-1
position: 3393558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3391592-3392481:-1:exon

position:3392481:-1
position: 3392481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057943
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057943
product: pentatricopeptide repeat-containing protein At2g16880, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_010940668.3
SIO_010081: LOC105057943
subclass of: SO_0000673
so part of: LOC105057943
location: complement(join(3391593..3392481,3395461..3398377))
location: region:3391593-3398377:-1
so has part: feature:3395461-3398377:-1:exon
so has part: feature:3391593-3392481:-1:exon

position:3391593:-1
position: 3391593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3395461-3398377:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3391593-3392481:-1:exon

LOC105057943
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057943
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At2g16880
translation: METDPSAPPLPADGEPSASLVKTVSSILLSSQVPSAPPLDQSLASFLPRLSPPFIAPIISAAAAAPSFSSPALLLSFYNLCRRRFPALSSNPAAALPSLLALLRPLLSFRKFADAQSLLLSFIPLDRPRLLHHHLLRPNHPPSKALLDTAVSSYARLRQPHLAEQLFQSMKRRRLRPSLGTANILLDALIRSPSPASVPLAVFHDLVDLGVAPNTTTFNILVHGFCSRAQFVDALALLSTMEGFGCSPDTITYNTILDGYCKKGMLKEARDLLAEMKARGLSPDRSTYNTLIAAYCRLGWLKEATKAIEIMTASNFLPDLWTYNMLVAGLCREGRMDEAFRLKDEMEKLRVLPDIVTYNTLINGCFEWRTGSEASQVLEEMRDKGVKPSLVTHNTMVKGLCKEGKMDEAVDSLRKMEEEGLSPDLITYNTLISAYCRAGNVAKAFDLMDEMVGRGFKMDNFTLNTVIHNLCKEKRFDEACKLLCSPPKRGIVPDEVSYGTVIAAYFKDENPNDAMKLWDEMNERKIMPNVATYNSVIGGLCRLGKIEEAIKKLNELLERGLVPDETTYNTIIHGYCREGELEKAFQFHNKMVENSFKPNVITCNILMNGLCNAGKVEKALKLFESWVSKGKKVDIITYNTLIKGLCKEGKIDAALELFADMEEKGLRPDAHSYNVVLCALTEVGRSEEAQGLLSKMVETGKLPEQFTFPLSEEAFSEAGIDRKPERMHDGKTAEDMKDSSATYSECISDLCNRGQFKEAKLVLEEMMQRGITVKSSTYVTLMDGFIKRQKRMTKGAG
SIO_010081: LOC105057943
subclass of: SO_0000673
so part of: LOC105057943
location: complement(3395689..3398082)
location: region:3395689-3398082:-1
so has part: feature:3395689-3398082:-1:exon

XP_010938969.1
type: Protein
SIO_000068: ncbiprotein

position:3395689:-1
position: 3395689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3398082:-1
position: 3398082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3395689-3398082:-1:exon

LOC105057943
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057943
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At2g16880
translation: METDPSAPPLPADGEPSASLVKTVSSILLSSQVPSAPPLDQSLASFLPRLSPPFIAPIISAAAAAPSFSSPALLLSFYNLCRRRFPALSSNPAAALPSLLALLRPLLSFRKFADAQSLLLSFIPLDRPRLLHHHLLRPNHPPSKALLDTAVSSYARLRQPHLAEQLFQSMKRRRLRPSLGTANILLDALIRSPSPASVPLAVFHDLVDLGVAPNTTTFNILVHGFCSRAQFVDALALLSTMEGFGCSPDTITYNTILDGYCKKGMLKEARDLLAEMKARGLSPDRSTYNTLIAAYCRLGWLKEATKAIEIMTASNFLPDLWTYNMLVAGLCREGRMDEAFRLKDEMEKLRVLPDIVTYNTLINGCFEWRTGSEASQVLEEMRDKGVKPSLVTHNTMVKGLCKEGKMDEAVDSLRKMEEEGLSPDLITYNTLISAYCRAGNVAKAFDLMDEMVGRGFKMDNFTLNTVIHNLCKEKRFDEACKLLCSPPKRGIVPDEVSYGTVIAAYFKDENPNDAMKLWDEMNERKIMPNVATYNSVIGGLCRLGKIEEAIKKLNELLERGLVPDETTYNTIIHGYCREGELEKAFQFHNKMVENSFKPNVITCNILMNGLCNAGKVEKALKLFESWVSKGKKVDIITYNTLIKGLCKEGKIDAALELFADMEEKGLRPDAHSYNVVLCALTEVGRSEEAQGLLSKMVETGKLPEQFTFPLSEEAFSEAGIDRKPERMHDGKTAEDMKDSSATYSECISDLCNRGQFKEAKLVLEEMMQRGITVKSSTYVTLMDGFIKRQKRMTKGAG
SIO_010081: LOC105057943
subclass of: SO_0000673
so part of: LOC105057943
location: complement(3395689..3398082)
location: region:3395689-3398082:-1
so has part: feature:3395689-3398082:-1:exon

XP_010938970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3395689-3398082:-1:exon

LOC105057944
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3472018..3483566)
location: region:3472018-3483566:-1
so has part: feature:3472018-3483566:-1:exon
subclass of: SO_0000010

105057944
type: Gene
SIO_000068: ncbigene

position:3472018:-1
position: 3472018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3483566:-1
position: 3483566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3472018-3483566:-1:exon

LOC105057944
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057944
product: uncharacterized LOC105057944
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_010940670.3
SIO_010081: LOC105057944
subclass of: SO_0000673
so part of: LOC105057944
location: complement(join(3472018..3472361,3472550..3472753,3472845..3472915,3473016..3473163,3483280..3483566))
location: region:3472018-3483566:-1
so has part: feature:3483280-3483566:-1:exon
so has part: feature:3473016-3473163:-1:exon
so has part: feature:3472845-3472915:-1:exon
so has part: feature:3472550-3472753:-1:exon
so has part: feature:3472018-3472361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3483280-3483566:-1:exon

position:3483280:-1
position: 3483280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3473016-3473163:-1:exon

position:3473016:-1
position: 3473016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3473163:-1
position: 3473163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3472845-3472915:-1:exon

position:3472845:-1
position: 3472845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3472915:-1
position: 3472915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3472550-3472753:-1:exon

position:3472550:-1
position: 3472550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3472753:-1
position: 3472753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3472018-3472361:-1:exon

position:3472361:-1
position: 3472361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057944
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057944
translation: MGGGSSANSSGEEDGDAEWKAAIDSVAAVNLGTSTSNRPATPQSVAGGSTAPDDPRDEQLKKPQTPGLKLYQIKAQKLLDDLLEKSLEMVTNPIPMSNDNPQSNGGGIQLFRKAPPGIILDPIDPHPQPRKRPKILPGKEVDEKSKKFRRQLQSVIVDGNNIMAAAREACQRSLARFEAKEAAAKAAAKKEEERVLELKKVRGEKWLPSIAREMQGKT
SIO_010081: LOC105057944
subclass of: SO_0000673
so part of: LOC105057944
location: complement(join(3472350..3472361,3472550..3472753,3472845..3472915,3473016..3473163,3483280..3483501))
location: region:3472350-3483501:-1
so has part: feature:3483280-3483501:-1:exon
so has part: feature:3473016-3473163:-1:exon
so has part: feature:3472845-3472915:-1:exon
so has part: feature:3472550-3472753:-1:exon
so has part: feature:3472350-3472361:-1:exon

XP_010938972.1
type: Protein
SIO_000068: ncbiprotein

position:3472350:-1
position: 3472350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3483501:-1
position: 3483501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3483280-3483501:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3473016-3473163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3472845-3472915:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3472550-3472753:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3472350-3472361:-1:exon

LOC105057945
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057945
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3558460..3576339
location: region:3558460-3576339:1
so has part: feature:3558460-3576339:1:exon
subclass of: SO_0000010

105057945
type: Gene
SIO_000068: ncbigene

position:3558460:1
position: 3558460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3576339:1
position: 3576339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3558460-3576339:1:exon

LOC105057945
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057945
product: mechanosensitive ion channel protein 2, chloroplastic, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019855013.2
SIO_010081: LOC105057945
subclass of: SO_0000673
so part of: LOC105057945
location: join(3558460..3558677,3559653..3559706,3559789..3559848,3560479..3560636,3562160..3562280,3562374..3562468,3562575..3562688,3564979..3565039,3565678..3565827,3565935..3566045,3567147..3567314,3567412..3567549,3572934..3572990,3575193..3576339)
location: region:3558460-3576339:1
so has part: feature:3558460-3558677:1:exon
so has part: feature:3559653-3559706:1:exon
so has part: feature:3559789-3559848:1:exon
so has part: feature:3560479-3560636:1:exon
so has part: feature:3562160-3562280:1:exon
so has part: feature:3562374-3562468:1:exon
so has part: feature:3562575-3562688:1:exon
so has part: feature:3564979-3565039:1:exon
so has part: feature:3565678-3565827:1:exon
so has part: feature:3565935-3566045:1:exon
so has part: feature:3567147-3567314:1:exon
so has part: feature:3567412-3567549:1:exon
so has part: feature:3572934-3572990:1:exon
so has part: feature:3575193-3576339:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3558460-3558677:1:exon

position:3558677:1
position: 3558677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3559653-3559706:1:exon

position:3559653:1
position: 3559653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3559706:1
position: 3559706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3559789-3559848:1:exon

position:3559789:1
position: 3559789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3559848:1
position: 3559848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3560479-3560636:1:exon

position:3560479:1
position: 3560479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3560636:1
position: 3560636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3562160-3562280:1:exon

position:3562160:1
position: 3562160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3562280:1
position: 3562280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3562374-3562468:1:exon

position:3562374:1
position: 3562374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3562468:1
position: 3562468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3562575-3562688:1:exon

position:3562575:1
position: 3562575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3562688:1
position: 3562688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3564979-3565039:1:exon

position:3564979:1
position: 3564979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3565039:1
position: 3565039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3565678-3565827:1:exon

position:3565678:1
position: 3565678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3565827:1
position: 3565827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3565935-3566045:1:exon

position:3565935:1
position: 3565935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3566045:1
position: 3566045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3567147-3567314:1:exon

position:3567147:1
position: 3567147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3567314:1
position: 3567314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3567412-3567549:1:exon

position:3567412:1
position: 3567412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3567549:1
position: 3567549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3572934-3572990:1:exon

position:3572934:1
position: 3572934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3572990:1
position: 3572990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3575193-3576339:1:exon

position:3575193:1
position: 3575193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057945
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057945
product: mechanosensitive ion channel protein 2, chloroplastic, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_010940672.3
SIO_010081: LOC105057945
subclass of: SO_0000673
so part of: LOC105057945
location: join(3558467..3558677,3559485..3559706,3559789..3559848,3560479..3560636,3562160..3562280,3562374..3562468,3562575..3562688,3564979..3565039,3565678..3565827,3565935..3566045,3567147..3567314,3567412..3567549,3572934..3572990,3575193..3576339)
location: region:3558467-3576339:1
so has part: feature:3558467-3558677:1:exon
so has part: feature:3559485-3559706:1:exon
so has part: feature:3559789-3559848:1:exon
so has part: feature:3560479-3560636:1:exon
so has part: feature:3562160-3562280:1:exon
so has part: feature:3562374-3562468:1:exon
so has part: feature:3562575-3562688:1:exon
so has part: feature:3564979-3565039:1:exon
so has part: feature:3565678-3565827:1:exon
so has part: feature:3565935-3566045:1:exon
so has part: feature:3567147-3567314:1:exon
so has part: feature:3567412-3567549:1:exon
so has part: feature:3572934-3572990:1:exon
so has part: feature:3575193-3576339:1:exon

position:3558467:1
position: 3558467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3558467-3558677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3559485-3559706:1:exon

position:3559485:1
position: 3559485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3559789-3559848:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3560479-3560636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3562160-3562280:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3562374-3562468:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3562575-3562688:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3564979-3565039:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3565678-3565827:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3565935-3566045:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3567147-3567314:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3567412-3567549:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3572934-3572990:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3575193-3576339:1:exon

LOC105057945
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057945
product: mechanosensitive ion channel protein 2, chloroplastic, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_010940673.3
SIO_010081: LOC105057945
subclass of: SO_0000673
so part of: LOC105057945
location: join(3558467..3558677,3559485..3559706,3559789..3559848,3560479..3560636,3562160..3562280,3562374..3562468,3562575..3562688,3564979..3565039,3565678..3565827,3565935..3566045,3567147..3567314,3567436..3567549,3572934..3572990,3575193..3576339)
location: region:3558467-3576339:1
so has part: feature:3558467-3558677:1:exon
so has part: feature:3559485-3559706:1:exon
so has part: feature:3559789-3559848:1:exon
so has part: feature:3560479-3560636:1:exon
so has part: feature:3562160-3562280:1:exon
so has part: feature:3562374-3562468:1:exon
so has part: feature:3562575-3562688:1:exon
so has part: feature:3564979-3565039:1:exon
so has part: feature:3565678-3565827:1:exon
so has part: feature:3565935-3566045:1:exon
so has part: feature:3567147-3567314:1:exon
so has part: feature:3567436-3567549:1:exon
so has part: feature:3572934-3572990:1:exon
so has part: feature:3575193-3576339:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3558467-3558677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3559485-3559706:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3559789-3559848:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3560479-3560636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3562160-3562280:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3562374-3562468:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3562575-3562688:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3564979-3565039:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3565678-3565827:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3565935-3566045:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3567147-3567314:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3567436-3567549:1:exon

position:3567436:1
position: 3567436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3572934-3572990:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3575193-3576339:1:exon

LOC105057945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057945
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mechanosensitive ion channel protein 3, chloroplastic isoform X1
translation: MAVGASPQLFHEFGVFKRFGQANQFKSSEMKSWHHLPSFSFSSCASRQDVWSLHVSDRINKPVLLIPYRYNVFISRSFAVPSSVREIPLLKSTSLALRRSYDALLASPLTLQLVPAVGIIAFAVWGLGPFMRSIRSLFHNDNNWKKSKTYHVSTSYIQPLLLWAGATLICRALDPVVLPSEASQAVKQRLLSFVRSLSTVLAFAYCLSSLIQQTQKFFMETSGFDGTRNMGFEFAGKAVYTAVWVAAFSLFMELLGFSTQKWITAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDISKINPSHAFLEQNIVADMRKVLAKNSQIEQQRLHRRVFLENINPENQALLILISCFVKTSHFEEYLCVKEAVLLDLLRVISHHRARLATPIRTVQKIYGDADMENIPYSETILTRSATAANRPFLLIEPSPRINGDDKAKPRGSRTNEEQNSKATAASGPRATSSSEGAILNNSDKQLQKKKNSGDSRSKSNKADPATAPSLNSQLESLDSVGSTSKSGENPLSSEAVTEQVDGTSPVHAKNEGEKVPTTTSPVARPAFEDNIVLGVALGGSKQTLPIEEGMGSVASSSEANELDKKGSLSSTKDRKEQIPAVSSQAKADQRDQER
SIO_010081: LOC105057945
subclass of: SO_0000673
so part of: LOC105057945
location: join(3559629..3559706,3559789..3559848,3560479..3560636,3562160..3562280,3562374..3562468,3562575..3562688,3564979..3565039,3565678..3565827,3565935..3566045,3567147..3567314,3567412..3567549,3572934..3572990,3575193..3575966)
location: region:3559629-3575966:1
so has part: feature:3559629-3559706:1:exon
so has part: feature:3559789-3559848:1:exon
so has part: feature:3560479-3560636:1:exon
so has part: feature:3562160-3562280:1:exon
so has part: feature:3562374-3562468:1:exon
so has part: feature:3562575-3562688:1:exon
so has part: feature:3564979-3565039:1:exon
so has part: feature:3565678-3565827:1:exon
so has part: feature:3565935-3566045:1:exon
so has part: feature:3567147-3567314:1:exon
so has part: feature:3567412-3567549:1:exon
so has part: feature:3572934-3572990:1:exon
so has part: feature:3575193-3575966:1:exon

XP_010938974.1
type: Protein
SIO_000068: ncbiprotein

position:3559629:1
position: 3559629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3575966:1
position: 3575966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3559629-3559706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3559789-3559848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3560479-3560636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3562160-3562280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3562374-3562468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3562575-3562688:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3564979-3565039:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3565678-3565827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3565935-3566045:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3567147-3567314:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3567412-3567549:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3572934-3572990:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3575193-3575966:1:exon

LOC105057945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057945
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mechanosensitive ion channel protein 3, chloroplastic isoform X2
translation: MAVGASPQLFHEFGVFKRFGQANQFKSSEMKSWHHLPSFSFSSCASRQDVWSLHVSDRINKPVLLIPYRYNVFISRSFAVPSSVREIPLLKSTSLALRRSYDALLASPLTLQLVPAVGIIAFAVWGLGPFMRSIRSLFHNDNNWKKSKTYHVSTSYIQPLLLWAGATLICRALDPVVLPSEASQAVKQRLLSFVRSLSTVLAFAYCLSSLIQQTQKFFMETSGFDGTRNMGFEFAGKAVYTAVWVAAFSLFMELLGFSTQKWITAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDISKINNIVADMRKVLAKNSQIEQQRLHRRVFLENINPENQALLILISCFVKTSHFEEYLCVKEAVLLDLLRVISHHRARLATPIRTVQKIYGDADMENIPYSETILTRSATAANRPFLLIEPSPRINGDDKAKPRGSRTNEEQNSKATAASGPRATSSSEGAILNNSDKQLQKKKNSGDSRSKSNKADPATAPSLNSQLESLDSVGSTSKSGENPLSSEAVTEQVDGTSPVHAKNEGEKVPTTTSPVARPAFEDNIVLGVALGGSKQTLPIEEGMGSVASSSEANELDKKGSLSSTKDRKEQIPAVSSQAKADQRDQER
SIO_010081: LOC105057945
subclass of: SO_0000673
so part of: LOC105057945
location: join(3559629..3559706,3559789..3559848,3560479..3560636,3562160..3562280,3562374..3562468,3562575..3562688,3564979..3565039,3565678..3565827,3565935..3566045,3567147..3567314,3567436..3567549,3572934..3572990,3575193..3575966)
location: region:3559629-3575966:1
so has part: feature:3559629-3559706:1:exon
so has part: feature:3559789-3559848:1:exon
so has part: feature:3560479-3560636:1:exon
so has part: feature:3562160-3562280:1:exon
so has part: feature:3562374-3562468:1:exon
so has part: feature:3562575-3562688:1:exon
so has part: feature:3564979-3565039:1:exon
so has part: feature:3565678-3565827:1:exon
so has part: feature:3565935-3566045:1:exon
so has part: feature:3567147-3567314:1:exon
so has part: feature:3567436-3567549:1:exon
so has part: feature:3572934-3572990:1:exon
so has part: feature:3575193-3575966:1:exon

XP_010938975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3559629-3559706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3559789-3559848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3560479-3560636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3562160-3562280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3562374-3562468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3562575-3562688:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3564979-3565039:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3565678-3565827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3565935-3566045:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3567147-3567314:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3567436-3567549:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3572934-3572990:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3575193-3575966:1:exon

LOC105057945
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057945
product: mechanosensitive ion channel protein 2, chloroplastic, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_010940674.3
SIO_010081: LOC105057945
subclass of: SO_0000673
so part of: LOC105057945
location: join(3559635..3559706,3559789..3559848,3560479..3560636,3562160..3562280,3562374..3562468,3562559..3562688,3564979..3565039,3565678..3565827,3565935..3566045,3567147..3567314,3567412..3567549,3572934..3572990,3575193..3576339)
location: region:3559635-3576339:1
so has part: feature:3559635-3559706:1:exon
so has part: feature:3559789-3559848:1:exon
so has part: feature:3560479-3560636:1:exon
so has part: feature:3562160-3562280:1:exon
so has part: feature:3562374-3562468:1:exon
so has part: feature:3562559-3562688:1:exon
so has part: feature:3564979-3565039:1:exon
so has part: feature:3565678-3565827:1:exon
so has part: feature:3565935-3566045:1:exon
so has part: feature:3567147-3567314:1:exon
so has part: feature:3567412-3567549:1:exon
so has part: feature:3572934-3572990:1:exon
so has part: feature:3575193-3576339:1:exon

position:3559635:1
position: 3559635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3559635-3559706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3559789-3559848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3560479-3560636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3562160-3562280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3562374-3562468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3562559-3562688:1:exon

position:3562559:1
position: 3562559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3564979-3565039:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3565678-3565827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3565935-3566045:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3567147-3567314:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3567412-3567549:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3572934-3572990:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3575193-3576339:1:exon

LOC105057945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057945
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mechanosensitive ion channel protein 3, chloroplastic isoform X3
translation: MKSWHHLPSFSFSSCASRQDVWSLHVSDRINKPVLLIPYRYNVFISRSFAVPSSVREIPLLKSTSLALRRSYDALLASPLTLQLVPAVGIIAFAVWGLGPFMRSIRSLFHNDNNWKKSKTYHVSTSYIQPLLLWAGATLICRALDPVVLPSEASQAVKQRLLSFVRSLSTVLAFAYCLSSLIQQTQKFFMETSGFDGTRNMGFEFAGKAVYTAVWVAAFSLFMELLGFSTQKWITAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDISKINPSHAFLEQNIVADMRKVLAKNSQIEQQRLHRRVFLENINPENQALLILISCFVKTSHFEEYLCVKEAVLLDLLRVISHHRARLATPIRTVQKIYGDADMENIPYSETILTRSATAANRPFLLIEPSPRINGDDKAKPRGSRTNEEQNSKATAASGPRATSSSEGAILNNSDKQLQKKKNSGDSRSKSNKADPATAPSLNSQLESLDSVGSTSKSGENPLSSEAVTEQVDGTSPVHAKNEGEKVPTTTSPVARPAFEDNIVLGVALGGSKQTLPIEEGMGSVASSSEANELDKKGSLSSTKDRKEQIPAVSSQAKADQRDQER
SIO_010081: LOC105057945
subclass of: SO_0000673
so part of: LOC105057945
location: join(3559798..3559848,3560479..3560636,3562160..3562280,3562374..3562468,3562575..3562688,3564979..3565039,3565678..3565827,3565935..3566045,3567147..3567314,3567412..3567549,3572934..3572990,3575193..3575966)
location: region:3559798-3575966:1
so has part: feature:3559798-3559848:1:exon
so has part: feature:3560479-3560636:1:exon
so has part: feature:3562160-3562280:1:exon
so has part: feature:3562374-3562468:1:exon
so has part: feature:3562575-3562688:1:exon
so has part: feature:3564979-3565039:1:exon
so has part: feature:3565678-3565827:1:exon
so has part: feature:3565935-3566045:1:exon
so has part: feature:3567147-3567314:1:exon
so has part: feature:3567412-3567549:1:exon
so has part: feature:3572934-3572990:1:exon
so has part: feature:3575193-3575966:1:exon

XP_019710572.1
type: Protein
SIO_000068: ncbiprotein

position:3559798:1
position: 3559798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3559798-3559848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3560479-3560636:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3562160-3562280:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3562374-3562468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3562575-3562688:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3564979-3565039:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3565678-3565827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3565935-3566045:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3567147-3567314:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3567412-3567549:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3572934-3572990:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3575193-3575966:1:exon

LOC105057945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057945
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mechanosensitive ion channel protein 2, chloroplastic isoform X4
translation: MSLPHIFNHFCFGLEQHSYAAGCFNRALDPVVLPSEASQAVKQRLLSFVRSLSTVLAFAYCLSSLIQQTQKFFMETSGFDGTRNMGFEFAGKAVYTAVWVAAFSLFMELLGFSTQKWITAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDISKINPSHAFLEQNIVADMRKVLAKNSQIEQQRLHRRVFLENINPENQALLILISCFVKTSHFEEYLCVKEAVLLDLLRVISHHRARLATPIRTVQKIYGDADMENIPYSETILTRSATAANRPFLLIEPSPRINGDDKAKPRGSRTNEEQNSKATAASGPRATSSSEGAILNNSDKQLQKKKNSGDSRSKSNKADPATAPSLNSQLESLDSVGSTSKSGENPLSSEAVTEQVDGTSPVHAKNEGEKVPTTTSPVARPAFEDNIVLGVALGGSKQTLPIEEGMGSVASSSEANELDKKGSLSSTKDRKEQIPAVSSQAKADQRDQER
SIO_010081: LOC105057945
subclass of: SO_0000673
so part of: LOC105057945
location: join(3562408..3562468,3562559..3562688,3564979..3565039,3565678..3565827,3565935..3566045,3567147..3567314,3567412..3567549,3572934..3572990,3575193..3575966)
location: region:3562408-3575966:1
so has part: feature:3562408-3562468:1:exon
so has part: feature:3562559-3562688:1:exon
so has part: feature:3564979-3565039:1:exon
so has part: feature:3565678-3565827:1:exon
so has part: feature:3565935-3566045:1:exon
so has part: feature:3567147-3567314:1:exon
so has part: feature:3567412-3567549:1:exon
so has part: feature:3572934-3572990:1:exon
so has part: feature:3575193-3575966:1:exon

XP_010938976.1
type: Protein
SIO_000068: ncbiprotein

position:3562408:1
position: 3562408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3562408-3562468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3562559-3562688:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3564979-3565039:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3565678-3565827:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3565935-3566045:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3567147-3567314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3567412-3567549:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3572934-3572990:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3575193-3575966:1:exon

LOC105057946
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057946
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3582998..3593821
location: region:3582998-3593821:1
so has part: feature:3582998-3593821:1:exon
subclass of: SO_0000010

105057946
type: Gene
SIO_000068: ncbigene

position:3582998:1
position: 3582998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3593821:1
position: 3593821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3582998-3593821:1:exon

LOC105057946
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057946
product: peptidyl-prolyl cis-trans isomerase CYP65, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_010940675.3
SIO_010081: LOC105057946
subclass of: SO_0000673
so part of: LOC105057946
location: join(3582998..3583286,3583411..3583473,3583590..3583693,3589826..3589917,3589998..3590087,3590176..3590251,3590346..3590719,3590827..3591083,3591165..3591453,3592681..3592788,3592878..3593821)
location: region:3582998-3593821:1
so has part: feature:3582998-3583286:1:exon
so has part: feature:3583411-3583473:1:exon
so has part: feature:3583590-3583693:1:exon
so has part: feature:3589826-3589917:1:exon
so has part: feature:3589998-3590087:1:exon
so has part: feature:3590176-3590251:1:exon
so has part: feature:3590346-3590719:1:exon
so has part: feature:3590827-3591083:1:exon
so has part: feature:3591165-3591453:1:exon
so has part: feature:3592681-3592788:1:exon
so has part: feature:3592878-3593821:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3582998-3583286:1:exon

position:3583286:1
position: 3583286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3583411-3583473:1:exon

position:3583411:1
position: 3583411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3583473:1
position: 3583473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3583590-3583693:1:exon

position:3583590:1
position: 3583590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3583693:1
position: 3583693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3589826-3589917:1:exon

position:3589826:1
position: 3589826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3589917:1
position: 3589917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3589998-3590087:1:exon

position:3589998:1
position: 3589998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3590087:1
position: 3590087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3590176-3590251:1:exon

position:3590176:1
position: 3590176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3590251:1
position: 3590251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3590346-3590719:1:exon

position:3590346:1
position: 3590346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3590719:1
position: 3590719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3590827-3591083:1:exon

position:3590827:1
position: 3590827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3591083:1
position: 3591083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3591165-3591453:1:exon

position:3591165:1
position: 3591165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3591453:1
position: 3591453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3592681-3592788:1:exon

position:3592681:1
position: 3592681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3592788:1
position: 3592788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3592878-3593821:1:exon

position:3592878:1
position: 3592878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057946
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105057946
product: peptidyl-prolyl cis-trans isomerase CYP65, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XR_834049.3
SIO_010081: LOC105057946
so part of: LOC105057946
location: join(3582998..3583286,3583411..3583473,3583590..3583693,3589826..3589917,3589998..3590087,3590176..3590251,3590346..3590719,3590827..3591083,3591165..3591453,3592681..3592788,3592878..3593374,3593457..3593821)
location: region:3582998-3593821:1
so has part: feature:3582998-3583286:1:exon
so has part: feature:3583411-3583473:1:exon
so has part: feature:3583590-3583693:1:exon
so has part: feature:3589826-3589917:1:exon
so has part: feature:3589998-3590087:1:exon
so has part: feature:3590176-3590251:1:exon
so has part: feature:3590346-3590719:1:exon
so has part: feature:3590827-3591083:1:exon
so has part: feature:3591165-3591453:1:exon
so has part: feature:3592681-3592788:1:exon
so has part: feature:3592878-3593374:1:exon
so has part: feature:3593457-3593821:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3582998-3583286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3583411-3583473:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3583590-3583693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3589826-3589917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3589998-3590087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3590176-3590251:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3590346-3590719:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3590827-3591083:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3591165-3591453:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3592681-3592788:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3592878-3593374:1:exon

position:3593374:1
position: 3593374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3593457-3593821:1:exon

position:3593457:1
position: 3593457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057946
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057946
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase CYP65
translation: MGKKQHSKDRMFITKTEWATEWGGAKSKETSTPFKRLPFYCCSLTFTPFEDPVCTADGSVFDIMNILPYIKKYGRHPVTGGPLKQEDLIPLTFHKNSDGEYHCPVLNKVFTEFTHIVAVKTTGNVFCYEAIKELNVKTKNWKELLTDEPFTKDDLITIQNPNALDSKLLLEFDHVKNSLKLDDEDLRRMKEDPLYNINVSGDIKQMLQELGTEKGKLAALHGGGGSKAQNERAAALGAILAARSRVKEDSKSSANGESKSTQGFSIVDAASAAVHGRSAAAAKAASGDKTAARIALHMAGERAPVNAKLVKSRFTTGAASRSFTSTAYDPVTKNEFEYVKVEKNPKKKGYVQLHTTHGDLNLELHCDLTPRTCENFITLCENGYYNGVAFHRNIRNFMIQGGDPTGTGKGGQSIWGKPFKDELNSKLLHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGMVVGGLTSLASMEKVPVDDDDRPLEEIKITSVTVFVNPYTETDEEEQQAEEEKKATDDDRDKVGAWFSNPGTGVTGSVGVGGGVGKYLKTRPSGTDSTAGNGVGTDDSSKKRKVEVKSVEYKNFSGW
SIO_010081: LOC105057946
subclass of: SO_0000673
so part of: LOC105057946
location: join(3583159..3583286,3583411..3583473,3583590..3583693,3589826..3589917,3589998..3590087,3590176..3590251,3590346..3590719,3590827..3591083,3591165..3591453,3592681..3592788,3592878..3593081)
location: region:3583159-3593081:1
so has part: feature:3583159-3583286:1:exon
so has part: feature:3583411-3583473:1:exon
so has part: feature:3583590-3583693:1:exon
so has part: feature:3589826-3589917:1:exon
so has part: feature:3589998-3590087:1:exon
so has part: feature:3590176-3590251:1:exon
so has part: feature:3590346-3590719:1:exon
so has part: feature:3590827-3591083:1:exon
so has part: feature:3591165-3591453:1:exon
so has part: feature:3592681-3592788:1:exon
so has part: feature:3592878-3593081:1:exon

XP_010938977.1
type: Protein
SIO_000068: ncbiprotein

position:3583159:1
position: 3583159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3593081:1
position: 3593081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3583159-3583286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3583411-3583473:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3583590-3583693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3589826-3589917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3589998-3590087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3590176-3590251:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3590346-3590719:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3590827-3591083:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3591165-3591453:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3592681-3592788:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3592878-3593081:1:exon

LOC105057947
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3631128..3634217
location: region:3631128-3634217:1
so has part: feature:3631128-3634217:1:exon
subclass of: SO_0000010

105057947
type: Gene
SIO_000068: ncbigene

position:3631128:1
position: 3631128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3634217:1
position: 3634217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3631128-3634217:1:exon

LOC105057947
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057947
product: protein SHORT-ROOT 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940676.3
SIO_010081: LOC105057947
subclass of: SO_0000673
so part of: LOC105057947
location: 3631128..3634217
location: region:3631128-3634217:1
so has part: feature:3631128-3634217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3631128-3634217:1:exon

LOC105057947
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SHORT-ROOT 1-like
translation: MDTLFRLVSLQSSDQQSSFNSSRTSSGSRTSKAHHFLHHPFQNQEEELYREECGNNYHLYMDEDFSSSSSSKHFHPHPSTTTTTTTPPVPSTAAATPTISSTAHVLFEPADFSFPPDLNIDFASPSSSSSAAGAAVPGGGGGWAAQLLLECARAVAARDSQRVQQLMWMLNELASPYGDTEQKVASYFLQALFARLTSAGPRTLRTLAAASDRTCSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLDAAAAGGGSQPQRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVSSASPSAAVQRVMKEIVQRMEKFARLMGVPFKFNVIHHAGDLSELDLECLDLRDGGDAALAVNCVNALHGVSPAGRRRDAFIASLRRLQPRIVTVVEEEADLEAACCGDGGGEEGEEGFLKGFRESLRFFSAYFDSLEESFPRTSNERLALERAAGRAMVDLVACPAAESAERRETASGWSRRMREAGFAPAAFSEDVADDVKALLRRYREGWSMRVAEEAEDPGSAAAGIFLAWKDQPVVWASAWKP
SIO_010081: LOC105057947
subclass of: SO_0000673
so part of: LOC105057947
location: 3632166..3633815
location: region:3632166-3633815:1
so has part: feature:3632166-3633815:1:exon

XP_010938978.1
type: Protein
SIO_000068: ncbiprotein

position:3632166:1
position: 3632166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3633815:1
position: 3633815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3632166-3633815:1:exon

LOC105057948
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3639106..3659448)
location: region:3639106-3659448:-1
so has part: feature:3639106-3659448:-1:exon
subclass of: SO_0000010

105057948
type: Gene
SIO_000068: ncbigene

position:3639106:-1
position: 3639106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3659448:-1
position: 3659448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3639106-3659448:-1:exon

LOC105057948
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057948
product: uncharacterized LOC105057948, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_010940677.2
SIO_010081: LOC105057948
subclass of: SO_0000673
so part of: LOC105057948
location: complement(join(3639106..3640193,3657687..3658285,3659169..3659448))
location: region:3639106-3659448:-1
so has part: feature:3659169-3659448:-1:exon
so has part: feature:3657687-3658285:-1:exon
so has part: feature:3639106-3640193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3659169-3659448:-1:exon

position:3659169:-1
position: 3659169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3657687-3658285:-1:exon

position:3657687:-1
position: 3657687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3658285:-1
position: 3658285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3639106-3640193:-1:exon

position:3640193:-1
position: 3640193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057948
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057948
product: uncharacterized LOC105057948, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_010940680.3
SIO_010081: LOC105057948
subclass of: SO_0000673
so part of: LOC105057948
location: complement(join(3639106..3640193,3657687..3658264,3659169..3659447))
location: region:3639106-3659447:-1
so has part: feature:3659169-3659447:-1:exon
so has part: feature:3657687-3658264:-1:exon
so has part: feature:3639106-3640193:-1:exon

position:3659447:-1
position: 3659447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3659169-3659447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3657687-3658264:-1:exon

position:3658264:-1
position: 3658264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3639106-3640193:-1:exon

LOC105057948
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057948
product: uncharacterized LOC105057948, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_010940681.3
SIO_010081: LOC105057948
subclass of: SO_0000673
so part of: LOC105057948
location: complement(join(3639106..3640193,3657687..3658264,3658947..3659118))
location: region:3639106-3659118:-1
so has part: feature:3658947-3659118:-1:exon
so has part: feature:3657687-3658264:-1:exon
so has part: feature:3639106-3640193:-1:exon

position:3659118:-1
position: 3659118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3658947-3659118:-1:exon

position:3658947:-1
position: 3658947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3657687-3658264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3639106-3640193:-1:exon

LOC105057948
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057948
translation: MRMRNKNQKSSAFQCSAGTRCSVSLVLWSLVGCILMVHFYSLIHQKDKGEIHIDSSHLSVTRELEEVEEESLYLPRPRGKRSPRAVKRRGPRKPPSVVDEFLDESSELHALFFPDRKSAIDPNKKGNDSMYYYPGRLWLDTEGNPIQAHGGGILFDERTETYYWYGENKDGLTYHAYRKAAARVDIIGVSCYSSKDLWEWTNEGIVLSGERTNASHDLHVSNVLERPKVIYNDKSGQYVMWMHIDDANYTKASVGVAVSDSPTGPFSYLYSMRPHGFDSRDMTIFKDDDGKAYLIYSSEDNSELHIGPLTDDYLNVTRVGRRILVGRHREAPALFKYEGTYYMITSGCTGWAPNRALAHAAESIMGPWETIGNPCVGGNKIFRWTTFFAQSTFVVPLPGLPGSFIFMADRWKPAELRDSRYVWLPLTVGGVADEPLEYNFGFPLWSRLSIYWHRRWRLPEEWRRTT
SIO_010081: LOC105057948
subclass of: SO_0000673
so part of: LOC105057948
location: complement(join(3639342..3640193,3657687..3658235))
location: region:3639342-3658235:-1
so has part: feature:3657687-3658235:-1:exon
so has part: feature:3639342-3640193:-1:exon

XP_010938979.1
type: Protein
SIO_000068: ncbiprotein

position:3639342:-1
position: 3639342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3658235:-1
position: 3658235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3657687-3658235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3639342-3640193:-1:exon

LOC105057948
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057948
translation: MRMRNKNQKSSAFQCSAGTRCSVSLVLWSLVGCILMVHFYSLIHQKDKGEIHIDSSHLSVTRELEEVEEESLYLPRPRGKRSPRAVKRRGPRKPPSVVDEFLDESSELHALFFPDRKSAIDPNKKGNDSMYYYPGRLWLDTEGNPIQAHGGGILFDERTETYYWYGENKDGLTYHAYRKAAARVDIIGVSCYSSKDLWEWTNEGIVLSGERTNASHDLHVSNVLERPKVIYNDKSGQYVMWMHIDDANYTKASVGVAVSDSPTGPFSYLYSMRPHGFDSRDMTIFKDDDGKAYLIYSSEDNSELHIGPLTDDYLNVTRVGRRILVGRHREAPALFKYEGTYYMITSGCTGWAPNRALAHAAESIMGPWETIGNPCVGGNKIFRWTTFFAQSTFVVPLPGLPGSFIFMADRWKPAELRDSRYVWLPLTVGGVADEPLEYNFGFPLWSRLSIYWHRRWRLPEEWRRTT
SIO_010081: LOC105057948
subclass of: SO_0000673
so part of: LOC105057948
location: complement(join(3639342..3640193,3657687..3658235))
location: region:3639342-3658235:-1
so has part: feature:3657687-3658235:-1:exon
so has part: feature:3639342-3640193:-1:exon

XP_010938982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3657687-3658235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3639342-3640193:-1:exon

LOC105057948
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057948
translation: MRMRNKNQKSSAFQCSAGTRCSVSLVLWSLVGCILMVHFYSLIHQKDKGEIHIDSSHLSVTRELEEVEEESLYLPRPRGKRSPRAVKRRGPRKPPSVVDEFLDESSELHALFFPDRKSAIDPNKKGNDSMYYYPGRLWLDTEGNPIQAHGGGILFDERTETYYWYGENKDGLTYHAYRKAAARVDIIGVSCYSSKDLWEWTNEGIVLSGERTNASHDLHVSNVLERPKVIYNDKSGQYVMWMHIDDANYTKASVGVAVSDSPTGPFSYLYSMRPHGFDSRDMTIFKDDDGKAYLIYSSEDNSELHIGPLTDDYLNVTRVGRRILVGRHREAPALFKYEGTYYMITSGCTGWAPNRALAHAAESIMGPWETIGNPCVGGNKIFRWTTFFAQSTFVVPLPGLPGSFIFMADRWKPAELRDSRYVWLPLTVGGVADEPLEYNFGFPLWSRLSIYWHRRWRLPEEWRRTT
SIO_010081: LOC105057948
subclass of: SO_0000673
so part of: LOC105057948
location: complement(join(3639342..3640193,3657687..3658235))
location: region:3639342-3658235:-1
so has part: feature:3657687-3658235:-1:exon
so has part: feature:3639342-3640193:-1:exon

XP_010938983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3657687-3658235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3639342-3640193:-1:exon

LOC105057949
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3802368..3817464)
location: region:3802368-3817464:-1
so has part: feature:3802368-3817464:-1:exon
subclass of: SO_0000010

105057949
type: Gene
SIO_000068: ncbigene

position:3802368:-1
position: 3802368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3817464:-1
position: 3817464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3802368-3817464:-1:exon

LOC105057949
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057949
product: protein NPGR1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019854976.2
SIO_010081: LOC105057949
subclass of: SO_0000673
so part of: LOC105057949
location: complement(join(3802368..3803195,3811401..3811548,3811707..3812923,3815621..3815879,3815974..3816402,3817325..3817464))
location: region:3802368-3817464:-1
so has part: feature:3817325-3817464:-1:exon
so has part: feature:3815974-3816402:-1:exon
so has part: feature:3815621-3815879:-1:exon
so has part: feature:3811707-3812923:-1:exon
so has part: feature:3811401-3811548:-1:exon
so has part: feature:3802368-3803195:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3817325-3817464:-1:exon

position:3817325:-1
position: 3817325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3815974-3816402:-1:exon

position:3815974:-1
position: 3815974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3816402:-1
position: 3816402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3815621-3815879:-1:exon

position:3815621:-1
position: 3815621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3815879:-1
position: 3815879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3811707-3812923:-1:exon

position:3811707:-1
position: 3811707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3812923:-1
position: 3812923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3811401-3811548:-1:exon

position:3811401:-1
position: 3811401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3811548:-1
position: 3811548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3802368-3803195:-1:exon

position:3803195:-1
position: 3803195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057949
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057949
product: protein NPGR1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029268345.1
SIO_010081: LOC105057949
subclass of: SO_0000673
so part of: LOC105057949
location: complement(join(3802368..3803195,3811401..3811548,3811707..3812923,3815621..3815879,3815974..3816402,3817292..3817464))
location: region:3802368-3817464:-1
so has part: feature:3817292-3817464:-1:exon
so has part: feature:3815974-3816402:-1:exon
so has part: feature:3815621-3815879:-1:exon
so has part: feature:3811707-3812923:-1:exon
so has part: feature:3811401-3811548:-1:exon
so has part: feature:3802368-3803195:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3817292-3817464:-1:exon

position:3817292:-1
position: 3817292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3815974-3816402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3815621-3815879:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3811707-3812923:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3811401-3811548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3802368-3803195:-1:exon

LOC105057949
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057949
product: protein NPGR1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019854975.2
SIO_010081: LOC105057949
subclass of: SO_0000673
so part of: LOC105057949
location: complement(join(3802368..3803195,3811401..3811548,3811707..3812923,3815621..3815879,3815974..3816402,3817008..3817057))
location: region:3802368-3817057:-1
so has part: feature:3817008-3817057:-1:exon
so has part: feature:3815974-3816402:-1:exon
so has part: feature:3815621-3815879:-1:exon
so has part: feature:3811707-3812923:-1:exon
so has part: feature:3811401-3811548:-1:exon
so has part: feature:3802368-3803195:-1:exon

position:3817057:-1
position: 3817057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3817008-3817057:-1:exon

position:3817008:-1
position: 3817008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3815974-3816402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3815621-3815879:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3811707-3812923:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3811401-3811548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3802368-3803195:-1:exon

LOC105057949
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057949
product: protein NPGR1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_010940684.3
SIO_010081: LOC105057949
subclass of: SO_0000673
so part of: LOC105057949
location: complement(join(3802368..3803195,3811401..3811548,3811707..3812923,3815621..3815879,3815974..3816240,3816363..3816402,3816912..3817047))
location: region:3802368-3817047:-1
so has part: feature:3816912-3817047:-1:exon
so has part: feature:3816363-3816402:-1:exon
so has part: feature:3815974-3816240:-1:exon
so has part: feature:3815621-3815879:-1:exon
so has part: feature:3811707-3812923:-1:exon
so has part: feature:3811401-3811548:-1:exon
so has part: feature:3802368-3803195:-1:exon

position:3817047:-1
position: 3817047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3816912-3817047:-1:exon

position:3816912:-1
position: 3816912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3816363-3816402:-1:exon

position:3816363:-1
position: 3816363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3815974-3816240:-1:exon

position:3816240:-1
position: 3816240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3815621-3815879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3811707-3812923:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3811401-3811548:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3802368-3803195:-1:exon

LOC105057949
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057949
product: protein NPGR1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_010940682.2
SIO_010081: LOC105057949
subclass of: SO_0000673
so part of: LOC105057949
location: complement(join(3802368..3803195,3811401..3811548,3811707..3812923,3815621..3815879,3815974..3816402,3816912..3817047))
location: region:3802368-3817047:-1
so has part: feature:3816912-3817047:-1:exon
so has part: feature:3815974-3816402:-1:exon
so has part: feature:3815621-3815879:-1:exon
so has part: feature:3811707-3812923:-1:exon
so has part: feature:3811401-3811548:-1:exon
so has part: feature:3802368-3803195:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3816912-3817047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3815974-3816402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3815621-3815879:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3811707-3812923:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3811401-3811548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3802368-3803195:-1:exon

LOC105057949
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057949
product: protein NPGR1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019854977.2
SIO_010081: LOC105057949
subclass of: SO_0000673
so part of: LOC105057949
location: complement(join(3802368..3803195,3811401..3811548,3811707..3812923,3815621..3815879,3815974..3816240,3816363..3816402,3816819..3817045))
location: region:3802368-3817045:-1
so has part: feature:3816819-3817045:-1:exon
so has part: feature:3816363-3816402:-1:exon
so has part: feature:3815974-3816240:-1:exon
so has part: feature:3815621-3815879:-1:exon
so has part: feature:3811707-3812923:-1:exon
so has part: feature:3811401-3811548:-1:exon
so has part: feature:3802368-3803195:-1:exon

position:3817045:-1
position: 3817045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3816819-3817045:-1:exon

position:3816819:-1
position: 3816819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3816363-3816402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3815974-3816240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3815621-3815879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3811707-3812923:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3811401-3811548:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3802368-3803195:-1:exon

LOC105057949
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057949
product: protein NPGR1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019854972.2
SIO_010081: LOC105057949
subclass of: SO_0000673
so part of: LOC105057949
location: complement(join(3802368..3803195,3811401..3811548,3811707..3812923,3815621..3815879,3815974..3816402,3816819..3817045))
location: region:3802368-3817045:-1
so has part: feature:3816819-3817045:-1:exon
so has part: feature:3815974-3816402:-1:exon
so has part: feature:3815621-3815879:-1:exon
so has part: feature:3811707-3812923:-1:exon
so has part: feature:3811401-3811548:-1:exon
so has part: feature:3802368-3803195:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3816819-3817045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3815974-3816402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3815621-3815879:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3811707-3812923:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3811401-3811548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3802368-3803195:-1:exon

LOC105057949
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057949
product: protein NPGR1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_019854973.2
SIO_010081: LOC105057949
subclass of: SO_0000673
so part of: LOC105057949
location: complement(join(3802368..3803195,3811401..3811548,3811707..3812923,3815621..3815879,3815974..3816402,3816656..3816760))
location: region:3802368-3816760:-1
so has part: feature:3816656-3816760:-1:exon
so has part: feature:3815974-3816402:-1:exon
so has part: feature:3815621-3815879:-1:exon
so has part: feature:3811707-3812923:-1:exon
so has part: feature:3811401-3811548:-1:exon
so has part: feature:3802368-3803195:-1:exon

position:3816760:-1
position: 3816760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3816656-3816760:-1:exon

position:3816656:-1
position: 3816656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3815974-3816402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3815621-3815879:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3811707-3812923:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3811401-3811548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3802368-3803195:-1:exon

LOC105057949
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057949
product: protein NPGR1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_010940683.3
SIO_010081: LOC105057949
subclass of: SO_0000673
so part of: LOC105057949
location: complement(join(3802368..3803195,3811401..3811548,3811707..3812923,3815621..3815879,3815974..3816402,3816517..3816612))
location: region:3802368-3816612:-1
so has part: feature:3816517-3816612:-1:exon
so has part: feature:3815974-3816402:-1:exon
so has part: feature:3815621-3815879:-1:exon
so has part: feature:3811707-3812923:-1:exon
so has part: feature:3811401-3811548:-1:exon
so has part: feature:3802368-3803195:-1:exon

position:3816612:-1
position: 3816612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3816517-3816612:-1:exon

position:3816517:-1
position: 3816517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3815974-3816402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3815621-3815879:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3811707-3812923:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3811401-3811548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3802368-3803195:-1:exon

LOC105057949
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NPGR1
translation: MLCTCSGQQFQLEENEMPQSPESLATRDFSVSGLSSKTGDWDSKFDDSQVDDVESTLKETLSLNYEEARALLGRLEYQRGNCDAALQVFQGIDIRGLRPRMIKAIAERTQHRKNRPKGENLQVNLMSMHSVSLLLEAIFLKSKSLEQLGRHKDAALECKNILDIIESAWPDGMPEGVRGESKLKEMFHKALELLPKLWKQAGFLEEAISAYRRALVRHWSLDLKRWASLQKDLATVLLYGGAEVPLPQQFQQVWGHMTPTSNIEEAILLLLILMRKVAFQEINWDAEIMDHLIYALSLSGQFELLAGHVEQVLPGIYSRGERWYLLALCYSAAGLDDVALNILKKGLGHSERKHKPHLPSLLLGAKLCYKNPYHACEGTNFAMKAIEFTNNQEKHLRGVASHLLGVYYGYCAQSSISDSQRLRLQSESLKSLHHAATIEKDDPEVIYSLGRENAIQRNLNTAVESAIKYLDMVGGSSVSGWKLLALVVSAEQNFKDAEAIVDLAIDETGKVDHLDFLRLKALLQVAQEQPRNAIDTYRILLAMIQAQKELKSWSTSSEGKAVKDLEMEAWVDLSFIYTKLESWNDSYVCLEKAKSVEIFSPKCWHATGMLLEAQSLHVDALVAFSVALSIEPDYVPSMVSIAAVLRMFGGKSLSLARSFLMNALRLEPTNHNAWLNLGYISKAEGSLHQAADCFQAAYELRQSSPVQNFTQTLSNCHI
SIO_010081: LOC105057949
subclass of: SO_0000673
so part of: LOC105057949
location: complement(join(3802861..3803195,3811401..3811548,3811707..3812923,3815621..3815879,3815974..3816171))
location: region:3802861-3816171:-1
so has part: feature:3815974-3816171:-1:exon
so has part: feature:3815621-3815879:-1:exon
so has part: feature:3811707-3812923:-1:exon
so has part: feature:3811401-3811548:-1:exon
so has part: feature:3802861-3803195:-1:exon

XP_019710531.1
type: Protein
SIO_000068: ncbiprotein

position:3802861:-1
position: 3802861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3816171:-1
position: 3816171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3815974-3816171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3815621-3815879:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3811707-3812923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3811401-3811548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3802861-3803195:-1:exon

LOC105057949
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NPGR1
translation: MLCTCSGQQFQLEENEMPQSPESLATRDFSVSGLSSKTGDWDSKFDDSQVDDVESTLKETLSLNYEEARALLGRLEYQRGNCDAALQVFQGIDIRGLRPRMIKAIAERTQHRKNRPKGENLQVNLMSMHSVSLLLEAIFLKSKSLEQLGRHKDAALECKNILDIIESAWPDGMPEGVRGESKLKEMFHKALELLPKLWKQAGFLEEAISAYRRALVRHWSLDLKRWASLQKDLATVLLYGGAEVPLPQQFQQVWGHMTPTSNIEEAILLLLILMRKVAFQEINWDAEIMDHLIYALSLSGQFELLAGHVEQVLPGIYSRGERWYLLALCYSAAGLDDVALNILKKGLGHSERKHKPHLPSLLLGAKLCYKNPYHACEGTNFAMKAIEFTNNQEKHLRGVASHLLGVYYGYCAQSSISDSQRLRLQSESLKSLHHAATIEKDDPEVIYSLGRENAIQRNLNTAVESAIKYLDMVGGSSVSGWKLLALVVSAEQNFKDAEAIVDLAIDETGKVDHLDFLRLKALLQVAQEQPRNAIDTYRILLAMIQAQKELKSWSTSSEGKAVKDLEMEAWVDLSFIYTKLESWNDSYVCLEKAKSVEIFSPKCWHATGMLLEAQSLHVDALVAFSVALSIEPDYVPSMVSIAAVLRMFGGKSLSLARSFLMNALRLEPTNHNAWLNLGYISKAEGSLHQAADCFQAAYELRQSSPVQNFTQTLSNCHI
SIO_010081: LOC105057949
subclass of: SO_0000673
so part of: LOC105057949
location: complement(join(3802861..3803195,3811401..3811548,3811707..3812923,3815621..3815879,3815974..3816171))
location: region:3802861-3816171:-1
so has part: feature:3815974-3816171:-1:exon
so has part: feature:3815621-3815879:-1:exon
so has part: feature:3811707-3812923:-1:exon
so has part: feature:3811401-3811548:-1:exon
so has part: feature:3802861-3803195:-1:exon

XP_019710532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3815974-3816171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3815621-3815879:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3811707-3812923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3811401-3811548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3802861-3803195:-1:exon

LOC105057949
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NPGR1
translation: MLCTCSGQQFQLEENEMPQSPESLATRDFSVSGLSSKTGDWDSKFDDSQVDDVESTLKETLSLNYEEARALLGRLEYQRGNCDAALQVFQGIDIRGLRPRMIKAIAERTQHRKNRPKGENLQVNLMSMHSVSLLLEAIFLKSKSLEQLGRHKDAALECKNILDIIESAWPDGMPEGVRGESKLKEMFHKALELLPKLWKQAGFLEEAISAYRRALVRHWSLDLKRWASLQKDLATVLLYGGAEVPLPQQFQQVWGHMTPTSNIEEAILLLLILMRKVAFQEINWDAEIMDHLIYALSLSGQFELLAGHVEQVLPGIYSRGERWYLLALCYSAAGLDDVALNILKKGLGHSERKHKPHLPSLLLGAKLCYKNPYHACEGTNFAMKAIEFTNNQEKHLRGVASHLLGVYYGYCAQSSISDSQRLRLQSESLKSLHHAATIEKDDPEVIYSLGRENAIQRNLNTAVESAIKYLDMVGGSSVSGWKLLALVVSAEQNFKDAEAIVDLAIDETGKVDHLDFLRLKALLQVAQEQPRNAIDTYRILLAMIQAQKELKSWSTSSEGKAVKDLEMEAWVDLSFIYTKLESWNDSYVCLEKAKSVEIFSPKCWHATGMLLEAQSLHVDALVAFSVALSIEPDYVPSMVSIAAVLRMFGGKSLSLARSFLMNALRLEPTNHNAWLNLGYISKAEGSLHQAADCFQAAYELRQSSPVQNFTQTLSNCHI
SIO_010081: LOC105057949
subclass of: SO_0000673
so part of: LOC105057949
location: complement(join(3802861..3803195,3811401..3811548,3811707..3812923,3815621..3815879,3815974..3816171))
location: region:3802861-3816171:-1
so has part: feature:3815974-3816171:-1:exon
so has part: feature:3815621-3815879:-1:exon
so has part: feature:3811707-3812923:-1:exon
so has part: feature:3811401-3811548:-1:exon
so has part: feature:3802861-3803195:-1:exon

XP_019710534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3815974-3816171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3815621-3815879:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3811707-3812923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3811401-3811548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3802861-3803195:-1:exon

LOC105057949
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NPGR1
translation: MLCTCSGQQFQLEENEMPQSPESLATRDFSVSGLSSKTGDWDSKFDDSQVDDVESTLKETLSLNYEEARALLGRLEYQRGNCDAALQVFQGIDIRGLRPRMIKAIAERTQHRKNRPKGENLQVNLMSMHSVSLLLEAIFLKSKSLEQLGRHKDAALECKNILDIIESAWPDGMPEGVRGESKLKEMFHKALELLPKLWKQAGFLEEAISAYRRALVRHWSLDLKRWASLQKDLATVLLYGGAEVPLPQQFQQVWGHMTPTSNIEEAILLLLILMRKVAFQEINWDAEIMDHLIYALSLSGQFELLAGHVEQVLPGIYSRGERWYLLALCYSAAGLDDVALNILKKGLGHSERKHKPHLPSLLLGAKLCYKNPYHACEGTNFAMKAIEFTNNQEKHLRGVASHLLGVYYGYCAQSSISDSQRLRLQSESLKSLHHAATIEKDDPEVIYSLGRENAIQRNLNTAVESAIKYLDMVGGSSVSGWKLLALVVSAEQNFKDAEAIVDLAIDETGKVDHLDFLRLKALLQVAQEQPRNAIDTYRILLAMIQAQKELKSWSTSSEGKAVKDLEMEAWVDLSFIYTKLESWNDSYVCLEKAKSVEIFSPKCWHATGMLLEAQSLHVDALVAFSVALSIEPDYVPSMVSIAAVLRMFGGKSLSLARSFLMNALRLEPTNHNAWLNLGYISKAEGSLHQAADCFQAAYELRQSSPVQNFTQTLSNCHI
SIO_010081: LOC105057949
subclass of: SO_0000673
so part of: LOC105057949
location: complement(join(3802861..3803195,3811401..3811548,3811707..3812923,3815621..3815879,3815974..3816171))
location: region:3802861-3816171:-1
so has part: feature:3815974-3816171:-1:exon
so has part: feature:3815621-3815879:-1:exon
so has part: feature:3811707-3812923:-1:exon
so has part: feature:3811401-3811548:-1:exon
so has part: feature:3802861-3803195:-1:exon

XP_019710535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3815974-3816171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3815621-3815879:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3811707-3812923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3811401-3811548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3802861-3803195:-1:exon

LOC105057949
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NPGR1
translation: MLCTCSGQQFQLEENEMPQSPESLATRDFSVSGLSSKTGDWDSKFDDSQVDDVESTLKETLSLNYEEARALLGRLEYQRGNCDAALQVFQGIDIRGLRPRMIKAIAERTQHRKNRPKGENLQVNLMSMHSVSLLLEAIFLKSKSLEQLGRHKDAALECKNILDIIESAWPDGMPEGVRGESKLKEMFHKALELLPKLWKQAGFLEEAISAYRRALVRHWSLDLKRWASLQKDLATVLLYGGAEVPLPQQFQQVWGHMTPTSNIEEAILLLLILMRKVAFQEINWDAEIMDHLIYALSLSGQFELLAGHVEQVLPGIYSRGERWYLLALCYSAAGLDDVALNILKKGLGHSERKHKPHLPSLLLGAKLCYKNPYHACEGTNFAMKAIEFTNNQEKHLRGVASHLLGVYYGYCAQSSISDSQRLRLQSESLKSLHHAATIEKDDPEVIYSLGRENAIQRNLNTAVESAIKYLDMVGGSSVSGWKLLALVVSAEQNFKDAEAIVDLAIDETGKVDHLDFLRLKALLQVAQEQPRNAIDTYRILLAMIQAQKELKSWSTSSEGKAVKDLEMEAWVDLSFIYTKLESWNDSYVCLEKAKSVEIFSPKCWHATGMLLEAQSLHVDALVAFSVALSIEPDYVPSMVSIAAVLRMFGGKSLSLARSFLMNALRLEPTNHNAWLNLGYISKAEGSLHQAADCFQAAYELRQSSPVQNFTQTLSNCHI
SIO_010081: LOC105057949
subclass of: SO_0000673
so part of: LOC105057949
location: complement(join(3802861..3803195,3811401..3811548,3811707..3812923,3815621..3815879,3815974..3816171))
location: region:3802861-3816171:-1
so has part: feature:3815974-3816171:-1:exon
so has part: feature:3815621-3815879:-1:exon
so has part: feature:3811707-3812923:-1:exon
so has part: feature:3811401-3811548:-1:exon
so has part: feature:3802861-3803195:-1:exon

XP_019710536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3815974-3816171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3815621-3815879:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3811707-3812923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3811401-3811548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3802861-3803195:-1:exon

LOC105057949
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NPGR1
translation: MLCTCSGQQFQLEENEMPQSPESLATRDFSVSGLSSKTGDWDSKFDDSQVDDVESTLKETLSLNYEEARALLGRLEYQRGNCDAALQVFQGIDIRGLRPRMIKAIAERTQHRKNRPKGENLQVNLMSMHSVSLLLEAIFLKSKSLEQLGRHKDAALECKNILDIIESAWPDGMPEGVRGESKLKEMFHKALELLPKLWKQAGFLEEAISAYRRALVRHWSLDLKRWASLQKDLATVLLYGGAEVPLPQQFQQVWGHMTPTSNIEEAILLLLILMRKVAFQEINWDAEIMDHLIYALSLSGQFELLAGHVEQVLPGIYSRGERWYLLALCYSAAGLDDVALNILKKGLGHSERKHKPHLPSLLLGAKLCYKNPYHACEGTNFAMKAIEFTNNQEKHLRGVASHLLGVYYGYCAQSSISDSQRLRLQSESLKSLHHAATIEKDDPEVIYSLGRENAIQRNLNTAVESAIKYLDMVGGSSVSGWKLLALVVSAEQNFKDAEAIVDLAIDETGKVDHLDFLRLKALLQVAQEQPRNAIDTYRILLAMIQAQKELKSWSTSSEGKAVKDLEMEAWVDLSFIYTKLESWNDSYVCLEKAKSVEIFSPKCWHATGMLLEAQSLHVDALVAFSVALSIEPDYVPSMVSIAAVLRMFGGKSLSLARSFLMNALRLEPTNHNAWLNLGYISKAEGSLHQAADCFQAAYELRQSSPVQNFTQTLSNCHI
SIO_010081: LOC105057949
subclass of: SO_0000673
so part of: LOC105057949
location: complement(join(3802861..3803195,3811401..3811548,3811707..3812923,3815621..3815879,3815974..3816171))
location: region:3802861-3816171:-1
so has part: feature:3815974-3816171:-1:exon
so has part: feature:3815621-3815879:-1:exon
so has part: feature:3811707-3812923:-1:exon
so has part: feature:3811401-3811548:-1:exon
so has part: feature:3802861-3803195:-1:exon

XP_029124178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3815974-3816171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3815621-3815879:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3811707-3812923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3811401-3811548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3802861-3803195:-1:exon

LOC105057949
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NPGR1
translation: MLCTCSGQQFQLEENEMPQSPESLATRDFSVSGLSSKTGDWDSKFDDSQVDDVESTLKETLSLNYEEARALLGRLEYQRGNCDAALQVFQGIDIRGLRPRMIKAIAERTQHRKNRPKGENLQVNLMSMHSVSLLLEAIFLKSKSLEQLGRHKDAALECKNILDIIESAWPDGMPEGVRGESKLKEMFHKALELLPKLWKQAGFLEEAISAYRRALVRHWSLDLKRWASLQKDLATVLLYGGAEVPLPQQFQQVWGHMTPTSNIEEAILLLLILMRKVAFQEINWDAEIMDHLIYALSLSGQFELLAGHVEQVLPGIYSRGERWYLLALCYSAAGLDDVALNILKKGLGHSERKHKPHLPSLLLGAKLCYKNPYHACEGTNFAMKAIEFTNNQEKHLRGVASHLLGVYYGYCAQSSISDSQRLRLQSESLKSLHHAATIEKDDPEVIYSLGRENAIQRNLNTAVESAIKYLDMVGGSSVSGWKLLALVVSAEQNFKDAEAIVDLAIDETGKVDHLDFLRLKALLQVAQEQPRNAIDTYRILLAMIQAQKELKSWSTSSEGKAVKDLEMEAWVDLSFIYTKLESWNDSYVCLEKAKSVEIFSPKCWHATGMLLEAQSLHVDALVAFSVALSIEPDYVPSMVSIAAVLRMFGGKSLSLARSFLMNALRLEPTNHNAWLNLGYISKAEGSLHQAADCFQAAYELRQSSPVQNFTQTLSNCHI
SIO_010081: LOC105057949
subclass of: SO_0000673
so part of: LOC105057949
location: complement(join(3802861..3803195,3811401..3811548,3811707..3812923,3815621..3815879,3815974..3816171))
location: region:3802861-3816171:-1
so has part: feature:3815974-3816171:-1:exon
so has part: feature:3815621-3815879:-1:exon
so has part: feature:3811707-3812923:-1:exon
so has part: feature:3811401-3811548:-1:exon
so has part: feature:3802861-3803195:-1:exon

XP_010938984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3815974-3816171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3815621-3815879:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3811707-3812923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3811401-3811548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3802861-3803195:-1:exon

LOC105057949
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NPGR1
translation: MLCTCSGQQFQLEENEMPQSPESLATRDFSVSGLSSKTGDWDSKFDDSQVDDVESTLKETLSLNYEEARALLGRLEYQRGNCDAALQVFQGIDIRGLRPRMIKAIAERTQHRKNRPKGENLQVNLMSMHSVSLLLEAIFLKSKSLEQLGRHKDAALECKNILDIIESAWPDGMPEGVRGESKLKEMFHKALELLPKLWKQAGFLEEAISAYRRALVRHWSLDLKRWASLQKDLATVLLYGGAEVPLPQQFQQVWGHMTPTSNIEEAILLLLILMRKVAFQEINWDAEIMDHLIYALSLSGQFELLAGHVEQVLPGIYSRGERWYLLALCYSAAGLDDVALNILKKGLGHSERKHKPHLPSLLLGAKLCYKNPYHACEGTNFAMKAIEFTNNQEKHLRGVASHLLGVYYGYCAQSSISDSQRLRLQSESLKSLHHAATIEKDDPEVIYSLGRENAIQRNLNTAVESAIKYLDMVGGSSVSGWKLLALVVSAEQNFKDAEAIVDLAIDETGKVDHLDFLRLKALLQVAQEQPRNAIDTYRILLAMIQAQKELKSWSTSSEGKAVKDLEMEAWVDLSFIYTKLESWNDSYVCLEKAKSVEIFSPKCWHATGMLLEAQSLHVDALVAFSVALSIEPDYVPSMVSIAAVLRMFGGKSLSLARSFLMNALRLEPTNHNAWLNLGYISKAEGSLHQAADCFQAAYELRQSSPVQNFTQTLSNCHI
SIO_010081: LOC105057949
subclass of: SO_0000673
so part of: LOC105057949
location: complement(join(3802861..3803195,3811401..3811548,3811707..3812923,3815621..3815879,3815974..3816171))
location: region:3802861-3816171:-1
so has part: feature:3815974-3816171:-1:exon
so has part: feature:3815621-3815879:-1:exon
so has part: feature:3811707-3812923:-1:exon
so has part: feature:3811401-3811548:-1:exon
so has part: feature:3802861-3803195:-1:exon

XP_010938985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3815974-3816171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3815621-3815879:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3811707-3812923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3811401-3811548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3802861-3803195:-1:exon

LOC105057949
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NPGR1
translation: MLCTCSGQQFQLEENEMPQSPESLATRDFSVSGLSSKTGDWDSKFDDSQVDDVESTLKETLSLNYEEARALLGRLEYQRGNCDAALQVFQGIDIRGLRPRMIKAIAERTQHRKNRPKGENLQVNLMSMHSVSLLLEAIFLKSKSLEQLGRHKDAALECKNILDIIESAWPDGMPEGVRGESKLKEMFHKALELLPKLWKQAGFLEEAISAYRRALVRHWSLDLKRWASLQKDLATVLLYGGAEVPLPQQFQQVWGHMTPTSNIEEAILLLLILMRKVAFQEINWDAEIMDHLIYALSLSGQFELLAGHVEQVLPGIYSRGERWYLLALCYSAAGLDDVALNILKKGLGHSERKHKPHLPSLLLGAKLCYKNPYHACEGTNFAMKAIEFTNNQEKHLRGVASHLLGVYYGYCAQSSISDSQRLRLQSESLKSLHHAATIEKDDPEVIYSLGRENAIQRNLNTAVESAIKYLDMVGGSSVSGWKLLALVVSAEQNFKDAEAIVDLAIDETGKVDHLDFLRLKALLQVAQEQPRNAIDTYRILLAMIQAQKELKSWSTSSEGKAVKDLEMEAWVDLSFIYTKLESWNDSYVCLEKAKSVEIFSPKCWHATGMLLEAQSLHVDALVAFSVALSIEPDYVPSMVSIAAVLRMFGGKSLSLARSFLMNALRLEPTNHNAWLNLGYISKAEGSLHQAADCFQAAYELRQSSPVQNFTQTLSNCHI
SIO_010081: LOC105057949
subclass of: SO_0000673
so part of: LOC105057949
location: complement(join(3802861..3803195,3811401..3811548,3811707..3812923,3815621..3815879,3815974..3816171))
location: region:3802861-3816171:-1
so has part: feature:3815974-3816171:-1:exon
so has part: feature:3815621-3815879:-1:exon
so has part: feature:3811707-3812923:-1:exon
so has part: feature:3811401-3811548:-1:exon
so has part: feature:3802861-3803195:-1:exon

XP_010938986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3815974-3816171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3815621-3815879:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3811707-3812923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3811401-3811548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3802861-3803195:-1:exon

LOC105057987
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057987
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3954506..3955790
location: region:3954506-3955790:1
so has part: feature:3954506-3955790:1:exon
subclass of: SO_0000010

105057987
type: Gene
SIO_000068: ncbigene

position:3954506:1
position: 3954506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3955790:1
position: 3955790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3954506-3955790:1:exon

LOC105057987
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057987
product: F-box protein At5g49610-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940739.2
SIO_010081: LOC105057987
subclass of: SO_0000673
so part of: LOC105057987
location: 3954506..3955790
location: region:3954506-3955790:1
so has part: feature:3954506-3955790:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3954506-3955790:1:exon

LOC105057987
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057987
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box protein At5g49610-like
translation: MVRCAAKLTDDLVAEILSRLPTKSFFRFQCISKSWLALSSDPYYQNKFPRAASGLFFNVPSGSAPIHRSRRGIQYICLSKNDGDLAIDTALSFLPNIWNMEVLSSCNGLLLCRSWVAHSRGLTPCGVKAQSIYVCNPATSEWVIVPKAKDTYSYGYLALGFDPRISRHYHVLRFDFYGRFVIFSSKTNEWVVSQVTDAREYHKPEATFCHGIFHVTNGLNQVAGVDPEGKFCYKIELPESDGIKYLGHSGAYLRYMLQCKDEIKVWMLTDCYHGEWVLKHWINIRVMLQKYGIPVTQIIHILEFHPDVDIVFLQIQQKIFSYHLNCDRLGEVGDLYHIYGRGCFVYSACLSKGFGDEVA
SIO_010081: LOC105057987
subclass of: SO_0000673
so part of: LOC105057987
location: 3954517..3955596
location: region:3954517-3955596:1
so has part: feature:3954517-3955596:1:exon

XP_010939041.1
type: Protein
SIO_000068: ncbiprotein

position:3954517:1
position: 3954517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3955596:1
position: 3955596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3954517-3955596:1:exon

LOC105057988
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057988
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3961399..3962862
location: region:3961399-3962862:1
so has part: feature:3961399-3962862:1:exon
subclass of: SO_0000010

105057988
type: Gene
SIO_000068: ncbigene

position:3961399:1
position: 3961399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3962862:1
position: 3962862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3961399-3962862:1:exon

LOC105057988
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057988
product: F-box protein At5g49610-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940740.3
SIO_010081: LOC105057988
subclass of: SO_0000673
so part of: LOC105057988
location: 3961399..3962862
location: region:3961399-3962862:1
so has part: feature:3961399-3962862:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3961399-3962862:1:exon

LOC105057988
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057988
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box protein At5g49610-like
translation: MVRCVSKLTDDLVADILSRLPTKSFFRFQCMSKSWLALSSDPYYQNKFPRAASGLFLNVPSGGSAPIHRSRRGIQYISLSNDDDDLAIDTALSFLPNIWNMEVLSSCNGLLLCRSWVAHSWGLTSYGVKAQSIYVCNPATSEWVMVPKANDTYYDQYLALGFDPRISRHYHVLCFDFHERFVIFSSKTNECVVSEVSDAKKYHKPEATFWHGIFHVTNGLNQVLGVDPEGMFCCKIELPESDGMQYLGHSGGYLCYMLQCKDEIKVWMLTDYCHGEWLLKHWINIRDMLQNYGIPETQNIRILEFHPDVDVVFLRIQQKIFSYQLNCGRLEEVGDLYHIYGRRCFVYSPRLLKGFGDEDA
SIO_010081: LOC105057988
subclass of: SO_0000673
so part of: LOC105057988
location: 3961589..3962671
location: region:3961589-3962671:1
so has part: feature:3961589-3962671:1:exon

XP_010939042.1
type: Protein
SIO_000068: ncbiprotein

position:3961589:1
position: 3961589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3962671:1
position: 3962671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3961589-3962671:1:exon

LOC114914841
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC114914841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3964672..3965703
location: region:3964672-3965703:1
so has part: feature:3964672-3965703:1:exon

114914841
type: Gene
SIO_000068: ncbigene

position:3964672:1
position: 3964672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3965703:1
position: 3965703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3964672-3965703:1:exon

LOC114914841
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC114914841
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC114914841
subclass of: SO_0000673
so part of: LOC114914841
location: 3964672..3965703
location: region:3964672-3965703:1
so has part: feature:3964672-3965703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3964672-3965703:1:exon

LOC105057989
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057989
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4055100..4056492
location: region:4055100-4056492:1
so has part: feature:4055100-4056492:1:exon
subclass of: SO_0000010

105057989
type: Gene
SIO_000068: ncbigene

position:4055100:1
position: 4055100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4056492:1
position: 4056492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4055100-4056492:1:exon

LOC105057989
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057989
product: F-box protein At5g49610-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940741.2
SIO_010081: LOC105057989
subclass of: SO_0000673
so part of: LOC105057989
location: 4055100..4056492
location: region:4055100-4056492:1
so has part: feature:4055100-4056492:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4055100-4056492:1:exon

LOC105057989
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057989
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box protein At5g49610-like
translation: MVRCVAKLTDDLVAEILSRLPTRSFFRFQCISKSWLALSSDPCYQNKFPRAASGLFFNVPDGGSAPIHRARRGIQYISLSNNDDDLAIDTTLNFLPNICNMEVLSSCNGLLLCRSWVAQSWGLTPCGVKAQSIYVCNPATSEWVIVPKANDTYNYHYLALGFDPRLSRHYHVLCFDFYKILRFMIFSSETNEWVVSEVFDGKNYHEPQATFFHGIFHFTNGLNQVLGVDPEGKICRRIELPESDGIECLGLSGGYLHYMLQSKDEIKVWMLKDYSHVEWVLKSCINIRAMLQNHGIFETQNVHGISETQNIHILEFHPDVDVVFLRIKQKIFSYHLNSGRLEEVGDLSYIYGPGCAVYSPRLSKGFGDEVA
SIO_010081: LOC105057989
subclass of: SO_0000673
so part of: LOC105057989
location: 4055130..4056245
location: region:4055130-4056245:1
so has part: feature:4055130-4056245:1:exon

XP_010939043.1
type: Protein
SIO_000068: ncbiprotein

position:4055130:1
position: 4055130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4056245:1
position: 4056245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4055130-4056245:1:exon

LOC114914845
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC114914845
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4163255..4163360)
location: region:4163255-4163360:-1
so has part: feature:4163255-4163360:-1:exon
subclass of: SO_0000578

114914845
type: Gene
SIO_000068: ncbigene

position:4163255:-1
position: 4163255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4163360:-1
position: 4163360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4163255-4163360:-1:exon

LOC114914845
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51953
nc RNA class: snoRNA
gene: LOC114914845
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003802704.1
SIO_010081: LOC114914845
subclass of: SO_0000673
so part of: LOC114914845
location: complement(4163255..4163360)
location: region:4163255-4163360:-1
so has part: feature:4163255-4163360:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4163255-4163360:-1:exon

LOC105057990
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057990
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4223134..4224361
location: region:4223134-4224361:1
so has part: feature:4223134-4224361:1:exon
subclass of: SO_0000010

105057990
type: Gene
SIO_000068: ncbigene

position:4223134:1
position: 4223134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4224361:1
position: 4224361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4223134-4224361:1:exon

LOC105057990
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057990
product: putative F-box/kelch-repeat protein At3g17570
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940742.2
SIO_010081: LOC105057990
subclass of: SO_0000673
so part of: LOC105057990
location: 4223134..4224361
location: region:4223134-4224361:1
so has part: feature:4223134-4224361:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4223134-4224361:1:exon

LOC105057990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057990
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative F-box/kelch-repeat protein At3g17570
translation: MVRRVAKLTDDLVAEILSHLPTKSFFRFQCVSKSWFALSSDPCYHNKFPRAPCGVFINVPVGRFGPPHGGRIGVQYISLSNNGDDLVIDTALSFLRNIHNMEVISSCNGLLLCRSWVPQGGRELRTFCRSWAYVCNPATREWVMVPKGNDRYRFQYLALGFDPRISRHYHVLRVDFQEIPRFMIFSTKTNEWVVSEVSDAKEYHNPQATFFHEIFYATNGLNQVLGIDLEGRVCRRIELPVSDGIECLGHSGGYLHYMLQGKDEIKVWMLTDYCHVEWVLKHCISIRAMLQKHGIPETKSIRILEFHPNVDVVFLLINPKIFSYHLSGGRLEEVYSLHHWYSRGCVVYSPRLLKGFGNEVA
SIO_010081: LOC105057990
subclass of: SO_0000673
so part of: LOC105057990
location: 4223173..4224258
location: region:4223173-4224258:1
so has part: feature:4223173-4224258:1:exon

XP_010939044.1
type: Protein
SIO_000068: ncbiprotein

position:4223173:1
position: 4223173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4224258:1
position: 4224258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4223173-4224258:1:exon

LOC105057991
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4327183..4328361
location: region:4327183-4328361:1
so has part: feature:4327183-4328361:1:exon
subclass of: SO_0000010

105057991
type: Gene
SIO_000068: ncbigene

position:4327183:1
position: 4327183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4328361:1
position: 4328361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4327183-4328361:1:exon

LOC105057991
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057991
product: F-box protein At5g49610-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940743.1
SIO_010081: LOC105057991
subclass of: SO_0000673
so part of: LOC105057991
location: 4327183..4328361
location: region:4327183-4328361:1
so has part: feature:4327183-4328361:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4327183-4328361:1:exon

LOC105057991
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box protein At5g49610-like
translation: MVRCVDKLTDDLVAEILFRLPIKSFLRFQCVSKSWYALSSDPYYHSKFRRAASGLFFSVPDGGAAPIYRARRGIQYISLSNNNDDLAINTALNFLPNLCNMEVISSCNGLLLCRSWVARSCSMSLNPYGVEDQSLYVCNPATREWVVVPEANDRYGYQYLALGFDPCISNHYHVLCFDFHKILRFMMFSSQTNEWVVSEVSDAKKYHEPQATFFNGIFHVTYGLNQVLGIDLEGKFCHRIELPESDGIECLRHSGGYLHYMLQSKDEIKVWMLTDYRQEEWVLKHWINIGAMLQKHGIPETKNIRILEFDPDVDVFFLRLEHKIFSYHIKQGGLEQVGALYYVYGPRRFVYSPCLSKRFGLRCFVYSPSLSKGFGDCNRKNEKKKGFGDEDA
SIO_010081: LOC105057991
subclass of: SO_0000673
so part of: LOC105057991
location: 4327183..4328361
location: region:4327183-4328361:1
so has part: feature:4327183-4328361:1:exon

XP_010939045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4327183-4328361:1:exon

LOC114914835
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC114914835
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4332429..4333512
location: region:4332429-4333512:1
so has part: feature:4332429-4333512:1:exon

114914835
type: Gene
SIO_000068: ncbigene

position:4332429:1
position: 4332429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4333512:1
position: 4333512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4332429-4333512:1:exon

LOC114914835
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC114914835
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 57% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114914835
subclass of: SO_0000673
so part of: LOC114914835
location: 4332429..4333512
location: region:4332429-4333512:1
so has part: feature:4332429-4333512:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4332429-4333512:1:exon

LOC105057950
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057950
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4459264..4460133
location: region:4459264-4460133:1
so has part: feature:4459264-4460133:1:exon
subclass of: SO_0000010

105057950
type: Gene
SIO_000068: ncbigene

position:4459264:1
position: 4459264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4460133:1
position: 4460133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4459264-4460133:1:exon

LOC105057950
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057950
product: auxin-induced in root cultures protein 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940685.2
SIO_010081: LOC105057950
subclass of: SO_0000673
so part of: LOC105057950
location: 4459264..4460133
location: region:4459264-4460133:1
so has part: feature:4459264-4460133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4459264-4460133:1:exon

LOC105057950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057950
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: auxin-induced in root cultures protein 12
translation: MAAAFVLLSMAIAAVCFLPPPVAAHLCESNDVGSNRVFANCSDLPHLSASLHWTYNSSAGALSIGFAAQPAKQGGWVAWAINPTGTGMLGSQTLAAFQGADGKMVVKTYNISTFKAVKESKIAFETADLAAEYVNGTMWIFGTVMVGNDVKTVNQVWQVGPSVTKGVPDKHDIYVDNLHAKGTLTLAQAVSPAPAPSQSPPESSTGEMNASNLLYFFMFLLFVF
SIO_010081: LOC105057950
subclass of: SO_0000673
so part of: LOC105057950
location: 4459345..4460019
location: region:4459345-4460019:1
so has part: feature:4459345-4460019:1:exon

XP_010938987.1
type: Protein
SIO_000068: ncbiprotein

position:4459345:1
position: 4459345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4460019:1
position: 4460019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4459345-4460019:1:exon

LOC109506674
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC109506674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4475530..4477486
location: region:4475530-4477486:1
so has part: feature:4475530-4477486:1:exon
subclass of: SO_0000010

109506674
type: Gene
SIO_000068: ncbigene

position:4475530:1
position: 4475530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4477486:1
position: 4477486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4475530-4477486:1:exon

LOC109506674
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC109506674
product: uncharacterized LOC109506674, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029268573.1
SIO_010081: LOC109506674
subclass of: SO_0000673
so part of: LOC109506674
location: join(4475530..4475853,4475983..4477486)
location: region:4475530-4477486:1
so has part: feature:4475530-4475853:1:exon
so has part: feature:4475983-4477486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4475530-4475853:1:exon

position:4475853:1
position: 4475853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4475983-4477486:1:exon

position:4475983:1
position: 4475983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109506674
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC109506674
product: uncharacterized LOC109506674, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002166151.2
SIO_010081: LOC109506674
so part of: LOC109506674
location: join(4475530..4475853,4475983..4476525,4476659..4477486)
location: region:4475530-4477486:1
so has part: feature:4475530-4475853:1:exon
so has part: feature:4475983-4476525:1:exon
so has part: feature:4476659-4477486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4475530-4475853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4475983-4476525:1:exon

position:4476525:1
position: 4476525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4476659-4477486:1:exon

position:4476659:1
position: 4476659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109506674
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC109506674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109506674
translation: MVVSLFLRSLGPSNKVEIVEQEGFECVPSSHRGRVSGLVIHKRKSSNKTSPRRRSKDGLGPSPAFKTPSKPRPTQVVTKNAFAGLDSSKVQYLKIYGPSLDILPLFILLMPVGSPEEAPKGTPKMQAVACRESKVVLEVPITSTLPATFEPPLEASVDVARPSLPSSFGGPNFIKRVRLVHQKLSIFQPEWLITMGKSMLNT
SIO_010081: LOC109506674
subclass of: SO_0000673
so part of: LOC109506674
location: join(4475728..4475853,4475983..4476465)
location: region:4475728-4476465:1
so has part: feature:4475728-4475853:1:exon
so has part: feature:4475983-4476465:1:exon

XP_029124406.1
type: Protein
SIO_000068: ncbiprotein

position:4475728:1
position: 4475728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4476465:1
position: 4476465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4475728-4475853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4475983-4476465:1:exon

LOC105057951
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4510855..4514449)
location: region:4510855-4514449:-1
so has part: feature:4510855-4514449:-1:exon
subclass of: SO_0000010

105057951
type: Gene
SIO_000068: ncbigene

position:4510855:-1
position: 4510855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4514449:-1
position: 4514449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4510855-4514449:-1:exon

LOC105057951
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057951
product: 40S ribosomal protein S3a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_010940686.3
SIO_010081: LOC105057951
subclass of: SO_0000673
so part of: LOC105057951
location: complement(join(4510855..4511192,4511343..4511543,4511663..4511848,4511922..4512059,4513997..4514102,4514198..4514245,4514339..4514449))
location: region:4510855-4514449:-1
so has part: feature:4514339-4514449:-1:exon
so has part: feature:4514198-4514245:-1:exon
so has part: feature:4513997-4514102:-1:exon
so has part: feature:4511922-4512059:-1:exon
so has part: feature:4511663-4511848:-1:exon
so has part: feature:4511343-4511543:-1:exon
so has part: feature:4510855-4511192:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4514339-4514449:-1:exon

position:4514339:-1
position: 4514339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4514198-4514245:-1:exon

position:4514198:-1
position: 4514198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4514245:-1
position: 4514245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4513997-4514102:-1:exon

position:4513997:-1
position: 4513997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4514102:-1
position: 4514102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4511922-4512059:-1:exon

position:4511922:-1
position: 4511922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4512059:-1
position: 4512059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4511663-4511848:-1:exon

position:4511663:-1
position: 4511663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4511848:-1
position: 4511848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4511343-4511543:-1:exon

position:4511343:-1
position: 4511343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4511543:-1
position: 4511543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4510855-4511192:-1:exon

position:4511192:-1
position: 4511192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057951
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S3a
translation: MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVRNIGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQTSQIRQIRRKMREIMVNQATSCDLKDLVQKFIPEVIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDVGVKIDRPADDVQMEGEPEVVGA
SIO_010081: LOC105057951
subclass of: SO_0000673
so part of: LOC105057951
location: complement(join(4511097..4511192,4511343..4511543,4511663..4511848,4511922..4512059,4513997..4514102,4514198..4514245,4514339..4514349))
location: region:4511097-4514349:-1
so has part: feature:4514339-4514349:-1:exon
so has part: feature:4514198-4514245:-1:exon
so has part: feature:4513997-4514102:-1:exon
so has part: feature:4511922-4512059:-1:exon
so has part: feature:4511663-4511848:-1:exon
so has part: feature:4511343-4511543:-1:exon
so has part: feature:4511097-4511192:-1:exon

XP_010938988.1
type: Protein
SIO_000068: ncbiprotein

position:4511097:-1
position: 4511097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4514349:-1
position: 4514349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4514339-4514349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4514198-4514245:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4513997-4514102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4511922-4512059:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4511663-4511848:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4511343-4511543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4511097-4511192:-1:exon

LOC105057954
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4595371..4611292
location: region:4595371-4611292:1
so has part: feature:4595371-4611292:1:exon
subclass of: SO_0000010

105057954
type: Gene
SIO_000068: ncbigene

position:4595371:1
position: 4595371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4611292:1
position: 4611292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4595371-4611292:1:exon

LOC105057954
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057954
product: pentatricopeptide repeat-containing protein At5g67570, chloroplastic, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_010940688.3
SIO_010081: LOC105057954
subclass of: SO_0000673
so part of: LOC105057954
location: join(4595371..4596101,4597013..4597204,4597348..4597429,4597578..4597769,4597899..4597982,4603055..4603148,4603237..4603394,4608212..4608646,4610221..4611292)
location: region:4595371-4611292:1
so has part: feature:4595371-4596101:1:exon
so has part: feature:4597013-4597204:1:exon
so has part: feature:4597348-4597429:1:exon
so has part: feature:4597578-4597769:1:exon
so has part: feature:4597899-4597982:1:exon
so has part: feature:4603055-4603148:1:exon
so has part: feature:4603237-4603394:1:exon
so has part: feature:4608212-4608646:1:exon
so has part: feature:4610221-4611292:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4595371-4596101:1:exon

position:4596101:1
position: 4596101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4597013-4597204:1:exon

position:4597013:1
position: 4597013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4597204:1
position: 4597204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4597348-4597429:1:exon

position:4597348:1
position: 4597348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4597429:1
position: 4597429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4597578-4597769:1:exon

position:4597578:1
position: 4597578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4597769:1
position: 4597769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4597899-4597982:1:exon

position:4597899:1
position: 4597899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4597982:1
position: 4597982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4603055-4603148:1:exon

position:4603055:1
position: 4603055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4603148:1
position: 4603148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4603237-4603394:1:exon

position:4603237:1
position: 4603237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4603394:1
position: 4603394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4608212-4608646:1:exon

position:4608212:1
position: 4608212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4608646:1
position: 4608646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4610221-4611292:1:exon

position:4610221:1
position: 4610221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057954
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057954
product: pentatricopeptide repeat-containing protein At5g67570, chloroplastic, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_010940687.3
SIO_010081: LOC105057954
subclass of: SO_0000673
so part of: LOC105057954
location: join(4595372..4596101,4597013..4597204,4597348..4597429,4597578..4597769,4597869..4597982,4603055..4603148,4603237..4603394,4608212..4608646,4610221..4611292)
location: region:4595372-4611292:1
so has part: feature:4595372-4596101:1:exon
so has part: feature:4597013-4597204:1:exon
so has part: feature:4597348-4597429:1:exon
so has part: feature:4597578-4597769:1:exon
so has part: feature:4597869-4597982:1:exon
so has part: feature:4603055-4603148:1:exon
so has part: feature:4603237-4603394:1:exon
so has part: feature:4608212-4608646:1:exon
so has part: feature:4610221-4611292:1:exon

position:4595372:1
position: 4595372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4595372-4596101:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4597013-4597204:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4597348-4597429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4597578-4597769:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4597869-4597982:1:exon

position:4597869:1
position: 4597869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4603055-4603148:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4603237-4603394:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4608212-4608646:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4610221-4611292:1:exon

LOC105057954
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At5g67570, chloroplastic isoform X1
translation: MEASFASPSALIPTLLPRSEGKKPFEPNTDAIKQRLLRKGVFPTPKILHALHKKEIQKSLRRAKKEALKDESAPLSASQRQALEEDAHFRTVSAEYRAVREELRRRNEKALALAGKPWERLDEVDLRGLMSLKEECGEGRLKGEHLEELKEMLAERNGERFRWLLDDDVEEVAGVVDERERKLVPSRQNLGDEEKIQLLIKRLSRTELSIQDWKFSRLMKQSGLFFTEMCLLEILEGLGALGNWRQALFVVEWVYNQRHYKHRKSRFVYTKLLAVIGKARRPSEALHVFNVMREDGQIYPDMAAYHSIAVTLGQAGLLNELMTIVECMRQKPSKGIKNMKRGDWDPCLEPDIVIYNAVLNACIPSHQWKGVFWVLEQIRFCGLKPIGATYGLAMEVMLRAGKHDFVHNFFKKMQKNGLPPKALTYKVLVRTFWEEGKVDEAVEAVRDMENRGVVGAASVYYELACCLCNNGRWKDAMMEVEKLKSLPLTKPLEVAFTGMILSSLDGGYINDCISIFEHMKDHCVPNIGTVNAMLKVYGHSDVFTKAKELFEATKAIVSNFKSYTGNDSSLELDAYSYSSMLEVSASAHQWEYFEYVYKEMAFCGYQLDQRKHAWLLVEASRAGKWHLLEHAFDTVLEAGEIPHVSLFTEMICQTIAQQNFKRTVNLINGMAHASLRVSEIQWLKLFQINMDRFSMDKLHDLLNHLSGCDLVQEDPVPNFLKALQSLCGMRLLKDTTVVTDTSDVSAVTPTITGNEKDDNSCDEIQAHIPGKMLMDDNGSPLWSQEDSLMSERHLDRTEGSSSISVSLQGVNNVAFSSFVGNEGKELHSVFHGYSETPITDAALESLTAHTGRPFSELPSAFEILETWKQERMKDGIFPFQR
SIO_010081: LOC105057954
subclass of: SO_0000673
so part of: LOC105057954
location: join(4595497..4596101,4597013..4597204,4597348..4597429,4597578..4597769,4597869..4597982,4603055..4603148,4603237..4603394,4608212..4608646,4610221..4610994)
location: region:4595497-4610994:1
so has part: feature:4595497-4596101:1:exon
so has part: feature:4597013-4597204:1:exon
so has part: feature:4597348-4597429:1:exon
so has part: feature:4597578-4597769:1:exon
so has part: feature:4597869-4597982:1:exon
so has part: feature:4603055-4603148:1:exon
so has part: feature:4603237-4603394:1:exon
so has part: feature:4608212-4608646:1:exon
so has part: feature:4610221-4610994:1:exon

XP_010938989.1
type: Protein
SIO_000068: ncbiprotein

position:4595497:1
position: 4595497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4610994:1
position: 4610994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4595497-4596101:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4597013-4597204:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4597348-4597429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4597578-4597769:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4597869-4597982:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4603055-4603148:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4603237-4603394:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4608212-4608646:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4610221-4610994:1:exon

LOC105057954
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At5g67570, chloroplastic isoform X2
translation: MEASFASPSALIPTLLPRSEGKKPFEPNTDAIKQRLLRKGVFPTPKILHALHKKEIQKSLRRAKKEALKDESAPLSASQRQALEEDAHFRTVSAEYRAVREELRRRNEKALALAGKPWERLDEVDLRGLMSLKEECGEGRLKGEHLEELKEMLAERNGERFRWLLDDDVEEVAGVVDERERKLVPSRQNLGDEEKIQLLIKRLSRTELSIQDWKFSRLMKQSGLFFTEMCLLEILEGLGALGNWRQALFVVEWVYNQRHYKHRKSRFVYTKLLAVIGKARRPSEALHVFNVMREDGQIYPDMAAYHSIAVTLGQAGLLNELMTIVECMRQKPSKGIKNMKRGDWDPCLEPDIVIYNAWKGVFWVLEQIRFCGLKPIGATYGLAMEVMLRAGKHDFVHNFFKKMQKNGLPPKALTYKVLVRTFWEEGKVDEAVEAVRDMENRGVVGAASVYYELACCLCNNGRWKDAMMEVEKLKSLPLTKPLEVAFTGMILSSLDGGYINDCISIFEHMKDHCVPNIGTVNAMLKVYGHSDVFTKAKELFEATKAIVSNFKSYTGNDSSLELDAYSYSSMLEVSASAHQWEYFEYVYKEMAFCGYQLDQRKHAWLLVEASRAGKWHLLEHAFDTVLEAGEIPHVSLFTEMICQTIAQQNFKRTVNLINGMAHASLRVSEIQWLKLFQINMDRFSMDKLHDLLNHLSGCDLVQEDPVPNFLKALQSLCGMRLLKDTTVVTDTSDVSAVTPTITGNEKDDNSCDEIQAHIPGKMLMDDNGSPLWSQEDSLMSERHLDRTEGSSSISVSLQGVNNVAFSSFVGNEGKELHSVFHGYSETPITDAALESLTAHTGRPFSELPSAFEILETWKQERMKDGIFPFQR
SIO_010081: LOC105057954
subclass of: SO_0000673
so part of: LOC105057954
location: join(4595497..4596101,4597013..4597204,4597348..4597429,4597578..4597769,4597899..4597982,4603055..4603148,4603237..4603394,4608212..4608646,4610221..4610994)
location: region:4595497-4610994:1
so has part: feature:4595497-4596101:1:exon
so has part: feature:4597013-4597204:1:exon
so has part: feature:4597348-4597429:1:exon
so has part: feature:4597578-4597769:1:exon
so has part: feature:4597899-4597982:1:exon
so has part: feature:4603055-4603148:1:exon
so has part: feature:4603237-4603394:1:exon
so has part: feature:4608212-4608646:1:exon
so has part: feature:4610221-4610994:1:exon

XP_010938990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4595497-4596101:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4597013-4597204:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4597348-4597429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4597578-4597769:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4597899-4597982:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4603055-4603148:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4603237-4603394:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4608212-4608646:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4610221-4610994:1:exon

LOC105057955
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4614290..4640912)
location: region:4614290-4640912:-1
so has part: feature:4614290-4640912:-1:exon
subclass of: SO_0000010

105057955
type: Gene
SIO_000068: ncbigene

position:4614290:-1
position: 4614290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4640912:-1
position: 4640912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4614290-4640912:-1:exon

LOC105057955
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057955
product: uncharacterized LOC105057955
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_010940689.3
SIO_010081: LOC105057955
subclass of: SO_0000673
so part of: LOC105057955
location: complement(join(4614290..4614672,4640157..4640204,4640327..4640429,4640676..4640912))
location: region:4614290-4640912:-1
so has part: feature:4640676-4640912:-1:exon
so has part: feature:4640327-4640429:-1:exon
so has part: feature:4640157-4640204:-1:exon
so has part: feature:4614290-4614672:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4640676-4640912:-1:exon

position:4640676:-1
position: 4640676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4640327-4640429:-1:exon

position:4640327:-1
position: 4640327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4640429:-1
position: 4640429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4640157-4640204:-1:exon

position:4640157:-1
position: 4640157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4640204:-1
position: 4640204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4614290-4614672:-1:exon

position:4614672:-1
position: 4614672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057955
translation: MAFCSCFGPSKSERLEAERIQSQEARHRAGEAAQKRQEQFEKSAAGRAASKQMAAMKQSNVSNKGEPVLKWQMG
SIO_010081: LOC105057955
subclass of: SO_0000673
so part of: LOC105057955
location: complement(join(4640190..4640204,4640327..4640429,4640676..4640782))
location: region:4640190-4640782:-1
so has part: feature:4640676-4640782:-1:exon
so has part: feature:4640327-4640429:-1:exon
so has part: feature:4640190-4640204:-1:exon

XP_010938991.1
type: Protein
SIO_000068: ncbiprotein

position:4640190:-1
position: 4640190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4640782:-1
position: 4640782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4640676-4640782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4640327-4640429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4640190-4640204:-1:exon

LOC105057956
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4687040..4688537)
location: region:4687040-4688537:-1
so has part: feature:4687040-4688537:-1:exon
subclass of: SO_0000010

105057956
type: Gene
SIO_000068: ncbigene

position:4687040:-1
position: 4687040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4688537:-1
position: 4688537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4687040-4688537:-1:exon

LOC105057956
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057956
product: uncharacterized LOC105057956
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940690.3
SIO_010081: LOC105057956
subclass of: SO_0000673
so part of: LOC105057956
location: complement(4687040..4688537)
location: region:4687040-4688537:-1
so has part: feature:4687040-4688537:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4687040-4688537:-1:exon

LOC105057956
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057956
translation: MFCGTGSFKRIDEDPWLPTSAPGSPKGSKRKANKNPYSTRGLDKFSTVLAELEARREKIMAKAGTQGVSMVRFMHSNSQEWIPIIVKLREDQKEEKTKPAVGKKPKQLEWLPSQPNSEGVKESAPLVGSVDAKEAAERKMKKCFFWGVKEGEVVPWRWRPSYYWPLGMVLILVGLVMFGRVFAICCTSIWWYLVPTMKGGSGDARRSMKKKDYRRMPNDKRSGRNLGVAPSFQAKKVGGVQEISSPRIHGNGKRG
SIO_010081: LOC105057956
subclass of: SO_0000673
so part of: LOC105057956
location: complement(4687639..4688406)
location: region:4687639-4688406:-1
so has part: feature:4687639-4688406:-1:exon

XP_010938992.1
type: Protein
SIO_000068: ncbiprotein

position:4687639:-1
position: 4687639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4688406:-1
position: 4688406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4687639-4688406:-1:exon

LOC105057957
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4821812..4824636
location: region:4821812-4824636:1
so has part: feature:4821812-4824636:1:exon
subclass of: SO_0000010

105057957
type: Gene
SIO_000068: ncbigene

position:4821812:1
position: 4821812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4824636:1
position: 4824636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4821812-4824636:1:exon

LOC105057957
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057957
product: LIM domain-containing protein WLIM1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_010940692.3
SIO_010081: LOC105057957
subclass of: SO_0000673
so part of: LOC105057957
location: join(4821812..4822239,4823200..4823296,4823377..4823420,4823766..4823855,4824221..4824636)
location: region:4821812-4824636:1
so has part: feature:4821812-4822239:1:exon
so has part: feature:4823200-4823296:1:exon
so has part: feature:4823377-4823420:1:exon
so has part: feature:4823766-4823855:1:exon
so has part: feature:4824221-4824636:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4821812-4822239:1:exon

position:4822239:1
position: 4822239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4823200-4823296:1:exon

position:4823200:1
position: 4823200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4823296:1
position: 4823296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4823377-4823420:1:exon

position:4823377:1
position: 4823377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4823420:1
position: 4823420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4823766-4823855:1:exon

position:4823766:1
position: 4823766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4823855:1
position: 4823855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4824221-4824636:1:exon

position:4824221:1
position: 4824221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057957
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain-containing protein WLIM1
translation: MAFQGTQTKCTACSKTVYLVDKLTADNRIYHKACFRCHHCQGTLKLGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPEKPVDTEKTAANRVSSQFAGTREKCFGCKKTVYPIERVTVNGTAYHKSCFKCTHGGCVISPSNYIAHEGRLYCKHHHIQLFKEKGNYSQLETDQEKMENEAPTSAEELES
SIO_010081: LOC105057957
subclass of: SO_0000673
so part of: LOC105057957
location: join(4822105..4822239,4823200..4823296,4823377..4823420,4823766..4823855,4824221..4824442)
location: region:4822105-4824442:1
so has part: feature:4822105-4822239:1:exon
so has part: feature:4823200-4823296:1:exon
so has part: feature:4823377-4823420:1:exon
so has part: feature:4823766-4823855:1:exon
so has part: feature:4824221-4824442:1:exon

XP_010938994.1
type: Protein
SIO_000068: ncbiprotein

position:4822105:1
position: 4822105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4824442:1
position: 4824442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4822105-4822239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4823200-4823296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4823377-4823420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4823766-4823855:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4824221-4824442:1:exon

LOC105057958
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4826772..4841317)
location: region:4826772-4841317:-1
so has part: feature:4826772-4841317:-1:exon
subclass of: SO_0000010

105057958
type: Gene
SIO_000068: ncbigene

position:4826772:-1
position: 4826772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4841317:-1
position: 4841317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4826772-4841317:-1:exon

LOC105057958
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057958
product: F-box protein At3g12350, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_010940694.3
SIO_010081: LOC105057958
subclass of: SO_0000673
so part of: LOC105057958
location: complement(join(4826772..4828066,4839740..4840158,4840251..4841310))
location: region:4826772-4841310:-1
so has part: feature:4840251-4841310:-1:exon
so has part: feature:4839740-4840158:-1:exon
so has part: feature:4826772-4828066:-1:exon

position:4841310:-1
position: 4841310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4840251-4841310:-1:exon

position:4840251:-1
position: 4840251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4839740-4840158:-1:exon

position:4839740:-1
position: 4839740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4840158:-1
position: 4840158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4826772-4828066:-1:exon

position:4828066:-1
position: 4828066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057958
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057958
product: F-box protein At3g12350, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029268346.1
SIO_010081: LOC105057958
subclass of: SO_0000673
so part of: LOC105057958
location: complement(join(4827874..4828066,4840251..4841317))
location: region:4827874-4841317:-1
so has part: feature:4840251-4841317:-1:exon
so has part: feature:4827874-4828066:-1:exon

position:4827874:-1
position: 4827874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4840251-4841317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4827874-4828066:-1:exon

LOC105057958
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box protein At3g12350 isoform X1
translation: MASPPPTLFSDFPEDVQLNVLSFLSPAEVSAFACTSRRFASLCSASASDSPVWHAMCERRWGSKTLLRSWASGAAATGRVPYARLYRTLDRWESFIGFWRRIGQGTPGTLPLVFFEWGPSYITGSWVSPSVEAGTYGVLKVPFLWLGLSAHGDPVSFLHPGSQFESPGEFFSSALGPSSDSDLVPVTVSFMGCNHFVVEENRSFYAEDGGGDGGVSDEVAEIASKSPPDRLMSEIYQYFANRTSPGGDKASRRHRKKEREKLGRRRLWEAEHFVKIVNYQPTPSRPLQGLWKGICEDNVLDFYLVSYDDVGGITCRRVGDAGELFSGYSPVFWTSNATFLESPFSKEEQDLYGSREHIRAVASNWSNMDREVVLRILCINSSYDLVIPDLSGSSGDPRNVEGRIWEYEDGTFGFGFLRNNFIIDLKHITLDGKKGERTLINQEISDILWMSSP
SIO_010081: LOC105057958
subclass of: SO_0000673
so part of: LOC105057958
location: complement(join(4828000..4828066,4839740..4840158,4840251..4841126))
location: region:4828000-4841126:-1
so has part: feature:4840251-4841126:-1:exon
so has part: feature:4839740-4840158:-1:exon
so has part: feature:4828000-4828066:-1:exon

XP_010938996.2
type: Protein
SIO_000068: ncbiprotein

position:4828000:-1
position: 4828000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4841126:-1
position: 4841126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4840251-4841126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4839740-4840158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4828000-4828066:-1:exon

LOC105057958
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box protein At3g12350 isoform X4
translation: MASPPPTLFSDFPEDVQLNVLSFLSPAEVSAFACTSRRFASLCSASASDSPVWHAMCERRWGSKTLLRSWASGAAATGRVPYARLYRTLDRWESFIGFWRRIGQGTPGTLPLVFFEWGPSYITGSWVSPSVEAGTYGVLKVPFLWLGLSAHGDPVSFLHPGSQFESPGEFFSSALGPSSDSDLVPVTVSFMGCNHFVVEENRSFYAEDGGGDGGVSDEVAEIASKSPPDRLMSEIYQYFANRTSPGGDKASRRHRKKEREKLGRRRLWEAEHFVKIVNYQPTPSRPLQGLWKEKGGKNFD
SIO_010081: LOC105057958
subclass of: SO_0000673
so part of: LOC105057958
location: complement(join(4828040..4828066,4840251..4841126))
location: region:4828040-4841126:-1
so has part: feature:4840251-4841126:-1:exon
so has part: feature:4828040-4828066:-1:exon

XP_029124179.1
type: Protein
SIO_000068: ncbiprotein

position:4828040:-1
position: 4828040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4840251-4841126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4828040-4828066:-1:exon

LOC105057958
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057958
product: F-box protein At3g12350, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_010940693.3
SIO_010081: LOC105057958
subclass of: SO_0000673
so part of: LOC105057958
location: complement(join(4832003..4836598,4839740..4840158,4840251..4841310))
location: region:4832003-4841310:-1
so has part: feature:4840251-4841310:-1:exon
so has part: feature:4839740-4840158:-1:exon
so has part: feature:4832003-4836598:-1:exon

position:4832003:-1
position: 4832003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4840251-4841310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4839740-4840158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4832003-4836598:-1:exon

position:4836598:-1
position: 4836598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057958
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057958
product: F-box protein At3g12350, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_019855229.2
SIO_010081: LOC105057958
subclass of: SO_0000673
so part of: LOC105057958
location: complement(join(4836451..4836598,4840251..4841317))
location: region:4836451-4841317:-1
so has part: feature:4840251-4841317:-1:exon
so has part: feature:4836451-4836598:-1:exon

position:4836451:-1
position: 4836451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4840251-4841317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4836451-4836598:-1:exon

LOC105057958
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box protein At3g12350 isoform X2
translation: MASPPPTLFSDFPEDVQLNVLSFLSPAEVSAFACTSRRFASLCSASASDSPVWHAMCERRWGSKTLLRSWASGAAATGRVPYARLYRTLDRWESFIGFWRRIGQGTPGTLPLVFFEWGPSYITGSWVSPSVEAGTYGVLKVPFLWLGLSAHGDPVSFLHPGSQFESPGEFFSSALGPSSDSDLVPVTVSFMGCNHFVVEENRSFYAEDGGGDGGVSDEVAEIASKSPPDRLMSEIYQYFANRTSPGGDKASRRHRKKEREKLGRRRLWEAEHFVKIVNYQPTPSRPLQGLWKGICEDNVLDFYLVSYDDVGGITCRRVGDAGELFSGYSPVFWTSNATFLESPFSKEEQDLYGSREHIRAVASNWSNMDREVVLRILCINSSYDLVIPDLSGSSGDPRNVEGRIWEYEDGTFGFGFLRNNFIIDLKHITLDGIRMLSLTTILEVHELL
SIO_010081: LOC105057958
subclass of: SO_0000673
so part of: LOC105057958
location: complement(join(4836547..4836598,4839740..4840158,4840251..4841126))
location: region:4836547-4841126:-1
so has part: feature:4840251-4841126:-1:exon
so has part: feature:4839740-4840158:-1:exon
so has part: feature:4836547-4836598:-1:exon

XP_010938995.1
type: Protein
SIO_000068: ncbiprotein

position:4836547:-1
position: 4836547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4840251-4841126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4839740-4840158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4836547-4836598:-1:exon

LOC105057958
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box protein At3g12350 isoform X3
translation: MASPPPTLFSDFPEDVQLNVLSFLSPAEVSAFACTSRRFASLCSASASDSPVWHAMCERRWGSKTLLRSWASGAAATGRVPYARLYRTLDRWESFIGFWRRIGQGTPGTLPLVFFEWGPSYITGSWVSPSVEAGTYGVLKVPFLWLGLSAHGDPVSFLHPGSQFESPGEFFSSALGPSSDSDLVPVTVSFMGCNHFVVEENRSFYAEDGGGDGGVSDEVAEIASKSPPDRLMSEIYQYFANRTSPGGDKASRRHRKKEREKLGRRRLWEAEHFVKIVNYQPTPSRPLQGLWKDKDAFFDNYT
SIO_010081: LOC105057958
subclass of: SO_0000673
so part of: LOC105057958
location: complement(join(4836566..4836598,4840251..4841126))
location: region:4836566-4841126:-1
so has part: feature:4840251-4841126:-1:exon
so has part: feature:4836566-4836598:-1:exon

XP_019710788.1
type: Protein
SIO_000068: ncbiprotein

position:4836566:-1
position: 4836566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4840251-4841126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4836566-4836598:-1:exon

LOC105057959
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4935708..4966035
location: region:4935708-4966035:1
so has part: feature:4935708-4966035:1:exon
subclass of: SO_0000010

105057959
type: Gene
SIO_000068: ncbigene

position:4935708:1
position: 4935708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4966035:1
position: 4966035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4935708-4966035:1:exon

LOC105057959
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057959
product: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_010940695.2
SIO_010081: LOC105057959
subclass of: SO_0000673
so part of: LOC105057959
location: join(4935708..4936035,4939679..4939767,4942694..4942823,4960156..4960185,4965791..4966035)
location: region:4935708-4966035:1
so has part: feature:4935708-4936035:1:exon
so has part: feature:4939679-4939767:1:exon
so has part: feature:4942694-4942823:1:exon
so has part: feature:4960156-4960185:1:exon
so has part: feature:4965791-4966035:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4935708-4936035:1:exon

position:4936035:1
position: 4936035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4939679-4939767:1:exon

position:4939679:1
position: 4939679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4939767:1
position: 4939767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4942694-4942823:1:exon

position:4942694:1
position: 4942694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4942823:1
position: 4942823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4960156-4960185:1:exon

position:4960156:1
position: 4960156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4960185:1
position: 4960185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4965791-4966035:1:exon

position:4965791:1
position: 4965791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057959
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
translation: MAAPLQRRSLSLARLLFFRSSHLSQSRSLASDALVERKPGEIGIISGIPQEHLRRKVMIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDAALSFDSEEAAKAFAEKHGWDYVVRKRHTPLLKLKSYADNFKWKGPPKSDEE
SIO_010081: LOC105057959
subclass of: SO_0000673
so part of: LOC105057959
location: join(4935868..4936035,4939679..4939767,4942694..4942823,4960156..4960185,4965791..4965850)
location: region:4935868-4965850:1
so has part: feature:4935868-4936035:1:exon
so has part: feature:4939679-4939767:1:exon
so has part: feature:4942694-4942823:1:exon
so has part: feature:4960156-4960185:1:exon
so has part: feature:4965791-4965850:1:exon

XP_010938997.1
type: Protein
SIO_000068: ncbiprotein

position:4935868:1
position: 4935868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4965850:1
position: 4965850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4935868-4936035:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4939679-4939767:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4942694-4942823:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4960156-4960185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4965791-4965850:1:exon

LOC114914836
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC114914836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4974847..4975718
location: region:4974847-4975718:1
so has part: feature:4974847-4975718:1:exon
subclass of: SO_0000010

114914836
type: Gene
SIO_000068: ncbigene

position:4974847:1
position: 4974847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4975718:1
position: 4975718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4974847-4975718:1:exon

LOC114914836
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC114914836
product: uncharacterized LOC114914836
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029268574.1
SIO_010081: LOC114914836
subclass of: SO_0000673
so part of: LOC114914836
location: join(4974847..4975226,4975532..4975718)
location: region:4974847-4975718:1
so has part: feature:4974847-4975226:1:exon
so has part: feature:4975532-4975718:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4974847-4975226:1:exon

position:4975226:1
position: 4975226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4975532-4975718:1:exon

position:4975532:1
position: 4975532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114914836
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC114914836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC114914836
translation: MTEKANKEIGSKKRNKKYFRCDHCKKTGHTRDRCFELIGYPPGWQSKNQVKGRGNGAEIGSQHQGGVAVNATTPLNTDRISSIPDLSPTQYQQLIFLLGQDKTQSAVNFVGPCHEEADWIG
SIO_010081: LOC114914836
subclass of: SO_0000673
so part of: LOC114914836
location: join(4974896..4975226,4975532..4975566)
location: region:4974896-4975566:1
so has part: feature:4974896-4975226:1:exon
so has part: feature:4975532-4975566:1:exon

XP_029124407.1
type: Protein
SIO_000068: ncbiprotein

position:4974896:1
position: 4974896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4975566:1
position: 4975566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4974896-4975226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4975532-4975566:1:exon

LOC105057960
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057960
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5040667..5042645)
location: region:5040667-5042645:-1
so has part: feature:5040667-5042645:-1:exon
subclass of: SO_0000010

105057960
type: Gene
SIO_000068: ncbigene

position:5040667:-1
position: 5040667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5042645:-1
position: 5042645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5040667-5042645:-1:exon

LOC105057960
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057960
product: cysteine-rich and transmembrane domain-containing protein WIH2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_010940698.2
SIO_010081: LOC105057960
subclass of: SO_0000673
so part of: LOC105057960
location: complement(join(5040667..5041135,5042138..5042327,5042411..5042645))
location: region:5040667-5042645:-1
so has part: feature:5042411-5042645:-1:exon
so has part: feature:5042138-5042327:-1:exon
so has part: feature:5040667-5041135:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5042411-5042645:-1:exon

position:5042411:-1
position: 5042411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5042138-5042327:-1:exon

position:5042138:-1
position: 5042138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5042327:-1
position: 5042327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5040667-5041135:-1:exon

position:5041135:-1
position: 5041135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057960
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich and transmembrane domain-containing protein WIH2
translation: MSYYNQQQPPVGVPPPQGYPPEGYGKEAYPPPGYPQQGYPPQGYAQGYPPQGYPQQGYPPPYAQAPPPQQQSSGPTFLEGCLAALCCCCLLDACF
SIO_010081: LOC105057960
subclass of: SO_0000673
so part of: LOC105057960
location: complement(join(5041090..5041135,5042138..5042327,5042411..5042462))
location: region:5041090-5042462:-1
so has part: feature:5042411-5042462:-1:exon
so has part: feature:5042138-5042327:-1:exon
so has part: feature:5041090-5041135:-1:exon

XP_010939000.1
type: Protein
SIO_000068: ncbiprotein

position:5041090:-1
position: 5041090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5042462:-1
position: 5042462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5042411-5042462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5042138-5042327:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5041090-5041135:-1:exon

LOC105057961
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5088917..5102693)
location: region:5088917-5102693:-1
so has part: feature:5088917-5102693:-1:exon
subclass of: SO_0000010

105057961
type: Gene
SIO_000068: ncbigene

position:5088917:-1
position: 5088917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5102693:-1
position: 5102693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5088917-5102693:-1:exon

LOC105057961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057961
product: uncharacterized LOC105057961, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_019855041.2
SIO_010081: LOC105057961
subclass of: SO_0000673
so part of: LOC105057961
location: complement(join(5088917..5089425,5089580..5089668,5091500..5091606,5091765..5091926,5098360..5098452,5098542..5098604,5101677..5101822,5101918..5102075,5102162..5102384,5102472..5102693))
location: region:5088917-5102693:-1
so has part: feature:5102472-5102693:-1:exon
so has part: feature:5102162-5102384:-1:exon
so has part: feature:5101918-5102075:-1:exon
so has part: feature:5101677-5101822:-1:exon
so has part: feature:5098542-5098604:-1:exon
so has part: feature:5098360-5098452:-1:exon
so has part: feature:5091765-5091926:-1:exon
so has part: feature:5091500-5091606:-1:exon
so has part: feature:5089580-5089668:-1:exon
so has part: feature:5088917-5089425:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5102472-5102693:-1:exon

position:5102472:-1
position: 5102472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5102162-5102384:-1:exon

position:5102162:-1
position: 5102162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5102384:-1
position: 5102384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5101918-5102075:-1:exon

position:5101918:-1
position: 5101918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5102075:-1
position: 5102075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5101677-5101822:-1:exon

position:5101677:-1
position: 5101677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5101822:-1
position: 5101822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5098542-5098604:-1:exon

position:5098542:-1
position: 5098542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5098604:-1
position: 5098604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5098360-5098452:-1:exon

position:5098360:-1
position: 5098360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5098452:-1
position: 5098452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5091765-5091926:-1:exon

position:5091765:-1
position: 5091765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5091926:-1
position: 5091926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5091500-5091606:-1:exon

position:5091500:-1
position: 5091500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5091606:-1
position: 5091606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5089580-5089668:-1:exon

position:5089580:-1
position: 5089580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5089668:-1
position: 5089668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5088917-5089425:-1:exon

position:5089425:-1
position: 5089425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057961
product: uncharacterized LOC105057961, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_010940699.3
SIO_010081: LOC105057961
subclass of: SO_0000673
so part of: LOC105057961
location: complement(join(5088917..5089425,5089514..5089668,5091500..5091606,5091765..5091926,5098360..5098452,5098542..5098604,5101677..5101822,5101918..5102075,5102162..5102384,5102472..5102693))
location: region:5088917-5102693:-1
so has part: feature:5102472-5102693:-1:exon
so has part: feature:5102162-5102384:-1:exon
so has part: feature:5101918-5102075:-1:exon
so has part: feature:5101677-5101822:-1:exon
so has part: feature:5098542-5098604:-1:exon
so has part: feature:5098360-5098452:-1:exon
so has part: feature:5091765-5091926:-1:exon
so has part: feature:5091500-5091606:-1:exon
so has part: feature:5089514-5089668:-1:exon
so has part: feature:5088917-5089425:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5102472-5102693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5102162-5102384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5101918-5102075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5101677-5101822:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5098542-5098604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5098360-5098452:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5091765-5091926:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5091500-5091606:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5089514-5089668:-1:exon

position:5089514:-1
position: 5089514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5088917-5089425:-1:exon

LOC105057961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057961 isoform X2
translation: MPIPRRLRLAIPLLAFFFFSTSADELSVVSHPSKLKLPSGRPVEGSPGSRPGSVMTCNRVHIHGVSRLRHPSKYAHSLKVHLSVAQGDALFRIQTIELCFHRNASIGVGMCPPGEWQKLSKNSWVQSMSPYGYGILDLRMLPDPSRTIEISTEEEFLFHRLVFLILGMIMMMMARFVSESVVFYYGGAMTLGIMVVILMVLFQGMRLLPTGRRSSLAIFMYSSVVGLGAFLLRYVSGLLRTILVEIGISEDMHNPLGILLFVCLILAGAWFGYWGVRKFVLTEDGLVDSGVAYFVEWAIYILSAVMILQSSLDTLFAAEVLGFVIIVSAITRTHGKSRFLRRLFRRMIKSVHRTQVRTSPSYSSHAEYSRFQSPGSPNRRPRMPFEENYYSTFHRTPERREFSKEEWDIITKEHTNKALKDLVSSRDFNQWALANVDRIVVTPPQDHRHERRRRIFGWL
SIO_010081: LOC105057961
subclass of: SO_0000673
so part of: LOC105057961
location: complement(join(5089169..5089425,5089580..5089668,5091500..5091606,5091765..5091926,5098360..5098452,5098542..5098604,5101677..5101822,5101918..5102075,5102162..5102384,5102472..5102553))
location: region:5089169-5102553:-1
so has part: feature:5102472-5102553:-1:exon
so has part: feature:5102162-5102384:-1:exon
so has part: feature:5101918-5102075:-1:exon
so has part: feature:5101677-5101822:-1:exon
so has part: feature:5098542-5098604:-1:exon
so has part: feature:5098360-5098452:-1:exon
so has part: feature:5091765-5091926:-1:exon
so has part: feature:5091500-5091606:-1:exon
so has part: feature:5089580-5089668:-1:exon
so has part: feature:5089169-5089425:-1:exon

XP_019710600.1
type: Protein
SIO_000068: ncbiprotein

position:5089169:-1
position: 5089169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5102553:-1
position: 5102553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5102472-5102553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5102162-5102384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5101918-5102075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5101677-5101822:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5098542-5098604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5098360-5098452:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5091765-5091926:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5091500-5091606:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5089580-5089668:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5089169-5089425:-1:exon

LOC105057961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057961 isoform X1
translation: MPIPRRLRLAIPLLAFFFFSTSADELSVVSHPSKLKLPSGRPVEGSPGSRPGSVMTCNRVHIHGVSRLRHPSKYAHSLKVHLSVAQGDALFRIQTIELCFHRNASIGVGMCPPGEWQKLSKNSWVQSMSPYGYGILDLRMLPDPSRTIEISTEEEFLFHRLVFLILGMIMMMMARFVSESVVFYYGGAMTLGIMVVILMVLFQGMRLLPTGRRSSLAIFMYSSVVGLGAFLLRYVSGLLRTILVEIGISEDMHNPLGILLFVCLILAGAWFGYWGVRKFVLTEDGLVDSGVAYFVEWAIYILSAVMILQSSLDTLFAAEVLGFVIIVSAITRTHGKSRFLRRLFRRMIKSVHRTQVRTSPSYSSHAEYSRFQSPGSGSAKHRAGNLNLASCNSPVFSSPNRRPRMPFEENYYSTFHRTPERREFSKEEWDIITKEHTNKALKDLVSSRDFNQWALANVDRIVVTPPQDHRHERRRRIFGWL
SIO_010081: LOC105057961
subclass of: SO_0000673
so part of: LOC105057961
location: complement(join(5089169..5089425,5089514..5089668,5091500..5091606,5091765..5091926,5098360..5098452,5098542..5098604,5101677..5101822,5101918..5102075,5102162..5102384,5102472..5102553))
location: region:5089169-5102553:-1
so has part: feature:5102472-5102553:-1:exon
so has part: feature:5102162-5102384:-1:exon
so has part: feature:5101918-5102075:-1:exon
so has part: feature:5101677-5101822:-1:exon
so has part: feature:5098542-5098604:-1:exon
so has part: feature:5098360-5098452:-1:exon
so has part: feature:5091765-5091926:-1:exon
so has part: feature:5091500-5091606:-1:exon
so has part: feature:5089514-5089668:-1:exon
so has part: feature:5089169-5089425:-1:exon

XP_010939001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5102472-5102553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5102162-5102384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5101918-5102075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5101677-5101822:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5098542-5098604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5098360-5098452:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5091765-5091926:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5091500-5091606:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5089514-5089668:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5089169-5089425:-1:exon

LOC114912643
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC114912643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5141133..>5141593)
location: region:5141133-5141593:-1
so has part: feature:5141133-5141593:-1:exon
subclass of: SO_0000010

114912643
type: Gene
SIO_000068: ncbigene

position:5141133:-1
position: 5141133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5141593:-1
position: 5141593
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5141133-5141593:-1:exon

LOC114912643
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC114912643
product: uncharacterized LOC114912643
inference: similar to RNA sequence (same species):INSD:GAJH01055785.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 279 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029268347.1
SIO_010081: LOC114912643
subclass of: SO_0000673
so part of: LOC114912643
location: complement(5141133..>5141593)
location: region:5141133-5141593:-1
so has part: feature:5141133-5141593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5141133-5141593:-1:exon

LOC114912643
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC114912643
inference: similar to RNA sequence (same species):INSD:GAJH01055785.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 264 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC114912643
translation: MSSASDSPVRHLKLLRPDDTLHIGHVYRLVSFEEVLREFGSKKRVRLSKLLMKQENRKKNNHHKERKERGTEDGDGGDSNQENSSCSMMVEAEEYQEEQTHQVGGSNIDISSSGGSVSRHRQWRPTLHSIAEIGI
SIO_010081: LOC114912643
subclass of: SO_0000673
so part of: LOC114912643
location: complement(5141450..>5141593)
location: region:5141450-5141593:-1
so has part: feature:5141450-5141593:-1:exon

XP_029124180.1
type: Protein
SIO_000068: ncbiprotein

position:5141450:-1
position: 5141450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5141450-5141593:-1:exon

LOC105057963
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5171396..5172856
location: region:5171396-5172856:1
so has part: feature:5171396-5172856:1:exon
subclass of: SO_0000010

105057963
type: Gene
SIO_000068: ncbigene

position:5171396:1
position: 5171396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5172856:1
position: 5172856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5171396-5172856:1:exon

LOC105057963
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057963
product: zinc finger CCCH domain-containing protein 18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_029268348.1
SIO_010081: LOC105057963
subclass of: SO_0000673
so part of: LOC105057963
location: join(5171396..5172418,5172525..5172856)
location: region:5171396-5172856:1
so has part: feature:5171396-5172418:1:exon
so has part: feature:5172525-5172856:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5171396-5172418:1:exon

position:5172418:1
position: 5172418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5172525-5172856:1:exon

position:5172525:1
position: 5172525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057963
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057963
product: zinc finger CCCH domain-containing protein 18, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019855049.2
SIO_010081: LOC105057963
subclass of: SO_0000673
so part of: LOC105057963
location: join(5171396..5172418,5172547..5172856)
location: region:5171396-5172856:1
so has part: feature:5171396-5172418:1:exon
so has part: feature:5172547-5172856:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5171396-5172418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5172547-5172856:1:exon

position:5172547:1
position: 5172547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057963
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057963
product: zinc finger CCCH domain-containing protein 18, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_010940703.3
SIO_010081: LOC105057963
subclass of: SO_0000673
so part of: LOC105057963
location: join(5171396..5172418,5172558..5172856)
location: region:5171396-5172856:1
so has part: feature:5171396-5172418:1:exon
so has part: feature:5172558-5172856:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5171396-5172418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5172558-5172856:1:exon

position:5172558:1
position: 5172558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057963
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057963
product: zinc finger CCCH domain-containing protein 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_010940701.3
SIO_010081: LOC105057963
subclass of: SO_0000673
so part of: LOC105057963
location: join(5171397..5172418,5172517..5172856)
location: region:5171397-5172856:1
so has part: feature:5171397-5172418:1:exon
so has part: feature:5172517-5172856:1:exon

position:5171397:1
position: 5171397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5171397-5172418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5172517-5172856:1:exon

position:5172517:1
position: 5172517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057963
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 18
translation: MLLSGKKPEMETKDRTASFPSNYVSLKQLQELRLKERQEEKDRLRRQGEEEERLHRQKDKKERLGKFEEKEVEERGRPWRRIGEKAALQNPRANPRSNAPIRRKWWRNGSGRPISGPSPNPEADDAAEAVGGSNRYPPGSGHWREKQPVETDRTMKNERAYGDNNDGTATDTGEVSGSEKIAPEPSPQKPEGGVKGRARGASRPKHEFRPARVIGGGLERKMEIERRFGDLGINGRAEKPAAAAERRPVAARRGGGFGITSGRRRWHTDAGGGMMWVRKTTSS
SIO_010081: LOC105057963
subclass of: SO_0000673
so part of: LOC105057963
location: 5171544..5172395
location: region:5171544-5172395:1
so has part: feature:5171544-5172395:1:exon

XP_019710608.1
type: Protein
SIO_000068: ncbiprotein

position:5171544:1
position: 5171544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5172395:1
position: 5172395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5171544-5172395:1:exon

LOC105057963
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 18
translation: MLLSGKKPEMETKDRTASFPSNYVSLKQLQELRLKERQEEKDRLRRQGEEEERLHRQKDKKERLGKFEEKEVEERGRPWRRIGEKAALQNPRANPRSNAPIRRKWWRNGSGRPISGPSPNPEADDAAEAVGGSNRYPPGSGHWREKQPVETDRTMKNERAYGDNNDGTATDTGEVSGSEKIAPEPSPQKPEGGVKGRARGASRPKHEFRPARVIGGGLERKMEIERRFGDLGINGRAEKPAAAAERRPVAARRGGGFGITSGRRRWHTDAGGGMMWVRKTTSS
SIO_010081: LOC105057963
subclass of: SO_0000673
so part of: LOC105057963
location: 5171544..5172395
location: region:5171544-5172395:1
so has part: feature:5171544-5172395:1:exon

XP_029124181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5171544-5172395:1:exon

LOC105057963
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 18
translation: MLLSGKKPEMETKDRTASFPSNYVSLKQLQELRLKERQEEKDRLRRQGEEEERLHRQKDKKERLGKFEEKEVEERGRPWRRIGEKAALQNPRANPRSNAPIRRKWWRNGSGRPISGPSPNPEADDAAEAVGGSNRYPPGSGHWREKQPVETDRTMKNERAYGDNNDGTATDTGEVSGSEKIAPEPSPQKPEGGVKGRARGASRPKHEFRPARVIGGGLERKMEIERRFGDLGINGRAEKPAAAAERRPVAARRGGGFGITSGRRRWHTDAGGGMMWVRKTTSS
SIO_010081: LOC105057963
subclass of: SO_0000673
so part of: LOC105057963
location: 5171544..5172395
location: region:5171544-5172395:1
so has part: feature:5171544-5172395:1:exon

XP_010939003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5171544-5172395:1:exon

LOC105057963
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 18
translation: MLLSGKKPEMETKDRTASFPSNYVSLKQLQELRLKERQEEKDRLRRQGEEEERLHRQKDKKERLGKFEEKEVEERGRPWRRIGEKAALQNPRANPRSNAPIRRKWWRNGSGRPISGPSPNPEADDAAEAVGGSNRYPPGSGHWREKQPVETDRTMKNERAYGDNNDGTATDTGEVSGSEKIAPEPSPQKPEGGVKGRARGASRPKHEFRPARVIGGGLERKMEIERRFGDLGINGRAEKPAAAAERRPVAARRGGGFGITSGRRRWHTDAGGGMMWVRKTTSS
SIO_010081: LOC105057963
subclass of: SO_0000673
so part of: LOC105057963
location: 5171544..5172395
location: region:5171544-5172395:1
so has part: feature:5171544-5172395:1:exon

XP_010939005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5171544-5172395:1:exon

LOC105057964
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5248365..5249996)
location: region:5248365-5249996:-1
so has part: feature:5248365-5249996:-1:exon
subclass of: SO_0000010

105057964
type: Gene
SIO_000068: ncbigene

position:5248365:-1
position: 5248365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5249996:-1
position: 5249996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5248365-5249996:-1:exon

LOC105057964
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057964
product: uncharacterized LOC105057964
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_010940705.3
SIO_010081: LOC105057964
subclass of: SO_0000673
so part of: LOC105057964
location: complement(join(5248365..5248780,5249244..5249410,5249504..5249996))
location: region:5248365-5249996:-1
so has part: feature:5249504-5249996:-1:exon
so has part: feature:5249244-5249410:-1:exon
so has part: feature:5248365-5248780:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5249504-5249996:-1:exon

position:5249504:-1
position: 5249504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5249244-5249410:-1:exon

position:5249244:-1
position: 5249244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5249410:-1
position: 5249410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5248365-5248780:-1:exon

position:5248780:-1
position: 5248780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057964
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057964
translation: MGNCQAAEAATVVIEHPSGRVERVYWSLSASQVMAANPGHYVAVIITSTSNSDSHDSSSSRNTPVKHLKLLRPDDTLHIGHVYRLVSFEEVLREFASKRHVKHSRLLAKQKDKPSSKKAGRGGGGEPRRGGGGGPAAEPESSREMPQAVEPPATTDAEFEELVRRLACNRRTSSGAATRHGQWRPALQSIAETGS
SIO_010081: LOC105057964
subclass of: SO_0000673
so part of: LOC105057964
location: complement(join(5248628..5248780,5249244..5249410,5249504..5249771))
location: region:5248628-5249771:-1
so has part: feature:5249504-5249771:-1:exon
so has part: feature:5249244-5249410:-1:exon
so has part: feature:5248628-5248780:-1:exon

XP_010939007.1
type: Protein
SIO_000068: ncbiprotein

position:5248628:-1
position: 5248628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5249771:-1
position: 5249771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5249504-5249771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5249244-5249410:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5248628-5248780:-1:exon

LOC105057965
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5326612..5337545)
location: region:5326612-5337545:-1
so has part: feature:5326612-5337545:-1:exon
subclass of: SO_0000010

105057965
type: Gene
SIO_000068: ncbigene

position:5326612:-1
position: 5326612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5337545:-1
position: 5337545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5326612-5337545:-1:exon

LOC105057965
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057965
product: nucleobase-ascorbate transporter LPE1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_010940706.3
SIO_010081: LOC105057965
subclass of: SO_0000673
so part of: LOC105057965
location: complement(join(5326612..5327094,5327454..5327614,5330021..5330098,5330191..5330282,5330383..5330441,5330525..5330611,5334550..5334646,5335549..5335733,5335857..5335916,5336025..5336100,5336291..5336391,5336475..5336651,5336771..5336868,5336944..5337080,5337388..5337545))
location: region:5326612-5337545:-1
so has part: feature:5337388-5337545:-1:exon
so has part: feature:5336944-5337080:-1:exon
so has part: feature:5336771-5336868:-1:exon
so has part: feature:5336475-5336651:-1:exon
so has part: feature:5336291-5336391:-1:exon
so has part: feature:5336025-5336100:-1:exon
so has part: feature:5335857-5335916:-1:exon
so has part: feature:5335549-5335733:-1:exon
so has part: feature:5334550-5334646:-1:exon
so has part: feature:5330525-5330611:-1:exon
so has part: feature:5330383-5330441:-1:exon
so has part: feature:5330191-5330282:-1:exon
so has part: feature:5330021-5330098:-1:exon
so has part: feature:5327454-5327614:-1:exon
so has part: feature:5326612-5327094:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5337388-5337545:-1:exon

position:5337388:-1
position: 5337388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5336944-5337080:-1:exon

position:5336944:-1
position: 5336944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5337080:-1
position: 5337080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5336771-5336868:-1:exon

position:5336771:-1
position: 5336771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5336868:-1
position: 5336868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5336475-5336651:-1:exon

position:5336475:-1
position: 5336475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5336651:-1
position: 5336651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5336291-5336391:-1:exon

position:5336291:-1
position: 5336291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5336391:-1
position: 5336391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5336025-5336100:-1:exon

position:5336025:-1
position: 5336025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5336100:-1
position: 5336100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5335857-5335916:-1:exon

position:5335857:-1
position: 5335857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5335916:-1
position: 5335916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5335549-5335733:-1:exon

position:5335549:-1
position: 5335549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5335733:-1
position: 5335733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5334550-5334646:-1:exon

position:5334550:-1
position: 5334550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5334646:-1
position: 5334646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5330525-5330611:-1:exon

position:5330525:-1
position: 5330525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5330611:-1
position: 5330611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5330383-5330441:-1:exon

position:5330383:-1
position: 5330383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5330441:-1
position: 5330441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5330191-5330282:-1:exon

position:5330191:-1
position: 5330191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5330282:-1
position: 5330282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5330021-5330098:-1:exon

position:5330021:-1
position: 5330021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5330098:-1
position: 5330098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5327454-5327614:-1:exon

position:5327454:-1
position: 5327454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5327614:-1
position: 5327614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5326612-5327094:-1:exon

position:5327094:-1
position: 5327094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleobase-ascorbate transporter LPE1
translation: MAPPPAKLDEFVPHPVKEQFPGIDFCITSPPPWPEAIVLGFQHYLVMLGTTVLIPTILVPQMGGGDEEKARVIQTLLFVAGINTLLQGFFGTRLPAVIGGSFTYLLPTISIILSRRFIFIIDPYERFVHTMRAIQGALIAASSFQIIVGFFGIWRIVIRFLSPLAAVPMVTLAALGLFYIGFPNLARCVEVGLPALVLLIFFSQYVPHAISRGRVFFDRFAVLITIVIVWVYAHILTVAGAYKHRPPATQFSCRTDRSGLIRASEWIKVPYPFQWGGPTFDGGDVFAMMAASFASLIESTGTLIAVSRFASATPVPPAIFSRGIGWQGIGILLDGMFGTANGSAASVENAGLLGLTRVGSRRVIHIAACFMLFFSILGKFGALLASIPLPIVAALYCILFAYAASAGLGFLQFCNLNSLRTKFILGFSLFMGLSVPEYFKEYEILAGYGPARTRSRAFNDIVNVIFSSPATVAAIVAYFLDCTLLLGVASTRRDRGWHWWEKFRSYRTDPRSEEFYSLPYNLNKFFPSL
SIO_010081: LOC105057965
subclass of: SO_0000673
so part of: LOC105057965
location: complement(join(5326876..5327094,5327454..5327614,5330021..5330098,5330191..5330282,5330383..5330441,5330525..5330611,5334550..5334646,5335549..5335733,5335857..5335916,5336025..5336100,5336291..5336391,5336475..5336651,5336771..5336868,5336944..5337043))
location: region:5326876-5337043:-1
so has part: feature:5336944-5337043:-1:exon
so has part: feature:5336771-5336868:-1:exon
so has part: feature:5336475-5336651:-1:exon
so has part: feature:5336291-5336391:-1:exon
so has part: feature:5336025-5336100:-1:exon
so has part: feature:5335857-5335916:-1:exon
so has part: feature:5335549-5335733:-1:exon
so has part: feature:5334550-5334646:-1:exon
so has part: feature:5330525-5330611:-1:exon
so has part: feature:5330383-5330441:-1:exon
so has part: feature:5330191-5330282:-1:exon
so has part: feature:5330021-5330098:-1:exon
so has part: feature:5327454-5327614:-1:exon
so has part: feature:5326876-5327094:-1:exon

XP_010939008.1
type: Protein
SIO_000068: ncbiprotein

position:5326876:-1
position: 5326876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5337043:-1
position: 5337043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5336944-5337043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5336771-5336868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5336475-5336651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5336291-5336391:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5336025-5336100:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5335857-5335916:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5335549-5335733:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5334550-5334646:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5330525-5330611:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5330383-5330441:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5330191-5330282:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5330021-5330098:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5327454-5327614:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5326876-5327094:-1:exon

LOC105057966
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5420471..5422737)
location: region:5420471-5422737:-1
so has part: feature:5420471-5422737:-1:exon
subclass of: SO_0000010

105057966
type: Gene
SIO_000068: ncbigene

position:5420471:-1
position: 5420471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5422737:-1
position: 5422737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5420471-5422737:-1:exon

LOC105057966
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057966
product: cyclin-D2-1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_010940709.3
SIO_010081: LOC105057966
subclass of: SO_0000673
so part of: LOC105057966
location: complement(join(5420471..5420910,5421274..5421407,5421532..5421823,5421959..5422045,5422157..5422737))
location: region:5420471-5422737:-1
so has part: feature:5422157-5422737:-1:exon
so has part: feature:5421959-5422045:-1:exon
so has part: feature:5421532-5421823:-1:exon
so has part: feature:5421274-5421407:-1:exon
so has part: feature:5420471-5420910:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5422157-5422737:-1:exon

position:5422157:-1
position: 5422157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5421959-5422045:-1:exon

position:5421959:-1
position: 5421959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5422045:-1
position: 5422045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5421532-5421823:-1:exon

position:5421532:-1
position: 5421532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5421823:-1
position: 5421823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5421274-5421407:-1:exon

position:5421274:-1
position: 5421274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5421407:-1
position: 5421407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5420471-5420910:-1:exon

position:5420910:-1
position: 5420910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057966
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057966
product: cyclin-D2-1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_010940708.3
SIO_010081: LOC105057966
subclass of: SO_0000673
so part of: LOC105057966
location: complement(join(5420471..5420904,5421274..5421407,5421532..5421832,5421959..5422045,5422157..5422737))
location: region:5420471-5422737:-1
so has part: feature:5422157-5422737:-1:exon
so has part: feature:5421959-5422045:-1:exon
so has part: feature:5421532-5421832:-1:exon
so has part: feature:5421274-5421407:-1:exon
so has part: feature:5420471-5420904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5422157-5422737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5421959-5422045:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5421532-5421832:-1:exon

position:5421832:-1
position: 5421832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5421274-5421407:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5420471-5420904:-1:exon

position:5420904:-1
position: 5420904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057966
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057966
product: cyclin-D2-1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_010940707.3
SIO_010081: LOC105057966
subclass of: SO_0000673
so part of: LOC105057966
location: complement(join(5420471..5420910,5421274..5421407,5421532..5421832,5421959..5422045,5422157..5422737))
location: region:5420471-5422737:-1
so has part: feature:5422157-5422737:-1:exon
so has part: feature:5421959-5422045:-1:exon
so has part: feature:5421532-5421832:-1:exon
so has part: feature:5421274-5421407:-1:exon
so has part: feature:5420471-5420910:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5422157-5422737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5421959-5422045:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5421532-5421832:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5421274-5421407:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5420471-5420910:-1:exon

LOC105057966
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-D2-1 isoform X3
translation: MVLSPELLSASSNLFCAEDADDVASWDDDGVAVVDEEWNLPVSPGDRPVAALLAAEPDHMPRPDYLSRFLARALDSTARQDAINWILKVNEFYRFRPVTAYLSVNYLDRFLSSHNLPGQKSGWPIQLLSVACVSVAAKMEETHVPLLLDLQVLDPHFVFEPRTVRRMELLLMAALRWRMRSITPFDFLPHLAAALPSSAALLSRAADLILSTHRVVDFLAYRPSAIAAAAVLCAADEIADVPALDHGDSSSRFDEWVNKVQETVLGCRQLMEEYLIDTCPSARRAKPGREPPTPQSPVGVLDAAACGSCDTQKSSAAPMPEPPPKRRRLAEGRCIESIDTGNDGKNL
SIO_010081: LOC105057966
subclass of: SO_0000673
so part of: LOC105057966
location: complement(join(5420644..5420910,5421274..5421407,5421532..5421823,5421959..5422045,5422157..5422420))
location: region:5420644-5422420:-1
so has part: feature:5422157-5422420:-1:exon
so has part: feature:5421959-5422045:-1:exon
so has part: feature:5421532-5421823:-1:exon
so has part: feature:5421274-5421407:-1:exon
so has part: feature:5420644-5420910:-1:exon

XP_010939011.1
type: Protein
SIO_000068: ncbiprotein

position:5420644:-1
position: 5420644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5422420:-1
position: 5422420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5422157-5422420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5421959-5422045:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5421532-5421823:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5421274-5421407:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5420644-5420910:-1:exon

LOC105057966
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-D2-1 isoform X2
translation: MVLSPELLSASSNLFCAEDADDVASWDDDGVAVVDEEWNLPVSPGDRPVAALLAAEPDHMPRPDYLSRFLARALDSTARQDAINWILKVNEFYRFRPVTAYLSVNYLDRFLSSHNLPTMQGQKSGWPIQLLSVACVSVAAKMEETHVPLLLDLQVLDPHFVFEPRTVRRMELLLMAALRWRMRSITPFDFLPHLAAALPSSAALLSRAADLILSTHRVVDFLAYRPSAIAAAAVLCAADEIADVPALDHGDSSSRFDEWVNKETVLGCRQLMEEYLIDTCPSARRAKPGREPPTPQSPVGVLDAAACGSCDTQKSSAAPMPEPPPKRRRLAEGRCIESIDTGNDGKNL
SIO_010081: LOC105057966
subclass of: SO_0000673
so part of: LOC105057966
location: complement(join(5420644..5420904,5421274..5421407,5421532..5421832,5421959..5422045,5422157..5422420))
location: region:5420644-5422420:-1
so has part: feature:5422157-5422420:-1:exon
so has part: feature:5421959-5422045:-1:exon
so has part: feature:5421532-5421832:-1:exon
so has part: feature:5421274-5421407:-1:exon
so has part: feature:5420644-5420904:-1:exon

XP_010939010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5422157-5422420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5421959-5422045:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5421532-5421832:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5421274-5421407:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5420644-5420904:-1:exon

LOC105057966
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-D2-1 isoform X1
translation: MVLSPELLSASSNLFCAEDADDVASWDDDGVAVVDEEWNLPVSPGDRPVAALLAAEPDHMPRPDYLSRFLARALDSTARQDAINWILKVNEFYRFRPVTAYLSVNYLDRFLSSHNLPTMQGQKSGWPIQLLSVACVSVAAKMEETHVPLLLDLQVLDPHFVFEPRTVRRMELLLMAALRWRMRSITPFDFLPHLAAALPSSAALLSRAADLILSTHRVVDFLAYRPSAIAAAAVLCAADEIADVPALDHGDSSSRFDEWVNKVQETVLGCRQLMEEYLIDTCPSARRAKPGREPPTPQSPVGVLDAAACGSCDTQKSSAAPMPEPPPKRRRLAEGRCIESIDTGNDGKNL
SIO_010081: LOC105057966
subclass of: SO_0000673
so part of: LOC105057966
location: complement(join(5420644..5420910,5421274..5421407,5421532..5421832,5421959..5422045,5422157..5422420))
location: region:5420644-5422420:-1
so has part: feature:5422157-5422420:-1:exon
so has part: feature:5421959-5422045:-1:exon
so has part: feature:5421532-5421832:-1:exon
so has part: feature:5421274-5421407:-1:exon
so has part: feature:5420644-5420910:-1:exon

XP_010939009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5422157-5422420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5421959-5422045:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5421532-5421832:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5421274-5421407:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5420644-5420910:-1:exon

LOC105057967
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5624364..5644213
location: region:5624364-5644213:1
so has part: feature:5624364-5644213:1:exon
subclass of: SO_0000010

105057967
type: Gene
SIO_000068: ncbigene

position:5624364:1
position: 5624364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5644213:1
position: 5644213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5624364-5644213:1:exon

LOC105057967
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057967
product: serine carboxypeptidase-like 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_010940710.3
SIO_010081: LOC105057967
subclass of: SO_0000673
so part of: LOC105057967
location: join(5624364..5624599,5624852..5624997,5625376..5625452,5625524..5625646,5625745..5625847,5626608..5626645,5627745..5627846,5627930..5628013,5628082..5628228,5628952..5629023,5643069..5643187,5643287..5643400,5643511..5643573,5643849..5644213)
location: region:5624364-5644213:1
so has part: feature:5624364-5624599:1:exon
so has part: feature:5624852-5624997:1:exon
so has part: feature:5625376-5625452:1:exon
so has part: feature:5625524-5625646:1:exon
so has part: feature:5625745-5625847:1:exon
so has part: feature:5626608-5626645:1:exon
so has part: feature:5627745-5627846:1:exon
so has part: feature:5627930-5628013:1:exon
so has part: feature:5628082-5628228:1:exon
so has part: feature:5628952-5629023:1:exon
so has part: feature:5643069-5643187:1:exon
so has part: feature:5643287-5643400:1:exon
so has part: feature:5643511-5643573:1:exon
so has part: feature:5643849-5644213:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5624364-5624599:1:exon

position:5624599:1
position: 5624599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5624852-5624997:1:exon

position:5624852:1
position: 5624852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5624997:1
position: 5624997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5625376-5625452:1:exon

position:5625376:1
position: 5625376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5625452:1
position: 5625452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5625524-5625646:1:exon

position:5625524:1
position: 5625524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5625646:1
position: 5625646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5625745-5625847:1:exon

position:5625745:1
position: 5625745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5625847:1
position: 5625847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5626608-5626645:1:exon

position:5626608:1
position: 5626608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5626645:1
position: 5626645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5627745-5627846:1:exon

position:5627745:1
position: 5627745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5627846:1
position: 5627846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5627930-5628013:1:exon

position:5627930:1
position: 5627930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5628013:1
position: 5628013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5628082-5628228:1:exon

position:5628082:1
position: 5628082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5628228:1
position: 5628228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5628952-5629023:1:exon

position:5628952:1
position: 5628952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5629023:1
position: 5629023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5643069-5643187:1:exon

position:5643069:1
position: 5643069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5643187:1
position: 5643187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5643287-5643400:1:exon

position:5643287:1
position: 5643287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5643400:1
position: 5643400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5643511-5643573:1:exon

position:5643511:1
position: 5643511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5643573:1
position: 5643573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5643849-5644213:1:exon

position:5643849:1
position: 5643849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057967
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057967
product: serine carboxypeptidase-like 18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_010940711.3
SIO_010081: LOC105057967
subclass of: SO_0000673
so part of: LOC105057967
location: join(5624364..5624599,5624852..5624997,5625376..5625452,5625524..5625646,5625745..5625847,5626608..5626645,5627745..5627846,5627930..5628013,5628082..5628228,5628952..5629023,5643069..5643187,5643287..5643400,5643511..5643556,5643938..5644213)
location: region:5624364-5644213:1
so has part: feature:5624364-5624599:1:exon
so has part: feature:5624852-5624997:1:exon
so has part: feature:5625376-5625452:1:exon
so has part: feature:5625524-5625646:1:exon
so has part: feature:5625745-5625847:1:exon
so has part: feature:5626608-5626645:1:exon
so has part: feature:5627745-5627846:1:exon
so has part: feature:5627930-5628013:1:exon
so has part: feature:5628082-5628228:1:exon
so has part: feature:5628952-5629023:1:exon
so has part: feature:5643069-5643187:1:exon
so has part: feature:5643287-5643400:1:exon
so has part: feature:5643511-5643556:1:exon
so has part: feature:5643938-5644213:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5624364-5624599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5624852-5624997:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5625376-5625452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5625524-5625646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5625745-5625847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5626608-5626645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5627745-5627846:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5627930-5628013:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5628082-5628228:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5628952-5629023:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5643069-5643187:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5643287-5643400:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5643511-5643556:1:exon

position:5643556:1
position: 5643556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5643938-5644213:1:exon

position:5643938:1
position: 5643938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057967
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057967
product: serine carboxypeptidase-like 18, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_010940712.3
SIO_010081: LOC105057967
subclass of: SO_0000673
so part of: LOC105057967
location: join(5624364..5624599,5624852..5624997,5625376..5625452,5625524..5625646,5625745..5625847,5626608..5626645,5627745..5627846,5627930..5628013,5628082..5628228,5643069..5643187,5643287..5643400,5643511..5643573,5643849..5644213)
location: region:5624364-5644213:1
so has part: feature:5624364-5624599:1:exon
so has part: feature:5624852-5624997:1:exon
so has part: feature:5625376-5625452:1:exon
so has part: feature:5625524-5625646:1:exon
so has part: feature:5625745-5625847:1:exon
so has part: feature:5626608-5626645:1:exon
so has part: feature:5627745-5627846:1:exon
so has part: feature:5627930-5628013:1:exon
so has part: feature:5628082-5628228:1:exon
so has part: feature:5643069-5643187:1:exon
so has part: feature:5643287-5643400:1:exon
so has part: feature:5643511-5643573:1:exon
so has part: feature:5643849-5644213:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5624364-5624599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5624852-5624997:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5625376-5625452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5625524-5625646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5625745-5625847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5626608-5626645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5627745-5627846:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5627930-5628013:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5628082-5628228:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5643069-5643187:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5643287-5643400:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5643511-5643573:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5643849-5644213:1:exon

LOC105057967
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057967
product: serine carboxypeptidase-like 18, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_010940713.3
SIO_010081: LOC105057967
subclass of: SO_0000673
so part of: LOC105057967
location: join(5624364..5624599,5624852..5624997,5625376..5625452,5625524..5625646,5625745..5625847,5626608..5626645,5627745..5627846,5627930..5628013,5628082..5628228,5643069..5643187,5643287..5643400,5643511..5643556,5643938..5644213)
location: region:5624364-5644213:1
so has part: feature:5624364-5624599:1:exon
so has part: feature:5624852-5624997:1:exon
so has part: feature:5625376-5625452:1:exon
so has part: feature:5625524-5625646:1:exon
so has part: feature:5625745-5625847:1:exon
so has part: feature:5626608-5626645:1:exon
so has part: feature:5627745-5627846:1:exon
so has part: feature:5627930-5628013:1:exon
so has part: feature:5628082-5628228:1:exon
so has part: feature:5643069-5643187:1:exon
so has part: feature:5643287-5643400:1:exon
so has part: feature:5643511-5643556:1:exon
so has part: feature:5643938-5644213:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5624364-5624599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5624852-5624997:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5625376-5625452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5625524-5625646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5625745-5625847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5626608-5626645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5627745-5627846:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5627930-5628013:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5628082-5628228:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5643069-5643187:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5643287-5643400:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5643511-5643556:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5643938-5644213:1:exon

LOC105057967
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine carboxypeptidase-like 18 isoform X2
translation: MALTILFFLYYLSSTALSASIITHLPGFQGPLPFYLETGYVSVDEENGVELFYYFIESERNPSEDPLLLWLTGGPGCSAFSGLVFEIGPLKFVTAEYNGSLPNLVYHPYSWTRVANVIFLDSPVGTGFSFSRKPEGYAVGDISSSMQVYKFLRKWFVDHAQFLSNSLYISGDSYGGKVVPVVADAISKDIEADQQSRLNLKGYLIGNPATGLKVDKNARVPYAHGVGIISDVLYELIQKNCQGEDYENPVREQCVTKLDAFHKFYSEIQTSHILEPKCAAASPKPEDMIGDRRSVKELELHSPPPHPALKCRSYAYFLSYYWANSNITRKALHIKKGTVREWQRCNSDLAYAKDIPNNINYHLSLTNKGYRALVYSGDHDLVVPFVGTQAWIRSLNFSVVDEWRSWHVGGQVAGYTTAFSNNLTFATVRGAGHTAPEYKPEECLAMLQRWISSRPL
SIO_010081: LOC105057967
subclass of: SO_0000673
so part of: LOC105057967
location: join(5624484..5624599,5624852..5624997,5625376..5625452,5625524..5625646,5625745..5625847,5626608..5626645,5627745..5627846,5627930..5628013,5628082..5628228,5628952..5629023,5643069..5643187,5643287..5643400,5643511..5643556,5643938..5644021)
location: region:5624484-5644021:1
so has part: feature:5624484-5624599:1:exon
so has part: feature:5624852-5624997:1:exon
so has part: feature:5625376-5625452:1:exon
so has part: feature:5625524-5625646:1:exon
so has part: feature:5625745-5625847:1:exon
so has part: feature:5626608-5626645:1:exon
so has part: feature:5627745-5627846:1:exon
so has part: feature:5627930-5628013:1:exon
so has part: feature:5628082-5628228:1:exon
so has part: feature:5628952-5629023:1:exon
so has part: feature:5643069-5643187:1:exon
so has part: feature:5643287-5643400:1:exon
so has part: feature:5643511-5643556:1:exon
so has part: feature:5643938-5644021:1:exon

XP_010939013.1
type: Protein
SIO_000068: ncbiprotein

position:5624484:1
position: 5624484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5644021:1
position: 5644021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5624484-5624599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5624852-5624997:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5625376-5625452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5625524-5625646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5625745-5625847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5626608-5626645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5627745-5627846:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5627930-5628013:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5628082-5628228:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5628952-5629023:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5643069-5643187:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5643287-5643400:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5643511-5643556:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5643938-5644021:1:exon

LOC105057967
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine carboxypeptidase-like 18 isoform X4
translation: MALTILFFLYYLSSTALSASIITHLPGFQGPLPFYLETGYVSVDEENGVELFYYFIESERNPSEDPLLLWLTGGPGCSAFSGLVFEIGPLKFVTAEYNGSLPNLVYHPYSWTRVANVIFLDSPVGTGFSFSRKPEGYAVGDISSSMQVYKFLRKWFVDHAQFLSNSLYISGDSYGGKVVPVVADAISKDIEADQQSRLNLKGYLIGNPATGLKVDKNARVPYAHGVGIISDVLYELIQKNCQGEDYENPVREQCVTKLDAFHKFYSEIQTSHILEPKCAAASPKPEDMIGDRRSVKELELHSPPPHPALKCRGTVREWQRCNSDLAYAKDIPNNINYHLSLTNKGYRALVYSGDHDLVVPFVGTQAWIRSLNFSVVDEWRSWHVGGQVAGYTTAFSNNLTFATVRGAGHTAPEYKPEECLAMLQRWISSRPL
SIO_010081: LOC105057967
subclass of: SO_0000673
so part of: LOC105057967
location: join(5624484..5624599,5624852..5624997,5625376..5625452,5625524..5625646,5625745..5625847,5626608..5626645,5627745..5627846,5627930..5628013,5628082..5628228,5643069..5643187,5643287..5643400,5643511..5643556,5643938..5644021)
location: region:5624484-5644021:1
so has part: feature:5624484-5624599:1:exon
so has part: feature:5624852-5624997:1:exon
so has part: feature:5625376-5625452:1:exon
so has part: feature:5625524-5625646:1:exon
so has part: feature:5625745-5625847:1:exon
so has part: feature:5626608-5626645:1:exon
so has part: feature:5627745-5627846:1:exon
so has part: feature:5627930-5628013:1:exon
so has part: feature:5628082-5628228:1:exon
so has part: feature:5643069-5643187:1:exon
so has part: feature:5643287-5643400:1:exon
so has part: feature:5643511-5643556:1:exon
so has part: feature:5643938-5644021:1:exon

XP_010939015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5624484-5624599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5624852-5624997:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5625376-5625452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5625524-5625646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5625745-5625847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5626608-5626645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5627745-5627846:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5627930-5628013:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5628082-5628228:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5643069-5643187:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5643287-5643400:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5643511-5643556:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5643938-5644021:1:exon

LOC105057967
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine carboxypeptidase-like 17 isoform X1
translation: MALTILFFLYYLSSTALSASIITHLPGFQGPLPFYLETGYVSVDEENGVELFYYFIESERNPSEDPLLLWLTGGPGCSAFSGLVFEIGPLKFVTAEYNGSLPNLVYHPYSWTRVANVIFLDSPVGTGFSFSRKPEGYAVGDISSSMQVYKFLRKWFVDHAQFLSNSLYISGDSYGGKVVPVVADAISKDIEADQQSRLNLKGYLIGNPATGLKVDKNARVPYAHGVGIISDVLYELIQKNCQGEDYENPVREQCVTKLDAFHKFYSEIQTSHILEPKCAAASPKPEDMIGDRRSVKELELHSPPPHPALKCRSYAYFLSYYWANSNITRKALHIKKGTVREWQRCNSDLAYAKDIPNNINYHLSLTNKGYRALVYSGDHDLVVPFVGTQAWIRSLNFSVVDEWRSWHVGGQVAGYTTAFSNNLTFATVRVSYTHTYIYIVSCTKKKSFLSGREFLFRVILFFHLGCWSHSSGVQT
SIO_010081: LOC105057967
subclass of: SO_0000673
so part of: LOC105057967
location: join(5624484..5624599,5624852..5624997,5625376..5625452,5625524..5625646,5625745..5625847,5626608..5626645,5627745..5627846,5627930..5628013,5628082..5628228,5628952..5629023,5643069..5643187,5643287..5643400,5643511..5643573,5643849..5643972)
location: region:5624484-5643972:1
so has part: feature:5624484-5624599:1:exon
so has part: feature:5624852-5624997:1:exon
so has part: feature:5625376-5625452:1:exon
so has part: feature:5625524-5625646:1:exon
so has part: feature:5625745-5625847:1:exon
so has part: feature:5626608-5626645:1:exon
so has part: feature:5627745-5627846:1:exon
so has part: feature:5627930-5628013:1:exon
so has part: feature:5628082-5628228:1:exon
so has part: feature:5628952-5629023:1:exon
so has part: feature:5643069-5643187:1:exon
so has part: feature:5643287-5643400:1:exon
so has part: feature:5643511-5643573:1:exon
so has part: feature:5643849-5643972:1:exon

XP_010939012.1
type: Protein
SIO_000068: ncbiprotein

position:5643972:1
position: 5643972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5624484-5624599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5624852-5624997:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5625376-5625452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5625524-5625646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5625745-5625847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5626608-5626645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5627745-5627846:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5627930-5628013:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5628082-5628228:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5628952-5629023:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5643069-5643187:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5643287-5643400:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5643511-5643573:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5643849-5643972:1:exon

LOC105057967
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine carboxypeptidase-like 17 isoform X3
translation: MALTILFFLYYLSSTALSASIITHLPGFQGPLPFYLETGYVSVDEENGVELFYYFIESERNPSEDPLLLWLTGGPGCSAFSGLVFEIGPLKFVTAEYNGSLPNLVYHPYSWTRVANVIFLDSPVGTGFSFSRKPEGYAVGDISSSMQVYKFLRKWFVDHAQFLSNSLYISGDSYGGKVVPVVADAISKDIEADQQSRLNLKGYLIGNPATGLKVDKNARVPYAHGVGIISDVLYELIQKNCQGEDYENPVREQCVTKLDAFHKFYSEIQTSHILEPKCAAASPKPEDMIGDRRSVKELELHSPPPHPALKCRGTVREWQRCNSDLAYAKDIPNNINYHLSLTNKGYRALVYSGDHDLVVPFVGTQAWIRSLNFSVVDEWRSWHVGGQVAGYTTAFSNNLTFATVRVSYTHTYIYIVSCTKKKSFLSGREFLFRVILFFHLGCWSHSSGVQT
SIO_010081: LOC105057967
subclass of: SO_0000673
so part of: LOC105057967
location: join(5624484..5624599,5624852..5624997,5625376..5625452,5625524..5625646,5625745..5625847,5626608..5626645,5627745..5627846,5627930..5628013,5628082..5628228,5643069..5643187,5643287..5643400,5643511..5643573,5643849..5643972)
location: region:5624484-5643972:1
so has part: feature:5624484-5624599:1:exon
so has part: feature:5624852-5624997:1:exon
so has part: feature:5625376-5625452:1:exon
so has part: feature:5625524-5625646:1:exon
so has part: feature:5625745-5625847:1:exon
so has part: feature:5626608-5626645:1:exon
so has part: feature:5627745-5627846:1:exon
so has part: feature:5627930-5628013:1:exon
so has part: feature:5628082-5628228:1:exon
so has part: feature:5643069-5643187:1:exon
so has part: feature:5643287-5643400:1:exon
so has part: feature:5643511-5643573:1:exon
so has part: feature:5643849-5643972:1:exon

XP_010939014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5624484-5624599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5624852-5624997:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5625376-5625452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5625524-5625646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5625745-5625847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5626608-5626645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5627745-5627846:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5627930-5628013:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5628082-5628228:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5643069-5643187:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5643287-5643400:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5643511-5643573:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5643849-5643972:1:exon

LOC105057969
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5653286..5681717
location: region:5653286-5681717:1
so has part: feature:5653286-5681717:1:exon
subclass of: SO_0000010

105057969
type: Gene
SIO_000068: ncbigene

position:5653286:1
position: 5653286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5681717:1
position: 5681717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5653286-5681717:1:exon

LOC105057969
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057969
product: serine carboxypeptidase-like 18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029268349.1
SIO_010081: LOC105057969
subclass of: SO_0000673
so part of: LOC105057969
location: join(5653286..5653562,5653835..5653980,5654366..5654442,5654514..5654636,5654736..5654838,5655598..5655635,5656709..5656810,5656893..5656976,5657045..5657191,5657869..5657940,5658370..5658488,5658589..5658702,5658810..5658855,5658972..5659102,5681676..5681717)
location: region:5653286-5681717:1
so has part: feature:5653286-5653562:1:exon
so has part: feature:5653835-5653980:1:exon
so has part: feature:5654366-5654442:1:exon
so has part: feature:5654514-5654636:1:exon
so has part: feature:5654736-5654838:1:exon
so has part: feature:5655598-5655635:1:exon
so has part: feature:5656709-5656810:1:exon
so has part: feature:5656893-5656976:1:exon
so has part: feature:5657045-5657191:1:exon
so has part: feature:5657869-5657940:1:exon
so has part: feature:5658370-5658488:1:exon
so has part: feature:5658589-5658702:1:exon
so has part: feature:5658810-5658855:1:exon
so has part: feature:5658972-5659102:1:exon
so has part: feature:5681676-5681717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5653286-5653562:1:exon

position:5653562:1
position: 5653562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5653835-5653980:1:exon

position:5653835:1
position: 5653835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5653980:1
position: 5653980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5654366-5654442:1:exon

position:5654366:1
position: 5654366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5654442:1
position: 5654442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5654514-5654636:1:exon

position:5654514:1
position: 5654514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5654636:1
position: 5654636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5654736-5654838:1:exon

position:5654736:1
position: 5654736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5654838:1
position: 5654838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5655598-5655635:1:exon

position:5655598:1
position: 5655598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5655635:1
position: 5655635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5656709-5656810:1:exon

position:5656709:1
position: 5656709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5656810:1
position: 5656810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5656893-5656976:1:exon

position:5656893:1
position: 5656893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5656976:1
position: 5656976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5657045-5657191:1:exon

position:5657045:1
position: 5657045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5657191:1
position: 5657191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5657869-5657940:1:exon

position:5657869:1
position: 5657869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5657940:1
position: 5657940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5658370-5658488:1:exon

position:5658370:1
position: 5658370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5658488:1
position: 5658488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5658589-5658702:1:exon

position:5658589:1
position: 5658589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5658702:1
position: 5658702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5658810-5658855:1:exon

position:5658810:1
position: 5658810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5658855:1
position: 5658855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5658972-5659102:1:exon

position:5658972:1
position: 5658972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5659102:1
position: 5659102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5681676-5681717:1:exon

position:5681676:1
position: 5681676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057969
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057969
product: serine carboxypeptidase-like 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_010940714.3
SIO_010081: LOC105057969
subclass of: SO_0000673
so part of: LOC105057969
location: join(5653286..5653562,5653835..5653980,5654366..5654442,5654514..5654636,5654736..5654838,5655598..5655635,5656709..5656810,5656893..5656976,5657045..5657191,5657869..5657940,5658370..5658488,5658589..5658702,5658810..5658855,5658972..5659260)
location: region:5653286-5659260:1
so has part: feature:5653286-5653562:1:exon
so has part: feature:5653835-5653980:1:exon
so has part: feature:5654366-5654442:1:exon
so has part: feature:5654514-5654636:1:exon
so has part: feature:5654736-5654838:1:exon
so has part: feature:5655598-5655635:1:exon
so has part: feature:5656709-5656810:1:exon
so has part: feature:5656893-5656976:1:exon
so has part: feature:5657045-5657191:1:exon
so has part: feature:5657869-5657940:1:exon
so has part: feature:5658370-5658488:1:exon
so has part: feature:5658589-5658702:1:exon
so has part: feature:5658810-5658855:1:exon
so has part: feature:5658972-5659260:1:exon

position:5659260:1
position: 5659260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5653286-5653562:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5653835-5653980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5654366-5654442:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5654514-5654636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5654736-5654838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5655598-5655635:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5656709-5656810:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5656893-5656976:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5657045-5657191:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5657869-5657940:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5658370-5658488:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5658589-5658702:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5658810-5658855:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5658972-5659260:1:exon

LOC105057969
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine carboxypeptidase-like 18
translation: MCQSSGLHPYARAHAPDKRVIRKRLSGLSSSSSPRASSPSFLMALTVLFFLYYLSSTALSASIITHLPGFQGPLPFYLETGYVSVDEENGVELFYYFIESERNPSEDPLLLWLTGGPGCSAFSGLVFEIGPLKFVTAEYNGSLPNLVYHPYSWTKVANVIFLDSPVGTGFSFSRKPKGYAVGDISSSMQVYKFLRKWFVDHARFLSNSLYISGDSYAGKVVPVIAKAISEDIEADQQSSLNLKGYLIGNPVTGLKIDMNARVPYAHGVGIISDALYELIQKNCEGEDYENPVRAKCVTKLDAFHKFYSEIHAGYILDPKCTRASPKPEDMIGDRRSLEELELHSPPPHPALKCRTYAYFLSYYWANSNVTRKALHIKKGTVREWQRCNDDLGYIKDIPNNINYHLSLTSKGYRALIYSGDHDLMIPFLGTQAWISSLNFSVVDEWRSWHVGGQVAGYTTTYSNNLTFATVKGAGHTAPEYKPEECLAMLQRWISSRLL
SIO_010081: LOC105057969
subclass of: SO_0000673
so part of: LOC105057969
location: join(5653321..5653562,5653835..5653980,5654366..5654442,5654514..5654636,5654736..5654838,5655598..5655635,5656709..5656810,5656893..5656976,5657045..5657191,5657869..5657940,5658370..5658488,5658589..5658702,5658810..5658855,5658972..5659055)
location: region:5653321-5659055:1
so has part: feature:5653321-5653562:1:exon
so has part: feature:5653835-5653980:1:exon
so has part: feature:5654366-5654442:1:exon
so has part: feature:5654514-5654636:1:exon
so has part: feature:5654736-5654838:1:exon
so has part: feature:5655598-5655635:1:exon
so has part: feature:5656709-5656810:1:exon
so has part: feature:5656893-5656976:1:exon
so has part: feature:5657045-5657191:1:exon
so has part: feature:5657869-5657940:1:exon
so has part: feature:5658370-5658488:1:exon
so has part: feature:5658589-5658702:1:exon
so has part: feature:5658810-5658855:1:exon
so has part: feature:5658972-5659055:1:exon

XP_029124182.1
type: Protein
SIO_000068: ncbiprotein

position:5653321:1
position: 5653321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5659055:1
position: 5659055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5653321-5653562:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5653835-5653980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5654366-5654442:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5654514-5654636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5654736-5654838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5655598-5655635:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5656709-5656810:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5656893-5656976:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5657045-5657191:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5657869-5657940:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5658370-5658488:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5658589-5658702:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5658810-5658855:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5658972-5659055:1:exon

LOC105057969
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine carboxypeptidase-like 18
translation: MCQSSGLHPYARAHAPDKRVIRKRLSGLSSSSSPRASSPSFLMALTVLFFLYYLSSTALSASIITHLPGFQGPLPFYLETGYVSVDEENGVELFYYFIESERNPSEDPLLLWLTGGPGCSAFSGLVFEIGPLKFVTAEYNGSLPNLVYHPYSWTKVANVIFLDSPVGTGFSFSRKPKGYAVGDISSSMQVYKFLRKWFVDHARFLSNSLYISGDSYAGKVVPVIAKAISEDIEADQQSSLNLKGYLIGNPVTGLKIDMNARVPYAHGVGIISDALYELIQKNCEGEDYENPVRAKCVTKLDAFHKFYSEIHAGYILDPKCTRASPKPEDMIGDRRSLEELELHSPPPHPALKCRTYAYFLSYYWANSNVTRKALHIKKGTVREWQRCNDDLGYIKDIPNNINYHLSLTSKGYRALIYSGDHDLMIPFLGTQAWISSLNFSVVDEWRSWHVGGQVAGYTTTYSNNLTFATVKGAGHTAPEYKPEECLAMLQRWISSRLL
SIO_010081: LOC105057969
subclass of: SO_0000673
so part of: LOC105057969
location: join(5653321..5653562,5653835..5653980,5654366..5654442,5654514..5654636,5654736..5654838,5655598..5655635,5656709..5656810,5656893..5656976,5657045..5657191,5657869..5657940,5658370..5658488,5658589..5658702,5658810..5658855,5658972..5659055)
location: region:5653321-5659055:1
so has part: feature:5653321-5653562:1:exon
so has part: feature:5653835-5653980:1:exon
so has part: feature:5654366-5654442:1:exon
so has part: feature:5654514-5654636:1:exon
so has part: feature:5654736-5654838:1:exon
so has part: feature:5655598-5655635:1:exon
so has part: feature:5656709-5656810:1:exon
so has part: feature:5656893-5656976:1:exon
so has part: feature:5657045-5657191:1:exon
so has part: feature:5657869-5657940:1:exon
so has part: feature:5658370-5658488:1:exon
so has part: feature:5658589-5658702:1:exon
so has part: feature:5658810-5658855:1:exon
so has part: feature:5658972-5659055:1:exon

XP_010939016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5653321-5653562:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5653835-5653980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5654366-5654442:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5654514-5654636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5654736-5654838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5655598-5655635:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5656709-5656810:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5656893-5656976:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5657045-5657191:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5657869-5657940:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5658370-5658488:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5658589-5658702:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5658810-5658855:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5658972-5659055:1:exon

LOC105057993
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057993
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5757690..5759853
location: region:5757690-5759853:1
so has part: feature:5757690-5759853:1:exon
subclass of: SO_0000010

105057993
type: Gene
SIO_000068: ncbigene

position:5757690:1
position: 5757690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5759853:1
position: 5759853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5757690-5759853:1:exon

LOC105057993
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057993
product: heptahelical transmembrane protein 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019855137.2
SIO_010081: LOC105057993
subclass of: SO_0000673
so part of: LOC105057993
location: join(5757690..5757985,5758215..5758503,5759015..5759853)
location: region:5757690-5759853:1
so has part: feature:5757690-5757985:1:exon
so has part: feature:5758215-5758503:1:exon
so has part: feature:5759015-5759853:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5757690-5757985:1:exon

position:5757985:1
position: 5757985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5758215-5758503:1:exon

position:5758215:1
position: 5758215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5758503:1
position: 5758503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5759015-5759853:1:exon

position:5759015:1
position: 5759015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057993
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057993
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heptahelical transmembrane protein 4-like
translation: MSFEDSMVVSAVAFEKTCSLEGSGESNGMELKEGRIKKRVTKEVKCELVNFDSLPDYFKDNEFILGYYRCEWPLRETILSIFSIHNETLNVWTHLIGFLIFLSLTIFTATMIPREMNVPSMQQSSSQVTEASLPMKQSGVIACLPSPLPVDELETSTPASSIWHLPELLVNCLPKRFSHARNITNPCILISVTDHMANIISQLLMKEVTRWPFFAFLCGAMFCLLTSSICHLIFCHSKRTAYIMLRLDYTGITALIVTSFYPLVYYSFLCEPFYCHLYMSFITAFGLATILVSLVPVFQTAEFRSVRAGLFFCMGVSGLVPIMHKLIAFHHRPEAILSTGYELLMGTFYGLGVVVYATRIPERCMPGKFDIVGHSHQLFHVLVIAGAYAHYLAGLVYLKWRDTEGC
SIO_010081: LOC105057993
subclass of: SO_0000673
so part of: LOC105057993
location: join(5757708..5757985,5758215..5758503,5759015..5759668)
location: region:5757708-5759668:1
so has part: feature:5757708-5757985:1:exon
so has part: feature:5758215-5758503:1:exon
so has part: feature:5759015-5759668:1:exon

XP_019710696.1
type: Protein
SIO_000068: ncbiprotein

position:5757708:1
position: 5757708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5759668:1
position: 5759668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5757708-5757985:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5758215-5758503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5759015-5759668:1:exon

LOC105057994
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5859448..5860350)
location: region:5859448-5860350:-1
so has part: feature:5859448-5860350:-1:exon
subclass of: SO_0000010

105057994
type: Gene
SIO_000068: ncbigene

position:5859448:-1
position: 5859448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5860350:-1
position: 5860350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5859448-5860350:-1:exon

LOC105057994
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057994
product: germin-like protein 3-7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940745.3
SIO_010081: LOC105057994
subclass of: SO_0000673
so part of: LOC105057994
location: complement(5859448..5860350)
location: region:5859448-5860350:-1
so has part: feature:5859448-5860350:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5859448-5860350:-1:exon

LOC105057994
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: germin-like protein 3-7
translation: MESPLNATSPFFLLLFLLLTLLQVPTPCISDPNPLQDFCIPPSPAGKSPGCKDVSAVVSDDFFFDGLAKEGNTNNSFGVGLTQASVVEFPGLNTLGMAIVRIDLAPGGLNPPHSHPRGSELVMVVEGTVLVGFVSTDNVLYQKVAKRGELVIVPKGLVHFQKNMGKGKAVAVAVFDSQFPGVVSSPLSLFRTEPAMDSQLLAKAFRVDGEVISGLLSNFGN
SIO_010081: LOC105057994
subclass of: SO_0000673
so part of: LOC105057994
location: complement(5859668..5860333)
location: region:5859668-5860333:-1
so has part: feature:5859668-5860333:-1:exon

XP_010939047.1
type: Protein
SIO_000068: ncbiprotein

position:5859668:-1
position: 5859668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5860333:-1
position: 5860333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5859668-5860333:-1:exon

LOC105057995
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5938132..5940218)
location: region:5938132-5940218:-1
so has part: feature:5938132-5940218:-1:exon

105057995
type: Gene
SIO_000068: ncbigene

position:5938132:-1
position: 5938132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5940218:-1
position: 5940218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5938132-5940218:-1:exon

LOC105057995
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105057995
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105057995
subclass of: SO_0000673
so part of: LOC105057995
location: complement(5938132..5938239)
location: region:5938132-5938239:-1
so has part: feature:5938132-5938239:-1:exon

position:5938239:-1
position: 5938239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5938132-5938239:-1:exon

LOC105057995
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105057995
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105057995
subclass of: SO_0000673
so part of: LOC105057995
location: complement(5938318..5938518)
location: region:5938318-5938518:-1
so has part: feature:5938318-5938518:-1:exon

position:5938318:-1
position: 5938318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5938518:-1
position: 5938518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5938318-5938518:-1:exon

LOC105057995
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105057995
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105057995
subclass of: SO_0000673
so part of: LOC105057995
location: complement(5938599..5938691)
location: region:5938599-5938691:-1
so has part: feature:5938599-5938691:-1:exon

position:5938599:-1
position: 5938599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5938691:-1
position: 5938691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5938599-5938691:-1:exon

LOC105057995
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105057995
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105057995
subclass of: SO_0000673
so part of: LOC105057995
location: complement(5938794..5938902)
location: region:5938794-5938902:-1
so has part: feature:5938794-5938902:-1:exon

position:5938794:-1
position: 5938794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5938902:-1
position: 5938902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5938794-5938902:-1:exon

LOC105057995
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105057995
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105057995
subclass of: SO_0000673
so part of: LOC105057995
location: complement(5939072..5939158)
location: region:5939072-5939158:-1
so has part: feature:5939072-5939158:-1:exon

position:5939072:-1
position: 5939072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5939158:-1
position: 5939158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5939072-5939158:-1:exon

LOC105057995
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105057995
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105057995
subclass of: SO_0000673
so part of: LOC105057995
location: complement(5939220..5939644)
location: region:5939220-5939644:-1
so has part: feature:5939220-5939644:-1:exon

position:5939220:-1
position: 5939220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5939644:-1
position: 5939644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5939220-5939644:-1:exon

LOC105057995
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105057995
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105057995
subclass of: SO_0000673
so part of: LOC105057995
location: complement(5940201..5940218)
location: region:5940201-5940218:-1
so has part: feature:5940201-5940218:-1:exon

position:5940201:-1
position: 5940201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5940201-5940218:-1:exon

LOC105057970
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057970
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5967308..5969204
location: region:5967308-5969204:1
so has part: feature:5967308-5969204:1:exon
subclass of: SO_0000010

105057970
type: Gene
SIO_000068: ncbigene

position:5967308:1
position: 5967308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5969204:1
position: 5969204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5967308-5969204:1:exon

LOC105057970
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057970
product: galactomannan galactosyltransferase 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940718.3
SIO_010081: LOC105057970
subclass of: SO_0000673
so part of: LOC105057970
location: 5967308..5969204
location: region:5967308-5969204:1
so has part: feature:5967308-5969204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5967308-5969204:1:exon

LOC105057970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057970
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: galactomannan galactosyltransferase 1-like
translation: MMSTDSSPTSPKAPMARPPVCRPLRPTLLADSLVFIAGAFSALLLFWILSSFLSPXPPMTSFPHSPTYTYSSSFSPSLHFANLSIHPDPFNDTDPDLLRDPPDSTFYDDPSLSYTIDHHLSDWDDKRRHWLRLHPWLSPAPGGRERILMISGSQPNPCHNPVGDHLLLRFLKNKIDYCRRHGIELLYNNALQHPKMRTFWAKIPIIRAAMVAHPEADWVWWVDSDAAFTDMDFQLPLRRYRNHNLVLHGWPHLVFQQKSWVGLNAGVFLIRNCQWSLDFMARWARFGPQDPEYEQWGHRLKNEFKDKLFVESDDQSALVHLLNAERDRWADKVFLEDAFYFEGYWIEIVGRFGNMTEKYLAMERKVPPLRRRHAEKVAGVYGRMRDGELEREGAETGPTGWRRPFMTHFTGCQPCSGDHNKKYSGENCYEGMLRALNFADDQVSRDYGFRHTELGGYDVKPLPFDYPAAG
SIO_010081: LOC105057970
subclass of: SO_0000673
so part of: LOC105057970
location: 5967580..5968991
location: region:5967580-5968991:1
so has part: feature:5967580-5968991:1:exon

XP_010939020.1
type: Protein
SIO_000068: ncbiprotein

position:5967580:1
position: 5967580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5968991:1
position: 5968991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5967580-5968991:1:exon

LOC105057971
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6015307..6016713
location: region:6015307-6016713:1
so has part: feature:6015307-6016713:1:exon
subclass of: SO_0000010

105057971
type: Gene
SIO_000068: ncbigene

position:6015307:1
position: 6015307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6016713:1
position: 6016713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6015307-6016713:1:exon

LOC105057971
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057971
product: uncharacterized LOC105057971
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_010940719.3
SIO_010081: LOC105057971
subclass of: SO_0000673
so part of: LOC105057971
location: join(6015307..6015932,6016023..6016112,6016217..6016291,6016460..6016713)
location: region:6015307-6016713:1
so has part: feature:6015307-6015932:1:exon
so has part: feature:6016023-6016112:1:exon
so has part: feature:6016217-6016291:1:exon
so has part: feature:6016460-6016713:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6015307-6015932:1:exon

position:6015932:1
position: 6015932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6016023-6016112:1:exon

position:6016023:1
position: 6016023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6016112:1
position: 6016112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6016217-6016291:1:exon

position:6016217:1
position: 6016217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6016291:1
position: 6016291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6016460-6016713:1:exon

position:6016460:1
position: 6016460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057971
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057971
translation: MMLGWEEEEESSECSSGCQSGWTMYLDQSDEPPTSLPFKVAASIEQEGEEEEEDLSMVSDASSGPPHFPEEDENHYYSHPNTCYNGNGCLFYASTLPTASAAPLANNGGKRRRVEGKEQRESSSPLDDTASSPLFSFPNTSFNATSNNVKPSMENVLEFSCGFSATHFKGKSALHKQMGYLHSSAPATPTPARPVCRDESERKIW
SIO_010081: LOC105057971
subclass of: SO_0000673
so part of: LOC105057971
location: join(6015516..6015932,6016023..6016112,6016217..6016291,6016460..6016495)
location: region:6015516-6016495:1
so has part: feature:6015516-6015932:1:exon
so has part: feature:6016023-6016112:1:exon
so has part: feature:6016217-6016291:1:exon
so has part: feature:6016460-6016495:1:exon

XP_010939021.1
type: Protein
SIO_000068: ncbiprotein

position:6015516:1
position: 6015516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6016495:1
position: 6016495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6015516-6015932:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6016023-6016112:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6016217-6016291:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6016460-6016495:1:exon

LOC105057972
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6022473..6054038)
location: region:6022473-6054038:-1
so has part: feature:6022473-6054038:-1:exon
subclass of: SO_0000010

105057972
type: Gene
SIO_000068: ncbigene

position:6022473:-1
position: 6022473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6054038:-1
position: 6054038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6022473-6054038:-1:exon

LOC105057972
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057972
product: ruvB-like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_010940720.2
SIO_010081: LOC105057972
subclass of: SO_0000673
so part of: LOC105057972
location: complement(join(6022473..6023314,6053145..6054038))
location: region:6022473-6054038:-1
so has part: feature:6053145-6054038:-1:exon
so has part: feature:6022473-6023314:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6053145-6054038:-1:exon

position:6053145:-1
position: 6053145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6022473-6023314:-1:exon

position:6023314:-1
position: 6023314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057972
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ruvB-like 2
translation: MAELKKLSESRDLTRIERIGAHSHIRGLGLDSSLEARAVSEGMVGQQSARKAAGLILQLIREGKIAGRAILLAGQPGTGKTAIAMGLAKSLGQETPFATVSGSELFSLEMSKTEALTQAFRRAIGVRIKEEAEIIEGEVVEITIDRPAATAGGSASGSSGQSSSAFKTGKLTLKTTDMETVYDLGNKMIEALTKEKVQSGDVIALDKVSGKVTKLGRSIGRSRDYDAVGPNTKFVRCPEGELQKRKEVVHCVTLHEIDVINSRTQGFLALFTGDTGEIRSEVREQIDTKVAEWREEGKAEIVPGVLFIDEVHMLDIECFSFLNRALENDMAPILVIATNRGITTIRGTNYRSPHGIPPDFLDRLLIISTQPYTEEEIRKILDIRCEEEDVEMSKDAKVLLTKIGAETSLRYAINLITAAALACQKRRGKIVEMEDISRAYQLFLDVKRSTQYLMEYQSQYMFNEVPREVDEDETMQS
SIO_010081: LOC105057972
subclass of: SO_0000673
so part of: LOC105057972
location: complement(join(6022669..6023314,6053145..6053932))
location: region:6022669-6053932:-1
so has part: feature:6053145-6053932:-1:exon
so has part: feature:6022669-6023314:-1:exon

XP_010939022.1
type: Protein
SIO_000068: ncbiprotein

position:6022669:-1
position: 6022669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6053932:-1
position: 6053932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6053145-6053932:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6022669-6023314:-1:exon

LOC105057973
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6101197..6127219)
location: region:6101197-6127219:-1
so has part: feature:6101197-6127219:-1:exon
subclass of: SO_0000010

105057973
type: Gene
SIO_000068: ncbigene

position:6101197:-1
position: 6101197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6127219:-1
position: 6127219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6101197-6127219:-1:exon

LOC105057973
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057973
product: pentatricopeptide repeat-containing protein At2g01390
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_010940721.3
SIO_010081: LOC105057973
subclass of: SO_0000673
so part of: LOC105057973
location: complement(join(6101197..6103152,6126458..6127219))
location: region:6101197-6127219:-1
so has part: feature:6126458-6127219:-1:exon
so has part: feature:6101197-6103152:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6126458-6127219:-1:exon

position:6126458:-1
position: 6126458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6101197-6103152:-1:exon

position:6103152:-1
position: 6103152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057973
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At2g01390
translation: MPSPAPHGRAFATLLSNHPKKKPSPRSNPFKTLNPRSKISPKPDPKPPELVYMRSTIHKISSILRYSPWEDAQTELRRLPVRWDSFTVNRVLKTHPPMEKAWLFFNWAARLPGFKHDQFTYTTMLDIFGEAGRMSSMWHVFDEMREKGIAIDAATYTSLMHWLSKDGDLEGAVRAWDEMMRQRCRPTIVSYTALMKILFDHDRPKEAAAVYREILEVGLTPNCHTYTVLMEYLAGAGKFKAALEVMSKMQEAGVQPDKATCNILVQKCSKAGETSAMTQILRYMKEHSIVLRRAVYLEALEALKINGESDHLLQEVNPHLSFEGIEDDLDSEPSGPESASLIDRGIILNLLARQNLIAVELILSEMTNKDIKMDSELISAVVQSSCADCRPSCAVAAFNYCLKMRKNLDRSAYTSLLGLFLRINAFEKVLGIVEEMIKAGTSFGTYLVSLLIYKLGCAGLSASATKIFYSLPMDQNVVTCTALMDAYFRAGEVDKSLELFADMKRKGIHISFGTYDVLIVGLERAGKISDAVVYRKEKRRFRWREHPQGVSTEECLCNCLFGAD
SIO_010081: LOC105057973
subclass of: SO_0000673
so part of: LOC105057973
location: complement(join(6102167..6103152,6126458..6127166))
location: region:6102167-6127166:-1
so has part: feature:6126458-6127166:-1:exon
so has part: feature:6102167-6103152:-1:exon

XP_010939023.2
type: Protein
SIO_000068: ncbiprotein

position:6102167:-1
position: 6102167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6127166:-1
position: 6127166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6126458-6127166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6102167-6103152:-1:exon

LOC105057974
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6248176..6253635)
location: region:6248176-6253635:-1
so has part: feature:6248176-6253635:-1:exon
subclass of: SO_0000010

105057974
type: Gene
SIO_000068: ncbigene

position:6248176:-1
position: 6248176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6253635:-1
position: 6253635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6248176-6253635:-1:exon

LOC105057974
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057974
product: uncharacterized LOC105057974, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_010940723.2
SIO_010081: LOC105057974
subclass of: SO_0000673
so part of: LOC105057974
location: complement(join(6248176..6248528,6248660..6248728,6248890..6248952,6249443..6249582,6250451..6250577,6253100..6253635))
location: region:6248176-6253635:-1
so has part: feature:6253100-6253635:-1:exon
so has part: feature:6250451-6250577:-1:exon
so has part: feature:6249443-6249582:-1:exon
so has part: feature:6248890-6248952:-1:exon
so has part: feature:6248660-6248728:-1:exon
so has part: feature:6248176-6248528:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6253100-6253635:-1:exon

position:6253100:-1
position: 6253100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6250451-6250577:-1:exon

position:6250451:-1
position: 6250451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6250577:-1
position: 6250577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6249443-6249582:-1:exon

position:6249443:-1
position: 6249443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6249582:-1
position: 6249582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6248890-6248952:-1:exon

position:6248890:-1
position: 6248890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6248952:-1
position: 6248952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6248660-6248728:-1:exon

position:6248660:-1
position: 6248660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6248728:-1
position: 6248728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6248176-6248528:-1:exon

position:6248528:-1
position: 6248528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057974
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057974
product: uncharacterized LOC105057974, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_010940722.2
SIO_010081: LOC105057974
subclass of: SO_0000673
so part of: LOC105057974
location: complement(join(6248176..6248528,6248660..6248728,6248890..6248952,6249443..6249591,6250451..6250577,6253100..6253635))
location: region:6248176-6253635:-1
so has part: feature:6253100-6253635:-1:exon
so has part: feature:6250451-6250577:-1:exon
so has part: feature:6249443-6249591:-1:exon
so has part: feature:6248890-6248952:-1:exon
so has part: feature:6248660-6248728:-1:exon
so has part: feature:6248176-6248528:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6253100-6253635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6250451-6250577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6249443-6249591:-1:exon

position:6249591:-1
position: 6249591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6248890-6248952:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6248660-6248728:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6248176-6248528:-1:exon

LOC105057974
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057974 isoform X2
translation: MLEAVAGEMNGGYGQTQQSCGESSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGHEEEDETECENMQWNVSDMASDDTQLQKPHRSRSRQHKGSSNKSSSRTHSCDSQSKGSVSSSRGITKVDLSKLETTALWRYWRHFNLVDASPNPSKEQLIDAVQRHFMSQQLDELQVIVGFVQAAKRLKTVCN
SIO_010081: LOC105057974
subclass of: SO_0000673
so part of: LOC105057974
location: complement(join(6248457..6248528,6248660..6248728,6248890..6248952,6249443..6249582,6250451..6250577,6253100..6253303))
location: region:6248457-6253303:-1
so has part: feature:6253100-6253303:-1:exon
so has part: feature:6250451-6250577:-1:exon
so has part: feature:6249443-6249582:-1:exon
so has part: feature:6248890-6248952:-1:exon
so has part: feature:6248660-6248728:-1:exon
so has part: feature:6248457-6248528:-1:exon

XP_010939025.1
type: Protein
SIO_000068: ncbiprotein

position:6248457:-1
position: 6248457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6253303:-1
position: 6253303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6253100-6253303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6250451-6250577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6249443-6249582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6248890-6248952:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6248660-6248728:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6248457-6248528:-1:exon

LOC105057974
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105057974 isoform X1
translation: MLEAVAGEMNGGYGQTQQSCGESSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGHEEEDETECENMQWNVSDMVHAASDDTQLQKPHRSRSRQHKGSSNKSSSRTHSCDSQSKGSVSSSRGITKVDLSKLETTALWRYWRHFNLVDASPNPSKEQLIDAVQRHFMSQQLDELQVIVGFVQAAKRLKTVCN
SIO_010081: LOC105057974
subclass of: SO_0000673
so part of: LOC105057974
location: complement(join(6248457..6248528,6248660..6248728,6248890..6248952,6249443..6249591,6250451..6250577,6253100..6253303))
location: region:6248457-6253303:-1
so has part: feature:6253100-6253303:-1:exon
so has part: feature:6250451-6250577:-1:exon
so has part: feature:6249443-6249591:-1:exon
so has part: feature:6248890-6248952:-1:exon
so has part: feature:6248660-6248728:-1:exon
so has part: feature:6248457-6248528:-1:exon

XP_010939024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6253100-6253303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6250451-6250577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6249443-6249591:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6248890-6248952:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6248660-6248728:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6248457-6248528:-1:exon

LOC105057976
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057976
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6291250..6293228)
location: region:6291250-6293228:-1
so has part: feature:6291250-6293228:-1:exon
subclass of: SO_0000010

105057976
type: Gene
SIO_000068: ncbigene

position:6291250:-1
position: 6291250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6293228:-1
position: 6293228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6291250-6293228:-1:exon

LOC105057976
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057976
product: UPF0496 protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940724.3
SIO_010081: LOC105057976
subclass of: SO_0000673
so part of: LOC105057976
location: complement(6291250..6293228)
location: region:6291250-6293228:-1
so has part: feature:6291250-6293228:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6291250-6293228:-1:exon

LOC105057976
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057976
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0496 protein 1
translation: MGGQLSRRPGTPPVVHVDGGATTSAGGRGGMEYLAELSSYEAACRLDPELQSFDTTFQQRTSRVISTLALGVEVRSLSFNSLKEVTGCLLEMNQEVVKVILECKKDIWKNPELFDLVEEYFESSLQTLDFCTALEKCLKKARDSQLIIHVALQHFEEEEEVVEEDSKKKYLKTLEELRHFKAAGDPFTEEFFQVFQSVYRQQLSMFEKLQQRKNKVDKKLKSIKAWRKVSSIIFVATFATILICSVVAAAVAAPPVAAALAAAASIPVGSMGKWIDSLLKGYQQAVKGQKEILSSMQVGTYIMIKDLDSIRVLIDRLEIQINALLDNADFALRDEEAVKFGIEEIKKKLEVFMKSIEDLGEQADRCSRDIRRARTVVLQRIIRHPK
SIO_010081: LOC105057976
subclass of: SO_0000673
so part of: LOC105057976
location: complement(6291420..6292580)
location: region:6291420-6292580:-1
so has part: feature:6291420-6292580:-1:exon

XP_010939026.1
type: Protein
SIO_000068: ncbiprotein

position:6291420:-1
position: 6291420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6292580:-1
position: 6292580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6291420-6292580:-1:exon

LOC105057977
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6318001..6327222)
location: region:6318001-6327222:-1
so has part: feature:6318001-6327222:-1:exon
subclass of: SO_0000010

105057977
type: Gene
SIO_000068: ncbigene

position:6318001:-1
position: 6318001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6327222:-1
position: 6327222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6318001-6327222:-1:exon

LOC105057977
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057977
product: NAC domain-containing protein 96, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_010940726.3
SIO_010081: LOC105057977
subclass of: SO_0000673
so part of: LOC105057977
location: complement(join(6318001..6318822,6320014..6320120,6320872..6321214,6321669..6321845,6321957..6322204,6326196..6326385,6327103..6327222))
location: region:6318001-6327222:-1
so has part: feature:6327103-6327222:-1:exon
so has part: feature:6326196-6326385:-1:exon
so has part: feature:6321957-6322204:-1:exon
so has part: feature:6321669-6321845:-1:exon
so has part: feature:6320872-6321214:-1:exon
so has part: feature:6320014-6320120:-1:exon
so has part: feature:6318001-6318822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6327103-6327222:-1:exon

position:6327103:-1
position: 6327103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6326196-6326385:-1:exon

position:6326196:-1
position: 6326196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6326385:-1
position: 6326385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6321957-6322204:-1:exon

position:6321957:-1
position: 6321957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6322204:-1
position: 6322204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6321669-6321845:-1:exon

position:6321669:-1
position: 6321669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6321845:-1
position: 6321845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6320872-6321214:-1:exon

position:6320872:-1
position: 6320872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6321214:-1
position: 6321214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6320014-6320120:-1:exon

position:6320014:-1
position: 6320014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6320120:-1
position: 6320120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6318001-6318822:-1:exon

position:6318822:-1
position: 6318822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057977
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057977
product: NAC domain-containing protein 96, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_010940727.3
SIO_010081: LOC105057977
subclass of: SO_0000673
so part of: LOC105057977
location: complement(join(6318001..6318822,6320872..6321214,6321669..6321845,6321957..6322207,6326196..6326385,6327103..6327222))
location: region:6318001-6327222:-1
so has part: feature:6327103-6327222:-1:exon
so has part: feature:6326196-6326385:-1:exon
so has part: feature:6321957-6322207:-1:exon
so has part: feature:6321669-6321845:-1:exon
so has part: feature:6320872-6321214:-1:exon
so has part: feature:6318001-6318822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6327103-6327222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6326196-6326385:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6321957-6322207:-1:exon

position:6322207:-1
position: 6322207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6321669-6321845:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6320872-6321214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6318001-6318822:-1:exon

LOC105057977
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057977
product: NAC domain-containing protein 96, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_010940725.3
SIO_010081: LOC105057977
subclass of: SO_0000673
so part of: LOC105057977
location: complement(join(6318001..6318822,6320014..6320120,6320872..6321214,6321669..6321845,6321957..6322207,6326196..6326385,6327103..6327222))
location: region:6318001-6327222:-1
so has part: feature:6327103-6327222:-1:exon
so has part: feature:6326196-6326385:-1:exon
so has part: feature:6321957-6322207:-1:exon
so has part: feature:6321669-6321845:-1:exon
so has part: feature:6320872-6321214:-1:exon
so has part: feature:6320014-6320120:-1:exon
so has part: feature:6318001-6318822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6327103-6327222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6326196-6326385:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6321957-6322207:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6321669-6321845:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6320872-6321214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6320014-6320120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6318001-6318822:-1:exon

LOC105057977
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057977
product: NAC domain-containing protein 96, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_019855221.1
SIO_010081: LOC105057977
subclass of: SO_0000673
so part of: LOC105057977
location: complement(join(6318001..6318822,6320014..6320120,6320872..6321214,6321669..6321845,6321957..6322207,6326132..6326276))
location: region:6318001-6326276:-1
so has part: feature:6326132-6326276:-1:exon
so has part: feature:6321957-6322207:-1:exon
so has part: feature:6321669-6321845:-1:exon
so has part: feature:6320872-6321214:-1:exon
so has part: feature:6320014-6320120:-1:exon
so has part: feature:6318001-6318822:-1:exon

position:6326276:-1
position: 6326276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6326132-6326276:-1:exon

position:6326132:-1
position: 6326132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6321957-6322207:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6321669-6321845:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6320872-6321214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6320014-6320120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6318001-6318822:-1:exon

LOC105057977
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAC domain-containing protein 96 isoform X3
translation: MCPSAPFSVPLDINASSTDEELVLFVGGRKFGDPVPDNVITEVSPFSVEPWNSPEDMWYLYNPDDPQSLNGECEIKVTRTGYWKPMGGLRIFTSTPTVGRKTTREFYIGKAPNGDKTGWTMHEYQTEQKTHQGINKEQDHCSLYRVFFQINERPNHEEQHNSMIADAADGDYLEHVLLNLLEQENNSSSSGAGNRSQMVGRDQQGQSVLSGTSVTGPETDSSAEDVYATCDFSKGDYLELNDLYSPGTSSSSSDNSSLMSVNSDEYFDADALLRDLENEHNPRVEEEHADCRYSVSASVKSNQVVIRPPPSGSVCGNSSSNLVAEGGAFANPMPERAWASGPSSSAYELSHNRKASSSGKSPGSDSDQSSSGSSRGSRTSRGQGLKTVGRIAKLGKYYCCCGSF
SIO_010081: LOC105057977
subclass of: SO_0000673
so part of: LOC105057977
location: complement(join(6318542..6318822,6320872..6321214,6321669..6321845,6321957..6322207,6326196..6326358))
location: region:6318542-6326358:-1
so has part: feature:6326196-6326358:-1:exon
so has part: feature:6321957-6322207:-1:exon
so has part: feature:6321669-6321845:-1:exon
so has part: feature:6320872-6321214:-1:exon
so has part: feature:6318542-6318822:-1:exon

XP_010939029.1
type: Protein
SIO_000068: ncbiprotein

position:6318542:-1
position: 6318542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6326358:-1
position: 6326358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6326196-6326358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6321957-6322207:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6321669-6321845:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6320872-6321214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6318542-6318822:-1:exon

LOC105057977
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAC domain-containing protein 35 isoform X2
translation: MCPSAPFSVPLDINASSTDEELVLFVGGRKFGDPVPDNVITEVSPFSVEPWNSPDMWYLYNPDDPQSLNGECEIKVTRTGYWKPMGGLRIFTSTPTVGRKTTREFYIGKAPNGDKTGWTMHEYQTEQKTHQGINKEQDHCSLYRVFFQINERPNHEEQHNSMIADAADGDYLEHVLLNLLEQENNSSSSGAGNRSQMVGRDQQGQSVLSGTSVTGPETDSSAEDVYATCDFSKGDYLELNDLYSPGTSSSSSDNSSLMSVNSDEYFDADALLRDLENEHNPRVEEEHADCRYSVSASVKSNQVVIRPPPSDAYVAQPFELPNILGLVIQQILFFELKTCHSLIALNAQFAVTVAVIWWQKGAHLPIQCLKGHGLPALPLLLMSYLITGRLLVQANLQVVIQTNLLPVVHVAAGLPEVRD
SIO_010081: LOC105057977
subclass of: SO_0000673
so part of: LOC105057977
location: complement(join(6318601..6318822,6320014..6320120,6320872..6321214,6321669..6321845,6321957..6322204,6326196..6326358))
location: region:6318601-6326358:-1
so has part: feature:6326196-6326358:-1:exon
so has part: feature:6321957-6322204:-1:exon
so has part: feature:6321669-6321845:-1:exon
so has part: feature:6320872-6321214:-1:exon
so has part: feature:6320014-6320120:-1:exon
so has part: feature:6318601-6318822:-1:exon

XP_010939028.1
type: Protein
SIO_000068: ncbiprotein

position:6318601:-1
position: 6318601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6326196-6326358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6321957-6322204:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6321669-6321845:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6320872-6321214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6320014-6320120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6318601-6318822:-1:exon

LOC105057977
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAC domain-containing protein 35 isoform X1
translation: MCPSAPFSVPLDINASSTDEELVLFVGGRKFGDPVPDNVITEVSPFSVEPWNSPEDMWYLYNPDDPQSLNGECEIKVTRTGYWKPMGGLRIFTSTPTVGRKTTREFYIGKAPNGDKTGWTMHEYQTEQKTHQGINKEQDHCSLYRVFFQINERPNHEEQHNSMIADAADGDYLEHVLLNLLEQENNSSSSGAGNRSQMVGRDQQGQSVLSGTSVTGPETDSSAEDVYATCDFSKGDYLELNDLYSPGTSSSSSDNSSLMSVNSDEYFDADALLRDLENEHNPRVEEEHADCRYSVSASVKSNQVVIRPPPSDAYVAQPFELPNILGLVIQQILFFELKTCHSLIALNAQFAVTVAVIWWQKGAHLPIQCLKGHGLPALPLLLMSYLITGRLLVQANLQVVIQTNLLPVVHVAAGLPEVRD
SIO_010081: LOC105057977
subclass of: SO_0000673
so part of: LOC105057977
location: complement(join(6318601..6318822,6320014..6320120,6320872..6321214,6321669..6321845,6321957..6322207,6326196..6326358))
location: region:6318601-6326358:-1
so has part: feature:6326196-6326358:-1:exon
so has part: feature:6321957-6322207:-1:exon
so has part: feature:6321669-6321845:-1:exon
so has part: feature:6320872-6321214:-1:exon
so has part: feature:6320014-6320120:-1:exon
so has part: feature:6318601-6318822:-1:exon

XP_010939027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6326196-6326358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6321957-6322207:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6321669-6321845:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6320872-6321214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6320014-6320120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6318601-6318822:-1:exon

LOC105057977
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAC domain-containing protein 13 isoform X4
translation: MWYLYNPDDPQSLNGECEIKVTRTGYWKPMGGLRIFTSTPTVGRKTTREFYIGKAPNGDKTGWTMHEYQTEQKTHQGINKEQDHCSLYRVFFQINERPNHEEQHNSMIADAADGDYLEHVLLNLLEQENNSSSSGAGNRSQMVGRDQQGQSVLSGTSVTGPETDSSAEDVYATCDFSKGDYLELNDLYSPGTSSSSSDNSSLMSVNSDEYFDADALLRDLENEHNPRVEEEHADCRYSVSASVKSNQVVIRPPPSDAYVAQPFELPNILGLVIQQILFFELKTCHSLIALNAQFAVTVAVIWWQKGAHLPIQCLKGHGLPALPLLLMSYLITGRLLVQANLQVVIQTNLLPVVHVAAGLPEVRD
SIO_010081: LOC105057977
subclass of: SO_0000673
so part of: LOC105057977
location: complement(join(6318601..6318822,6320014..6320120,6320872..6321214,6321669..6321845,6321957..6322202))
location: region:6318601-6322202:-1
so has part: feature:6321957-6322202:-1:exon
so has part: feature:6321669-6321845:-1:exon
so has part: feature:6320872-6321214:-1:exon
so has part: feature:6320014-6320120:-1:exon
so has part: feature:6318601-6318822:-1:exon

XP_019710780.1
type: Protein
SIO_000068: ncbiprotein

position:6322202:-1
position: 6322202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6321957-6322202:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6321669-6321845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6320872-6321214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6320014-6320120:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6318601-6318822:-1:exon

LOC105057978
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6373346..6381475
location: region:6373346-6381475:1
so has part: feature:6373346-6381475:1:exon
subclass of: SO_0000010

105057978
type: Gene
SIO_000068: ncbigene

position:6373346:1
position: 6373346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6381475:1
position: 6381475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6373346-6381475:1:exon

LOC105057978
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057978
product: protein YIF1B-B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_010940732.3
SIO_010081: LOC105057978
subclass of: SO_0000673
so part of: LOC105057978
location: join(6373346..6373505,6380048..6380230,6380350..6380448,6380545..6380696,6380769..6381475)
location: region:6373346-6381475:1
so has part: feature:6373346-6373505:1:exon
so has part: feature:6380048-6380230:1:exon
so has part: feature:6380350-6380448:1:exon
so has part: feature:6380545-6380696:1:exon
so has part: feature:6380769-6381475:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6373346-6373505:1:exon

position:6373505:1
position: 6373505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6380048-6380230:1:exon

position:6380048:1
position: 6380048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6380230:1
position: 6380230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6380350-6380448:1:exon

position:6380350:1
position: 6380350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6380448:1
position: 6380448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6380545-6380696:1:exon

position:6380545:1
position: 6380545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6380696:1
position: 6380696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6380769-6381475:1:exon

position:6380769:1
position: 6380769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057978
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein YIF1B-B
translation: MNGSLGNQSGMQGPPPNPFGNAFYGTGSGLIRGGLGAYGEKFLGSSSEFMQSNISQYLSDPQYYFQVNGQYVRNKLKVILFPFLHRGHWTRITEPVGGRLAYKPPVHDINAPDLYIPLMAFGTYVVLSGFSLGVFGRFTPEALSLQFTKGLAGWFFHILLLKGLLYSLGSGEAPLLDIVAYAGYGFAGLSLAVLARIFWSYSYYFLLPWMCVCMAVFLVKTMKRVLLGGARGYEKHSTRHHYLLLFMAAVQFPLLFWLGNVSG
SIO_010081: LOC105057978
subclass of: SO_0000673
so part of: LOC105057978
location: join(6380072..6380230,6380350..6380448,6380545..6380696,6380769..6381150)
location: region:6380072-6381150:1
so has part: feature:6380072-6380230:1:exon
so has part: feature:6380350-6380448:1:exon
so has part: feature:6380545-6380696:1:exon
so has part: feature:6380769-6381150:1:exon

XP_010939034.1
type: Protein
SIO_000068: ncbiprotein

position:6380072:1
position: 6380072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6381150:1
position: 6381150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6380072-6380230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6380350-6380448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6380545-6380696:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6380769-6381150:1:exon

LOC105057979
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057979
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6409131..6415494
location: region:6409131-6415494:1
so has part: feature:6409131-6415494:1:exon
subclass of: SO_0000010

105057979
type: Gene
SIO_000068: ncbigene

position:6409131:1
position: 6409131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6415494:1
position: 6415494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6409131-6415494:1:exon

LOC105057979
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057979
product: UDP-rhamnose/UDP-galactose transporter 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_010940733.3
SIO_010081: LOC105057979
subclass of: SO_0000673
so part of: LOC105057979
location: join(6409131..6409647,6410180..6410364,6410460..6410660,6413788..6413949,6414872..6415494)
location: region:6409131-6415494:1
so has part: feature:6409131-6409647:1:exon
so has part: feature:6410180-6410364:1:exon
so has part: feature:6410460-6410660:1:exon
so has part: feature:6413788-6413949:1:exon
so has part: feature:6414872-6415494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6409131-6409647:1:exon

position:6409647:1
position: 6409647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6410180-6410364:1:exon

position:6410180:1
position: 6410180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6410364:1
position: 6410364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6410460-6410660:1:exon

position:6410460:1
position: 6410460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6410660:1
position: 6410660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6413788-6413949:1:exon

position:6413788:1
position: 6413788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6413949:1
position: 6413949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6414872-6415494:1:exon

position:6414872:1
position: 6414872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057979
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057979
product: UDP-rhamnose/UDP-galactose transporter 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_010940734.3
SIO_010081: LOC105057979
subclass of: SO_0000673
so part of: LOC105057979
location: join(6409131..6409318,6409439..6409647,6410180..6410364,6410460..6410660,6413788..6413949,6414872..6415494)
location: region:6409131-6415494:1
so has part: feature:6409131-6409318:1:exon
so has part: feature:6409439-6409647:1:exon
so has part: feature:6410180-6410364:1:exon
so has part: feature:6410460-6410660:1:exon
so has part: feature:6413788-6413949:1:exon
so has part: feature:6414872-6415494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6409131-6409318:1:exon

position:6409318:1
position: 6409318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6409439-6409647:1:exon

position:6409439:1
position: 6409439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6410180-6410364:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6410460-6410660:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6413788-6413949:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6414872-6415494:1:exon

LOC105057979
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057979
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-rhamnose/UDP-galactose transporter 2
translation: MEMEKKVVVSDMGAWAMNVVSSVGLIMANKQLMSAGGYGFSFATTLTGFHFTLTGIIGYLSNASGLSTSKRVPLWELLWFSVVANLSITGMNLSLMLNSVGFYQISKLSMIPMVCMMEWLLHSKNYSLRVIMSVIVVAFGVGVCTVTDVEINAKGFLCACVAVFCTSLQQITVGSFQKKYNIGSFDLLSQTAPVQAISLLLFGPFADYYLNRKSLLKYHFSTGATLFILLSCSLSVFCNISQYLCIGRFSATSFQVLGHMKTVCVLILGWILFDSVLAVKNVLGMLLAVVGMIVYSWAVEQEKQAKLASHVKSDRASDEEDASLLKEKVNSLPESDLKFGQTKS
SIO_010081: LOC105057979
subclass of: SO_0000673
so part of: LOC105057979
location: join(6409521..6409647,6410180..6410364,6410460..6410660,6413788..6413949,6414872..6415231)
location: region:6409521-6415231:1
so has part: feature:6409521-6409647:1:exon
so has part: feature:6410180-6410364:1:exon
so has part: feature:6410460-6410660:1:exon
so has part: feature:6413788-6413949:1:exon
so has part: feature:6414872-6415231:1:exon

XP_010939035.1
type: Protein
SIO_000068: ncbiprotein

position:6409521:1
position: 6409521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6415231:1
position: 6415231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6409521-6409647:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6410180-6410364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6410460-6410660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6413788-6413949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6414872-6415231:1:exon

LOC105057979
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057979
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-rhamnose/UDP-galactose transporter 2
translation: MEMEKKVVVSDMGAWAMNVVSSVGLIMANKQLMSAGGYGFSFATTLTGFHFTLTGIIGYLSNASGLSTSKRVPLWELLWFSVVANLSITGMNLSLMLNSVGFYQISKLSMIPMVCMMEWLLHSKNYSLRVIMSVIVVAFGVGVCTVTDVEINAKGFLCACVAVFCTSLQQITVGSFQKKYNIGSFDLLSQTAPVQAISLLLFGPFADYYLNRKSLLKYHFSTGATLFILLSCSLSVFCNISQYLCIGRFSATSFQVLGHMKTVCVLILGWILFDSVLAVKNVLGMLLAVVGMIVYSWAVEQEKQAKLASHVKSDRASDEEDASLLKEKVNSLPESDLKFGQTKS
SIO_010081: LOC105057979
subclass of: SO_0000673
so part of: LOC105057979
location: join(6409521..6409647,6410180..6410364,6410460..6410660,6413788..6413949,6414872..6415231)
location: region:6409521-6415231:1
so has part: feature:6409521-6409647:1:exon
so has part: feature:6410180-6410364:1:exon
so has part: feature:6410460-6410660:1:exon
so has part: feature:6413788-6413949:1:exon
so has part: feature:6414872-6415231:1:exon

XP_010939036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6409521-6409647:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6410180-6410364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6410460-6410660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6413788-6413949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6414872-6415231:1:exon

LOC105057980
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057980
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6660586..6662340
location: region:6660586-6662340:1
so has part: feature:6660586-6662340:1:exon
subclass of: SO_0000010

105057980
type: Gene
SIO_000068: ncbigene

position:6660586:1
position: 6660586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6662340:1
position: 6662340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6660586-6662340:1:exon

LOC105057980
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057980
product: geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_010940735.3
SIO_010081: LOC105057980
subclass of: SO_0000673
so part of: LOC105057980
location: join(6660586..6660814,6660912..6662340)
location: region:6660586-6662340:1
so has part: feature:6660586-6660814:1:exon
so has part: feature:6660912-6662340:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6660586-6660814:1:exon

position:6660814:1
position: 6660814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6660912-6662340:1:exon

position:6660912:1
position: 6660912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057980
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic
translation: MTSFAHFLCSPVGSWAHLSTRSSSFLSPSLPSPPSSASASAPSTRRRRPARAAMEVNAAASAAAPSAVEFNFKGYMLQKAAAVNQALDAVVPLVYPERIHEAMRYSLLGGGKRVRPVLCLAACEIVGGRERQAMPPATALEMIHTMSLIHDDLPCMDNDDLRRGQPTNHCVFGEPLAVLAGDALLALAFGRLADPASYPADDPVPPARVVRAVGELSHCIGAEGLVAGQVVDMESTGLGIPVGLDRLEFIHLHKTAALLEASVVIGAIVGGGSDNQIERLRRYARCVGLLFQVVDDILDVTKSSQELGKTAGKDLASDKTTYPKLMGLEKSREFAEELLKDAKDQLSEFDPIKAAPLLHLADYIAHRQK
SIO_010081: LOC105057980
subclass of: SO_0000673
so part of: LOC105057980
location: 6660954..6662063
location: region:6660954-6662063:1
so has part: feature:6660954-6662063:1:exon

XP_010939037.1
type: Protein
SIO_000068: ncbiprotein

position:6660954:1
position: 6660954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6662063:1
position: 6662063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6660954-6662063:1:exon

LOC105057996
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057996
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6690925..6701450)
location: region:6690925-6701450:-1
so has part: feature:6690925-6701450:-1:exon
subclass of: SO_0000010

105057996
type: Gene
SIO_000068: ncbigene

position:6690925:-1
position: 6690925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6701450:-1
position: 6701450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6690925-6701450:-1:exon

LOC105057996
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057996
product: UPF0481 protein At3g47200-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940746.2
SIO_010081: LOC105057996
subclass of: SO_0000673
so part of: LOC105057996
location: complement(join(6690925..6691290,6699419..6699545,6700069..6701450))
location: region:6690925-6701450:-1
so has part: feature:6700069-6701450:-1:exon
so has part: feature:6699419-6699545:-1:exon
so has part: feature:6690925-6691290:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6700069-6701450:-1:exon

position:6700069:-1
position: 6700069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6699419-6699545:-1:exon

position:6699419:-1
position: 6699419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6699545:-1
position: 6699545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6690925-6691290:-1:exon

position:6691290:-1
position: 6691290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105057996
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057996
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0481 protein At3g47200-like
translation: MATGNGVPDIMEENVDSSSVHDNREASWIRELRGNIQAASIWTPPWENQEQAREESTTNPSIFSVPASFREQSPERYQPKVVAIGPYHRGNSKLLIENKVKMWCVNRFISRHSLNLQQWLLDMTSREKEARSYYSEDVSMDSRSFLEMLLLDGCFILMAFKAMESLTFDPKWPSDQIMLDLLVLENQIPFFVLVLLCNGIGGEEGFRKFAELDDAGTFIHYVLRSLDQTHMIGNLNPSILREQVLHLLHLFRLSLHPSTFERGGFETINVAKQNIIAQIFRTPTCVPSATELQYWSAVKFKKHSGGILDISFCNGVMKIPFLEINDGNQTILHNLIAFEQCYHPHVERHVTTYAAFMNCLINKEGDAGLLERRGILLNRLPTSNDAAFFFSKLSPTAKVSPIYLKSLIDEVNRYHKKKRHRWCADLKLNHFSNPRLIMSVLAATVLLILTFMQTYYSALGWPQLRSQGVQKVVDKGYEEHQEKLWLNQAQKGALERNRKKDLMMRARILATDIRSHAAKKRTVIDAGPFRLSRKNRIATPSVLTREPDVPSKTASEPILILSTPTMLLPTEVSFTRVEMVRDEEVAAKSSAAPLMGVQVGSKVMAKSEQSVAAPAVPLVERSRA
SIO_010081: LOC105057996
subclass of: SO_0000673
so part of: LOC105057996
location: complement(join(6690925..6691290,6699419..6699545,6700069..6701450))
location: region:6690925-6701450:-1
so has part: feature:6700069-6701450:-1:exon
so has part: feature:6699419-6699545:-1:exon
so has part: feature:6690925-6691290:-1:exon

XP_010939048.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6700069-6701450:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6699419-6699545:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6690925-6691290:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 51953
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 6905184..6905283
location: region:6905184-6905283:1
so has part: feature:6905184-6905283:1:region

position:6905184:1
position: 6905184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6905283:1
position: 6905283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6905184-6905283:1:region

LOC105057998
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6906664..6912014
location: region:6906664-6912014:1
so has part: feature:6906664-6912014:1:exon
subclass of: SO_0000010

105057998
type: Gene
SIO_000068: ncbigene

position:6906664:1
position: 6906664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6912014:1
position: 6912014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6906664-6912014:1:exon

LOC105057998
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057998
product: zinc finger BED domain-containing protein RICESLEEPER 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029268353.1
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: join(6906664..6907255,6907687..6907764,6907963..6911511,6911734..6912014)
location: region:6906664-6912014:1
so has part: feature:6906664-6907255:1:exon
so has part: feature:6907687-6907764:1:exon
so has part: feature:6907963-6911511:1:exon
so has part: feature:6911734-6912014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6906664-6907255:1:exon

position:6907255:1
position: 6907255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6907687-6907764:1:exon

position:6907687:1
position: 6907687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6907764:1
position: 6907764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6907963-6911511:1:exon

position:6907963:1
position: 6907963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6911511:1
position: 6911511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6911734-6912014:1:exon

position:6911734:1
position: 6911734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105057998
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057998
product: zinc finger BED domain-containing protein RICESLEEPER 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_029268351.1
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: join(6906664..6907255,6907698..6907764,6907963..6911511,6911734..6912014)
location: region:6906664-6912014:1
so has part: feature:6906664-6907255:1:exon
so has part: feature:6907698-6907764:1:exon
so has part: feature:6907963-6911511:1:exon
so has part: feature:6911734-6912014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6906664-6907255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6907698-6907764:1:exon

position:6907698:1
position: 6907698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6907963-6911511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6911734-6912014:1:exon

LOC105057998
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057998
product: zinc finger BED domain-containing protein RICESLEEPER 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029268355.1
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: join(6906664..6907255,6907698..6907764,6907963..6911084,6911217..6911511,6911734..6912014)
location: region:6906664-6912014:1
so has part: feature:6906664-6907255:1:exon
so has part: feature:6907698-6907764:1:exon
so has part: feature:6907963-6911084:1:exon
so has part: feature:6911217-6911511:1:exon
so has part: feature:6911734-6912014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6906664-6907255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6907698-6907764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6907963-6911084:1:exon

position:6911084:1
position: 6911084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6911217-6911511:1:exon

position:6911217:1
position: 6911217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6911734-6912014:1:exon

LOC105057998
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057998
product: zinc finger BED domain-containing protein RICESLEEPER 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029268354.1
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: join(6906664..6907255,6907698..6907764,6907963..6910924,6911019..6911511,6911734..6912014)
location: region:6906664-6912014:1
so has part: feature:6906664-6907255:1:exon
so has part: feature:6907698-6907764:1:exon
so has part: feature:6907963-6910924:1:exon
so has part: feature:6911019-6911511:1:exon
so has part: feature:6911734-6912014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6906664-6907255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6907698-6907764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6907963-6910924:1:exon

position:6910924:1
position: 6910924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6911019-6911511:1:exon

position:6911019:1
position: 6911019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6911734-6912014:1:exon

LOC105057998
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057998
product: zinc finger BED domain-containing protein RICESLEEPER 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029268356.1
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: join(6906664..6907255,6907698..6907764,6907963..6910924,6911019..6911084,6911217..6911511,6911734..6912014)
location: region:6906664-6912014:1
so has part: feature:6906664-6907255:1:exon
so has part: feature:6907698-6907764:1:exon
so has part: feature:6907963-6910924:1:exon
so has part: feature:6911019-6911084:1:exon
so has part: feature:6911217-6911511:1:exon
so has part: feature:6911734-6912014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6906664-6907255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6907698-6907764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6907963-6910924:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6911019-6911084:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6911217-6911511:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6911734-6912014:1:exon

LOC105057998
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057998
product: zinc finger BED domain-containing protein RICESLEEPER 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029268357.1
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: join(6906664..6907255,6907698..6907764,6907963..6910924,6911217..6911511,6911734..6912014)
location: region:6906664-6912014:1
so has part: feature:6906664-6907255:1:exon
so has part: feature:6907698-6907764:1:exon
so has part: feature:6907963-6910924:1:exon
so has part: feature:6911217-6911511:1:exon
so has part: feature:6911734-6912014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6906664-6907255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6907698-6907764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6907963-6910924:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6911217-6911511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6911734-6912014:1:exon

LOC105057998
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057998
product: zinc finger BED domain-containing protein RICESLEEPER 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029268352.1
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: join(6906664..6907255,6907698..6907764,6907963..6908024,6908141..6911511,6911734..6912014)
location: region:6906664-6912014:1
so has part: feature:6906664-6907255:1:exon
so has part: feature:6907698-6907764:1:exon
so has part: feature:6907963-6908024:1:exon
so has part: feature:6908141-6911511:1:exon
so has part: feature:6911734-6912014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6906664-6907255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6907698-6907764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6907963-6908024:1:exon

position:6908024:1
position: 6908024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6908141-6911511:1:exon

position:6908141:1
position: 6908141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6911734-6912014:1:exon

LOC105057998
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105057998
product: zinc finger BED domain-containing protein RICESLEEPER 2, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003802611.1
SIO_010081: LOC105057998
so part of: LOC105057998
location: join(6906664..6907255,6907698..6907764,6910339..6911511,6911734..6912014)
location: region:6906664-6912014:1
so has part: feature:6906664-6907255:1:exon
so has part: feature:6907698-6907764:1:exon
so has part: feature:6910339-6911511:1:exon
so has part: feature:6911734-6912014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6906664-6907255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6907698-6907764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6910339-6911511:1:exon

position:6910339:1
position: 6910339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6911734-6912014:1:exon

LOC105057998
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057998
product: zinc finger BED domain-containing protein RICESLEEPER 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_019855244.2
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: join(6906664..6907255,6907698..6907764,6907963..6911283,6911420..6911511,6911734..6912009)
location: region:6906664-6912009:1
so has part: feature:6906664-6907255:1:exon
so has part: feature:6907698-6907764:1:exon
so has part: feature:6907963-6911283:1:exon
so has part: feature:6911420-6911511:1:exon
so has part: feature:6911734-6912009:1:exon

position:6912009:1
position: 6912009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6906664-6907255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6907698-6907764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6907963-6911283:1:exon

position:6911283:1
position: 6911283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6911420-6911511:1:exon

position:6911420:1
position: 6911420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6911734-6912009:1:exon

LOC105057998
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057998
product: zinc finger BED domain-containing protein RICESLEEPER 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019855248.2
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: join(6906664..6907255,6907698..6907764,6907963..6911084,6911217..6911283,6911420..6911511,6911734..6912009)
location: region:6906664-6912009:1
so has part: feature:6906664-6907255:1:exon
so has part: feature:6907698-6907764:1:exon
so has part: feature:6907963-6911084:1:exon
so has part: feature:6911217-6911283:1:exon
so has part: feature:6911420-6911511:1:exon
so has part: feature:6911734-6912009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6906664-6907255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6907698-6907764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6907963-6911084:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6911217-6911283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6911420-6911511:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6911734-6912009:1:exon

LOC105057998
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057998
product: zinc finger BED domain-containing protein RICESLEEPER 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_019855250.2
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: join(6906664..6907255,6907698..6907764,6907963..6910924,6911217..6911283,6911420..6911511,6911734..6912009)
location: region:6906664-6912009:1
so has part: feature:6906664-6907255:1:exon
so has part: feature:6907698-6907764:1:exon
so has part: feature:6907963-6910924:1:exon
so has part: feature:6911217-6911283:1:exon
so has part: feature:6911420-6911511:1:exon
so has part: feature:6911734-6912009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6906664-6907255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6907698-6907764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6907963-6910924:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6911217-6911283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6911420-6911511:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6911734-6912009:1:exon

LOC105057998
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105057998
product: zinc finger BED domain-containing protein RICESLEEPER 2, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_003802612.1
SIO_010081: LOC105057998
so part of: LOC105057998
location: join(6906664..6907255,6907698..6907764,6910897..6911511,6911734..6912009)
location: region:6906664-6912009:1
so has part: feature:6906664-6907255:1:exon
so has part: feature:6907698-6907764:1:exon
so has part: feature:6910897-6911511:1:exon
so has part: feature:6911734-6912009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6906664-6907255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6907698-6907764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6910897-6911511:1:exon

position:6910897:1
position: 6910897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6911734-6912009:1:exon

LOC105057998
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 2
translation: MLATAVEFKEVFPRFKDREPHYDCCPSLEDWEKVEKVCSILEVFWTATHIISGSEYPTSNLFLNEVYKVKVLLDKNIQDENDFIRALVRKLKQKFDKYWGERNLLMAIAAILDPRCKIRVIEFCFPKIYAPYDAQANIAKVREALYDLYGEYVTMHYSSEGEKSMDNQVAGSSSGPDGYVEASSSGWSEFSDYLRMVEIVLPHKSNIGIYLEEGCYICDSNSDKFVALEWWKVNTLKYRMLSKTACDILAISISIVASKDTFSAGTRVIDAYRASLSPDTVQVLMYAGDWCRNIHGVKKNNKISFK
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: 6909174..6910094
location: region:6909174-6910094:1
so has part: feature:6909174-6910094:1:exon

XP_019710803.1
type: Protein
SIO_000068: ncbiprotein

position:6909174:1
position: 6909174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6910094:1
position: 6910094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6909174-6910094:1:exon

LOC105057998
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 2
translation: MLATAVEFKEVFPRFKDREPHYDCCPSLEDWEKVEKVCSILEVFWTATHIISGSEYPTSNLFLNEVYKVKVLLDKNIQDENDFIRALVRKLKQKFDKYWGERNLLMAIAAILDPRCKIRVIEFCFPKIYAPYDAQANIAKVREALYDLYGEYVTMHYSSEGEKSMDNQVAGSSSGPDGYVEASSSGWSEFSDYLRMVEIVLPHKSNIGIYLEEGCYICDSNSDKFVALEWWKVNTLKYRMLSKTACDILAISISIVASKDTFSAGTRVIDAYRASLSPDTVQVLMYAGDWCRNIHGVKKNNKISFK
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: 6909174..6910094
location: region:6909174-6910094:1
so has part: feature:6909174-6910094:1:exon

XP_019710807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6909174-6910094:1:exon

LOC105057998
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 2
translation: MLATAVEFKEVFPRFKDREPHYDCCPSLEDWEKVEKVCSILEVFWTATHIISGSEYPTSNLFLNEVYKVKVLLDKNIQDENDFIRALVRKLKQKFDKYWGERNLLMAIAAILDPRCKIRVIEFCFPKIYAPYDAQANIAKVREALYDLYGEYVTMHYSSEGEKSMDNQVAGSSSGPDGYVEASSSGWSEFSDYLRMVEIVLPHKSNIGIYLEEGCYICDSNSDKFVALEWWKVNTLKYRMLSKTACDILAISISIVASKDTFSAGTRVIDAYRASLSPDTVQVLMYAGDWCRNIHGVKKNNKISFK
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: 6909174..6910094
location: region:6909174-6910094:1
so has part: feature:6909174-6910094:1:exon

XP_019710809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6909174-6910094:1:exon

LOC105057998
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 2
translation: MLATAVEFKEVFPRFKDREPHYDCCPSLEDWEKVEKVCSILEVFWTATHIISGSEYPTSNLFLNEVYKVKVLLDKNIQDENDFIRALVRKLKQKFDKYWGERNLLMAIAAILDPRCKIRVIEFCFPKIYAPYDAQANIAKVREALYDLYGEYVTMHYSSEGEKSMDNQVAGSSSGPDGYVEASSSGWSEFSDYLRMVEIVLPHKSNIGIYLEEGCYICDSNSDKFVALEWWKVNTLKYRMLSKTACDILAISISIVASKDTFSAGTRVIDAYRASLSPDTVQVLMYAGDWCRNIHGVKKNNKISFK
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: 6909174..6910094
location: region:6909174-6910094:1
so has part: feature:6909174-6910094:1:exon

XP_029124184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6909174-6910094:1:exon

LOC105057998
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 2
translation: MLATAVEFKEVFPRFKDREPHYDCCPSLEDWEKVEKVCSILEVFWTATHIISGSEYPTSNLFLNEVYKVKVLLDKNIQDENDFIRALVRKLKQKFDKYWGERNLLMAIAAILDPRCKIRVIEFCFPKIYAPYDAQANIAKVREALYDLYGEYVTMHYSSEGEKSMDNQVAGSSSGPDGYVEASSSGWSEFSDYLRMVEIVLPHKSNIGIYLEEGCYICDSNSDKFVALEWWKVNTLKYRMLSKTACDILAISISIVASKDTFSAGTRVIDAYRASLSPDTVQVLMYAGDWCRNIHGVKKNNKISFK
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: 6909174..6910094
location: region:6909174-6910094:1
so has part: feature:6909174-6910094:1:exon

XP_029124185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6909174-6910094:1:exon

LOC105057998
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 2
translation: MLATAVEFKEVFPRFKDREPHYDCCPSLEDWEKVEKVCSILEVFWTATHIISGSEYPTSNLFLNEVYKVKVLLDKNIQDENDFIRALVRKLKQKFDKYWGERNLLMAIAAILDPRCKIRVIEFCFPKIYAPYDAQANIAKVREALYDLYGEYVTMHYSSEGEKSMDNQVAGSSSGPDGYVEASSSGWSEFSDYLRMVEIVLPHKSNIGIYLEEGCYICDSNSDKFVALEWWKVNTLKYRMLSKTACDILAISISIVASKDTFSAGTRVIDAYRASLSPDTVQVLMYAGDWCRNIHGVKKNNKISFK
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: 6909174..6910094
location: region:6909174-6910094:1
so has part: feature:6909174-6910094:1:exon

XP_029124186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6909174-6910094:1:exon

LOC105057998
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 2
translation: MLATAVEFKEVFPRFKDREPHYDCCPSLEDWEKVEKVCSILEVFWTATHIISGSEYPTSNLFLNEVYKVKVLLDKNIQDENDFIRALVRKLKQKFDKYWGERNLLMAIAAILDPRCKIRVIEFCFPKIYAPYDAQANIAKVREALYDLYGEYVTMHYSSEGEKSMDNQVAGSSSGPDGYVEASSSGWSEFSDYLRMVEIVLPHKSNIGIYLEEGCYICDSNSDKFVALEWWKVNTLKYRMLSKTACDILAISISIVASKDTFSAGTRVIDAYRASLSPDTVQVLMYAGDWCRNIHGVKKNNKISFK
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: 6909174..6910094
location: region:6909174-6910094:1
so has part: feature:6909174-6910094:1:exon

XP_029124187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6909174-6910094:1:exon

LOC105057998
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 2
translation: MLATAVEFKEVFPRFKDREPHYDCCPSLEDWEKVEKVCSILEVFWTATHIISGSEYPTSNLFLNEVYKVKVLLDKNIQDENDFIRALVRKLKQKFDKYWGERNLLMAIAAILDPRCKIRVIEFCFPKIYAPYDAQANIAKVREALYDLYGEYVTMHYSSEGEKSMDNQVAGSSSGPDGYVEASSSGWSEFSDYLRMVEIVLPHKSNIGIYLEEGCYICDSNSDKFVALEWWKVNTLKYRMLSKTACDILAISISIVASKDTFSAGTRVIDAYRASLSPDTVQVLMYAGDWCRNIHGVKKNNKISFK
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: 6909174..6910094
location: region:6909174-6910094:1
so has part: feature:6909174-6910094:1:exon

XP_029124188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6909174-6910094:1:exon

LOC105057998
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 2
translation: MLATAVEFKEVFPRFKDREPHYDCCPSLEDWEKVEKVCSILEVFWTATHIISGSEYPTSNLFLNEVYKVKVLLDKNIQDENDFIRALVRKLKQKFDKYWGERNLLMAIAAILDPRCKIRVIEFCFPKIYAPYDAQANIAKVREALYDLYGEYVTMHYSSEGEKSMDNQVAGSSSGPDGYVEASSSGWSEFSDYLRMVEIVLPHKSNIGIYLEEGCYICDSNSDKFVALEWWKVNTLKYRMLSKTACDILAISISIVASKDTFSAGTRVIDAYRASLSPDTVQVLMYAGDWCRNIHGVKKNNKISFK
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: 6909174..6910094
location: region:6909174-6910094:1
so has part: feature:6909174-6910094:1:exon

XP_029124189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6909174-6910094:1:exon

LOC105057998
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 2
translation: MLATAVEFKEVFPRFKDREPHYDCCPSLEDWEKVEKVCSILEVFWTATHIISGSEYPTSNLFLNEVYKVKVLLDKNIQDENDFIRALVRKLKQKFDKYWGERNLLMAIAAILDPRCKIRVIEFCFPKIYAPYDAQANIAKVREALYDLYGEYVTMHYSSEGEKSMDNQVAGSSSGPDGYVEASSSGWSEFSDYLRMVEIVLPHKSNIGIYLEEGCYICDSNSDKFVALEWWKVNTLKYRMLSKTACDILAISISIVASKDTFSAGTRVIDAYRASLSPDTVQVLMYAGDWCRNIHGVKKNNKISFK
SIO_010081: LOC105057998
subclass of: SO_0000673
so part of: LOC105057998
location: 6909174..6910094
location: region:6909174-6910094:1
so has part: feature:6909174-6910094:1:exon

XP_029124190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6909174-6910094:1:exon

LOC105057999
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105057999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6950950..6951761
location: region:6950950-6951761:1
so has part: feature:6950950-6951761:1:exon
subclass of: SO_0000010

105057999
type: Gene
SIO_000068: ncbigene

position:6950950:1
position: 6950950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6951761:1
position: 6951761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6950950-6951761:1:exon

LOC105057999
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105057999
product: MFP1 attachment factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940753.3
SIO_010081: LOC105057999
subclass of: SO_0000673
so part of: LOC105057999
location: 6950950..6951761
location: region:6950950-6951761:1
so has part: feature:6950950-6951761:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6950950-6951761:1:exon

LOC105057999
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105057999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MFP1 attachment factor 1
translation: MAEGGEETKPQGGEEAPRSAEEYAGEGKAGLVGTFPSAALNIWPPSQRTREAVIQRLVQTLSTESIISKRYGMLSLSDASDAARRIEEEAFASASSGGSATSVDDGIETLQIYSKEISQRMLETVKAKASSESMSSPATSPPPSDGGATVENAAPTAAGEESSASSPA
SIO_010081: LOC105057999
subclass of: SO_0000673
so part of: LOC105057999
location: 6951016..6951522
location: region:6951016-6951522:1
so has part: feature:6951016-6951522:1:exon

XP_010939055.1
type: Protein
SIO_000068: ncbiprotein

position:6951016:1
position: 6951016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6951522:1
position: 6951522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6951016-6951522:1:exon

LOC105058002
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105058002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7064388..7073591
location: region:7064388-7073591:1
so has part: feature:7064388-7073591:1:exon
subclass of: SO_0000010

105058002
type: Gene
SIO_000068: ncbigene

position:7064388:1
position: 7064388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7073591:1
position: 7073591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7064388-7073591:1:exon

LOC105058002
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105058002
product: transmembrane protein 230, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003802615.1
SIO_010081: LOC105058002
so part of: LOC105058002
location: join(7064388..7064763,7068144..7068438,7071817..7071942,7073095..7073591)
location: region:7064388-7073591:1
so has part: feature:7064388-7064763:1:exon
so has part: feature:7068144-7068438:1:exon
so has part: feature:7071817-7071942:1:exon
so has part: feature:7073095-7073591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7064388-7064763:1:exon

position:7064763:1
position: 7064763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7068144-7068438:1:exon

position:7068144:1
position: 7068144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7068438:1
position: 7068438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7071817-7071942:1:exon

position:7071817:1
position: 7071817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7071942:1
position: 7071942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7073095-7073591:1:exon

position:7073095:1
position: 7073095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105058002
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105058002
product: transmembrane protein 230, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003802614.1
SIO_010081: LOC105058002
so part of: LOC105058002
location: join(7064388..7064763,7068144..7068438,7071817..7072383)
location: region:7064388-7072383:1
so has part: feature:7064388-7064763:1:exon
so has part: feature:7068144-7068438:1:exon
so has part: feature:7071817-7072383:1:exon

position:7072383:1
position: 7072383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7064388-7064763:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7068144-7068438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7071817-7072383:1:exon

LOC105058002
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105058002
product: transmembrane protein 230, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_003802617.1
SIO_010081: LOC105058002
so part of: LOC105058002
location: join(7064388..7064532,7068144..7068495,7071817..7071942,7072042..7072383)
location: region:7064388-7072383:1
so has part: feature:7064388-7064532:1:exon
so has part: feature:7068144-7068495:1:exon
so has part: feature:7071817-7071942:1:exon
so has part: feature:7072042-7072383:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7064388-7064532:1:exon

position:7064532:1
position: 7064532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7068144-7068495:1:exon

position:7068495:1
position: 7068495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7071817-7071942:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7072042-7072383:1:exon

position:7072042:1
position: 7072042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105058002
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105058002
product: transmembrane protein 230, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_003802613.1
SIO_010081: LOC105058002
so part of: LOC105058002
location: join(7064773..7068495,7071817..7071942,7072042..7072383)
location: region:7064773-7072383:1
so has part: feature:7064773-7068495:1:exon
so has part: feature:7071817-7071942:1:exon
so has part: feature:7072042-7072383:1:exon

position:7064773:1
position: 7064773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7064773-7068495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7071817-7071942:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7072042-7072383:1:exon

LOC105058002
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105058002
product: transmembrane protein 230, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003802616.1
SIO_010081: LOC105058002
so part of: LOC105058002
location: join(7064773..7066612,7066931..7068495,7071817..7071942,7072042..7072383)
location: region:7064773-7072383:1
so has part: feature:7064773-7066612:1:exon
so has part: feature:7066931-7068495:1:exon
so has part: feature:7071817-7071942:1:exon
so has part: feature:7072042-7072383:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7064773-7066612:1:exon

position:7066612:1
position: 7066612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7066931-7068495:1:exon

position:7066931:1
position: 7066931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7071817-7071942:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7072042-7072383:1:exon

LOC105058002
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105058002
product: transmembrane protein 230, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_029268358.1
SIO_010081: LOC105058002
subclass of: SO_0000673
so part of: LOC105058002
location: join(7068199..7068495,7071817..7072383)
location: region:7068199-7072383:1
so has part: feature:7068199-7068495:1:exon
so has part: feature:7071817-7072383:1:exon

position:7068199:1
position: 7068199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7068199-7068495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7071817-7072383:1:exon

LOC105058002
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105058002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 230
translation: MTSRRHVRYQPLAADERDSDSSGEEKDVDLRYLYIPKSCKKIPWKSIALALFLLALGSALLFLSFFVFTGHMAGDQSQAYAFLLLGILAFLPGFYETRVAYYSWRGAQGYTFASIPDY
SIO_010081: LOC105058002
subclass of: SO_0000673
so part of: LOC105058002
location: join(7068219..7068495,7071817..7071896)
location: region:7068219-7071896:1
so has part: feature:7068219-7068495:1:exon
so has part: feature:7071817-7071896:1:exon

XP_029124191.1
type: Protein
SIO_000068: ncbiprotein

position:7068219:1
position: 7068219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7071896:1
position: 7071896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7068219-7068495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7071817-7071896:1:exon

LOC105058003
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105058003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7077183..7087568
location: region:7077183-7087568:1
so has part: feature:7077183-7087568:1:exon
subclass of: SO_0000010

105058003
type: Gene
SIO_000068: ncbigene

position:7077183:1
position: 7077183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7087568:1
position: 7087568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7077183-7087568:1:exon

LOC105058003
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105058003
product: uncharacterized LOC105058003
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_010940755.3
SIO_010081: LOC105058003
subclass of: SO_0000673
so part of: LOC105058003
location: join(7077183..7079324,7087100..7087568)
location: region:7077183-7087568:1
so has part: feature:7077183-7079324:1:exon
so has part: feature:7087100-7087568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7077183-7079324:1:exon

position:7079324:1
position: 7079324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7087100-7087568:1:exon

position:7087100:1
position: 7087100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105058003
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105058003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105058003
translation: MGRSVGKRNSPRSPPQIVRPRPEVLEVGIVPPMNALEILRETVRILRADPSTFMTILALLIFPVSTALLSNTLIDATAVGAVSRRLVFLAVTSGLPLTHFLKQMCHHLAGTVVSSAFCFPLLLTFLLLARASIVYSVACFYAGKKVVALEFFGTMRRIWRRLVFTYLWVCVSISGCLALFLALLVVVCNAFSGLGYPPEIVVYPALFTVLVFSMVYAHTIIVCNLASVISVLEDVLGPQALVRSVRLIKGQTQAGLLIFLGSTIGMAFVEGLFEHRVKTLSYGDGSSRLWEGPLLVLMYSFVVLADYMMSAVFYFTCRSSSMQVLNGDDHSLEELGNISIELVDAK
SIO_010081: LOC105058003
subclass of: SO_0000673
so part of: LOC105058003
location: 7077596..7078636
location: region:7077596-7078636:1
so has part: feature:7077596-7078636:1:exon

XP_010939057.1
type: Protein
SIO_000068: ncbiprotein

position:7077596:1
position: 7077596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7078636:1
position: 7078636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7077596-7078636:1:exon

LOC105058004
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105058004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7091069..7092783
location: region:7091069-7092783:1
so has part: feature:7091069-7092783:1:exon
subclass of: SO_0000010

105058004
type: Gene
SIO_000068: ncbigene

position:7091069:1
position: 7091069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7092783:1
position: 7092783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7091069-7092783:1:exon

LOC105058004
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105058004
product: uncharacterized LOC105058004
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010940756.3
SIO_010081: LOC105058004
subclass of: SO_0000673
so part of: LOC105058004
location: 7091069..7092783
location: region:7091069-7092783:1
so has part: feature:7091069-7092783:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7091069-7092783:1:exon

LOC105058004
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105058004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105058004
translation: MGKVIEITRRSIHAFFQSYHSFATTAALLVFPVSAATLLSQSLTLSSSPILRTVSSRLRLLFEAAGFPATSQFFSLLSFKISQTILTSISTLPFTHIFLILAKASVIQIIHEFPRCRLALPPFSSLLHLYPSLLLTKLTNSLAILSANATIFSILLLVFNVADILHLSSSNSMLVLSAASAIFYSIVIANTMVACNLAIVISAMENSGGYLSILKALVLIRGRTATAITLALPASLSMAAVEALFQCRVMRPYRLSGNSNPSVIWEAFLITYIYSLLIVLDTIITCMFLKSCKMGEGSHWYAYDCQTDSEPEAKGAQQA
SIO_010081: LOC105058004
subclass of: SO_0000673
so part of: LOC105058004
location: 7091584..7092543
location: region:7091584-7092543:1
so has part: feature:7091584-7092543:1:exon

XP_010939058.1
type: Protein
SIO_000068: ncbiprotein

position:7091584:1
position: 7091584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7092543:1
position: 7092543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7091584-7092543:1:exon

LOC105058011
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105058011
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7093000..7101814)
location: region:7093000-7101814:-1
so has part: feature:7093000-7101814:-1:exon
subclass of: SO_0000010

105058011
type: Gene
SIO_000068: ncbigene

position:7093000:-1
position: 7093000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7101814:-1
position: 7101814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7093000-7101814:-1:exon

LOC105058011
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105058011
product: probable protein S-acyltransferase 22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029268587.1
SIO_010081: LOC105058011
subclass of: SO_0000673
so part of: LOC105058011
location: complement(join(7093000..7094146,7096427..7096463,7098967..7099260,7099343..7099442,7100602..7100855,7100949..7101814))
location: region:7093000-7101814:-1
so has part: feature:7100949-7101814:-1:exon
so has part: feature:7100602-7100855:-1:exon
so has part: feature:7099343-7099442:-1:exon
so has part: feature:7098967-7099260:-1:exon
so has part: feature:7096427-7096463:-1:exon
so has part: feature:7093000-7094146:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7100949-7101814:-1:exon

position:7100949:-1
position: 7100949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100602-7100855:-1:exon

position:7100602:-1
position: 7100602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7100855:-1
position: 7100855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7099343-7099442:-1:exon

position:7099343:-1
position: 7099343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7099442:-1
position: 7099442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7098967-7099260:-1:exon

position:7098967:-1
position: 7098967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7099260:-1
position: 7099260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7096427-7096463:-1:exon

position:7096427:-1
position: 7096427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7096463:-1
position: 7096463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7093000-7094146:-1:exon

position:7094146:-1
position: 7094146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105058011
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105058011
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(7093494..7093496),aa:OTHER)
product: LOW QUALITY PROTEIN: probable protein S-acyltransferase 22
translation: MRKHGWQLPYHLLLVVAVAVFLALGFAFYVFFVPLVGKKLFQYVVMGTYTPLVSLFTDQCDSFLLFVFFPDIFCVFEMGPICGGCMLGSYIFRLMELDIPMLLEKCRSTDNAADNVFCLYVSCAAADPADPEMKHMLQQLVTNHWMSISTKMPLMEKSVIDFRESLSCCYTFLAVFFSWCPLSFKLTQCHSHEQSSKQQISEESMFFCSLCEVEVCNLHQMMMIMMMMIYKILHPHGFCTSPEIGTSVNPTAKKMMVEESTKKKSAGTAKISPWTLAHVNADEVSKAAIEARKRSKVLQPIVRRELPLGHGIDYSFGSGSGRIVPRPDNKSWPNKRGRFLVDLPFEPLAKISARTTEGDDSDLAPETSSGLAPLQLEARSAFWPNKPVSSTRIVASSPDSSIDSSDLHPFHISSSRAEEVQGLTSIPVPGIVAQKGIQLLRSTSDEYEASGGEDSDQIPXRIVHRSSNWANLVLISGCDKMAADFKASSASLQSYTRPF
SIO_010081: LOC105058011
subclass of: SO_0000673
so part of: LOC105058011
location: complement(join(7093374..7094146,7096427..7096463,7098967..7099260,7099343..7099442,7100602..7100855,7100949..7100990))
location: region:7093374-7100990:-1
so has part: feature:7100949-7100990:-1:exon
so has part: feature:7100602-7100855:-1:exon
so has part: feature:7099343-7099442:-1:exon
so has part: feature:7098967-7099260:-1:exon
so has part: feature:7096427-7096463:-1:exon
so has part: feature:7093374-7094146:-1:exon

XP_029124420.1
type: Protein
SIO_000068: ncbiprotein

position:7093374:-1
position: 7093374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7100990:-1
position: 7100990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7100949-7100990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100602-7100855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7099343-7099442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7098967-7099260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7096427-7096463:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7093374-7094146:-1:exon

LOC105058012
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105058012
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7109106..7138172)
location: region:7109106-7138172:-1
so has part: feature:7109106-7138172:-1:exon
subclass of: SO_0000010

105058012
type: Gene
SIO_000068: ncbigene

position:7109106:-1
position: 7109106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7138172:-1
position: 7138172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7109106-7138172:-1:exon

LOC105058012
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105058012
product: formin-like protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029268359.1
SIO_010081: LOC105058012
subclass of: SO_0000673
so part of: LOC105058012
location: complement(join(7109106..7109532,7109624..7109876,7109974..7110133,7113872..7113938,7114039..7114107,7114581..7114697,7114774..7114845,7115382..7115476,7118335..7118416,7118502..7118552,7118630..7118710,7121624..7121665,7121765..7121863,7122904..7122975,7132503..7132629,7132946..7133747,7133826..7136091,7136171..7136392,7136469..7137172,7137867..7138172))
location: region:7109106-7138172:-1
so has part: feature:7137867-7138172:-1:exon
so has part: feature:7136469-7137172:-1:exon
so has part: feature:7136171-7136392:-1:exon
so has part: feature:7133826-7136091:-1:exon
so has part: feature:7132946-7133747:-1:exon
so has part: feature:7132503-7132629:-1:exon
so has part: feature:7122904-7122975:-1:exon
so has part: feature:7121765-7121863:-1:exon
so has part: feature:7121624-7121665:-1:exon
so has part: feature:7118630-7118710:-1:exon
so has part: feature:7118502-7118552:-1:exon
so has part: feature:7118335-7118416:-1:exon
so has part: feature:7115382-7115476:-1:exon
so has part: feature:7114774-7114845:-1:exon
so has part: feature:7114581-7114697:-1:exon
so has part: feature:7114039-7114107:-1:exon
so has part: feature:7113872-7113938:-1:exon
so has part: feature:7109974-7110133:-1:exon
so has part: feature:7109624-7109876:-1:exon
so has part: feature:7109106-7109532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7137867-7138172:-1:exon

position:7137867:-1
position: 7137867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7136469-7137172:-1:exon

position:7136469:-1
position: 7136469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7137172:-1
position: 7137172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7136171-7136392:-1:exon

position:7136171:-1
position: 7136171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7136392:-1
position: 7136392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7133826-7136091:-1:exon

position:7133826:-1
position: 7133826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7136091:-1
position: 7136091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7132946-7133747:-1:exon

position:7132946:-1
position: 7132946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7133747:-1
position: 7133747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7132503-7132629:-1:exon

position:7132503:-1
position: 7132503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7132629:-1
position: 7132629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7122904-7122975:-1:exon

position:7122904:-1
position: 7122904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7122975:-1
position: 7122975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7121765-7121863:-1:exon

position:7121765:-1
position: 7121765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7121863:-1
position: 7121863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7121624-7121665:-1:exon

position:7121624:-1
position: 7121624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7121665:-1
position: 7121665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7118630-7118710:-1:exon

position:7118630:-1
position: 7118630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7118710:-1
position: 7118710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7118502-7118552:-1:exon

position:7118502:-1
position: 7118502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7118552:-1
position: 7118552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7118335-7118416:-1:exon

position:7118335:-1
position: 7118335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7118416:-1
position: 7118416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7115382-7115476:-1:exon

position:7115382:-1
position: 7115382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7115476:-1
position: 7115476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7114774-7114845:-1:exon

position:7114774:-1
position: 7114774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7114845:-1
position: 7114845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7114581-7114697:-1:exon

position:7114581:-1
position: 7114581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7114697:-1
position: 7114697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7114039-7114107:-1:exon

position:7114039:-1
position: 7114039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7114107:-1
position: 7114107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7113872-7113938:-1:exon

position:7113872:-1
position: 7113872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7113938:-1
position: 7113938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7109974-7110133:-1:exon

position:7109974:-1
position: 7109974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7110133:-1
position: 7110133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7109624-7109876:-1:exon

position:7109624:-1
position: 7109624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7109876:-1
position: 7109876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7109106-7109532:-1:exon

position:7109532:-1
position: 7109532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105058012
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105058012
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(7109873..7109875),aa:OTHER)
transl except: (pos:complement(7109864..7109866),aa:OTHER)
product: LOW QUALITY PROTEIN: formin-like protein 6
translation: MALFRRLFYRKPPDRLLEISERVYVFDCCFSTKILEEDKYRDYMGGIVAQVQDYFPDASFMVFNFREGDRRSQVSDILSDYNMTVMDYPQQYEGCPLLPLEMIHHFLRSSESWLSMEGQHNVLLMHCERGGWPVLAFMLAGLLLYRKHYTGEQKTLEMVYKQAPKELLHLLSPLNPQPSHMRYLQYISRRGSGSDWPPGDTPFTLECLILRVIPIFDREGGCRPIIHIYGQNPLTLANRNPKTLYATPMTKKYLRHYKQAEGVPIKINCHCRVQGDVVVECIHMDEELEHEEMMFRVMFNTAFVRSNILTLSRDEIDVAWNAKDKFPKDFKAEVLFSDYDAVESDSTTEVIADDDETECASTEATEEFFEAEEIFNNADWQDGKRELDSHTIRIKSSVDDGSHKTDIYYFSDEAKSRLETGNIEEDLKTIITEKLTTIDDKIVNLETPGVAGPAVSRLETGNAKYDEGDVTEKSFFLDNMTAVQEKSVLESSSILQDSKAIDFSVDEEKNTLKIGNSKQDIESIITFVRTTVDDSSWKLEAPTVVDEANGRSDKRDTKPCMDDIITRKQSALNDRSPSSVTQSMADKVRRNSETHNSKRDILSGAIQDEAKLCHEGRLGNLGMAEQIETRPDRSNASCGDKLLSRKPITLDYTIRFEEKNIVEASNFKHEVKDIITLAAEEKRHSGSFNFEEDADGIVTKKTITLDNMSCNSDDSTLADAANSRVEQREYRHNQDNLIVRKKSALTEKNHRLGTPDIENETKYILETHVCKRDRDKGVTEKSLPMKALNQKTGNELQKQSTEKSLPPMSKKSPTSIQPLNFGASRQKIKQQEHLDHTKLTKLKTIPRCTSPQDPDATTVHMPSDPGSRYNSAPGAVAISAHPKDNEAAETAQFPPISASIYRIATSLVPSVQSALPPVLYSIQEVPDSSYTASVSQPSSCHHPQSPTSQLQAAPLSTLPPLPPSLGTSSNSFSAHASFTPSSPPPPPLRTGAIPQASPCAPPPPPPPPPPSLSPSFGSSYTLRHLSSPSRIGVTCSSLPHPPPSTPPLPPLVHNAFASNIPPPPPPPPPFHSGASTKCPSPTPPSPPPPMLLGASTRGLPSPSLPPPPPPPPPFMRSSSCSPAPHPPPLQNQGGQFKGPPPPPPPPIQPNASGSVVPPPPPPPHLKVGASPPPPPPPPLPMLSSNRTKLARATASTPPPPPPMHRGSPSPPPSLGARGTPPPPPLPGGHGAPPLPSSSGGCGAPPPPPPSGGRGGAPTQPTLLGTCTPASLAVPRTSDSPSPPPADAPGSQCSDRGLSSNSLVGARGRGLARSAGSGFSSLAPRRSSLKPLHWVKVTRAVQGSLWAELQKYNDAPSASEFDVSELESLFSAVVPKSDGYSKSEGRRKSLGSKSDKIHLIELRRANNTEIMLTKVKMPLSDLMSAVLALDDSILDVDQVENLIKFCPTKEEMELLKEYSSDKEKLGKCEQFFLELMKVPRVESKLRVFSFKIQFGSQVSDLRKSLNTVDSACEQMRNSVKLKEIMKKILFLGNTLNQGTARGSAIGYRLDSLLKLTDTRATNNKMTLMHYLCKVLAARSPHLLDFHGDLTSLEAASKIQLKSLAEEMQAIVKGLEKVELELNASENDGPVSEAFRKTLMEFTSVAGAEVRSLTALYTAVGRNADALTLYFGEDPARCPFEQVIFTLVNFVSMFRRAHQENCKQAELEKKKAPKEAEVEKSKASNRRSESVRSPNFXQDXANSCSRQRRRRKLQVGEERMLVDL
SIO_010081: LOC105058012
subclass of: SO_0000673
so part of: LOC105058012
location: complement(join(7109789..7109876,7109974..7110133,7113872..7113938,7114039..7114107,7114581..7114697,7114774..7114845,7115382..7115476,7118335..7118416,7118502..7118552,7118630..7118710,7121624..7121665,7121765..7121863,7122904..7122975,7132503..7132629,7132946..7133747,7133826..7136091,7136171..7136392,7136469..7137172,7137867..7137939))
location: region:7109789-7137939:-1
so has part: feature:7137867-7137939:-1:exon
so has part: feature:7136469-7137172:-1:exon
so has part: feature:7136171-7136392:-1:exon
so has part: feature:7133826-7136091:-1:exon
so has part: feature:7132946-7133747:-1:exon
so has part: feature:7132503-7132629:-1:exon
so has part: feature:7122904-7122975:-1:exon
so has part: feature:7121765-7121863:-1:exon
so has part: feature:7121624-7121665:-1:exon
so has part: feature:7118630-7118710:-1:exon
so has part: feature:7118502-7118552:-1:exon
so has part: feature:7118335-7118416:-1:exon
so has part: feature:7115382-7115476:-1:exon
so has part: feature:7114774-7114845:-1:exon
so has part: feature:7114581-7114697:-1:exon
so has part: feature:7114039-7114107:-1:exon
so has part: feature:7113872-7113938:-1:exon
so has part: feature:7109974-7110133:-1:exon
so has part: feature:7109789-7109876:-1:exon

XP_029124192.1
type: Protein
SIO_000068: ncbiprotein

position:7109789:-1
position: 7109789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7137939:-1
position: 7137939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7137867-7137939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7136469-7137172:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7136171-7136392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7133826-7136091:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7132946-7133747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7132503-7132629:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7122904-7122975:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7121765-7121863:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7121624-7121665:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7118630-7118710:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7118502-7118552:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7118335-7118416:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7115382-7115476:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7114774-7114845:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7114581-7114697:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7114039-7114107:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7113872-7113938:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7109974-7110133:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7109789-7109876:-1:exon

LOC105058013
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105058013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7252568..7253131
location: region:7252568-7253131:1
so has part: feature:7252568-7253131:1:exon
subclass of: SO_0000010

105058013
type: Gene
SIO_000068: ncbigene

position:7252568:1
position: 7252568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7253131:1
position: 7253131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7252568-7253131:1:exon

LOC105058013
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105058013
product: uncharacterized LOC105058013
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_010940767.1
SIO_010081: LOC105058013
subclass of: SO_0000673
so part of: LOC105058013
location: 7252568..7253131
location: region:7252568-7253131:1
so has part: feature:7252568-7253131:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7252568-7253131:1:exon

LOC105058013
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105058013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105058013
translation: MLDQQLDNKIENAVNNNNSSTPPYEGFNSKPPFIPRIVQESLFLYFKLLEPKVYDETVDPIIHLETFKAAILLQGASDAIFCRVFPPTLKGAAWQWYSSLKSASIHSFEDIYRSFVCHFINSRRQQKQFDYLYNIKQKEDESIRTFMNRFNMTILKVCNLEQSTTMAVMMYGLLKKDLKKSLIKTYP
SIO_010081: LOC105058013
subclass of: SO_0000673
so part of: LOC105058013
location: 7252568..7253131
location: region:7252568-7253131:1
so has part: feature:7252568-7253131:1:exon

XP_010939069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7252568-7253131:1:exon

LOC105058014
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105058014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7285063..7289272
location: region:7285063-7289272:1
so has part: feature:7285063-7289272:1:exon

105058014
type: Gene
SIO_000068: ncbigene

position:7285063:1
position: 7285063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7289272:1
position: 7289272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7285063-7289272:1:exon

LOC105058014
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105058014
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105058014
subclass of: SO_0000673
so part of: LOC105058014
location: 7285063..7285329
location: region:7285063-7285329:1
so has part: feature:7285063-7285329:1:exon

position:7285329:1
position: 7285329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7285063-7285329:1:exon

LOC105058014
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105058014
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105058014
subclass of: SO_0000673
so part of: LOC105058014
location: 7285819..7285902
location: region:7285819-7285902:1
so has part: feature:7285819-7285902:1:exon

position:7285819:1
position: 7285819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7285902:1
position: 7285902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7285819-7285902:1:exon

LOC105058014
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105058014
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105058014
subclass of: SO_0000673
so part of: LOC105058014
location: 7285991..7286457
location: region:7285991-7286457:1
so has part: feature:7285991-7286457:1:exon

position:7285991:1
position: 7285991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7286457:1
position: 7286457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7285991-7286457:1:exon

LOC105058014
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105058014
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105058014
subclass of: SO_0000673
so part of: LOC105058014
location: 7287386..7287521
location: region:7287386-7287521:1
so has part: feature:7287386-7287521:1:exon

position:7287386:1
position: 7287386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7287521:1
position: 7287521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7287386-7287521:1:exon

LOC105058014
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105058014
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105058014
subclass of: SO_0000673
so part of: LOC105058014
location: 7287625..7287787
location: region:7287625-7287787:1
so has part: feature:7287625-7287787:1:exon

position:7287625:1
position: 7287625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7287787:1
position: 7287787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7287625-7287787:1:exon

LOC105058014
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105058014
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105058014
subclass of: SO_0000673
so part of: LOC105058014
location: 7287898..7288015
location: region:7287898-7288015:1
so has part: feature:7287898-7288015:1:exon

position:7287898:1
position: 7287898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7288015:1
position: 7288015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7287898-7288015:1:exon

LOC105058014
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105058014
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105058014
subclass of: SO_0000673
so part of: LOC105058014
location: 7288155..7288350
location: region:7288155-7288350:1
so has part: feature:7288155-7288350:1:exon

position:7288155:1
position: 7288155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7288350:1
position: 7288350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7288155-7288350:1:exon

LOC105058014
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105058014
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105058014
subclass of: SO_0000673
so part of: LOC105058014
location: 7288815..7288937
location: region:7288815-7288937:1
so has part: feature:7288815-7288937:1:exon

position:7288815:1
position: 7288815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7288937:1
position: 7288937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7288815-7288937:1:exon

LOC105058014
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105058014
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105058014
subclass of: SO_0000673
so part of: LOC105058014
location: 7289181..7289272
location: region:7289181-7289272:1
so has part: feature:7289181-7289272:1:exon

position:7289181:1
position: 7289181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7289181-7289272:1:exon

LOC105058005
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105058005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7314752..7337808)
location: region:7314752-7337808:-1
so has part: feature:7314752-7337808:-1:exon
subclass of: SO_0000010

105058005
type: Gene
SIO_000068: ncbigene

position:7314752:-1
position: 7314752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7337808:-1
position: 7337808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7314752-7337808:-1:exon

LOC105058005
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105058005
product: protein IMPAIRED IN BABA-INDUCED STERILITY 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_019855197.2
SIO_010081: LOC105058005
subclass of: SO_0000673
so part of: LOC105058005
location: complement(join(7314752..7315551,7316402..7316534,7316621..7317151,7317260..7317371,7317862..7317959,7319699..7319926,7335777..7336094,7336247..7336531,7337057..7337808))
location: region:7314752-7337808:-1
so has part: feature:7337057-7337808:-1:exon
so has part: feature:7336247-7336531:-1:exon
so has part: feature:7335777-7336094:-1:exon
so has part: feature:7319699-7319926:-1:exon
so has part: feature:7317862-7317959:-1:exon
so has part: feature:7317260-7317371:-1:exon
so has part: feature:7316621-7317151:-1:exon
so has part: feature:7316402-7316534:-1:exon
so has part: feature:7314752-7315551:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7337057-7337808:-1:exon

position:7337057:-1
position: 7337057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7336247-7336531:-1:exon

position:7336247:-1
position: 7336247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7336531:-1
position: 7336531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7335777-7336094:-1:exon

position:7335777:-1
position: 7335777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7336094:-1
position: 7336094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7319699-7319926:-1:exon

position:7319699:-1
position: 7319699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7319926:-1
position: 7319926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7317862-7317959:-1:exon

position:7317862:-1
position: 7317862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7317959:-1
position: 7317959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7317260-7317371:-1:exon

position:7317260:-1
position: 7317260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7317371:-1
position: 7317371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7316621-7317151:-1:exon

position:7316621:-1
position: 7316621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7317151:-1
position: 7317151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7316402-7316534:-1:exon

position:7316402:-1
position: 7316402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7316534:-1
position: 7316534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7314752-7315551:-1:exon

position:7315551:-1
position: 7315551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105058005
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105058005
product: protein IMPAIRED IN BABA-INDUCED STERILITY 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_010940757.3
SIO_010081: LOC105058005
subclass of: SO_0000673
so part of: LOC105058005
location: complement(join(7314752..7315551,7316402..7316534,7316621..7317160,7317260..7317371,7317862..7317959,7319699..7319926,7335777..7336094,7336247..7336531,7337057..7337801))
location: region:7314752-7337801:-1
so has part: feature:7337057-7337801:-1:exon
so has part: feature:7336247-7336531:-1:exon
so has part: feature:7335777-7336094:-1:exon
so has part: feature:7319699-7319926:-1:exon
so has part: feature:7317862-7317959:-1:exon
so has part: feature:7317260-7317371:-1:exon
so has part: feature:7316621-7317160:-1:exon
so has part: feature:7316402-7316534:-1:exon
so has part: feature:7314752-7315551:-1:exon

position:7337801:-1
position: 7337801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7337057-7337801:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7336247-7336531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7335777-7336094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7319699-7319926:-1:exon