Plutella xylostella chromosome 21, ilPluXylo3.1, whole genome shotgun sequence.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Plutellidae; Plutella.
REFSEQ INFORMATION: The reference sequence is identical to\nOW026568.1.\nAssembly name: ilPluXylo3.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the WELLCOME SANGER INSTITUTE on\n2022/03/10. The original whole-genome shotgun project has the\naccession CAKNZZ000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Plutella xylostella Annotation\n Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
vegetative incompatibility protein HET-E-1
COORDINATES: polyA evidence [ECO:0006239]
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
keratin, type II cytoskeletal 2 epidermal-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
mitochondrial inner membrane protein OXA1L
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
uncharacterized LOC125490156, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
uncharacterized LOC125490156, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
uncharacterized LOC125490156, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
uncharacterized LOC125490156, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
uncharacterized protein LOC125490156 isoform X1
uncharacterized protein LOC125490156 isoform X2
uncharacterized protein LOC125490156 isoform X3
uncharacterized protein LOC125490156 isoform X4
uncharacterized LOC125490156, transcript variant X5
uncharacterized protein LOC125490156 isoform X5
limbic system-associated membrane protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
general transcriptional corepressor CYC8-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
heterogeneous nuclear ribonucleoprotein M, transcript variant X2
heterogeneous nuclear ribonucleoprotein M, transcript variant X1
heterogeneous nuclear ribonucleoprotein M, transcript variant X3
heterogeneous nuclear ribonucleoprotein M isoform X1
heterogeneous nuclear ribonucleoprotein M isoform X2
cotranscriptional regulator FAM172A homolog
glycosylated lysosomal membrane protein A
probable tRNA (guanine(26)-N(2))-dimethyltransferase
lon protease homolog, mitochondrial, transcript variant X1
lon protease homolog, mitochondrial, transcript variant X2
lon protease homolog, mitochondrial isoform X1
lon protease homolog, mitochondrial isoform X2
conserved oligomeric Golgi complex subunit 5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64% coverage of the annotated genomic feature by RNAseq alignments
cytochrome b-c1 complex subunit 2, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, transcript variant X2
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, transcript variant X1
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X2
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
myogenesis-regulating glycosidase, transcript variant X1
myogenesis-regulating glycosidase, transcript variant X2
myogenesis-regulating glycosidase, transcript variant X3
myogenesis-regulating glycosidase isoform X1
myogenesis-regulating glycosidase, transcript variant X4
myogenesis-regulating glycosidase isoform X2
myogenesis-regulating glycosidase, transcript variant X5
myogenesis-regulating glycosidase isoform X3
myogenesis-regulating glycosidase, transcript variant X6
myogenesis-regulating glycosidase isoform X4
microtubule-associated protein futsch, transcript variant X2
microtubule-associated protein futsch, transcript variant X1
microtubule-associated protein futsch, transcript variant X3
microtubule-associated protein futsch, transcript variant X4
microtubule-associated protein futsch, transcript variant X5
microtubule-associated protein futsch isoform X2
microtubule-associated protein futsch isoform X1
microtubule-associated protein futsch isoform X3
microtubule-associated protein futsch isoform X4
facilitated trehalose transporter Tret1, transcript variant X2
facilitated trehalose transporter Tret1, transcript variant X1
facilitated trehalose transporter Tret1 isoform X1
facilitated trehalose transporter Tret1 isoform X2
uncharacterized oxidoreductase MexAM1_META1p0182
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
3-oxoacyl-[acyl-carrier-protein] reductase FabG
DDB1- and CUL4-associated factor 12 homolog
probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, transcript variant X3
probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial isoform X3
probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, transcript variant X2
probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, transcript variant X1
probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial isoform X1
probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial isoform X2
myogenesis-regulating glycosidase-like, transcript variant X1
myogenesis-regulating glycosidase-like, transcript variant X2
myogenesis-regulating glycosidase-like isoform X2
myogenesis-regulating glycosidase-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
vacuolar protein sorting-associated protein 33B
phosphatidylinositol 3-kinase catalytic subunit type 3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments
phosphatidylinositol 3-kinase catalytic subunit type 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
katanin p60 ATPase-containing subunit A-like 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
ras-specific guanine nucleotide-releasing factor 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
cytochrome P450 4C1, transcript variant X2
cytochrome P450 4C1, transcript variant X3
cytochrome P450 4C1, transcript variant X1
uncharacterized LOC105385281, transcript variant X1
uncharacterized LOC105385281, transcript variant X2
uncharacterized protein LOC105385281 isoform X2
uncharacterized protein LOC105385281 isoform X1
adipokinetic hormone/corazonin-related peptide receptor variant I
general transcription and DNA repair factor IIH helicase subunit XPD
U3 small nucleolar RNA-associated protein 15 homolog
protein prenyltransferase alpha subunit repeat-containing protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
actin-binding Rho-activating protein, transcript variant X1
actin-binding Rho-activating protein, transcript variant X2
actin-binding Rho-activating protein isoform X1
actin-binding Rho-activating protein isoform X2
neuromedin-U receptor 1-like, transcript variant X2
neuromedin-U receptor 1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
ribose-phosphate pyrophosphokinase 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
ras GTPase-activating protein 1, transcript variant X4
ras GTPase-activating protein 1, transcript variant X3
ras GTPase-activating protein 1, transcript variant X1
ras GTPase-activating protein 1, transcript variant X2
ras GTPase-activating protein 1, transcript variant X6
ras GTPase-activating protein 1, transcript variant X5
ras GTPase-activating protein 1 isoform X2
ras GTPase-activating protein 1 isoform X1
ras GTPase-activating protein 1 isoform X3
E3 ubiquitin-protein ligase ariadne-1, transcript variant X1
E3 ubiquitin-protein ligase ariadne-1, transcript variant X2
E3 ubiquitin-protein ligase ariadne-1 isoform X1
E3 ubiquitin-protein ligase ariadne-1 isoform X2
uncharacterized LOC119691431, transcript variant X1
uncharacterized LOC119691431, transcript variant X2
sodium channel protein para, transcript variant X4
sodium channel protein para, transcript variant X3
sodium channel protein para, transcript variant X16
sodium channel protein para, transcript variant X19
sodium channel protein para, transcript variant X10
sodium channel protein para, transcript variant X12
sodium channel protein para, transcript variant X8
sodium channel protein para, transcript variant X14
sodium channel protein para, transcript variant X31
sodium channel protein para, transcript variant X35
sodium channel protein para, transcript variant X15
sodium channel protein para, transcript variant X6
sodium channel protein para, transcript variant X2
sodium channel protein para, transcript variant X26
sodium channel protein para, transcript variant X43
sodium channel protein para, transcript variant X27
sodium channel protein para, transcript variant X22
sodium channel protein para, transcript variant X29
sodium channel protein para, transcript variant X11
sodium channel protein para, transcript variant X7
sodium channel protein para, transcript variant X13
sodium channel protein para, transcript variant X9
sodium channel protein para, transcript variant X45
sodium channel protein para, transcript variant X47
sodium channel protein para, transcript variant X40
sodium channel protein para, transcript variant X30
sodium channel protein para, transcript variant X18
sodium channel protein para, transcript variant X5
sodium channel protein para, transcript variant X1
sodium channel protein para, transcript variant X25
sodium channel protein para, transcript variant X42
sodium channel protein para, transcript variant X33
sodium channel protein para, transcript variant X21
sodium channel protein para, transcript variant X28
sodium channel protein para, transcript variant X50
sodium channel protein para, transcript variant X38
sodium channel protein para, transcript variant X48
sodium channel protein para, transcript variant X24
sodium channel protein para, transcript variant X49
sodium channel protein para, transcript variant X39
sodium channel protein para, transcript variant X41
sodium channel protein para, transcript variant X20
sodium channel protein para, transcript variant X17
sodium channel protein para, transcript variant X37
sodium channel protein para, transcript variant X34
sodium channel protein para, transcript variant X36
sodium channel protein para, transcript variant X32
sodium channel protein para, transcript variant X44
sodium channel protein para, transcript variant X46
sodium channel protein para, transcript variant X23
probable phosphomevalonate kinase, transcript variant X2
probable phosphomevalonate kinase, transcript variant X1
ubiquitin-like protein 7, transcript variant X2
ubiquitin-like protein 7, transcript variant X1
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3
mitochondrial import inner membrane translocase subunit Tim29
probable 39S ribosomal protein L23, mitochondrial
tyrosine-protein phosphatase non-receptor type 9, transcript variant X2
tyrosine-protein phosphatase non-receptor type 9 isoform X2
tyrosine-protein phosphatase non-receptor type 9, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
tyrosine-protein phosphatase non-receptor type 9, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
tyrosine-protein phosphatase non-receptor type 9, transcript variant X1
tyrosine-protein phosphatase non-receptor type 9 isoform X1
tyrosine-protein phosphatase non-receptor type 9 isoform X3
tyrosine-protein phosphatase non-receptor type 9 isoform X4
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
bumetanide-sensitive sodium-(potassium)-chloride cotransporter, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
bumetanide-sensitive sodium-(potassium)-chloride cotransporter, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
bumetanide-sensitive sodium-(potassium)-chloride cotransporter isoform X1
bumetanide-sensitive sodium-(potassium)-chloride cotransporter isoform X2
40S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: BestRefSeq.
similar to RNA sequence, mRNA (same species):RefSeq:NM_001305539.1
annotated by transcript or proteomic data
The RefSeq transcript has 5 substitutions, 1 frameshift and aligns at 96% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
similar to AA sequence (same species):RefSeq:NP_001292468.1
The RefSeq protein has 1 frameshift and aligns at 98% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
tRNA-uridine aminocarboxypropyltransferase 2
synaptic vesicle glycoprotein 2B, transcript variant X2
synaptic vesicle glycoprotein 2B, transcript variant X1
synaptic vesicle glycoprotein 2B, transcript variant X3
ejaculatory bulb-specific protein 3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 79 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
ubiquitin-like modifier-activating enzyme ATG7
uncharacterized LOC105387067, transcript variant X1
uncharacterized LOC105387067, transcript variant X5
uncharacterized LOC105387067, transcript variant X4
uncharacterized LOC105387067, transcript variant X3
uncharacterized LOC105387067, transcript variant X7
uncharacterized LOC105387067, transcript variant X2
uncharacterized protein LOC105387067 isoform X1
uncharacterized protein LOC105387067 isoform X3
uncharacterized protein LOC105387067 isoform X2
uncharacterized protein LOC105387067 isoform X5
uncharacterized LOC105387067, transcript variant X6
uncharacterized protein LOC105387067 isoform X4
uncharacterized LOC105387067, transcript variant X8
uncharacterized protein LOC105387067 isoform X6
geranylgeranyl transferase type-1 subunit beta, transcript variant X2
geranylgeranyl transferase type-1 subunit beta, transcript variant X1
geranylgeranyl transferase type-1 subunit beta
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
dynein heavy chain, cytoplasmic, transcript variant X5
dynein heavy chain, cytoplasmic, transcript variant X1
dynein heavy chain, cytoplasmic, transcript variant X3
dynein heavy chain, cytoplasmic, transcript variant X4
dynein heavy chain, cytoplasmic, transcript variant X6
dynein heavy chain, cytoplasmic, transcript variant X2
dynein heavy chain, cytoplasmic isoform X5
dynein heavy chain, cytoplasmic isoform X1
dynein heavy chain, cytoplasmic isoform X3
dynein heavy chain, cytoplasmic isoform X4
dynein heavy chain, cytoplasmic isoform X6
dynein heavy chain, cytoplasmic isoform X2
furin-like protease 1, transcript variant X1
furin-like protease 1, transcript variant X4
furin-like protease 1, transcript variant X5
furin-like protease 1, transcript variant X2
furin-like protease 1, transcript variant X3
furin-like protease 1, transcript variant X6
uncharacterized LOC105390950, transcript variant X1
uncharacterized protein LOC105390950 isoform X1
uncharacterized LOC105390950, transcript variant X2
uncharacterized protein LOC105390950 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
alpha-tocopherol transfer protein-like, transcript variant X1
alpha-tocopherol transfer protein-like, transcript variant X4
alpha-tocopherol transfer protein-like, transcript variant X3
alpha-tocopherol transfer protein-like, transcript variant X2
alpha-tocopherol transfer protein-like isoform X1
alpha-tocopherol transfer protein-like isoform X2
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
centrosome-associated zinc finger protein CP190, transcript variant X1
centrosome-associated zinc finger protein CP190, transcript variant X2
centrosome-associated zinc finger protein CP190
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
probable ATP-dependent RNA helicase DHX34
probable alpha-ketoglutarate-dependent hypophosphite dioxygenase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
uncharacterized protein LOC105382792 isoform X27
tropomyosin-1, isoforms 9A/A/B isoform X30
tropomyosin-1, isoforms 9A/A/B isoform X31
tropomyosin-1, isoforms 9A/A/B isoform X34
tropomyosin-1, isoforms 9A/A/B isoform X29
tropomyosin-1, isoforms 9A/A/B isoform X28
tropomyosin-1, isoforms 9A/A/B isoform X32
tropomyosin-1, isoforms 9A/A/B isoform X33
tumor necrosis factor, alpha-induced protein 8-like protein 2 A, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
tumor necrosis factor, alpha-induced protein 8-like protein 2 A, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
tumor necrosis factor, alpha-induced protein 8-like protein 2 A isoform X2
tumor necrosis factor, alpha-induced protein 8-like protein 2 A isoform X1
OTU domain-containing protein 7B, transcript variant X1
OTU domain-containing protein 7B, transcript variant X2
OTU domain-containing protein 7B isoform X1
OTU domain-containing protein 7B isoform X2
V-type proton ATPase subunit D, transcript variant X2
V-type proton ATPase subunit D, transcript variant X1
V-type proton ATPase subunit D isoform X1
V-type proton ATPase subunit D isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase, transcript variant X1
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase, transcript variant X2
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase isoform X1
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase isoform X2
uncharacterized LOC105382785, transcript variant X1
uncharacterized LOC105382785, transcript variant X2
uncharacterized protein LOC105382785 isoform X1
uncharacterized protein LOC105382785 isoform X2
28S ribosomal protein S30, mitochondrial
eukaryotic translation initiation factor 2 subunit 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
uncharacterized LOC119690538, transcript variant X3
uncharacterized LOC119690538, transcript variant X2
uncharacterized LOC119690538, transcript variant X4
uncharacterized LOC119690538, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
uncharacterized LOC105384331, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC105384331, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
small conductance calcium-activated potassium channel protein, transcript variant X13
small conductance calcium-activated potassium channel protein, transcript variant X14
small conductance calcium-activated potassium channel protein, transcript variant X12
small conductance calcium-activated potassium channel protein, transcript variant X5
small conductance calcium-activated potassium channel protein, transcript variant X7
small conductance calcium-activated potassium channel protein, transcript variant X10
small conductance calcium-activated potassium channel protein, transcript variant X8
small conductance calcium-activated potassium channel protein, transcript variant X11
small conductance calcium-activated potassium channel protein, transcript variant X9
small conductance calcium-activated potassium channel protein, transcript variant X1
small conductance calcium-activated potassium channel protein, transcript variant X6
small conductance calcium-activated potassium channel protein, transcript variant X2
small conductance calcium-activated potassium channel protein, transcript variant X3
small conductance calcium-activated potassium channel protein, transcript variant X4
small conductance calcium-activated potassium channel protein isoform X13
small conductance calcium-activated potassium channel protein isoform X14
small conductance calcium-activated potassium channel protein isoform X12
small conductance calcium-activated potassium channel protein isoform X5
small conductance calcium-activated potassium channel protein isoform X7
small conductance calcium-activated potassium channel protein isoform X10
small conductance calcium-activated potassium channel protein isoform X8
small conductance calcium-activated potassium channel protein isoform X11
small conductance calcium-activated potassium channel protein isoform X9
small conductance calcium-activated potassium channel protein isoform X1
small conductance calcium-activated potassium channel protein isoform X6
small conductance calcium-activated potassium channel protein isoform X2
small conductance calcium-activated potassium channel protein isoform X3
small conductance calcium-activated potassium channel protein isoform X4
tyrosine--tRNA ligase, cytoplasmic, transcript variant X2
tyrosine--tRNA ligase, cytoplasmic, transcript variant X1
RNA polymerase II elongation factor Ell, transcript variant X1
RNA polymerase II elongation factor Ell, transcript variant X2
RNA polymerase II elongation factor Ell isoform X1
RNA polymerase II elongation factor Ell isoform X2
SURP and G-patch domain-containing protein 1, transcript variant X1
SURP and G-patch domain-containing protein 1, transcript variant X2
uncharacterized protein LOC105395908 isoform X1
SURP and G-patch domain-containing protein 1 isoform X2
membrane-anchored lipid-binding protein LAM4, transcript variant X2
membrane-anchored lipid-binding protein LAM4, transcript variant X1
membrane-anchored lipid-binding protein LAM4, transcript variant X3
uncharacterized protein LOC105395940 isoform X3
membrane-anchored lipid-binding protein LAM4, transcript variant X5
uncharacterized protein LOC105395940 isoform X5
membrane-anchored lipid-binding protein LAM4, transcript variant X4
membrane-anchored lipid-binding protein LAM4 isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
membrane-anchored lipid-binding protein LAM4, transcript variant X6
uncharacterized protein LOC105395940 isoform X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 83% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC105392892, transcript variant X1
uncharacterized LOC105392892, transcript variant X2
uncharacterized protein LOC105392892 isoform X2
uncharacterized protein LOC105392892 isoform X1
G-patch domain and KOW motifs-containing protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
uncharacterized LOC119693122, transcript variant X1
uncharacterized LOC119693122, transcript variant X2
dual specificity mitogen-activated protein kinase kinase dSOR1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
cytochrome c oxidase assembly protein COX16 homolog, mitochondrial
tyrosine-protein kinase CSK, transcript variant X2
tyrosine-protein kinase CSK, transcript variant X1
tyrosine-protein kinase CSK, transcript variant X3
tyrosine-protein kinase CSK, transcript variant X4
tyrosine-protein kinase CSK, transcript variant X5
uncharacterized LOC119693112, transcript variant X1
uncharacterized protein LOC119693112 isoform X1
uncharacterized LOC119693112, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
uncharacterized protein LOC119693112 isoform X2
tubulin polyglutamylase TTLL13, transcript variant X2
tubulin polyglutamylase TTLL13, transcript variant X1
tubulin polyglutamylase TTLL13 isoform X2
tubulin polyglutamylase TTLL13 isoform X1
tubulin polyglutamylase TTLL13, transcript variant X4
tubulin polyglutamylase TTLL13, transcript variant X3
tubulin polyglutamylase TTLL13 isoform X4
tubulin polyglutamylase TTLL13 isoform X3
methyl-CpG-binding domain protein 3, transcript variant X1
methyl-CpG-binding domain protein 3, transcript variant X2
methyl-CpG-binding domain protein 3 isoform X2
methyl-CpG-binding domain protein 3 isoform X1
probable phospholipid-transporting ATPase IM, transcript variant X8
probable phospholipid-transporting ATPase IM, transcript variant X7
probable phospholipid-transporting ATPase IM isoform X7
probable phospholipid-transporting ATPase IM, transcript variant X1
probable phospholipid-transporting ATPase IM, transcript variant X4
probable phospholipid-transporting ATPase IM, transcript variant X5
probable phospholipid-transporting ATPase IM, transcript variant X6
probable phospholipid-transporting ATPase IM, transcript variant X2
probable phospholipid-transporting ATPase IM, transcript variant X3
probable phospholipid-transporting ATPase IM isoform X1
probable phospholipid-transporting ATPase IM isoform X4
probable phospholipid-transporting ATPase IM isoform X5
probable phospholipid-transporting ATPase IM isoform X6
probable phospholipid-transporting ATPase IM isoform X2
probable phospholipid-transporting ATPase IM isoform X3
piggyBac transposable element-derived protein 4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 77% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
unconventional myosin-IXAa, transcript variant X6
unconventional myosin-IXAa, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
unconventional myosin-IXAa, transcript variant X5
unconventional myosin-IXAa, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
unconventional myosin-IXAa, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
unconventional myosin-IXAa, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
nonsense-mediated mRNA decay factor SMG5, transcript variant X1
nonsense-mediated mRNA decay factor SMG5, transcript variant X2
nonsense-mediated mRNA decay factor SMG5 isoform X1
nonsense-mediated mRNA decay factor SMG5 isoform X2
39S ribosomal protein L34, mitochondrial
uncharacterized LOC105396311, transcript variant X1
uncharacterized LOC105396311, transcript variant X2
uncharacterized protein LOC105396311 isoform X1
uncharacterized protein LOC105396311 isoform X2
voltage-dependent calcium channel subunit alpha-2/delta-3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
46 kDa FK506-binding nuclear protein, transcript variant X1
46 kDa FK506-binding nuclear protein, transcript variant X2
46 kDa FK506-binding nuclear protein isoform X2
46 kDa FK506-binding nuclear protein isoform X1
40S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: BestRefSeq.
similar to RNA sequence, mRNA (same species):RefSeq:NM_001305512.1
The RefSeq transcript has 3 substitutions, 1 non-frameshifting indel compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
Derived by automated computational analysis using gene prediction method: BestRefSeq.
ubiquitin carboxyl-terminal hydrolase 3, transcript variant X2
ubiquitin carboxyl-terminal hydrolase 3, transcript variant X1
cuticle protein 18.6, transcript variant X2
cuticle protein 18.6, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
secretory carrier-associated membrane protein 5B, transcript variant X2
secretory carrier-associated membrane protein 5B, transcript variant X1
secretory carrier-associated membrane protein 5B isoform X2
secretory carrier-associated membrane protein 1 isoform X1
furin-like protease 2, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
furin-like protease 2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
furin-like protease 2, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
furin-like protease 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
furin-like protease 2, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
furin-like protease 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transfer RNA serine (anticodon GCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
pupal cuticle protein Edg-91, transcript variant X1
pupal cuticle protein Edg-91, transcript variant X2
pupal cuticle protein Edg-91, transcript variant X3
pupal cuticle protein Edg-91, transcript variant X4
cold and drought-regulated protein CORA isoform X3
glycine-rich cell wall structural protein isoform X2
conserved oligomeric Golgi complex subunit 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
SKI family transcriptional corepressor 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
omega-amidase NIT2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
omega-amidase NIT2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
zinc finger protein ZFP2, transcript variant X3
zinc finger protein ZFP2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
zinc finger protein ZFP2, transcript variant X2
zinc finger protein ZFP2, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC105398387, transcript variant X1
uncharacterized LOC105398387, transcript variant X2
uncharacterized protein LOC105398387 isoform X1
uncharacterized protein LOC105398387 isoform X2
A-kinase anchor protein 17A, transcript variant X5
A-kinase anchor protein 17A, transcript variant X2
A-kinase anchor protein 17A, transcript variant X4
A-kinase anchor protein 17A, transcript variant X1
A-kinase anchor protein 17A, transcript variant X7
A-kinase anchor protein 17A, transcript variant X3
A-kinase anchor protein 17A, transcript variant X6
phenoloxidase-activating factor 3, transcript variant X2
phenoloxidase-activating factor 3, transcript variant X1
phenoloxidase-activating factor 3, transcript variant X3
uncharacterized protein LOC105391955 isoform X2
phenoloxidase-activating factor 3 isoform X1
phenoloxidase-activating factor 3 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC105391957, transcript variant X1
uncharacterized protein LOC105391957 isoform X1
uncharacterized LOC105391957, transcript variant X2
uncharacterized protein LOC105391957 isoform X2
uncharacterized LOC105393007, transcript variant X2
uncharacterized LOC105393007, transcript variant X1
uncharacterized protein LOC105393007 isoform X2
uncharacterized protein LOC105393007 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 83% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
valacyclovir hydrolase, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
valacyclovir hydrolase, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
valacyclovir hydrolase, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
autotransporter adhesin BpaC, transcript variant X1
autotransporter adhesin BpaC, transcript variant X2
uncharacterized protein LOC105393913 isoform X1
autotransporter adhesin BpaC, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
uncharacterized protein LOC105393913 isoform X3
uncharacterized LOC105393912, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
uncharacterized LOC105393912, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
uncharacterized LOC105393912, transcript variant X4
uncharacterized LOC105393912, transcript variant X1
uncharacterized protein LOC105393912 isoform X2
uncharacterized protein LOC105393912 isoform X1
uncharacterized LOC125488446, transcript variant X4
uncharacterized LOC125488446, transcript variant X3
uncharacterized LOC125488446, transcript variant X2
uncharacterized LOC125488446, transcript variant X1
uncharacterized protein LOC125488446 isoform X2
uncharacterized protein LOC125488446 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
lysine-specific histone demethylase 1A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
60S ribosomal protein L36; Derived by automated computational analysis using gene prediction method: BestRefSeq.
similar to RNA sequence, mRNA (same species):RefSeq:NM_001309155.1
The RefSeq transcript has 4 substitutions and aligns at 95% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
MATH and LRR domain-containing protein PFE0570w
transfer RNA phenylalanine (anticodon GAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
limbic system-associated membrane protein, transcript variant X2
limbic system-associated membrane protein, transcript variant X1
limbic system-associated membrane protein isoform X2
limbic system-associated membrane protein isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transfer RNA alanine (anticodon CGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC105385401, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
uncharacterized protein LOC105385401 isoform X2
uncharacterized LOC105385401, transcript variant X1
uncharacterized protein LOC105385401 isoform X1
phosphatidylinositol 5-phosphate 4-kinase type-2 alpha, transcript variant X2
phosphatidylinositol 5-phosphate 4-kinase type-2 alpha, transcript variant X4
phosphatidylinositol 5-phosphate 4-kinase type-2 alpha, transcript variant X1
phosphatidylinositol 5-phosphate 4-kinase type-2 alpha, transcript variant X3
phosphatidylinositol 5-phosphate 4-kinase type-2 alpha, transcript variant X5
phosphatidylinositol 5-phosphate 4-kinase type-2 alpha, transcript variant X6
phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X6
phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X5
phosphatidylinositol 5-phosphate 4-kinase type-2 beta isoform X4
phosphatidylinositol 5-phosphate 4-kinase type-2 beta isoform X2
phosphatidylinositol 5-phosphate 4-kinase type-2 beta isoform X3
phosphatidylinositol 5-phosphate 4-kinase type-2 beta isoform X1
leucine-rich repeat protein soc-2 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
A disintegrin and metalloproteinase with thrombospondin motifs 7, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
A disintegrin and metalloproteinase with thrombospondin motifs 7, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
A disintegrin and metalloproteinase with thrombospondin motifs 7
acetylcholine receptor subunit beta-like 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 135 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 66% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
acetylcholine receptor subunit alpha-like 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 228 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
acetylcholine receptor subunit alpha-like 2
uncharacterized LOC119693151, transcript variant X5
uncharacterized LOC119693151, transcript variant X3
uncharacterized LOC119693151, transcript variant X4
uncharacterized LOC119693151, transcript variant X1
uncharacterized LOC119693151, transcript variant X2
uncharacterized LOC119693151, transcript variant X6
uncharacterized protein LOC119693151 isoform X5
uncharacterized protein LOC119693151 isoform X3
uncharacterized protein LOC119693151 isoform X4
uncharacterized protein LOC119693151 isoform X2
uncharacterized protein LOC119693151 isoform X1
uncharacterized protein LOC119693151 isoform X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
serine protease Hayan, transcript variant X2
serine protease Hayan, transcript variant X1
transmembrane protease serine 9, transcript variant X2
transmembrane protease serine 9, transcript variant X1
transmembrane protease serine 9, transcript variant X3
transmembrane protease serine 9 isoform X2
transmembrane protease serine 9 isoform X3
heterogeneous nuclear ribonucleoprotein 27C, transcript variant X1
heterogeneous nuclear ribonucleoprotein 27C, transcript variant X2
heterogeneous nuclear ribonucleoprotein 27C, transcript variant X6
heterogeneous nuclear ribonucleoprotein 27C, transcript variant X8
heterogeneous nuclear ribonucleoprotein 27C, transcript variant X5
heterogeneous nuclear ribonucleoprotein 27C, transcript variant X3
heterogeneous nuclear ribonucleoprotein 27C, transcript variant X4
heterogeneous nuclear ribonucleoprotein 27C, transcript variant X7
heterogeneous nuclear ribonucleoprotein 27C, transcript variant X9
heterogeneous nuclear ribonucleoprotein 27C, transcript variant X10
heterogeneous nuclear ribonucleoprotein 27C isoform X8
heterogeneous nuclear ribonucleoprotein 27C isoform X1
heterogeneous nuclear ribonucleoprotein 27C isoform X2
heterogeneous nuclear ribonucleoprotein 27C isoform X6
heterogeneous nuclear ribonucleoprotein 27C isoform X5
heterogeneous nuclear ribonucleoprotein 27C isoform X3
heterogeneous nuclear ribonucleoprotein 27C isoform X4
heterogeneous nuclear ribonucleoprotein 27C isoform X7
heterogeneous nuclear ribonucleoprotein 27C isoform X10
heterogeneous nuclear ribonucleoprotein 27C isoform X9
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C
transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
alpha-tocopherol transfer protein, transcript variant X1
alpha-tocopherol transfer protein, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
collagen and calcium-binding EGF domain-containing protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
E3 ubiquitin-protein ligase RNF115, transcript variant X1
E3 ubiquitin-protein ligase RNF115, transcript variant X2
E3 ubiquitin-protein ligase RNF115, transcript variant X3
E3 ubiquitin-protein ligase RNF115 isoform X2
E3 ubiquitin-protein ligase RNF115 isoform X1
E3 ubiquitin-protein ligase Iruka isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
myotubularin-related protein 10-B, transcript variant X1
myotubularin-related protein 10-B, transcript variant X2
myotubularin-related protein 10-B isoform X1
myotubularin-related protein 10-B isoform X2
ral GTPase-activating protein subunit beta
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
retinoid-inducible serine carboxypeptidase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
mitochondrial import inner membrane translocase subunit TIM50-C
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
Bloom syndrome protein homolog, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Bloom syndrome protein homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
bumetanide-sensitive sodium-(potassium)-chloride cotransporter
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC105388616, transcript variant X1
uncharacterized LOC105388616, transcript variant X2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: zinc transporter ZIP3
uncharacterized LOC105388630, transcript variant X1
uncharacterized LOC105388630, transcript variant X4
uncharacterized LOC105388630, transcript variant X2
uncharacterized LOC105388630, transcript variant X3
uncharacterized protein LOC105388630 isoform X1
uncharacterized protein LOC105388630 isoform X3
uncharacterized protein LOC105388630 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70% coverage of the annotated genomic feature by RNAseq alignments
probable ribosome biogenesis protein RLP24
neither inactivation nor afterpotential protein G
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
zinc finger RNA-binding protein, transcript variant X2
zinc finger RNA-binding protein, transcript variant X5
zinc finger RNA-binding protein, transcript variant X4
zinc finger RNA-binding protein, transcript variant X3
zinc finger RNA-binding protein, transcript variant X6
zinc finger RNA-binding protein, transcript variant X1
zinc finger RNA-binding protein isoform X2
zinc finger RNA-binding protein isoform X5
zinc finger RNA-binding protein isoform X4
zinc finger RNA-binding protein isoform X3
zinc finger RNA-binding protein isoform X6
zinc finger RNA-binding protein isoform X1
immediate early response 3-interacting protein 1
uncharacterized LOC105395336, transcript variant X1
uncharacterized LOC105395336, transcript variant X2
uncharacterized protein LOC105395336 isoform X1
uncharacterized protein LOC105395336 isoform X2
uncharacterized LOC125490183, transcript variant X1
uncharacterized LOC125490183, transcript variant X2
phosphate carrier protein, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
beta-1,3-galactosyltransferase 5, transcript variant X2
beta-1,3-galactosyltransferase 5, transcript variant X1
beta-1,3-galactosyltransferase 5 isoform X2
beta-1,3-galactosyltransferase 5 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
beta-1,3-galactosyltransferase 5, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
beta-1,3-galactosyltransferase 5 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
poly(U)-binding-splicing factor half pint