Plutella xylostella chromosome 14, ilPluXylo3.1, whole genome shotgun sequence.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Plutellidae; Plutella.
REFSEQ INFORMATION: The reference sequence is identical to\nOW026567.1.\nAssembly name: ilPluXylo3.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the WELLCOME SANGER INSTITUTE on\n2022/03/10. The original whole-genome shotgun project has the\naccession CAKNZZ000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Plutella xylostella Annotation\n Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
prothoracicostatic peptides, transcript variant X3
COORDINATES: polyA evidence [ECO:0006239]
prothoracicostatic peptides, transcript variant X2
prothoracicostatic peptides, transcript variant X1
uncharacterized LOC125489411, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
uncharacterized LOC125489411, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
uncharacterized protein LOC125489411 isoform X1
uncharacterized protein LOC125489411 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84% coverage of the annotated genomic feature by RNAseq alignments
tRNA:m(4)X modification enzyme TRM13 homolog
ADP-ribosylation factor GTPase-activating protein 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
glucosamine-6-phosphate isomerase, transcript variant X1
glucosamine-6-phosphate isomerase, transcript variant X2
glucosamine-6-phosphate isomerase, transcript variant X5
glucosamine-6-phosphate isomerase, transcript variant X4
glucosamine-6-phosphate isomerase, transcript variant X3
glucosamine-6-phosphate isomerase isoform X2
glucosamine-6-phosphate isomerase isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
apoptosis-inducing factor 1, mitochondrial, transcript variant X1
apoptosis-inducing factor 1, mitochondrial, transcript variant X2
apoptosis-inducing factor 1, mitochondrial isoform X2
apoptosis-inducing factor 1, mitochondrial isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments
ubiquitin-fold modifier 1, transcript variant X2
ubiquitin-fold modifier 1, transcript variant X1
uncharacterized protein LOC105392102 isoform X1
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
apoptosis-inducing factor 1, mitochondrial-like
uncharacterized LOC105393977, transcript variant X2
uncharacterized LOC105393977, transcript variant X1
uncharacterized LOC105393977, transcript variant X4
uncharacterized LOC105393977, transcript variant X3
uncharacterized protein LOC105393977 isoform X4
uncharacterized protein LOC105393977 isoform X3
uncharacterized protein LOC105393977 isoform X2
uncharacterized protein LOC105393977 isoform X1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 67% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC125489514
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
malate synthase, glyoxysomal, transcript variant X2
malate synthase, glyoxysomal, transcript variant X5
malate synthase, glyoxysomal, transcript variant X3
malate synthase, glyoxysomal, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
uncharacterized protein LOC119694354 isoform X1
malate synthase, glyoxysomal, transcript variant X4
uncharacterized protein LOC119694354 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial, transcript variant X1
probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial, transcript variant X2
probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial isoform X1
probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
NEDD4 family-interacting protein 1, transcript variant X1
NEDD4 family-interacting protein 1, transcript variant X2
NEDD4 family-interacting protein 1 isoform X1
NEDD4 family-interacting protein 1 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
alpha-N-acetylgalactosaminidase, transcript variant X1
alpha-N-acetylgalactosaminidase, transcript variant X2
alpha-N-acetylgalactosaminidase isoform X1
alpha-N-acetylgalactosaminidase isoform X2
alpha-N-acetylgalactosaminidase, transcript variant X3
alpha-N-acetylgalactosaminidase isoform X3
uncharacterized LOC105392350, transcript variant X2
uncharacterized LOC105392350, transcript variant X1
uncharacterized protein LOC105392350 isoform X2
uncharacterized protein LOC105392350 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
WD repeat domain phosphoinositide-interacting protein 4
protein arginine methyltransferase NDUFAF7 homolog, mitochondrial
transfer RNA tryptophan (anticodon CCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
protein kinase C and casein kinase substrate in neurons protein 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
protein kinase C and casein kinase substrate in neurons protein 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
protein kinase C and casein kinase substrate in neurons protein 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
protein kinase C and casein kinase substrate in neurons protein 1 isoform X3
protein kinase C and casein kinase substrate in neurons protein 1 isoform X1
protein kinase C and casein kinase substrate in neurons protein 1 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
histidine-rich glycoprotein, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
histidine-rich glycoprotein, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, transcript variant X2
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, transcript variant X1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, transcript variant X3
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X2
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X3
galactose mutarotase, transcript variant X1
galactose mutarotase, transcript variant X2
galactose mutarotase, transcript variant X3
probable protein phosphatase 2C T23F11.1, transcript variant X3
probable protein phosphatase 2C T23F11.1, transcript variant X8
probable protein phosphatase 2C T23F11.1, transcript variant X1
probable protein phosphatase 2C T23F11.1, transcript variant X2
probable protein phosphatase 2C T23F11.1, transcript variant X7
probable protein phosphatase 2C T23F11.1, transcript variant X9
probable protein phosphatase 2C T23F11.1 isoform X1
probable protein phosphatase 2C T23F11.1 isoform X3
probable protein phosphatase 2C T23F11.1 isoform X2
probable protein phosphatase 2C T23F11.1 isoform X7
probable protein phosphatase 2C T23F11.1 isoform X5
probable protein phosphatase 2C T23F11.1 isoform X6
probable protein phosphatase 2C T23F11.1, transcript variant X4
probable protein phosphatase 2C T23F11.1, transcript variant X5
probable protein phosphatase 2C T23F11.1, transcript variant X6
probable protein phosphatase 2C T23F11.1 isoform X4
transient-receptor-potential-like protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
FMRFamide-related peptides, transcript variant X2
FMRFamide-related peptides, transcript variant X1
ras association domain-containing protein 10, transcript variant X4
ras association domain-containing protein 10, transcript variant X2
ras association domain-containing protein 10, transcript variant X5
ras association domain-containing protein 10, transcript variant X7
ras association domain-containing protein 10, transcript variant X3
ras association domain-containing protein 10, transcript variant X1
ras association domain-containing protein 10, transcript variant X6
ras association domain-containing protein 10 isoform X4
ras association domain-containing protein 10 isoform X2
ras association domain-containing protein 10 isoform X3
ras association domain-containing protein 10 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
cyclin-dependent kinase inhibitor 1, transcript variant X1
cyclin-dependent kinase inhibitor 1, transcript variant X2
cyclin-dependent kinase inhibitor 1, transcript variant X3
cyclin-dependent kinase inhibitor 1 isoform X1
cyclin-dependent kinase inhibitor 1 isoform X2
homeodomain-interacting protein kinase 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
homeodomain-interacting protein kinase 2, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
homeodomain-interacting protein kinase 2, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
homeodomain-interacting protein kinase 2, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
homeodomain-interacting protein kinase 2, transcript variant X3
homeodomain-interacting protein kinase 2, transcript variant X1
homeodomain-interacting protein kinase 2 isoform X5
homeodomain-interacting protein kinase 2 isoform X2
homeodomain-interacting protein kinase 2 isoform X6
homeodomain-interacting protein kinase 2 isoform X4
homeodomain-interacting protein kinase 2 isoform X3
homeodomain-interacting protein kinase 2 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 70% coverage of the annotated genomic feature by RNAseq alignments
nuclear transcription factor Y subunit alpha, transcript variant X3
nuclear transcription factor Y subunit alpha, transcript variant X1
nuclear transcription factor Y subunit alpha, transcript variant X2
nuclear transcription factor Y subunit alpha
N-alpha-acetyltransferase 15, NatA auxiliary subunit
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC119693946, transcript variant X2
uncharacterized LOC119693946, transcript variant X3
uncharacterized LOC119693946, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
alpha-(1,3)-fucosyltransferase C, transcript variant X1
alpha-(1,3)-fucosyltransferase C, transcript variant X2
alpha-(1,3)-fucosyltransferase C, transcript variant X3
alpha-(1,3)-fucosyltransferase C isoform X1
alpha-(1,3)-fucosyltransferase C isoform X2
alpha-(1,3)-fucosyltransferase C isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized protein DDB_G0283357-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
zinc finger CCHC domain-containing protein 10
T-complex protein 11-like protein 1, transcript variant X2
T-complex protein 11-like protein 1, transcript variant X3
T-complex protein 11-like protein 1, transcript variant X1
T-complex protein 11-like protein 1 isoform X1
T-complex protein 11-like protein 1 isoform X2
T-complex protein 11-like protein 1 isoform X3
RNA polymerase II-associated factor 1 homolog
nucleosome assembly protein 1-like 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
nucleosome assembly protein 1-like 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
nucleosome assembly protein 1-like 1, transcript variant X3
nucleosome assembly protein 1-like 1 isoform X1
nucleosome assembly protein 1-like 1 isoform X2
nucleosome assembly protein 1-like 1 isoform X3
stromal interaction molecule homolog, transcript variant X4
stromal interaction molecule homolog, transcript variant X3
stromal interaction molecule homolog, transcript variant X2
stromal interaction molecule homolog, transcript variant X1
stromal interaction molecule homolog, transcript variant X5
stromal interaction molecule homolog isoform X5
stromal interaction molecule homolog isoform X4
stromal interaction molecule homolog isoform X3
stromal interaction molecule homolog isoform X2
stromal interaction molecule homolog isoform X1
uncharacterized LOC105385731, transcript variant X1
uncharacterized LOC105385731, transcript variant X3
uncharacterized LOC105385731, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66% coverage of the annotated genomic feature by RNAseq alignments
carboxypeptidase B-like, transcript variant X4
carboxypeptidase B-like, transcript variant X3
carboxypeptidase B-like, transcript variant X2
carboxypeptidase B-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized protein K02A2.6-like, transcript variant X2
uncharacterized protein K02A2.6-like, transcript variant X1
uncharacterized protein LOC119693144 isoform X2
uncharacterized protein K02A2.6-like isoform X1
venom acid phosphatase Acph-1, transcript variant X2
venom acid phosphatase Acph-1 isoform X2
venom acid phosphatase Acph-1, transcript variant X1
venom acid phosphatase Acph-1 isoform X1
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00003
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 44% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: nucleotide motif:Rfam:12.0:RF00618
fibril-forming collagen alpha chain-like
general transcriptional corepressor trfA
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
helicostatins; Derived by automated computational analysis using gene prediction method: BestRefSeq.
similar to RNA sequence, mRNA (same species):RefSeq:NM_001309058.1
annotated by transcript or proteomic data
The RefSeq transcript has 9 substitutions, 2 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
similar to AA sequence (same species):RefSeq:NP_001295987.1
The RefSeq protein has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
COORDINATES: ab initio prediction:SignalP:4.0
telomere length and silencing protein 1 homolog, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
telomere length and silencing protein 1 homolog, transcript variant X1
telomere length and silencing protein 1 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
retrovirus-related Pol polyprotein from transposon TNT 1-94
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
uncharacterized LOC105398697, transcript variant X3
uncharacterized LOC105398697, transcript variant X2
uncharacterized LOC105398697, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
zinc finger CCCH domain-containing protein 11A, transcript variant X1
zinc finger CCCH domain-containing protein 11A, transcript variant X2
zinc finger CCCH domain-containing protein 11A
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
torso-like protein, transcript variant X2
torso-like protein, transcript variant X3
torso-like protein, transcript variant X1
transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 71% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
paired box protein Pax-6, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
paired box protein Pax-6, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
paired box protein Pax-6, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
paired box protein Pax-6, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
ankyrin repeat and sterile alpha motif domain-containing protein 1B, transcript variant X2
ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X2
ankyrin repeat and sterile alpha motif domain-containing protein 1B, transcript variant X1
ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X1
transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
ankyrin repeat and sterile alpha motif domain-containing protein 1B, transcript variant X3
uncharacterized protein LOC119690311 isoform X3
transcription factor SOX-5, transcript variant X2
transcription factor SOX-5, transcript variant X1
Hermansky-Pudlak syndrome 5 protein homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
probable cytochrome P450 301a1, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
RNA-binding protein 28, transcript variant X1
RNA-binding protein 28, transcript variant X2
transfer RNA alanine (anticodon AGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC105398188, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
uncharacterized LOC105398188, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
uncharacterized LOC105398188, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
uncharacterized protein LOC105398188 isoform X2
uncharacterized protein LOC105398188 isoform X1
probable ATP-dependent RNA helicase Dbp45A
toll-interacting protein B, transcript variant X2
toll-interacting protein B, transcript variant X1
myotubularin-related protein 6, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
myotubularin-related protein 6, transcript variant X3
myotubularin-related protein 6 isoform X3
myotubularin-related protein 6, transcript variant X2
myotubularin-related protein 6 isoform X2
uncharacterized protein LOC105398233 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
myb/SANT-like DNA-binding domain-containing protein 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
uncharacterized LOC105385349, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
uncharacterized LOC105385349, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 68% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC119694661, transcript variant X2
uncharacterized LOC119694661, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
cyclin-dependent kinase inhibitor 1C-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
nuclear pore complex protein Nup58, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
nuclear pore complex protein Nup58, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
nuclear pore complex protein Nup58 isoform X2
nuclear pore complex protein Nup58 isoform X1
putative transferase CAF17 homolog, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
brain tumor protein, transcript variant X3
brain tumor protein, transcript variant X1
brain tumor protein, transcript variant X2
brain tumor protein, transcript variant X11
brain tumor protein, transcript variant X10
brain tumor protein, transcript variant X6
brain tumor protein, transcript variant X5
brain tumor protein, transcript variant X9
brain tumor protein, transcript variant X7
brain tumor protein, transcript variant X8
brain tumor protein, transcript variant X4
brain tumor protein, transcript variant X12
uncharacterized LOC125489503, transcript variant X1
uncharacterized LOC125489503, transcript variant X3
uncharacterized LOC125489503, transcript variant X5
uncharacterized LOC125489503, transcript variant X2
uncharacterized LOC125489503, transcript variant X4
uncharacterized LOC125489503, transcript variant X6
transfer RNA glutamine (anticodon CUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial
malignant T-cell-amplified sequence 1 homolog, transcript variant X2
malignant T-cell-amplified sequence 1 homolog, transcript variant X1
malignant T-cell-amplified sequence 1 homolog isoform X2
malignant T-cell-amplified sequence 1 homolog isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
ankyrin repeat and LEM domain-containing protein 2 homolog, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
ankyrin repeat and LEM domain-containing protein 2 homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
ankyrin repeat and LEM domain-containing protein 2 homolog isoform X2
ankyrin repeat and LEM domain-containing protein 2 homolog isoform X1
transfer RNA arginine (anticodon UCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
xylosyl- and glucuronyltransferase LARGE2s
intraflagellar transport protein 57 homolog
myosin light chain kinase, smooth muscle, transcript variant X2
myosin light chain kinase, smooth muscle, transcript variant X1
myosin light chain kinase, smooth muscle isoform X1
myosin light chain kinase, smooth muscle isoform X2
40S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: BestRefSeq.
similar to RNA sequence, mRNA (same species):RefSeq:NM_001309082.1
The RefSeq transcript has 8 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
Derived by automated computational analysis using gene prediction method: BestRefSeq.
uncharacterized LOC105383505, transcript variant X1
uncharacterized LOC105383505, transcript variant X2
DNA-directed RNA polymerase III subunit RPC3
transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
cleavage and polyadenylation specificity factor subunit 6, transcript variant X1
cleavage and polyadenylation specificity factor subunit 6, transcript variant X4
cleavage and polyadenylation specificity factor subunit 6, transcript variant X3
cleavage and polyadenylation specificity factor subunit 6, transcript variant X6
cleavage and polyadenylation specificity factor subunit 6, transcript variant X2
cleavage and polyadenylation specificity factor subunit 6, transcript variant X5
cleavage and polyadenylation specificity factor subunit 6 isoform X1
cleavage and polyadenylation specificity factor subunit 6 isoform X4
cleavage and polyadenylation specificity factor subunit 6 isoform X3
cleavage and polyadenylation specificity factor subunit 6 isoform X6
cleavage and polyadenylation specificity factor subunit 6 isoform X2
cleavage and polyadenylation specificity factor subunit 6 isoform X5
proton-coupled amino acid transporter-like protein CG1139
transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
glutaredoxin domain-containing cysteine-rich protein CG31559
guanylate cyclase soluble subunit beta-1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
arylalkylamine N-acetyltransferase 1, transcript variant X1
arylalkylamine N-acetyltransferase 1, transcript variant X2
uncharacterized LOC119694362, transcript variant X1
uncharacterized LOC119694362, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
chitotriosidase-1, transcript variant X1
chitotriosidase-1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
AT-rich interactive domain-containing protein 2
uncharacterized LOC105388193, transcript variant X2
uncharacterized LOC105388193, transcript variant X1
uncharacterized protein LOC105388193 isoform X2
uncharacterized protein LOC105388193 isoform X1
60S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: BestRefSeq.
similar to RNA sequence, mRNA (same species):RefSeq:NM_001309125.1
The RefSeq transcript has 6 substitutions, 1 non-frameshifting indel compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
protein tumorous imaginal discs, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
putative uncharacterized transposon-derived protein F52C9.6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC125489478, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
uncharacterized LOC125489478, transcript variant X1
uncharacterized LOC105395340, transcript variant X2
uncharacterized LOC105395340, transcript variant X1
uncharacterized protein LOC105395340 isoform X2
uncharacterized protein LOC105395340 isoform X1
uncharacterized LOC105395339, transcript variant X1
uncharacterized LOC105395339, transcript variant X3
uncharacterized LOC105395339, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
LOW QUALITY PROTEIN: protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 87% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 76% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 78% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
uncharacterized LOC105393247, transcript variant X2
uncharacterized LOC105393247, transcript variant X1
uncharacterized LOC125489405, transcript variant X1
uncharacterized LOC125489405, transcript variant X2
activity-regulated cytoskeleton associated protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 4 bases at 4 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: activity-regulated cytoskeleton associated protein 2-like
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC119691805
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized protein LOC105389238 isoform X3
E3 ubiquitin-protein ligase SH3RF1, transcript variant X2
E3 ubiquitin-protein ligase SH3RF1, transcript variant X1
E3 ubiquitin-protein ligase SH3RF1, transcript variant X3
E3 ubiquitin-protein ligase SH3RF1 isoform X1
E3 ubiquitin-protein ligase SH3RF3 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
piggyBac transposable element-derived protein 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
LOW QUALITY PROTEIN: piggyBac transposable element-derived protein 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
general transcription factor II-I repeat domain-containing protein 2A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 81% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
uncharacterized LOC105392346, transcript variant X2
uncharacterized LOC105392346, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized protein LOC105392346 isoform X1
uncharacterized protein LOC105392346 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC125489487, transcript variant X1
uncharacterized LOC125489487, transcript variant X2
transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 63 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
GPI mannosyltransferase 3, transcript variant X1
GPI mannosyltransferase 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
DNA polymerase subunit gamma-1, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
ommochrome-binding protein, transcript variant X2
ommochrome-binding protein, transcript variant X1
ommochrome-binding protein, transcript variant X3
ommochrome-binding protein, transcript variant X5
ommochrome-binding protein, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
leucine-rich repeat-containing protein 24-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
leucine-rich repeat-containing protein 24
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
protein Fe65 homolog, transcript variant X2
protein Fe65 homolog, transcript variant X1
protein Fe65 homolog, transcript variant X3
protein Fe65 homolog, transcript variant X7
protein Fe65 homolog, transcript variant X5
protein Fe65 homolog, transcript variant X4
protein Fe65 homolog, transcript variant X6
protein Fe65 homolog, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC105391923, transcript variant X1
uncharacterized LOC105391923, transcript variant X2
uncharacterized LOC105391923, transcript variant X3
uncharacterized LOC105391923, transcript variant X5
uncharacterized LOC105391923, transcript variant X4
uncharacterized protein LOC105391923 isoform X1
uncharacterized protein LOC105391923 isoform X2
uncharacterized protein LOC105391923 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
endoplasmic reticulum-Golgi intermediate compartment protein 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
putative oxidoreductase GLYR1 homolog, transcript variant X6
putative oxidoreductase GLYR1 homolog isoform X6
putative oxidoreductase GLYR1 homolog, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
putative oxidoreductase GLYR1 homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
putative oxidoreductase GLYR1 homolog, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
putative oxidoreductase GLYR1 homolog, transcript variant X2
putative oxidoreductase GLYR1 homolog, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
putative oxidoreductase GLYR1 homolog isoform X5
putative oxidoreductase GLYR1 homolog isoform X4
putative oxidoreductase GLYR1 homolog isoform X3
putative oxidoreductase GLYR1 homolog isoform X2
putative oxidoreductase GLYR1 homolog isoform X1
immunoglobulin domain and leucine-rich repeat-containing protein 2, transcript variant X1
immunoglobulin domain and leucine-rich repeat-containing protein 2, transcript variant X2
uncharacterized protein LOC119694338 isoform X1
immunoglobulin domain and leucine-rich repeat-containing protein 2 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
pre-mRNA cleavage complex 2 protein Pcf11
probable asparagine--tRNA ligase, mitochondrial
Krueppel homolog 2, transcript variant X1
Krueppel homolog 2, transcript variant X2
ribosomal protein S3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
similar to RNA sequence, mRNA (same species):RefSeq:NM_001305477.1
facilitated trehalose transporter Tret1-2 homolog, transcript variant X1
facilitated trehalose transporter Tret1-2 homolog isoform X1
facilitated trehalose transporter Tret1-2 homolog, transcript variant X3
facilitated trehalose transporter Tret1-2 homolog isoform X3
facilitated trehalose transporter Tret1-2 homolog, transcript variant X2
facilitated trehalose transporter Tret1-2 homolog isoform X2
transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
GAS2-like protein 3, transcript variant X1
GAS2-like protein 3, transcript variant X2
eukaryotic translation initiation factor 2D
kinesin-like protein Klp68D, transcript variant X2
kinesin-like protein Klp68D, transcript variant X1
kinesin-like protein Klp68D, transcript variant X3
vacuolar protein sorting-associated protein 26C
lutropin-choriogonadotropic hormone receptor
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
pancreatic lipase-related protein 2, transcript variant X2
pancreatic lipase-related protein 2, transcript variant X1
pancreatic lipase-related protein 2 isoform X1