Elaeis guineensis chromosome 11, EG5, whole genome shotgun sequence.
type: Entry
definition: Elaeis guineensis chromosome 11, EG5, whole genome shotgun sequence.
sequence version: NC_026003.1
sequence date: 2019-05-22
sequence: sequence
division: CON
label: NC_026003.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA268357
dblink: SAMN02981535
keyword: WGS
keyword: RefSeq
source: Elaeis guineensis (African oil palm)
organism: Elaeis guineensis
taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis.
reference: 1
references: 23883927
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM002091.1.\nAssembly name: EG5\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by Orion Genomics on 2013/08/13\n(http://www.ncbi.nlm.nih.gov/assembly/GCA_000442705). The original\nwhole-genome shotgun project has the accession ASJS00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Orion Genomics\nAssembly Method :: Newbler v. 2.6\nAssembly Name :: EG5\nLong Assembly Name :: MPOB_ElaeisGuineensis5\nGenome Coverage :: 16.0x\nSequencing Technology :: 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Elaeis guineensis Annotation Release\n 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 30068910
topology: linear
so has quality: SO_0000987
location: 1..30068910
location: region:1-30068910:1
RO_0002162: 51953

NC_026003
type: RefSeq
SIO_000068: refseq

PRJNA268357
type: BioProject
SIO_000068: bioproject

SAMN02981535
type: BioSample
SIO_000068: biosample

1
title: Oil palm genome sequence reveals divergence of interfertile species in Old and New worlds
author: Singh, R.
author: Ong-Abdullah, M.
author: Low, E.T.
author: Manaf, M.A.
author: Rosli, R.
author: Nookiah, R.
author: Ooi, L.C.
author: Ooi, S.E.
author: Chan, K.L.
author: Halim, M.A.
author: Azizi, N.
author: Nagappan, J.
author: Bacher, B.
author: Lakey, N.
author: Smith, S.W.
author: He, D.
author: Hogan, M.
author: Budiman, M.A.
author: Lee, E.K.
author: Desalle, R.
author: Kudrna, D.
author: Goicoechea, J.L.
author: Wing, R.A.
author: Wilson, R.K.
author: Fulton, R.S.
author: Ordway, J.M.
author: Martienssen, R.A.
author: Sambanthamurthi, R.
journal: Nature (2013) In press
pubmed: 23883927
comments: Publication Status: Available-Online prior to print

23883927
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30068910:1
position: 30068910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-30068910:1:source
so part of: sequence
organism: Elaeis guineensis
mol type: genomic DNA
chromosome: 11
authority: Elaeis guineensis Jacq.

51953
type: Taxonomy
SIO_000068: taxonomy

LOC105053504
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053504
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(97865..159391)
location: region:97865-159391:-1
so has part: feature:97865-159391:-1:exon
subclass of: SO_0000010

105053504
type: Gene
SIO_000068: ncbigene

position:97865:-1
position: 97865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159391:-1
position: 159391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97865-159391:-1:exon

LOC105053504
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053504
product: DNA polymerase delta small subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_010934694.3
SIO_010081: LOC105053504
subclass of: SO_0000673
so part of: LOC105053504
location: complement(join(97865..98490,124448..124515,124595..124696,124956..125083,125156..125247,125358..125429,125588..125656,125825..125908,125977..126092,156335..156442,156540..156666,156768..156874,158855..158984,159112..159391))
location: region:97865-159391:-1
so has part: feature:159112-159391:-1:exon
so has part: feature:158855-158984:-1:exon
so has part: feature:156768-156874:-1:exon
so has part: feature:156540-156666:-1:exon
so has part: feature:156335-156442:-1:exon
so has part: feature:125977-126092:-1:exon
so has part: feature:125825-125908:-1:exon
so has part: feature:125588-125656:-1:exon
so has part: feature:125358-125429:-1:exon
so has part: feature:125156-125247:-1:exon
so has part: feature:124956-125083:-1:exon
so has part: feature:124595-124696:-1:exon
so has part: feature:124448-124515:-1:exon
so has part: feature:97865-98490:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159112-159391:-1:exon

position:159112:-1
position: 159112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158855-158984:-1:exon

position:158855:-1
position: 158855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158984:-1
position: 158984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:156768-156874:-1:exon

position:156768:-1
position: 156768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156874:-1
position: 156874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:156540-156666:-1:exon

position:156540:-1
position: 156540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156666:-1
position: 156666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:156335-156442:-1:exon

position:156335:-1
position: 156335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156442:-1
position: 156442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:125977-126092:-1:exon

position:125977:-1
position: 125977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126092:-1
position: 126092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:125825-125908:-1:exon

position:125825:-1
position: 125825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125908:-1
position: 125908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:125588-125656:-1:exon

position:125588:-1
position: 125588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125656:-1
position: 125656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:125358-125429:-1:exon

position:125358:-1
position: 125358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125429:-1
position: 125429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:125156-125247:-1:exon

position:125156:-1
position: 125156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125247:-1
position: 125247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:124956-125083:-1:exon

position:124956:-1
position: 124956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125083:-1
position: 125083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:124595-124696:-1:exon

position:124595:-1
position: 124595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124696:-1
position: 124696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:124448-124515:-1:exon

position:124448:-1
position: 124448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124515:-1
position: 124515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:97865-98490:-1:exon

position:98490:-1
position: 98490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053504
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053504
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase delta small subunit isoform X2
translation: MKDAEMGDGSPKLFERKQAVYQNLDERYVIHGERYRGQQYSQIYFTRLHHMRNLLNSLVPKWKPHLPVHTVLGLEEGKECIIIGTMYKHMKLKSSILDEYSKERSVVPLVKPHNFMHPDDHLILEDESGRVKLAGTFLAPSVYVTGIVVALHGKETSDGDFFVQDVLEAGLPPQIELPPGLREDKYVVFISGLSVGSNMFNPLQFQLLVDHITGHLGDENEQSIASQIVRVVIAGNSVRISQGILNGQILAPKDQSRLTEPIKEFDISLIQLAAAMPVDIMPGPSDPANFSLPQQPLHRCLFPGASVYNTFLSCTNPHQFELDDVLFLGTSGQNIDDLSKYSDAKDKLEFMERTLRWRHLAPTAPNTLGCFPYTDKDPFLIESCPHVYFIGNQDKHETHLLQGPEKQPVRLICIPRFCETGVAIVLNLRTLECHALSISANMDS
SIO_010081: LOC105053504
subclass of: SO_0000673
so part of: LOC105053504
location: complement(join(98431..98490,124448..124515,124595..124696,124956..125083,125156..125247,125358..125429,125588..125656,125825..125908,125977..126092,156335..156442,156540..156666,156768..156874,158855..158984,159112..159183))
location: region:98431-159183:-1
so has part: feature:159112-159183:-1:exon
so has part: feature:158855-158984:-1:exon
so has part: feature:156768-156874:-1:exon
so has part: feature:156540-156666:-1:exon
so has part: feature:156335-156442:-1:exon
so has part: feature:125977-126092:-1:exon
so has part: feature:125825-125908:-1:exon
so has part: feature:125588-125656:-1:exon
so has part: feature:125358-125429:-1:exon
so has part: feature:125156-125247:-1:exon
so has part: feature:124956-125083:-1:exon
so has part: feature:124595-124696:-1:exon
so has part: feature:124448-124515:-1:exon
so has part: feature:98431-98490:-1:exon

XP_010932996.1
type: Protein
SIO_000068: ncbiprotein

position:98431:-1
position: 98431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159183:-1
position: 159183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159112-159183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158855-158984:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156768-156874:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156540-156666:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156335-156442:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:125977-126092:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:125825-125908:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125588-125656:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125358-125429:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:125156-125247:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:124956-125083:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:124595-124696:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:124448-124515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:98431-98490:-1:exon

LOC105053504
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053504
product: DNA polymerase delta small subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029267149.1
SIO_010081: LOC105053504
subclass of: SO_0000673
so part of: LOC105053504
location: complement(join(101322..101554,124448..124515,124595..124696,124956..125083,125156..125247,125358..125429,125588..125656,125825..125908,125977..126092,156335..156442,156540..156666,156768..156874,158855..158984,159112..159391))
location: region:101322-159391:-1
so has part: feature:159112-159391:-1:exon
so has part: feature:158855-158984:-1:exon
so has part: feature:156768-156874:-1:exon
so has part: feature:156540-156666:-1:exon
so has part: feature:156335-156442:-1:exon
so has part: feature:125977-126092:-1:exon
so has part: feature:125825-125908:-1:exon
so has part: feature:125588-125656:-1:exon
so has part: feature:125358-125429:-1:exon
so has part: feature:125156-125247:-1:exon
so has part: feature:124956-125083:-1:exon
so has part: feature:124595-124696:-1:exon
so has part: feature:124448-124515:-1:exon
so has part: feature:101322-101554:-1:exon

position:101322:-1
position: 101322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159112-159391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158855-158984:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156768-156874:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156540-156666:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156335-156442:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:125977-126092:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:125825-125908:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125588-125656:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125358-125429:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:125156-125247:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:124956-125083:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:124595-124696:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:124448-124515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:101322-101554:-1:exon

position:101554:-1
position: 101554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053504
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053504
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase delta small subunit isoform X1
translation: MKDAEMGDGSPKLFERKQAVYQNLDERYVIHGERYRGQQYSQIYFTRLHHMRNLLNSLVPKWKPHLPVHTVLGLEEGKECIIIGTMYKHMKLKSSILDEYSKERSVVPLVKPHNFMHPDDHLILEDESGRVKLAGTFLAPSVYVTGIVVALHGKETSDGDFFVQDVLEAGLPPQIELPPGLREDKYVVFISGLSVGSNMFNPLQFQLLVDHITGHLGDENEQSIASQIVRVVIAGNSVRISQGILNGQILAPKDQSRLTEPIKEFDISLIQLAAAMPVDIMPGPSDPANFSLPQQPLHRCLFPGASVYNTFLSCTNPHQFELDDVLFLGTSGQNIDDLSKYSDAKDKLEFMERTLRWRHLAPTAPNTLGCFPYTDKDPFLIESCPHVYFIGNQDKHETHLLQGPEKQPVRLICIPRFCETGVAIVVLGLPLPIAVVAADGEAASISQSCSYGGFSLQRRLLVVLQVPVAIGCQVLASGAARSSSCC
SIO_010081: LOC105053504
subclass of: SO_0000673
so part of: LOC105053504
location: complement(join(101369..101554,124448..124515,124595..124696,124956..125083,125156..125247,125358..125429,125588..125656,125825..125908,125977..126092,156335..156442,156540..156666,156768..156874,158855..158984,159112..159183))
location: region:101369-159183:-1
so has part: feature:159112-159183:-1:exon
so has part: feature:158855-158984:-1:exon
so has part: feature:156768-156874:-1:exon
so has part: feature:156540-156666:-1:exon
so has part: feature:156335-156442:-1:exon
so has part: feature:125977-126092:-1:exon
so has part: feature:125825-125908:-1:exon
so has part: feature:125588-125656:-1:exon
so has part: feature:125358-125429:-1:exon
so has part: feature:125156-125247:-1:exon
so has part: feature:124956-125083:-1:exon
so has part: feature:124595-124696:-1:exon
so has part: feature:124448-124515:-1:exon
so has part: feature:101369-101554:-1:exon

XP_029122982.1
type: Protein
SIO_000068: ncbiprotein

position:101369:-1
position: 101369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159112-159183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158855-158984:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156768-156874:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156540-156666:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156335-156442:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:125977-126092:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:125825-125908:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125588-125656:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125358-125429:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:125156-125247:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:124956-125083:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:124595-124696:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:124448-124515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:101369-101554:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 51953
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 295277..295376
location: region:295277-295376:1
so has part: feature:295277-295376:1:region

position:295277:1
position: 295277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295376:1
position: 295376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295277-295376:1:region

LOC105053506
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053506
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(313339..>315196)
location: region:313339-315196:-1
so has part: feature:313339-315196:-1:exon
subclass of: SO_0000010

105053506
type: Gene
SIO_000068: ncbigene

position:313339:-1
position: 313339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315196:-1
position: 315196
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313339-315196:-1:exon

LOC105053506
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053506
product: bifunctional epoxide hydrolase 2
inference: similar to RNA sequence (same species):INSD:GAJH01073887.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 105 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_010934695.3
SIO_010081: LOC105053506
subclass of: SO_0000673
so part of: LOC105053506
location: complement(join(313339..313866,313948..314183,314309..314473,314705..314922,315024..>315196))
location: region:313339-315196:-1
so has part: feature:315024-315196:-1:exon
so has part: feature:314705-314922:-1:exon
so has part: feature:314309-314473:-1:exon
so has part: feature:313948-314183:-1:exon
so has part: feature:313339-313866:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315024-315196:-1:exon

position:315024:-1
position: 315024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:314705-314922:-1:exon

position:314705:-1
position: 314705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314922:-1
position: 314922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:314309-314473:-1:exon

position:314309:-1
position: 314309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314473:-1
position: 314473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:313948-314183:-1:exon

position:313948:-1
position: 313948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314183:-1
position: 314183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:313339-313866:-1:exon

position:313866:-1
position: 313866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053506
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053506
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bifunctional epoxide hydrolase 2
translation: MEQIEHSYLNVRGLRLHIAHIGKDELGTVVFLHGFPEIWYSWRHQMIAVAEAGFRAIAPDFRGYGLSDQPPEPESTTWEDLVADLLGILDSLSIPKAFMVGRDFGAIPAYEFAVYHPDRVSGVVTLGVPFTPTGFSFDTTVPKGFYITRWREPGRAEADFGRFDAKRVVRTIYILFSRSELPIAEENQEIMDLADSSTPLPSWFTEEDLAAYAVPYEKSGFRLPLHMPYRMLHLRIKKADPKVQVPALLVFGEKDYVLKFPGMEDYIRSGMAKHFVPDLEIIFMPEGSHFLQEQFPDKANELLVKFLKNHI
SIO_010081: LOC105053506
subclass of: SO_0000673
so part of: LOC105053506
location: complement(join(313620..313866,313948..314183,314309..314473,314705..314922,315024..315093))
location: region:313620-315093:-1
so has part: feature:315024-315093:-1:exon
so has part: feature:314705-314922:-1:exon
so has part: feature:314309-314473:-1:exon
so has part: feature:313948-314183:-1:exon
so has part: feature:313620-313866:-1:exon

XP_010932997.1
type: Protein
SIO_000068: ncbiprotein

position:313620:-1
position: 313620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315093:-1
position: 315093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315024-315093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314705-314922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314309-314473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313948-314183:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313620-313866:-1:exon

LOC105053509
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(553637..555459)
location: region:553637-555459:-1
so has part: feature:553637-555459:-1:exon
subclass of: SO_0000010

105053509
type: Gene
SIO_000068: ncbigene

position:553637:-1
position: 553637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555459:-1
position: 555459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553637-555459:-1:exon

LOC105053509
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053509
product: uncharacterized LOC105053509
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010934699.2
SIO_010081: LOC105053509
subclass of: SO_0000673
so part of: LOC105053509
location: complement(553637..555459)
location: region:553637-555459:-1
so has part: feature:553637-555459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:553637-555459:-1:exon

LOC105053509
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053509
translation: MPTPRRPFSFLLLLLRTSLVALSLLLFLLACNGLGLGLLCLSNDPPFTPLRDPIPKTSSLLVLSEETPIPTPGCLHSSHLLRDDGPPSTPALDPNPKTASLDVLNEEIPIPKPETDPSSHLFPDNGPPLTPPRDTIPKFSSLPTPREETGLPKPKSLQSSLLLPDSNGGHHPTIIQSNFSLPSRKPKWSKRSKLFLRFLRPSARSSLFAARVAEFFHGYRSNSPNSPYKHRFFMTWISSVAFGPRELFAVESLFKSHQNACLLIVSNTMDSGRGEKLLRPFTERAFQVVAVSPDLGYLFKNTPAERWFNRLLRGEIDPGEVSLGQNLSNLLRLAILYKYGGVYIDTDVIVVRSFDGLRNAIGAQTADAETGNWSRLNNAVMVFDEKHPLVYEFIEEFARTFDGSKWGHNGPYLVSRVVARVAGRPGFEFRILPPAAFYPVDWSRIRGLFRGPRDGSHFKWVVAKHKWIHGESFALHLWNRQSKRMKVEEGSVIGRIMSDCCLFCNSSRNAIPVVTKGRLEDEVMII
SIO_010081: LOC105053509
subclass of: SO_0000673
so part of: LOC105053509
location: complement(553854..555434)
location: region:553854-555434:-1
so has part: feature:553854-555434:-1:exon

XP_010933001.1
type: Protein
SIO_000068: ncbiprotein

position:553854:-1
position: 553854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555434:-1
position: 555434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553854-555434:-1:exon

LOC105053507
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053507
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 779259..789941
location: region:779259-789941:1
so has part: feature:779259-789941:1:exon
subclass of: SO_0000010

105053507
type: Gene
SIO_000068: ncbigene

position:779259:1
position: 779259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789941:1
position: 789941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779259-789941:1:exon

LOC105053507
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053507
product: WD repeat-containing protein 44-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_010934696.2
SIO_010081: LOC105053507
subclass of: SO_0000673
so part of: LOC105053507
location: join(779259..780923,782995..783085,783190..783347,783471..783522,783688..783770,783899..783992,789052..789941)
location: region:779259-789941:1
so has part: feature:779259-780923:1:exon
so has part: feature:782995-783085:1:exon
so has part: feature:783190-783347:1:exon
so has part: feature:783471-783522:1:exon
so has part: feature:783688-783770:1:exon
so has part: feature:783899-783992:1:exon
so has part: feature:789052-789941:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:779259-780923:1:exon

position:780923:1
position: 780923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:782995-783085:1:exon

position:782995:1
position: 782995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783085:1
position: 783085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:783190-783347:1:exon

position:783190:1
position: 783190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783347:1
position: 783347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:783471-783522:1:exon

position:783471:1
position: 783471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783522:1
position: 783522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:783688-783770:1:exon

position:783688:1
position: 783688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783770:1
position: 783770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:783899-783992:1:exon

position:783899:1
position: 783899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783992:1
position: 783992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:789052-789941:1:exon

position:789052:1
position: 789052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053507
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053507
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: WD repeat-containing protein 44-like
translation: MNNSEQEEEFYESLDRILSSSCSSTSASDDDAHPCRRRRHLPRFPPPSSVSLDVWISEPASIEERRQRLFQQLGLAGDPALARRKAPAADGPPGEARTRTGVVGRSVSCDGLRPRPASASSAAAAIGRSRSAGSVDPSHVYDHQQQLHQRSLPVSGKPPLVGRTRPSSVGNLDGDEDPRCLIRNLDNGSEFVVKEFREDGMWNKLREVGTGRQLTIEEFEMCVGLSPIVQEFMRRQKVVGSSPPGGAGSTGGMTLKKRGSWLRSIKNAAGSVVAGCHHRDRQSSNDTDTLSEKGERRWSSHSVHHGPERTKVRQYGKSHKELTGLFMSQEIQAHNGSIWTIKFSLDGRYLASAGEDCVIHVWEVTEYESKGELLEDNGNCNPFVSSIINGSPEPTLSLACVEGHHWEKKRREKVPGISKSVSSDHLMVPDHLFALSEKPVCSFRGHQDDVLNLSWSKSQYLLSSSMDKTVRLWHMSSYSCLKTFSHSDYVTCIQFNPVDDRYFISGSLDEKVRIWSIPDREIVDWNDLHEMVTAACYTPDGQGALIGSHKGSCHLYDTSDNKLIQKCQIDLQNKKKKSSHKKITGFQFTPGRSSTVLITSADSRIRVIDGVELVHKFKGFRNRSSQISACVTTNGKYVICASEDSHVYVWNYDDDSRPSRSKAIVAVTESYEHFHCRDVTAAVPWPNTIMGGKLGMRCNGPDGVSNAHSQMLEEADGHQHSPLPAYRYIDTNTANYGDKVSATWPEELMAASKQRLHGSGEIFSGGMPGQSRAAWGLVIVTAHRRGEIRTFQNFGFSVRV
SIO_010081: LOC105053507
subclass of: SO_0000673
so part of: LOC105053507
location: join(779547..780923,782995..783085,783190..783347,783471..783522,783688..783770,783899..783992,789052..789600)
location: region:779547-789600:1
so has part: feature:779547-780923:1:exon
so has part: feature:782995-783085:1:exon
so has part: feature:783190-783347:1:exon
so has part: feature:783471-783522:1:exon
so has part: feature:783688-783770:1:exon
so has part: feature:783899-783992:1:exon
so has part: feature:789052-789600:1:exon

XP_010932998.1
type: Protein
SIO_000068: ncbiprotein

position:779547:1
position: 779547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789600:1
position: 789600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779547-780923:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:782995-783085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:783190-783347:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:783471-783522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:783688-783770:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:783899-783992:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:789052-789600:1:exon

LOC105053510
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 833357..835952
location: region:833357-835952:1
so has part: feature:833357-835952:1:exon

105053510
type: Gene
SIO_000068: ncbigene

position:833357:1
position: 833357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835952:1
position: 835952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833357-835952:1:exon

LOC105053510
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053510
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105053510
subclass of: SO_0000673
so part of: LOC105053510
location: 833357..833448
location: region:833357-833448:1
so has part: feature:833357-833448:1:exon

position:833448:1
position: 833448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833357-833448:1:exon

LOC105053510
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053510
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105053510
subclass of: SO_0000673
so part of: LOC105053510
location: 833553..833691
location: region:833553-833691:1
so has part: feature:833553-833691:1:exon

position:833553:1
position: 833553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833691:1
position: 833691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833553-833691:1:exon

LOC105053510
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053510
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105053510
subclass of: SO_0000673
so part of: LOC105053510
location: 834632..835150
location: region:834632-835150:1
so has part: feature:834632-835150:1:exon

position:834632:1
position: 834632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835150:1
position: 835150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:834632-835150:1:exon

LOC105053510
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053510
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105053510
subclass of: SO_0000673
so part of: LOC105053510
location: 835324..835666
location: region:835324-835666:1
so has part: feature:835324-835666:1:exon

position:835324:1
position: 835324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835666:1
position: 835666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835324-835666:1:exon

LOC105053510
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053510
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105053510
subclass of: SO_0000673
so part of: LOC105053510
location: 835794..835952
location: region:835794-835952:1
so has part: feature:835794-835952:1:exon

position:835794:1
position: 835794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835794-835952:1:exon

LOC105053508
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(921438..949397)
location: region:921438-949397:-1
so has part: feature:921438-949397:-1:exon
subclass of: SO_0000010

105053508
type: Gene
SIO_000068: ncbigene

position:921438:-1
position: 921438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949397:-1
position: 949397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921438-949397:-1:exon

LOC105053508
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053508
product: RNA polymerase II C-terminal domain phosphatase-like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_010934698.3
SIO_010081: LOC105053508
subclass of: SO_0000673
so part of: LOC105053508
location: complement(join(921438..922387,923585..923658,924263..924328,931542..931628,931721..931839,932723..932819,933906..933959,934058..934191,941443..941506,941596..942171,942327..942410,942482..942587,942738..942808,942915..943072,943279..943489,943918..944394,948361..949397))
location: region:921438-949397:-1
so has part: feature:948361-949397:-1:exon
so has part: feature:943918-944394:-1:exon
so has part: feature:943279-943489:-1:exon
so has part: feature:942915-943072:-1:exon
so has part: feature:942738-942808:-1:exon
so has part: feature:942482-942587:-1:exon
so has part: feature:942327-942410:-1:exon
so has part: feature:941596-942171:-1:exon
so has part: feature:941443-941506:-1:exon
so has part: feature:934058-934191:-1:exon
so has part: feature:933906-933959:-1:exon
so has part: feature:932723-932819:-1:exon
so has part: feature:931721-931839:-1:exon
so has part: feature:931542-931628:-1:exon
so has part: feature:924263-924328:-1:exon
so has part: feature:923585-923658:-1:exon
so has part: feature:921438-922387:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:948361-949397:-1:exon

position:948361:-1
position: 948361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:943918-944394:-1:exon

position:943918:-1
position: 943918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944394:-1
position: 944394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:943279-943489:-1:exon

position:943279:-1
position: 943279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943489:-1
position: 943489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:942915-943072:-1:exon

position:942915:-1
position: 942915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943072:-1
position: 943072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:942738-942808:-1:exon

position:942738:-1
position: 942738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942808:-1
position: 942808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:942482-942587:-1:exon

position:942482:-1
position: 942482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942587:-1
position: 942587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:942327-942410:-1:exon

position:942327:-1
position: 942327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942410:-1
position: 942410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:941596-942171:-1:exon

position:941596:-1
position: 941596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942171:-1
position: 942171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:941443-941506:-1:exon

position:941443:-1
position: 941443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941506:-1
position: 941506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:934058-934191:-1:exon

position:934058:-1
position: 934058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934191:-1
position: 934191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:933906-933959:-1:exon

position:933906:-1
position: 933906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933959:-1
position: 933959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:932723-932819:-1:exon

position:932723:-1
position: 932723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932819:-1
position: 932819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:931721-931839:-1:exon

position:931721:-1
position: 931721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931839:-1
position: 931839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:931542-931628:-1:exon

position:931542:-1
position: 931542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931628:-1
position: 931628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:924263-924328:-1:exon

position:924263:-1
position: 924263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:924328:-1
position: 924328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:923585-923658:-1:exon

position:923585:-1
position: 923585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923658:-1
position: 923658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:921438-922387:-1:exon

position:922387:-1
position: 922387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053508
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053508
product: RNA polymerase II C-terminal domain phosphatase-like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_010934697.3
SIO_010081: LOC105053508
subclass of: SO_0000673
so part of: LOC105053508
location: complement(join(921438..922387,923585..923658,924263..924328,931542..931628,931721..931956,932723..932819,933906..933959,934058..934191,941443..941506,941596..942171,942327..942410,942482..942587,942738..942808,942915..943072,943279..943489,943918..944394,948361..949396))
location: region:921438-949396:-1
so has part: feature:948361-949396:-1:exon
so has part: feature:943918-944394:-1:exon
so has part: feature:943279-943489:-1:exon
so has part: feature:942915-943072:-1:exon
so has part: feature:942738-942808:-1:exon
so has part: feature:942482-942587:-1:exon
so has part: feature:942327-942410:-1:exon
so has part: feature:941596-942171:-1:exon
so has part: feature:941443-941506:-1:exon
so has part: feature:934058-934191:-1:exon
so has part: feature:933906-933959:-1:exon
so has part: feature:932723-932819:-1:exon
so has part: feature:931721-931956:-1:exon
so has part: feature:931542-931628:-1:exon
so has part: feature:924263-924328:-1:exon
so has part: feature:923585-923658:-1:exon
so has part: feature:921438-922387:-1:exon

position:949396:-1
position: 949396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948361-949396:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:943918-944394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:943279-943489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:942915-943072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:942738-942808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:942482-942587:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:942327-942410:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:941596-942171:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:941443-941506:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:934058-934191:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:933906-933959:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:932723-932819:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:931721-931956:-1:exon

position:931956:-1
position: 931956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:931542-931628:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:924263-924328:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:923585-923658:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:921438-922387:-1:exon

LOC105053508
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase II C-terminal domain phosphatase-like 1 isoform X2
translation: MFKSAVYHGNSLIGEAEIFPQNSNPGAWVREIRISHFSPSSERCPPLAVLHTIASGGVSFKMESKSAPSDESPLCSLHAACLRENKTAVIPLGEEELHLVAMNSRKNLMQYACFWGFNVASGLYNSCLGMLNLRCLGIVFDLDETLIVANTLRSFEDRIDALQRKISTETDPQRVTGMLAELKRYQDDKSILKQYAEIDQVVENGKVYQVQSEVVPPLSDSHHLITRPVLRLQEKNIILTRVNPSIRDTSVLVRLRPAWEELRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPDSSLISSTRLIDRIVCVKSGSRKSLLSVFQDGICHPKMALVIDDRLKVWDEKDQPRVHVVPAFAPYYAPQAEANGNVPVLCVARNVACNVRGGFFKEFDEGLLPRISDIFYEDEWKDFPSAPDVGNYLISEDDNATSIGNKDQLCFKGMTDAEVERRLKEANCNVQAVHPMVNNLDLRSASSIQHVMASSSAVPPLTATQAMMPLPNNQCSQPIALGRPLVCQPGLPEPSLQGSPAREEGEVPESELDPDTRRRLLILQHGQDTRDPTPPFTVRSPLHEAVPPVQSQGNWFPMEEEMNPKQLNRAPKEFTVEPETVHVNKKRPHHQSYFRSGENSISSERVLHENQRLPMQLHPGDDRLRPNHAAANYNCFPGEEMPAGLISSSHRGLQFEPGWAIAQCAETPAGVLQNIAMKCGAKVEFRTALCDTTELKFCMEVWFVGEKVGEGIGKTRKEAHQQAAEISLRTLAACARDDVLPVASTSEESRFMDQRLEGSNKTATSVAVLKELCTIEGFTLGFQAPTSPSASSVSKGEVYAQVEVAGQIVGIGVGTTWEEAKLKAAEEALGTLKSMLGQFTHKRSGSPRSPSATPNKRLKPDFSRVLQRIPSSGRYSRSETPVPR
SIO_010081: LOC105053508
subclass of: SO_0000673
so part of: LOC105053508
location: complement(join(922276..922387,923585..923658,924263..924328,931542..931628,931721..931839,932723..932819,933906..933959,934058..934191,941443..941506,941596..942171,942327..942410,942482..942587,942738..942808,942915..943072,943279..943489,943918..944394,948361..948618))
location: region:922276-948618:-1
so has part: feature:948361-948618:-1:exon
so has part: feature:943918-944394:-1:exon
so has part: feature:943279-943489:-1:exon
so has part: feature:942915-943072:-1:exon
so has part: feature:942738-942808:-1:exon
so has part: feature:942482-942587:-1:exon
so has part: feature:942327-942410:-1:exon
so has part: feature:941596-942171:-1:exon
so has part: feature:941443-941506:-1:exon
so has part: feature:934058-934191:-1:exon
so has part: feature:933906-933959:-1:exon
so has part: feature:932723-932819:-1:exon
so has part: feature:931721-931839:-1:exon
so has part: feature:931542-931628:-1:exon
so has part: feature:924263-924328:-1:exon
so has part: feature:923585-923658:-1:exon
so has part: feature:922276-922387:-1:exon

XP_010933000.1
type: Protein
SIO_000068: ncbiprotein

position:922276:-1
position: 922276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948618:-1
position: 948618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948361-948618:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:943918-944394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:943279-943489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:942915-943072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:942738-942808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:942482-942587:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:942327-942410:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:941596-942171:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:941443-941506:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:934058-934191:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:933906-933959:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:932723-932819:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:931721-931839:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:931542-931628:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:924263-924328:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:923585-923658:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:922276-922387:-1:exon

LOC105053508
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
translation: MFKSAVYHGNSLIGEAEIFPQNSNPGAWVREIRISHFSPSSERCPPLAVLHTIASGGVSFKMESKSAPSDESPLCSLHAACLRENKTAVIPLGEEELHLVAMNSRKNLMQYACFWGFNVASGLYNSCLGMLNLRCLGIVFDLDETLIVANTLRSFEDRIDALQRKISTETDPQRVTGMLAELKRYQDDKSILKQYAEIDQVVENGKVYQVQSEVVPPLSDSHHLITRPVLRLQEKNIILTRVNPSIRDTSVLVRLRPAWEELRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPDSSLISSTRLIDRIVCVKSGSRKSLLSVFQDGICHPKMALVIDDRLKVWDEKDQPRVHVVPAFAPYYAPQAEANGNVPVLCVARNVACNVRGGFFKEFDEGLLPRISDIFYEDEWKDFPSAPDVGNYLISEDDNATSIGNKDQLCFKGMTDAEVERRLKEANCNVQAVHPMVNNLDLRSASSIQHVMASSSAVPPLTATQAMMPLPNNQCSQPIALGRPLVCQPGLPEPSLQGSPAREEGEVPESELDPDTRRRLLILQHGQDTRDPTPPFTVRSPLHEAVPPVQSQGNWFPMEEEMNPKQLNRAPKEFTVEPETVHVNKKRPHHQSYFRSGENSISSERVLHENQRLPMQLHPGDDRLRPNHAAANYNCFPGEEMPAGLISSSHRGLQFEPGWAIAQCAETPAGVLQNIAMKCGAKVEFRTALCDTTELKFCMEVWFVGEKVGEGIGKTRKEAHQQAAEISLRTLADKYLSNARSDSNTLHGDMHKPSHIKENGFISDLNSFGYPACARDDVLPVASTSEESRFMDQRLEGSNKTATSVAVLKELCTIEGFTLGFQAPTSPSASSVSKGEVYAQVEVAGQIVGIGVGTTWEEAKLKAAEEALGTLKSMLGQFTHKRSGSPRSPSATPNKRLKPDFSRVLQRIPSSGRYSRSETPVPR
SIO_010081: LOC105053508
subclass of: SO_0000673
so part of: LOC105053508
location: complement(join(922276..922387,923585..923658,924263..924328,931542..931628,931721..931956,932723..932819,933906..933959,934058..934191,941443..941506,941596..942171,942327..942410,942482..942587,942738..942808,942915..943072,943279..943489,943918..944394,948361..948618))
location: region:922276-948618:-1
so has part: feature:948361-948618:-1:exon
so has part: feature:943918-944394:-1:exon
so has part: feature:943279-943489:-1:exon
so has part: feature:942915-943072:-1:exon
so has part: feature:942738-942808:-1:exon
so has part: feature:942482-942587:-1:exon
so has part: feature:942327-942410:-1:exon
so has part: feature:941596-942171:-1:exon
so has part: feature:941443-941506:-1:exon
so has part: feature:934058-934191:-1:exon
so has part: feature:933906-933959:-1:exon
so has part: feature:932723-932819:-1:exon
so has part: feature:931721-931956:-1:exon
so has part: feature:931542-931628:-1:exon
so has part: feature:924263-924328:-1:exon
so has part: feature:923585-923658:-1:exon
so has part: feature:922276-922387:-1:exon

XP_010932999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:948361-948618:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:943918-944394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:943279-943489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:942915-943072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:942738-942808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:942482-942587:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:942327-942410:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:941596-942171:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:941443-941506:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:934058-934191:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:933906-933959:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:932723-932819:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:931721-931956:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:931542-931628:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:924263-924328:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:923585-923658:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:922276-922387:-1:exon

LOC114914646
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC114914646
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(966359..966463)
location: region:966359-966463:-1
so has part: feature:966359-966463:-1:exon
subclass of: SO_0000578

114914646
type: Gene
SIO_000068: ncbigene

position:966359:-1
position: 966359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966463:-1
position: 966463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:966359-966463:-1:exon

LOC114914646
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51953
nc RNA class: snoRNA
gene: LOC114914646
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003802185.1
SIO_010081: LOC114914646
subclass of: SO_0000673
so part of: LOC114914646
location: complement(966359..966463)
location: region:966359-966463:-1
so has part: feature:966359-966463:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:966359-966463:-1:exon

LOC114914648
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC114914648
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1213186..1213291
location: region:1213186-1213291:1
so has part: feature:1213186-1213291:1:exon
subclass of: SO_0000578

114914648
type: Gene
SIO_000068: ncbigene

position:1213186:1
position: 1213186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1213291:1
position: 1213291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1213186-1213291:1:exon

LOC114914648
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51953
nc RNA class: snoRNA
gene: LOC114914648
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003802187.1
SIO_010081: LOC114914648
subclass of: SO_0000673
so part of: LOC114914648
location: 1213186..1213291
location: region:1213186-1213291:1
so has part: feature:1213186-1213291:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1213186-1213291:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 51953
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1220339..1220438
location: region:1220339-1220438:1
so has part: feature:1220339-1220438:1:region

position:1220339:1
position: 1220339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220438:1
position: 1220438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1220339-1220438:1:region

LOC105053511
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053511
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1275661..1281100
location: region:1275661-1281100:1
so has part: feature:1275661-1281100:1:exon
subclass of: SO_0000010

105053511
type: Gene
SIO_000068: ncbigene

position:1275661:1
position: 1275661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281100:1
position: 1281100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1275661-1281100:1:exon

LOC105053511
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053511
product: protein BOLA4, chloroplastic/mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_010934701.3
SIO_010081: LOC105053511
subclass of: SO_0000673
so part of: LOC105053511
location: join(1275661..1276110,1277196..1277263,1280743..1281100)
location: region:1275661-1281100:1
so has part: feature:1275661-1276110:1:exon
so has part: feature:1277196-1277263:1:exon
so has part: feature:1280743-1281100:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1275661-1276110:1:exon

position:1276110:1
position: 1276110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1277196-1277263:1:exon

position:1277196:1
position: 1277196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1277263:1
position: 1277263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1280743-1281100:1:exon

position:1280743:1
position: 1280743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053511
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053511
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BOLA4, chloroplastic/mitochondrial
translation: MRSSSYSLASLFRRCVASPLPPSSSLYSSSVVLPSVPVSASVSFLRSGRIPPPPHSAAARLELRRGGPTRYGGAAARRLCGVRAAHVSDSGSIDSPMMQSMEKKIKEQLDADVVIVKDAYGDGRHVSIDVISKAFEGQSTVNRQRMVYKAIWEELQSTVHAVDQMTTRTPSEAAAEN
SIO_010081: LOC105053511
subclass of: SO_0000673
so part of: LOC105053511
location: join(1275799..1276110,1277196..1277263,1280743..1280896)
location: region:1275799-1280896:1
so has part: feature:1275799-1276110:1:exon
so has part: feature:1277196-1277263:1:exon
so has part: feature:1280743-1280896:1:exon

XP_010933003.1
type: Protein
SIO_000068: ncbiprotein

position:1275799:1
position: 1275799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280896:1
position: 1280896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1275799-1276110:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1277196-1277263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280743-1280896:1:exon

LOC105053512
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1329013..1332210)
location: region:1329013-1332210:-1
so has part: feature:1329013-1332210:-1:exon
subclass of: SO_0000010

105053512
type: Gene
SIO_000068: ncbigene

position:1329013:-1
position: 1329013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1332210:-1
position: 1332210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1329013-1332210:-1:exon

LOC105053512
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053512
product: abscisic acid 8'-hydroxylase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_010934702.3
SIO_010081: LOC105053512
subclass of: SO_0000673
so part of: LOC105053512
location: complement(join(1329013..1329637,1329771..1329889,1329979..1330085,1330181..1330355,1330457..1330843,1331288..1331606,1331713..1332210))
location: region:1329013-1332210:-1
so has part: feature:1331713-1332210:-1:exon
so has part: feature:1331288-1331606:-1:exon
so has part: feature:1330457-1330843:-1:exon
so has part: feature:1330181-1330355:-1:exon
so has part: feature:1329979-1330085:-1:exon
so has part: feature:1329771-1329889:-1:exon
so has part: feature:1329013-1329637:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1331713-1332210:-1:exon

position:1331713:-1
position: 1331713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1331288-1331606:-1:exon

position:1331288:-1
position: 1331288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1331606:-1
position: 1331606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1330457-1330843:-1:exon

position:1330457:-1
position: 1330457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1330843:-1
position: 1330843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1330181-1330355:-1:exon

position:1330181:-1
position: 1330181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1330355:-1
position: 1330355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1329979-1330085:-1:exon

position:1329979:-1
position: 1329979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1330085:-1
position: 1330085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1329771-1329889:-1:exon

position:1329771:-1
position: 1329771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1329889:-1
position: 1329889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1329013-1329637:-1:exon

position:1329637:-1
position: 1329637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053512
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: abscisic acid 8'-hydroxylase 1
translation: MKNSTAGTTISTSTTIAMLPLLPSLLLCLLSLLYFLLARAKKQRSSATTATPRKLPLPPGSMGWPYIGETFQLYSSNPNTFFALKHKKYGPVFKTHILGCPCVMVSSPEAARFVLVTQAHLFKPTYPASKERMLGTKAIFFQQGDYHARLRRIVLRAFLPDAIRRRVAGIEAVALQALHSWDGRMINTFQEMKTYAFNVALLSIFGKDEISYIEELKQCYYTLEKGYNSMPINLPGTLFHKAMKARKQLGHIVAKILSSRRQKKAVADDLLGFFMESKEALTDDQIVDNIVGVIFAARDTTASVLTWIVKYLGENPSILQAVTEEQEEIMRSKEMGGGEVSLTWADTKRMSMTSRVIQETMRVASILSFTFREVVEDVEYEGYLIPKGWKVLPLFRNIHHSPDNFTDPEKFDPSRFEVAPKPNTFMPFGNGTHSCPGNELAKLEMLVLLHHLTTKYRWSMSGSESGIQFGPFALPLNGLPMRFCRKT
SIO_010081: LOC105053512
subclass of: SO_0000673
so part of: LOC105053512
location: complement(join(1329544..1329637,1329771..1329889,1329979..1330085,1330181..1330355,1330457..1330843,1331288..1331606,1331713..1331975))
location: region:1329544-1331975:-1
so has part: feature:1331713-1331975:-1:exon
so has part: feature:1331288-1331606:-1:exon
so has part: feature:1330457-1330843:-1:exon
so has part: feature:1330181-1330355:-1:exon
so has part: feature:1329979-1330085:-1:exon
so has part: feature:1329771-1329889:-1:exon
so has part: feature:1329544-1329637:-1:exon

XP_010933004.1
type: Protein
SIO_000068: ncbiprotein

position:1329544:-1
position: 1329544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1331975:-1
position: 1331975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1331713-1331975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1331288-1331606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1330457-1330843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1330181-1330355:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1329979-1330085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1329771-1329889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1329544-1329637:-1:exon

LOC105053513
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1389462..1401008
location: region:1389462-1401008:1
so has part: feature:1389462-1401008:1:exon
subclass of: SO_0000010

105053513
type: Gene
SIO_000068: ncbigene

position:1389462:1
position: 1389462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1401008:1
position: 1401008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389462-1401008:1:exon

LOC105053513
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053513
product: protein decapping 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_019853526.2
SIO_010081: LOC105053513
subclass of: SO_0000673
so part of: LOC105053513
location: join(1389462..1389926,1390422..1390522,1392070..1392138,1392227..1393054,1398362..1398562,1399757..1399867,1399955..1400235,1400348..1400457,1400627..1401008)
location: region:1389462-1401008:1
so has part: feature:1389462-1389926:1:exon
so has part: feature:1390422-1390522:1:exon
so has part: feature:1392070-1392138:1:exon
so has part: feature:1392227-1393054:1:exon
so has part: feature:1398362-1398562:1:exon
so has part: feature:1399757-1399867:1:exon
so has part: feature:1399955-1400235:1:exon
so has part: feature:1400348-1400457:1:exon
so has part: feature:1400627-1401008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1389462-1389926:1:exon

position:1389926:1
position: 1389926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1390422-1390522:1:exon

position:1390422:1
position: 1390422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390522:1
position: 1390522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1392070-1392138:1:exon

position:1392070:1
position: 1392070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1392138:1
position: 1392138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1392227-1393054:1:exon

position:1392227:1
position: 1392227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1393054:1
position: 1393054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1398362-1398562:1:exon

position:1398362:1
position: 1398362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1398562:1
position: 1398562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1399757-1399867:1:exon

position:1399757:1
position: 1399757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1399867:1
position: 1399867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1399955-1400235:1:exon

position:1399955:1
position: 1399955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400235:1
position: 1400235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1400348-1400457:1:exon

position:1400348:1
position: 1400348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400457:1
position: 1400457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1400627-1401008:1:exon

position:1400627:1
position: 1400627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053513
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053513
product: protein decapping 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_010934704.2
SIO_010081: LOC105053513
subclass of: SO_0000673
so part of: LOC105053513
location: join(1389462..1389926,1390422..1390522,1392070..1392138,1392227..1393054,1398362..1398562,1399757..1399867,1399955..1400235,1400348..1400457,1400632..1401008)
location: region:1389462-1401008:1
so has part: feature:1389462-1389926:1:exon
so has part: feature:1390422-1390522:1:exon
so has part: feature:1392070-1392138:1:exon
so has part: feature:1392227-1393054:1:exon
so has part: feature:1398362-1398562:1:exon
so has part: feature:1399757-1399867:1:exon
so has part: feature:1399955-1400235:1:exon
so has part: feature:1400348-1400457:1:exon
so has part: feature:1400632-1401008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1389462-1389926:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1390422-1390522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1392070-1392138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1392227-1393054:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1398362-1398562:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1399757-1399867:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399955-1400235:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400348-1400457:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1400632-1401008:1:exon

position:1400632:1
position: 1400632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053513
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053513
product: protein decapping 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_010934703.3
SIO_010081: LOC105053513
subclass of: SO_0000673
so part of: LOC105053513
location: join(1389462..1389926,1390422..1390522,1392070..1392138,1392227..1393054,1398362..1398562,1399757..1399867,1399955..1400235,1400348..1400593)
location: region:1389462-1400593:1
so has part: feature:1389462-1389926:1:exon
so has part: feature:1390422-1390522:1:exon
so has part: feature:1392070-1392138:1:exon
so has part: feature:1392227-1393054:1:exon
so has part: feature:1398362-1398562:1:exon
so has part: feature:1399757-1399867:1:exon
so has part: feature:1399955-1400235:1:exon
so has part: feature:1400348-1400593:1:exon

position:1400593:1
position: 1400593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389462-1389926:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1390422-1390522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1392070-1392138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1392227-1393054:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1398362-1398562:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1399757-1399867:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399955-1400235:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400348-1400593:1:exon

LOC105053513
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein decapping 5
translation: MAAAEGSSTGSSQSSSSSSRAADSYIGSLISLTSKAEIRYEGVLVSINPQESTIALQNVRSYGTEGRKKDGPQIPPSDRVYEYILFRGSDIKDLLVKSSPVLTKPQAYNDPAIIQSCNAYAPSTSASVGGGALPGQGSHAAQSSLARSSYSDAFSLYQSGATLSSGASSPAFSNVNRTSFSTPMYWQGYAGVLDGQSPKQQLFHSQPPSGMVQDQLHLPESQAPTSMPNFTEPTHLTFTSAATSSHFAISTPSDVFLSVSSDPSQLSHPLSPLSYSRTKSSFSSSNQELNASMRSVSTKAGSSAIPVLPMPSLSYSSSSILGSTTSPLTTLPPLLTPDQFTQSRPTASSSNQRLTPEREDMAAVLPPSNPPSSVKPLPQEPLLPLQLSSQQGQGRMAQFTEEFDFTSMNEKFNKDEVWGSLGKAKLRSTIGNGMEENPIHDNVEVEEGYGQDPKLGRNPVYNKDNFFDNLSCNSLNRGSWSGRMKFSERMKLDTETFGEFQQGAHLGRGNHGPAHPGNFRGSYNRGRGYGYYYGGRGHGGYRPV
SIO_010081: LOC105053513
subclass of: SO_0000673
so part of: LOC105053513
location: join(1389752..1389926,1390422..1390522,1392070..1392138,1392227..1393054,1398362..1398562,1399757..1399867,1399955..1400104)
location: region:1389752-1400104:1
so has part: feature:1389752-1389926:1:exon
so has part: feature:1390422-1390522:1:exon
so has part: feature:1392070-1392138:1:exon
so has part: feature:1392227-1393054:1:exon
so has part: feature:1398362-1398562:1:exon
so has part: feature:1399757-1399867:1:exon
so has part: feature:1399955-1400104:1:exon

XP_019709085.1
type: Protein
SIO_000068: ncbiprotein

position:1389752:1
position: 1389752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400104:1
position: 1400104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389752-1389926:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1390422-1390522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1392070-1392138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1392227-1393054:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1398362-1398562:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1399757-1399867:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399955-1400104:1:exon

LOC105053513
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein decapping 5
translation: MAAAEGSSTGSSQSSSSSSRAADSYIGSLISLTSKAEIRYEGVLVSINPQESTIALQNVRSYGTEGRKKDGPQIPPSDRVYEYILFRGSDIKDLLVKSSPVLTKPQAYNDPAIIQSCNAYAPSTSASVGGGALPGQGSHAAQSSLARSSYSDAFSLYQSGATLSSGASSPAFSNVNRTSFSTPMYWQGYAGVLDGQSPKQQLFHSQPPSGMVQDQLHLPESQAPTSMPNFTEPTHLTFTSAATSSHFAISTPSDVFLSVSSDPSQLSHPLSPLSYSRTKSSFSSSNQELNASMRSVSTKAGSSAIPVLPMPSLSYSSSSILGSTTSPLTTLPPLLTPDQFTQSRPTASSSNQRLTPEREDMAAVLPPSNPPSSVKPLPQEPLLPLQLSSQQGQGRMAQFTEEFDFTSMNEKFNKDEVWGSLGKAKLRSTIGNGMEENPIHDNVEVEEGYGQDPKLGRNPVYNKDNFFDNLSCNSLNRGSWSGRMKFSERMKLDTETFGEFQQGAHLGRGNHGPAHPGNFRGSYNRGRGYGYYYGGRGHGGYRPV
SIO_010081: LOC105053513
subclass of: SO_0000673
so part of: LOC105053513
location: join(1389752..1389926,1390422..1390522,1392070..1392138,1392227..1393054,1398362..1398562,1399757..1399867,1399955..1400104)
location: region:1389752-1400104:1
so has part: feature:1389752-1389926:1:exon
so has part: feature:1390422-1390522:1:exon
so has part: feature:1392070-1392138:1:exon
so has part: feature:1392227-1393054:1:exon
so has part: feature:1398362-1398562:1:exon
so has part: feature:1399757-1399867:1:exon
so has part: feature:1399955-1400104:1:exon

XP_010933005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1389752-1389926:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1390422-1390522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1392070-1392138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1392227-1393054:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1398362-1398562:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1399757-1399867:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399955-1400104:1:exon

LOC105053513
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein decapping 5
translation: MAAAEGSSTGSSQSSSSSSRAADSYIGSLISLTSKAEIRYEGVLVSINPQESTIALQNVRSYGTEGRKKDGPQIPPSDRVYEYILFRGSDIKDLLVKSSPVLTKPQAYNDPAIIQSCNAYAPSTSASVGGGALPGQGSHAAQSSLARSSYSDAFSLYQSGATLSSGASSPAFSNVNRTSFSTPMYWQGYAGVLDGQSPKQQLFHSQPPSGMVQDQLHLPESQAPTSMPNFTEPTHLTFTSAATSSHFAISTPSDVFLSVSSDPSQLSHPLSPLSYSRTKSSFSSSNQELNASMRSVSTKAGSSAIPVLPMPSLSYSSSSILGSTTSPLTTLPPLLTPDQFTQSRPTASSSNQRLTPEREDMAAVLPPSNPPSSVKPLPQEPLLPLQLSSQQGQGRMAQFTEEFDFTSMNEKFNKDEVWGSLGKAKLRSTIGNGMEENPIHDNVEVEEGYGQDPKLGRNPVYNKDNFFDNLSCNSLNRGSWSGRMKFSERMKLDTETFGEFQQGAHLGRGNHGPAHPGNFRGSYNRGRGYGYYYGGRGHGGYRPV
SIO_010081: LOC105053513
subclass of: SO_0000673
so part of: LOC105053513
location: join(1389752..1389926,1390422..1390522,1392070..1392138,1392227..1393054,1398362..1398562,1399757..1399867,1399955..1400104)
location: region:1389752-1400104:1
so has part: feature:1389752-1389926:1:exon
so has part: feature:1390422-1390522:1:exon
so has part: feature:1392070-1392138:1:exon
so has part: feature:1392227-1393054:1:exon
so has part: feature:1398362-1398562:1:exon
so has part: feature:1399757-1399867:1:exon
so has part: feature:1399955-1400104:1:exon

XP_010933006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1389752-1389926:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1390422-1390522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1392070-1392138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1392227-1393054:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1398362-1398562:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1399757-1399867:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399955-1400104:1:exon

LOC105053514
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053514
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1401405..1402920)
location: region:1401405-1402920:-1
so has part: feature:1401405-1402920:-1:exon
subclass of: SO_0000010

105053514
type: Gene
SIO_000068: ncbigene

position:1401405:-1
position: 1401405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1402920:-1
position: 1402920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1401405-1402920:-1:exon

LOC105053514
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053514
product: uncharacterized LOC105053514
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_010934708.3
SIO_010081: LOC105053514
subclass of: SO_0000673
so part of: LOC105053514
location: complement(join(1401405..1402044,1402126..1402322,1402439..1402920))
location: region:1401405-1402920:-1
so has part: feature:1402439-1402920:-1:exon
so has part: feature:1402126-1402322:-1:exon
so has part: feature:1401405-1402044:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1402439-1402920:-1:exon

position:1402439:-1
position: 1402439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1402126-1402322:-1:exon

position:1402126:-1
position: 1402126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1402322:-1
position: 1402322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1401405-1402044:-1:exon

position:1402044:-1
position: 1402044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053514
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053514
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053514
translation: MEKPRFGKLAIRIVVVFLGTVAFSCSLAAEFKKVKAKDMKLDGNLCSLPRSSAFGLGITALVCLSIAQIVGTSAVGTRLCSGERNARRSRTVSIIQLVSSWLSYGFAMVLLATGSSMNGGQPYGKGWMDGKCYIARNGVFGGAAILVVTTVVFILGFTFTAGTTTHLRNGADEEGGDHQQPK
SIO_010081: LOC105053514
subclass of: SO_0000673
so part of: LOC105053514
location: complement(join(1401798..1402044,1402126..1402322,1402439..1402543))
location: region:1401798-1402543:-1
so has part: feature:1402439-1402543:-1:exon
so has part: feature:1402126-1402322:-1:exon
so has part: feature:1401798-1402044:-1:exon

XP_010933010.1
type: Protein
SIO_000068: ncbiprotein

position:1401798:-1
position: 1401798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1402543:-1
position: 1402543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1402439-1402543:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1402126-1402322:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1401798-1402044:-1:exon

LOC105053515
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053515
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1446876..1466887
location: region:1446876-1466887:1
so has part: feature:1446876-1466887:1:exon
subclass of: SO_0000010

105053515
type: Gene
SIO_000068: ncbigene

position:1446876:1
position: 1446876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466887:1
position: 1466887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1446876-1466887:1:exon

LOC105053515
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053515
product: SAP-like protein BP-73, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_010934711.3
SIO_010081: LOC105053515
subclass of: SO_0000673
so part of: LOC105053515
location: join(1446876..1446994,1465634..1466887)
location: region:1446876-1466887:1
so has part: feature:1446876-1446994:1:exon
so has part: feature:1465634-1466887:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1446876-1446994:1:exon

position:1446994:1
position: 1446994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1465634-1466887:1:exon

position:1465634:1
position: 1465634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053515
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053515
product: SAP-like protein BP-73, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_010934709.3
SIO_010081: LOC105053515
subclass of: SO_0000673
so part of: LOC105053515
location: join(1446877..1446994,1465595..1466887)
location: region:1446877-1466887:1
so has part: feature:1446877-1446994:1:exon
so has part: feature:1465595-1466887:1:exon

position:1446877:1
position: 1446877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1446877-1446994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1465595-1466887:1:exon

position:1465595:1
position: 1465595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053515
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SAP-like protein BP-73 isoform X1
translation: MLGGYLVSDGKCLPCSGMSGRMSFPSYFHNGDPILYRGTNVLLKTFPVYGPRRVSFVCNSNNQRRSPDFSRRRKGSSGGKIKQFQDQENSENIEEANLSSSENGPLLSLVSNPRYQATATPGRREKEIVELFRKVQVQLRERAAIKEEKKIEAAQQGQAERGTVDSLLKLLRKHSVDQKKKSGGEEDFNLDQPERSNQFEDEQNSNIFGPNNITSEDVREPDPVPFTRPASNFRRKSPVPRVKFQSVLSAEEDVSFTSSLKSQEKERKTGNNEPQLAPDPESISLDGPDEVYFVDQSGTDGTSEETSKSSAIEENPDLGSLKLPELKGLAKSRGIKGYSKMKKGELLEVLGS
SIO_010081: LOC105053515
subclass of: SO_0000673
so part of: LOC105053515
location: join(1446985..1446994,1465595..1466643)
location: region:1446985-1466643:1
so has part: feature:1446985-1446994:1:exon
so has part: feature:1465595-1466643:1:exon

XP_010933011.1
type: Protein
SIO_000068: ncbiprotein

position:1446985:1
position: 1446985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466643:1
position: 1466643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1446985-1446994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1465595-1466643:1:exon

LOC105053515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053515
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SAP-like protein BP-73 isoform X2
translation: MLGGMSGRMSFPSYFHNGDPILYRGTNVLLKTFPVYGPRRVSFVCNSNNQRRSPDFSRRRKGSSGGKIKQFQDQENSENIEEANLSSSENGPLLSLVSNPRYQATATPGRREKEIVELFRKVQVQLRERAAIKEEKKIEAAQQGQAERGTVDSLLKLLRKHSVDQKKKSGGEEDFNLDQPERSNQFEDEQNSNIFGPNNITSEDVREPDPVPFTRPASNFRRKSPVPRVKFQSVLSAEEDVSFTSSLKSQEKERKTGNNEPQLAPDPESISLDGPDEVYFVDQSGTDGTSEETSKSSAIEENPDLGSLKLPELKGLAKSRGIKGYSKMKKGELLEVLGS
SIO_010081: LOC105053515
subclass of: SO_0000673
so part of: LOC105053515
location: join(1446985..1446994,1465634..1466643)
location: region:1446985-1466643:1
so has part: feature:1446985-1446994:1:exon
so has part: feature:1465634-1466643:1:exon

XP_010933013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1446985-1446994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1465634-1466643:1:exon

LOC105053516
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1538388..1548790
location: region:1538388-1548790:1
so has part: feature:1538388-1548790:1:exon
subclass of: SO_0000010

105053516
type: Gene
SIO_000068: ncbigene

position:1538388:1
position: 1538388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1548790:1
position: 1548790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1538388-1548790:1:exon

LOC105053516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053516
product: syntaxin-22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_010934712.3
SIO_010081: LOC105053516
subclass of: SO_0000673
so part of: LOC105053516
location: join(1538388..1538831,1544161..1544254,1546930..1547069,1547417..1547491,1547991..1548148,1548229..1548329,1548412..1548790)
location: region:1538388-1548790:1
so has part: feature:1538388-1538831:1:exon
so has part: feature:1544161-1544254:1:exon
so has part: feature:1546930-1547069:1:exon
so has part: feature:1547417-1547491:1:exon
so has part: feature:1547991-1548148:1:exon
so has part: feature:1548229-1548329:1:exon
so has part: feature:1548412-1548790:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1538388-1538831:1:exon

position:1538831:1
position: 1538831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1544161-1544254:1:exon

position:1544161:1
position: 1544161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1544254:1
position: 1544254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1546930-1547069:1:exon

position:1546930:1
position: 1546930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1547069:1
position: 1547069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1547417-1547491:1:exon

position:1547417:1
position: 1547417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1547491:1
position: 1547491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1547991-1548148:1:exon

position:1547991:1
position: 1547991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1548148:1
position: 1548148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1548229-1548329:1:exon

position:1548229:1
position: 1548229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1548329:1
position: 1548329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1548412-1548790:1:exon

position:1548412:1
position: 1548412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-22
translation: MSFEDVEAGRPLAGRRDLVNGRQDPTQAVTAGVFQITTAVATFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSAKLKQASETDHRAEVSASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYAPFVPQVVLPSRYTASEVDVSADKTPEQRALLVESRRQEVLQLDNEIVFNEAIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHDQGAMIDDIDSNIENSVAATAQAKTQLSKASKTQKSNSSLTCLLLVIFGVVLLIVIIVLAA
SIO_010081: LOC105053516
subclass of: SO_0000673
so part of: LOC105053516
location: join(1538644..1538831,1544161..1544254,1546930..1547069,1547417..1547491,1547991..1548148,1548229..1548329,1548412..1548477)
location: region:1538644-1548477:1
so has part: feature:1538644-1538831:1:exon
so has part: feature:1544161-1544254:1:exon
so has part: feature:1546930-1547069:1:exon
so has part: feature:1547417-1547491:1:exon
so has part: feature:1547991-1548148:1:exon
so has part: feature:1548229-1548329:1:exon
so has part: feature:1548412-1548477:1:exon

XP_010933014.1
type: Protein
SIO_000068: ncbiprotein

position:1538644:1
position: 1538644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1548477:1
position: 1548477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1538644-1538831:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1544161-1544254:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1546930-1547069:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1547417-1547491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1547991-1548148:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1548229-1548329:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1548412-1548477:1:exon

LOC105053551
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053551
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1579455..1580381
location: region:1579455-1580381:1
so has part: feature:1579455-1580381:1:exon

105053551
type: Gene
SIO_000068: ncbigene

position:1579455:1
position: 1579455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1580381:1
position: 1580381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1579455-1580381:1:exon

LOC105053551
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053551
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105053551
subclass of: SO_0000673
so part of: LOC105053551
location: 1579455..1580381
location: region:1579455-1580381:1
so has part: feature:1579455-1580381:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1579455-1580381:1:exon

LOC109506400
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC109506400
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1589693..1590052)
location: region:1589693-1590052:-1
so has part: feature:1589693-1590052:-1:exon
subclass of: SO_0000010

109506400
type: Gene
SIO_000068: ncbigene

position:1589693:-1
position: 1589693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590052:-1
position: 1590052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1589693-1590052:-1:exon

LOC109506400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC109506400
product: F-box protein AFR-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_019853639.1
SIO_010081: LOC109506400
subclass of: SO_0000673
so part of: LOC109506400
location: complement(1589693..1590052)
location: region:1589693-1590052:-1
so has part: feature:1589693-1590052:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1589693-1590052:-1:exon

LOC109506400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC109506400
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box protein AFR-like
translation: MPTPWFFFAVGRLVARSSQSRAAMVGISTVDCYDPTADRWLPATGMRYGMARYDATVVERQMCVIEGWRWPFYASPRAGVYDMDWDTWEEMSEGMRDGRIEASTIVGDRRLIITNYKDG
SIO_010081: LOC109506400
subclass of: SO_0000673
so part of: LOC109506400
location: complement(1589693..1590052)
location: region:1589693-1590052:-1
so has part: feature:1589693-1590052:-1:exon

XP_019709198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1589693-1590052:-1:exon

LOC105053518
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053518
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1643131..1644974)
location: region:1643131-1644974:-1
so has part: feature:1643131-1644974:-1:exon
subclass of: SO_0000010

105053518
type: Gene
SIO_000068: ncbigene

position:1643131:-1
position: 1643131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1644974:-1
position: 1644974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1643131-1644974:-1:exon

LOC105053518
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053518
product: benzyl alcohol O-benzoyltransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010934713.3
SIO_010081: LOC105053518
subclass of: SO_0000673
so part of: LOC105053518
location: complement(1643131..1644974)
location: region:1643131-1644974:-1
so has part: feature:1643131-1644974:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1643131-1644974:-1:exon

LOC105053518
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053518
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: benzyl alcohol O-benzoyltransferase
translation: MASSLTFKVRRHEPVLVAPAEPTPHEFKRLSDIDDQEGLRFQIPVIQFYRNDPSMAGRDPARVIREALAKTLVHYYPFAGRLREGARRKLVVECTGEGVLFIEADADVRLEQFGDALQPPFPCLEELLYNVEGSGEVLNAPLLLIQVIILQMIPHLFFFW
SIO_010081: LOC105053518
subclass of: SO_0000673
so part of: LOC105053518
location: complement(1644450..1644932)
location: region:1644450-1644932:-1
so has part: feature:1644450-1644932:-1:exon

XP_010933015.1
type: Protein
SIO_000068: ncbiprotein

position:1644450:-1
position: 1644450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1644932:-1
position: 1644932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1644450-1644932:-1:exon

LOC105053519
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1659803..1678994)
location: region:1659803-1678994:-1
so has part: feature:1659803-1678994:-1:exon
subclass of: SO_0000010

105053519
type: Gene
SIO_000068: ncbigene

position:1659803:-1
position: 1659803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1678994:-1
position: 1678994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1659803-1678994:-1:exon

LOC105053519
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053519
product: uncharacterized LOC105053519, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_010934716.3
SIO_010081: LOC105053519
subclass of: SO_0000673
so part of: LOC105053519
location: complement(join(1659803..1660002,1665700..1665820,1678767..1678990))
location: region:1659803-1678990:-1
so has part: feature:1678767-1678990:-1:exon
so has part: feature:1665700-1665820:-1:exon
so has part: feature:1659803-1660002:-1:exon

position:1678990:-1
position: 1678990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678767-1678990:-1:exon

position:1678767:-1
position: 1678767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1665700-1665820:-1:exon

position:1665700:-1
position: 1665700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1665820:-1
position: 1665820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1659803-1660002:-1:exon

position:1660002:-1
position: 1660002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053519
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053519 isoform X2
translation: MSNLARAAWNQAWRLATTIAGAPKNGSFRDPLVSKHGFPFINYKRFSTLESQANEGLIPPELLTSRTVLMPDRVIGSNVYSILQHDTLMMT
SIO_010081: LOC105053519
subclass of: SO_0000673
so part of: LOC105053519
location: complement(join(1659953..1660002,1665700..1665820,1678767..1678871))
location: region:1659953-1678871:-1
so has part: feature:1678767-1678871:-1:exon
so has part: feature:1665700-1665820:-1:exon
so has part: feature:1659953-1660002:-1:exon

XP_010933018.1
type: Protein
SIO_000068: ncbiprotein

position:1659953:-1
position: 1659953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1678871:-1
position: 1678871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678767-1678871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1665700-1665820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1659953-1660002:-1:exon

LOC105053519
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105053519
product: uncharacterized LOC105053519, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002165706.2
SIO_010081: LOC105053519
so part of: LOC105053519
location: complement(join(1663384..1663742,1663820..1664095,1664240..1664300,1665700..1665820,1678767..1678994))
location: region:1663384-1678994:-1
so has part: feature:1678767-1678994:-1:exon
so has part: feature:1665700-1665820:-1:exon
so has part: feature:1664240-1664300:-1:exon
so has part: feature:1663820-1664095:-1:exon
so has part: feature:1663384-1663742:-1:exon

position:1663384:-1
position: 1663384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678767-1678994:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1665700-1665820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1664240-1664300:-1:exon

position:1664240:-1
position: 1664240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664300:-1
position: 1664300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1663820-1664095:-1:exon

position:1663820:-1
position: 1663820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664095:-1
position: 1664095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1663384-1663742:-1:exon

position:1663742:-1
position: 1663742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053519
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105053519
product: uncharacterized LOC105053519, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003802093.1
SIO_010081: LOC105053519
so part of: LOC105053519
location: complement(join(1663384..1663742,1663820..1664095,1665700..1665820,1678767..1678993))
location: region:1663384-1678993:-1
so has part: feature:1678767-1678993:-1:exon
so has part: feature:1665700-1665820:-1:exon
so has part: feature:1663820-1664095:-1:exon
so has part: feature:1663384-1663742:-1:exon

position:1678993:-1
position: 1678993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678767-1678993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1665700-1665820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1663820-1664095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1663384-1663742:-1:exon

LOC105053519
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053519
product: uncharacterized LOC105053519, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_010934718.3
SIO_010081: LOC105053519
subclass of: SO_0000673
so part of: LOC105053519
location: complement(join(1663384..1663742,1665700..1665820,1678776..1678992))
location: region:1663384-1678992:-1
so has part: feature:1678776-1678992:-1:exon
so has part: feature:1665700-1665820:-1:exon
so has part: feature:1663384-1663742:-1:exon

position:1678992:-1
position: 1678992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678776-1678992:-1:exon

position:1678776:-1
position: 1678776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1665700-1665820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1663384-1663742:-1:exon

LOC105053519
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053519
product: uncharacterized LOC105053519, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_010934717.3
SIO_010081: LOC105053519
subclass of: SO_0000673
so part of: LOC105053519
location: complement(join(1663384..1663742,1665700..1665820,1678767..1678988))
location: region:1663384-1678988:-1
so has part: feature:1678767-1678988:-1:exon
so has part: feature:1665700-1665820:-1:exon
so has part: feature:1663384-1663742:-1:exon

position:1678988:-1
position: 1678988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678767-1678988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1665700-1665820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1663384-1663742:-1:exon

LOC105053519
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053519 isoform X4
translation: MSNLARAAWNQAWRLATTIAGAPKNGSFRDPLHGFPFINYKRFSTLESQANEGLIPPELLTSRTVLMPDRVIDKWGLWLLSLA
SIO_010081: LOC105053519
subclass of: SO_0000673
so part of: LOC105053519
location: complement(join(1663708..1663742,1665700..1665820,1678776..1678871))
location: region:1663708-1678871:-1
so has part: feature:1678776-1678871:-1:exon
so has part: feature:1665700-1665820:-1:exon
so has part: feature:1663708-1663742:-1:exon

XP_010933020.1
type: Protein
SIO_000068: ncbiprotein

position:1663708:-1
position: 1663708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678776-1678871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1665700-1665820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1663708-1663742:-1:exon

LOC105053519
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053519 isoform X3
translation: MSNLARAAWNQAWRLATTIAGAPKNGSFRDPLVSKHGFPFINYKRFSTLESQANEGLIPPELLTSRTVLMPDRVIDKWGLWLLSLA
SIO_010081: LOC105053519
subclass of: SO_0000673
so part of: LOC105053519
location: complement(join(1663708..1663742,1665700..1665820,1678767..1678871))
location: region:1663708-1678871:-1
so has part: feature:1678767-1678871:-1:exon
so has part: feature:1665700-1665820:-1:exon
so has part: feature:1663708-1663742:-1:exon

XP_010933019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1678767-1678871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1665700-1665820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1663708-1663742:-1:exon

LOC105053519
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053519
product: uncharacterized LOC105053519, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_029267150.1
SIO_010081: LOC105053519
subclass of: SO_0000673
so part of: LOC105053519
location: complement(join(1664106..1664300,1665700..1665820,1678767..1678990))
location: region:1664106-1678990:-1
so has part: feature:1678767-1678990:-1:exon
so has part: feature:1665700-1665820:-1:exon
so has part: feature:1664106-1664300:-1:exon

position:1664106:-1
position: 1664106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678767-1678990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1665700-1665820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1664106-1664300:-1:exon

LOC105053519
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053519 isoform X5
translation: MSNLARAAWNQAWRLATTIAGAPKNGSFRDPLVSKHGFPFINYKRFSTLESQANEGLIPPELLTSRTVLMPDRVIGL
SIO_010081: LOC105053519
subclass of: SO_0000673
so part of: LOC105053519
location: complement(join(1664293..1664300,1665700..1665820,1678767..1678871))
location: region:1664293-1678871:-1
so has part: feature:1678767-1678871:-1:exon
so has part: feature:1665700-1665820:-1:exon
so has part: feature:1664293-1664300:-1:exon

XP_029122983.1
type: Protein
SIO_000068: ncbiprotein

position:1664293:-1
position: 1664293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678767-1678871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1665700-1665820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1664293-1664300:-1:exon

LOC105053519
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053519
product: uncharacterized LOC105053519, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_010934714.3
SIO_010081: LOC105053519
subclass of: SO_0000673
so part of: LOC105053519
location: complement(join(1664316..1665594,1665700..1665820,1678767..1678991))
location: region:1664316-1678991:-1
so has part: feature:1678767-1678991:-1:exon
so has part: feature:1665700-1665820:-1:exon
so has part: feature:1664316-1665594:-1:exon

position:1664316:-1
position: 1664316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1678991:-1
position: 1678991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678767-1678991:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1665700-1665820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1664316-1665594:-1:exon

position:1665594:-1
position: 1665594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053519
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053519 isoform X1
translation: MSNLARAAWNQAWRLATTIAGAPKNGSFRDPLVSKHGFPFINYKRFSTLESQANEGLIPPELLTSRTVLMPDRVIVIVSNINAILVQTSPLSQQYLMHMIVCLI
SIO_010081: LOC105053519
subclass of: SO_0000673
so part of: LOC105053519
location: complement(join(1665506..1665594,1665700..1665820,1678767..1678871))
location: region:1665506-1678871:-1
so has part: feature:1678767-1678871:-1:exon
so has part: feature:1665700-1665820:-1:exon
so has part: feature:1665506-1665594:-1:exon

XP_010933016.1
type: Protein
SIO_000068: ncbiprotein

position:1665506:-1
position: 1665506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678767-1678871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1665700-1665820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1665506-1665594:-1:exon

LOC105053520
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1692915..1699982
location: region:1692915-1699982:1
so has part: feature:1692915-1699982:1:exon
subclass of: SO_0000010

105053520
type: Gene
SIO_000068: ncbigene

position:1692915:1
position: 1692915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1699982:1
position: 1699982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1692915-1699982:1:exon

LOC105053520
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053520
product: rop guanine nucleotide exchange factor 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_010934721.3
SIO_010081: LOC105053520
subclass of: SO_0000673
so part of: LOC105053520
location: join(1692915..1693257,1693874..1693987,1696741..1697157,1697842..1697996,1698091..1698165,1698333..1698608,1698766..1699113,1699429..1699982)
location: region:1692915-1699982:1
so has part: feature:1692915-1693257:1:exon
so has part: feature:1693874-1693987:1:exon
so has part: feature:1696741-1697157:1:exon
so has part: feature:1697842-1697996:1:exon
so has part: feature:1698091-1698165:1:exon
so has part: feature:1698333-1698608:1:exon
so has part: feature:1698766-1699113:1:exon
so has part: feature:1699429-1699982:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1692915-1693257:1:exon

position:1693257:1
position: 1693257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1693874-1693987:1:exon

position:1693874:1
position: 1693874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1693987:1
position: 1693987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1696741-1697157:1:exon

position:1696741:1
position: 1696741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1697157:1
position: 1697157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1697842-1697996:1:exon

position:1697842:1
position: 1697842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1697996:1
position: 1697996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1698091-1698165:1:exon

position:1698091:1
position: 1698091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698165:1
position: 1698165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1698333-1698608:1:exon

position:1698333:1
position: 1698333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698608:1
position: 1698608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1698766-1699113:1:exon

position:1698766:1
position: 1698766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1699113:1
position: 1699113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1699429-1699982:1:exon

position:1699429:1
position: 1699429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rop guanine nucleotide exchange factor 14
translation: MRRLVCCRRRSKDFSLDFDEEDRVMTYRGLESCILNSCSYDNESGSSGMIGADGCAITDSLDDDASSCSSSKDALGSSFSSHCLMSSKQEEEQALDEWDTFHCLHHFGVKGKKPVTYSMNVSDVVAMKERFAKLLLGEDMSGGAQGISTALALSNAITNLSASVFGELWKLEPLSEERKSRWRREMDWLLSPTNYMVELVPATQNGANGRMLEIMTPKARSDVYMNLPALQKLDSMLIDVLDSMVETEFWYAEDGSRAEGQSQSGGIRPSKKWWLPFPRVPDSGLSPSQRKRLGFHGKFVHQVLKAAKSINEEVLHQMPIPDAIKDALPKSGIASLGEDIYQAIAVESISVEEILLSLNLKNEHRVLETVNRLEGAVFAWNQRMSEETSKRSPMRYPWYFMRGKGSELEKVAVCLKRAEALLQLLKIRFPNLPHSFIDVTKVQSNKDVGRSIIEAYSRVLVGLAFSILLRIGDILQEDDLKKPTTPIATLKFDFCSDVYLAGITETPPGHINRCLIDQMNMVDGRYSKDDASKAVMEPFLGNKGNTIMVVTAMSI
SIO_010081: LOC105053520
subclass of: SO_0000673
so part of: LOC105053520
location: join(1693921..1693987,1696741..1697157,1697842..1697996,1698091..1698165,1698333..1698608,1698766..1699113,1699429..1699758)
location: region:1693921-1699758:1
so has part: feature:1693921-1693987:1:exon
so has part: feature:1696741-1697157:1:exon
so has part: feature:1697842-1697996:1:exon
so has part: feature:1698091-1698165:1:exon
so has part: feature:1698333-1698608:1:exon
so has part: feature:1698766-1699113:1:exon
so has part: feature:1699429-1699758:1:exon

XP_010933023.1
type: Protein
SIO_000068: ncbiprotein

position:1693921:1
position: 1693921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1699758:1
position: 1699758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1693921-1693987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1696741-1697157:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1697842-1697996:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1698091-1698165:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1698333-1698608:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1698766-1699113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1699429-1699758:1:exon

LOC105053521
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1888870..1925977
location: region:1888870-1925977:1
so has part: feature:1888870-1925977:1:exon
subclass of: SO_0000010

105053521
type: Gene
SIO_000068: ncbigene

position:1888870:1
position: 1888870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1925977:1
position: 1925977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1888870-1925977:1:exon

LOC105053521
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053521
product: dual specificity protein kinase YAK1 homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_010934724.3
SIO_010081: LOC105053521
subclass of: SO_0000673
so part of: LOC105053521
location: join(1888870..1889480,1893413..1893612,1908604..1908757,1908849..1908958,1909081..1909150,1909248..1909330,1909426..1909504,1909638..1909678,1910027..1910149,1913752..1913902,1913995..1914106,1914223..1914305,1914409..1914483,1914831..1914905,1915082..1915905,1916656..1916820,1922325..1922596,1925085..1925977)
location: region:1888870-1925977:1
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urn:…
SIO_000300: 1
SIO_000628: feature:1888870-1889480:1:exon

position:1889480:1
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
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position:1925085:1
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reference: sequence
type: ForwardStrandPosition
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LOC105053521
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053521
product: dual specificity protein kinase YAK1 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_010934723.3
SIO_010081: LOC105053521
subclass of: SO_0000673
so part of: LOC105053521
location: join(1888870..1889480,1893413..1893612,1908604..1908757,1908849..1908958,1909081..1909150,1909248..1909330,1909426..1909504,1909638..1909678,1910027..1910149,1913752..1913902,1913995..1914106,1914223..1914305,1914409..1914483,1914831..1914905,1915082..1915905,1916656..1916820,1922325..1922596,1925103..1925977)
location: region:1888870-1925977:1
so has part: feature:1888870-1889480:1:exon
so has part: feature:1893413-1893612:1:exon
so has part: feature:1908604-1908757:1:exon
so has part: feature:1908849-1908958:1:exon
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so has part: feature:1909638-1909678:1:exon
so has part: feature:1910027-1910149:1:exon
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so has part: feature:1915082-1915905:1:exon
so has part: feature:1916656-1916820:1:exon
so has part: feature:1922325-1922596:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:1888870-1889480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1893413-1893612:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1908604-1908757:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1908849-1908958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1909081-1909150:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1909248-1909330:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1909426-1909504:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1909638-1909678:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1910027-1910149:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1913752-1913902:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1913995-1914106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1914223-1914305:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1914409-1914483:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1914831-1914905:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1915082-1915905:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1916656-1916820:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1922325-1922596:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1925103-1925977:1:exon

position:1925103:1
position: 1925103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053521
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105053521
product: dual specificity protein kinase YAK1 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XR_833467.3
SIO_010081: LOC105053521
so part of: LOC105053521
location: join(1888870..1889480,1893413..1893612,1908604..1908757,1908849..1908958,1909081..1909150,1909248..1909330,1909426..1909504,1909638..1909678,1910027..1910149,1913752..1913902,1913995..1914106,1914223..1914305,1914409..1914483,1914831..1914905,1915082..1915905,1916656..1916820,1922325..1922596,1925103..1925556,1925712..1925977)
location: region:1888870-1925977:1
so has part: feature:1888870-1889480:1:exon
so has part: feature:1893413-1893612:1:exon
so has part: feature:1908604-1908757:1:exon
so has part: feature:1908849-1908958:1:exon
so has part: feature:1909081-1909150:1:exon
so has part: feature:1909248-1909330:1:exon
so has part: feature:1909426-1909504:1:exon
so has part: feature:1909638-1909678:1:exon
so has part: feature:1910027-1910149:1:exon
so has part: feature:1913752-1913902:1:exon
so has part: feature:1913995-1914106:1:exon
so has part: feature:1914223-1914305:1:exon
so has part: feature:1914409-1914483:1:exon
so has part: feature:1914831-1914905:1:exon
so has part: feature:1915082-1915905:1:exon
so has part: feature:1916656-1916820:1:exon
so has part: feature:1922325-1922596:1:exon
so has part: feature:1925103-1925556:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:1888870-1889480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1893413-1893612:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1908604-1908757:1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:1909081-1909150:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1909248-1909330:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1909426-1909504:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1909638-1909678:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1910027-1910149:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1913752-1913902:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1913995-1914106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1914223-1914305:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1914409-1914483:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1914831-1914905:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1915082-1915905:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1916656-1916820:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1922325-1922596:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1925103-1925556:1:exon

position:1925556:1
position: 1925556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1925712-1925977:1:exon

position:1925712:1
position: 1925712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053521
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053521
product: dual specificity protein kinase YAK1 homolog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_010934725.3
SIO_010081: LOC105053521
subclass of: SO_0000673
so part of: LOC105053521
location: join(1888870..1889480,1893413..1893612,1908604..1908757,1908849..1908958,1909081..1909150,1909248..1909330,1909426..1909504,1909638..1909678,1910027..1910149,1913752..1913902,1913995..1914106,1914223..1914305,1914409..1914483,1914831..1914905,1915082..1915905,1916656..1916820,1922325..1922548,1925085..1925977)
location: region:1888870-1925977:1
so has part: feature:1888870-1889480:1:exon
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so has part: feature:1914831-1914905:1:exon
so has part: feature:1915082-1915905:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:1888870-1889480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1893413-1893612:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1908604-1908757:1:exon

urn:…
SIO_000300: 4
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SIO_000300: 5
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urn:…
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urn:…
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SIO_000628: feature:1909426-1909504:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1909638-1909678:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1910027-1910149:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1913752-1913902:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1913995-1914106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1914223-1914305:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1914409-1914483:1:exon

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SIO_000300: 14
SIO_000628: feature:1914831-1914905:1:exon

urn:…
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SIO_000628: feature:1915082-1915905:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1916656-1916820:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1922325-1922548:1:exon

position:1922548:1
position: 1922548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1925085-1925977:1:exon

LOC105053521
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105053521
product: dual specificity protein kinase YAK1 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XR_833468.3
SIO_010081: LOC105053521
so part of: LOC105053521
location: join(1888870..1889480,1893413..1893612,1908604..1908757,1908849..1908958,1909081..1909150,1909248..1909330,1909426..1909504,1909638..1909678,1910027..1910149,1913752..1913902,1913995..1914106,1914223..1914305,1914409..1914483,1914831..1914905,1915082..1915905,1916656..1916820,1922325..1922548,1925103..1925556,1925712..1925977)
location: region:1888870-1925977:1
so has part: feature:1888870-1889480:1:exon
so has part: feature:1893413-1893612:1:exon
so has part: feature:1908604-1908757:1:exon
so has part: feature:1908849-1908958:1:exon
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so has part: feature:1913752-1913902:1:exon
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so has part: feature:1915082-1915905:1:exon
so has part: feature:1916656-1916820:1:exon
so has part: feature:1922325-1922548:1:exon
so has part: feature:1925103-1925556:1:exon
so has part: feature:1925712-1925977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1888870-1889480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1893413-1893612:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1908604-1908757:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1908849-1908958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1909081-1909150:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1909248-1909330:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1909426-1909504:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1909638-1909678:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1910027-1910149:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1913752-1913902:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1913995-1914106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1914223-1914305:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1914409-1914483:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1914831-1914905:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1915082-1915905:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1916656-1916820:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1922325-1922548:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1925103-1925556:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1925712-1925977:1:exon

LOC105053521
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein kinase YAK1 homolog isoform X1
translation: MEEGESSKEDGSRTGESDGAASADSGNSSSWMPSGEAFRPYVSSPQSSTGVSVKPGTVRIIVRRPLVARVTKDILETFQICNPNFKYSEALNPKRFLTNPSVGVKNDGHDNADSNLILYVNFVLVNMVSKQRYIVKDLLGQGTFGQVAKCWVSENNSYVAVKIIKNDPAYYRQASVEISLLHVLNRKFDPDDEHHIVRILDYFVCQRHLCITFEILGPNLFELIKMNNYKGLSLNIVQMFSRQILNALMVMKDAGIIHCDLKPENILISTSVKPPEIKIIDFGSACMEGQTIYSYIQSRYYRSPEVLLGYPYTTAIDMWSFGCIVAELFLGLPLFPADSEFDLLKRMIETLGGQPPDDQLRDAKNTSKFFKHVGSIYRLEDDKACKGVTSAYRVLTVEEFEARELKRPEMGKHYFNCAKLEEIIANYPYRKNSHEEIKKENLTRLALVDFLRGLVEFDPGKRWSPLQASHHPFLTGEPFTCPYEPQPETPRIPVIHTVSVDHNPGGGHWLAAGLSPQVANSNICLPQNSPHFQSVPISYCSSYGSVGSHGSYNDNAALGSSYGSYADVNNMHAYYSPVGPCGVNIHAQIGGSFLGASPDARRRPQLSHGNGFGLSPVCLEPMSLGASPTQFTPPGSQMQISTASPGKYGPTSPARSVHIPSRGKAAAVGHYNRRRNWGCSTMCVQPYESASQHGLGHHGDRISCSHPDAYSRGHGGSSRSALSASNHSNWRQQRGVGTGLASGFSSTNHQPSAASHAHNSNTVSLHSSEVFFDKPECNSSVPDPADWDPNYSDESLLQEDNSDSLAFEFNGIRLGNTMDTMNATSGVGRFDHSRKLGHMNFISTNYRTDGLFQAYSVGESSHISTRDMNLGYGRLPHFSQNIPSRFGQQSAHQFSHVNSSFMHGERNHQNGQPTRSNYSVAGSYSSMNALFTNGMPWGRRAGHSTATTVPSSHARKDYGRIS
SIO_010081: LOC105053521
subclass of: SO_0000673
so part of: LOC105053521
location: join(1889286..1889480,1893413..1893612,1908604..1908757,1908849..1908958,1909081..1909150,1909248..1909330,1909426..1909504,1909638..1909678,1910027..1910149,1913752..1913902,1913995..1914106,1914223..1914305,1914409..1914483,1914831..1914905,1915082..1915905,1916656..1916820,1922325..1922596,1925103..1925179)
location: region:1889286-1925179:1
so has part: feature:1889286-1889480:1:exon
so has part: feature:1893413-1893612:1:exon
so has part: feature:1908604-1908757:1:exon
so has part: feature:1908849-1908958:1:exon
so has part: feature:1909081-1909150:1:exon
so has part: feature:1909248-1909330:1:exon
so has part: feature:1909426-1909504:1:exon
so has part: feature:1909638-1909678:1:exon
so has part: feature:1910027-1910149:1:exon
so has part: feature:1913752-1913902:1:exon
so has part: feature:1913995-1914106:1:exon
so has part: feature:1914223-1914305:1:exon
so has part: feature:1914409-1914483:1:exon
so has part: feature:1914831-1914905:1:exon
so has part: feature:1915082-1915905:1:exon
so has part: feature:1916656-1916820:1:exon
so has part: feature:1922325-1922596:1:exon
so has part: feature:1925103-1925179:1:exon

XP_010933025.1
type: Protein
SIO_000068: ncbiprotein

position:1889286:1
position: 1889286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1925179:1
position: 1925179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1889286-1889480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1893413-1893612:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1908604-1908757:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1908849-1908958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1909081-1909150:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1909248-1909330:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1909426-1909504:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1909638-1909678:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1910027-1910149:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1913752-1913902:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1913995-1914106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1914223-1914305:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1914409-1914483:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1914831-1914905:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1915082-1915905:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1916656-1916820:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1922325-1922596:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1925103-1925179:1:exon

LOC105053521
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein kinase YAK1 homolog isoform X2
translation: MEEGESSKEDGSRTGESDGAASADSGNSSSWMPSGEAFRPYVSSPQSSTGVSVKPGTVRIIVRRPLVARVTKDILETFQICNPNFKYSEALNPKRFLTNPSVGVKNDGHDNADSNLILYVNFVLVNMVSKQRYIVKDLLGQGTFGQVAKCWVSENNSYVAVKIIKNDPAYYRQASVEISLLHVLNRKFDPDDEHHIVRILDYFVCQRHLCITFEILGPNLFELIKMNNYKGLSLNIVQMFSRQILNALMVMKDAGIIHCDLKPENILISTSVKPPEIKIIDFGSACMEGQTIYSYIQSRYYRSPEVLLGYPYTTAIDMWSFGCIVAELFLGLPLFPADSEFDLLKRMIETLGGQPPDDQLRDAKNTSKFFKHVGSIYRLEDDKACKGVTSAYRVLTVEEFEARELKRPEMGKHYFNCAKLEEIIANYPYRKNSHEEIKKENLTRLALVDFLRGLVEFDPGKRWSPLQASHHPFLTGEPFTCPYEPQPETPRIPVIHTVSVDHNPGGGHWLAAGLSPQVANSNICLPQNSPHFQSVPISYCSSYGSVGSHGSYNDNAALGSSYGSYADVNNMHAYYSPVGPCGVNIHAQIGGSFLGASPDARRRPQLSHGNGFGLSPVCLEPMSLGASPTQFTPPGSQMQISTASPGKYGPTSPARSVHIPSRGKAAAVGHYNRRRNWGCSTMCVQPYESASQHGLGHHGDRISCSHPDAYSRGHGGSSRSALSASNHSNWRQQRGVGTGLASGFSSTNHQPSAASHAHNSNTVSLHSSEVFFDKPECNSSVPDPADWDPNYSDESLLQEDNSDSLAFEFNGIRLGNTMDTMNATSGVGRFDHSRKLGHMNFISTNYRTDGLFQAYSVGESSHISTRDMNLGYGRLPHFSQNIPSRFGQQSAHQFSHVNSSFMHGERNHQNGQPTRSNYSVAGSYSSMNALFTNGMPWG
SIO_010081: LOC105053521
subclass of: SO_0000673
so part of: LOC105053521
location: join(1889286..1889480,1893413..1893612,1908604..1908757,1908849..1908958,1909081..1909150,1909248..1909330,1909426..1909504,1909638..1909678,1910027..1910149,1913752..1913902,1913995..1914106,1914223..1914305,1914409..1914483,1914831..1914905,1915082..1915905,1916656..1916820,1922325..1922596,1925085..1925089)
location: region:1889286-1925089:1
so has part: feature:1889286-1889480:1:exon
so has part: feature:1893413-1893612:1:exon
so has part: feature:1908604-1908757:1:exon
so has part: feature:1908849-1908958:1:exon
so has part: feature:1909081-1909150:1:exon
so has part: feature:1909248-1909330:1:exon
so has part: feature:1909426-1909504:1:exon
so has part: feature:1909638-1909678:1:exon
so has part: feature:1910027-1910149:1:exon
so has part: feature:1913752-1913902:1:exon
so has part: feature:1913995-1914106:1:exon
so has part: feature:1914223-1914305:1:exon
so has part: feature:1914409-1914483:1:exon
so has part: feature:1914831-1914905:1:exon
so has part: feature:1915082-1915905:1:exon
so has part: feature:1916656-1916820:1:exon
so has part: feature:1922325-1922596:1:exon
so has part: feature:1925085-1925089:1:exon

XP_010933026.1
type: Protein
SIO_000068: ncbiprotein

position:1925089:1
position: 1925089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1889286-1889480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1893413-1893612:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1908604-1908757:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1908849-1908958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1909081-1909150:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1909248-1909330:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1909426-1909504:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1909638-1909678:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1910027-1910149:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1913752-1913902:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1913995-1914106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1914223-1914305:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1914409-1914483:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1914831-1914905:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1915082-1915905:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1916656-1916820:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1922325-1922596:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1925085-1925089:1:exon

LOC105053521
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein kinase YAK1 homolog isoform X3
translation: MEEGESSKEDGSRTGESDGAASADSGNSSSWMPSGEAFRPYVSSPQSSTGVSVKPGTVRIIVRRPLVARVTKDILETFQICNPNFKYSEALNPKRFLTNPSVGVKNDGHDNADSNLILYVNFVLVNMVSKQRYIVKDLLGQGTFGQVAKCWVSENNSYVAVKIIKNDPAYYRQASVEISLLHVLNRKFDPDDEHHIVRILDYFVCQRHLCITFEILGPNLFELIKMNNYKGLSLNIVQMFSRQILNALMVMKDAGIIHCDLKPENILISTSVKPPEIKIIDFGSACMEGQTIYSYIQSRYYRSPEVLLGYPYTTAIDMWSFGCIVAELFLGLPLFPADSEFDLLKRMIETLGGQPPDDQLRDAKNTSKFFKHVGSIYRLEDDKACKGVTSAYRVLTVEEFEARELKRPEMGKHYFNCAKLEEIIANYPYRKNSHEEIKKENLTRLALVDFLRGLVEFDPGKRWSPLQASHHPFLTGEPFTCPYEPQPETPRIPVIHTVSVDHNPGGGHWLAAGLSPQVANSNICLPQNSPHFQSVPISYCSSYGSVGSHGSYNDNAALGSSYGSYADVNNMHAYYSPVGPCGVNIHAQIGGSFLGASPDARRRPQLSHGNGFGLSPVCLEPMSLGASPTQFTPPGSQMQISTASPGKYGPTSPARSVHIPSRGKAAAVGHYNRRRNWGCSTMCVQPYESASQHGLGHHGDRISCSHPDAYSRGHGGSSRSALSASNHSNWRQQRGVGTGLASGFSSTNHQPSAASHAHNSNTVSLHSSEVFFDKPECNSSVPDPADWDPNYSDESLLQEDNSDSLAFEFNGIRLGNTMDTMNATSGVGRFDHSRKLGHMNFISTNYRTDGLFQAYSVGESSHISTRDMNLGYGRLPHFSQNIPSRFGQQSAHQFSHVNSSFMHGERNHQNGQPTRSNYSVAG
SIO_010081: LOC105053521
subclass of: SO_0000673
so part of: LOC105053521
location: join(1889286..1889480,1893413..1893612,1908604..1908757,1908849..1908958,1909081..1909150,1909248..1909330,1909426..1909504,1909638..1909678,1910027..1910149,1913752..1913902,1913995..1914106,1914223..1914305,1914409..1914483,1914831..1914905,1915082..1915905,1916656..1916820,1922325..1922548,1925085..1925089)
location: region:1889286-1925089:1
so has part: feature:1889286-1889480:1:exon
so has part: feature:1893413-1893612:1:exon
so has part: feature:1908604-1908757:1:exon
so has part: feature:1908849-1908958:1:exon
so has part: feature:1909081-1909150:1:exon
so has part: feature:1909248-1909330:1:exon
so has part: feature:1909426-1909504:1:exon
so has part: feature:1909638-1909678:1:exon
so has part: feature:1910027-1910149:1:exon
so has part: feature:1913752-1913902:1:exon
so has part: feature:1913995-1914106:1:exon
so has part: feature:1914223-1914305:1:exon
so has part: feature:1914409-1914483:1:exon
so has part: feature:1914831-1914905:1:exon
so has part: feature:1915082-1915905:1:exon
so has part: feature:1916656-1916820:1:exon
so has part: feature:1922325-1922548:1:exon
so has part: feature:1925085-1925089:1:exon

XP_010933027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1889286-1889480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1893413-1893612:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1908604-1908757:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1908849-1908958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1909081-1909150:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1909248-1909330:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1909426-1909504:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1909638-1909678:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1910027-1910149:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1913752-1913902:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1913995-1914106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1914223-1914305:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1914409-1914483:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1914831-1914905:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1915082-1915905:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1916656-1916820:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1922325-1922548:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1925085-1925089:1:exon

LOC105053522
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053522
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1981372..2001463
location: region:1981372-2001463:1
so has part: feature:1981372-2001463:1:exon
subclass of: SO_0000010

105053522
type: Gene
SIO_000068: ncbigene

position:1981372:1
position: 1981372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2001463:1
position: 2001463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981372-2001463:1:exon

LOC105053522
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105053522
product: alkylated DNA repair protein ALKBH8 homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_833469.3
SIO_010081: LOC105053522
so part of: LOC105053522
location: join(1981372..1981482,1984905..1985247,1989686..1989787,1989903..1989989,1991578..1991703,1993759..1994025,1994309..1994374,1997469..1997590,2000817..2001463)
location: region:1981372-2001463:1
so has part: feature:1981372-1981482:1:exon
so has part: feature:1984905-1985247:1:exon
so has part: feature:1989686-1989787:1:exon
so has part: feature:1989903-1989989:1:exon
so has part: feature:1991578-1991703:1:exon
so has part: feature:1993759-1994025:1:exon
so has part: feature:1994309-1994374:1:exon
so has part: feature:1997469-1997590:1:exon
so has part: feature:2000817-2001463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1981372-1981482:1:exon

position:1981482:1
position: 1981482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1984905-1985247:1:exon

position:1984905:1
position: 1984905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1985247:1
position: 1985247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1989686-1989787:1:exon

position:1989686:1
position: 1989686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1989787:1
position: 1989787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1989903-1989989:1:exon

position:1989903:1
position: 1989903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1989989:1
position: 1989989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1991578-1991703:1:exon

position:1991578:1
position: 1991578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1991703:1
position: 1991703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1993759-1994025:1:exon

position:1993759:1
position: 1993759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1994025:1
position: 1994025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1994309-1994374:1:exon

position:1994309:1
position: 1994309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1994374:1
position: 1994374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1997469-1997590:1:exon

position:1997469:1
position: 1997469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1997590:1
position: 1997590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2000817-2001463:1:exon

position:2000817:1
position: 2000817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053522
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053522
product: alkylated DNA repair protein ALKBH8 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_010934726.3
SIO_010081: LOC105053522
subclass of: SO_0000673
so part of: LOC105053522
location: join(1981372..1981482,1984905..1985247,1989686..1989787,1989903..1989989,1991578..1991703,1993759..1994025,1994309..1994374,2000817..2001463)
location: region:1981372-2001463:1
so has part: feature:1981372-1981482:1:exon
so has part: feature:1984905-1985247:1:exon
so has part: feature:1989686-1989787:1:exon
so has part: feature:1989903-1989989:1:exon
so has part: feature:1991578-1991703:1:exon
so has part: feature:1993759-1994025:1:exon
so has part: feature:1994309-1994374:1:exon
so has part: feature:2000817-2001463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1981372-1981482:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1984905-1985247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1989686-1989787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1989903-1989989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1991578-1991703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1993759-1994025:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1994309-1994374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2000817-2001463:1:exon

LOC105053522
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053522
product: alkylated DNA repair protein ALKBH8 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_010934728.3
SIO_010081: LOC105053522
subclass of: SO_0000673
so part of: LOC105053522
location: join(1981372..1981482,1984905..1985139,1989686..1989787,1989903..1989989,1991578..1991703,1993759..1994025,1994309..1994374,2000817..2001463)
location: region:1981372-2001463:1
so has part: feature:1981372-1981482:1:exon
so has part: feature:1984905-1985139:1:exon
so has part: feature:1989686-1989787:1:exon
so has part: feature:1989903-1989989:1:exon
so has part: feature:1991578-1991703:1:exon
so has part: feature:1993759-1994025:1:exon
so has part: feature:1994309-1994374:1:exon
so has part: feature:2000817-2001463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1981372-1981482:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1984905-1985139:1:exon

position:1985139:1
position: 1985139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1989686-1989787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1989903-1989989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1991578-1991703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1993759-1994025:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1994309-1994374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2000817-2001463:1:exon

LOC105053522
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053522
product: alkylated DNA repair protein ALKBH8 homolog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_010934729.3
SIO_010081: LOC105053522
subclass of: SO_0000673
so part of: LOC105053522
location: join(1981372..1981482,1984905..1985247,1989686..1989787,1989903..1989989,1991578..1991703,1993759..1994025,1994309..1994374,1996279..1996584)
location: region:1981372-1996584:1
so has part: feature:1981372-1981482:1:exon
so has part: feature:1984905-1985247:1:exon
so has part: feature:1989686-1989787:1:exon
so has part: feature:1989903-1989989:1:exon
so has part: feature:1991578-1991703:1:exon
so has part: feature:1993759-1994025:1:exon
so has part: feature:1994309-1994374:1:exon
so has part: feature:1996279-1996584:1:exon

position:1996584:1
position: 1996584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981372-1981482:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1984905-1985247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1989686-1989787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1989903-1989989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1991578-1991703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1993759-1994025:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1994309-1994374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1996279-1996584:1:exon

position:1996279:1
position: 1996279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053522
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053522
product: alkylated DNA repair protein ALKBH8 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019853721.1
SIO_010081: LOC105053522
subclass of: SO_0000673
so part of: LOC105053522
location: join(1981378..1981482,1981936..1982050,1984905..1985247,1989686..1989787,1989903..1989989,1991578..1991703,1993759..1994025,1994309..1994374,2000817..2001463)
location: region:1981378-2001463:1
so has part: feature:1981378-1981482:1:exon
so has part: feature:1981936-1982050:1:exon
so has part: feature:1984905-1985247:1:exon
so has part: feature:1989686-1989787:1:exon
so has part: feature:1989903-1989989:1:exon
so has part: feature:1991578-1991703:1:exon
so has part: feature:1993759-1994025:1:exon
so has part: feature:1994309-1994374:1:exon
so has part: feature:2000817-2001463:1:exon

position:1981378:1
position: 1981378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981378-1981482:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1981936-1982050:1:exon

position:1981936:1
position: 1981936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1982050:1
position: 1982050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1984905-1985247:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1989686-1989787:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1989903-1989989:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1991578-1991703:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1993759-1994025:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1994309-1994374:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2000817-2001463:1:exon

LOC105053522
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053522
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alkylated DNA repair protein ALKBH8 homolog isoform X1
translation: MNKVQSKFTRPKGMDHESSSNLYVANCGPAVGISFDNIESVFSTFGKVIGVHAADETGTRVIVCFHEVSAAQAAFKALNGYSCPDLGGRTLCIRYSVPQPPPKILGGDSLPVCLSASELAIPGIYLVHEFITLKEEKELLAEVDARPWKRLSKRKVQHYGYEFLYETRNVDSKQFLGELPSFVSHILKKIMSFPGLDDDRSKQVDQLTVNEYPSGVGLSPHIDTHSAFDELIFSLSLAGPCIMEFRRYPQGTFTAIGNNPQQLSNFTRKAIFLPPRSMLLISGEGRYAWHHYIPHHKVDTVGGHVVRRSSRRVSFTFRKVRKGPCCCEYKQYCDSQKNAIRAMFATENTKQRRAGHIITCNT
SIO_010081: LOC105053522
subclass of: SO_0000673
so part of: LOC105053522
location: join(1984939..1985247,1989686..1989787,1989903..1989989,1991578..1991703,1993759..1994025,1994309..1994374,2000817..2000948)
location: region:1984939-2000948:1
so has part: feature:1984939-1985247:1:exon
so has part: feature:1989686-1989787:1:exon
so has part: feature:1989903-1989989:1:exon
so has part: feature:1991578-1991703:1:exon
so has part: feature:1993759-1994025:1:exon
so has part: feature:1994309-1994374:1:exon
so has part: feature:2000817-2000948:1:exon

XP_019709280.1
type: Protein
SIO_000068: ncbiprotein

position:1984939:1
position: 1984939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2000948:1
position: 2000948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1984939-1985247:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1989686-1989787:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1989903-1989989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1991578-1991703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1993759-1994025:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1994309-1994374:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2000817-2000948:1:exon

LOC105053522
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053522
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alkylated DNA repair protein ALKBH8 homolog isoform X1
translation: MNKVQSKFTRPKGMDHESSSNLYVANCGPAVGISFDNIESVFSTFGKVIGVHAADETGTRVIVCFHEVSAAQAAFKALNGYSCPDLGGRTLCIRYSVPQPPPKILGGDSLPVCLSASELAIPGIYLVHEFITLKEEKELLAEVDARPWKRLSKRKVQHYGYEFLYETRNVDSKQFLGELPSFVSHILKKIMSFPGLDDDRSKQVDQLTVNEYPSGVGLSPHIDTHSAFDELIFSLSLAGPCIMEFRRYPQGTFTAIGNNPQQLSNFTRKAIFLPPRSMLLISGEGRYAWHHYIPHHKVDTVGGHVVRRSSRRVSFTFRKVRKGPCCCEYKQYCDSQKNAIRAMFATENTKQRRAGHIITCNT
SIO_010081: LOC105053522
subclass of: SO_0000673
so part of: LOC105053522
location: join(1984939..1985247,1989686..1989787,1989903..1989989,1991578..1991703,1993759..1994025,1994309..1994374,2000817..2000948)
location: region:1984939-2000948:1
so has part: feature:1984939-1985247:1:exon
so has part: feature:1989686-1989787:1:exon
so has part: feature:1989903-1989989:1:exon
so has part: feature:1991578-1991703:1:exon
so has part: feature:1993759-1994025:1:exon
so has part: feature:1994309-1994374:1:exon
so has part: feature:2000817-2000948:1:exon

XP_010933028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1984939-1985247:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1989686-1989787:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1989903-1989989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1991578-1991703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1993759-1994025:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1994309-1994374:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2000817-2000948:1:exon

LOC105053522
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053522
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alkylated DNA repair protein ALKBH8 homolog isoform X2
translation: MNKVQSKFTRPKGMDHESSSNLYVANCGPAVGISFDNIESVFSTFGKVIGVHAADETGTRVIVCFHEILGGDSLPVCLSASELAIPGIYLVHEFITLKEEKELLAEVDARPWKRLSKRKVQHYGYEFLYETRNVDSKQFLGELPSFVSHILKKIMSFPGLDDDRSKQVDQLTVNEYPSGVGLSPHIDTHSAFDELIFSLSLAGPCIMEFRRYPQGTFTAIGNNPQQLSNFTRKAIFLPPRSMLLISGEGRYAWHHYIPHHKVDTVGGHVVRRSSRRVSFTFRKVRKGPCCCEYKQYCDSQKNAIRAMFATENTKQRRAGHIITCNT
SIO_010081: LOC105053522
subclass of: SO_0000673
so part of: LOC105053522
location: join(1984939..1985139,1989686..1989787,1989903..1989989,1991578..1991703,1993759..1994025,1994309..1994374,2000817..2000948)
location: region:1984939-2000948:1
so has part: feature:1984939-1985139:1:exon
so has part: feature:1989686-1989787:1:exon
so has part: feature:1989903-1989989:1:exon
so has part: feature:1991578-1991703:1:exon
so has part: feature:1993759-1994025:1:exon
so has part: feature:1994309-1994374:1:exon
so has part: feature:2000817-2000948:1:exon

XP_010933030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1984939-1985139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1989686-1989787:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1989903-1989989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1991578-1991703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1993759-1994025:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1994309-1994374:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2000817-2000948:1:exon

LOC105053522
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053522
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alkylated DNA repair protein ALKBH8 homolog isoform X3
translation: MNKVQSKFTRPKGMDHESSSNLYVANCGPAVGISFDNIESVFSTFGKVIGVHAADETGTRVIVCFHEVSAAQAAFKALNGYSCPDLGGRTLCIRYSVPQPPPKILGGDSLPVCLSASELAIPGIYLVHEFITLKEEKELLAEVDARPWKRLSKRKVQHYGYEFLYETRNVDSKQFLGELPSFVSHILKKIMSFPGLDDDRSKQVDQLTVNEYPSGVGLSPHIDTHSAFDELIFSLSLAGPCIMEFRRYPQGTFTAIGNNPQQLSNFTRKAIFLPPRSMLLISGEGRYAWHHYIPHHKVDTVGGHVVRRSSRRVSFTFRKSS
SIO_010081: LOC105053522
subclass of: SO_0000673
so part of: LOC105053522
location: join(1984939..1985247,1989686..1989787,1989903..1989989,1991578..1991703,1993759..1994025,1994309..1994374,1996279..1996287)
location: region:1984939-1996287:1
so has part: feature:1984939-1985247:1:exon
so has part: feature:1989686-1989787:1:exon
so has part: feature:1989903-1989989:1:exon
so has part: feature:1991578-1991703:1:exon
so has part: feature:1993759-1994025:1:exon
so has part: feature:1994309-1994374:1:exon
so has part: feature:1996279-1996287:1:exon

XP_010933031.1
type: Protein
SIO_000068: ncbiprotein

position:1996287:1
position: 1996287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1984939-1985247:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1989686-1989787:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1989903-1989989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1991578-1991703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1993759-1994025:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1994309-1994374:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1996279-1996287:1:exon

LOC105053552
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053552
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2020624..2037936)
location: region:2020624-2037936:-1
so has part: feature:2020624-2037936:-1:exon

105053552
type: Gene
SIO_000068: ncbigene

position:2020624:-1
position: 2020624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2037936:-1
position: 2037936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2020624-2037936:-1:exon

LOC105053552
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053552
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105053552
subclass of: SO_0000673
so part of: LOC105053552
location: complement(2020624..2020690)
location: region:2020624-2020690:-1
so has part: feature:2020624-2020690:-1:exon

position:2020690:-1
position: 2020690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2020624-2020690:-1:exon

LOC105053552
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053552
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105053552
subclass of: SO_0000673
so part of: LOC105053552
location: complement(2021594..2021707)
location: region:2021594-2021707:-1
so has part: feature:2021594-2021707:-1:exon

position:2021594:-1
position: 2021594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2021707:-1
position: 2021707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2021594-2021707:-1:exon

LOC105053552
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053552
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105053552
subclass of: SO_0000673
so part of: LOC105053552
location: complement(2035450..2035601)
location: region:2035450-2035601:-1
so has part: feature:2035450-2035601:-1:exon

position:2035450:-1
position: 2035450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2035601:-1
position: 2035601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2035450-2035601:-1:exon

LOC105053552
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053552
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105053552
subclass of: SO_0000673
so part of: LOC105053552
location: complement(2035701..2035895)
location: region:2035701-2035895:-1
so has part: feature:2035701-2035895:-1:exon

position:2035701:-1
position: 2035701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2035895:-1
position: 2035895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2035701-2035895:-1:exon

LOC105053552
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053552
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105053552
subclass of: SO_0000673
so part of: LOC105053552
location: complement(2035970..2036047)
location: region:2035970-2036047:-1
so has part: feature:2035970-2036047:-1:exon

position:2035970:-1
position: 2035970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2036047:-1
position: 2036047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2035970-2036047:-1:exon

LOC105053552
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053552
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105053552
subclass of: SO_0000673
so part of: LOC105053552
location: complement(2037883..2037936)
location: region:2037883-2037936:-1
so has part: feature:2037883-2037936:-1:exon

position:2037883:-1
position: 2037883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2037883-2037936:-1:exon

LOC105053523
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053523
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2071180..2072059
location: region:2071180-2072059:1
so has part: feature:2071180-2072059:1:exon
subclass of: SO_0000010

105053523
type: Gene
SIO_000068: ncbigene

position:2071180:1
position: 2071180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2072059:1
position: 2072059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2071180-2072059:1:exon

LOC105053523
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053523
product: DNA polymerase delta subunit 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_010934731.2
SIO_010081: LOC105053523
subclass of: SO_0000673
so part of: LOC105053523
location: join(2071180..2071497,2071602..2072059)
location: region:2071180-2072059:1
so has part: feature:2071180-2071497:1:exon
so has part: feature:2071602-2072059:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2071180-2071497:1:exon

position:2071497:1
position: 2071497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2071602-2072059:1:exon

position:2071602:1
position: 2071602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053523
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053523
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase delta subunit 4
translation: MASGDIQDFYRQRKKGAAASAATAKKKSGKPRRGGATVGADAAQTPFIVSHGSPDLQDDYGPEEEKLRQFDMDMRYGPCLGLTRLQRWERASAMGLHPPPEVGELLRQMWQDELRRRSSEPKTKPNPVLECLWEGRV
SIO_010081: LOC105053523
subclass of: SO_0000673
so part of: LOC105053523
location: join(2071326..2071497,2071602..2071843)
location: region:2071326-2071843:1
so has part: feature:2071326-2071497:1:exon
so has part: feature:2071602-2071843:1:exon

XP_010933033.1
type: Protein
SIO_000068: ncbiprotein

position:2071326:1
position: 2071326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2071843:1
position: 2071843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2071326-2071497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2071602-2071843:1:exon

LOC105053524
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053524
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2091377..2098267)
location: region:2091377-2098267:-1
so has part: feature:2091377-2098267:-1:exon
subclass of: SO_0000011

105053524
type: Gene
SIO_000068: ncbigene

position:2091377:-1
position: 2091377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2098267:-1
position: 2098267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2091377-2098267:-1:exon

LOC105053524
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51953
nc RNA class: lncRNA
gene: LOC105053524
product: uncharacterized LOC105053524
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XR_833470.3
SIO_010081: LOC105053524
subclass of: SO_0000673
so part of: LOC105053524
location: complement(join(2091377..2091563,2097763..2097840,2097958..2098267))
location: region:2091377-2098267:-1
so has part: feature:2097958-2098267:-1:exon
so has part: feature:2097763-2097840:-1:exon
so has part: feature:2091377-2091563:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2097958-2098267:-1:exon

position:2097958:-1
position: 2097958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2097763-2097840:-1:exon

position:2097763:-1
position: 2097763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2097840:-1
position: 2097840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2091377-2091563:-1:exon

position:2091563:-1
position: 2091563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053525
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053525
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2106850..2109508)
location: region:2106850-2109508:-1
so has part: feature:2106850-2109508:-1:exon
subclass of: SO_0000010

105053525
type: Gene
SIO_000068: ncbigene

position:2106850:-1
position: 2106850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2109508:-1
position: 2109508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2106850-2109508:-1:exon

LOC105053525
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053525
product: pectin acetylesterase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_010934732.2
SIO_010081: LOC105053525
subclass of: SO_0000673
so part of: LOC105053525
location: complement(join(2106850..2107323,2107775..2107857,2108034..2108152,2109316..2109508))
location: region:2106850-2109508:-1
so has part: feature:2109316-2109508:-1:exon
so has part: feature:2108034-2108152:-1:exon
so has part: feature:2107775-2107857:-1:exon
so has part: feature:2106850-2107323:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2109316-2109508:-1:exon

position:2109316:-1
position: 2109316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2108034-2108152:-1:exon

position:2108034:-1
position: 2108034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2108152:-1
position: 2108152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2107775-2107857:-1:exon

position:2107775:-1
position: 2107775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2107857:-1
position: 2107857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2106850-2107323:-1:exon

position:2107323:-1
position: 2107323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053525
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pectin acetylesterase 7
translation: MIGVKRGAWIYLIVLLISLTVEGFDVPLTLVQDAVAKGAVCLDGSPPAYHFAPGFGSGVDNWLVHMEGGGWCSNVEECKQRTKNFRGSSKYMEQLSFSGILGNKQTSSPGIAFNNYFL
SIO_010081: LOC105053525
subclass of: SO_0000673
so part of: LOC105053525
location: complement(join(2107168..2107323,2107775..2107857,2108034..2108151))
location: region:2107168-2108151:-1
so has part: feature:2108034-2108151:-1:exon
so has part: feature:2107775-2107857:-1:exon
so has part: feature:2107168-2107323:-1:exon

XP_010933034.1
type: Protein
SIO_000068: ncbiprotein

position:2107168:-1
position: 2107168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2108151:-1
position: 2108151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2108034-2108151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2107775-2107857:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2107168-2107323:-1:exon

LOC105053526
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053526
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2139334..2177190
location: region:2139334-2177190:1
so has part: feature:2139334-2177190:1:exon
subclass of: SO_0000010

105053526
type: Gene
SIO_000068: ncbigene

position:2139334:1
position: 2139334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2177190:1
position: 2177190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2139334-2177190:1:exon

LOC105053526
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053526
product: carbon catabolite repressor protein 4 homolog 4
inference: similar to RNA sequence (same species):INSD:GFDD01005673.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 52 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029267151.1
SIO_010081: LOC105053526
subclass of: SO_0000673
so part of: LOC105053526
location: join(2139334..2139575,2144041..2144263,2146067..>2146156,<2161768..2161817,2163876..2163945,2165252..2165373,2167369..2167502,2168209..2168359,2170522..2170669,2176076..2177190)
location: region:2139334-2177190:1
so has part: feature:2139334-2139575:1:exon
so has part: feature:2144041-2144263:1:exon
so has part: feature:2146067-2146156:1:exon
so has part: feature:2161768-2161817:1:exon
so has part: feature:2163876-2163945:1:exon
so has part: feature:2165252-2165373:1:exon
so has part: feature:2167369-2167502:1:exon
so has part: feature:2168209-2168359:1:exon
so has part: feature:2170522-2170669:1:exon
so has part: feature:2176076-2177190:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2139334-2139575:1:exon

position:2139575:1
position: 2139575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2144041-2144263:1:exon

position:2144041:1
position: 2144041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2144263:1
position: 2144263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2146067-2146156:1:exon

position:2146067:1
position: 2146067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2146156:1
position: 2146156
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2161768-2161817:1:exon

position:2161768:1
position: 2161768
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2161817:1
position: 2161817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2163876-2163945:1:exon

position:2163876:1
position: 2163876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2163945:1
position: 2163945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2165252-2165373:1:exon

position:2165252:1
position: 2165252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2165373:1
position: 2165373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2167369-2167502:1:exon

position:2167369:1
position: 2167369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2167502:1
position: 2167502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2168209-2168359:1:exon

position:2168209:1
position: 2168209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2168359:1
position: 2168359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2170522-2170669:1:exon

position:2170522:1
position: 2170522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2170669:1
position: 2170669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2176076-2177190:1:exon

position:2176076:1
position: 2176076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053526
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053526
inference: similar to RNA sequence (same species):INSD:GFDD01005673.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 52 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbon catabolite repressor protein 4 homolog 4
translation: MQNTTMLTLWFTSGGLVLTPRTGSNNPHGSSGRICKSKMSGMPKPPCPKFISLEDGEFTTKNTSNGFKFRLVSYNILAQVYVKSSYFPHSPSSCLKWKARSQAILMEFKNLSADFLCIQELDEYNSFYKSNMESLGYSSLYIQRTGQKRDGCGIFYRSSSAELILMEEIHYNDLVNGIDYENVSTEIESNNTLDVDRREEASGKDSTKANSHGDQGDPNDPCVRLKRDCVGLLMAFKLRDPSNHLIVVANTHIYWDPNWADVKLAQVKYLRRRVSQFKEIVSNKFCSTPSVIIAGDFNSTPGDEVYQYLVSANSDSEAPAIQLCSLYATNGGEPPFTNCTPDFTGTLDYIFLSDPGYLKPVSLLEVPGPQSADIIGGLPNHYHPSDHLPIGADFVVLGSSNSLIIPELQDVEDRLSKFEIGEQMKVQNN
SIO_010081: LOC105053526
subclass of: SO_0000673
so part of: LOC105053526
location: join(2144169..2144263,2146067..>2146156,<2161768..2161817,2163876..2163945,2165252..2165373,2167369..2167502,2168209..2168359,2170522..2170669,2176076..2176453)
location: region:2144169-2176453:1
so has part: feature:2144169-2144263:1:exon
so has part: feature:2146067-2146156:1:exon
so has part: feature:2161768-2161817:1:exon
so has part: feature:2163876-2163945:1:exon
so has part: feature:2165252-2165373:1:exon
so has part: feature:2167369-2167502:1:exon
so has part: feature:2168209-2168359:1:exon
so has part: feature:2170522-2170669:1:exon
so has part: feature:2176076-2176453:1:exon

XP_029122984.1
type: Protein
SIO_000068: ncbiprotein

position:2144169:1
position: 2144169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2176453:1
position: 2176453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2144169-2144263:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2146067-2146156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2161768-2161817:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2163876-2163945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2165252-2165373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2167369-2167502:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2168209-2168359:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2170522-2170669:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2176076-2176453:1:exon

LOC105053527
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053527
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2221603..2224212
location: region:2221603-2224212:1
so has part: feature:2221603-2224212:1:exon
subclass of: SO_0000010

105053527
type: Gene
SIO_000068: ncbigene

position:2221603:1
position: 2221603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2224212:1
position: 2224212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2221603-2224212:1:exon

LOC105053527
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053527
product: stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 117 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_010934734.3
SIO_010081: LOC105053527
subclass of: SO_0000673
so part of: LOC105053527
location: join(2221603..2221823,2222548..2223058,2223489..2224212)
location: region:2221603-2224212:1
so has part: feature:2221603-2221823:1:exon
so has part: feature:2222548-2223058:1:exon
so has part: feature:2223489-2224212:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2221603-2221823:1:exon

position:2221823:1
position: 2221823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2222548-2223058:1:exon

position:2222548:1
position: 2222548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2223058:1
position: 2223058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2223489-2224212:1:exon

position:2223489:1
position: 2223489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053527
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053527
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic
translation: MPLSLSFPPHNLSCFSSSLVFGARKTKSLKILMTLSPPPKPREVKNDMRKQRSPLEIEIKEVMTHSMHPEKLEIFKSLEKWAEDNILTLLKPVESSWQPQDFLPDPSAEGFFDSVKEIRDQTAGIPDDYYVCLVGNMITEEALPTYQSVFNTFDGVRDQTGASRSSWARWTRMWSAEENRHGDILNKYLYLSGRLDMRQIEKTIQYLIGSGMIIGAENNPYRGFIYTSFQERATFISHGNTARHAKDHGDPLLAKICGLIAADEKRHEAAYSKVVEKLFEIDPDTTMMALADMMKKRITMPALLMFDGRDDNLFNHYSSVVQRIGVYTAKDYGDIVEFFVKRWNVEEITGFSGEGRRAQDYVCGLPQKIRRMDERAQERRVKQSQMVPFSWIFNRSVLV
SIO_010081: LOC105053527
subclass of: SO_0000673
so part of: LOC105053527
location: join(2221699..2221823,2222548..2223058,2223489..2224052)
location: region:2221699-2224052:1
so has part: feature:2221699-2221823:1:exon
so has part: feature:2222548-2223058:1:exon
so has part: feature:2223489-2224052:1:exon

XP_010933036.1
type: Protein
SIO_000068: ncbiprotein

position:2221699:1
position: 2221699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2224052:1
position: 2224052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2221699-2221823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2222548-2223058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2223489-2224052:1:exon

LOC105053553
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053553
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2489388..>2490712
location: region:2489388-2490712:1
so has part: feature:2489388-2490712:1:exon
subclass of: SO_0000010

105053553
type: Gene
SIO_000068: ncbigene

position:2489388:1
position: 2489388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2490712:1
position: 2490712
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2489388-2490712:1:exon

LOC105053553
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053553
product: stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like
inference: similar to RNA sequence (same species):INSD:GFDD01006010.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 622 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_010934764.3
SIO_010081: LOC105053553
subclass of: SO_0000673
so part of: LOC105053553
location: join(2489388..2489517,2490205..>2490712)
location: region:2489388-2490712:1
so has part: feature:2489388-2489517:1:exon
so has part: feature:2490205-2490712:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2489388-2489517:1:exon

position:2489517:1
position: 2489517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2490205-2490712:1:exon

position:2490205:1
position: 2490205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053553
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053553
inference: similar to RNA sequence (same species):INSD:GFDD01006010.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 564 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like
translation: MMALMLSFPPQNPSCFCSLDSGTRKTKSSRILMTLSPPSKPTEVKNDMRKQRSPLEVEIKEVTHSMHPEKQEIFKSLEKWAEDNILTLLKPVESSWQPQDFLPDPSAEGFFDGIKQIRDRAAGIPDEYYVCLVGNMITEEALPTYQTFVNTLDGVRDETASSLSSWARWTRMWSAEENRHGDVLHRYLYLSGRLNMRQIEKTIQYLIGSGMNVHAENNPYLGFIYTSFQERATFISHGNTARHAKDHGDLLLAKICGLIAADEKRHEAAYTKIIEKLFEIDPDTTMLALADMMEKRITMPALLMFDGQDDNVFNHYSSVAQRIGVYTAKDYGDIVEFFVKRWNVEEITGLSGEGRRAQDYVCGLPQKIRRMDERAQERRVKQSQMVPFSWIFNRSVLV
SIO_010081: LOC105053553
subclass of: SO_0000673
so part of: LOC105053553
location: join(2489393..2489517,2490205..>2490712)
location: region:2489393-2490712:1
so has part: feature:2489393-2489517:1:exon
so has part: feature:2490205-2490712:1:exon

XP_010933066.2
type: Protein
SIO_000068: ncbiprotein

position:2489393:1
position: 2489393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2489393-2489517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2490205-2490712:1:exon

LOC105053529
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053529
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2580310..2585715)
location: region:2580310-2585715:-1
so has part: feature:2580310-2585715:-1:exon
subclass of: SO_0000010

105053529
type: Gene
SIO_000068: ncbigene

position:2580310:-1
position: 2580310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2585715:-1
position: 2585715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2580310-2585715:-1:exon

LOC105053529
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053529
product: probable folate-biopterin transporter 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_010934736.3
SIO_010081: LOC105053529
subclass of: SO_0000673
so part of: LOC105053529
location: complement(join(2580310..2580698,2580846..2581908,2585330..2585713))
location: region:2580310-2585713:-1
so has part: feature:2585330-2585713:-1:exon
so has part: feature:2580846-2581908:-1:exon
so has part: feature:2580310-2580698:-1:exon

position:2585713:-1
position: 2585713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585330-2585713:-1:exon

position:2585330:-1
position: 2585330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2580846-2581908:-1:exon

position:2580846:-1
position: 2580846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2581908:-1
position: 2581908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2580310-2580698:-1:exon

position:2580698:-1
position: 2580698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053529
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053529
product: probable folate-biopterin transporter 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_010934737.3
SIO_010081: LOC105053529
subclass of: SO_0000673
so part of: LOC105053529
location: complement(join(2580376..2581897,2585330..2585715))
location: region:2580376-2585715:-1
so has part: feature:2585330-2585715:-1:exon
so has part: feature:2580376-2581897:-1:exon

position:2580376:-1
position: 2580376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585330-2585715:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2580376-2581897:-1:exon

position:2581897:-1
position: 2581897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053529
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053529
product: probable folate-biopterin transporter 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_010934735.3
SIO_010081: LOC105053529
subclass of: SO_0000673
so part of: LOC105053529
location: complement(join(2580376..2581908,2585330..2585712))
location: region:2580376-2585712:-1
so has part: feature:2585330-2585712:-1:exon
so has part: feature:2580376-2581908:-1:exon

position:2585712:-1
position: 2585712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585330-2585712:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2580376-2581908:-1:exon

LOC105053529
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053529
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable folate-biopterin transporter 7 isoform X1
translation: MGEKNKARETTTMDRVKWMVGLGFWVQGFRCFPWLGINFYLKDGLGVPASALQILQNSANLPMVAKPLYGLLSDAVAIRGQRRLPYVALGALLQAVSWLAIVLLPETMSIAFLTLFLLLGNLGASIAEVANDAIVTEAGKQLQSPSMSGQLQSFAMMSFASAGALGNLLGGIAINLLSPRTMFLLFALLLLLQFFTTVAVPESSLNLPKKAGNSSKSSSIRKQLSELKIALRKPEISRSIVWFSASYAVVPLLIGTMFFYQTQHLNLDPSVIGFSKVFGQAALMAWSVAYNKQFKKTPARKVLSMLQVTIALLMVSDVLFVKGIYRDMGVSDSVYVVIFSGLLEALFQFKGLPFTVLMAQLCPAGCEGSVMAFLMSALALAIIVSGYLGVALAAFMGITGTDFSGLTVGILIQAACTLLPLCWSSWIPDTGRPEKKEE
SIO_010081: LOC105053529
subclass of: SO_0000673
so part of: LOC105053529
location: complement(join(2580863..2581908,2585330..2585600))
location: region:2580863-2585600:-1
so has part: feature:2585330-2585600:-1:exon
so has part: feature:2580863-2581908:-1:exon

XP_010933037.1
type: Protein
SIO_000068: ncbiprotein

position:2580863:-1
position: 2580863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2585600:-1
position: 2585600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585330-2585600:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2580863-2581908:-1:exon

LOC105053529
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053529
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable folate-biopterin transporter 7 isoform X1
translation: MGEKNKARETTTMDRVKWMVGLGFWVQGFRCFPWLGINFYLKDGLGVPASALQILQNSANLPMVAKPLYGLLSDAVAIRGQRRLPYVALGALLQAVSWLAIVLLPETMSIAFLTLFLLLGNLGASIAEVANDAIVTEAGKQLQSPSMSGQLQSFAMMSFASAGALGNLLGGIAINLLSPRTMFLLFALLLLLQFFTTVAVPESSLNLPKKAGNSSKSSSIRKQLSELKIALRKPEISRSIVWFSASYAVVPLLIGTMFFYQTQHLNLDPSVIGFSKVFGQAALMAWSVAYNKQFKKTPARKVLSMLQVTIALLMVSDVLFVKGIYRDMGVSDSVYVVIFSGLLEALFQFKGLPFTVLMAQLCPAGCEGSVMAFLMSALALAIIVSGYLGVALAAFMGITGTDFSGLTVGILIQAACTLLPLCWSSWIPDTGRPEKKEE
SIO_010081: LOC105053529
subclass of: SO_0000673
so part of: LOC105053529
location: complement(join(2580863..2581908,2585330..2585600))
location: region:2580863-2585600:-1
so has part: feature:2585330-2585600:-1:exon
so has part: feature:2580863-2581908:-1:exon

XP_010933038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2585330-2585600:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2580863-2581908:-1:exon

LOC105053529
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053529
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable folate-biopterin transporter 7 isoform X2
translation: MGWASPPPPSRSSRTRQISPWSPSPSTASSPTPSPSAASAASPTSPSAAVSWLAIVLLPETMSIAFLTLFLLLGNLGASIAEVANDAIVTEAGKQLQSPSMSGQLQSFAMMSFASAGALGNLLGGIAINLLSPRTMFLLFALLLLLQFFTTVAVPESSLNLPKKAGNSSKSSSIRKQLSELKIALRKPEISRSIVWFSASYAVVPLLIGTMFFYQTQHLNLDPSVIGFSKVFGQAALMAWSVAYNKQFKKTPARKVLSMLQVTIALLMVSDVLFVKGIYRDMGVSDSVYVVIFSGLLEALFQFKGLPFTVLMAQLCPAGCEGSVMAFLMSALALAIIVSGYLGVALAAFMGITGTDFSGLTVGILIQAACTLLPLCWSSWIPDTGRPEKKEE
SIO_010081: LOC105053529
subclass of: SO_0000673
so part of: LOC105053529
location: complement(join(2580863..2581897,2585330..2585473))
location: region:2580863-2585473:-1
so has part: feature:2585330-2585473:-1:exon
so has part: feature:2580863-2581897:-1:exon

XP_010933039.1
type: Protein
SIO_000068: ncbiprotein

position:2585473:-1
position: 2585473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585330-2585473:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2580863-2581897:-1:exon

LOC105053530
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2587411..2598751)
location: region:2587411-2598751:-1
so has part: feature:2587411-2598751:-1:exon
subclass of: SO_0000010

105053530
type: Gene
SIO_000068: ncbigene

position:2587411:-1
position: 2587411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2598751:-1
position: 2598751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2587411-2598751:-1:exon

LOC105053530
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053530
product: U-box domain-containing protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_010934738.3
SIO_010081: LOC105053530
subclass of: SO_0000673
so part of: LOC105053530
location: complement(join(2587411..2587767,2591701..2593758,2593866..2593955,2594947..2595227,2598398..2598751))
location: region:2587411-2598751:-1
so has part: feature:2598398-2598751:-1:exon
so has part: feature:2594947-2595227:-1:exon
so has part: feature:2593866-2593955:-1:exon
so has part: feature:2591701-2593758:-1:exon
so has part: feature:2587411-2587767:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2598398-2598751:-1:exon

position:2598398:-1
position: 2598398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2594947-2595227:-1:exon

position:2594947:-1
position: 2594947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2595227:-1
position: 2595227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2593866-2593955:-1:exon

position:2593866:-1
position: 2593866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2593955:-1
position: 2593955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2591701-2593758:-1:exon

position:2591701:-1
position: 2591701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2593758:-1
position: 2593758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2587411-2587767:-1:exon

position:2587767:-1
position: 2587767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U-box domain-containing protein 4
translation: MKEAKSNPAKSVRTRAPTAGELDGEGMMEISLLKTLLNNITCFDLLSSSNAIKSELVTRYVRKIDEILEILKPVLDQAVASKISSDGKLILLLKELDGVVNEARELVGCWHPTMSKVYFVLQIESIIANIWKYSIEVCQLLNSTSTPIEHYVQKIQHIHYEQISDVIKEAIRDQREKFIPKPELLDKILNSLSLSSNQELLMEAAALEKFKMKVGHGENHIEVEDIDHMIALITSMHECLVKIKQLHSINGVPIPADFCCPLSLELISDPVIVDSGQTYERAFIRKWLDQGFNVCPKTRQTLGNTNLVPNYTVKLLIANWCESNDIKLPDPMKSISMNLSLSSLSPIDSSSNDCNVPYSGHSPRANHPRSPESNKCMISSHKDSHLSSGDLQGNYLHEKPLSPRRSSLPVALSLQLENRCDANTARLSLVTAVDSGGQTANQTKQDSQASMVDGQFQGHKQSISACSSVSDNDYPQGTGDANVVSRVSSDLTHYSSDASGEVTQDTPASSGEVTRETPASSAPQREPEFPPRLGEARFRSQTIFQWPSIPRIISSPSMDSRPDLSGVETQVRKLAEDLKSDSVDVQRAATAELRFLTKHNMENRVVIANCGSISLLVDLLNSVDPETQENAVTALLNLSINDNNKIAIANAGAIDLLIHVLETGNCQARENSAATLFSLSVIGENKVRIGRSGAIRPLVELLGNGTPRGKKDATTALFNLSIFHENKVRIVRAGAVNPLVELMDPAAGLVDKAVAVLANLATIQEGRTAIGHSEGIPSLVEVVELGSARGKENAAAALLQLCTNSNRFCTQVLQQGAVPPLVALSQSGTPRAKEKAHALLRYFRDQRQCNAGRG
SIO_010081: LOC105053530
subclass of: SO_0000673
so part of: LOC105053530
location: complement(join(2587708..2587767,2591701..2593758,2593866..2593955,2594947..2595227,2598398..2598473))
location: region:2587708-2598473:-1
so has part: feature:2598398-2598473:-1:exon
so has part: feature:2594947-2595227:-1:exon
so has part: feature:2593866-2593955:-1:exon
so has part: feature:2591701-2593758:-1:exon
so has part: feature:2587708-2587767:-1:exon

XP_010933040.1
type: Protein
SIO_000068: ncbiprotein

position:2587708:-1
position: 2587708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2598473:-1
position: 2598473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2598398-2598473:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2594947-2595227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2593866-2593955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2591701-2593758:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2587708-2587767:-1:exon

LOC105053531
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2601105..2604217
location: region:2601105-2604217:1
so has part: feature:2601105-2604217:1:exon
subclass of: SO_0000010

105053531
type: Gene
SIO_000068: ncbigene

position:2601105:1
position: 2601105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2604217:1
position: 2604217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2601105-2604217:1:exon

LOC105053531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053531
product: protein Rf1, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019853606.2
SIO_010081: LOC105053531
subclass of: SO_0000673
so part of: LOC105053531
location: 2601105..2604217
location: region:2601105-2604217:1
so has part: feature:2601105-2604217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2601105-2604217:1:exon

LOC105053531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Rf1, mitochondrial-like
translation: MRPTRFLALPSTSFSPATSSSPSAEKTIGRTKPYLTDSALIERCRSNALTVEDALDLFDAAVAADPKPSIYAINLLLGAIAGMKHYPIVISLCNKLNVLSGIQPNIHTYSIVINSCCRMSSVNLGFGFLGGLLKRSFSPRTAIFNSLINGLGADKRVAEAAMLFDKMSLMGCEPNVVSCNALIKGLCNTGSTALALELHQKMAMMGESCMPDVITYNTIIHHLCKEGHVSYACKLLDEMIRVGVKPDVRTYNSIIYGHSTLGHWKEAVGILKEMMHWHLSPDVVTFSMLMDSFSKCDKTAEAHKLLDLMKERGEKPDVIPYTILVRGYCQEGHLADARRVFDSMLAKGPAPSSHTYSVLINGCVKNQKLDEAIELFNKMQREGVKPDIITYSTILDGLCHLGKIEDVRGLLDEMMSQGIHPDVVTYTSIMCGFCRLGKWKEAHQLLYEMIEQQIHLDAVTFTALIDAICKEGMVQEAHGLLEVMICRGIEPDIVTYNTLMDGYCVVGKLNDAVRVFDLMVSKGYEPDAFTYNILIDSYCKSGKIDDALSLFNAMPHKGVKHTVIIYNAMLAGLYRVGRVAEAEKLCGKMLAAGICPSLHTYNIILDGLCKNQYIDEAMKLFQGVLSSNVNLDIVCFNTMIDGFIKAGRFKAAKNIFNTIPTKDLKPDAITFNIMVNGLMKEGLFDEATNLLLHMEKSGCPANSTTFNTGLLEKEEI
SIO_010081: LOC105053531
subclass of: SO_0000673
so part of: LOC105053531
location: 2601252..2603402
location: region:2601252-2603402:1
so has part: feature:2601252-2603402:1:exon

XP_019709165.1
type: Protein
SIO_000068: ncbiprotein

position:2601252:1
position: 2601252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2603402:1
position: 2603402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2601252-2603402:1:exon

LOC105053533
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053533
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2699151..2702105
location: region:2699151-2702105:1
so has part: feature:2699151-2702105:1:exon
subclass of: SO_0000010

105053533
type: Gene
SIO_000068: ncbigene

position:2699151:1
position: 2699151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2702105:1
position: 2702105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2699151-2702105:1:exon

LOC105053533
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053533
product: protein Rf1, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010934740.3
SIO_010081: LOC105053533
subclass of: SO_0000673
so part of: LOC105053533
location: 2699151..2702105
location: region:2699151-2702105:1
so has part: feature:2699151-2702105:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2699151-2702105:1:exon

LOC105053533
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053533
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Rf1, mitochondrial-like
translation: MDRLEFPEGQVSLFFLPPMRRTRLPSHSSTSSPPTSSSSSPIKKTIVRTKFITKRALIERCRSTAFTVEDALDLFNAAVSADPMPSIYSINLLLSAIARMKHYPVVISLCKKLNLLSGIQPNTCTYSIVISSCCRMSSVNLGFGFLGGLLKRGLSPTTVIFNSLIDGLGTEKKVGEAAMLFDKMSLMGCQPNVVSCNALIKGLCNTGSTALALELHQKMAMLGDSCRPDIITYNTIIHYLCKEGHVSDACKLLEEMSCVGIKPDVRTYTSIIYGHSTLGHWKQAVGIFKEMIDRRLSPDVVTFNMLMDSLSKHEKTGQAHKLLDLMKERGEKPDVISYSILVRGYCQEGHLANATEVFDSMLVKGPAPDSCTYSVLINGFVKNQKMDEAIELFNKMQQRGIKPNTIIYGTVLDGLCHLGKMEDVRGLLDEMMSRGIHPDVVTYTSIMCGFCRLGKWKEAHQFLYEMTEQQIHPNVVTFNALIDAFCKEGMVQEAHGLLEVMICRGIEPDVVTYSTLMDGYTMVGQLNDAVRVFDLMVLKGHEPNAFTYNILIDSYSKSGKIDEALSLFNAMPHKGVQHTVITYNTMLAGLYHVGRVADAEKLRNKMLAAGICPSLHTYSIILDGLGKNQYIDEAMKLFQGALSSNVNLDIVCFNIMIDGLVKAGMFKAAKDIFNTIHTKDLKPDVITFNIMINGLMKEGWFDEASNLLLHMENSGCPANSTTFNTIIYGLLEKEEIERAIDMIRKMKDRGFSLGASTASQIFNLFSKDGQYHEYLKLLPDFYQHGSK
SIO_010081: LOC105053533
subclass of: SO_0000673
so part of: LOC105053533
location: 2699154..2701517
location: region:2699154-2701517:1
so has part: feature:2699154-2701517:1:exon

XP_010933042.2
type: Protein
SIO_000068: ncbiprotein

position:2699154:1
position: 2699154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2701517:1
position: 2701517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2699154-2701517:1:exon

LOC105053534
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2735868..2765730)
location: region:2735868-2765730:-1
so has part: feature:2735868-2765730:-1:exon
subclass of: SO_0000011

105053534
type: Gene
SIO_000068: ncbigene

position:2735868:-1
position: 2735868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2765730:-1
position: 2765730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2735868-2765730:-1:exon

LOC105053534
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51953
nc RNA class: lncRNA
gene: LOC105053534
product: uncharacterized LOC105053534
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_833472.1
SIO_010081: LOC105053534
subclass of: SO_0000673
so part of: LOC105053534
location: complement(join(2735868..2736215,2765689..2765730))
location: region:2735868-2765730:-1
so has part: feature:2765689-2765730:-1:exon
so has part: feature:2735868-2736215:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2765689-2765730:-1:exon

position:2765689:-1
position: 2765689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2735868-2736215:-1:exon

position:2736215:-1
position: 2736215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053535
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2800646..2802171)
location: region:2800646-2802171:-1
so has part: feature:2800646-2802171:-1:exon
subclass of: SO_0000010

105053535
type: Gene
SIO_000068: ncbigene

position:2800646:-1
position: 2800646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2802171:-1
position: 2802171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2800646-2802171:-1:exon

LOC105053535
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053535
product: xylulose 5-phosphate/phosphate translocator, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010934741.3
SIO_010081: LOC105053535
subclass of: SO_0000673
so part of: LOC105053535
location: complement(2800646..2802171)
location: region:2800646-2802171:-1
so has part: feature:2800646-2802171:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2800646-2802171:-1:exon

LOC105053535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: xylulose 5-phosphate/phosphate translocator, chloroplastic
translation: MLSLHTPLPFSSTALLGRTKTHNPRHHATPNSTLTNLHALVRLPPSVLLQRPTLTFPSLIPRAAAADGDHPIAPIPKENQEDLDDSKDGEDSIPDQNEANEDNDDDEEEEDEDEEEENSTRTKDSITKSVPKNESKSKTNTLNLALVVGLWYFHSVIFNIYNKKVLNLFPYPWLLASFQLLVASLWMGFLWASRLQSFPRVSKKFFAALLGPAFFHAIGHVYACVSFSKVAVSFTHVIKTSEPVFSVVLSALHGRFYPLHVWLSVLPIVAGCSLAAVTEASFDAHGLWTALISNAGFVLRNIHSKHSLYDFSHVSGLNLYGWITIVSLLYLFPVAVFVEGSRWAGGVQRALAAVPTPWTFYGWVLLSGVFYHLYNQTSHRALEKMSSSAFSVGNSMKRVVVIVASVLVFGNPIRPLNALGSGIAILGTFLYSRATATEKKDNKAVSKTKTS
SIO_010081: LOC105053535
subclass of: SO_0000673
so part of: LOC105053535
location: complement(2800816..2802171)
location: region:2800816-2802171:-1
so has part: feature:2800816-2802171:-1:exon

XP_010933043.1
type: Protein
SIO_000068: ncbiprotein

position:2800816:-1
position: 2800816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2800816-2802171:-1:exon

LOC105053536
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2830735..2836020)
location: region:2830735-2836020:-1
so has part: feature:2830735-2836020:-1:exon
subclass of: SO_0000010

105053536
type: Gene
SIO_000068: ncbigene

position:2830735:-1
position: 2830735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2836020:-1
position: 2836020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2830735-2836020:-1:exon

LOC105053536
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053536
product: probable serine/threonine-protein kinase PBL15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 115 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_010934742.2
SIO_010081: LOC105053536
subclass of: SO_0000673
so part of: LOC105053536
location: complement(join(2830735..2831303,2832049..2832172,2832328..2832464,2833190..2833325,2835500..2836020))
location: region:2830735-2836020:-1
so has part: feature:2835500-2836020:-1:exon
so has part: feature:2833190-2833325:-1:exon
so has part: feature:2832328-2832464:-1:exon
so has part: feature:2832049-2832172:-1:exon
so has part: feature:2830735-2831303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2835500-2836020:-1:exon

position:2835500:-1
position: 2835500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2833190-2833325:-1:exon

position:2833190:-1
position: 2833190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2833325:-1
position: 2833325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2832328-2832464:-1:exon

position:2832328:-1
position: 2832328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2832464:-1
position: 2832464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2832049-2832172:-1:exon

position:2832049:-1
position: 2832049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2832172:-1
position: 2832172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2830735-2831303:-1:exon

position:2831303:-1
position: 2831303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053536
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable serine/threonine-protein kinase PBL15
translation: MQTPTQPLSSPPFSNSSPPYPSLISIFLLLAINPIMPRPWRPFAAAKCCTVEDHVVLGNLSRCRPSRSQLSKKVAELTSFRRLSSSDLSSSTSSARFNEELAHSFGAGLYAFQLSELRAITHDFSSNYLLGEGGFGTVHKGYVDDNMRPGLKAQAVAVKLLDMEGLQGHREWLAEVIFLGQFRHPHLVKLIGYCCEDEERLLVYEFMPRGSLENHLFKRISMTLSWGTRMKIAIGTAKGLAFLHGSEKPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGEDTHVTTRVMGTHGYAAPEYVMTGHLTTKSDVYSYGVVLLELLTGRRAMDKSRPKSEEKLVHWAKPYLTSSRKLRCIMDPKLGGQYSIKGAREVASLASQCISPNPKDRPRMAAVVEILEGLLHLKDMAVNSSAWPAAPIAGRNAISAKTKMNNSNARRRSISTKLA
SIO_010081: LOC105053536
subclass of: SO_0000673
so part of: LOC105053536
location: complement(join(2830870..2831303,2832049..2832172,2832328..2832464,2833190..2833325,2835500..2836018))
location: region:2830870-2836018:-1
so has part: feature:2835500-2836018:-1:exon
so has part: feature:2833190-2833325:-1:exon
so has part: feature:2832328-2832464:-1:exon
so has part: feature:2832049-2832172:-1:exon
so has part: feature:2830870-2831303:-1:exon

XP_010933044.2
type: Protein
SIO_000068: ncbiprotein

position:2830870:-1
position: 2830870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2836018:-1
position: 2836018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2835500-2836018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2833190-2833325:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2832328-2832464:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2832049-2832172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2830870-2831303:-1:exon

LOC105053537
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2855852..2863997
location: region:2855852-2863997:1
so has part: feature:2855852-2863997:1:exon
subclass of: SO_0000010

105053537
type: Gene
SIO_000068: ncbigene

position:2855852:1
position: 2855852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2863997:1
position: 2863997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2855852-2863997:1:exon

LOC105053537
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053537
product: maltose excess protein 1-like, chloroplastic, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_010934743.3
SIO_010081: LOC105053537
subclass of: SO_0000673
so part of: LOC105053537
location: join(2855852..2856148,2856231..2856386,2856484..2856774,2856859..2856948,2860858..2860959,2861050..2861168,2862531..2862593,2863544..2863997)
location: region:2855852-2863997:1
so has part: feature:2855852-2856148:1:exon
so has part: feature:2856231-2856386:1:exon
so has part: feature:2856484-2856774:1:exon
so has part: feature:2856859-2856948:1:exon
so has part: feature:2860858-2860959:1:exon
so has part: feature:2861050-2861168:1:exon
so has part: feature:2862531-2862593:1:exon
so has part: feature:2863544-2863997:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2855852-2856148:1:exon

position:2856148:1
position: 2856148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2856231-2856386:1:exon

position:2856231:1
position: 2856231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2856386:1
position: 2856386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2856484-2856774:1:exon

position:2856484:1
position: 2856484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2856774:1
position: 2856774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2856859-2856948:1:exon

position:2856859:1
position: 2856859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2856948:1
position: 2856948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2860858-2860959:1:exon

position:2860858:1
position: 2860858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2860959:1
position: 2860959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2861050-2861168:1:exon

position:2861050:1
position: 2861050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2861168:1
position: 2861168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2862531-2862593:1:exon

position:2862531:1
position: 2862531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2862593:1
position: 2862593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2863544-2863997:1:exon

position:2863544:1
position: 2863544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053537
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053537
product: maltose excess protein 1-like, chloroplastic, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_010934745.3
SIO_010081: LOC105053537
subclass of: SO_0000673
so part of: LOC105053537
location: join(2855852..2856148,2856231..2856386,2856484..2856774,2856859..2856948,2860858..2860959,2861050..2861168,2863544..2863997)
location: region:2855852-2863997:1
so has part: feature:2855852-2856148:1:exon
so has part: feature:2856231-2856386:1:exon
so has part: feature:2856484-2856774:1:exon
so has part: feature:2856859-2856948:1:exon
so has part: feature:2860858-2860959:1:exon
so has part: feature:2861050-2861168:1:exon
so has part: feature:2863544-2863997:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2855852-2856148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2856231-2856386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2856484-2856774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2856859-2856948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2860858-2860959:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2861050-2861168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2863544-2863997:1:exon

LOC105053537
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053537
product: maltose excess protein 1-like, chloroplastic, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_010934744.3
SIO_010081: LOC105053537
subclass of: SO_0000673
so part of: LOC105053537
location: join(2855852..2856148,2856231..2856386,2856484..2856774,2856859..2856948,2860858..2860959,2861050..2861168,2862531..2862593,2862692..2862753,2863544..2863995)
location: region:2855852-2863995:1
so has part: feature:2855852-2856148:1:exon
so has part: feature:2856231-2856386:1:exon
so has part: feature:2856484-2856774:1:exon
so has part: feature:2856859-2856948:1:exon
so has part: feature:2860858-2860959:1:exon
so has part: feature:2861050-2861168:1:exon
so has part: feature:2862531-2862593:1:exon
so has part: feature:2862692-2862753:1:exon
so has part: feature:2863544-2863995:1:exon

position:2863995:1
position: 2863995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2855852-2856148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2856231-2856386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2856484-2856774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2856859-2856948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2860858-2860959:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2861050-2861168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2862531-2862593:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2862692-2862753:1:exon

position:2862692:1
position: 2862692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2862753:1
position: 2862753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2863544-2863995:1:exon

LOC105053537
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: maltose excess protein 1-like, chloroplastic isoform X1
translation: MASTAVAPPPSRLLRLRRLPPSLRPSTPRFFLSLPSPALLEPHLLPLKPLNPFLPLAPLFRPRRWPPSAITSASSDSPHRPTIKDSSTFREWDSLTAKFAGAANVPFFLLQLPQIVLNARNLLAGNKAALFAVPWLGMLTGLLGNLSLLSYFAKKKETEAILIQTLGVLSNYVVIAQLAIAEAMPLPQFGVTSAVVASGLVLNFLNYFGWLHDGIWQLWEDFITIGGVSVLPQVMWSTFVPYIPNSILPGLISGTVAVVAVIMARSGKLSNRGIKFVGSISGWTATLLFMWMPVAQMWTNYLHPDNIEGLSALTMLLAMIGNGLMIPRALFIRDLMWCTGSAWATFLLGWGNLACMYWNGSLERYCSLWLQFTLDILKRISVWTMMWILLMTYLQHYMDRCWSSFLLDLVQSFKLT
SIO_010081: LOC105053537
subclass of: SO_0000673
so part of: LOC105053537
location: join(2855897..2856148,2856231..2856386,2856484..2856774,2856859..2856948,2860858..2860959,2861050..2861168,2862531..2862593,2863544..2863721)
location: region:2855897-2863721:1
so has part: feature:2855897-2856148:1:exon
so has part: feature:2856231-2856386:1:exon
so has part: feature:2856484-2856774:1:exon
so has part: feature:2856859-2856948:1:exon
so has part: feature:2860858-2860959:1:exon
so has part: feature:2861050-2861168:1:exon
so has part: feature:2862531-2862593:1:exon
so has part: feature:2863544-2863721:1:exon

XP_010933045.1
type: Protein
SIO_000068: ncbiprotein

position:2855897:1
position: 2855897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2863721:1
position: 2863721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2855897-2856148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2856231-2856386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2856484-2856774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2856859-2856948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2860858-2860959:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2861050-2861168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2862531-2862593:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2863544-2863721:1:exon

LOC105053537
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: maltose excess protein 1-like, chloroplastic isoform X3
translation: MASTAVAPPPSRLLRLRRLPPSLRPSTPRFFLSLPSPALLEPHLLPLKPLNPFLPLAPLFRPRRWPPSAITSASSDSPHRPTIKDSSTFREWDSLTAKFAGAANVPFFLLQLPQIVLNARNLLAGNKAALFAVPWLGMLTGLLGNLSLLSYFAKKKETEAILIQTLGVLSNYVVIAQLAIAEAMPLPQFGVTSAVVASGLVLNFLNYFGWLHDGIWQLWEDFITIGGVSVLPQVMWSTFVPYIPNSILPGLISGTVAVVAVIMARSGKLSNRGIKFVGSISGWTATLLFMWMPVAQMWTNYLHPDNIEGLSALTMLLAMIGNGLMIPRALFIRDLMWNGSLERYCSLWLQFTLDILKRISVWTMMWILLMTYLQHYMDRCWSSFLLDLVQSFKLT
SIO_010081: LOC105053537
subclass of: SO_0000673
so part of: LOC105053537
location: join(2855897..2856148,2856231..2856386,2856484..2856774,2856859..2856948,2860858..2860959,2861050..2861168,2863544..2863721)
location: region:2855897-2863721:1
so has part: feature:2855897-2856148:1:exon
so has part: feature:2856231-2856386:1:exon
so has part: feature:2856484-2856774:1:exon
so has part: feature:2856859-2856948:1:exon
so has part: feature:2860858-2860959:1:exon
so has part: feature:2861050-2861168:1:exon
so has part: feature:2863544-2863721:1:exon

XP_010933047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2855897-2856148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2856231-2856386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2856484-2856774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2856859-2856948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2860858-2860959:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2861050-2861168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2863544-2863721:1:exon

LOC105053537
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: maltose excess protein 1-like, chloroplastic isoform X2
translation: MASTAVAPPPSRLLRLRRLPPSLRPSTPRFFLSLPSPALLEPHLLPLKPLNPFLPLAPLFRPRRWPPSAITSASSDSPHRPTIKDSSTFREWDSLTAKFAGAANVPFFLLQLPQIVLNARNLLAGNKAALFAVPWLGMLTGLLGNLSLLSYFAKKKETEAILIQTLGVLSNYVVIAQLAIAEAMPLPQFGVTSAVVASGLVLNFLNYFGWLHDGIWQLWEDFITIGGVSVLPQVMWSTFVPYIPNSILPGLISGTVAVVAVIMARSGKLSNRGIKFVGSISGWTATLLFMWMPVAQMWTNYLHPDNIEGLSALTMLLAMIGNGLMIPRALFIRDLMWCTGSAWATFLLGWGNLACMYCFNSISRNFFFTSTLGLFLSLGMALWRDTVAYGYNSPLTSLRELVFGP
SIO_010081: LOC105053537
subclass of: SO_0000673
so part of: LOC105053537
location: join(2855897..2856148,2856231..2856386,2856484..2856774,2856859..2856948,2860858..2860959,2861050..2861168,2862531..2862593,2862692..2862753,2863544..2863626)
location: region:2855897-2863626:1
so has part: feature:2855897-2856148:1:exon
so has part: feature:2856231-2856386:1:exon
so has part: feature:2856484-2856774:1:exon
so has part: feature:2856859-2856948:1:exon
so has part: feature:2860858-2860959:1:exon
so has part: feature:2861050-2861168:1:exon
so has part: feature:2862531-2862593:1:exon
so has part: feature:2862692-2862753:1:exon
so has part: feature:2863544-2863626:1:exon

XP_010933046.1
type: Protein
SIO_000068: ncbiprotein

position:2863626:1
position: 2863626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2855897-2856148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2856231-2856386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2856484-2856774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2856859-2856948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2860858-2860959:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2861050-2861168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2862531-2862593:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2862692-2862753:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2863544-2863626:1:exon

LOC105053539
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2915212..2918154
location: region:2915212-2918154:1
so has part: feature:2915212-2918154:1:exon

105053539
type: Gene
SIO_000068: ncbigene

position:2915212:1
position: 2915212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2918154:1
position: 2918154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2915212-2918154:1:exon

LOC105053539
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053539
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105053539
subclass of: SO_0000673
so part of: LOC105053539
location: 2915212..2918154
location: region:2915212-2918154:1
so has part: feature:2915212-2918154:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2915212-2918154:1:exon

LOC105053540
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3040976..3044844
location: region:3040976-3044844:1
so has part: feature:3040976-3044844:1:exon
subclass of: SO_0000010

105053540
type: Gene
SIO_000068: ncbigene

position:3040976:1
position: 3040976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3044844:1
position: 3044844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3040976-3044844:1:exon

LOC105053540
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053540
product: pentatricopeptide repeat-containing protein At1g63330-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010934747.3
SIO_010081: LOC105053540
subclass of: SO_0000673
so part of: LOC105053540
location: join(3040976..3041477,3042728..3044844)
location: region:3040976-3044844:1
so has part: feature:3040976-3041477:1:exon
so has part: feature:3042728-3044844:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3040976-3041477:1:exon

position:3041477:1
position: 3041477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3042728-3044844:1:exon

position:3042728:1
position: 3042728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053540
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g63330-like
translation: MRPTRFLALSSASFSPTTSSSPSVEKTIGRTKPYLTDRALIERCRSNALTVEDALDLFDAAVAADPKPSIYAINLLLDAIAGMKHYPIVISLCNKLNVLSGIQPNIHTYSIVINSCRRMSSVNLGFGFLGGLLKRGFSPRTAIFNSLINGLGTERRVGEAAMLFDKMSLMGCEPNVVSCNALIKGLCNTGSTALALELHRKMSMMGDSCKTNIITFNTMIHHLCNEGHVSDACKLLVEMSRVGVKPDVRTYSSIIYGHSTLGHLKQAVGIFKEMMNHHLSPDVVTFNMLMNSLSKHEKTAEAHKLLDLMKERDEKPNVISYTILVQGYCREGHLADAREVFNSMLVKGPAPNSHTYSVLINGFVKNQKMDEAMELFNKMQKGGVKPDIITYSIILDGLCHLGKMEDVRGLLDEMMTQGIRPDVVTYTSIMCGLCRLGKWKEAHQLLYEMTEQQIHPNVVTFNALIDAFCKEGMIQEAHGLLEVMICRGIEPDVVTYTTLMDGYCMVGKLNDAVRICDLMVSKGHELDAFTYNILIDSYSKGGRIDDALSLFYAMPCKGVHHTVVTYNSMLAGLYRVGRVADAEKLREMMLAAGICPNLYTYNIVMDGLCKNQCIDEAMKLFRDTLSSNVNLDIVCFNTLIDGLVKAGRFEAAKNIFNTIHTKDLKPNVVTFNIMVHGLMKEGLFDEANNLLLHMEKSGCPPDSITFNAIIRGLLEKEEIERARDMIRKMKEKSFSFEVSTASKIFNLXSERQYHEYLKLLPDFS
SIO_010081: LOC105053540
subclass of: SO_0000673
so part of: LOC105053540
location: join(3041209..3041477,3042728..3044752)
location: region:3041209-3044752:1
so has part: feature:3041209-3041477:1:exon
so has part: feature:3042728-3044752:1:exon

XP_010933049.2
type: Protein
SIO_000068: ncbiprotein

position:3041209:1
position: 3041209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3044752:1
position: 3044752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3041209-3041477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3042728-3044752:1:exon

LOC105053541
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3050424..3051262)
location: region:3050424-3051262:-1
so has part: feature:3050424-3051262:-1:exon
subclass of: SO_0000010

105053541
type: Gene
SIO_000068: ncbigene

position:3050424:-1
position: 3050424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3051262:-1
position: 3051262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3050424-3051262:-1:exon

LOC105053541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053541
product: uncharacterized LOC105053541
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010934749.3
SIO_010081: LOC105053541
subclass of: SO_0000673
so part of: LOC105053541
location: complement(3050424..3051262)
location: region:3050424-3051262:-1
so has part: feature:3050424-3051262:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3050424-3051262:-1:exon

LOC105053541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053541
translation: MTGNHSRGSPSPPRRTCCFGCSSKRESNIKSNSSGVQGSRLEQGRWGSSEEILTDFSTFSLKEQQRNLKKALKEEEKASREAEKVVEWVKQASARIDVSTIDQLLSGDEKSK
SIO_010081: LOC105053541
subclass of: SO_0000673
so part of: LOC105053541
location: complement(3050652..3050990)
location: region:3050652-3050990:-1
so has part: feature:3050652-3050990:-1:exon

XP_010933051.1
type: Protein
SIO_000068: ncbiprotein

position:3050652:-1
position: 3050652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3050990:-1
position: 3050990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3050652-3050990:-1:exon

LOC105053542
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053542
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3133809..3138026
location: region:3133809-3138026:1
so has part: feature:3133809-3138026:1:exon
subclass of: SO_0000010

105053542
type: Gene
SIO_000068: ncbigene

position:3133809:1
position: 3133809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3138026:1
position: 3138026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3133809-3138026:1:exon

LOC105053542
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053542
product: trihelix transcription factor GT-3b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_010934750.3
SIO_010081: LOC105053542
subclass of: SO_0000673
so part of: LOC105053542
location: join(3133809..3134297,3137073..3138026)
location: region:3133809-3138026:1
so has part: feature:3133809-3134297:1:exon
so has part: feature:3137073-3138026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3133809-3134297:1:exon

position:3134297:1
position: 3134297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3137073-3138026:1:exon

position:3137073:1
position: 3137073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053542
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053542
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trihelix transcription factor GT-3b
translation: MMRGGSAEGMGMMGPGGPLRLNPAAEAVGTSGGAGGRGKEDKVPQWSPEETRDLIAIRGDLERDFSVSKRNKTMWELVATRMREKGYRRSPEQCKCKWKNLVNRYKGKETSDPETGKQCPFFEELHAVFTERARNMQRELLESESGASHSKKKLKKLGADKSSDELSEDDEDSDGERLTKTRKRKIDRGPQQRATDKSRATGSSIYDLLRDFLQQQQRMEVQWQEMMERRTQERLVFEQEWRQSMEKLEKERLMLEQAWWEREEQRRRREEMRAEKRDALLTTLLNKFLQEDL
SIO_010081: LOC105053542
subclass of: SO_0000673
so part of: LOC105053542
location: join(3133980..3134297,3137073..3137636)
location: region:3133980-3137636:1
so has part: feature:3133980-3134297:1:exon
so has part: feature:3137073-3137636:1:exon

XP_010933052.1
type: Protein
SIO_000068: ncbiprotein

position:3133980:1
position: 3133980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3137636:1
position: 3137636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3133980-3134297:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3137073-3137636:1:exon

LOC105053543
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3188733..3199661)
location: region:3188733-3199661:-1
so has part: feature:3188733-3199661:-1:exon
subclass of: SO_0000011

105053543
type: Gene
SIO_000068: ncbigene

position:3188733:-1
position: 3188733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3199661:-1
position: 3199661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3188733-3199661:-1:exon

LOC105053543
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51953
nc RNA class: lncRNA
gene: LOC105053543
product: uncharacterized LOC105053543, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_833473.3
SIO_010081: LOC105053543
subclass of: SO_0000673
so part of: LOC105053543
location: complement(join(3188733..3189131,3190106..3190171,3190258..3190334,3199391..3199661))
location: region:3188733-3199661:-1
so has part: feature:3199391-3199661:-1:exon
so has part: feature:3190258-3190334:-1:exon
so has part: feature:3190106-3190171:-1:exon
so has part: feature:3188733-3189131:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3199391-3199661:-1:exon

position:3199391:-1
position: 3199391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3190258-3190334:-1:exon

position:3190258:-1
position: 3190258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3190334:-1
position: 3190334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3190106-3190171:-1:exon

position:3190106:-1
position: 3190106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3190171:-1
position: 3190171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3188733-3189131:-1:exon

position:3189131:-1
position: 3189131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053543
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51953
nc RNA class: lncRNA
gene: LOC105053543
product: uncharacterized LOC105053543, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_002165699.2
SIO_010081: LOC105053543
subclass of: SO_0000673
so part of: LOC105053543
location: complement(join(3188733..3189131,3189971..3190171,3190258..3190334,3199391..3199661))
location: region:3188733-3199661:-1
so has part: feature:3199391-3199661:-1:exon
so has part: feature:3190258-3190334:-1:exon
so has part: feature:3189971-3190171:-1:exon
so has part: feature:3188733-3189131:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3199391-3199661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3190258-3190334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3189971-3190171:-1:exon

position:3189971:-1
position: 3189971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3188733-3189131:-1:exon

LOC105053544
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053544
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3202869..3249621)
location: region:3202869-3249621:-1
so has part: feature:3202869-3249621:-1:exon
subclass of: SO_0000010

105053544
type: Gene
SIO_000068: ncbigene

position:3202869:-1
position: 3202869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3249621:-1
position: 3249621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202869-3249621:-1:exon

LOC105053544
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053544
product: LRR receptor-like serine/threonine-protein kinase FEI 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_010934751.3
SIO_010081: LOC105053544
subclass of: SO_0000673
so part of: LOC105053544
location: complement(join(3202869..3203278,3207160..3207293,3209426..3209671,3212802..3213134,3213245..3213406,3213893..3213990,3214854..3214925,3215027..3215098,3215679..3215750,3220708..3220779,3220882..3220953,3239900..3240035,3240125..3240275,3249276..3249621))
location: region:3202869-3249621:-1
so has part: feature:3249276-3249621:-1:exon
so has part: feature:3240125-3240275:-1:exon
so has part: feature:3239900-3240035:-1:exon
so has part: feature:3220882-3220953:-1:exon
so has part: feature:3220708-3220779:-1:exon
so has part: feature:3215679-3215750:-1:exon
so has part: feature:3215027-3215098:-1:exon
so has part: feature:3214854-3214925:-1:exon
so has part: feature:3213893-3213990:-1:exon
so has part: feature:3213245-3213406:-1:exon
so has part: feature:3212802-3213134:-1:exon
so has part: feature:3209426-3209671:-1:exon
so has part: feature:3207160-3207293:-1:exon
so has part: feature:3202869-3203278:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3249276-3249621:-1:exon

position:3249276:-1
position: 3249276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3240125-3240275:-1:exon

position:3240125:-1
position: 3240125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3240275:-1
position: 3240275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3239900-3240035:-1:exon

position:3239900:-1
position: 3239900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3240035:-1
position: 3240035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3220882-3220953:-1:exon

position:3220882:-1
position: 3220882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3220953:-1
position: 3220953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3220708-3220779:-1:exon

position:3220708:-1
position: 3220708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3220779:-1
position: 3220779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3215679-3215750:-1:exon

position:3215679:-1
position: 3215679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3215750:-1
position: 3215750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3215027-3215098:-1:exon

position:3215027:-1
position: 3215027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3215098:-1
position: 3215098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3214854-3214925:-1:exon

position:3214854:-1
position: 3214854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3214925:-1
position: 3214925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3213893-3213990:-1:exon

position:3213893:-1
position: 3213893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3213990:-1
position: 3213990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3213245-3213406:-1:exon

position:3213245:-1
position: 3213245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3213406:-1
position: 3213406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3212802-3213134:-1:exon

position:3212802:-1
position: 3212802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3213134:-1
position: 3213134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3209426-3209671:-1:exon

position:3209426:-1
position: 3209426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3209671:-1
position: 3209671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3207160-3207293:-1:exon

position:3207160:-1
position: 3207160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3207293:-1
position: 3207293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3202869-3203278:-1:exon

position:3203278:-1
position: 3203278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053544
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053544
product: LRR receptor-like serine/threonine-protein kinase FEI 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019853763.2
SIO_010081: LOC105053544
subclass of: SO_0000673
so part of: LOC105053544
location: complement(join(3202869..3203278,3207160..3207293,3209426..3209671,3212802..3213134,3213245..3213406,3213893..3213990,3214854..3214925,3215027..3215098,3215679..3215750,3220708..3220779,3220882..3220953,3239900..3240035,3240125..3240275,3248918..3248988,3249276..3249617))
location: region:3202869-3249617:-1
so has part: feature:3249276-3249617:-1:exon
so has part: feature:3248918-3248988:-1:exon
so has part: feature:3240125-3240275:-1:exon
so has part: feature:3239900-3240035:-1:exon
so has part: feature:3220882-3220953:-1:exon
so has part: feature:3220708-3220779:-1:exon
so has part: feature:3215679-3215750:-1:exon
so has part: feature:3215027-3215098:-1:exon
so has part: feature:3214854-3214925:-1:exon
so has part: feature:3213893-3213990:-1:exon
so has part: feature:3213245-3213406:-1:exon
so has part: feature:3212802-3213134:-1:exon
so has part: feature:3209426-3209671:-1:exon
so has part: feature:3207160-3207293:-1:exon
so has part: feature:3202869-3203278:-1:exon

position:3249617:-1
position: 3249617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3249276-3249617:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3248918-3248988:-1:exon

position:3248918:-1
position: 3248918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3248988:-1
position: 3248988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3240125-3240275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3239900-3240035:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3220882-3220953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3220708-3220779:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3215679-3215750:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3215027-3215098:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3214854-3214925:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3213893-3213990:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3213245-3213406:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3212802-3213134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3209426-3209671:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3207160-3207293:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3202869-3203278:-1:exon

LOC105053544
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053544
product: LRR receptor-like serine/threonine-protein kinase FEI 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_010934752.3
SIO_010081: LOC105053544
subclass of: SO_0000673
so part of: LOC105053544
location: complement(join(3202869..3203278,3207160..3207293,3209426..3209671,3212802..3213134,3213245..3213406,3213893..3213990,3214854..3214925,3215027..3215098,3215679..3215750,3220708..3220779,3220882..3220953,3239900..3240035,3240125..3240275,3249470..3249616))
location: region:3202869-3249616:-1
so has part: feature:3249470-3249616:-1:exon
so has part: feature:3240125-3240275:-1:exon
so has part: feature:3239900-3240035:-1:exon
so has part: feature:3220882-3220953:-1:exon
so has part: feature:3220708-3220779:-1:exon
so has part: feature:3215679-3215750:-1:exon
so has part: feature:3215027-3215098:-1:exon
so has part: feature:3214854-3214925:-1:exon
so has part: feature:3213893-3213990:-1:exon
so has part: feature:3213245-3213406:-1:exon
so has part: feature:3212802-3213134:-1:exon
so has part: feature:3209426-3209671:-1:exon
so has part: feature:3207160-3207293:-1:exon
so has part: feature:3202869-3203278:-1:exon

position:3249616:-1
position: 3249616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3249470-3249616:-1:exon

position:3249470:-1
position: 3249470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3240125-3240275:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3239900-3240035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3220882-3220953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3220708-3220779:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3215679-3215750:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3215027-3215098:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3214854-3214925:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3213893-3213990:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3213245-3213406:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3212802-3213134:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3209426-3209671:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3207160-3207293:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3202869-3203278:-1:exon

LOC105053544
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053544
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LRR receptor-like serine/threonine-protein kinase FEI 1
translation: MGIFLMKCQRQHLPSIMLVLLMVVPISSAISSDGEVLLSFKTAISGSDGVLLQWRQEDPDPCDWKGVTCDNHTKRVIYLSLAYHKLIGSISPEISKLSYLKRLALHGNSLYGTMPPELGNCTQLQFLYLQGNYLSGFIPSEFGNLLELETLDISSNTLSGSIPPSLDKLTKLKSFNVSMNFLTGVIPSDGALIKFAETSFVGNRGLCGKQIGVICKDEVPPPSIDSQPPTSGNKGGKKNSTRIVISAVATVCALLFVALMCFWGCFLYKKFGKGDVRGLAVDVSGGASIVMFHGDLPYSSKDILRKLETLNDENIIGSGGFGTVYKLAMDDGNVFALKRIMKTNEGLDRFFDRELEILGSIKHRYLVNLRGYCNSPSSKLLIYDYLPGGSLDEVLHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDSSFIEKGLNIVGWLNFLVLENRQREIIDPHCEGVQIESLNALLSVAIQCVSSAPEERPTMHRVVQILESEVMTPCPSDFYDSNSD
SIO_010081: LOC105053544
subclass of: SO_0000673
so part of: LOC105053544
location: complement(join(3203060..3203278,3207160..3207293,3209426..3209671,3212802..3213134,3213245..3213406,3213893..3213990,3214854..3214925,3215027..3215098,3215679..3215750,3220708..3220779,3220882..3220953,3239900..3240035,3240125..3240224))
location: region:3203060-3240224:-1
so has part: feature:3240125-3240224:-1:exon
so has part: feature:3239900-3240035:-1:exon
so has part: feature:3220882-3220953:-1:exon
so has part: feature:3220708-3220779:-1:exon
so has part: feature:3215679-3215750:-1:exon
so has part: feature:3215027-3215098:-1:exon
so has part: feature:3214854-3214925:-1:exon
so has part: feature:3213893-3213990:-1:exon
so has part: feature:3213245-3213406:-1:exon
so has part: feature:3212802-3213134:-1:exon
so has part: feature:3209426-3209671:-1:exon
so has part: feature:3207160-3207293:-1:exon
so has part: feature:3203060-3203278:-1:exon

XP_019709322.1
type: Protein
SIO_000068: ncbiprotein

position:3203060:-1
position: 3203060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3240224:-1
position: 3240224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3240125-3240224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3239900-3240035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3220882-3220953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3220708-3220779:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3215679-3215750:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3215027-3215098:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3214854-3214925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3213893-3213990:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3213245-3213406:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3212802-3213134:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3209426-3209671:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3207160-3207293:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3203060-3203278:-1:exon

LOC105053544
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053544
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LRR receptor-like serine/threonine-protein kinase FEI 1
translation: MGIFLMKCQRQHLPSIMLVLLMVVPISSAISSDGEVLLSFKTAISGSDGVLLQWRQEDPDPCDWKGVTCDNHTKRVIYLSLAYHKLIGSISPEISKLSYLKRLALHGNSLYGTMPPELGNCTQLQFLYLQGNYLSGFIPSEFGNLLELETLDISSNTLSGSIPPSLDKLTKLKSFNVSMNFLTGVIPSDGALIKFAETSFVGNRGLCGKQIGVICKDEVPPPSIDSQPPTSGNKGGKKNSTRIVISAVATVCALLFVALMCFWGCFLYKKFGKGDVRGLAVDVSGGASIVMFHGDLPYSSKDILRKLETLNDENIIGSGGFGTVYKLAMDDGNVFALKRIMKTNEGLDRFFDRELEILGSIKHRYLVNLRGYCNSPSSKLLIYDYLPGGSLDEVLHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDSSFIEKGLNIVGWLNFLVLENRQREIIDPHCEGVQIESLNALLSVAIQCVSSAPEERPTMHRVVQILESEVMTPCPSDFYDSNSD
SIO_010081: LOC105053544
subclass of: SO_0000673
so part of: LOC105053544
location: complement(join(3203060..3203278,3207160..3207293,3209426..3209671,3212802..3213134,3213245..3213406,3213893..3213990,3214854..3214925,3215027..3215098,3215679..3215750,3220708..3220779,3220882..3220953,3239900..3240035,3240125..3240224))
location: region:3203060-3240224:-1
so has part: feature:3240125-3240224:-1:exon
so has part: feature:3239900-3240035:-1:exon
so has part: feature:3220882-3220953:-1:exon
so has part: feature:3220708-3220779:-1:exon
so has part: feature:3215679-3215750:-1:exon
so has part: feature:3215027-3215098:-1:exon
so has part: feature:3214854-3214925:-1:exon
so has part: feature:3213893-3213990:-1:exon
so has part: feature:3213245-3213406:-1:exon
so has part: feature:3212802-3213134:-1:exon
so has part: feature:3209426-3209671:-1:exon
so has part: feature:3207160-3207293:-1:exon
so has part: feature:3203060-3203278:-1:exon

XP_010933053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3240125-3240224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3239900-3240035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3220882-3220953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3220708-3220779:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3215679-3215750:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3215027-3215098:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3214854-3214925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3213893-3213990:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3213245-3213406:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3212802-3213134:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3209426-3209671:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3207160-3207293:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3203060-3203278:-1:exon

LOC105053544
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053544
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LRR receptor-like serine/threonine-protein kinase FEI 1
translation: MGIFLMKCQRQHLPSIMLVLLMVVPISSAISSDGEVLLSFKTAISGSDGVLLQWRQEDPDPCDWKGVTCDNHTKRVIYLSLAYHKLIGSISPEISKLSYLKRLALHGNSLYGTMPPELGNCTQLQFLYLQGNYLSGFIPSEFGNLLELETLDISSNTLSGSIPPSLDKLTKLKSFNVSMNFLTGVIPSDGALIKFAETSFVGNRGLCGKQIGVICKDEVPPPSIDSQPPTSGNKGGKKNSTRIVISAVATVCALLFVALMCFWGCFLYKKFGKGDVRGLAVDVSGGASIVMFHGDLPYSSKDILRKLETLNDENIIGSGGFGTVYKLAMDDGNVFALKRIMKTNEGLDRFFDRELEILGSIKHRYLVNLRGYCNSPSSKLLIYDYLPGGSLDEVLHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDSSFIEKGLNIVGWLNFLVLENRQREIIDPHCEGVQIESLNALLSVAIQCVSSAPEERPTMHRVVQILESEVMTPCPSDFYDSNSD
SIO_010081: LOC105053544
subclass of: SO_0000673
so part of: LOC105053544
location: complement(join(3203060..3203278,3207160..3207293,3209426..3209671,3212802..3213134,3213245..3213406,3213893..3213990,3214854..3214925,3215027..3215098,3215679..3215750,3220708..3220779,3220882..3220953,3239900..3240035,3240125..3240224))
location: region:3203060-3240224:-1
so has part: feature:3240125-3240224:-1:exon
so has part: feature:3239900-3240035:-1:exon
so has part: feature:3220882-3220953:-1:exon
so has part: feature:3220708-3220779:-1:exon
so has part: feature:3215679-3215750:-1:exon
so has part: feature:3215027-3215098:-1:exon
so has part: feature:3214854-3214925:-1:exon
so has part: feature:3213893-3213990:-1:exon
so has part: feature:3213245-3213406:-1:exon
so has part: feature:3212802-3213134:-1:exon
so has part: feature:3209426-3209671:-1:exon
so has part: feature:3207160-3207293:-1:exon
so has part: feature:3203060-3203278:-1:exon

XP_010933054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3240125-3240224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3239900-3240035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3220882-3220953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3220708-3220779:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3215679-3215750:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3215027-3215098:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3214854-3214925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3213893-3213990:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3213245-3213406:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3212802-3213134:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3209426-3209671:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3207160-3207293:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3203060-3203278:-1:exon

LOC105053545
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3256019..3272303)
location: region:3256019-3272303:-1
so has part: feature:3256019-3272303:-1:exon
subclass of: SO_0000010

105053545
type: Gene
SIO_000068: ncbigene

position:3256019:-1
position: 3256019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3272303:-1
position: 3272303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3256019-3272303:-1:exon

LOC105053545
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053545
product: SH3 domain-containing protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_010934754.3
SIO_010081: LOC105053545
subclass of: SO_0000673
so part of: LOC105053545
location: complement(join(3256019..3256491,3258435..3258509,3268045..3268359,3268544..3268606,3269933..3270133,3270217..3270318,3270784..3270932,3271010..3271079,3271230..3271346,3271854..3272303))
location: region:3256019-3272303:-1
so has part: feature:3271854-3272303:-1:exon
so has part: feature:3271230-3271346:-1:exon
so has part: feature:3271010-3271079:-1:exon
so has part: feature:3270784-3270932:-1:exon
so has part: feature:3270217-3270318:-1:exon
so has part: feature:3269933-3270133:-1:exon
so has part: feature:3268544-3268606:-1:exon
so has part: feature:3268045-3268359:-1:exon
so has part: feature:3258435-3258509:-1:exon
so has part: feature:3256019-3256491:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3271854-3272303:-1:exon

position:3271854:-1
position: 3271854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3271230-3271346:-1:exon

position:3271230:-1
position: 3271230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3271346:-1
position: 3271346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3271010-3271079:-1:exon

position:3271010:-1
position: 3271010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3271079:-1
position: 3271079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3270784-3270932:-1:exon

position:3270784:-1
position: 3270784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3270932:-1
position: 3270932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3270217-3270318:-1:exon

position:3270217:-1
position: 3270217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3270318:-1
position: 3270318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3269933-3270133:-1:exon

position:3269933:-1
position: 3269933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3270133:-1
position: 3270133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3268544-3268606:-1:exon

position:3268544:-1
position: 3268544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3268606:-1
position: 3268606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3268045-3268359:-1:exon

position:3268045:-1
position: 3268045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3268359:-1
position: 3268359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3258435-3258509:-1:exon

position:3258435:-1
position: 3258435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3258509:-1
position: 3258509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3256019-3256491:-1:exon

position:3256491:-1
position: 3256491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053545
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053545
product: SH3 domain-containing protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_019853506.2
SIO_010081: LOC105053545
subclass of: SO_0000673
so part of: LOC105053545
location: complement(join(3256019..3256491,3258435..3258509,3268544..3268606,3269933..3270133,3270217..3270318,3270784..3270932,3271010..3271079,3271230..3271346,3271854..3272302))
location: region:3256019-3272302:-1
so has part: feature:3271854-3272302:-1:exon
so has part: feature:3271230-3271346:-1:exon
so has part: feature:3271010-3271079:-1:exon
so has part: feature:3270784-3270932:-1:exon
so has part: feature:3270217-3270318:-1:exon
so has part: feature:3269933-3270133:-1:exon
so has part: feature:3268544-3268606:-1:exon
so has part: feature:3258435-3258509:-1:exon
so has part: feature:3256019-3256491:-1:exon

position:3272302:-1
position: 3272302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3271854-3272302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3271230-3271346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3271010-3271079:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3270784-3270932:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3270217-3270318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3269933-3270133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3268544-3268606:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3258435-3258509:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3256019-3256491:-1:exon

LOC105053545
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053545
product: SH3 domain-containing protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_010934753.3
SIO_010081: LOC105053545
subclass of: SO_0000673
so part of: LOC105053545
location: complement(join(3256019..3256491,3258435..3258509,3267642..3267875,3268045..3268359,3268544..3268606,3269933..3270133,3270217..3270318,3270784..3270932,3271010..3271079,3271230..3271346,3271854..3272289))
location: region:3256019-3272289:-1
so has part: feature:3271854-3272289:-1:exon
so has part: feature:3271230-3271346:-1:exon
so has part: feature:3271010-3271079:-1:exon
so has part: feature:3270784-3270932:-1:exon
so has part: feature:3270217-3270318:-1:exon
so has part: feature:3269933-3270133:-1:exon
so has part: feature:3268544-3268606:-1:exon
so has part: feature:3268045-3268359:-1:exon
so has part: feature:3267642-3267875:-1:exon
so has part: feature:3258435-3258509:-1:exon
so has part: feature:3256019-3256491:-1:exon

position:3272289:-1
position: 3272289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3271854-3272289:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3271230-3271346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3271010-3271079:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3270784-3270932:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3270217-3270318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3269933-3270133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3268544-3268606:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3268045-3268359:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3267642-3267875:-1:exon

position:3267642:-1
position: 3267642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3267875:-1
position: 3267875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3258435-3258509:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3256019-3256491:-1:exon

LOC105053545
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053545
product: SH3 domain-containing protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_029267154.1
SIO_010081: LOC105053545
subclass of: SO_0000673
so part of: LOC105053545
location: complement(join(3256019..3256491,3258435..3258509,3267642..3267875,3268045..3268359,3268544..3268606,3269933..3270129,3270217..3270318,3270784..3270932))
location: region:3256019-3270932:-1
so has part: feature:3270784-3270932:-1:exon
so has part: feature:3270217-3270318:-1:exon
so has part: feature:3269933-3270129:-1:exon
so has part: feature:3268544-3268606:-1:exon
so has part: feature:3268045-3268359:-1:exon
so has part: feature:3267642-3267875:-1:exon
so has part: feature:3258435-3258509:-1:exon
so has part: feature:3256019-3256491:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3270784-3270932:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3270217-3270318:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3269933-3270129:-1:exon

position:3270129:-1
position: 3270129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3268544-3268606:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3268045-3268359:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3267642-3267875:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3258435-3258509:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3256019-3256491:-1:exon

LOC105053545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain-containing protein 2 isoform X3
translation: MMEAIRKQASRLREQVAKQQQAVLKQFSGRFGHDSGLVDEAELQCHQKLQMLYTSTRAAKHLQRDIVRGVEAFVAISLKQMEIVKRLAENCCKYGNENQSSGFALAMASLDFGTSHILMEKERENLLNTLGDQVFEPLRAMIIGAPLEDARLLTYRYERIRQDVESQTAEAIRRQLKSREVGASADSAAKLQSAESKLSELKATLSALGREATAAMMAVEAQQQQITFQQLLAMVDAERAYHQSVANILDKLRADVIHPFDAQANGELSLSVGDYVVVRQVVSNGWSEGECKGKAGWFPSAYIEPRDKAPASKVIEPSMLS
SIO_010081: LOC105053545
subclass of: SO_0000673
so part of: LOC105053545
location: complement(join(3256366..3256491,3258435..3258509,3268544..3268606,3269933..3270133,3270217..3270318,3270784..3270932,3271010..3271079,3271230..3271346,3271854..3271916))
location: region:3256366-3271916:-1
so has part: feature:3271854-3271916:-1:exon
so has part: feature:3271230-3271346:-1:exon
so has part: feature:3271010-3271079:-1:exon
so has part: feature:3270784-3270932:-1:exon
so has part: feature:3270217-3270318:-1:exon
so has part: feature:3269933-3270133:-1:exon
so has part: feature:3268544-3268606:-1:exon
so has part: feature:3258435-3258509:-1:exon
so has part: feature:3256366-3256491:-1:exon

XP_019709065.1
type: Protein
SIO_000068: ncbiprotein

position:3256366:-1
position: 3256366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3271916:-1
position: 3271916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3271854-3271916:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3271230-3271346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3271010-3271079:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3270784-3270932:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3270217-3270318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3269933-3270133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3268544-3268606:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3258435-3258509:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3256366-3256491:-1:exon

LOC105053545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain-containing protein 2 isoform X2
translation: MMEAIRKQASRLREQVAKQQQAVLKQFSGRFGHDSGLVDEAELQCHQKLQMLYTSTRAAKHLQRDIVRGVEAFVAISLKQMEIVKRLAENCCKYGNENQSSGFALAMASLDFGTSHILMEKERENLLNTLGDQVFEPLRAMIIGAPLEDARLLTYRYERIRQDVESQTAEAIRRQLKSREVGASADSAAKLQSAESKLSELKATLSALGREATAAMMAVEAQQQQITFQQLLAMVDAERAYHQSVANILDKLRADMVQAKQNSESMLQSKTTKTNMHSQTVNEDPKSSQSAGLLQSTETETLMHSPTRNEDPKSSQSVDLLQSTETETNVHSQTRNEDPKSSQSADIPGNGQTTTYVVAEVIHPFDAQANGELSLSVGDYVVVRQVVSNGWSEGECKGKAGWFPSAYIEPRDKAPASKVIEPSMLS
SIO_010081: LOC105053545
subclass of: SO_0000673
so part of: LOC105053545
location: complement(join(3256366..3256491,3258435..3258509,3268045..3268359,3268544..3268606,3269933..3270133,3270217..3270318,3270784..3270932,3271010..3271079,3271230..3271346,3271854..3271916))
location: region:3256366-3271916:-1
so has part: feature:3271854-3271916:-1:exon
so has part: feature:3271230-3271346:-1:exon
so has part: feature:3271010-3271079:-1:exon
so has part: feature:3270784-3270932:-1:exon
so has part: feature:3270217-3270318:-1:exon
so has part: feature:3269933-3270133:-1:exon
so has part: feature:3268544-3268606:-1:exon
so has part: feature:3268045-3268359:-1:exon
so has part: feature:3258435-3258509:-1:exon
so has part: feature:3256366-3256491:-1:exon

XP_010933056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3271854-3271916:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3271230-3271346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3271010-3271079:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3270784-3270932:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3270217-3270318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3269933-3270133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3268544-3268606:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3268045-3268359:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3258435-3258509:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3256366-3256491:-1:exon

LOC105053545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain-containing protein 2 isoform X1
translation: MMEAIRKQASRLREQVAKQQQAVLKQFSGRFGHDSGLVDEAELQCHQKLQMLYTSTRAAKHLQRDIVRGVEAFVAISLKQMEIVKRLAENCCKYGNENQSSGFALAMASLDFGTSHILMEKERENLLNTLGDQVFEPLRAMIIGAPLEDARLLTYRYERIRQDVESQTAEAIRRQLKSREVGASADSAAKLQSAESKLSELKATLSALGREATAAMMAVEAQQQQITFQQLLAMVDAERAYHQSVANILDKLRADMVQAKQNSESMLQSKTTKTNMHSQTVNEDPKSSQSAGLLQSTETETLMHSPTRNEDPKSSQSVDLLQSTETETNVHSQTRNEDPKSSQSADIPGNGQTTTYVVAEMVKEKQHNESTLQSKTTKTKMHSQIVNEDPKSSQSADLLQSTENETNVYSQTRNEDPKSNRSADIPANGRTTTYFVAEVIHPFDAQANGELSLSVGDYVVVRQVVSNGWSEGECKGKAGWFPSAYIEPRDKAPASKVIEPSMLS
SIO_010081: LOC105053545
subclass of: SO_0000673
so part of: LOC105053545
location: complement(join(3256366..3256491,3258435..3258509,3267642..3267875,3268045..3268359,3268544..3268606,3269933..3270133,3270217..3270318,3270784..3270932,3271010..3271079,3271230..3271346,3271854..3271916))
location: region:3256366-3271916:-1
so has part: feature:3271854-3271916:-1:exon
so has part: feature:3271230-3271346:-1:exon
so has part: feature:3271010-3271079:-1:exon
so has part: feature:3270784-3270932:-1:exon
so has part: feature:3270217-3270318:-1:exon
so has part: feature:3269933-3270133:-1:exon
so has part: feature:3268544-3268606:-1:exon
so has part: feature:3268045-3268359:-1:exon
so has part: feature:3267642-3267875:-1:exon
so has part: feature:3258435-3258509:-1:exon
so has part: feature:3256366-3256491:-1:exon

XP_010933055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3271854-3271916:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3271230-3271346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3271010-3271079:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3270784-3270932:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3270217-3270318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3269933-3270133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3268544-3268606:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3268045-3268359:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3267642-3267875:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3258435-3258509:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3256366-3256491:-1:exon

LOC105053545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain-containing protein 1 isoform X4
translation: MMAVEAQQQQITFQQLLAMVDAERAYHQSVANILDKLRADMVQAKQNSESMLQSKTTKTNMHSQTVNEDPKSSQSAGLLQSTETETLMHSPTRNEDPKSSQSVDLLQSTETETNVHSQTRNEDPKSSQSADIPGNGQTTTYVVAEMVKEKQHNESTLQSKTTKTKMHSQIVNEDPKSSQSADLLQSTENETNVYSQTRNEDPKSNRSADIPANGRTTTYFVAEVIHPFDAQANGELSLSVGDYVVVRQVVSNGWSEGECKGKAGWFPSAYIEPRDKAPASKVIEPSMLS
SIO_010081: LOC105053545
subclass of: SO_0000673
so part of: LOC105053545
location: complement(join(3256366..3256491,3258435..3258509,3267642..3267875,3268045..3268359,3268544..3268606,3269933..3269989))
location: region:3256366-3269989:-1
so has part: feature:3269933-3269989:-1:exon
so has part: feature:3268544-3268606:-1:exon
so has part: feature:3268045-3268359:-1:exon
so has part: feature:3267642-3267875:-1:exon
so has part: feature:3258435-3258509:-1:exon
so has part: feature:3256366-3256491:-1:exon

XP_029122987.1
type: Protein
SIO_000068: ncbiprotein

position:3269989:-1
position: 3269989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3269933-3269989:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3268544-3268606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3268045-3268359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3267642-3267875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3258435-3258509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3256366-3256491:-1:exon

LOC105053546
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053546
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3351095..3356029
location: region:3351095-3356029:1
so has part: feature:3351095-3356029:1:exon
subclass of: SO_0000010

105053546
type: Gene
SIO_000068: ncbigene

position:3351095:1
position: 3351095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3356029:1
position: 3356029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3351095-3356029:1:exon

LOC105053546
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053546
product: spermidine/putrescine-binding periplasmic protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_010934755.3
SIO_010081: LOC105053546
subclass of: SO_0000673
so part of: LOC105053546
location: join(3351095..3351525,3351949..3352106,3352696..3352944,3354078..3354212,3354519..3354701,3355018..3355179,3355458..3356029)
location: region:3351095-3356029:1
so has part: feature:3351095-3351525:1:exon
so has part: feature:3351949-3352106:1:exon
so has part: feature:3352696-3352944:1:exon
so has part: feature:3354078-3354212:1:exon
so has part: feature:3354519-3354701:1:exon
so has part: feature:3355018-3355179:1:exon
so has part: feature:3355458-3356029:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3351095-3351525:1:exon

position:3351525:1
position: 3351525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3351949-3352106:1:exon

position:3351949:1
position: 3351949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3352106:1
position: 3352106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3352696-3352944:1:exon

position:3352696:1
position: 3352696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3352944:1
position: 3352944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3354078-3354212:1:exon

position:3354078:1
position: 3354078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3354212:1
position: 3354212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3354519-3354701:1:exon

position:3354519:1
position: 3354519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3354701:1
position: 3354701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3355018-3355179:1:exon

position:3355018:1
position: 3355018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3355179:1
position: 3355179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3355458-3356029:1:exon

position:3355458:1
position: 3355458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053546
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053546
product: spermidine/putrescine-binding periplasmic protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_010934757.3
SIO_010081: LOC105053546
subclass of: SO_0000673
so part of: LOC105053546
location: join(3351095..3351525,3351949..3352106,3352696..3352944,3354519..3354701,3355018..3355179,3355458..3356029)
location: region:3351095-3356029:1
so has part: feature:3351095-3351525:1:exon
so has part: feature:3351949-3352106:1:exon
so has part: feature:3352696-3352944:1:exon
so has part: feature:3354519-3354701:1:exon
so has part: feature:3355018-3355179:1:exon
so has part: feature:3355458-3356029:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3351095-3351525:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3351949-3352106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3352696-3352944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3354519-3354701:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3355018-3355179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3355458-3356029:1:exon

LOC105053546
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053546
product: spermidine/putrescine-binding periplasmic protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_010934756.3
SIO_010081: LOC105053546
subclass of: SO_0000673
so part of: LOC105053546
location: join(3351095..3351525,3351961..3352106,3352696..3352944,3354078..3354212,3354519..3354701,3355018..3355179,3355458..3356029)
location: region:3351095-3356029:1
so has part: feature:3351095-3351525:1:exon
so has part: feature:3351961-3352106:1:exon
so has part: feature:3352696-3352944:1:exon
so has part: feature:3354078-3354212:1:exon
so has part: feature:3354519-3354701:1:exon
so has part: feature:3355018-3355179:1:exon
so has part: feature:3355458-3356029:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3351095-3351525:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3351961-3352106:1:exon

position:3351961:1
position: 3351961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3352696-3352944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3354078-3354212:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3354519-3354701:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3355018-3355179:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3355458-3356029:1:exon

LOC105053546
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053546
product: spermidine/putrescine-binding periplasmic protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_029267156.1
SIO_010081: LOC105053546
subclass of: SO_0000673
so part of: LOC105053546
location: join(3351095..3351525,3351961..3352106,3352696..3352944,3354519..3354701,3355018..3355179,3355458..3356029)
location: region:3351095-3356029:1
so has part: feature:3351095-3351525:1:exon
so has part: feature:3351961-3352106:1:exon
so has part: feature:3352696-3352944:1:exon
so has part: feature:3354519-3354701:1:exon
so has part: feature:3355018-3355179:1:exon
so has part: feature:3355458-3356029:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3351095-3351525:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3351961-3352106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3352696-3352944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3354519-3354701:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3355018-3355179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3355458-3356029:1:exon

LOC105053546
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053546
product: spermidine/putrescine-binding periplasmic protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_010934759.3
SIO_010081: LOC105053546
subclass of: SO_0000673
so part of: LOC105053546
location: join(3351095..3351525,3351949..3352106,3352696..3352944,3354078..3354212,3354519..3354701,3355018..3355179,3355436..3355791)
location: region:3351095-3355791:1
so has part: feature:3351095-3351525:1:exon
so has part: feature:3351949-3352106:1:exon
so has part: feature:3352696-3352944:1:exon
so has part: feature:3354078-3354212:1:exon
so has part: feature:3354519-3354701:1:exon
so has part: feature:3355018-3355179:1:exon
so has part: feature:3355436-3355791:1:exon

position:3355791:1
position: 3355791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3351095-3351525:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3351949-3352106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3352696-3352944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3354078-3354212:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3354519-3354701:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3355018-3355179:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3355436-3355791:1:exon

position:3355436:1
position: 3355436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053546
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053546
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053546 isoform X1
translation: MAVLPFPSSPHPLLHLSNPKPRSPSLWRRSPIVASLNQIPPSSSSTAFPRVSGRHTTRASSPSPFPSLVETLRRHFALLVHLAASAVFLVGFGARACALGSAPILPPTATTASGSHAVESSDKTAERMEDEELRAALESWKSKTYALTVPLRIVALRGSIPPSWIKEFIQAQGRRLKLITEFRGSLESIFSDLSSSLEKGSLQPKSAMAADIVSVGDSWLSHAISGGLIEPMKDVDREHWFNILGNKWKVYLCRNNKGDLDSNGYVWGVPYRWGTMVIAYKKNKFRKHNLRPIEDWGDLWRPELAGKISMVDSPREVVGAVLKHMGASYNTKDIESQVIGGREAVLHNLTMLQRQVRLFDSVHYLKAFGAGEVWVAVGWSSDVIPSAKRLSNVAVVVPKSGTSLWADLWAIPYATRFATDQIGGRVRSPSPLVNQWLEFCLQTARGLPFQQEVVPGASPFTLDHPPLEGSQEPGKRRPKLDTNLIEGIPPLDILAKCEFLEPLSEKALEDHQWLISNMQKQGADWIRSMLYHVRSIFNPQARC
SIO_010081: LOC105053546
subclass of: SO_0000673
so part of: LOC105053546
location: join(3351186..3351525,3351949..3352106,3352696..3352944,3354078..3354212,3354519..3354701,3355018..3355179,3355458..3355862)
location: region:3351186-3355862:1
so has part: feature:3351186-3351525:1:exon
so has part: feature:3351949-3352106:1:exon
so has part: feature:3352696-3352944:1:exon
so has part: feature:3354078-3354212:1:exon
so has part: feature:3354519-3354701:1:exon
so has part: feature:3355018-3355179:1:exon
so has part: feature:3355458-3355862:1:exon

XP_010933057.1
type: Protein
SIO_000068: ncbiprotein

position:3351186:1
position: 3351186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3355862:1
position: 3355862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3351186-3351525:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3351949-3352106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3352696-3352944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3354078-3354212:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3354519-3354701:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3355018-3355179:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3355458-3355862:1:exon

LOC105053546
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053546
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053546 isoform X3
translation: MAVLPFPSSPHPLLHLSNPKPRSPSLWRRSPIVASLNQIPPSSSSTAFPRVSGRHTTRASSPSPFPSLVETLRRHFALLVHLAASAVFLVGFGARACALGSAPILPPTATTASGSHAVESSDKTAERMEDEELRAALESWKSKTYALTVPLRIVALRGSIPPSWIKEFIQAQGRRLKLITEFRGSLESIFSDLSSSLEKGSLQPKSAMAADIVSVGDSWLSHAISGGLIEPMKDVDREHWFNILGNKWKDWGDLWRPELAGKISMVDSPREVVGAVLKHMGASYNTKDIESQVIGGREAVLHNLTMLQRQVRLFDSVHYLKAFGAGEVWVAVGWSSDVIPSAKRLSNVAVVVPKSGTSLWADLWAIPYATRFATDQIGGRVRSPSPLVNQWLEFCLQTARGLPFQQEVVPGASPFTLDHPPLEGSQEPGKRRPKLDTNLIEGIPPLDILAKCEFLEPLSEKALEDHQWLISNMQKQGADWIRSMLYHVRSIFNPQARC
SIO_010081: LOC105053546
subclass of: SO_0000673
so part of: LOC105053546
location: join(3351186..3351525,3351949..3352106,3352696..3352944,3354519..3354701,3355018..3355179,3355458..3355862)
location: region:3351186-3355862:1
so has part: feature:3351186-3351525:1:exon
so has part: feature:3351949-3352106:1:exon
so has part: feature:3352696-3352944:1:exon
so has part: feature:3354519-3354701:1:exon
so has part: feature:3355018-3355179:1:exon
so has part: feature:3355458-3355862:1:exon

XP_010933059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3351186-3351525:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3351949-3352106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3352696-3352944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3354519-3354701:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3355018-3355179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3355458-3355862:1:exon

LOC105053546
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053546
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053546 isoform X2
translation: MAVLPFPSSPHPLLHLSNPKPRSPSLWRRSPIVASLNQIPPSSSSTAFPRVSGRHTTRASSPSPFPSLVETLRRHFALLVHLAASAVFLVGFGARACALGSAPILPPTATTASVESSDKTAERMEDEELRAALESWKSKTYALTVPLRIVALRGSIPPSWIKEFIQAQGRRLKLITEFRGSLESIFSDLSSSLEKGSLQPKSAMAADIVSVGDSWLSHAISGGLIEPMKDVDREHWFNILGNKWKVYLCRNNKGDLDSNGYVWGVPYRWGTMVIAYKKNKFRKHNLRPIEDWGDLWRPELAGKISMVDSPREVVGAVLKHMGASYNTKDIESQVIGGREAVLHNLTMLQRQVRLFDSVHYLKAFGAGEVWVAVGWSSDVIPSAKRLSNVAVVVPKSGTSLWADLWAIPYATRFATDQIGGRVRSPSPLVNQWLEFCLQTARGLPFQQEVVPGASPFTLDHPPLEGSQEPGKRRPKLDTNLIEGIPPLDILAKCEFLEPLSEKALEDHQWLISNMQKQGADWIRSMLYHVRSIFNPQARC
SIO_010081: LOC105053546
subclass of: SO_0000673
so part of: LOC105053546
location: join(3351186..3351525,3351961..3352106,3352696..3352944,3354078..3354212,3354519..3354701,3355018..3355179,3355458..3355862)
location: region:3351186-3355862:1
so has part: feature:3351186-3351525:1:exon
so has part: feature:3351961-3352106:1:exon
so has part: feature:3352696-3352944:1:exon
so has part: feature:3354078-3354212:1:exon
so has part: feature:3354519-3354701:1:exon
so has part: feature:3355018-3355179:1:exon
so has part: feature:3355458-3355862:1:exon

XP_010933058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3351186-3351525:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3351961-3352106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3352696-3352944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3354078-3354212:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3354519-3354701:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3355018-3355179:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3355458-3355862:1:exon

LOC105053546
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053546
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053546 isoform X4
translation: MAVLPFPSSPHPLLHLSNPKPRSPSLWRRSPIVASLNQIPPSSSSTAFPRVSGRHTTRASSPSPFPSLVETLRRHFALLVHLAASAVFLVGFGARACALGSAPILPPTATTASVESSDKTAERMEDEELRAALESWKSKTYALTVPLRIVALRGSIPPSWIKEFIQAQGRRLKLITEFRGSLESIFSDLSSSLEKGSLQPKSAMAADIVSVGDSWLSHAISGGLIEPMKDVDREHWFNILGNKWKDWGDLWRPELAGKISMVDSPREVVGAVLKHMGASYNTKDIESQVIGGREAVLHNLTMLQRQVRLFDSVHYLKAFGAGEVWVAVGWSSDVIPSAKRLSNVAVVVPKSGTSLWADLWAIPYATRFATDQIGGRVRSPSPLVNQWLEFCLQTARGLPFQQEVVPGASPFTLDHPPLEGSQEPGKRRPKLDTNLIEGIPPLDILAKCEFLEPLSEKALEDHQWLISNMQKQGADWIRSMLYHVRSIFNPQARC
SIO_010081: LOC105053546
subclass of: SO_0000673
so part of: LOC105053546
location: join(3351186..3351525,3351961..3352106,3352696..3352944,3354519..3354701,3355018..3355179,3355458..3355862)
location: region:3351186-3355862:1
so has part: feature:3351186-3351525:1:exon
so has part: feature:3351961-3352106:1:exon
so has part: feature:3352696-3352944:1:exon
so has part: feature:3354519-3354701:1:exon
so has part: feature:3355018-3355179:1:exon
so has part: feature:3355458-3355862:1:exon

XP_029122989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3351186-3351525:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3351961-3352106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3352696-3352944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3354519-3354701:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3355018-3355179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3355458-3355862:1:exon

LOC105053546
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053546
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053546 isoform X5
translation: MAVLPFPSSPHPLLHLSNPKPRSPSLWRRSPIVASLNQIPPSSSSTAFPRVSGRHTTRASSPSPFPSLVETLRRHFALLVHLAASAVFLVGFGARACALGSAPILPPTATTASGSHAVESSDKTAERMEDEELRAALESWKSKTYALTVPLRIVALRGSIPPSWIKEFIQAQGRRLKLITEFRGSLESIFSDLSSSLEKGSLQPKSAMAADIVSVGDSWLSHAISGGLIEPMKDVDREHWFNILGNKWKVYLCRNNKGDLDSNGYVWGVPYRWGTMVIAYKKNKFRKHNLRPIEDWGDLWRPELAGKISMVDSPREVVGAVLKHMGASYNTKDIESQVIGGREAVLHNLTMLQRQVRLFDSVHYLKAFGAGEVWVAVGWSSDVIPSAKRLSNVAVVVPKSGTSLWADLWSNI
SIO_010081: LOC105053546
subclass of: SO_0000673
so part of: LOC105053546
location: join(3351186..3351525,3351949..3352106,3352696..3352944,3354078..3354212,3354519..3354701,3355018..3355179,3355436..3355447)
location: region:3351186-3355447:1
so has part: feature:3351186-3351525:1:exon
so has part: feature:3351949-3352106:1:exon
so has part: feature:3352696-3352944:1:exon
so has part: feature:3354078-3354212:1:exon
so has part: feature:3354519-3354701:1:exon
so has part: feature:3355018-3355179:1:exon
so has part: feature:3355436-3355447:1:exon

XP_010933061.1
type: Protein
SIO_000068: ncbiprotein

position:3355447:1
position: 3355447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3351186-3351525:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3351949-3352106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3352696-3352944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3354078-3354212:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3354519-3354701:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3355018-3355179:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3355436-3355447:1:exon

LOC105053548
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053548
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3369901..3373511)
location: region:3369901-3373511:-1
so has part: feature:3369901-3373511:-1:exon
subclass of: SO_0000010

105053548
type: Gene
SIO_000068: ncbigene

position:3369901:-1
position: 3369901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3373511:-1
position: 3373511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3369901-3373511:-1:exon

LOC105053548
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053548
product: pentatricopeptide repeat-containing protein OTP51, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_010934761.2
SIO_010081: LOC105053548
subclass of: SO_0000673
so part of: LOC105053548
location: complement(join(3369901..3372095,3372776..3373511))
location: region:3369901-3373511:-1
so has part: feature:3372776-3373511:-1:exon
so has part: feature:3369901-3372095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3372776-3373511:-1:exon

position:3372776:-1
position: 3372776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3369901-3372095:-1:exon

position:3372095:-1
position: 3372095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053548
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053548
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein OTP51, chloroplastic
translation: MREAMLIPLSPELCSTAALPAGLSLRRRYHPTASTSLAALRHPLPLPSSPCRLHCGVLISNAPSPLPLRRRLPSTKRASLVAVEPSQQEEEEEEGDEGEAESEDAGRPLVQLLSDGAAERDMRSLPSPPVEVRELEEFPEQWRRAKIAWLCKELPSHKNSTYVRILNAQRKWITQEDATYIALHFMRTRDNEASFRVYKWMAQRHWFRFDFALATKLADYLGKDRKFTKCREMFDAIINQGRIPSESTFHILTVAYLSAPVEGCLEEACIIYNKMIQLGGYKPRLSLHNSLFRALVRKTGGSSKHYLKQAEFIYHNLVTSDLEIHKDIYAGLIWLHSYQDVIDRERISALREEMRHAKIEESKDVLLSIMRACSKEGDVEETERTWLKLLESGCSLPSQAFVYRMDLYARANEPMKSLEIYKGMKEQKIPVSVAAYHKIIEVMSNAREVDIAEELIDDFIESGMKPLMPAYLNLMHMYFHLGMHDKLELTFSRCLTRCSPNRTIYNIYLKSLVTIGNLEKADEIFNEMHENGTIGTNARSCNTILRGFLALEDHVKVAKIHDIMRQKKYDVEPQSLEKLHYVLSQNRKVVRRTVSMKLDQEQREILIGLLLGGVRMESDVERRNHAIHFEFDESSNVHSALRAHIHERFYEWLTPSSRLAEDDHEIPYRFSTILHSYFGFFADQFWLKGRPMIPKLIHRWLSARVLAYWYMYGGFRISSGDILLKMKGGNREDVERIVKALQAKSLACRVKRKGKVFWIGLQGSNADAFWKLTESYVLVSVKNLLAPGDGLTGNGREEGQFNDSQTESEPDEQGSV
SIO_010081: LOC105053548
subclass of: SO_0000673
so part of: LOC105053548
location: complement(join(3370233..3372095,3372776..3373363))
location: region:3370233-3373363:-1
so has part: feature:3372776-3373363:-1:exon
so has part: feature:3370233-3372095:-1:exon

XP_010933063.1
type: Protein
SIO_000068: ncbiprotein

position:3370233:-1
position: 3370233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3373363:-1
position: 3373363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3372776-3373363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3370233-3372095:-1:exon

LOC105053549
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3396004..3411735)
location: region:3396004-3411735:-1
so has part: feature:3396004-3411735:-1:exon
subclass of: SO_0000010

105053549
type: Gene
SIO_000068: ncbigene

position:3396004:-1
position: 3396004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3411735:-1
position: 3411735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3396004-3411735:-1:exon

LOC105053549
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053549
product: thylakoid lumenal 29 kDa protein, chloroplastic, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_029267157.1
SIO_010081: LOC105053549
subclass of: SO_0000673
so part of: LOC105053549
location: complement(join(3396004..3396477,3397478..3397612,3398246..3398383,3399290..3399396,3400744..3400874,3401006..3401046,3401149..3401214,3401357..3401391,3401487..3401547,3411173..3411280,3411546..3411735))
location: region:3396004-3411735:-1
so has part: feature:3411546-3411735:-1:exon
so has part: feature:3411173-3411280:-1:exon
so has part: feature:3401487-3401547:-1:exon
so has part: feature:3401357-3401391:-1:exon
so has part: feature:3401149-3401214:-1:exon
so has part: feature:3401006-3401046:-1:exon
so has part: feature:3400744-3400874:-1:exon
so has part: feature:3399290-3399396:-1:exon
so has part: feature:3398246-3398383:-1:exon
so has part: feature:3397478-3397612:-1:exon
so has part: feature:3396004-3396477:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3411546-3411735:-1:exon

position:3411546:-1
position: 3411546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3411173-3411280:-1:exon

position:3411173:-1
position: 3411173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3411280:-1
position: 3411280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3401487-3401547:-1:exon

position:3401487:-1
position: 3401487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3401547:-1
position: 3401547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3401357-3401391:-1:exon

position:3401357:-1
position: 3401357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3401391:-1
position: 3401391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3401149-3401214:-1:exon

position:3401149:-1
position: 3401149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3401214:-1
position: 3401214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3401006-3401046:-1:exon

position:3401006:-1
position: 3401006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3401046:-1
position: 3401046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3400744-3400874:-1:exon

position:3400744:-1
position: 3400744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3400874:-1
position: 3400874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3399290-3399396:-1:exon

position:3399290:-1
position: 3399290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3399396:-1
position: 3399396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3398246-3398383:-1:exon

position:3398246:-1
position: 3398246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3398383:-1
position: 3398383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3397478-3397612:-1:exon

position:3397478:-1
position: 3397478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3397612:-1
position: 3397612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3396004-3396477:-1:exon

position:3396477:-1
position: 3396477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053549
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053549
product: thylakoid lumenal 29 kDa protein, chloroplastic, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_010934762.3
SIO_010081: LOC105053549
subclass of: SO_0000673
so part of: LOC105053549
location: complement(join(3396004..3396477,3397478..3397612,3398246..3398383,3399290..3399396,3400744..3400874,3401006..3401046,3401149..3401214,3401357..3401391,3401463..3401547,3411173..3411280,3411546..3411735))
location: region:3396004-3411735:-1
so has part: feature:3411546-3411735:-1:exon
so has part: feature:3411173-3411280:-1:exon
so has part: feature:3401463-3401547:-1:exon
so has part: feature:3401357-3401391:-1:exon
so has part: feature:3401149-3401214:-1:exon
so has part: feature:3401006-3401046:-1:exon
so has part: feature:3400744-3400874:-1:exon
so has part: feature:3399290-3399396:-1:exon
so has part: feature:3398246-3398383:-1:exon
so has part: feature:3397478-3397612:-1:exon
so has part: feature:3396004-3396477:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3411546-3411735:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3411173-3411280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3401463-3401547:-1:exon

position:3401463:-1
position: 3401463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3401357-3401391:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3401149-3401214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3401006-3401046:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3400744-3400874:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3399290-3399396:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3398246-3398383:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3397478-3397612:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3396004-3396477:-1:exon

LOC105053549
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053549
product: thylakoid lumenal 29 kDa protein, chloroplastic, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019853610.2
SIO_010081: LOC105053549
subclass of: SO_0000673
so part of: LOC105053549
location: complement(join(3396004..3396477,3397478..3397612,3398246..3398383,3399290..3399396,3400744..3400874,3401006..3401046,3401149..3401214,3401357..3401391,3401463..3401565,3411173..3411280,3411546..3411585))
location: region:3396004-3411585:-1
so has part: feature:3411546-3411585:-1:exon
so has part: feature:3411173-3411280:-1:exon
so has part: feature:3401463-3401565:-1:exon
so has part: feature:3401357-3401391:-1:exon
so has part: feature:3401149-3401214:-1:exon
so has part: feature:3401006-3401046:-1:exon
so has part: feature:3400744-3400874:-1:exon
so has part: feature:3399290-3399396:-1:exon
so has part: feature:3398246-3398383:-1:exon
so has part: feature:3397478-3397612:-1:exon
so has part: feature:3396004-3396477:-1:exon

position:3411585:-1
position: 3411585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3411546-3411585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3411173-3411280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3401463-3401565:-1:exon

position:3401565:-1
position: 3401565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3401357-3401391:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3401149-3401214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3401006-3401046:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3400744-3400874:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3399290-3399396:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3398246-3398383:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3397478-3397612:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3396004-3396477:-1:exon

LOC105053549
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thylakoid lumenal 29 kDa protein, chloroplastic isoform X2
translation: MAGVSFLSTLPSLLPHSPQPSLLLAAPKHTNGGICCQHKVDDSGVPDGQHRSNRRDVLSCFGAVIGVEMIGRSGSFTRMANAADLIQPNIKDTLSAAVKGYPDLVPSILTLALNDAMTYDKATKSGGPNGSISLSPEISRPENSGLSAALNLLVEAKRDIDSYSKGGPISFADLIQFAAQAAVKKTFLDSAIRKCGGNEEKGRLLYTAYGSNGQWGLFDKQFGRNDAQDPDPEGRIPRWDKASVQEMKDKFSAIGFGPRQLAVMSAFLGPDQLATESLLASDPEVLPWVEKYQRSRETVSQTDYEVDLITTLTKLSSLGQQINYEAYTYPVKKIELSKLKL
SIO_010081: LOC105053549
subclass of: SO_0000673
so part of: LOC105053549
location: complement(join(3396367..3396477,3397478..3397612,3398246..3398383,3399290..3399396,3400744..3400874,3401006..3401046,3401149..3401214,3401357..3401391,3401487..3401547,3411173..3411280,3411546..3411638))
location: region:3396367-3411638:-1
so has part: feature:3411546-3411638:-1:exon
so has part: feature:3411173-3411280:-1:exon
so has part: feature:3401487-3401547:-1:exon
so has part: feature:3401357-3401391:-1:exon
so has part: feature:3401149-3401214:-1:exon
so has part: feature:3401006-3401046:-1:exon
so has part: feature:3400744-3400874:-1:exon
so has part: feature:3399290-3399396:-1:exon
so has part: feature:3398246-3398383:-1:exon
so has part: feature:3397478-3397612:-1:exon
so has part: feature:3396367-3396477:-1:exon

XP_029122990.1
type: Protein
SIO_000068: ncbiprotein

position:3396367:-1
position: 3396367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3411638:-1
position: 3411638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3411546-3411638:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3411173-3411280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3401487-3401547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3401357-3401391:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3401149-3401214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3401006-3401046:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3400744-3400874:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3399290-3399396:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3398246-3398383:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3397478-3397612:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3396367-3396477:-1:exon

LOC105053549
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thylakoid lumenal 29 kDa protein, chloroplastic isoform X1
translation: MAGVSFLSTLPSLLPHSPQPSLLLAAPKHTNGGICCQHKVDDSGVPDGQHRSNRRDVLSCFGAVIGVEMIGRSGSFTRMANAADLIQRRQRSEFQSNIKDTLSAAVKGYPDLVPSILTLALNDAMTYDKATKSGGPNGSISLSPEISRPENSGLSAALNLLVEAKRDIDSYSKGGPISFADLIQFAAQAAVKKTFLDSAIRKCGGNEEKGRLLYTAYGSNGQWGLFDKQFGRNDAQDPDPEGRIPRWDKASVQEMKDKFSAIGFGPRQLAVMSAFLGPDQLATESLLASDPEVLPWVEKYQRSRETVSQTDYEVDLITTLTKLSSLGQQINYEAYTYPVKKIELSKLKL
SIO_010081: LOC105053549
subclass of: SO_0000673
so part of: LOC105053549
location: complement(join(3396367..3396477,3397478..3397612,3398246..3398383,3399290..3399396,3400744..3400874,3401006..3401046,3401149..3401214,3401357..3401391,3401463..3401547,3411173..3411280,3411546..3411638))
location: region:3396367-3411638:-1
so has part: feature:3411546-3411638:-1:exon
so has part: feature:3411173-3411280:-1:exon
so has part: feature:3401463-3401547:-1:exon
so has part: feature:3401357-3401391:-1:exon
so has part: feature:3401149-3401214:-1:exon
so has part: feature:3401006-3401046:-1:exon
so has part: feature:3400744-3400874:-1:exon
so has part: feature:3399290-3399396:-1:exon
so has part: feature:3398246-3398383:-1:exon
so has part: feature:3397478-3397612:-1:exon
so has part: feature:3396367-3396477:-1:exon

XP_010933064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3411546-3411638:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3411173-3411280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3401463-3401547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3401357-3401391:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3401149-3401214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3401006-3401046:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3400744-3400874:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3399290-3399396:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3398246-3398383:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3397478-3397612:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3396367-3396477:-1:exon

LOC105053549
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thylakoid lumenal 29 kDa protein, chloroplastic isoform X3
translation: MIGRSGSFTRMANAADLIQRRQRSEFQSNIKDTLSAAVKGYPDLVPSILTLALNDAMTYDKATKSGGPNGSISLSPEISRPENSGLSAALNLLVEAKRDIDSYSKGGPISFADLIQFAAQAAVKKTFLDSAIRKCGGNEEKGRLLYTAYGSNGQWGLFDKQFGRNDAQDPDPEGRIPRWDKASVQEMKDKFSAIGFGPRQLAVMSAFLGPDQLATESLLASDPEVLPWVEKYQRSRETVSQTDYEVDLITTLTKLSSLGQQINYEAYTYPVKKIELSKLKL
SIO_010081: LOC105053549
subclass of: SO_0000673
so part of: LOC105053549
location: complement(join(3396367..3396477,3397478..3397612,3398246..3398383,3399290..3399396,3400744..3400874,3401006..3401046,3401149..3401214,3401357..3401391,3401463..3401544))
location: region:3396367-3401544:-1
so has part: feature:3401463-3401544:-1:exon
so has part: feature:3401357-3401391:-1:exon
so has part: feature:3401149-3401214:-1:exon
so has part: feature:3401006-3401046:-1:exon
so has part: feature:3400744-3400874:-1:exon
so has part: feature:3399290-3399396:-1:exon
so has part: feature:3398246-3398383:-1:exon
so has part: feature:3397478-3397612:-1:exon
so has part: feature:3396367-3396477:-1:exon

XP_019709169.1
type: Protein
SIO_000068: ncbiprotein

position:3401544:-1
position: 3401544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3401463-3401544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3401357-3401391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3401149-3401214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3401006-3401046:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3400744-3400874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3399290-3399396:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3398246-3398383:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3397478-3397612:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3396367-3396477:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 51953
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 3436019..3436118
location: region:3436019-3436118:1
so has part: feature:3436019-3436118:1:region

position:3436019:1
position: 3436019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3436118:1
position: 3436118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3436019-3436118:1:region

LOC105053557
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053557
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3439624..3440580)
location: region:3439624-3440580:-1
so has part: feature:3439624-3440580:-1:exon
subclass of: SO_0000010

105053557
type: Gene
SIO_000068: ncbigene

position:3439624:-1
position: 3439624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3440580:-1
position: 3440580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3439624-3440580:-1:exon

LOC105053557
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053557
product: protein TIC 20-II, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010934766.3
SIO_010081: LOC105053557
subclass of: SO_0000673
so part of: LOC105053557
location: complement(3439624..3440580)
location: region:3439624-3440580:-1
so has part: feature:3439624-3440580:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3439624-3440580:-1:exon

LOC105053557
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053557
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein TIC 20-II, chloroplastic
translation: MATFSLLRFSPLPPLQTLPKSRPFLQSPTVQIPLRLKSTAAIRSIPRSNTISASYRPAVPASNRLLAALAYSLPFLNSLHYARFLFARLPAAAAAAAPLVPLVSAYRAIPYASFVAFFALYLGVVRNPAFDRFVRFNSMQAVVLDVLLALPVLVQRVVGVPSRGLGFRLLVLGYDAIFIFSAACFFYSLANCILGRTPYLPLVAAAADRQL
SIO_010081: LOC105053557
subclass of: SO_0000673
so part of: LOC105053557
location: complement(3439864..3440499)
location: region:3439864-3440499:-1
so has part: feature:3439864-3440499:-1:exon

XP_010933068.1
type: Protein
SIO_000068: ncbiprotein

position:3439864:-1
position: 3439864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3440499:-1
position: 3440499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3439864-3440499:-1:exon

LOC105053556
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053556
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3440543..3451461
location: region:3440543-3451461:1
so has part: feature:3440543-3451461:1:exon

105053556
type: Gene
SIO_000068: ncbigene

position:3440543:1
position: 3440543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3451461:1
position: 3451461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3440543-3451461:1:exon

LOC105053556
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053556
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pseudo: true
SIO_010081: LOC105053556
subclass of: SO_0000673
so part of: LOC105053556
location: 3440543..3440911
location: region:3440543-3440911:1
so has part: feature:3440543-3440911:1:exon

position:3440911:1
position: 3440911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3440543-3440911:1:exon

LOC105053556
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053556
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pseudo: true
SIO_010081: LOC105053556
subclass of: SO_0000673
so part of: LOC105053556
location: 3441966..3442090
location: region:3441966-3442090:1
so has part: feature:3441966-3442090:1:exon

position:3441966:1
position: 3441966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3442090:1
position: 3442090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3441966-3442090:1:exon

LOC105053556
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053556
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pseudo: true
SIO_010081: LOC105053556
subclass of: SO_0000673
so part of: LOC105053556
location: 3442206..3442316
location: region:3442206-3442316:1
so has part: feature:3442206-3442316:1:exon

position:3442206:1
position: 3442206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3442316:1
position: 3442316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3442206-3442316:1:exon

LOC105053556
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053556
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pseudo: true
SIO_010081: LOC105053556
subclass of: SO_0000673
so part of: LOC105053556
location: 3445218..3445271
location: region:3445218-3445271:1
so has part: feature:3445218-3445271:1:exon

position:3445218:1
position: 3445218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3445271:1
position: 3445271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3445218-3445271:1:exon

LOC105053556
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053556
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pseudo: true
SIO_010081: LOC105053556
subclass of: SO_0000673
so part of: LOC105053556
location: 3447743..3447813
location: region:3447743-3447813:1
so has part: feature:3447743-3447813:1:exon

position:3447743:1
position: 3447743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3447813:1
position: 3447813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3447743-3447813:1:exon

LOC105053556
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053556
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pseudo: true
SIO_010081: LOC105053556
subclass of: SO_0000673
so part of: LOC105053556
location: 3447899..3447981
location: region:3447899-3447981:1
so has part: feature:3447899-3447981:1:exon

position:3447899:1
position: 3447899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3447981:1
position: 3447981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3447899-3447981:1:exon

LOC105053556
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053556
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pseudo: true
SIO_010081: LOC105053556
subclass of: SO_0000673
so part of: LOC105053556
location: 3448796..3448860
location: region:3448796-3448860:1
so has part: feature:3448796-3448860:1:exon

position:3448796:1
position: 3448796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3448860:1
position: 3448860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3448796-3448860:1:exon

LOC105053556
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053556
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pseudo: true
SIO_010081: LOC105053556
subclass of: SO_0000673
so part of: LOC105053556
location: 3448946..3449020
location: region:3448946-3449020:1
so has part: feature:3448946-3449020:1:exon

position:3448946:1
position: 3448946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3449020:1
position: 3449020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3448946-3449020:1:exon

LOC105053556
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053556
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pseudo: true
SIO_010081: LOC105053556
subclass of: SO_0000673
so part of: LOC105053556
location: 3451047..3451461
location: region:3451047-3451461:1
so has part: feature:3451047-3451461:1:exon

position:3451047:1
position: 3451047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3451047-3451461:1:exon

LOC105053558
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053558
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3456534..3459253
location: region:3456534-3459253:1
so has part: feature:3456534-3459253:1:exon
subclass of: SO_0000010

105053558
type: Gene
SIO_000068: ncbigene

position:3456534:1
position: 3456534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3459253:1
position: 3459253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3456534-3459253:1:exon

LOC105053558
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053558
product: uncharacterized LOC105053558
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010934767.3
SIO_010081: LOC105053558
subclass of: SO_0000673
so part of: LOC105053558
location: 3456534..3459253
location: region:3456534-3459253:1
so has part: feature:3456534-3459253:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3456534-3459253:1:exon

LOC105053558
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053558
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053558
translation: MPKSSSQSPIITPMNPIIKTHPQILTLIPPPPQPPTLNPNPPPQEHDNGDDDDDLLHLQSYPQSLLMDEEDGLEPNPHNDLTLNPPQSSNPSSDESRFSSVLFRDPDEEEEEEEEEEEAADEEDDEIDGNEDLKPALNSLPVPSTASAPVPAPAADPRPPAPHIDPSPHISSQFYTFNRDSHSLMVRCILEGRLATPDEIRGATPGPVLKSWRSVWKDRNEDTAYLTAWKRIQDKLAAHLDPNPGSLPALFFKNNPAQRVSHVDQWQDIVATAHADPDLLRHLGLKETVDRIKQSWTVGAKFYGIPESFIRVCVASCPVCSSASSAMSQGGASAAARSKRRRFEYTESFDVPAKDVPRRLQQLAAKHKVVLCIRQKYIRYKPFMAEVKDYACHRAGEPSSASASSKKARVLKREPYQSKRCGCGFRIRAIVPITNYNEKDKTFVYQEEGIAVFKLYAVHTGHEPGPLDGNARIMHRVVGHRGGFDLDPADYGVKDDAEPESFSNLIGKDDSGDLHHMVLQQLQELRVEAGLLEGKIAKMPLEMVGSLSRELLDILHRLRSVAGTQHSEEALVAGDEEVGQWGHDGNHHLDRHDRIFGKDAEMINEEENDFDSTLGAIVPWDRMSTECQDRKLLMRESLKPDKWLMKEDCGDFDEKSILNCGEDADSKLMKPLRHDETIVPDPNLVGMQADGFYPDVAKWYDSPSCLDPGADSVDGGFRHGGIV
SIO_010081: LOC105053558
subclass of: SO_0000673
so part of: LOC105053558
location: 3456774..3458945
location: region:3456774-3458945:1
so has part: feature:3456774-3458945:1:exon

XP_010933069.1
type: Protein
SIO_000068: ncbiprotein

position:3456774:1
position: 3456774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3458945:1
position: 3458945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3456774-3458945:1:exon

LOC105053559
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3682259..3685027
location: region:3682259-3685027:1
so has part: feature:3682259-3685027:1:exon

105053559
type: Gene
SIO_000068: ncbigene

position:3682259:1
position: 3682259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3685027:1
position: 3685027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3682259-3685027:1:exon

LOC105053559
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053559
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC105053559
subclass of: SO_0000673
so part of: LOC105053559
location: 3682259..3682635
location: region:3682259-3682635:1
so has part: feature:3682259-3682635:1:exon

position:3682635:1
position: 3682635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3682259-3682635:1:exon

LOC105053559
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053559
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC105053559
subclass of: SO_0000673
so part of: LOC105053559
location: 3682973..3683792
location: region:3682973-3683792:1
so has part: feature:3682973-3683792:1:exon

position:3682973:1
position: 3682973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3683792:1
position: 3683792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3682973-3683792:1:exon

LOC105053559
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053559
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC105053559
subclass of: SO_0000673
so part of: LOC105053559
location: 3684036..3684141
location: region:3684036-3684141:1
so has part: feature:3684036-3684141:1:exon

position:3684036:1
position: 3684036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3684141:1
position: 3684141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3684036-3684141:1:exon

LOC105053559
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053559
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC105053559
subclass of: SO_0000673
so part of: LOC105053559
location: 3684269..3685027
location: region:3684269-3685027:1
so has part: feature:3684269-3685027:1:exon

position:3684269:1
position: 3684269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3684269-3685027:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 51953
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 4114270..4114369
location: region:4114270-4114369:1
so has part: feature:4114270-4114369:1:region

position:4114270:1
position: 4114270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4114369:1
position: 4114369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4114270-4114369:1:region

LOC105053560
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4158160..4222260
location: region:4158160-4222260:1
so has part: feature:4158160-4222260:1:exon
subclass of: SO_0000010

105053560
type: Gene
SIO_000068: ncbigene

position:4158160:1
position: 4158160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4222260:1
position: 4222260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4158160-4222260:1:exon

LOC105053560
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053560
product: tetraspanin-10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_010934768.2
SIO_010081: LOC105053560
subclass of: SO_0000673
so part of: LOC105053560
location: join(4158160..4158508,4159217..4159329,4159421..4159475,4159573..4159628,4178631..4178678,4179227..4179275,4179378..4179461,4179540..4179607,4221350..4221475,4221579..4221654,4221885..4222260)
location: region:4158160-4222260:1
so has part: feature:4158160-4158508:1:exon
so has part: feature:4159217-4159329:1:exon
so has part: feature:4159421-4159475:1:exon
so has part: feature:4159573-4159628:1:exon
so has part: feature:4178631-4178678:1:exon
so has part: feature:4179227-4179275:1:exon
so has part: feature:4179378-4179461:1:exon
so has part: feature:4179540-4179607:1:exon
so has part: feature:4221350-4221475:1:exon
so has part: feature:4221579-4221654:1:exon
so has part: feature:4221885-4222260:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4158160-4158508:1:exon

position:4158508:1
position: 4158508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4159217-4159329:1:exon

position:4159217:1
position: 4159217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4159329:1
position: 4159329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4159421-4159475:1:exon

position:4159421:1
position: 4159421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4159475:1
position: 4159475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4159573-4159628:1:exon

position:4159573:1
position: 4159573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4159628:1
position: 4159628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4178631-4178678:1:exon

position:4178631:1
position: 4178631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4178678:1
position: 4178678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4179227-4179275:1:exon

position:4179227:1
position: 4179227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4179275:1
position: 4179275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4179378-4179461:1:exon

position:4179378:1
position: 4179378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4179461:1
position: 4179461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4179540-4179607:1:exon

position:4179540:1
position: 4179540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4179607:1
position: 4179607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4221350-4221475:1:exon

position:4221350:1
position: 4221350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4221475:1
position: 4221475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4221579-4221654:1:exon

position:4221579:1
position: 4221579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4221654:1
position: 4221654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4221885-4222260:1:exon

position:4221885:1
position: 4221885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053560
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053560
product: tetraspanin-10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_029267159.1
SIO_010081: LOC105053560
subclass of: SO_0000673
so part of: LOC105053560
location: join(4158339..4158508,4158784..4159070,4159217..4159329,4159421..4159475,4159573..4159628,4178631..4178678,4179227..4179275,4179378..4179461,4179540..4179607,4221350..4221475,4221579..4221654,4221885..4222260)
location: region:4158339-4222260:1
so has part: feature:4158339-4158508:1:exon
so has part: feature:4158784-4159070:1:exon
so has part: feature:4159217-4159329:1:exon
so has part: feature:4159421-4159475:1:exon
so has part: feature:4159573-4159628:1:exon
so has part: feature:4178631-4178678:1:exon
so has part: feature:4179227-4179275:1:exon
so has part: feature:4179378-4179461:1:exon
so has part: feature:4179540-4179607:1:exon
so has part: feature:4221350-4221475:1:exon
so has part: feature:4221579-4221654:1:exon
so has part: feature:4221885-4222260:1:exon

position:4158339:1
position: 4158339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4158339-4158508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4158784-4159070:1:exon

position:4158784:1
position: 4158784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4159070:1
position: 4159070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4159217-4159329:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4159421-4159475:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4159573-4159628:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4178631-4178678:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4179227-4179275:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4179378-4179461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4179540-4179607:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4221350-4221475:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4221579-4221654:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4221885-4222260:1:exon

LOC105053560
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053560
product: tetraspanin-10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_010934771.3
SIO_010081: LOC105053560
subclass of: SO_0000673
so part of: LOC105053560
location: join(4158339..4158508,4158784..4158905,4158999..4159070,4159217..4159329,4159421..4159475,4159573..4159628,4178631..4178678,4179227..4179275,4179378..4179461,4179540..4179607,4221350..4221475,4221579..4221654,4221885..4222260)
location: region:4158339-4222260:1
so has part: feature:4158339-4158508:1:exon
so has part: feature:4158784-4158905:1:exon
so has part: feature:4158999-4159070:1:exon
so has part: feature:4159217-4159329:1:exon
so has part: feature:4159421-4159475:1:exon
so has part: feature:4159573-4159628:1:exon
so has part: feature:4178631-4178678:1:exon
so has part: feature:4179227-4179275:1:exon
so has part: feature:4179378-4179461:1:exon
so has part: feature:4179540-4179607:1:exon
so has part: feature:4221350-4221475:1:exon
so has part: feature:4221579-4221654:1:exon
so has part: feature:4221885-4222260:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4158339-4158508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4158784-4158905:1:exon

position:4158905:1
position: 4158905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4158999-4159070:1:exon

position:4158999:1
position: 4158999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4159217-4159329:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4159421-4159475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4159573-4159628:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4178631-4178678:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4179227-4179275:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4179378-4179461:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4179540-4179607:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4221350-4221475:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4221579-4221654:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4221885-4222260:1:exon

LOC105053560
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053560
product: tetraspanin-10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_010934770.3
SIO_010081: LOC105053560
subclass of: SO_0000673
so part of: LOC105053560
location: join(4158339..4158508,4158999..4159070,4159217..4159329,4159421..4159475,4159573..4159628,4178631..4178678,4179227..4179275,4179378..4179461,4179540..4179607,4221350..4221475,4221579..4221654,4221885..4222260)
location: region:4158339-4222260:1
so has part: feature:4158339-4158508:1:exon
so has part: feature:4158999-4159070:1:exon
so has part: feature:4159217-4159329:1:exon
so has part: feature:4159421-4159475:1:exon
so has part: feature:4159573-4159628:1:exon
so has part: feature:4178631-4178678:1:exon
so has part: feature:4179227-4179275:1:exon
so has part: feature:4179378-4179461:1:exon
so has part: feature:4179540-4179607:1:exon
so has part: feature:4221350-4221475:1:exon
so has part: feature:4221579-4221654:1:exon
so has part: feature:4221885-4222260:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4158339-4158508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4158999-4159070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4159217-4159329:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4159421-4159475:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4159573-4159628:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4178631-4178678:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4179227-4179275:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4179378-4179461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4179540-4179607:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4221350-4221475:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4221579-4221654:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4221885-4222260:1:exon

LOC105053560
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053560
product: tetraspanin-10, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_029267161.1
SIO_010081: LOC105053560
subclass of: SO_0000673
so part of: LOC105053560
location: join(4158339..4158508,4159003..4159070,4159217..4159329,4159421..4159475,4159573..4159628,4178631..4178678,4179227..4179275,4179378..4179461,4179540..4179607,4221350..4221475,4221579..4221654,4221885..4222260)
location: region:4158339-4222260:1
so has part: feature:4158339-4158508:1:exon
so has part: feature:4159003-4159070:1:exon
so has part: feature:4159217-4159329:1:exon
so has part: feature:4159421-4159475:1:exon
so has part: feature:4159573-4159628:1:exon
so has part: feature:4178631-4178678:1:exon
so has part: feature:4179227-4179275:1:exon
so has part: feature:4179378-4179461:1:exon
so has part: feature:4179540-4179607:1:exon
so has part: feature:4221350-4221475:1:exon
so has part: feature:4221579-4221654:1:exon
so has part: feature:4221885-4222260:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4158339-4158508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4159003-4159070:1:exon

position:4159003:1
position: 4159003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4159217-4159329:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4159421-4159475:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4159573-4159628:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4178631-4178678:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4179227-4179275:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4179378-4179461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4179540-4179607:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4221350-4221475:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4221579-4221654:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4221885-4222260:1:exon

LOC105053560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-10 isoform X1
translation: MSTGTSIFVVRWINFFTMILAIAVICFGIWMSTHHDACRRTLTLPVMGLGALILLVSLIGFLGAWKNITILLWAYLVILFLILVAIMVFTVLAFIITNNGSGHAVAGLRYKEYHLHDYSPWFLKQLNNTKNWRRLKSCLVKTEDCNKLPKKYKTLKEYKLAELTPIEAGCCRPPSECGYPTVNASYYDLSYHPVSDNKDCKLYKNAHDVKCYDCDSCKAGVAQYMKIEWRVVAIFNVILFVILSAVYFVGCCARRNAEGSRSSKVRGR
SIO_010081: LOC105053560
subclass of: SO_0000673
so part of: LOC105053560
location: join(4158455..4158508,4159217..4159329,4159421..4159475,4159573..4159628,4178631..4178678,4179227..4179275,4179378..4179461,4179540..4179607,4221350..4221475,4221579..4221654,4221885..4221962)
location: region:4158455-4221962:1
so has part: feature:4158455-4158508:1:exon
so has part: feature:4159217-4159329:1:exon
so has part: feature:4159421-4159475:1:exon
so has part: feature:4159573-4159628:1:exon
so has part: feature:4178631-4178678:1:exon
so has part: feature:4179227-4179275:1:exon
so has part: feature:4179378-4179461:1:exon
so has part: feature:4179540-4179607:1:exon
so has part: feature:4221350-4221475:1:exon
so has part: feature:4221579-4221654:1:exon
so has part: feature:4221885-4221962:1:exon

XP_010933070.1
type: Protein
SIO_000068: ncbiprotein

position:4158455:1
position: 4158455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4221962:1
position: 4221962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4158455-4158508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4159217-4159329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4159421-4159475:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4159573-4159628:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4178631-4178678:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4179227-4179275:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4179378-4179461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4179540-4179607:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4221350-4221475:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4221579-4221654:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4221885-4221962:1:exon

LOC105053560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-10 isoform X2
translation: MSTHHDACRRTLTLPVMGLGALILLVSLIGFLGAWKNITILLWAYLVILFLILVAIMVFTVLAFIITNNGSGHAVAGLRYKEYHLHDYSPWFLKQLNNTKNWRRLKSCLVKTEDCNKLPKKYKTLKEYKLAELTPIEAGCCRPPSECGYPTVNASYYDLSYHPVSDNKDCKLYKNAHDVKCYDCDSCKAGVAQYMKIEWRVVAIFNVILFVILSAVYFVGCCARRNAEGSRSSKVRGR
SIO_010081: LOC105053560
subclass of: SO_0000673
so part of: LOC105053560
location: join(4159253..4159329,4159421..4159475,4159573..4159628,4178631..4178678,4179227..4179275,4179378..4179461,4179540..4179607,4221350..4221475,4221579..4221654,4221885..4221962)
location: region:4159253-4221962:1
so has part: feature:4159253-4159329:1:exon
so has part: feature:4159421-4159475:1:exon
so has part: feature:4159573-4159628:1:exon
so has part: feature:4178631-4178678:1:exon
so has part: feature:4179227-4179275:1:exon
so has part: feature:4179378-4179461:1:exon
so has part: feature:4179540-4179607:1:exon
so has part: feature:4221350-4221475:1:exon
so has part: feature:4221579-4221654:1:exon
so has part: feature:4221885-4221962:1:exon

XP_029122992.1
type: Protein
SIO_000068: ncbiprotein

position:4159253:1
position: 4159253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4159253-4159329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4159421-4159475:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4159573-4159628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4178631-4178678:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4179227-4179275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4179378-4179461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4179540-4179607:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4221350-4221475:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4221579-4221654:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4221885-4221962:1:exon

LOC105053560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-10 isoform X2
translation: MSTHHDACRRTLTLPVMGLGALILLVSLIGFLGAWKNITILLWAYLVILFLILVAIMVFTVLAFIITNNGSGHAVAGLRYKEYHLHDYSPWFLKQLNNTKNWRRLKSCLVKTEDCNKLPKKYKTLKEYKLAELTPIEAGCCRPPSECGYPTVNASYYDLSYHPVSDNKDCKLYKNAHDVKCYDCDSCKAGVAQYMKIEWRVVAIFNVILFVILSAVYFVGCCARRNAEGSRSSKVRGR
SIO_010081: LOC105053560
subclass of: SO_0000673
so part of: LOC105053560
location: join(4159253..4159329,4159421..4159475,4159573..4159628,4178631..4178678,4179227..4179275,4179378..4179461,4179540..4179607,4221350..4221475,4221579..4221654,4221885..4221962)
location: region:4159253-4221962:1
so has part: feature:4159253-4159329:1:exon
so has part: feature:4159421-4159475:1:exon
so has part: feature:4159573-4159628:1:exon
so has part: feature:4178631-4178678:1:exon
so has part: feature:4179227-4179275:1:exon
so has part: feature:4179378-4179461:1:exon
so has part: feature:4179540-4179607:1:exon
so has part: feature:4221350-4221475:1:exon
so has part: feature:4221579-4221654:1:exon
so has part: feature:4221885-4221962:1:exon

XP_029122994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4159253-4159329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4159421-4159475:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4159573-4159628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4178631-4178678:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4179227-4179275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4179378-4179461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4179540-4179607:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4221350-4221475:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4221579-4221654:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4221885-4221962:1:exon

LOC105053560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-10 isoform X2
translation: MSTHHDACRRTLTLPVMGLGALILLVSLIGFLGAWKNITILLWAYLVILFLILVAIMVFTVLAFIITNNGSGHAVAGLRYKEYHLHDYSPWFLKQLNNTKNWRRLKSCLVKTEDCNKLPKKYKTLKEYKLAELTPIEAGCCRPPSECGYPTVNASYYDLSYHPVSDNKDCKLYKNAHDVKCYDCDSCKAGVAQYMKIEWRVVAIFNVILFVILSAVYFVGCCARRNAEGSRSSKVRGR
SIO_010081: LOC105053560
subclass of: SO_0000673
so part of: LOC105053560
location: join(4159253..4159329,4159421..4159475,4159573..4159628,4178631..4178678,4179227..4179275,4179378..4179461,4179540..4179607,4221350..4221475,4221579..4221654,4221885..4221962)
location: region:4159253-4221962:1
so has part: feature:4159253-4159329:1:exon
so has part: feature:4159421-4159475:1:exon
so has part: feature:4159573-4159628:1:exon
so has part: feature:4178631-4178678:1:exon
so has part: feature:4179227-4179275:1:exon
so has part: feature:4179378-4179461:1:exon
so has part: feature:4179540-4179607:1:exon
so has part: feature:4221350-4221475:1:exon
so has part: feature:4221579-4221654:1:exon
so has part: feature:4221885-4221962:1:exon

XP_010933072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4159253-4159329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4159421-4159475:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4159573-4159628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4178631-4178678:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4179227-4179275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4179378-4179461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4179540-4179607:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4221350-4221475:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4221579-4221654:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4221885-4221962:1:exon

LOC105053560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-10 isoform X2
translation: MSTHHDACRRTLTLPVMGLGALILLVSLIGFLGAWKNITILLWAYLVILFLILVAIMVFTVLAFIITNNGSGHAVAGLRYKEYHLHDYSPWFLKQLNNTKNWRRLKSCLVKTEDCNKLPKKYKTLKEYKLAELTPIEAGCCRPPSECGYPTVNASYYDLSYHPVSDNKDCKLYKNAHDVKCYDCDSCKAGVAQYMKIEWRVVAIFNVILFVILSAVYFVGCCARRNAEGSRSSKVRGR
SIO_010081: LOC105053560
subclass of: SO_0000673
so part of: LOC105053560
location: join(4159253..4159329,4159421..4159475,4159573..4159628,4178631..4178678,4179227..4179275,4179378..4179461,4179540..4179607,4221350..4221475,4221579..4221654,4221885..4221962)
location: region:4159253-4221962:1
so has part: feature:4159253-4159329:1:exon
so has part: feature:4159421-4159475:1:exon
so has part: feature:4159573-4159628:1:exon
so has part: feature:4178631-4178678:1:exon
so has part: feature:4179227-4179275:1:exon
so has part: feature:4179378-4179461:1:exon
so has part: feature:4179540-4179607:1:exon
so has part: feature:4221350-4221475:1:exon
so has part: feature:4221579-4221654:1:exon
so has part: feature:4221885-4221962:1:exon

XP_010933073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4159253-4159329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4159421-4159475:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4159573-4159628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4178631-4178678:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4179227-4179275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4179378-4179461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4179540-4179607:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4221350-4221475:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4221579-4221654:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4221885-4221962:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 51953
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 4281123..4281222
location: region:4281123-4281222:1
so has part: feature:4281123-4281222:1:region

position:4281123:1
position: 4281123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4281222:1
position: 4281222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4281123-4281222:1:region

LOC105053561
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4302397..4309920)
location: region:4302397-4309920:-1
so has part: feature:4302397-4309920:-1:exon
subclass of: SO_0000010

105053561
type: Gene
SIO_000068: ncbigene

position:4302397:-1
position: 4302397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4309920:-1
position: 4309920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4302397-4309920:-1:exon

LOC105053561
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053561
product: enolase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_010934774.3
SIO_010081: LOC105053561
subclass of: SO_0000673
so part of: LOC105053561
location: complement(join(4302397..4302767,4303038..4303094,4303193..4303244,4303327..4303415,4303573..4303623,4303706..4303900,4304070..4304150,4304273..4304335,4306265..4306339,4306419..4306499,4306588..4306689,4306771..4306851,4306966..4307052,4307191..4307238,4308692..4308756,4309194..4309257,4309566..4309920))
location: region:4302397-4309920:-1
so has part: feature:4309566-4309920:-1:exon
so has part: feature:4309194-4309257:-1:exon
so has part: feature:4308692-4308756:-1:exon
so has part: feature:4307191-4307238:-1:exon
so has part: feature:4306966-4307052:-1:exon
so has part: feature:4306771-4306851:-1:exon
so has part: feature:4306588-4306689:-1:exon
so has part: feature:4306419-4306499:-1:exon
so has part: feature:4306265-4306339:-1:exon
so has part: feature:4304273-4304335:-1:exon
so has part: feature:4304070-4304150:-1:exon
so has part: feature:4303706-4303900:-1:exon
so has part: feature:4303573-4303623:-1:exon
so has part: feature:4303327-4303415:-1:exon
so has part: feature:4303193-4303244:-1:exon
so has part: feature:4303038-4303094:-1:exon
so has part: feature:4302397-4302767:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4309566-4309920:-1:exon

position:4309566:-1
position: 4309566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4309194-4309257:-1:exon

position:4309194:-1
position: 4309194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4309257:-1
position: 4309257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4308692-4308756:-1:exon

position:4308692:-1
position: 4308692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4308756:-1
position: 4308756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4307191-4307238:-1:exon

position:4307191:-1
position: 4307191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4307238:-1
position: 4307238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4306966-4307052:-1:exon

position:4306966:-1
position: 4306966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4307052:-1
position: 4307052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4306771-4306851:-1:exon

position:4306771:-1
position: 4306771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4306851:-1
position: 4306851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4306588-4306689:-1:exon

position:4306588:-1
position: 4306588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4306689:-1
position: 4306689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4306419-4306499:-1:exon

position:4306419:-1
position: 4306419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4306499:-1
position: 4306499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4306265-4306339:-1:exon

position:4306265:-1
position: 4306265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4306339:-1
position: 4306339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4304273-4304335:-1:exon

position:4304273:-1
position: 4304273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4304335:-1
position: 4304335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4304070-4304150:-1:exon

position:4304070:-1
position: 4304070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4304150:-1
position: 4304150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4303706-4303900:-1:exon

position:4303706:-1
position: 4303706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4303900:-1
position: 4303900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4303573-4303623:-1:exon

position:4303573:-1
position: 4303573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4303623:-1
position: 4303623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4303327-4303415:-1:exon

position:4303327:-1
position: 4303327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4303415:-1
position: 4303415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4303193-4303244:-1:exon

position:4303193:-1
position: 4303193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4303244:-1
position: 4303244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4303038-4303094:-1:exon

position:4303038:-1
position: 4303038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4303094:-1
position: 4303094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4302397-4302767:-1:exon

position:4302767:-1
position: 4302767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053561
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: enolase 2
translation: MATIKCIKARQIFDSRGNPTVEVDCCLSDGTFSRAAVPSGASTGIYEALELRDGGSDYLGKGVLKAVTNVNSIIGPALIGKDPTAQAEIDTFMVQQLDGTSNEWGWCKQKLGANAILAVSLAVCKAGASVKKIPLYQHIANLAGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKTAIAKAGYTGKVVIGMDVAASEFYSDKDKTYDLNFKEENNDGSQKISGDSLKNVYKSFVSGYPIVSIEDPFDQDDWTHYAKMTEEIGEQVQIVGDDLLVTNPTRVAKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAAAVYAGAKFRAPVEPY
SIO_010081: LOC105053561
subclass of: SO_0000673
so part of: LOC105053561
location: complement(join(4302687..4302767,4303038..4303094,4303193..4303244,4303327..4303415,4303573..4303623,4303706..4303900,4304070..4304150,4304273..4304335,4306265..4306339,4306419..4306499,4306588..4306689,4306771..4306851,4306966..4307052,4307191..4307238,4308692..4308756,4309194..4309257,4309566..4309631))
location: region:4302687-4309631:-1
so has part: feature:4309566-4309631:-1:exon
so has part: feature:4309194-4309257:-1:exon
so has part: feature:4308692-4308756:-1:exon
so has part: feature:4307191-4307238:-1:exon
so has part: feature:4306966-4307052:-1:exon
so has part: feature:4306771-4306851:-1:exon
so has part: feature:4306588-4306689:-1:exon
so has part: feature:4306419-4306499:-1:exon
so has part: feature:4306265-4306339:-1:exon
so has part: feature:4304273-4304335:-1:exon
so has part: feature:4304070-4304150:-1:exon
so has part: feature:4303706-4303900:-1:exon
so has part: feature:4303573-4303623:-1:exon
so has part: feature:4303327-4303415:-1:exon
so has part: feature:4303193-4303244:-1:exon
so has part: feature:4303038-4303094:-1:exon
so has part: feature:4302687-4302767:-1:exon

XP_010933076.1
type: Protein
SIO_000068: ncbiprotein

position:4302687:-1
position: 4302687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4309631:-1
position: 4309631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4309566-4309631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4309194-4309257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4308692-4308756:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4307191-4307238:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4306966-4307052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4306771-4306851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4306588-4306689:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4306419-4306499:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4306265-4306339:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4304273-4304335:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4304070-4304150:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4303706-4303900:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4303573-4303623:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4303327-4303415:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4303193-4303244:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4303038-4303094:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4302687-4302767:-1:exon

LOC105053562
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4399076..>4408065)
location: region:4399076-4408065:-1
so has part: feature:4399076-4408065:-1:exon
subclass of: SO_0000010

105053562
type: Gene
SIO_000068: ncbigene

position:4399076:-1
position: 4399076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4408065:-1
position: 4408065
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4399076-4408065:-1:exon

LOC105053562
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053562
product: uncharacterized LOC105053562
inference: similar to RNA sequence (same species):INSD:GAJH01036092.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 196 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019853701.1
SIO_010081: LOC105053562
subclass of: SO_0000673
so part of: LOC105053562
location: complement(join(4399076..4399790,4407968..>4408065))
location: region:4399076-4408065:-1
so has part: feature:4407968-4408065:-1:exon
so has part: feature:4399076-4399790:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4407968-4408065:-1:exon

position:4407968:-1
position: 4407968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4399076-4399790:-1:exon

position:4399790:-1
position: 4399790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053562
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053562
inference: similar to RNA sequence (same species):INSD:GAJH01036092.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 196 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053562
translation: GWRAITECETSVNPQPRARDEFAAVGHQGGRSFFFAPGRGALFVDLGAHTEAGVTCGEGSLPSDEVLTNHSSEVLFVKFSNNGTCLHLPEMVQSSYGRWMRMIQCP
SIO_010081: LOC105053562
subclass of: SO_0000673
so part of: LOC105053562
location: complement(join(4399763..4399790,4407968..>4408065))
location: region:4399763-4408065:-1
so has part: feature:4407968-4408065:-1:exon
so has part: feature:4399763-4399790:-1:exon

XP_019709260.1
type: Protein
SIO_000068: ncbiprotein

position:4399763:-1
position: 4399763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4407968-4408065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4399763-4399790:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 51953
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 4585882..4585981
location: region:4585882-4585981:1
so has part: feature:4585882-4585981:1:region

position:4585882:1
position: 4585882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4585981:1
position: 4585981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4585882-4585981:1:region

LOC105053563
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053563
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4586003..4589384
location: region:4586003-4589384:1
so has part: feature:4586003-4589384:1:exon
subclass of: SO_0000010

105053563
type: Gene
SIO_000068: ncbigene

position:4586003:1
position: 4586003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4589384:1
position: 4589384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4586003-4589384:1:exon

LOC105053563
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053563
product: probable RNA helicase SDE3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_010934775.3
SIO_010081: LOC105053563
subclass of: SO_0000673
so part of: LOC105053563
location: join(4586003..4587495,4588019..4589384)
location: region:4586003-4589384:1
so has part: feature:4586003-4587495:1:exon
so has part: feature:4588019-4589384:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4586003-4587495:1:exon

position:4587495:1
position: 4587495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4588019-4589384:1:exon

position:4588019:1
position: 4588019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053563
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053563
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable RNA helicase SDE3
translation: MSNLYCTYYDQKWSKFQLYRVPLELDNKKLKKQMKKKNFYRSAQNDEKALVSFKITSVPERRPYLLSRDYVFVRRSGKKTKFEGRLIGVVKSTHILTEFGNDFLSNYSPSYKYDVSFSFNRTCLKRSHQAVKAALAPSFHHVLFPSCHPRTTEISLPSASFLNQRFGVDQMSAIHNILRLKGPPPYLINGPPSVPQKNSTLSTVGTTITEAIFQIYFHMNASRILVTSPKNHTCDTLISCLNKRIPDSDLFRANASFREVEDVPDDVFPLCSHDGECFSSPSLSDLHKFRVIVSTFMTCFRLQNSGISPGYFSHIFMVDASSATEPDTMVALANFVTDETAVVITGTQTRYADRVRSDMARRKGLKISYFRRLMESEPYLSNDPLCVCNLHEESEN
SIO_010081: LOC105053563
subclass of: SO_0000673
so part of: LOC105053563
location: join(4587247..4587495,4588019..4588960)
location: region:4587247-4588960:1
so has part: feature:4587247-4587495:1:exon
so has part: feature:4588019-4588960:1:exon

XP_010933077.1
type: Protein
SIO_000068: ncbiprotein

position:4587247:1
position: 4587247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4588960:1
position: 4588960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4587247-4587495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4588019-4588960:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 51953
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 4589457..4589556
location: region:4589457-4589556:1
so has part: feature:4589457-4589556:1:region

position:4589457:1
position: 4589457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4589556:1
position: 4589556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4589457-4589556:1:region

LOC105053572
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4775377..4794154
location: region:4775377-4794154:1
so has part: feature:4775377-4794154:1:exon

105053572
type: Gene
SIO_000068: ncbigene

position:4775377:1
position: 4775377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4794154:1
position: 4794154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4775377-4794154:1:exon

LOC105053572
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053572
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC105053572
subclass of: SO_0000673
so part of: LOC105053572
location: 4775377..4775450
location: region:4775377-4775450:1
so has part: feature:4775377-4775450:1:exon

position:4775450:1
position: 4775450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4775377-4775450:1:exon

LOC105053572
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053572
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC105053572
subclass of: SO_0000673
so part of: LOC105053572
location: 4776627..4777042
location: region:4776627-4777042:1
so has part: feature:4776627-4777042:1:exon

position:4776627:1
position: 4776627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4777042:1
position: 4777042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4776627-4777042:1:exon

LOC105053572
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053572
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC105053572
subclass of: SO_0000673
so part of: LOC105053572
location: 4781395..4781655
location: region:4781395-4781655:1
so has part: feature:4781395-4781655:1:exon

position:4781395:1
position: 4781395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4781655:1
position: 4781655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4781395-4781655:1:exon

LOC105053572
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053572
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC105053572
subclass of: SO_0000673
so part of: LOC105053572
location: 4791117..4791239
location: region:4791117-4791239:1
so has part: feature:4791117-4791239:1:exon

position:4791117:1
position: 4791117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4791239:1
position: 4791239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4791117-4791239:1:exon

LOC105053572
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053572
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC105053572
subclass of: SO_0000673
so part of: LOC105053572
location: 4793176..4794154
location: region:4793176-4794154:1
so has part: feature:4793176-4794154:1:exon

position:4793176:1
position: 4793176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4793176-4794154:1:exon

LOC109506414
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC109506414
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4818620..4820567
location: region:4818620-4820567:1
so has part: feature:4818620-4820567:1:exon
subclass of: SO_0000011

109506414
type: Gene
SIO_000068: ncbigene

position:4818620:1
position: 4818620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4820567:1
position: 4820567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4818620-4820567:1:exon

LOC109506414
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51953
nc RNA class: lncRNA
gene: LOC109506414
product: uncharacterized LOC109506414
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_003802094.1
SIO_010081: LOC109506414
subclass of: SO_0000673
so part of: LOC109506414
location: join(4818620..4819353,4819507..4819951,4820110..4820567)
location: region:4818620-4820567:1
so has part: feature:4818620-4819353:1:exon
so has part: feature:4819507-4819951:1:exon
so has part: feature:4820110-4820567:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4818620-4819353:1:exon

position:4819353:1
position: 4819353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4819507-4819951:1:exon

position:4819507:1
position: 4819507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4819951:1
position: 4819951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4820110-4820567:1:exon

position:4820110:1
position: 4820110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053571
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4820891..4824009)
location: region:4820891-4824009:-1
so has part: feature:4820891-4824009:-1:exon
subclass of: SO_0000010

105053571
type: Gene
SIO_000068: ncbigene

position:4820891:-1
position: 4820891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4824009:-1
position: 4824009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4820891-4824009:-1:exon

LOC105053571
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053571
product: (R)-specific enoyl-CoA hydratase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_010934787.3
SIO_010081: LOC105053571
subclass of: SO_0000673
so part of: LOC105053571
location: complement(join(4820891..4821294,4822068..4822183,4822264..4822379,4823549..4824009))
location: region:4820891-4824009:-1
so has part: feature:4823549-4824009:-1:exon
so has part: feature:4822264-4822379:-1:exon
so has part: feature:4822068-4822183:-1:exon
so has part: feature:4820891-4821294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4823549-4824009:-1:exon

position:4823549:-1
position: 4823549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4822264-4822379:-1:exon

position:4822264:-1
position: 4822264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4822379:-1
position: 4822379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4822068-4822183:-1:exon

position:4822068:-1
position: 4822068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4822183:-1
position: 4822183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4820891-4821294:-1:exon

position:4821294:-1
position: 4821294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053571
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053571
translation: MTMTMRVALLKRILCRPPPPLAISFRCSSSSSTTPEATRLLKVGDVLRESRRFSESDVAQYSEVTGDRNPVHLDADFARRIAGFDGGRVVHGMLVASLFPSVIATHFPGAVYVAQTLKFKLPVYIEDEVVAEVQAAHVRENKKRYIVKFATKCLVDKESLVLDGEAMAILPTLVLNK
SIO_010081: LOC105053571
subclass of: SO_0000673
so part of: LOC105053571
location: complement(join(4822087..4822183,4822264..4822379,4823549..4823869))
location: region:4822087-4823869:-1
so has part: feature:4823549-4823869:-1:exon
so has part: feature:4822264-4822379:-1:exon
so has part: feature:4822087-4822183:-1:exon

XP_010933089.1
type: Protein
SIO_000068: ncbiprotein

position:4822087:-1
position: 4822087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4823869:-1
position: 4823869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4823549-4823869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4822264-4822379:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4822087-4822183:-1:exon

LOC105053570
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4830739..4842272
location: region:4830739-4842272:1
so has part: feature:4830739-4842272:1:exon
subclass of: SO_0000010

105053570
type: Gene
SIO_000068: ncbigene

position:4830739:1
position: 4830739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4842272:1
position: 4842272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4830739-4842272:1:exon

LOC105053570
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053570
product: P-loop NTPase domain-containing protein LPA1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_029267162.1
SIO_010081: LOC105053570
subclass of: SO_0000673
so part of: LOC105053570
location: join(4830739..4830882,4831552..4831886,4835636..4835717,4837008..4837424,4837761..4838492,4839669..4839776,4841022..4841207,4841291..4841568,4841713..4842272)
location: region:4830739-4842272:1
so has part: feature:4830739-4830882:1:exon
so has part: feature:4831552-4831886:1:exon
so has part: feature:4835636-4835717:1:exon
so has part: feature:4837008-4837424:1:exon
so has part: feature:4837761-4838492:1:exon
so has part: feature:4839669-4839776:1:exon
so has part: feature:4841022-4841207:1:exon
so has part: feature:4841291-4841568:1:exon
so has part: feature:4841713-4842272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4830739-4830882:1:exon

position:4830882:1
position: 4830882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4831552-4831886:1:exon

position:4831552:1
position: 4831552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4831886:1
position: 4831886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4835636-4835717:1:exon

position:4835636:1
position: 4835636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4835717:1
position: 4835717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4837008-4837424:1:exon

position:4837008:1
position: 4837008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4837424:1
position: 4837424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4837761-4838492:1:exon

position:4837761:1
position: 4837761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4838492:1
position: 4838492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4839669-4839776:1:exon

position:4839669:1
position: 4839669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4839776:1
position: 4839776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4841022-4841207:1:exon

position:4841022:1
position: 4841022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4841207:1
position: 4841207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4841291-4841568:1:exon

position:4841291:1
position: 4841291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4841568:1
position: 4841568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4841713-4842272:1:exon

position:4841713:1
position: 4841713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053570
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053570
product: P-loop NTPase domain-containing protein LPA1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_029267163.1
SIO_010081: LOC105053570
subclass of: SO_0000673
so part of: LOC105053570
location: join(4830739..4830882,4831552..4831886,4835636..4835717,4837008..4837424,4837761..4838492,4839669..4839776,4841022..4841207,4841291..4841568,4841713..4841778,4841932..4842272)
location: region:4830739-4842272:1
so has part: feature:4830739-4830882:1:exon
so has part: feature:4831552-4831886:1:exon
so has part: feature:4835636-4835717:1:exon
so has part: feature:4837008-4837424:1:exon
so has part: feature:4837761-4838492:1:exon
so has part: feature:4839669-4839776:1:exon
so has part: feature:4841022-4841207:1:exon
so has part: feature:4841291-4841568:1:exon
so has part: feature:4841713-4841778:1:exon
so has part: feature:4841932-4842272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4830739-4830882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4831552-4831886:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4835636-4835717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4837008-4837424:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4837761-4838492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4839669-4839776:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4841022-4841207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4841291-4841568:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4841713-4841778:1:exon

position:4841778:1
position: 4841778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4841932-4842272:1:exon

position:4841932:1
position: 4841932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053570
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053570
product: P-loop NTPase domain-containing protein LPA1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029267164.1
SIO_010081: LOC105053570
subclass of: SO_0000673
so part of: LOC105053570
location: join(4830739..4830882,4831552..4831886,4835636..4835717,4837008..4837424,4837761..4838492,4839669..4839776,4841022..4841207,4841291..4841523,4841713..4842272)
location: region:4830739-4842272:1
so has part: feature:4830739-4830882:1:exon
so has part: feature:4831552-4831886:1:exon
so has part: feature:4835636-4835717:1:exon
so has part: feature:4837008-4837424:1:exon
so has part: feature:4837761-4838492:1:exon
so has part: feature:4839669-4839776:1:exon
so has part: feature:4841022-4841207:1:exon
so has part: feature:4841291-4841523:1:exon
so has part: feature:4841713-4842272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4830739-4830882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4831552-4831886:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4835636-4835717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4837008-4837424:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4837761-4838492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4839669-4839776:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4841022-4841207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4841291-4841523:1:exon

position:4841523:1
position: 4841523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4841713-4842272:1:exon

LOC105053570
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053570
product: P-loop NTPase domain-containing protein LPA1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029267166.1
SIO_010081: LOC105053570
subclass of: SO_0000673
so part of: LOC105053570
location: join(4830739..4830882,4831552..4831886,4835636..4835717,4837008..4837424,4837761..4838492,4839669..4839776,4841022..4841207,4841291..4841523,4841713..4841778,4841932..4842272)
location: region:4830739-4842272:1
so has part: feature:4830739-4830882:1:exon
so has part: feature:4831552-4831886:1:exon
so has part: feature:4835636-4835717:1:exon
so has part: feature:4837008-4837424:1:exon
so has part: feature:4837761-4838492:1:exon
so has part: feature:4839669-4839776:1:exon
so has part: feature:4841022-4841207:1:exon
so has part: feature:4841291-4841523:1:exon
so has part: feature:4841713-4841778:1:exon
so has part: feature:4841932-4842272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4830739-4830882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4831552-4831886:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4835636-4835717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4837008-4837424:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4837761-4838492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4839669-4839776:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4841022-4841207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4841291-4841523:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4841713-4841778:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4841932-4842272:1:exon

LOC105053570
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053570
product: P-loop NTPase domain-containing protein LPA1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_029267167.1
SIO_010081: LOC105053570
subclass of: SO_0000673
so part of: LOC105053570
location: join(4830739..4830882,4831552..4831886,4835636..4835717,4837008..4837424,4837761..4838492,4839669..4839776,4841022..4841207,4841300..4841568,4841713..4842272)
location: region:4830739-4842272:1
so has part: feature:4830739-4830882:1:exon
so has part: feature:4831552-4831886:1:exon
so has part: feature:4835636-4835717:1:exon
so has part: feature:4837008-4837424:1:exon
so has part: feature:4837761-4838492:1:exon
so has part: feature:4839669-4839776:1:exon
so has part: feature:4841022-4841207:1:exon
so has part: feature:4841300-4841568:1:exon
so has part: feature:4841713-4842272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4830739-4830882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4831552-4831886:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4835636-4835717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4837008-4837424:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4837761-4838492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4839669-4839776:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4841022-4841207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4841300-4841568:1:exon

position:4841300:1
position: 4841300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4841713-4842272:1:exon

LOC105053570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P-loop NTPase domain-containing protein LPA1 isoform X1
translation: MAEFPKLLYMVVVDEGGDGKESSSFRYTRPVLQSTLQLMGCKARHAFKISQRVYEVIRTVCPADLWFPHGAKISKSDVSGSPSGRQNDFKQSNCLGEGNVTYHSAQENVETSSSMAFALYKRQTTIVVKREKFLNVICSVLSEYKYVGPNQRADLVLACRIRERKELVIVLLSGTSGCGKSTLSSLLGSRLGITTVISTDSIRHMMRSFVDEKQNPLLWASTYHAGECLDPVAVAEAKVKRKAKKPAGASYLMLKEELYDNAPTEQHDGRSPDSRLKLISKKQMAVEGFKAQSEMVIESLDQLITTWEDRKESVIIEGVHLSLNFVMGLMKKHPSVIPFMICIANEDKHMERFAIRSKYMTLDPEKNKYVKYFQNIRIIQDYLCNRADKHRVPKINNTNVDQSVATIHATVFSCLRRREAGEQLYDPATNTVPIIDEEYRNQCAANSLGSKGMFQLIQRKGSSRRLMALINKDGSVAKTWLVDGKGELLSGQDSEKCVEDPVYGLSQIGKSEPVNLQFGNFGIRGWPNDIGSTSQTASICDSGADGTDAGSRYFSSCCSSPRISEGPAKELKEESSVSVSEEADDPPDVNSGEDESEIDSKEIPEEMEGSVDEELTKSDEEFDDLAMRDMQENGYWSDDEKEPGDVHRPTAENKLTETCSEMIAGDDLKMQGCMKTRRKKYS
SIO_010081: LOC105053570
subclass of: SO_0000673
so part of: LOC105053570
location: join(4830739..4830882,4831552..4831886,4835636..4835717,4837008..4837424,4837761..4838492,4839669..4839776,4841022..4841207,4841291..4841335)
location: region:4830739-4841335:1
so has part: feature:4830739-4830882:1:exon
so has part: feature:4831552-4831886:1:exon
so has part: feature:4835636-4835717:1:exon
so has part: feature:4837008-4837424:1:exon
so has part: feature:4837761-4838492:1:exon
so has part: feature:4839669-4839776:1:exon
so has part: feature:4841022-4841207:1:exon
so has part: feature:4841291-4841335:1:exon

XP_029122995.1
type: Protein
SIO_000068: ncbiprotein

position:4841335:1
position: 4841335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4830739-4830882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4831552-4831886:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4835636-4835717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4837008-4837424:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4837761-4838492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4839669-4839776:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4841022-4841207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4841291-4841335:1:exon

LOC105053570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P-loop NTPase domain-containing protein LPA1 isoform X1
translation: MAEFPKLLYMVVVDEGGDGKESSSFRYTRPVLQSTLQLMGCKARHAFKISQRVYEVIRTVCPADLWFPHGAKISKSDVSGSPSGRQNDFKQSNCLGEGNVTYHSAQENVETSSSMAFALYKRQTTIVVKREKFLNVICSVLSEYKYVGPNQRADLVLACRIRERKELVIVLLSGTSGCGKSTLSSLLGSRLGITTVISTDSIRHMMRSFVDEKQNPLLWASTYHAGECLDPVAVAEAKVKRKAKKPAGASYLMLKEELYDNAPTEQHDGRSPDSRLKLISKKQMAVEGFKAQSEMVIESLDQLITTWEDRKESVIIEGVHLSLNFVMGLMKKHPSVIPFMICIANEDKHMERFAIRSKYMTLDPEKNKYVKYFQNIRIIQDYLCNRADKHRVPKINNTNVDQSVATIHATVFSCLRRREAGEQLYDPATNTVPIIDEEYRNQCAANSLGSKGMFQLIQRKGSSRRLMALINKDGSVAKTWLVDGKGELLSGQDSEKCVEDPVYGLSQIGKSEPVNLQFGNFGIRGWPNDIGSTSQTASICDSGADGTDAGSRYFSSCCSSPRISEGPAKELKEESSVSVSEEADDPPDVNSGEDESEIDSKEIPEEMEGSVDEELTKSDEEFDDLAMRDMQENGYWSDDEKEPGDVHRPTAENKLTETCSEMIAGDDLKMQGCMKTRRKKYS
SIO_010081: LOC105053570
subclass of: SO_0000673
so part of: LOC105053570
location: join(4830739..4830882,4831552..4831886,4835636..4835717,4837008..4837424,4837761..4838492,4839669..4839776,4841022..4841207,4841291..4841335)
location: region:4830739-4841335:1
so has part: feature:4830739-4830882:1:exon
so has part: feature:4831552-4831886:1:exon
so has part: feature:4835636-4835717:1:exon
so has part: feature:4837008-4837424:1:exon
so has part: feature:4837761-4838492:1:exon
so has part: feature:4839669-4839776:1:exon
so has part: feature:4841022-4841207:1:exon
so has part: feature:4841291-4841335:1:exon

XP_029122996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4830739-4830882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4831552-4831886:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4835636-4835717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4837008-4837424:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4837761-4838492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4839669-4839776:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4841022-4841207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4841291-4841335:1:exon

LOC105053570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P-loop NTPase domain-containing protein LPA1 isoform X1
translation: MAEFPKLLYMVVVDEGGDGKESSSFRYTRPVLQSTLQLMGCKARHAFKISQRVYEVIRTVCPADLWFPHGAKISKSDVSGSPSGRQNDFKQSNCLGEGNVTYHSAQENVETSSSMAFALYKRQTTIVVKREKFLNVICSVLSEYKYVGPNQRADLVLACRIRERKELVIVLLSGTSGCGKSTLSSLLGSRLGITTVISTDSIRHMMRSFVDEKQNPLLWASTYHAGECLDPVAVAEAKVKRKAKKPAGASYLMLKEELYDNAPTEQHDGRSPDSRLKLISKKQMAVEGFKAQSEMVIESLDQLITTWEDRKESVIIEGVHLSLNFVMGLMKKHPSVIPFMICIANEDKHMERFAIRSKYMTLDPEKNKYVKYFQNIRIIQDYLCNRADKHRVPKINNTNVDQSVATIHATVFSCLRRREAGEQLYDPATNTVPIIDEEYRNQCAANSLGSKGMFQLIQRKGSSRRLMALINKDGSVAKTWLVDGKGELLSGQDSEKCVEDPVYGLSQIGKSEPVNLQFGNFGIRGWPNDIGSTSQTASICDSGADGTDAGSRYFSSCCSSPRISEGPAKELKEESSVSVSEEADDPPDVNSGEDESEIDSKEIPEEMEGSVDEELTKSDEEFDDLAMRDMQENGYWSDDEKEPGDVHRPTAENKLTETCSEMIAGDDLKMQGCMKTRRKKYS
SIO_010081: LOC105053570
subclass of: SO_0000673
so part of: LOC105053570
location: join(4830739..4830882,4831552..4831886,4835636..4835717,4837008..4837424,4837761..4838492,4839669..4839776,4841022..4841207,4841291..4841335)
location: region:4830739-4841335:1
so has part: feature:4830739-4830882:1:exon
so has part: feature:4831552-4831886:1:exon
so has part: feature:4835636-4835717:1:exon
so has part: feature:4837008-4837424:1:exon
so has part: feature:4837761-4838492:1:exon
so has part: feature:4839669-4839776:1:exon
so has part: feature:4841022-4841207:1:exon
so has part: feature:4841291-4841335:1:exon

XP_029122997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4830739-4830882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4831552-4831886:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4835636-4835717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4837008-4837424:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4837761-4838492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4839669-4839776:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4841022-4841207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4841291-4841335:1:exon

LOC105053570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P-loop NTPase domain-containing protein LPA1 isoform X1
translation: MAEFPKLLYMVVVDEGGDGKESSSFRYTRPVLQSTLQLMGCKARHAFKISQRVYEVIRTVCPADLWFPHGAKISKSDVSGSPSGRQNDFKQSNCLGEGNVTYHSAQENVETSSSMAFALYKRQTTIVVKREKFLNVICSVLSEYKYVGPNQRADLVLACRIRERKELVIVLLSGTSGCGKSTLSSLLGSRLGITTVISTDSIRHMMRSFVDEKQNPLLWASTYHAGECLDPVAVAEAKVKRKAKKPAGASYLMLKEELYDNAPTEQHDGRSPDSRLKLISKKQMAVEGFKAQSEMVIESLDQLITTWEDRKESVIIEGVHLSLNFVMGLMKKHPSVIPFMICIANEDKHMERFAIRSKYMTLDPEKNKYVKYFQNIRIIQDYLCNRADKHRVPKINNTNVDQSVATIHATVFSCLRRREAGEQLYDPATNTVPIIDEEYRNQCAANSLGSKGMFQLIQRKGSSRRLMALINKDGSVAKTWLVDGKGELLSGQDSEKCVEDPVYGLSQIGKSEPVNLQFGNFGIRGWPNDIGSTSQTASICDSGADGTDAGSRYFSSCCSSPRISEGPAKELKEESSVSVSEEADDPPDVNSGEDESEIDSKEIPEEMEGSVDEELTKSDEEFDDLAMRDMQENGYWSDDEKEPGDVHRPTAENKLTETCSEMIAGDDLKMQGCMKTRRKKYS
SIO_010081: LOC105053570
subclass of: SO_0000673
so part of: LOC105053570
location: join(4830739..4830882,4831552..4831886,4835636..4835717,4837008..4837424,4837761..4838492,4839669..4839776,4841022..4841207,4841291..4841335)
location: region:4830739-4841335:1
so has part: feature:4830739-4830882:1:exon
so has part: feature:4831552-4831886:1:exon
so has part: feature:4835636-4835717:1:exon
so has part: feature:4837008-4837424:1:exon
so has part: feature:4837761-4838492:1:exon
so has part: feature:4839669-4839776:1:exon
so has part: feature:4841022-4841207:1:exon
so has part: feature:4841291-4841335:1:exon

XP_029122999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4830739-4830882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4831552-4831886:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4835636-4835717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4837008-4837424:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4837761-4838492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4839669-4839776:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4841022-4841207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4841291-4841335:1:exon

LOC105053570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P-loop NTPase domain-containing protein LPA1 isoform X2
translation: MAEFPKLLYMVVVDEGGDGKESSSFRYTRPVLQSTLQLMGCKARHAFKISQRVYEVIRTVCPADLWFPHGAKISKSDVSGSPSGRQNDFKQSNCLGEGNVTYHSAQENVETSSSMAFALYKRQTTIVVKREKFLNVICSVLSEYKYVGPNQRADLVLACRIRERKELVIVLLSGTSGCGKSTLSSLLGSRLGITTVISTDSIRHMMRSFVDEKQNPLLWASTYHAGECLDPVAVAEAKVKRKAKKPAGASYLMLKEELYDNAPTEQHDGRSPDSRLKLISKKQMAVEGFKAQSEMVIESLDQLITTWEDRKESVIIEGVHLSLNFVMGLMKKHPSVIPFMICIANEDKHMERFAIRSKYMTLDPEKNKYVKYFQNIRIIQDYLCNRADKHRVPKINNTNVDQSVATIHATVFSCLRRREAGEQLYDPATNTVPIIDEEYRNQCAANSLGSKGMFQLIQRKGSSRRLMALINKDGSVAKTWLVDGKGELLSGQDSEKCVEDPVYGLSQIGKSEPVNLQFGNFGIRGWPNDIGSTSQTASICDSGADGTDAGSRYFSSCCSSPRISEGPAKELKEESSVSVSEEADDPPDVNSGEDESEIDSKEIPEEMEGSVDEELTKSDEEFDDLAMRDMQENGYWSDDEKEPGDVHRPTAENKLTETCSEMIAGDDLGCMKTRRKKYS
SIO_010081: LOC105053570
subclass of: SO_0000673
so part of: LOC105053570
location: join(4830739..4830882,4831552..4831886,4835636..4835717,4837008..4837424,4837761..4838492,4839669..4839776,4841022..4841207,4841300..4841335)
location: region:4830739-4841335:1
so has part: feature:4830739-4830882:1:exon
so has part: feature:4831552-4831886:1:exon
so has part: feature:4835636-4835717:1:exon
so has part: feature:4837008-4837424:1:exon
so has part: feature:4837761-4838492:1:exon
so has part: feature:4839669-4839776:1:exon
so has part: feature:4841022-4841207:1:exon
so has part: feature:4841300-4841335:1:exon

XP_029123000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4830739-4830882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4831552-4831886:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4835636-4835717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4837008-4837424:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4837761-4838492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4839669-4839776:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4841022-4841207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4841300-4841335:1:exon

LOC105053569
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4875693..4895853)
location: region:4875693-4895853:-1
so has part: feature:4875693-4895853:-1:exon
subclass of: SO_0000010

105053569
type: Gene
SIO_000068: ncbigene

position:4875693:-1
position: 4875693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4895853:-1
position: 4895853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4875693-4895853:-1:exon

LOC105053569
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053569
product: amino acid transporter AVT1C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_010934782.2
SIO_010081: LOC105053569
subclass of: SO_0000673
so part of: LOC105053569
location: complement(join(4875693..4876057,4877555..4877617,4877703..4877746,4878040..4878185,4878945..4878964,4879558..4879693,4879820..4880039,4880766..4880946,4888774..4888797,4888903..4889117,4891796..4892145,4895139..4895352,4895713..4895853))
location: region:4875693-4895853:-1
so has part: feature:4895713-4895853:-1:exon
so has part: feature:4895139-4895352:-1:exon
so has part: feature:4891796-4892145:-1:exon
so has part: feature:4888903-4889117:-1:exon
so has part: feature:4888774-4888797:-1:exon
so has part: feature:4880766-4880946:-1:exon
so has part: feature:4879820-4880039:-1:exon
so has part: feature:4879558-4879693:-1:exon
so has part: feature:4878945-4878964:-1:exon
so has part: feature:4878040-4878185:-1:exon
so has part: feature:4877703-4877746:-1:exon
so has part: feature:4877555-4877617:-1:exon
so has part: feature:4875693-4876057:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4895713-4895853:-1:exon

position:4895713:-1
position: 4895713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4895139-4895352:-1:exon

position:4895139:-1
position: 4895139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4895352:-1
position: 4895352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4891796-4892145:-1:exon

position:4891796:-1
position: 4891796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4892145:-1
position: 4892145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4888903-4889117:-1:exon

position:4888903:-1
position: 4888903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4889117:-1
position: 4889117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4888774-4888797:-1:exon

position:4888774:-1
position: 4888774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4888797:-1
position: 4888797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4880766-4880946:-1:exon

position:4880766:-1
position: 4880766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4880946:-1
position: 4880946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4879820-4880039:-1:exon

position:4879820:-1
position: 4879820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4880039:-1
position: 4880039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4879558-4879693:-1:exon

position:4879558:-1
position: 4879558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4879693:-1
position: 4879693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4878945-4878964:-1:exon

position:4878945:-1
position: 4878945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4878964:-1
position: 4878964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4878040-4878185:-1:exon

position:4878040:-1
position: 4878040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4878185:-1
position: 4878185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4877703-4877746:-1:exon

position:4877703:-1
position: 4877703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4877746:-1
position: 4877746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4877555-4877617:-1:exon

position:4877555:-1
position: 4877555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4877617:-1
position: 4877617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4875693-4876057:-1:exon

position:4876057:-1
position: 4876057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053569
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053569
product: amino acid transporter AVT1C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_019853811.2
SIO_010081: LOC105053569
subclass of: SO_0000673
so part of: LOC105053569
location: complement(join(4875693..4876057,4877555..4877617,4877703..4877746,4878040..4878185,4878945..4878964,4879558..4879693,4879820..4880039,4880766..4880946,4888774..4888797,4888903..4889117,4891796..4892145,4895139..4895671))
location: region:4875693-4895671:-1
so has part: feature:4895139-4895671:-1:exon
so has part: feature:4891796-4892145:-1:exon
so has part: feature:4888903-4889117:-1:exon
so has part: feature:4888774-4888797:-1:exon
so has part: feature:4880766-4880946:-1:exon
so has part: feature:4879820-4880039:-1:exon
so has part: feature:4879558-4879693:-1:exon
so has part: feature:4878945-4878964:-1:exon
so has part: feature:4878040-4878185:-1:exon
so has part: feature:4877703-4877746:-1:exon
so has part: feature:4877555-4877617:-1:exon
so has part: feature:4875693-4876057:-1:exon

position:4895671:-1
position: 4895671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4895139-4895671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4891796-4892145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4888903-4889117:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4888774-4888797:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4880766-4880946:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4879820-4880039:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4879558-4879693:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4878945-4878964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4878040-4878185:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4877703-4877746:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4877555-4877617:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4875693-4876057:-1:exon

LOC105053569
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105053569
product: amino acid transporter AVT1C, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_003802095.1
SIO_010081: LOC105053569
so part of: LOC105053569
location: complement(join(4875722..4876057,4877555..4877617,4877703..4877746,4878813..4878964,4879558..4879693,4879820..4880039,4880766..4880946,4888774..4888797,4888903..4889117,4891796..4892145,4895139..4895352,4895713..4895853))
location: region:4875722-4895853:-1
so has part: feature:4895713-4895853:-1:exon
so has part: feature:4895139-4895352:-1:exon
so has part: feature:4891796-4892145:-1:exon
so has part: feature:4888903-4889117:-1:exon
so has part: feature:4888774-4888797:-1:exon
so has part: feature:4880766-4880946:-1:exon
so has part: feature:4879820-4880039:-1:exon
so has part: feature:4879558-4879693:-1:exon
so has part: feature:4878813-4878964:-1:exon
so has part: feature:4877703-4877746:-1:exon
so has part: feature:4877555-4877617:-1:exon
so has part: feature:4875722-4876057:-1:exon

position:4875722:-1
position: 4875722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4895713-4895853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4895139-4895352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4891796-4892145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4888903-4889117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4888774-4888797:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4880766-4880946:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4879820-4880039:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4879558-4879693:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4878813-4878964:-1:exon

position:4878813:-1
position: 4878813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4877703-4877746:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4877555-4877617:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4875722-4876057:-1:exon

LOC105053569
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amino acid transporter AVT1C
translation: MKNSVSDRDLFIDSEEEEDDEVVDEEEGGKYRAQDEEGDESDGSDSSSPRHSSRPSSYNTTWPQSYRQSMDMYSSVTPPTIGLLGTPTLGRLSSSFITSSFRGKHTPEIITSLIKPLLSTSTVDQQQEGGEERKSSHSLLLPPPIPTRRPSAKKIIRDDHKPHKVSHELPVSHQCSYGQAVLNGINVLCGVGILSTPYAVKEGGWIGLSILLIFAVLAWYTGILLRYCLDSEPGLQTYPDIGQAAFGTTGRFAVSIILYLELYGCCVEYIILESDNLSSLFPNAHLDIGGLHLNSHLLFAIMAAAIVLPTTWLQDLSILSYISAGGVIASLLVVFSLFWVGLVDQVDFQNGGTSLNLSGIPIAIGLYGYCYSGHAVFPNIYSSLKKPNQYPSVLFTSFAICTVMFAGAAVMGYIMFGDSTLSQFTLNMPHDLVMSRVAVWTTVVNPLTKYALTLTPMALSLEELIPANHVKSHMYAIIIRTTLVVSTLLVALSVPFFGLVMSLIGSLLTMLVTLILPCACFLSILRGKVAWTQVSLCMFIIIVGVVSCAFGTFSAISKIIQSLS
SIO_010081: LOC105053569
subclass of: SO_0000673
so part of: LOC105053569
location: complement(join(4875962..4876057,4877555..4877617,4877703..4877746,4878040..4878185,4878945..4878964,4879558..4879693,4879820..4880039,4880766..4880946,4888774..4888797,4888903..4889117,4891796..4892145,4895139..4895338))
location: region:4875962-4895338:-1
so has part: feature:4895139-4895338:-1:exon
so has part: feature:4891796-4892145:-1:exon
so has part: feature:4888903-4889117:-1:exon
so has part: feature:4888774-4888797:-1:exon
so has part: feature:4880766-4880946:-1:exon
so has part: feature:4879820-4880039:-1:exon
so has part: feature:4879558-4879693:-1:exon
so has part: feature:4878945-4878964:-1:exon
so has part: feature:4878040-4878185:-1:exon
so has part: feature:4877703-4877746:-1:exon
so has part: feature:4877555-4877617:-1:exon
so has part: feature:4875962-4876057:-1:exon

XP_019709370.1
type: Protein
SIO_000068: ncbiprotein

position:4875962:-1
position: 4875962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4895338:-1
position: 4895338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4895139-4895338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4891796-4892145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4888903-4889117:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4888774-4888797:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4880766-4880946:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4879820-4880039:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4879558-4879693:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4878945-4878964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4878040-4878185:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4877703-4877746:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4877555-4877617:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4875962-4876057:-1:exon

LOC105053569
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amino acid transporter AVT1C
translation: MKNSVSDRDLFIDSEEEEDDEVVDEEEGGKYRAQDEEGDESDGSDSSSPRHSSRPSSYNTTWPQSYRQSMDMYSSVTPPTIGLLGTPTLGRLSSSFITSSFRGKHTPEIITSLIKPLLSTSTVDQQQEGGEERKSSHSLLLPPPIPTRRPSAKKIIRDDHKPHKVSHELPVSHQCSYGQAVLNGINVLCGVGILSTPYAVKEGGWIGLSILLIFAVLAWYTGILLRYCLDSEPGLQTYPDIGQAAFGTTGRFAVSIILYLELYGCCVEYIILESDNLSSLFPNAHLDIGGLHLNSHLLFAIMAAAIVLPTTWLQDLSILSYISAGGVIASLLVVFSLFWVGLVDQVDFQNGGTSLNLSGIPIAIGLYGYCYSGHAVFPNIYSSLKKPNQYPSVLFTSFAICTVMFAGAAVMGYIMFGDSTLSQFTLNMPHDLVMSRVAVWTTVVNPLTKYALTLTPMALSLEELIPANHVKSHMYAIIIRTTLVVSTLLVALSVPFFGLVMSLIGSLLTMLVTLILPCACFLSILRGKVAWTQVSLCMFIIIVGVVSCAFGTFSAISKIIQSLS
SIO_010081: LOC105053569
subclass of: SO_0000673
so part of: LOC105053569
location: complement(join(4875962..4876057,4877555..4877617,4877703..4877746,4878040..4878185,4878945..4878964,4879558..4879693,4879820..4880039,4880766..4880946,4888774..4888797,4888903..4889117,4891796..4892145,4895139..4895338))
location: region:4875962-4895338:-1
so has part: feature:4895139-4895338:-1:exon
so has part: feature:4891796-4892145:-1:exon
so has part: feature:4888903-4889117:-1:exon
so has part: feature:4888774-4888797:-1:exon
so has part: feature:4880766-4880946:-1:exon
so has part: feature:4879820-4880039:-1:exon
so has part: feature:4879558-4879693:-1:exon
so has part: feature:4878945-4878964:-1:exon
so has part: feature:4878040-4878185:-1:exon
so has part: feature:4877703-4877746:-1:exon
so has part: feature:4877555-4877617:-1:exon
so has part: feature:4875962-4876057:-1:exon

XP_010933084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4895139-4895338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4891796-4892145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4888903-4889117:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4888774-4888797:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4880766-4880946:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4879820-4880039:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4879558-4879693:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4878945-4878964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4878040-4878185:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4877703-4877746:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4877555-4877617:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4875962-4876057:-1:exon

LOC105053569
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105053569
product: amino acid transporter AVT1C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_002165740.2
SIO_010081: LOC105053569
so part of: LOC105053569
location: complement(join(4877703..4877746,4878040..4878192,4878381..4878541,4878813..4878964,4879558..4879693,4879820..4880039,4880766..4880946,4888774..4888797,4888903..4889117,4891796..4892145,4895139..4895352,4895713..4895853))
location: region:4877703-4895853:-1
so has part: feature:4895713-4895853:-1:exon
so has part: feature:4895139-4895352:-1:exon
so has part: feature:4891796-4892145:-1:exon
so has part: feature:4888903-4889117:-1:exon
so has part: feature:4888774-4888797:-1:exon
so has part: feature:4880766-4880946:-1:exon
so has part: feature:4879820-4880039:-1:exon
so has part: feature:4879558-4879693:-1:exon
so has part: feature:4878813-4878964:-1:exon
so has part: feature:4878381-4878541:-1:exon
so has part: feature:4878040-4878192:-1:exon
so has part: feature:4877703-4877746:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4895713-4895853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4895139-4895352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4891796-4892145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4888903-4889117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4888774-4888797:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4880766-4880946:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4879820-4880039:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4879558-4879693:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4878813-4878964:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4878381-4878541:-1:exon

position:4878381:-1
position: 4878381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4878541:-1
position: 4878541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4878040-4878192:-1:exon

position:4878192:-1
position: 4878192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4877703-4877746:-1:exon

LOC105053567
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053567
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5246019..5257346
location: region:5246019-5257346:1
so has part: feature:5246019-5257346:1:exon
subclass of: SO_0000010

105053567
type: Gene
SIO_000068: ncbigene

position:5246019:1
position: 5246019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5257346:1
position: 5257346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5246019-5257346:1:exon

LOC105053567
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053567
product: SNF1-related protein kinase regulatory subunit beta-3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_010934780.3
SIO_010081: LOC105053567
subclass of: SO_0000673
so part of: LOC105053567
location: join(5246019..5246222,5256525..5256594,5256664..5257346)
location: region:5246019-5257346:1
so has part: feature:5246019-5246222:1:exon
so has part: feature:5256525-5256594:1:exon
so has part: feature:5256664-5257346:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5246019-5246222:1:exon

position:5246222:1
position: 5246222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5256525-5256594:1:exon

position:5256525:1
position: 5256525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5256594:1
position: 5256594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5256664-5257346:1:exon

position:5256664:1
position: 5256664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053567
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053567
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SNF1-related protein kinase regulatory subunit beta-3
translation: MDGPSRDDHEGVTVVGFEVPRSPDSSYNNPIPGNEDEAREPPVVPPHLQHSLLRFPPSQDDSSSLPLPQNVILNHLYIENRESPRSVVALGITHRFRSKFVTVVLYKPVQR
SIO_010081: LOC105053567
subclass of: SO_0000673
so part of: LOC105053567
location: join(5256568..5256594,5256664..5256972)
location: region:5256568-5256972:1
so has part: feature:5256568-5256594:1:exon
so has part: feature:5256664-5256972:1:exon

XP_010933082.1
type: Protein
SIO_000068: ncbiprotein

position:5256568:1
position: 5256568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5256972:1
position: 5256972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5256568-5256594:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5256664-5256972:1:exon

LOC114914630
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC114914630
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5262849..5263774
location: region:5262849-5263774:1
so has part: feature:5262849-5263774:1:exon
subclass of: SO_0000010

114914630
type: Gene
SIO_000068: ncbigene

position:5262849:1
position: 5262849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5263774:1
position: 5263774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5262849-5263774:1:exon

LOC114914630
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC114914630
product: uncharacterized LOC114914630
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029267412.1
SIO_010081: LOC114914630
subclass of: SO_0000673
so part of: LOC114914630
location: join(5262849..5263141,5263524..5263774)
location: region:5262849-5263774:1
so has part: feature:5262849-5263141:1:exon
so has part: feature:5263524-5263774:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5262849-5263141:1:exon

position:5263141:1
position: 5263141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5263524-5263774:1:exon

position:5263524:1
position: 5263524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC114914630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC114914630
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC114914630
translation: MSTLLATAFLFLILSSPPGLGVDGNFSACVAATMRPVNSKQREHVKLRSYPRPKHRFVSSRDISGCKPRVFRPPPSAPSRRRRWSVFLWQNWKDSGTLLAWSWWVRVVSFKGKIDPSSFRTLSVRSASHRSESTPKLQIHQAARLLKRRLRDPSVDSREGK
SIO_010081: LOC114914630
subclass of: SO_0000673
so part of: LOC114914630
location: join(5262903..5263141,5263524..5263770)
location: region:5262903-5263770:1
so has part: feature:5262903-5263141:1:exon
so has part: feature:5263524-5263770:1:exon

XP_029123245.1
type: Protein
SIO_000068: ncbiprotein

position:5262903:1
position: 5262903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5263770:1
position: 5263770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5262903-5263141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5263524-5263770:1:exon

LOC114914649
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC114914649
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(5276373..5276479)
location: region:5276373-5276479:-1
so has part: feature:5276373-5276479:-1:exon
subclass of: SO_0000578

114914649
type: Gene
SIO_000068: ncbigene

position:5276373:-1
position: 5276373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5276479:-1
position: 5276479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5276373-5276479:-1:exon

LOC114914649
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51953
nc RNA class: snoRNA
gene: LOC114914649
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003802188.1
SIO_010081: LOC114914649
subclass of: SO_0000673
so part of: LOC114914649
location: complement(5276373..5276479)
location: region:5276373-5276479:-1
so has part: feature:5276373-5276479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5276373-5276479:-1:exon

LOC105053566
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053566
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5351081..5362349)
location: region:5351081-5362349:-1
so has part: feature:5351081-5362349:-1:exon
subclass of: SO_0000010

105053566
type: Gene
SIO_000068: ncbigene

position:5351081:-1
position: 5351081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5362349:-1
position: 5362349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5351081-5362349:-1:exon

LOC105053566
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053566
product: cell division cycle protein 48 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_010934779.3
SIO_010081: LOC105053566
subclass of: SO_0000673
so part of: LOC105053566
location: complement(join(5351081..5351564,5352320..5352679,5352769..5353050,5353141..5353212,5353341..5353562,5353654..5354420,5361255..5361483,5361903..5362068,5362186..5362349))
location: region:5351081-5362349:-1
so has part: feature:5362186-5362349:-1:exon
so has part: feature:5361903-5362068:-1:exon
so has part: feature:5361255-5361483:-1:exon
so has part: feature:5353654-5354420:-1:exon
so has part: feature:5353341-5353562:-1:exon
so has part: feature:5353141-5353212:-1:exon
so has part: feature:5352769-5353050:-1:exon
so has part: feature:5352320-5352679:-1:exon
so has part: feature:5351081-5351564:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5362186-5362349:-1:exon

position:5362186:-1
position: 5362186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5361903-5362068:-1:exon

position:5361903:-1
position: 5361903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5362068:-1
position: 5362068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5361255-5361483:-1:exon

position:5361255:-1
position: 5361255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5361483:-1
position: 5361483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5353654-5354420:-1:exon

position:5353654:-1
position: 5353654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5354420:-1
position: 5354420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5353341-5353562:-1:exon

position:5353341:-1
position: 5353341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5353562:-1
position: 5353562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5353141-5353212:-1:exon

position:5353141:-1
position: 5353141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5353212:-1
position: 5353212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5352769-5353050:-1:exon

position:5352769:-1
position: 5352769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5353050:-1
position: 5353050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5352320-5352679:-1:exon

position:5352320:-1
position: 5352320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5352679:-1
position: 5352679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5351081-5351564:-1:exon

position:5351564:-1
position: 5351564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053566
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053566
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division cycle protein 48 homolog
translation: MASKGEASSSSDPKGAKKDFSTAILERKKAPNRLIVDEAINDDNSVVSMNPETMEKLQLFRGDTILLKGKKRRDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCQDVKYGKRVHILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDESIDAEVLNSMAVTNEHFKTALGTSNPSALRETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEASRYQIFKACLRKSPVSKDVDLGALAKYTHGFSGADITEICQRACKYAIRENIEKDIERERRRSENPEAMEEDEADEVAEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSERSETGAGAAGSDPFASTVAGADDDDLYN
SIO_010081: LOC105053566
subclass of: SO_0000673
so part of: LOC105053566
location: complement(join(5351265..5351564,5352320..5352679,5352769..5353050,5353141..5353212,5353341..5353562,5353654..5354420,5361255..5361483,5361903..5362068,5362186..5362223))
location: region:5351265-5362223:-1
so has part: feature:5362186-5362223:-1:exon
so has part: feature:5361903-5362068:-1:exon
so has part: feature:5361255-5361483:-1:exon
so has part: feature:5353654-5354420:-1:exon
so has part: feature:5353341-5353562:-1:exon
so has part: feature:5353141-5353212:-1:exon
so has part: feature:5352769-5353050:-1:exon
so has part: feature:5352320-5352679:-1:exon
so has part: feature:5351265-5351564:-1:exon

XP_010933081.1
type: Protein
SIO_000068: ncbiprotein

position:5351265:-1
position: 5351265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5362223:-1
position: 5362223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5362186-5362223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5361903-5362068:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5361255-5361483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5353654-5354420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5353341-5353562:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5353141-5353212:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5352769-5353050:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5352320-5352679:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5351265-5351564:-1:exon

LOC105053565
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5369692..5377331)
location: region:5369692-5377331:-1
so has part: feature:5369692-5377331:-1:exon
subclass of: SO_0000010

105053565
type: Gene
SIO_000068: ncbigene

position:5369692:-1
position: 5369692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5377331:-1
position: 5377331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5369692-5377331:-1:exon

LOC105053565
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053565
product: ras-related protein RABF1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_010934778.3
SIO_010081: LOC105053565
subclass of: SO_0000673
so part of: LOC105053565
location: complement(join(5369692..5370099,5370982..5371068,5371160..5371249,5373473..5373578,5373669..5373763,5373968..5374051,5375814..5375890,5377091..5377331))
location: region:5369692-5377331:-1
so has part: feature:5377091-5377331:-1:exon
so has part: feature:5375814-5375890:-1:exon
so has part: feature:5373968-5374051:-1:exon
so has part: feature:5373669-5373763:-1:exon
so has part: feature:5373473-5373578:-1:exon
so has part: feature:5371160-5371249:-1:exon
so has part: feature:5370982-5371068:-1:exon
so has part: feature:5369692-5370099:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5377091-5377331:-1:exon

position:5377091:-1
position: 5377091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5375814-5375890:-1:exon

position:5375814:-1
position: 5375814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5375890:-1
position: 5375890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5373968-5374051:-1:exon

position:5373968:-1
position: 5373968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5374051:-1
position: 5374051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5373669-5373763:-1:exon

position:5373669:-1
position: 5373669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5373763:-1
position: 5373763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5373473-5373578:-1:exon

position:5373473:-1
position: 5373473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5373578:-1
position: 5373578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5371160-5371249:-1:exon

position:5371160:-1
position: 5371160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5371249:-1
position: 5371249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5370982-5371068:-1:exon

position:5370982:-1
position: 5370982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5371068:-1
position: 5371068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5369692-5370099:-1:exon

position:5370099:-1
position: 5370099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein RABF1
translation: MGCSSSLPDRNAGRLGSLNSGNSMVTDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPESFVKAKYWVKELQKHASPDIIMALVGNKADLHENRSVSVQDAQDYAEKNGMFFIETSAKTANNINQLFEEIAKRLPRTTPSS
SIO_010081: LOC105053565
subclass of: SO_0000673
so part of: LOC105053565
location: complement(join(5370058..5370099,5370982..5371068,5371160..5371249,5373473..5373578,5373669..5373763,5373968..5374051,5375814..5375890,5377091..5377115))
location: region:5370058-5377115:-1
so has part: feature:5377091-5377115:-1:exon
so has part: feature:5375814-5375890:-1:exon
so has part: feature:5373968-5374051:-1:exon
so has part: feature:5373669-5373763:-1:exon
so has part: feature:5373473-5373578:-1:exon
so has part: feature:5371160-5371249:-1:exon
so has part: feature:5370982-5371068:-1:exon
so has part: feature:5370058-5370099:-1:exon

XP_010933080.1
type: Protein
SIO_000068: ncbiprotein

position:5370058:-1
position: 5370058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5377115:-1
position: 5377115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5377091-5377115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5375814-5375890:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5373968-5374051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5373669-5373763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5373473-5373578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5371160-5371249:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5370982-5371068:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5370058-5370099:-1:exon

LOC105053576
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5379500..5381721
location: region:5379500-5381721:1
so has part: feature:5379500-5381721:1:exon

105053576
type: Gene
SIO_000068: ncbigene

position:5379500:1
position: 5379500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5381721:1
position: 5381721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5379500-5381721:1:exon

LOC105053576
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053576
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105053576
subclass of: SO_0000673
so part of: LOC105053576
location: 5379500..5379553
location: region:5379500-5379553:1
so has part: feature:5379500-5379553:1:exon

position:5379553:1
position: 5379553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5379500-5379553:1:exon

LOC105053576
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC105053576
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105053576
subclass of: SO_0000673
so part of: LOC105053576
location: 5381207..5381721
location: region:5381207-5381721:1
so has part: feature:5381207-5381721:1:exon

position:5381207:1
position: 5381207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5381207-5381721:1:exon

LOC105053564
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053564
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5413784..5458480
location: region:5413784-5458480:1
so has part: feature:5413784-5458480:1:exon
subclass of: SO_0000010

105053564
type: Gene
SIO_000068: ncbigene

position:5413784:1
position: 5413784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5458480:1
position: 5458480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5413784-5458480:1:exon

LOC105053564
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053564
product: vacuolar protein sorting-associated protein 54, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_010934776.3
SIO_010081: LOC105053564
subclass of: SO_0000673
so part of: LOC105053564
location: join(5413784..5414870,5420478..5420540,5421061..5421140,5428113..5428230,5429895..5429969,5434382..5434538,5434648..5434736,5435434..5435696,5437844..5438015,5438110..5438193,5438352..5438713,5439078..5439231,5441221..5441302,5442765..5442844,5448248..5448409,5450637..5450704,5454122..5454202,5454299..5454555,5457975..5458480)
location: region:5413784-5458480:1
so has part: feature:5413784-5414870:1:exon
so has part: feature:5420478-5420540:1:exon
so has part: feature:5421061-5421140:1:exon
so has part: feature:5428113-5428230:1:exon
so has part: feature:5429895-5429969:1:exon
so has part: feature:5434382-5434538:1:exon
so has part: feature:5434648-5434736:1:exon
so has part: feature:5435434-5435696:1:exon
so has part: feature:5437844-5438015:1:exon
so has part: feature:5438110-5438193:1:exon
so has part: feature:5438352-5438713:1:exon
so has part: feature:5439078-5439231:1:exon
so has part: feature:5441221-5441302:1:exon
so has part: feature:5442765-5442844:1:exon
so has part: feature:5448248-5448409:1:exon
so has part: feature:5450637-5450704:1:exon
so has part: feature:5454122-5454202:1:exon
so has part: feature:5454299-5454555:1:exon
so has part: feature:5457975-5458480:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5413784-5414870:1:exon

position:5414870:1
position: 5414870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5420478-5420540:1:exon

position:5420478:1
position: 5420478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5420540:1
position: 5420540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5421061-5421140:1:exon

position:5421061:1
position: 5421061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5421140:1
position: 5421140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5428113-5428230:1:exon

position:5428113:1
position: 5428113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5428230:1
position: 5428230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5429895-5429969:1:exon

position:5429895:1
position: 5429895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5429969:1
position: 5429969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5434382-5434538:1:exon

position:5434382:1
position: 5434382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5434538:1
position: 5434538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5434648-5434736:1:exon

position:5434648:1
position: 5434648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5434736:1
position: 5434736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5435434-5435696:1:exon

position:5435434:1
position: 5435434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5435696:1
position: 5435696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5437844-5438015:1:exon

position:5437844:1
position: 5437844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5438015:1
position: 5438015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5438110-5438193:1:exon

position:5438110:1
position: 5438110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5438193:1
position: 5438193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5438352-5438713:1:exon

position:5438352:1
position: 5438352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5438713:1
position: 5438713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5439078-5439231:1:exon

position:5439078:1
position: 5439078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5439231:1
position: 5439231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5441221-5441302:1:exon

position:5441221:1
position: 5441221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5441302:1
position: 5441302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5442765-5442844:1:exon

position:5442765:1
position: 5442765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5442844:1
position: 5442844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5448248-5448409:1:exon

position:5448248:1
position: 5448248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5448409:1
position: 5448409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5450637-5450704:1:exon

position:5450637:1
position: 5450637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5450704:1
position: 5450704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5454122-5454202:1:exon

position:5454122:1
position: 5454122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5454202:1
position: 5454202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5454299-5454555:1:exon

position:5454299:1
position: 5454299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5454555:1
position: 5454555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5457975-5458480:1:exon

position:5457975:1
position: 5457975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053564
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053564
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 54, chloroplastic
translation: MEAPPFQPGRPPLRTAPDGLPRSREPINLGRSSSASSRSDFDSPSASTAAVSQSLSSILNNPHAGRSDATWSLWWPSTSAVALDSPPPLVPSIPLPEVSRADFQPYLSAIFESYSRFEDVRNHSSKETAAAAGDGEVRGQGEALVACLREVPSLFFKVDFALEEGTTFQAACPFSPSAQENTALQERLTQYLDVVEMHLVREISLRSDSFFEAQGQLQGLNGEIVEACARIRELRETIRILTGDVVGTAREVQELNATRGNLVALQQKLSVILYVSQALSALKLLVAAADCAGALDVTDDLQHLLETDELAGLHCFRHLRDQLATSLDSVNSILSAEFLRAAINDAKTNDKVILSKLKTKAGSLINGMEDEVRLDDDERSILRDRLLPLIICLLRTGKLPAVLRIYRDALITDMKAAIKTTVAELLPVLVAQPLDSDLVAGERAVDSDGGGLSLASKLRNLSSESFVQLLAAIFKVIEAHLMQAAEVKKVIEWIMGNLDGCYATDSVAVAVAHGAAAAAAAEAAQETDTTVVPHISHSLPRNAPKIPLFQGKTNDGSSPNTPKNFRADVLRENTEAVFAACDAAHGRWAKLLGVRALLHPRLRLQEFLSIYNITQDFIAATEKIGGRLGYSIRGTLQSQSKAFVDFQHESRMAKIKAVLDQETWVTVDVPDEFQAIVVSLSSMGNGELGPDILSSEMVESGVSSGEQYFRMNESGEHGANPSNRTLPLSSNQEIRAEPTPSVRNDDSTVKEHGRSTSQTLIYGGIGYHMVNCGLILLKMLSEYVDISKCLPALSSEVVHRVVEILKLFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQIISFIYAITPDIRRVLFSKIPEARKALLMSEIDRVAQDYKIHRDEIHTKLVQIMRERLLANLRKLPQIVESWNAPEDNDLQPSQFARSVTKEVMYLHRILSQTLLEADVQAIFRQVVEIFHSHISEAFSKLDVSTPQAKNRLCRDVQHILGCIRKLPSDNSSKNGVPNFGLLDEFLAEKFETKVGQ
SIO_010081: LOC105053564
subclass of: SO_0000673
so part of: LOC105053564
location: join(5414019..5414870,5420478..5420540,5421061..5421140,5428113..5428230,5429895..5429969,5434382..5434538,5434648..5434736,5435434..5435696,5437844..5438015,5438110..5438193,5438352..5438713,5439078..5439231,5441221..5441302,5442765..5442844,5448248..5448409,5450637..5450704,5454122..5454202,5454299..5454437)
location: region:5414019-5454437:1
so has part: feature:5414019-5414870:1:exon
so has part: feature:5420478-5420540:1:exon
so has part: feature:5421061-5421140:1:exon
so has part: feature:5428113-5428230:1:exon
so has part: feature:5429895-5429969:1:exon
so has part: feature:5434382-5434538:1:exon
so has part: feature:5434648-5434736:1:exon
so has part: feature:5435434-5435696:1:exon
so has part: feature:5437844-5438015:1:exon
so has part: feature:5438110-5438193:1:exon
so has part: feature:5438352-5438713:1:exon
so has part: feature:5439078-5439231:1:exon
so has part: feature:5441221-5441302:1:exon
so has part: feature:5442765-5442844:1:exon
so has part: feature:5448248-5448409:1:exon
so has part: feature:5450637-5450704:1:exon
so has part: feature:5454122-5454202:1:exon
so has part: feature:5454299-5454437:1:exon

XP_010933078.1
type: Protein
SIO_000068: ncbiprotein

position:5414019:1
position: 5414019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5454437:1
position: 5454437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5414019-5414870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5420478-5420540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5421061-5421140:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5428113-5428230:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5429895-5429969:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5434382-5434538:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5434648-5434736:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5435434-5435696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5437844-5438015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5438110-5438193:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5438352-5438713:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5439078-5439231:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5441221-5441302:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5442765-5442844:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5448248-5448409:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5450637-5450704:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5454122-5454202:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5454299-5454437:1:exon

LOC105053575
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5476440..5521016)
location: region:5476440-5521016:-1
so has part: feature:5476440-5521016:-1:exon
subclass of: SO_0000010

105053575
type: Gene
SIO_000068: ncbigene

position:5476440:-1
position: 5476440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5521016:-1
position: 5521016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5476440-5521016:-1:exon

LOC105053575
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053575
product: receptor-like protein 19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_019853641.1
SIO_010081: LOC105053575
subclass of: SO_0000673
so part of: LOC105053575
location: complement(join(5476440..5476586,5520012..5521016))
location: region:5476440-5521016:-1
so has part: feature:5520012-5521016:-1:exon
so has part: feature:5476440-5476586:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5520012-5521016:-1:exon

position:5520012:-1
position: 5520012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5476440-5476586:-1:exon

position:5476586:-1
position: 5476586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-like protein 19
translation: MASNKICGEIPKSIKNLRNLVELDLSYNINISGEIPEFIGNLIHLQVLDLSSNEISSQIPKIIGNLIHLQTLDLSYNKISGKIPEFIGNLIHLQSLDLSYNKISGEIPEFIGNLIHLQELDLSGNEISGEIPKIIGNLIHLQSLDLSSNKISGEIPEFIGNLIHLQVLYLSGNEISGEIPKSIGNIIHLQVLCLSSNNISGEIPDAFDKLHSLQNLALSSNRITGKIPRSIGNLCKLNMLDISDNSITGELVDIIESWSKCTENRPDGRRSLQGLTLLYVGYNNLSGTIPQTLSQLSALQGLDLASNSFTGHLTEAHFANLTRLDYLDLSYNSFQRYYRFEALQDEEADRRTFEEVVVWRFRDGLYSLRQSVIEHSSSESPSV
SIO_010081: LOC105053575
subclass of: SO_0000673
so part of: LOC105053575
location: complement(join(5476440..5476586,5520012..5521016))
location: region:5476440-5521016:-1
so has part: feature:5520012-5521016:-1:exon
so has part: feature:5476440-5476586:-1:exon

XP_019709200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5520012-5521016:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5476440-5476586:-1:exon

LOC105053574
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5564656..5565849)
location: region:5564656-5565849:-1
so has part: feature:5564656-5565849:-1:exon
subclass of: SO_0000010

105053574
type: Gene
SIO_000068: ncbigene

position:5564656:-1
position: 5564656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5565849:-1
position: 5565849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5564656-5565849:-1:exon

LOC105053574
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053574
product: receptor-like protein EIX1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_010934789.1
SIO_010081: LOC105053574
subclass of: SO_0000673
so part of: LOC105053574
location: complement(join(5564656..5565179,5565282..5565849))
location: region:5564656-5565849:-1
so has part: feature:5565282-5565849:-1:exon
so has part: feature:5564656-5565179:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5565282-5565849:-1:exon

position:5565282:-1
position: 5565282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5564656-5565179:-1:exon

position:5565179:-1
position: 5565179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053574
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-like protein EIX1
translation: MASLEVLDLSNNGLFGELHHCRCKPQQEMIDSQQDSKLEHSSDLMACPIHLQSMHLRKNSLFGKLPSLLKYCKQLVVLDLSENRFLGDLPIWIGESLRSLRVLSFRSNFFNGSIPLQLSHLASLQVLDLACNNFSGALPPLFGNFSTMMRIQNVDKPMLSDFNAHYTEGLLITTKGMESEYTSVLALVMGKIPENIGFLRHLESLDLSVNNLSGMIPSTISSMYFLSHLNLSNNNLSGSIPWGNQLQTFCDPSIYGGNPNLHGWPLPWCFNNASSKSPFQTRAQEEKPRNGDESEMIWLYAISALGFVVGVLGFIYVLMIKRAMRNAYFHLIDMTYDYIYVQLAIRFAKLKSILPILTNNSQG
SIO_010081: LOC105053574
subclass of: SO_0000673
so part of: LOC105053574
location: complement(join(5564656..5565179,5565282..5565849))
location: region:5564656-5565849:-1
so has part: feature:5565282-5565849:-1:exon
so has part: feature:5564656-5565179:-1:exon

XP_010933091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5565282-5565849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5564656-5565179:-1:exon

LOC105053573
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053573
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5628807..5646973)
location: region:5628807-5646973:-1
so has part: feature:5628807-5646973:-1:exon
subclass of: SO_0000010

105053573
type: Gene
SIO_000068: ncbigene

position:5628807:-1
position: 5628807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5646973:-1
position: 5646973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5628807-5646973:-1:exon

LOC105053573
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053573
product: receptor-like protein 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
transcript id: XM_029267430.1
SIO_010081: LOC105053573
subclass of: SO_0000673
so part of: LOC105053573
location: complement(join(5628807..5629042,5644802..5645602,5646137..5646569,5646713..5646973))
location: region:5628807-5646973:-1
so has part: feature:5646713-5646973:-1:exon
so has part: feature:5646137-5646569:-1:exon
so has part: feature:5644802-5645602:-1:exon
so has part: feature:5628807-5629042:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5646713-5646973:-1:exon

position:5646713:-1
position: 5646713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5646137-5646569:-1:exon

position:5646137:-1
position: 5646137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5646569:-1
position: 5646569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5644802-5645602:-1:exon

position:5644802:-1
position: 5644802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5645602:-1
position: 5645602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5628807-5629042:-1:exon

position:5629042:-1
position: 5629042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053573
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053573
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-like protein 12
translation: MAVCSSWRSNASRLLMHVMLIVLFLLYLCLGGRDGSMVERSCIESERRALLSIKGDMYDPDQWLSSWKSQDYCRWRGVGCNNITGHVVLDLSDNEISGEIPEFIENLIHLQSLDLSYNKISGEIPDAFDRLHSLHYLALSSNRITGKIPRFIGNLCKLNGLDISHNSITGELVDTIESWSKCTENKPDGRRSLQGLTSLHVGYNNLSGTIPQTLSQLSALQELDLASNSFTEILDLSNNNLSGGIRLFCNGLASLEVLDLSNNELFGELHHYPYKPRYGTIDSKEDNKFEHSFDSVACPVKLQSLHLRNNRLSGKLPSWLKYCRQLLVLDLSENRFSDNLPIWIGESLRSLRVLSLRLNFFNGSIPAQLSYLTSLPVLDLACNNFSGALPPSFGNLSAMKRTQNAEKPMLTDFHAYYTEGLVMTIKGIEIEYTSVLSFVISIDLSCNNLSGTIPIELVNLHGLRFLNLSNNHFTGKIPKNIGALTQLESLDLSVNNLSGWHMHSPPDLANPMSVEAEALQSLVEKASAHLIISTLHVKLDGYKTSAIRSFEEIMRKLLHDQHVVKDVMPSNDGILL
SIO_010081: LOC105053573
subclass of: SO_0000673
so part of: LOC105053573
location: complement(join(5628807..5629042,5644802..5645602,5646137..5646569,5646713..5646973))
location: region:5628807-5646973:-1
so has part: feature:5646713-5646973:-1:exon
so has part: feature:5646137-5646569:-1:exon
so has part: feature:5644802-5645602:-1:exon
so has part: feature:5628807-5629042:-1:exon

XP_029123263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5646713-5646973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5646137-5646569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5644802-5645602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5628807-5629042:-1:exon

LOC114914636
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC114914636
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5654358..5654945
location: region:5654358-5654945:1
so has part: feature:5654358-5654945:1:exon

114914636
type: Gene
SIO_000068: ncbigene

position:5654358:1
position: 5654358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5654945:1
position: 5654945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5654358-5654945:1:exon

LOC114914636
type: Exon
subclass of: SO_0000147
RO_0002162: 51953
gene: LOC114914636
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC114914636
subclass of: SO_0000673
so part of: LOC114914636
location: 5654358..5654945
location: region:5654358-5654945:1
so has part: feature:5654358-5654945:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5654358-5654945:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 51953
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 5686895..5686994
location: region:5686895-5686994:1
so has part: feature:5686895-5686994:1:region

position:5686895:1
position: 5686895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5686994:1
position: 5686994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5686895-5686994:1:region

LOC105053577
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5713600..5715274)
location: region:5713600-5715274:-1
so has part: feature:5713600-5715274:-1:exon
subclass of: SO_0000010

105053577
type: Gene
SIO_000068: ncbigene

position:5713600:-1
position: 5713600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5715274:-1
position: 5715274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5713600-5715274:-1:exon

LOC105053577
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053577
product: LOB domain-containing protein 16-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_010934791.3
SIO_010081: LOC105053577
subclass of: SO_0000673
so part of: LOC105053577
location: complement(join(5713600..5714036,5714701..5715274))
location: region:5713600-5715274:-1
so has part: feature:5714701-5715274:-1:exon
so has part: feature:5713600-5714036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5714701-5715274:-1:exon

position:5714701:-1
position: 5714701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5713600-5714036:-1:exon

position:5714036:-1
position: 5714036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053577
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOB domain-containing protein 16-like
translation: MASGGGSPCGACKFLRRKCAADCVFAPYFCSEEGAARFAAIHKVFGASNVTKLLLHVPPADRCEAVVTIAYEAQARLRDPVYGCVGHIFALQQQVANLQLQLLQAKAQLSQSVISSQTLENQYQGNAANPLTRPYPYTKSMSPQSSLDCIDPSSDSLLPMHEMFFRDDLFTHRGPTHNEFGELQALASKMMKN
SIO_010081: LOC105053577
subclass of: SO_0000673
so part of: LOC105053577
location: complement(join(5713737..5714036,5714701..5714982))
location: region:5713737-5714982:-1
so has part: feature:5714701-5714982:-1:exon
so has part: feature:5713737-5714036:-1:exon

XP_010933093.1
type: Protein
SIO_000068: ncbiprotein

position:5713737:-1
position: 5713737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5714982:-1
position: 5714982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5714701-5714982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5713737-5714036:-1:exon

LOC105053578
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5718204..5739672)
location: region:5718204-5739672:-1
so has part: feature:5718204-5739672:-1:exon
subclass of: SO_0000010

105053578
type: Gene
SIO_000068: ncbigene

position:5718204:-1
position: 5718204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5739672:-1
position: 5739672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5718204-5739672:-1:exon

LOC105053578
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053578
product: poly [ADP-ribose] polymerase 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_010934792.3
SIO_010081: LOC105053578
subclass of: SO_0000673
so part of: LOC105053578
location: complement(join(5718204..5718509,5718689..5718871,5719242..5719379,5719683..5719765,5720062..5720170,5720275..5720464,5726837..5727000,5727152..5727228,5727306..5727418,5727516..5727753,5729867..5730124,5730233..5730296,5730426..5730486,5732168..5732323,5732402..5732597,5733239..5733554,5733670..5733856,5735345..5735525,5735696..5735745,5739429..5739672))
location: region:5718204-5739672:-1
so has part: feature:5739429-5739672:-1:exon
so has part: feature:5735696-5735745:-1:exon
so has part: feature:5735345-5735525:-1:exon
so has part: feature:5733670-5733856:-1:exon
so has part: feature:5733239-5733554:-1:exon
so has part: feature:5732402-5732597:-1:exon
so has part: feature:5732168-5732323:-1:exon
so has part: feature:5730426-5730486:-1:exon
so has part: feature:5730233-5730296:-1:exon
so has part: feature:5729867-5730124:-1:exon
so has part: feature:5727516-5727753:-1:exon
so has part: feature:5727306-5727418:-1:exon
so has part: feature:5727152-5727228:-1:exon
so has part: feature:5726837-5727000:-1:exon
so has part: feature:5720275-5720464:-1:exon
so has part: feature:5720062-5720170:-1:exon
so has part: feature:5719683-5719765:-1:exon
so has part: feature:5719242-5719379:-1:exon
so has part: feature:5718689-5718871:-1:exon
so has part: feature:5718204-5718509:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5739429-5739672:-1:exon

position:5739429:-1
position: 5739429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5735696-5735745:-1:exon

position:5735696:-1
position: 5735696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5735745:-1
position: 5735745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5735345-5735525:-1:exon

position:5735345:-1
position: 5735345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5735525:-1
position: 5735525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5733670-5733856:-1:exon

position:5733670:-1
position: 5733670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5733856:-1
position: 5733856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5733239-5733554:-1:exon

position:5733239:-1
position: 5733239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5733554:-1
position: 5733554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5732402-5732597:-1:exon

position:5732402:-1
position: 5732402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5732597:-1
position: 5732597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5732168-5732323:-1:exon

position:5732168:-1
position: 5732168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5732323:-1
position: 5732323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5730426-5730486:-1:exon

position:5730426:-1
position: 5730426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5730486:-1
position: 5730486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5730233-5730296:-1:exon

position:5730233:-1
position: 5730233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5730296:-1
position: 5730296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5729867-5730124:-1:exon

position:5729867:-1
position: 5729867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5730124:-1
position: 5730124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5727516-5727753:-1:exon

position:5727516:-1
position: 5727516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5727753:-1
position: 5727753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5727306-5727418:-1:exon

position:5727306:-1
position: 5727306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5727418:-1
position: 5727418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5727152-5727228:-1:exon

position:5727152:-1
position: 5727152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5727228:-1
position: 5727228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5726837-5727000:-1:exon

position:5726837:-1
position: 5726837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5727000:-1
position: 5727000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5720275-5720464:-1:exon

position:5720275:-1
position: 5720275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5720464:-1
position: 5720464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5720062-5720170:-1:exon

position:5720062:-1
position: 5720062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5720170:-1
position: 5720170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5719683-5719765:-1:exon

position:5719683:-1
position: 5719683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5719765:-1
position: 5719765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5719242-5719379:-1:exon

position:5719242:-1
position: 5719242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5719379:-1
position: 5719379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5718689-5718871:-1:exon

position:5718689:-1
position: 5718689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5718871:-1
position: 5718871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5718204-5718509:-1:exon

position:5718509:-1
position: 5718509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053578
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053578
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: poly [ADP-ribose] polymerase 1-like
translation: MANPPKPWKAEYAKSGRSSCKSCKNSIDKDQLRLGKMVAATQFDGFMPMWNHAGCIFKKGNQIKSVDDVEGVDLLRWEDQQKIRKYVEGGSVSTTAVSNDGCAMEVSQTSRAACRHCNQKIMKGMVRVSTKAAGQGSRGLAWHHVDCFIDMSPSTILEKISGWDSLSPEDKATVTALAKKGKSNNNSAVAQEKHATKDTKRKKVGSEDRNSKVPKSDENDSAGGALSKGTAAESGNANSSSTELEKNLEKQSKALWDIKDELKKHVTTVELREMLEANGQDSAGSEYDLRDRCADGMLFGALGKCPICSGSLHYSGGQYRCHGYVSAWSKCSYSTTDPVRLKEKWKIPDETSNQYLLKWFKSQKAKKPNRALPPSSNKSSSSTLVQSQPSNGDKLENLKVAIVGESRKAIEDWKHKFEEAGGKIHAKIKKDTNCLVLIGEMDDDDSEIKKARRMKTPIMREDYLHECIRKQKKIPFDLYKVEAAFETSRSDMVTVKVKGRSAVHEASGLQDTGHILEDGNSIYNTTLNMSDLSTGINSYYILQIIQEDKGSDCYVFRKWGRVGSDKIGGTKLEEMSKSDAIQEFKRLFLEKTGNPWEAWEQKKNFQKQPGRFFPLDIDYGVKQVSKKVESANTKSLLAPQLIELMKMLFDVETYRAAMLEFEINMSEMPLGKLSKTNIQKGFEALTEIQNLLNNNAAHDPVIKESLIVDASNRFFTLIPSIHPHVIRDEDDFKAKVKMLEALQDIEIASRLVGFDGENDESLDEKYKKLRCDITPLPHDSEDFKLVEKXLLNTHAPTHKDWSLELEEVFALEREGEYDKYAPYRDKLRNKMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGLYFADLVSKSAQYCYVDKKNPVGLMLLSEVALGEIYELKKATYMEKPPKGKHSTKGLGKTVPLETEFVKWRDQVVLPCGKPVPSSIRASELLYNEYIVYNTAQVKLQFLLKVRFHHKR
SIO_010081: LOC105053578
subclass of: SO_0000673
so part of: LOC105053578
location: complement(join(5718462..5718509,5718689..5718871,5719242..5719379,5719683..5719765,5720062..5720170,5720275..5720464,5726837..5727000,5727152..5727228,5727306..5727418,5727516..5727753,5729867..5730124,5730233..5730296,5730426..5730486,5732168..5732323,5732402..5732597,5733239..5733554,5733670..5733856,5735345..5735525,5735696..5735745,5739429..5739572))
location: region:5718462-5739572:-1
so has part: feature:5739429-5739572:-1:exon
so has part: feature:5735696-5735745:-1:exon
so has part: feature:5735345-5735525:-1:exon
so has part: feature:5733670-5733856:-1:exon
so has part: feature:5733239-5733554:-1:exon
so has part: feature:5732402-5732597:-1:exon
so has part: feature:5732168-5732323:-1:exon
so has part: feature:5730426-5730486:-1:exon
so has part: feature:5730233-5730296:-1:exon
so has part: feature:5729867-5730124:-1:exon
so has part: feature:5727516-5727753:-1:exon
so has part: feature:5727306-5727418:-1:exon
so has part: feature:5727152-5727228:-1:exon
so has part: feature:5726837-5727000:-1:exon
so has part: feature:5720275-5720464:-1:exon
so has part: feature:5720062-5720170:-1:exon
so has part: feature:5719683-5719765:-1:exon
so has part: feature:5719242-5719379:-1:exon
so has part: feature:5718689-5718871:-1:exon
so has part: feature:5718462-5718509:-1:exon

XP_010933094.1
type: Protein
SIO_000068: ncbiprotein

position:5718462:-1
position: 5718462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5739572:-1
position: 5739572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5739429-5739572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5735696-5735745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5735345-5735525:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5733670-5733856:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5733239-5733554:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5732402-5732597:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5732168-5732323:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5730426-5730486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5730233-5730296:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5729867-5730124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5727516-5727753:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5727306-5727418:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5727152-5727228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5726837-5727000:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5720275-5720464:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5720062-5720170:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5719683-5719765:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5719242-5719379:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5718689-5718871:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5718462-5718509:-1:exon

LOC109506402
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC109506402
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5779173..5779828)
location: region:5779173-5779828:-1
so has part: feature:5779173-5779828:-1:exon
subclass of: SO_0000010

109506402
type: Gene
SIO_000068: ncbigene

position:5779173:-1
position: 5779173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5779828:-1
position: 5779828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5779173-5779828:-1:exon

LOC109506402
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC109506402
product: uncharacterized LOC109506402
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_029267431.1
SIO_010081: LOC109506402
subclass of: SO_0000673
so part of: LOC109506402
location: complement(join(5779173..5779359,5779506..5779510,5779687..5779772,5779825..5779828))
location: region:5779173-5779828:-1
so has part: feature:5779825-5779828:-1:exon
so has part: feature:5779687-5779772:-1:exon
so has part: feature:5779506-5779510:-1:exon
so has part: feature:5779173-5779359:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5779825-5779828:-1:exon

position:5779825:-1
position: 5779825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5779687-5779772:-1:exon

position:5779687:-1
position: 5779687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5779772:-1
position: 5779772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5779506-5779510:-1:exon

position:5779506:-1
position: 5779506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5779510:-1
position: 5779510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5779173-5779359:-1:exon

position:5779359:-1
position: 5779359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109506402
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC109506402
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109506402
translation: MVCNALIISTLLSFLETNDPLRAWNNETLRLLDWIIKATSIQLIKEEKYQQDSGQSLESFSKITPSSLPKNTGGGTCPSCPMLNRAAIIIMRQ
SIO_010081: LOC109506402
subclass of: SO_0000673
so part of: LOC109506402
location: complement(join(5779173..5779359,5779506..5779510,5779687..5779772,5779825..5779828))
location: region:5779173-5779828:-1
so has part: feature:5779825-5779828:-1:exon
so has part: feature:5779687-5779772:-1:exon
so has part: feature:5779506-5779510:-1:exon
so has part: feature:5779173-5779359:-1:exon

XP_029123264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5779825-5779828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5779687-5779772:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5779506-5779510:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5779173-5779359:-1:exon

LOC105053579
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5790933..5793359
location: region:5790933-5793359:1
so has part: feature:5790933-5793359:1:exon
subclass of: SO_0000010

105053579
type: Gene
SIO_000068: ncbigene

position:5790933:1
position: 5790933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5793359:1
position: 5793359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5790933-5793359:1:exon

LOC105053579
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053579
product: uncharacterized LOC105053579
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010934793.3
SIO_010081: LOC105053579
subclass of: SO_0000673
so part of: LOC105053579
location: 5790933..5793359
location: region:5790933-5793359:1
so has part: feature:5790933-5793359:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5790933-5793359:1:exon

LOC105053579
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053579
translation: MVAEPWIHKMRTAFSLENSSATARKKKEVSQPPQDGGAAVSSTVGILSFEVANAMSRAVNLYRSLSDSEIARLRSQTFASHAVRYLVSANEPYLLSLALAEKLEDLNRVAAIASRLGRRCSHPALLGFEHVYSDLLASRIDPAALGFLSKDMDGTVRKMERFVSSTAALYTELEVLTELEQSAKKFPPTPVHEETRRAFEQKIRWQRRDVRHLRDASLWNQTYDKVVLLLAQAVCTIYSRIRHVFGESVLGLDCLVSDQSRQLSGQIIPSGHCAAHSGLLQSDASEGKSQKIPQMGAEADSGVNFHRDGLRQWASPGRLFMECLNLGTSLSWKISDDHFENRSCHSRFGTGAIIPFSDEQGPNRSVKIRRSRYGLKSRLTKLAPPSTVGGSALALHYANIVIIIEKLLRYPLLVGEEVRDDLYQMLPSSLRLALRRSLKSFVKNLAIYDAPLAHDWKEAIEKTLSWLAPMAHNMIQWQTERNFEQQQIVLRENVLLLQTLYFADREKTEAAICELLVGLNYICRYEQQKNALLDCTSSVDFDDRVEWHMQY
SIO_010081: LOC105053579
subclass of: SO_0000673
so part of: LOC105053579
location: 5791479..5793134
location: region:5791479-5793134:1
so has part: feature:5791479-5793134:1:exon

XP_010933095.1
type: Protein
SIO_000068: ncbiprotein

position:5791479:1
position: 5791479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5793134:1
position: 5793134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5791479-5793134:1:exon

LOC105053580
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5812382..5841042
location: region:5812382-5841042:1
so has part: feature:5812382-5841042:1:exon
subclass of: SO_0000010

105053580
type: Gene
SIO_000068: ncbigene

position:5812382:1
position: 5812382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5841042:1
position: 5841042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5812382-5841042:1:exon

LOC105053580
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053580
product: bet1-like SNARE 1-1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_010934795.2
SIO_010081: LOC105053580
subclass of: SO_0000673
so part of: LOC105053580
location: join(5812382..5812610,5813443..5813576,5815161..5815302,5839687..5839743,5840449..5840508,5840586..5841042)
location: region:5812382-5841042:1
so has part: feature:5812382-5812610:1:exon
so has part: feature:5813443-5813576:1:exon
so has part: feature:5815161-5815302:1:exon
so has part: feature:5839687-5839743:1:exon
so has part: feature:5840449-5840508:1:exon
so has part: feature:5840586-5841042:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5812382-5812610:1:exon

position:5812610:1
position: 5812610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5813443-5813576:1:exon

position:5813443:1
position: 5813443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5813576:1
position: 5813576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5815161-5815302:1:exon

position:5815161:1
position: 5815161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5815302:1
position: 5815302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5839687-5839743:1:exon

position:5839687:1
position: 5839687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5839743:1
position: 5839743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5840449-5840508:1:exon

position:5840449:1
position: 5840449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5840508:1
position: 5840508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5840586-5841042:1:exon

position:5840586:1
position: 5840586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105053580
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053580
product: bet1-like SNARE 1-1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_010934796.3
SIO_010081: LOC105053580
subclass of: SO_0000673
so part of: LOC105053580
location: join(5812409..5812694,5813443..5813576,5815161..5815302,5839687..5839743,5840449..5840508,5840586..5841042)
location: region:5812409-5841042:1
so has part: feature:5812409-5812694:1:exon
so has part: feature:5813443-5813576:1:exon
so has part: feature:5815161-5815302:1:exon
so has part: feature:5839687-5839743:1:exon
so has part: feature:5840449-5840508:1:exon
so has part: feature:5840586-5841042:1:exon

position:5812409:1
position: 5812409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5812409-5812694:1:exon

position:5812694:1
position: 5812694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5813443-5813576:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5815161-5815302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5839687-5839743:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5840449-5840508:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5840586-5841042:1:exon

LOC105053580
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053580
product: bet1-like SNARE 1-1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_019853524.2
SIO_010081: LOC105053580
subclass of: SO_0000673
so part of: LOC105053580
location: join(5812409..5812610,5813396..5813576,5815161..5815302,5839687..5839743,5840449..5840508,5840586..5841042)
location: region:5812409-5841042:1
so has part: feature:5812409-5812610:1:exon
so has part: feature:5813396-5813576:1:exon
so has part: feature:5815161-5815302:1:exon
so has part: feature:5839687-5839743:1:exon
so has part: feature:5840449-5840508:1:exon
so has part: feature:5840586-5841042:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5812409-5812610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5813396-5813576:1:exon

position:5813396:1
position: 5813396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5815161-5815302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5839687-5839743:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5840449-5840508:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5840586-5841042:1:exon

LOC105053580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bet1-like SNARE 1-1
translation: MNSRRDYRSNRAALFNGLEEGGIRAYSSHEIDEHDNDRAIDGLQDRVNILKRLTGDIHEEAEMHNRVLDRMGHDMDASRGVLSGTVDRFKMVFEKKSSRRMATLVASFLALFLLIYYLTK
SIO_010081: LOC105053580
subclass of: SO_0000673
so part of: LOC105053580
location: join(5813563..5813576,5815161..5815302,5839687..5839743,5840449..5840508,5840586..5840675)
location: region:5813563-5840675:1
so has part: feature:5813563-5813576:1:exon
so has part: feature:5815161-5815302:1:exon
so has part: feature:5839687-5839743:1:exon
so has part: feature:5840449-5840508:1:exon
so has part: feature:5840586-5840675:1:exon

XP_019709083.1
type: Protein
SIO_000068: ncbiprotein

position:5813563:1
position: 5813563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5840675:1
position: 5840675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5813563-5813576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5815161-5815302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5839687-5839743:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840449-5840508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5840586-5840675:1:exon

LOC105053580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bet1-like SNARE 1-1
translation: MNSRRDYRSNRAALFNGLEEGGIRAYSSHEIDEHDNDRAIDGLQDRVNILKRLTGDIHEEAEMHNRVLDRMGHDMDASRGVLSGTVDRFKMVFEKKSSRRMATLVASFLALFLLIYYLTK
SIO_010081: LOC105053580
subclass of: SO_0000673
so part of: LOC105053580
location: join(5813563..5813576,5815161..5815302,5839687..5839743,5840449..5840508,5840586..5840675)
location: region:5813563-5840675:1
so has part: feature:5813563-5813576:1:exon
so has part: feature:5815161-5815302:1:exon
so has part: feature:5839687-5839743:1:exon
so has part: feature:5840449-5840508:1:exon
so has part: feature:5840586-5840675:1:exon

XP_010933097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5813563-5813576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5815161-5815302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5839687-5839743:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840449-5840508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5840586-5840675:1:exon

LOC105053580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bet1-like SNARE 1-1
translation: MNSRRDYRSNRAALFNGLEEGGIRAYSSHEIDEHDNDRAIDGLQDRVNILKRLTGDIHEEAEMHNRVLDRMGHDMDASRGVLSGTVDRFKMVFEKKSSRRMATLVASFLALFLLIYYLTK
SIO_010081: LOC105053580
subclass of: SO_0000673
so part of: LOC105053580
location: join(5813563..5813576,5815161..5815302,5839687..5839743,5840449..5840508,5840586..5840675)
location: region:5813563-5840675:1
so has part: feature:5813563-5813576:1:exon
so has part: feature:5815161-5815302:1:exon
so has part: feature:5839687-5839743:1:exon
so has part: feature:5840449-5840508:1:exon
so has part: feature:5840586-5840675:1:exon

XP_010933098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5813563-5813576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5815161-5815302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5839687-5839743:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840449-5840508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5840586-5840675:1:exon

TRNAG-GCC
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: TRNAG-GCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(5922996..5923066)
location: region:5922996-5923066:-1
so has part: feature:5922996-5923066:-1:exon
subclass of: SO_0000663

109506426
type: Gene
SIO_000068: ncbigene

position:5922996:-1
position: 5922996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5923066:-1
position: 5923066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5922996-5923066:-1:exon

TRNAG-GCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 51953
gene: TRNAG-GCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(5923032..5923034),aa:Gly, seq:gcc)
SIO_010081: TRNAG-GCC
subclass of: SO_0000673
so part of: TRNAG-GCC
location: complement(5922996..5923066)
location: region:5922996-5923066:-1
so has part: feature:5922996-5923066:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5922996-5923066:-1:exon

LOC105053581
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5935040..5956775)
location: region:5935040-5956775:-1
so has part: feature:5935040-5956775:-1:exon
subclass of: SO_0000011

105053581
type: Gene
SIO_000068: ncbigene

position:5935040:-1
position: 5935040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5956775:-1
position: 5956775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5935040-5956775:-1:exon

LOC105053581
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51953
nc RNA class: lncRNA
gene: LOC105053581
product: uncharacterized LOC105053581, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XR_003802096.1
SIO_010081: LOC105053581
subclass of: SO_0000673
so part of: LOC105053581
location: complement(join(5935040..5935537,5956460..5956775))
location: region:5935040-5956775:-1
so has part: feature:5956460-5956775:-1:exon
so has part: feature:5935040-5935537:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5956460-5956775:-1:exon

position:5956460:-1
position: 5956460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5935040-5935537:-1:exon

position:5935537:-1
position: 5935537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053581
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51953
nc RNA class: lncRNA
gene: LOC105053581
product: uncharacterized LOC105053581, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_833480.3
SIO_010081: LOC105053581
subclass of: SO_0000673
so part of: LOC105053581
location: complement(join(5935040..5935537,5938068..5938142,5956460..5956775))
location: region:5935040-5956775:-1
so has part: feature:5956460-5956775:-1:exon
so has part: feature:5938068-5938142:-1:exon
so has part: feature:5935040-5935537:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5956460-5956775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5938068-5938142:-1:exon

position:5938068:-1
position: 5938068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5938142:-1
position: 5938142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5935040-5935537:-1:exon

LOC105053581
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51953
nc RNA class: lncRNA
gene: LOC105053581
product: uncharacterized LOC105053581, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_833479.3
SIO_010081: LOC105053581
subclass of: SO_0000673
so part of: LOC105053581
location: complement(join(5935040..5935537,5938068..5938142,5938376..5938506,5956460..5956775))
location: region:5935040-5956775:-1
so has part: feature:5956460-5956775:-1:exon
so has part: feature:5938376-5938506:-1:exon
so has part: feature:5938068-5938142:-1:exon
so has part: feature:5935040-5935537:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5956460-5956775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5938376-5938506:-1:exon

position:5938376:-1
position: 5938376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5938506:-1
position: 5938506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5938068-5938142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5935040-5935537:-1:exon

LOC105053581
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51953
nc RNA class: lncRNA
gene: LOC105053581
product: uncharacterized LOC105053581, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_833481.3
SIO_010081: LOC105053581
subclass of: SO_0000673
so part of: LOC105053581
location: complement(join(5935040..5935537,5938068..5938142,5938376..5938511,5956460..5956775))
location: region:5935040-5956775:-1
so has part: feature:5956460-5956775:-1:exon
so has part: feature:5938376-5938511:-1:exon
so has part: feature:5938068-5938142:-1:exon
so has part: feature:5935040-5935537:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5956460-5956775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5938376-5938511:-1:exon

position:5938511:-1
position: 5938511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5938068-5938142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5935040-5935537:-1:exon

LOC114914650
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC114914650
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5963382..5963480
location: region:5963382-5963480:1
so has part: feature:5963382-5963480:1:exon
subclass of: SO_0000578

114914650
type: Gene
SIO_000068: ncbigene

position:5963382:1
position: 5963382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5963480:1
position: 5963480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5963382-5963480:1:exon

LOC114914650
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51953
nc RNA class: snoRNA
gene: LOC114914650
product: small nucleolar RNA Z103
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00149
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003802189.1
SIO_010081: LOC114914650
subclass of: SO_0000673
so part of: LOC114914650
location: 5963382..5963480
location: region:5963382-5963480:1
so has part: feature:5963382-5963480:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5963382-5963480:1:exon

LOC105053582
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053582
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5970876..5976991)
location: region:5970876-5976991:-1
so has part: feature:5970876-5976991:-1:exon
subclass of: SO_0000010

105053582
type: Gene
SIO_000068: ncbigene

position:5970876:-1
position: 5970876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5976991:-1
position: 5976991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5970876-5976991:-1:exon

LOC105053582
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053582
product: ethylene receptor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_010934799.3
SIO_010081: LOC105053582
subclass of: SO_0000673
so part of: LOC105053582
location: complement(join(5970876..5971655,5974095..5975924,5976659..5976991))
location: region:5970876-5976991:-1
so has part: feature:5976659-5976991:-1:exon
so has part: feature:5974095-5975924:-1:exon
so has part: feature:5970876-5971655:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5976659-5976991:-1:exon

position:5976659:-1
position: 5976659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5974095-5975924:-1:exon

position:5974095:-1
position: 5974095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5975924:-1
position: 5975924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5970876-5971655:-1:exon

position:5971655:-1
position: 5971655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053582
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053582
product: ethylene receptor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_010934797.3
SIO_010081: LOC105053582
subclass of: SO_0000673
so part of: LOC105053582
location: complement(join(5970876..5971655,5974095..5975924,5976559..5976991))
location: region:5970876-5976991:-1
so has part: feature:5976559-5976991:-1:exon
so has part: feature:5974095-5975924:-1:exon
so has part: feature:5970876-5971655:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5976559-5976991:-1:exon

position:5976559:-1
position: 5976559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5974095-5975924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5970876-5971655:-1:exon

LOC105053582
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053582
product: ethylene receptor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_010934798.3
SIO_010081: LOC105053582
subclass of: SO_0000673
so part of: LOC105053582
location: complement(join(5970876..5971655,5974095..5975924,5976353..5976549))
location: region:5970876-5976549:-1
so has part: feature:5976353-5976549:-1:exon
so has part: feature:5974095-5975924:-1:exon
so has part: feature:5970876-5971655:-1:exon

position:5976549:-1
position: 5976549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5976353-5976549:-1:exon

position:5976353:-1
position: 5976353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5974095-5975924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5970876-5971655:-1:exon

LOC105053582
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053582
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ethylene receptor 2
translation: MLRALWHGLLISSLFFCASAIQIGFPRCNCDGDSLWSTESILQCQKVSDFLIAAAYFSIPLELIYFATCSNLFPFKWIVFLFGAFIVLCGLTHMLNVFTYEPHSFLLMLSLTISKFFTALVSFATAITLLTLIPQLLRVKVRENFLRIKARELDREVGEMKRQEEASWHVRMLTQEIRRSLDKHTILYTTLVELSNTLGLQNCAVWMPNENRREMNLTHELRQRSSSDLYSHSIAIDDPDVMEITETKGVKILRPESMLASASSGGTHEPGAVAAIRMPMLKVSNFKGGTPQIVETSYAILVLVLPRDDSRVWSYHELEIIEVVADQVAVALSHAAVLEESQLMREKLVEQNRALLHAKQDAMMASEARNSFQRTMSQGMRRPIHSILGLLSIMQQEKLSQEQRLVVNTIAKTSSVVSTLISDVMDTSTINSEHFSLVMRPFQLHSMIKEAVNVVRCLCDCRGFGFEFQVDNAVPDRVVGDEKRIFHVILHIIATLFNGHDEGFVTFGVLNYDEVKDGQDREWVPWKSSFSNGYTCVKFEIGIKRLQNDEPGASTVQLAPKPYSEGFEMGLNFSMCKKLVQMMQGNIWAVPNSQGIAQSITLVIQFQPQPLTPVSDVGESSGLYRASSIPNFKGLRVLLADNDDDNRAVTRKLLEKLGCSVSSVTSGIQCLSSFGTTSMHFQLVMVDLHMPKMDGFEVAMRIRKFRSRCWPSIVALTASAEDDVWDRCLQCGINGLIRKPVTLQTLAEELHRVLQNT
SIO_010081: LOC105053582
subclass of: SO_0000673
so part of: LOC105053582
location: complement(join(5971125..5971655,5974095..5975837))
location: region:5971125-5975837:-1
so has part: feature:5974095-5975837:-1:exon
so has part: feature:5971125-5971655:-1:exon

XP_010933099.1
type: Protein
SIO_000068: ncbiprotein

position:5971125:-1
position: 5971125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5975837:-1
position: 5975837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5974095-5975837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5971125-5971655:-1:exon

LOC105053582
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053582
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ethylene receptor 2
translation: MLRALWHGLLISSLFFCASAIQIGFPRCNCDGDSLWSTESILQCQKVSDFLIAAAYFSIPLELIYFATCSNLFPFKWIVFLFGAFIVLCGLTHMLNVFTYEPHSFLLMLSLTISKFFTALVSFATAITLLTLIPQLLRVKVRENFLRIKARELDREVGEMKRQEEASWHVRMLTQEIRRSLDKHTILYTTLVELSNTLGLQNCAVWMPNENRREMNLTHELRQRSSSDLYSHSIAIDDPDVMEITETKGVKILRPESMLASASSGGTHEPGAVAAIRMPMLKVSNFKGGTPQIVETSYAILVLVLPRDDSRVWSYHELEIIEVVADQVAVALSHAAVLEESQLMREKLVEQNRALLHAKQDAMMASEARNSFQRTMSQGMRRPIHSILGLLSIMQQEKLSQEQRLVVNTIAKTSSVVSTLISDVMDTSTINSEHFSLVMRPFQLHSMIKEAVNVVRCLCDCRGFGFEFQVDNAVPDRVVGDEKRIFHVILHIIATLFNGHDEGFVTFGVLNYDEVKDGQDREWVPWKSSFSNGYTCVKFEIGIKRLQNDEPGASTVQLAPKPYSEGFEMGLNFSMCKKLVQMMQGNIWAVPNSQGIAQSITLVIQFQPQPLTPVSDVGESSGLYRASSIPNFKGLRVLLADNDDDNRAVTRKLLEKLGCSVSSVTSGIQCLSSFGTTSMHFQLVMVDLHMPKMDGFEVAMRIRKFRSRCWPSIVALTASAEDDVWDRCLQCGINGLIRKPVTLQTLAEELHRVLQNT
SIO_010081: LOC105053582
subclass of: SO_0000673
so part of: LOC105053582
location: complement(join(5971125..5971655,5974095..5975837))
location: region:5971125-5975837:-1
so has part: feature:5974095-5975837:-1:exon
so has part: feature:5971125-5971655:-1:exon

XP_010933100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5974095-5975837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5971125-5971655:-1:exon

LOC105053582
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053582
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ethylene receptor 2
translation: MLRALWHGLLISSLFFCASAIQIGFPRCNCDGDSLWSTESILQCQKVSDFLIAAAYFSIPLELIYFATCSNLFPFKWIVFLFGAFIVLCGLTHMLNVFTYEPHSFLLMLSLTISKFFTALVSFATAITLLTLIPQLLRVKVRENFLRIKARELDREVGEMKRQEEASWHVRMLTQEIRRSLDKHTILYTTLVELSNTLGLQNCAVWMPNENRREMNLTHELRQRSSSDLYSHSIAIDDPDVMEITETKGVKILRPESMLASASSGGTHEPGAVAAIRMPMLKVSNFKGGTPQIVETSYAILVLVLPRDDSRVWSYHELEIIEVVADQVAVALSHAAVLEESQLMREKLVEQNRALLHAKQDAMMASEARNSFQRTMSQGMRRPIHSILGLLSIMQQEKLSQEQRLVVNTIAKTSSVVSTLISDVMDTSTINSEHFSLVMRPFQLHSMIKEAVNVVRCLCDCRGFGFEFQVDNAVPDRVVGDEKRIFHVILHIIATLFNGHDEGFVTFGVLNYDEVKDGQDREWVPWKSSFSNGYTCVKFEIGIKRLQNDEPGASTVQLAPKPYSEGFEMGLNFSMCKKLVQMMQGNIWAVPNSQGIAQSITLVIQFQPQPLTPVSDVGESSGLYRASSIPNFKGLRVLLADNDDDNRAVTRKLLEKLGCSVSSVTSGIQCLSSFGTTSMHFQLVMVDLHMPKMDGFEVAMRIRKFRSRCWPSIVALTASAEDDVWDRCLQCGINGLIRKPVTLQTLAEELHRVLQNT
SIO_010081: LOC105053582
subclass of: SO_0000673
so part of: LOC105053582
location: complement(join(5971125..5971655,5974095..5975837))
location: region:5971125-5975837:-1
so has part: feature:5974095-5975837:-1:exon
so has part: feature:5971125-5971655:-1:exon

XP_010933101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5974095-5975837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5971125-5971655:-1:exon

LOC105053598
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053598
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6047723..6048271
location: region:6047723-6048271:1
so has part: feature:6047723-6048271:1:exon
subclass of: SO_0000010

105053598
type: Gene
SIO_000068: ncbigene

position:6047723:1
position: 6047723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6048271:1
position: 6048271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6047723-6048271:1:exon

LOC105053598
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053598
product: zinc finger protein 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_010934831.1
SIO_010081: LOC105053598
subclass of: SO_0000673
so part of: LOC105053598
location: 6047723..6048271
location: region:6047723-6048271:1
so has part: feature:6047723-6048271:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6047723-6048271:1:exon

LOC105053598
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053598
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 5-like
translation: MEGGHNKGTKVSSSKASSPEPTTDDARTMRPYYECMFCKRGFTTAQALGGHMNIHRKDRARMQHDQMVYSVSGKAEENLEGYGYNIPNSYHHRAYSQVSESLMKNNSFCFPASFSGGGDSRVARDDGMGSRRQRELSLFGQELQLGLGMQFNGSSGVYEKEKRNYVDEEKELDLELRLGHQP
SIO_010081: LOC105053598
subclass of: SO_0000673
so part of: LOC105053598
location: 6047723..6048271
location: region:6047723-6048271:1
so has part: feature:6047723-6048271:1:exon

XP_010933133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6047723-6048271:1:exon

LOC105053599
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053599
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6141417..6142064)
location: region:6141417-6142064:-1
so has part: feature:6141417-6142064:-1:exon
subclass of: SO_0000010

105053599
type: Gene
SIO_000068: ncbigene

position:6141417:-1
position: 6141417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6142064:-1
position: 6142064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6141417-6142064:-1:exon

LOC105053599
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053599
product: transcriptional regulator SUPERMAN-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010934832.1
SIO_010081: LOC105053599
subclass of: SO_0000673
so part of: LOC105053599
location: complement(6141417..6142064)
location: region:6141417-6142064:-1
so has part: feature:6141417-6142064:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6141417-6142064:-1:exon

LOC105053599
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053599
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional regulator SUPERMAN-like
translation: MERCGRSSRDNNINSSNNNKVREPWGYSQVGKGNTPCSGLIGGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRQSPPWDPPLSNPNPNPNPNLPGTFIPNLNVSPSIASDPKLSPRTHRFPSLLSPLTHFSSSSSSIYSTELFCSRGGDLRGMETVEGVEELRDIVEEGTDDVLRKETELVRLDLEIGTCGDSEEDDLDLELRLGFT
SIO_010081: LOC105053599
subclass of: SO_0000673
so part of: LOC105053599
location: complement(6141417..6142064)
location: region:6141417-6142064:-1
so has part: feature:6141417-6142064:-1:exon

XP_010933134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6141417-6142064:-1:exon

LOC105053583
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6209923..6217386)
location: region:6209923-6217386:-1
so has part: feature:6209923-6217386:-1:exon
subclass of: SO_0000010

105053583
type: Gene
SIO_000068: ncbigene

position:6209923:-1
position: 6209923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6217386:-1
position: 6217386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6209923-6217386:-1:exon

LOC105053583
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053583
product: uncharacterized LOC105053583, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019853516.2
SIO_010081: LOC105053583
subclass of: SO_0000673
so part of: LOC105053583
location: complement(join(6209923..6210393,6213374..6213441,6213527..6213556,6213682..6213810,6215238..6215316,6215450..6215502,6216227..6216269,6216387..6216431,6216525..6216608,6217011..6217383))
location: region:6209923-6217383:-1
so has part: feature:6217011-6217383:-1:exon
so has part: feature:6216525-6216608:-1:exon
so has part: feature:6216387-6216431:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6215238-6215316:-1:exon
so has part: feature:6213682-6213810:-1:exon
so has part: feature:6213527-6213556:-1:exon
so has part: feature:6213374-6213441:-1:exon
so has part: feature:6209923-6210393:-1:exon

position:6217383:-1
position: 6217383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6217011-6217383:-1:exon

position:6217011:-1
position: 6217011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6216525-6216608:-1:exon

position:6216525:-1
position: 6216525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6216608:-1
position: 6216608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6216387-6216431:-1:exon

position:6216387:-1
position: 6216387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6216431:-1
position: 6216431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6216227-6216269:-1:exon

position:6216227:-1
position: 6216227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6216269:-1
position: 6216269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6215450-6215502:-1:exon

position:6215450:-1
position: 6215450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6215502:-1
position: 6215502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6215238-6215316:-1:exon

position:6215238:-1
position: 6215238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6215316:-1
position: 6215316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6213682-6213810:-1:exon

position:6213682:-1
position: 6213682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6213810:-1
position: 6213810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6213527-6213556:-1:exon

position:6213527:-1
position: 6213527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6213556:-1
position: 6213556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6213374-6213441:-1:exon

position:6213374:-1
position: 6213374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6213441:-1
position: 6213441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6209923-6210393:-1:exon

position:6210393:-1
position: 6210393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053583
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053583
product: uncharacterized LOC105053583, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019853515.2
SIO_010081: LOC105053583
subclass of: SO_0000673
so part of: LOC105053583
location: complement(join(6209923..6210407,6213374..6213441,6213527..6213556,6213682..6213810,6215238..6215316,6215450..6215502,6216227..6216269,6216387..6216431,6216525..6216608,6217011..6217383))
location: region:6209923-6217383:-1
so has part: feature:6217011-6217383:-1:exon
so has part: feature:6216525-6216608:-1:exon
so has part: feature:6216387-6216431:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6215238-6215316:-1:exon
so has part: feature:6213682-6213810:-1:exon
so has part: feature:6213527-6213556:-1:exon
so has part: feature:6213374-6213441:-1:exon
so has part: feature:6209923-6210407:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6217011-6217383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216525-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216387-6216431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6215238-6215316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6213682-6213810:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6213527-6213556:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6213374-6213441:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6209923-6210407:-1:exon

position:6210407:-1
position: 6210407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053583
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053583
product: uncharacterized LOC105053583, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019853514.2
SIO_010081: LOC105053583
subclass of: SO_0000673
so part of: LOC105053583
location: complement(join(6209923..6210439,6213374..6213441,6213527..6213556,6213682..6213810,6215238..6215316,6215450..6215502,6216227..6216269,6216387..6216431,6216525..6216608,6217011..6217383))
location: region:6209923-6217383:-1
so has part: feature:6217011-6217383:-1:exon
so has part: feature:6216525-6216608:-1:exon
so has part: feature:6216387-6216431:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6215238-6215316:-1:exon
so has part: feature:6213682-6213810:-1:exon
so has part: feature:6213527-6213556:-1:exon
so has part: feature:6213374-6213441:-1:exon
so has part: feature:6209923-6210439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6217011-6217383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216525-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216387-6216431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6215238-6215316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6213682-6213810:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6213527-6213556:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6213374-6213441:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6209923-6210439:-1:exon

position:6210439:-1
position: 6210439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053583
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053583
product: uncharacterized LOC105053583, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019853518.2
SIO_010081: LOC105053583
subclass of: SO_0000673
so part of: LOC105053583
location: complement(join(6209923..6210439,6213374..6213441,6213527..6213556,6213682..6213794,6215238..6215316,6215450..6215502,6216227..6216269,6216387..6216431,6216525..6216608,6217011..6217382))
location: region:6209923-6217382:-1
so has part: feature:6217011-6217382:-1:exon
so has part: feature:6216525-6216608:-1:exon
so has part: feature:6216387-6216431:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6215238-6215316:-1:exon
so has part: feature:6213682-6213794:-1:exon
so has part: feature:6213527-6213556:-1:exon
so has part: feature:6213374-6213441:-1:exon
so has part: feature:6209923-6210439:-1:exon

position:6217382:-1
position: 6217382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6217011-6217382:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216525-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216387-6216431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6215238-6215316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6213682-6213794:-1:exon

position:6213794:-1
position: 6213794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6213527-6213556:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6213374-6213441:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6209923-6210439:-1:exon

LOC105053583
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105053583
product: uncharacterized LOC105053583, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_003802102.1
SIO_010081: LOC105053583
so part of: LOC105053583
location: complement(join(6209923..6210439,6213374..6213441,6213527..6213556,6213682..6213810,6215238..6215316,6215450..6215502,6216227..6216269,6216525..6216608,6216815..6217372))
location: region:6209923-6217372:-1
so has part: feature:6216815-6217372:-1:exon
so has part: feature:6216525-6216608:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6215238-6215316:-1:exon
so has part: feature:6213682-6213810:-1:exon
so has part: feature:6213527-6213556:-1:exon
so has part: feature:6213374-6213441:-1:exon
so has part: feature:6209923-6210439:-1:exon

position:6217372:-1
position: 6217372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6216815-6217372:-1:exon

position:6216815:-1
position: 6216815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6216525-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215238-6215316:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6213682-6213810:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6213527-6213556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6213374-6213441:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6209923-6210439:-1:exon

LOC105053583
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105053583
product: uncharacterized LOC105053583, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003802101.1
SIO_010081: LOC105053583
so part of: LOC105053583
location: complement(join(6209923..6210439,6213374..6213441,6213527..6213556,6213682..6213794,6215238..6215331,6215450..6215502,6216227..6216269,6216525..6216608,6216815..6217370))
location: region:6209923-6217370:-1
so has part: feature:6216815-6217370:-1:exon
so has part: feature:6216525-6216608:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6215238-6215331:-1:exon
so has part: feature:6213682-6213794:-1:exon
so has part: feature:6213527-6213556:-1:exon
so has part: feature:6213374-6213441:-1:exon
so has part: feature:6209923-6210439:-1:exon

position:6217370:-1
position: 6217370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6216815-6217370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216525-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215238-6215331:-1:exon

position:6215331:-1
position: 6215331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6213682-6213794:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6213527-6213556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6213374-6213441:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6209923-6210439:-1:exon

LOC105053583
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105053583
product: uncharacterized LOC105053583, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003802099.1
SIO_010081: LOC105053583
so part of: LOC105053583
location: complement(join(6209923..6210439,6213374..6213441,6213527..6213556,6213682..6213810,6215238..6215331,6215450..6215502,6216227..6216269,6216387..6216608,6216815..6217365))
location: region:6209923-6217365:-1
so has part: feature:6216815-6217365:-1:exon
so has part: feature:6216387-6216608:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6215238-6215331:-1:exon
so has part: feature:6213682-6213810:-1:exon
so has part: feature:6213527-6213556:-1:exon
so has part: feature:6213374-6213441:-1:exon
so has part: feature:6209923-6210439:-1:exon

position:6217365:-1
position: 6217365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6216815-6217365:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216387-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215238-6215331:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6213682-6213810:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6213527-6213556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6213374-6213441:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6209923-6210439:-1:exon

LOC105053583
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105053583
product: uncharacterized LOC105053583, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003802100.1
SIO_010081: LOC105053583
so part of: LOC105053583
location: complement(join(6209923..6210439,6213374..6213441,6213527..6213556,6213682..6213794,6215238..6215331,6215450..6215502,6216227..6216269,6216387..6216608,6217011..6217363))
location: region:6209923-6217363:-1
so has part: feature:6217011-6217363:-1:exon
so has part: feature:6216387-6216608:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6215238-6215331:-1:exon
so has part: feature:6213682-6213794:-1:exon
so has part: feature:6213527-6213556:-1:exon
so has part: feature:6213374-6213441:-1:exon
so has part: feature:6209923-6210439:-1:exon

position:6217363:-1
position: 6217363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6217011-6217363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216387-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215238-6215331:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6213682-6213794:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6213527-6213556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6213374-6213441:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6209923-6210439:-1:exon

LOC105053583
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105053583
product: uncharacterized LOC105053583, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003802098.1
SIO_010081: LOC105053583
so part of: LOC105053583
location: complement(join(6209923..6210439,6213374..6213441,6213527..6213556,6213682..6213794,6215238..6215331,6215450..6215502,6216227..6216269,6216405..6216608,6216815..6217343))
location: region:6209923-6217343:-1
so has part: feature:6216815-6217343:-1:exon
so has part: feature:6216405-6216608:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6215238-6215331:-1:exon
so has part: feature:6213682-6213794:-1:exon
so has part: feature:6213527-6213556:-1:exon
so has part: feature:6213374-6213441:-1:exon
so has part: feature:6209923-6210439:-1:exon

position:6217343:-1
position: 6217343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6216815-6217343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216405-6216608:-1:exon

position:6216405:-1
position: 6216405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215238-6215331:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6213682-6213794:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6213527-6213556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6213374-6213441:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6209923-6210439:-1:exon

LOC105053583
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51953
gene: LOC105053583
product: uncharacterized LOC105053583, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003802097.1
SIO_010081: LOC105053583
so part of: LOC105053583
location: complement(join(6209923..6210439,6213374..6213441,6213527..6213556,6213682..6213794,6215238..6215331,6215450..6215502,6216227..6216269,6216387..6216608,6216815..6217343))
location: region:6209923-6217343:-1
so has part: feature:6216815-6217343:-1:exon
so has part: feature:6216387-6216608:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6215238-6215331:-1:exon
so has part: feature:6213682-6213794:-1:exon
so has part: feature:6213527-6213556:-1:exon
so has part: feature:6213374-6213441:-1:exon
so has part: feature:6209923-6210439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6216815-6217343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216387-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215238-6215331:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6213682-6213794:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6213527-6213556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6213374-6213441:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6209923-6210439:-1:exon

LOC105053583
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053583 isoform X3
translation: MAEMEEGAKKREEEPINCYRAGFLAFNSRATMSVFLQEIVGLHMKMVTETLINVAANGETRQKFVDSHSLKFLVPLMLFESKIKGGEPSIIQWATESNMVDLRRTIVETGNFDCFRLQCTSLKLYFKMSL
SIO_010081: LOC105053583
subclass of: SO_0000673
so part of: LOC105053583
location: complement(join(6213749..6213810,6215238..6215316,6215450..6215502,6216227..6216269,6216387..6216431,6216525..6216608,6217011..6217037))
location: region:6213749-6217037:-1
so has part: feature:6217011-6217037:-1:exon
so has part: feature:6216525-6216608:-1:exon
so has part: feature:6216387-6216431:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6215238-6215316:-1:exon
so has part: feature:6213749-6213810:-1:exon

XP_019709073.1
type: Protein
SIO_000068: ncbiprotein

position:6213749:-1
position: 6213749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6217037:-1
position: 6217037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6217011-6217037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216525-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216387-6216431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6215238-6215316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6213749-6213810:-1:exon

LOC105053583
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053583 isoform X3
translation: MAEMEEGAKKREEEPINCYRAGFLAFNSRATMSVFLQEIVGLHMKMVTETLINVAANGETRQKFVDSHSLKFLVPLMLFESKIKGGEPSIIQWATESNMVDLRRTIVETGNFDCFRLQCTSLKLYFKMSL
SIO_010081: LOC105053583
subclass of: SO_0000673
so part of: LOC105053583
location: complement(join(6213749..6213810,6215238..6215316,6215450..6215502,6216227..6216269,6216387..6216431,6216525..6216608,6217011..6217037))
location: region:6213749-6217037:-1
so has part: feature:6217011-6217037:-1:exon
so has part: feature:6216525-6216608:-1:exon
so has part: feature:6216387-6216431:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6215238-6215316:-1:exon
so has part: feature:6213749-6213810:-1:exon

XP_019709074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6217011-6217037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216525-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216387-6216431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6215238-6215316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6213749-6213810:-1:exon

LOC105053583
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053583 isoform X3
translation: MAEMEEGAKKREEEPINCYRAGFLAFNSRATMSVFLQEIVGLHMKMVTETLINVAANGETRQKFVDSHSLKFLVPLMLFESKIKGGEPSIIQWATESNMVDLRRTIVETGNFDCFRLQCTSLKLYFKMSL
SIO_010081: LOC105053583
subclass of: SO_0000673
so part of: LOC105053583
location: complement(join(6213749..6213810,6215238..6215316,6215450..6215502,6216227..6216269,6216387..6216431,6216525..6216608,6217011..6217037))
location: region:6213749-6217037:-1
so has part: feature:6217011-6217037:-1:exon
so has part: feature:6216525-6216608:-1:exon
so has part: feature:6216387-6216431:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6215238-6215316:-1:exon
so has part: feature:6213749-6213810:-1:exon

XP_019709075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6217011-6217037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216525-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216387-6216431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6215238-6215316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6213749-6213810:-1:exon

LOC105053583
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053583 isoform X5
translation: MAEMEEGAKKREEEPINCYRAGFLAFNSRATMSVFLQEIVGLHMKMVTETLINVAANGETRQKFVDSHSLKFLVPLMLFESKIKGGEPSIIQWATESNMVDLRRTIVETGNCNAHP
SIO_010081: LOC105053583
subclass of: SO_0000673
so part of: LOC105053583
location: complement(join(6213775..6213794,6215238..6215316,6215450..6215502,6216227..6216269,6216387..6216431,6216525..6216608,6217011..6217037))
location: region:6213775-6217037:-1
so has part: feature:6217011-6217037:-1:exon
so has part: feature:6216525-6216608:-1:exon
so has part: feature:6216387-6216431:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6215238-6215316:-1:exon
so has part: feature:6213775-6213794:-1:exon

XP_019709077.1
type: Protein
SIO_000068: ncbiprotein

position:6213775:-1
position: 6213775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6217011-6217037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216525-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216387-6216431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6215238-6215316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6213775-6213794:-1:exon

LOC105053583
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053583
product: uncharacterized LOC105053583, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019853513.2
SIO_010081: LOC105053583
subclass of: SO_0000673
so part of: LOC105053583
location: complement(join(6213819..6215316,6215450..6215502,6216227..6216269,6216405..6216431,6216525..6216608,6217011..6217386))
location: region:6213819-6217386:-1
so has part: feature:6217011-6217386:-1:exon
so has part: feature:6216525-6216608:-1:exon
so has part: feature:6216405-6216431:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6213819-6215316:-1:exon

position:6213819:-1
position: 6213819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6217011-6217386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216525-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216405-6216431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6213819-6215316:-1:exon

LOC105053583
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053583
product: uncharacterized LOC105053583, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019853512.2
SIO_010081: LOC105053583
subclass of: SO_0000673
so part of: LOC105053583
location: complement(join(6213819..6215316,6215450..6215502,6216227..6216269,6216387..6216431,6216525..6216608,6217011..6217386))
location: region:6213819-6217386:-1
so has part: feature:6217011-6217386:-1:exon
so has part: feature:6216525-6216608:-1:exon
so has part: feature:6216387-6216431:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6213819-6215316:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6217011-6217386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216525-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216387-6216431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6213819-6215316:-1:exon

LOC105053583
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053583
product: uncharacterized LOC105053583, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_019853519.2
SIO_010081: LOC105053583
subclass of: SO_0000673
so part of: LOC105053583
location: complement(join(6213819..6215316,6215450..6215502,6216227..6216269,6216387..6216431,6216525..6216608,6216815..6217386))
location: region:6213819-6217386:-1
so has part: feature:6216815-6217386:-1:exon
so has part: feature:6216525-6216608:-1:exon
so has part: feature:6216387-6216431:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6213819-6215316:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6216815-6217386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216525-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216387-6216431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6213819-6215316:-1:exon

LOC105053583
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053583
product: uncharacterized LOC105053583, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_019853517.2
SIO_010081: LOC105053583
subclass of: SO_0000673
so part of: LOC105053583
location: complement(join(6213819..6215316,6215450..6215502,6216227..6216269,6216525..6216608,6217011..6217380))
location: region:6213819-6217380:-1
so has part: feature:6217011-6217380:-1:exon
so has part: feature:6216525-6216608:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6213819-6215316:-1:exon

position:6217380:-1
position: 6217380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6217011-6217380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216525-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6213819-6215316:-1:exon

LOC105053583
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053583 isoform X4
translation: MAEMEEGAKKREEEPINCYRAGFLAFNSRATMSVFLQNVAANGETRQKFVDSHSLKFLVPLMLFESKIKGGEPSIIQWATESNMVDLRRTIVETGSELNKCGNSNFPYEQAKISFSSSSILC
SIO_010081: LOC105053583
subclass of: SO_0000673
so part of: LOC105053583
location: complement(join(6215155..6215316,6215450..6215502,6216227..6216269,6216525..6216608,6217011..6217037))
location: region:6215155-6217037:-1
so has part: feature:6217011-6217037:-1:exon
so has part: feature:6216525-6216608:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6215155-6215316:-1:exon

XP_019709076.1
type: Protein
SIO_000068: ncbiprotein

position:6215155:-1
position: 6215155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6217011-6217037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216525-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215155-6215316:-1:exon

LOC105053583
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053583 isoform X2
translation: MAEMEEGAKKREEEPINCYRAGFLAFNSRATMSVFLQEIVGLHMKMNVAANGETRQKFVDSHSLKFLVPLMLFESKIKGGEPSIIQWATESNMVDLRRTIVETGSELNKCGNSNFPYEQAKISFSSSSILC
SIO_010081: LOC105053583
subclass of: SO_0000673
so part of: LOC105053583
location: complement(join(6215155..6215316,6215450..6215502,6216227..6216269,6216405..6216431,6216525..6216608,6217011..6217037))
location: region:6215155-6217037:-1
so has part: feature:6217011-6217037:-1:exon
so has part: feature:6216525-6216608:-1:exon
so has part: feature:6216405-6216431:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6215155-6215316:-1:exon

XP_019709072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6217011-6217037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216525-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216405-6216431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6215155-6215316:-1:exon

LOC105053583
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053583 isoform X1
translation: MAEMEEGAKKREEEPINCYRAGFLAFNSRATMSVFLQEIVGLHMKMVTETLINVAANGETRQKFVDSHSLKFLVPLMLFESKIKGGEPSIIQWATESNMVDLRRTIVETGSELNKCGNSNFPYEQAKISFSSSSILC
SIO_010081: LOC105053583
subclass of: SO_0000673
so part of: LOC105053583
location: complement(join(6215155..6215316,6215450..6215502,6216227..6216269,6216387..6216431,6216525..6216608,6217011..6217037))
location: region:6215155-6217037:-1
so has part: feature:6217011-6217037:-1:exon
so has part: feature:6216525-6216608:-1:exon
so has part: feature:6216387-6216431:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6215155-6215316:-1:exon

XP_019709071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6217011-6217037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216525-6216608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216387-6216431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6215155-6215316:-1:exon

LOC105053583
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105053583 isoform X6
translation: MSVFLQEIVGLHMKMVTETLINVAANGETRQKFVDSHSLKFLVPLMLFESKIKGGEPSIIQWATESNMVDLRRTIVETGSELNKCGNSNFPYEQAKISFSSSSILC
SIO_010081: LOC105053583
subclass of: SO_0000673
so part of: LOC105053583
location: complement(join(6215155..6215316,6215450..6215502,6216227..6216269,6216387..6216431,6216525..6216542))
location: region:6215155-6216542:-1
so has part: feature:6216525-6216542:-1:exon
so has part: feature:6216387-6216431:-1:exon
so has part: feature:6216227-6216269:-1:exon
so has part: feature:6215450-6215502:-1:exon
so has part: feature:6215155-6215316:-1:exon

XP_019709078.1
type: Protein
SIO_000068: ncbiprotein

position:6216542:-1
position: 6216542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6216525-6216542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6216387-6216431:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216227-6216269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6215450-6215502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215155-6215316:-1:exon

LOC105053584
type: Gene
subclass of: SO_0000704
RO_0002162: 51953
gene: LOC105053584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6218152..6236873)
location: region:6218152-6236873:-1
so has part: feature:6218152-6236873:-1:exon
subclass of: SO_0000010

105053584
type: Gene
SIO_000068: ncbigene

position:6218152:-1
position: 6218152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6236873:-1
position: 6236873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6218152-6236873:-1:exon

LOC105053584
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053584
product: uncharacterized alpha-1,2-galactosyltransferase C1289.13c, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_010934804.3
SIO_010081: LOC105053584
subclass of: SO_0000673
so part of: LOC105053584
location: complement(join(6218152..6218527,6218662..6218922,6235892..6235982,6236220..6236252,6236329..6236873))
location: region:6218152-6236873:-1
so has part: feature:6236329-6236873:-1:exon
so has part: feature:6236220-6236252:-1:exon
so has part: feature:6235892-6235982:-1:exon
so has part: feature:6218662-6218922:-1:exon
so has part: feature:6218152-6218527:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6236329-6236873:-1:exon

position:6236329:-1
position: 6236329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6236220-6236252:-1:exon

position:6236220:-1
position: 6236220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6236252:-1
position: 6236252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6235892-6235982:-1:exon

position:6235892:-1
position: 6235892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6235982:-1
position: 6235982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6218662-6218922:-1:exon

position:6218662:-1
position: 6218662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6218922:-1
position: 6218922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6218152-6218527:-1:exon

position:6218527:-1
position: 6218527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105053584
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51953
gene: LOC105053584
product: uncharacterized alpha-1,2-galactosyltransferase C1289.13c, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_010934805.3
SIO_010081: LOC105053584
subclass of: SO_0000673
so part of: LOC105053584
location: complement(join(6218152..6218527,6218662..6218922,6235892..6235982,6236329..6236847))
location: region:6218152-6236847:-1
so has part: feature:6236329-6236847:-1:exon
so has part: feature:6235892-6235982:-1:exon
so has part: feature:6218662-6218922:-1:exon
so has part: feature:6218152-6218527:-1:exon

position:6236847:-1
position: 6236847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6236329-6236847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6235892-6235982:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6218662-6218922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6218152-6218527:-1:exon

LOC105053584
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable glycosyltransferase 6 isoform X2
translation: MAPRSSVRWTKSRAPNRRLWLLLSLPLLALASLHAAAAILRGANALGRRCALAGAEYSATSPPHPRPRIAMVSFSAEENSGGGGGRRSFRGVMDAVGGNKRAYTERMGYDFIDARRLVDPNRPPNWSKILAVRSHLRHYDWLFWNDAESILNVAIGYSGLQASPDLVVTEDFNGVNSGVFFFRRSEWSEKFLDTWWNQTSFVRFGSTLSGDNAAMKHLIDSLPSKELGDHVRVSPMQCLFNSYPWFPTWKNAYRLISSPLTTWRGAYSDGDFMVHLAGLDEKKKWIAKILRELREAGR
SIO_010081: LOC105053584
subclass of: SO_0000673
so part of: LOC105053584
location: complement(join(6218424..6218527,6218662..6218922,6235892..6235982,6236329..6236769))
location: region:6218424-6236769:-1
so has part: feature:6236329-6236769:-1:exon
so has part: feature:6235892-6235982:-1:exon
so has part: feature:6218662-6218922:-1:exon
so has part: feature:6218424-6218527:-1:exon

XP_010933107.1
type: Protein
SIO_000068: ncbiprotein

position:6218424:-1
position: 6218424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6236769:-1
position: 6236769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6236329-6236769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6235892-6235982:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6218662-6218922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6218424-6218527:-1:exon

LOC105053584
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51953
gene: LOC105053584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized alpha-1,2-galactosyltransferase C1289.13c isoform X1
translation: MAPRSSVRWTKSRAPNRRLWLLLSLPLLALASLHAAAAILRGANALGRRCALAGAEYSATSPPHPRPRIAMVSFSAEENSGGGGGRRSFRGVMDAVGGNKRAYTERMGYDFIDARRLVDPNRPPNWSKILAVRSHLRHYDWLFWNDADTVVTNPDISLESILNVAIGYSGLQASPDLVVTEDFNGVNSGVFFFRRSEWSEKFLDTWWNQTSFVRFGSTLSGDNAAMKHLIDSLPSKELGDHVRVSPMQCLFNSYPWFPTWKNAYRLISSPLTTWRGAYSDGDFMVHLAGLDEKKKWIAKILRELREAGR
SIO_010081: LOC105053584
subclass of: SO_0000673
so part of: LOC105053584
location: complement(join(6218424..6218527,6218662..6218922,6235892..6235982,6236220..6236252,6236329..6236769))
location: region:6218424-6236769:-1
so has part: feature:6236329-6236769:-1:exon
so has part: feature:6236220-6236252:-1:exon
so has part: feature:6235892-6235982:-1:exon
so has part: feature:6218662-6218922:-1:exon
so has part: feature:6218424-6218527:-1:exon

XP_010933106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6236329-6236769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6236220-6236252:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6235892-6235982:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6218662-6218922:-1:exon