[Eubacterium] eligens ATCC 27750 plasmid unnamed, complete sequence.
Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae; Lachnospira.
Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla
Genomic and transcriptional studies of human gut bacteria suggest mutualistic relationship between model Bacteroidetes and Firmicutes
Submitted (03-JUN-2008) Center for Genome Sciences, Washington University in St. Louis, 4444 Forest Park Ave., St. Louis, MO 63108, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP001106.1.\nThis genome was sequenced by the Genome Sequencing Center,\nWashington University School of Medicine, Washington University in\nSt. Louis.\nSource DNA is available from Jeffrey I. Gordon, jgordon@wustl.edu.\nSource DNA is available from Jeffrey I. Gordon, jgordon@wustl.edu.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/12/2023 01:27:23\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,737\nCDSs (total) :: 2,671\nGenes (coding) :: 2,635\nCDSs (with protein) :: 2,635\nGenes (RNA) :: 66\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 4\nPseudo Genes (total) :: 36\nCDSs (without protein) :: 36\nPseudo Genes (ambiguous residues) :: 0 of 36\nPseudo Genes (frameshifted) :: 10 of 36\nPseudo Genes (incomplete) :: 30 of 36\nPseudo Genes (internal stop) :: 6 of 36\nPseudo Genes (multiple problems) :: 8 of 36\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_005349786.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_015567938.1
COORDINATES: similar to AA sequence:RefSeq:WP_015517454.1
COORDINATES: similar to AA sequence:RefSeq:WP_012744366.1
COORDINATES: protein motif:HMM:NF040306.1
COORDINATES: similar to AA sequence:RefSeq:WP_013274290.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004844968.1
COORDINATES: similar to AA sequence:RefSeq:WP_009533593.1
GO:0016407 - acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006442517.1
COORDINATES: similar to AA sequence:RefSeq:WP_015567934.1
COORDINATES: similar to AA sequence:RefSeq:WP_014794568.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008118584.1
COORDINATES: similar to AA sequence:RefSeq:WP_018596945.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015514811.1
COORDINATES: similar to AA sequence:RefSeq:WP_012939405.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009247295.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014081073.1
COORDINATES: similar to AA sequence:RefSeq:WP_014081074.1
COORDINATES: similar to AA sequence:RefSeq:WP_015552822.1
COORDINATES: similar to AA sequence:RefSeq:WP_015541216.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015541215.1
GO:0004459 - L-lactate dehydrogenase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005426682.1
COORDINATES: similar to AA sequence:RefSeq:WP_015541212.1
COORDINATES: similar to AA sequence:RefSeq:WP_014081078.1
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015528693.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_015515214.1
COORDINATES: similar to AA sequence:RefSeq:WP_009247128.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004842054.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015516996.1
COORDINATES: similar to AA sequence:RefSeq:WP_015516995.1
COORDINATES: similar to AA sequence:RefSeq:WP_010746705.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_009003678.1
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005880079.1
COORDINATES: similar to AA sequence:RefSeq:WP_012744339.1
COORDINATES: similar to AA sequence:RefSeq:WP_007488104.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012740335.1
COORDINATES: similar to AA sequence:RefSeq:WP_012740325.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008116280.1
COORDINATES: similar to AA sequence:RefSeq:WP_009247747.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014080793.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_010076488.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012741761.1
COORDINATES: similar to AA sequence:RefSeq:WP_004603977.1
COORDINATES: similar to AA sequence:RefSeq:WP_004603976.1
GO:0035673 - oligopeptide transmembrane transporter activity [Evidence IEA]
GO:0006857 - oligopeptide transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012740324.1
COORDINATES: similar to AA sequence:RefSeq:WP_003413287.1
GO:0008861 - formate C-acetyltransferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005602782.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024060.2
COORDINATES: protein motif:HMM:NF018271.2
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016296.2
LytTR family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003420051.1
GO:0004151 - dihydroorotase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF039422.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024396.2
COORDINATES: similar to AA sequence:RefSeq:WP_005421744.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
TIGR03915 family putative DNA repair protein
COORDINATES: similar to AA sequence:RefSeq:WP_008402327.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
putative DNA modification/repair radical SAM protein
COORDINATES: protein motif:HMM:NF024252.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:TIGR04223.1
COORDINATES: protein motif:HMM:NF016526.2
accessory gene regulator B family protein
COORDINATES: protein motif:HMM:NF025854.2
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: similar to AA sequence:RefSeq:WP_008118390.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015520617.1
COORDINATES: similar to AA sequence:RefSeq:WP_006855158.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008706808.1
COORDINATES: similar to AA sequence:RefSeq:WP_015568382.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012743681.1
COORDINATES: similar to AA sequence:RefSeq:WP_015516070.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_015516069.1
GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA]
GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004221802.1
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: similar to AA sequence:RefSeq:WP_014079024.1
COORDINATES: similar to AA sequence:RefSeq:WP_012738904.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009243209.1
GO:0003871 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015568819.1
COORDINATES: similar to AA sequence:RefSeq:WP_016304801.1
COORDINATES: similar to AA sequence:RefSeq:WP_004056527.1
COORDINATES: similar to AA sequence:RefSeq:WP_016304806.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF037716.2
COORDINATES: protein motif:HMM:NF015325.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007053444.1
low molecular weight phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015526525.1
COORDINATES: similar to AA sequence:RefSeq:WP_005330972.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: protein motif:HMM:NF024706.2
COORDINATES: similar to AA sequence:RefSeq:WP_008121114.1
COORDINATES: similar to AA sequence:RefSeq:WP_005922498.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008394334.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009987463.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
COORDINATES: similar to AA sequence:RefSeq:WP_004054754.1
GO:0004746 - riboflavin synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016149272.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF014919.2
COORDINATES: similar to AA sequence:RefSeq:WP_006574853.1
COORDINATES: similar to AA sequence:RefSeq:WP_016439313.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008116663.1
COORDINATES: similar to AA sequence:RefSeq:WP_007887418.1
COORDINATES: similar to AA sequence:RefSeq:WP_015528132.1
GO:0015969 - guanosine tetraphosphate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012743726.1
bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH
COORDINATES: similar to AA sequence:RefSeq:WP_002568723.1
GO:0004121 - cystathionine beta-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016521169.1
COORDINATES: similar to AA sequence:RefSeq:WP_004603603.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_004603602.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0006534 - cysteine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013614.2
SufD family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_008399953.1
COORDINATES: similar to AA sequence:RefSeq:WP_006599258.1
COORDINATES: protein motif:HMM:NF012772.2
GO:0071111 - cyclic-guanylate-specific phosphodiesterase activity [Evidence IEA]
GGDEF domain-containing phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_019163288.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008801484.1
GO:0033739 - preQ1 synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012740416.1
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005612349.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012740418.1
GO:0006400 - tRNA modification [Evidence IEA]
putative 7-carboxy-7-deazaguanine synthase QueE
COORDINATES: similar to AA sequence:RefSeq:WP_012740419.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006858457.1
COORDINATES: similar to AA sequence:RefSeq:WP_009447505.1
COORDINATES: similar to AA sequence:RefSeq:WP_012740422.1
COORDINATES: similar to AA sequence:RefSeq:WP_012740423.1
COORDINATES: similar to AA sequence:RefSeq:WP_008401175.1
COORDINATES: similar to AA sequence:RefSeq:WP_012743933.1
COORDINATES: similar to AA sequence:RefSeq:WP_012740428.1
COORDINATES: similar to AA sequence:RefSeq:WP_016321973.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_014079236.1
GO:0004803 - transposase activity [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005346842.1
COORDINATES: similar to AA sequence:RefSeq:WP_009295910.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
cysteine-rich KTR domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008119056.1
COORDINATES: similar to AA sequence:RefSeq:WP_002843504.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013852041.1
ClbS/DfsB family four-helix bundle protein
COORDINATES: similar to AA sequence:RefSeq:WP_012740437.1
COORDINATES: similar to AA sequence:RefSeq:WP_015521181.1
COORDINATES: similar to AA sequence:RefSeq:WP_012741139.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012577196.1
COORDINATES: similar to AA sequence:RefSeq:WP_006781785.1
COORDINATES: similar to AA sequence:RefSeq:WP_007047760.1
COORDINATES: similar to AA sequence:RefSeq:WP_009204218.1
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015514823.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009204408.1
COORDINATES: similar to AA sequence:RefSeq:WP_009861050.1
COORDINATES: similar to AA sequence:RefSeq:WP_006856866.1
COORDINATES: similar to AA sequence:RefSeq:WP_019161261.1
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012382.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_008704804.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: similar to AA sequence:RefSeq:WP_008703282.1
COORDINATES: protein motif:HMM:NF014351.2
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: protein motif:HMM:NF014685.2
GO:0051073 - adenosylcobinamide-GDP ribazoletransferase activity [Evidence IEA]; GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015560624.1
COORDINATES: protein motif:HMM:TIGR00379.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02467.1
bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase
COORDINATES: protein motif:HMM:TIGR00715.1
GO:0016994 - precorrin-6A reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009253283.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014006.2
COORDINATES: similar to AA sequence:RefSeq:WP_004845497.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016360235.1
cobalt-precorrin-5B (C(1))-methyltransferase CbiD
COORDINATES: similar to AA sequence:RefSeq:WP_019680989.1
COORDINATES: similar to AA sequence:RefSeq:WP_006426265.1
COORDINATES: similar to AA sequence:RefSeq:WP_008117947.1
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013648.2
ABC transporter substrate-binding protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014079944.1
GO:0016852 - sirohydrochlorin cobaltochelatase activity [Evidence IEA]
GO:0019251 - anaerobic cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014079943.1
cysteine-rich small domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008370871.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005333924.1
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006427168.1
COORDINATES: similar to AA sequence:RefSeq:WP_008391408.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
HI0074 family nucleotidyltransferase substrate-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008391410.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012740480.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004842938.1
COORDINATES: similar to AA sequence:RefSeq:WP_004842937.1
GO:0015295 - solute:proton symporter activity [Evidence IEA]
GO:0015718 - monocarboxylic acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012741421.1
FadR/GntR family transcriptional regulator
COORDINATES: nucleotide motif:Rfam:14.4:RF01831
THF riboswitches regulate genes encoding folate transporters and folate metabolism; They are most commonly found in Clostridiales and Lactobacillales; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR04518.1
folate family ECF transporter S component
COORDINATES: similar to AA sequence:RefSeq:WP_009245617.1
COORDINATES: similar to AA sequence:RefSeq:WP_012739644.1
COORDINATES: protein motif:HMM:NF024587.2
COORDINATES: similar to AA sequence:RefSeq:WP_015574028.1
COORDINATES: similar to AA sequence:RefSeq:WP_003534900.1
COORDINATES: similar to AA sequence:RefSeq:WP_015568894.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007885574.1
COORDINATES: similar to AA sequence:RefSeq:WP_015516930.1
threonine/serine exporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004845329.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005920768.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003705999.1
COORDINATES: protein motif:HMM:TIGR00254.1
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_006570779.1
GO:0008994 - rhamnulose-1-phosphate aldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012199173.1
GO:0008740 - L-rhamnose isomerase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO:0019299 - rhamnose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004063927.1
GO:0008993 - rhamnulokinase activity [Evidence IEA]
GO:0019301 - rhamnose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006772211.1
GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005928076.1
COORDINATES: similar to AA sequence:RefSeq:WP_002564835.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004841511.1
COORDINATES: similar to AA sequence:RefSeq:WP_002564837.1
GO:0055085 - transmembrane transport [Evidence IEA]
TRAP transporter substrate-binding protein DctP
COORDINATES: similar to AA sequence:RefSeq:WP_002575114.1
COORDINATES: similar to AA sequence:RefSeq:WP_008399828.1
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: similar to AA sequence:RefSeq:WP_005998816.1
COORDINATES: similar to AA sequence:RefSeq:WP_015515933.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
cysteine peptidase family C39 domain-containing protein
COORDINATES: protein motif:HMM:TIGR01573.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015529700.1
COORDINATES: similar to AA sequence:RefSeq:WP_015513356.1
COORDINATES: protein motif:HMM:NF014762.2
GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0046914 - transition metal ion binding [Evidence IEA]
iron dependent repressor, metal binding and dimerization domain protein
COORDINATES: similar to AA sequence:RefSeq:WP_015560776.1
COORDINATES: similar to AA sequence:RefSeq:WP_008116573.1
COORDINATES: similar to AA sequence:RefSeq:WP_007487986.1
COORDINATES: similar to AA sequence:RefSeq:WP_009289920.1
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_014314748.1
COORDINATES: protein motif:HMM:NF025015.2
COORDINATES: similar to AA sequence:RefSeq:WP_013400737.1
autorepressor SdpR family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_002834733.1
COORDINATES: protein motif:HMM:NF012234.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009527235.1
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: protein motif:HMM:TIGR00065.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024754.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008120140.1
COORDINATES: similar to AA sequence:RefSeq:WP_008402301.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]
SprT family zinc-dependent metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_015515292.1
COORDINATES: similar to AA sequence:RefSeq:WP_015520388.1
COORDINATES: similar to AA sequence:RefSeq:WP_008401060.1
COORDINATES: similar to AA sequence:RefSeq:WP_015515790.1
COORDINATES: similar to AA sequence:RefSeq:WP_005360421.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00182.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014573.2
COORDINATES: similar to AA sequence:RefSeq:WP_010232937.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
acetyl-CoA carboxylase carboxyltransferase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012740550.1
acetyl-CoA carboxylase carboxyl transferase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_003532011.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015523536.1
COORDINATES: similar to AA sequence:RefSeq:WP_014544923.1
COORDINATES: similar to AA sequence:RefSeq:WP_015732418.1
beta-ketoacyl-[acyl-carrier-protein] synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014544921.1
GO:0000036 - acyl carrier activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019474.2
COORDINATES: protein motif:HMM:NF025636.2
TetR/AcrR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013078.2
zinc dependent phospholipase C family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008117305.1
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_014078485.1
COORDINATES: similar to AA sequence:RefSeq:WP_008116909.1
COORDINATES: similar to AA sequence:RefSeq:WP_008116908.1
COORDINATES: similar to AA sequence:RefSeq:WP_005876957.1
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_015569210.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF024977.2
COORDINATES: protein motif:HMM:NF024594.2
COORDINATES: similar to AA sequence:RefSeq:WP_005950498.1
COORDINATES: protein motif:HMM:NF025574.2
COORDINATES: similar to AA sequence:RefSeq:WP_019679573.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: protein motif:HMM:NF014051.2
polysaccharide biosynthesis C-terminal domain-containing protein
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016145.2
polysaccharide pyruvyl transferase family protein
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF026247.2
COORDINATES: protein motif:HMM:NF024811.2
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004459680.1
COORDINATES: protein motif:HMM:NF014453.2
COORDINATES: similar to AA sequence:RefSeq:WP_006771750.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004715 - non-membrane spanning protein tyrosine kinase activity [Evidence IEA]; GO:0004713 - protein tyrosine kinase activity [Evidence IEA]
CpsD/CapB family tyrosine-protein kinase
COORDINATES: similar to AA sequence:RefSeq:WP_019161614.1
Wzz/FepE/Etk N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF039343.1
CpsB/CapC family capsule biosynthesis tyrosine phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_015542835.1
COORDINATES: similar to AA sequence:RefSeq:WP_005601880.1
lysophospholipid acyltransferase family protein
COORDINATES: protein motif:HMM:NF012863.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF013862.2
COORDINATES: similar to AA sequence:RefSeq:WP_005604018.1
GO:0000035 - acyl binding [Evidence IEA]; GO:0000036 - acyl carrier activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012711.2
class I adenylate-forming enzyme family protein
COORDINATES: protein motif:HMM:NF013702.2
TetR-like C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012245.2
COORDINATES: similar to AA sequence:RefSeq:WP_005331219.1
COORDINATES: similar to AA sequence:RefSeq:WP_016440140.1
COORDINATES: similar to AA sequence:RefSeq:WP_008118360.1
GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006565 - L-serine catabolic process [Evidence IEA]
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_010244392.1
L-serine ammonia-lyase, iron-sulfur-dependent subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_004052960.1
COORDINATES: protein motif:HMM:NF013782.2
GO:0016790 - thiolester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004056845.1
COORDINATES: similar to AA sequence:RefSeq:WP_004056847.1
ParB N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013711504.1
COORDINATES: similar to AA sequence:RefSeq:WP_016282395.1
COORDINATES: similar to AA sequence:RefSeq:WP_005604768.1
COORDINATES: similar to AA sequence:RefSeq:WP_006428503.1
GO:0005283 - amino acid:sodium symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008117275.1
COORDINATES: similar to AA sequence:RefSeq:WP_004611013.1
DeoR/GlpR family DNA-binding transcription regulator
GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008394327.1
COORDINATES: similar to AA sequence:RefSeq:WP_003516596.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016285620.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015533927.1
COORDINATES: similar to AA sequence:RefSeq:WP_005355389.1
COORDINATES: similar to AA sequence:RefSeq:WP_002849948.1
COORDINATES: similar to AA sequence:RefSeq:WP_014080431.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: protein motif:HMM:NF014679.2
GO:0005504 - fatty acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_005944701.1
COORDINATES: similar to AA sequence:RefSeq:WP_015554065.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008975358.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005336567.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_015516172.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_006856726.1
COORDINATES: similar to AA sequence:RefSeq:WP_015569330.1
GO:0015501 - glutamate:sodium symporter activity [Evidence IEA]
GO:0015813 - L-glutamate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005612235.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014081223.1
GO:0008784 - alanine racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004845429.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: protein motif:HMM:NF013827.2
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
rhomboid family intramembrane serine protease
COORDINATES: similar to AA sequence:RefSeq:WP_012744052.1
GO:0003796 - lysozyme activity [Evidence IEA]
GO:0016998 - cell wall macromolecule catabolic process [Evidence IEA]; GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013274000.1
COORDINATES: similar to AA sequence:RefSeq:WP_008704054.1
COORDINATES: similar to AA sequence:RefSeq:WP_016279028.1
COORDINATES: similar to AA sequence:RefSeq:WP_008402796.1
COORDINATES: similar to AA sequence:RefSeq:WP_015568594.1
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005934483.1
COORDINATES: similar to AA sequence:RefSeq:WP_009279078.1
COORDINATES: similar to AA sequence:RefSeq:WP_006857960.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005600928.1
phosphodiester glycosidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008116505.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015541669.1
COORDINATES: similar to AA sequence:RefSeq:WP_008982672.1
COORDINATES: similar to AA sequence:RefSeq:WP_005613127.1
COORDINATES: similar to AA sequence:RefSeq:WP_015541918.1
COORDINATES: similar to AA sequence:RefSeq:WP_004851283.1
COORDINATES: similar to AA sequence:RefSeq:WP_018591060.1
COORDINATES: similar to AA sequence:RefSeq:WP_008399929.1
COORDINATES: similar to AA sequence:RefSeq:WP_012740078.1
COORDINATES: protein motif:HMM:NF018837.2
COORDINATES: similar to AA sequence:RefSeq:WP_008401928.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019160758.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018598438.1
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006541 - glutamine metabolic process [Evidence IEA]
carbamoyl phosphate synthase small subunit
COORDINATES: protein motif:HMM:NF021028.2
COORDINATES: similar to AA sequence:RefSeq:WP_006776670.1
COORDINATES: protein motif:HMM:TIGR01097.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]
GO:0015716 - organic phosphonate transport [Evidence IEA]
phosphonate ABC transporter, permease protein PhnE
COORDINATES: protein motif:HMM:TIGR02315.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
phosphonate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014081221.1
PhnD/SsuA/transferrin family substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005422323.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008120242.1
PocR ligand-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016296308.1
GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
phosphoribosylaminoimidazolecarboxamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015549609.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01750
ZMP/ZTP riboswitches appear to regulate genes involved in one-carbon metabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
5-aminoimidazole-4-carboxamide ribonucleotide (ZMP)/ 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-triphosphate (ZMT)
COORDINATES: similar to AA sequence:RefSeq:WP_013279598.1
COORDINATES: similar to AA sequence:RefSeq:WP_016440732.1
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
bifunctional chorismate mutase/prephenate dehydratase
COORDINATES: protein motif:HMM:NF027787.2
COORDINATES: similar to AA sequence:RefSeq:WP_008401762.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005602203.1
COORDINATES: similar to AA sequence:RefSeq:WP_015517399.1
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008116313.1
COORDINATES: similar to AA sequence:RefSeq:WP_008116311.1
COORDINATES: protein motif:HMM:NF024637.2
COORDINATES: similar to AA sequence:RefSeq:WP_008393871.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005609288.1
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
pyridoxal 5'-phosphate synthase lyase subunit PdxS
COORDINATES: similar to AA sequence:RefSeq:WP_018165912.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
COORDINATES: similar to AA sequence:RefSeq:WP_014081060.1
COORDINATES: similar to AA sequence:RefSeq:WP_009427710.1
COORDINATES: similar to AA sequence:RefSeq:WP_009429434.1
GO:0110001 - toxin-antitoxin complex [Evidence IEA]
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: protein motif:HMM:NF021635.2
6-pyruvoyl-tetrahydropterin synthase-related protein
COORDINATES: protein motif:HMM:TIGR03112.1
COORDINATES: similar to AA sequence:RefSeq:WP_015535027.1
putative glycosyltransferase, exosortase G system-associated
COORDINATES: protein motif:HMM:TIGR03110.1
COORDINATES: similar to AA sequence:RefSeq:WP_008369789.1
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: similar to AA sequence:RefSeq:WP_015534688.1
COORDINATES: similar to AA sequence:RefSeq:WP_009661337.1
COORDINATES: similar to AA sequence:RefSeq:WP_014162386.1
COORDINATES: protein motif:HMM:NF012570.2
COORDINATES: similar to AA sequence:RefSeq:WP_016201511.1
COORDINATES: similar to AA sequence:RefSeq:WP_002564609.1
COORDINATES: similar to AA sequence:RefSeq:WP_004847428.1
COORDINATES: similar to AA sequence:RefSeq:WP_007708136.1
COORDINATES: similar to AA sequence:RefSeq:WP_015844581.1
GO:0015558 - secondary active p-aminobenzoyl-glutamate transmembrane transporter activity [Evidence IEA]
GO:1902604 - p-aminobenzoyl-glutamate transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_015549318.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_015548647.1
Lar family restriction alleviation protein
COORDINATES: similar to AA sequence:RefSeq:WP_009445430.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF012601.2
COORDINATES: similar to AA sequence:RefSeq:WP_006569658.1
COORDINATES: similar to AA sequence:RefSeq:WP_008151750.1
COORDINATES: similar to AA sequence:RefSeq:WP_005604085.1
GO:0071705 - nitrogen compound transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015512942.1
NTP transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009247682.1
COORDINATES: similar to AA sequence:RefSeq:WP_005602205.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015524640.1
COORDINATES: similar to AA sequence:RefSeq:WP_008401757.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0015970 - guanosine tetraphosphate biosynthetic process [Evidence IEA]
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_008119229.1
sugar phosphate isomerase/epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008119939.1
COORDINATES: similar to AA sequence:RefSeq:WP_008119944.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_008119946.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017509.2
COORDINATES: similar to AA sequence:RefSeq:WP_002584293.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012742791.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009460875.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003370483.1
COORDINATES: protein motif:HMM:NF016488.2
COORDINATES: protein motif:HMM:NF013155.2
GO:0004000 - adenosine deaminase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008974993.1
metal-dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: similar to AA sequence:RefSeq:WP_006860386.1
COORDINATES: similar to AA sequence:RefSeq:WP_018594335.1
GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
pyruvate formate-lyase-activating protein
COORDINATES: protein motif:HMM:NF012493.2
GO:0004386 - helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006855400.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00230
T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_004852776.1
COORDINATES: similar to AA sequence:RefSeq:WP_016518943.1
COORDINATES: similar to AA sequence:RefSeq:WP_012744148.1
COORDINATES: similar to AA sequence:RefSeq:WP_015513703.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009242210.1
COORDINATES: similar to AA sequence:RefSeq:WP_008703560.1
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]
fructose-specific PTS transporter subunit EIIC
COORDINATES: similar to AA sequence:RefSeq:WP_015513700.1
GO:0008662 - 1-phosphofructokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015548767.1
COORDINATES: protein motif:HMM:NF025298.2
COORDINATES: similar to AA sequence:RefSeq:WP_006428987.1
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016295509.1
GO:0015297 - antiporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015568838.1
COORDINATES: protein motif:HMM:NF017390.2
COORDINATES: protein motif:HMM:NF008277.0
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009325205.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013274426.1
COORDINATES: similar to AA sequence:RefSeq:WP_015567638.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013281832.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015568904.1
COORDINATES: similar to AA sequence:RefSeq:WP_013658123.1
GO:0008422 - beta-glucosidase activity [Evidence IEA]
GO:0030245 - cellulose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009248341.1
COORDINATES: protein motif:HMM:NF017927.2
COORDINATES: similar to AA sequence:RefSeq:WP_009015532.1
COORDINATES: similar to AA sequence:RefSeq:WP_009015533.1
COORDINATES: protein motif:HMM:NF012451.2
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015529319.1
COORDINATES: similar to AA sequence:RefSeq:WP_006861495.1
COORDINATES: similar to AA sequence:RefSeq:WP_005361282.1
COORDINATES: similar to AA sequence:RefSeq:WP_006857456.1
COORDINATES: similar to AA sequence:RefSeq:WP_002586212.1
COORDINATES: similar to AA sequence:RefSeq:WP_015559666.1
COORDINATES: similar to AA sequence:RefSeq:WP_005609711.1
COORDINATES: similar to AA sequence:RefSeq:WP_012740824.1
COORDINATES: similar to AA sequence:RefSeq:WP_014966986.1
COORDINATES: similar to AA sequence:RefSeq:WP_012740822.1
COORDINATES: similar to AA sequence:RefSeq:WP_005603877.1
COORDINATES: similar to AA sequence:RefSeq:WP_005603878.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015534628.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015534260.1
COORDINATES: similar to AA sequence:RefSeq:WP_005947935.1
COORDINATES: similar to AA sequence:RefSeq:WP_004603512.1
COORDINATES: similar to AA sequence:RefSeq:WP_008116515.1
GO:0015417 - ABC-type polyamine transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0015846 - polyamine transport [Evidence IEA]
polyamine ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008119210.1
COORDINATES: similar to AA sequence:RefSeq:WP_014078451.1
COORDINATES: similar to AA sequence:RefSeq:WP_015568178.1
COORDINATES: similar to AA sequence:RefSeq:WP_005347131.1
GO:0009927 - histidine phosphotransfer kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009202802.1
COORDINATES: similar to AA sequence:RefSeq:WP_005950099.1
COORDINATES: similar to AA sequence:RefSeq:WP_009306474.1
COORDINATES: similar to AA sequence:RefSeq:WP_009164090.1
COORDINATES: similar to AA sequence:RefSeq:WP_015534100.1
COORDINATES: protein motif:HMM:NF013670.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025851.2
glycoside hydrolase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014454183.1
COORDINATES: similar to AA sequence:RefSeq:WP_013270851.1
COORDINATES: similar to AA sequence:RefSeq:WP_008117139.1
COORDINATES: similar to AA sequence:RefSeq:WP_010297467.1
COORDINATES: similar to AA sequence:RefSeq:WP_004849165.1
COORDINATES: protein motif:HMM:NF012377.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015559632.1
COORDINATES: similar to AA sequence:RefSeq:WP_015541869.1
COORDINATES: similar to AA sequence:RefSeq:WP_003479936.1
COORDINATES: similar to AA sequence:RefSeq:WP_009267215.1
GO:0015486 - glycoside-pentoside-hexuronide:cation symporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0006812 - monoatomic cation transport [Evidence IEA]
glycoside-pentoside-hexuronide (GPH):cation symporter
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: similar to AA sequence:RefSeq:WP_005339176.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002566899.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016763.2
COORDINATES: similar to AA sequence:RefSeq:WP_008540153.1
COORDINATES: protein motif:HMM:NF037419.2
COORDINATES: similar to AA sequence:RefSeq:WP_004853714.1
COORDINATES: similar to AA sequence:RefSeq:WP_014256714.1
COORDINATES: similar to AA sequence:RefSeq:WP_006858809.1
COORDINATES: similar to AA sequence:RefSeq:WP_013976985.1
COORDINATES: similar to AA sequence:RefSeq:WP_015526587.1
COORDINATES: similar to AA sequence:RefSeq:WP_015541536.1
COORDINATES: similar to AA sequence:RefSeq:WP_002569265.1
COORDINATES: protein motif:HMM:NF018816.2
COORDINATES: similar to AA sequence:RefSeq:WP_006504784.1
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_015527712.1
type II toxin-antitoxin system RelB/DinJ family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_015533463.1
COORDINATES: similar to AA sequence:RefSeq:WP_008121197.1
COORDINATES: similar to AA sequence:RefSeq:WP_008121199.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015513120.1
GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015567999.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015515243.1
COORDINATES: similar to AA sequence:RefSeq:WP_012741426.1
COORDINATES: similar to AA sequence:RefSeq:WP_009204540.1
COORDINATES: similar to AA sequence:RefSeq:WP_014094669.1
COORDINATES: similar to AA sequence:RefSeq:WP_009250344.1
COORDINATES: similar to AA sequence:RefSeq:WP_004064868.1
COORDINATES: protein motif:HMM:TIGR00022.1
COORDINATES: similar to AA sequence:RefSeq:WP_007288075.1
GO:0016861 - intramolecular oxidoreductase activity, interconverting aldoses and ketoses [Evidence IEA]
GO:0019310 - inositol catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007718348.1
COORDINATES: similar to AA sequence:RefSeq:WP_015567824.1
COORDINATES: similar to AA sequence:RefSeq:WP_015534093.1
COORDINATES: similar to AA sequence:RefSeq:WP_007884694.1
radical SAM mobile pair system MarR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008713734.1
COORDINATES: similar to AA sequence:RefSeq:WP_012740420.1
COORDINATES: similar to AA sequence:RefSeq:WP_008119340.1
COORDINATES: similar to AA sequence:RefSeq:WP_005541172.1
COORDINATES: similar to AA sequence:RefSeq:WP_009145271.1
COORDINATES: similar to AA sequence:RefSeq:WP_013282464.1
GO:0003950 - NAD+ ADP-ribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_005539805.1
COORDINATES: similar to AA sequence:RefSeq:WP_006427164.1
COORDINATES: similar to AA sequence:RefSeq:WP_008401845.1
COORDINATES: similar to AA sequence:RefSeq:WP_012741418.1
COORDINATES: similar to AA sequence:RefSeq:WP_007887598.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014081104.1
COORDINATES: similar to AA sequence:RefSeq:WP_012740922.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015527717.1
COORDINATES: similar to AA sequence:RefSeq:WP_003693050.1
COORDINATES: similar to AA sequence:RefSeq:WP_005347237.1
COORDINATES: similar to AA sequence:RefSeq:WP_015567827.1
COORDINATES: similar to AA sequence:RefSeq:WP_005360235.1
COORDINATES: similar to AA sequence:RefSeq:WP_006858480.1
COORDINATES: similar to AA sequence:RefSeq:WP_005335435.1
COORDINATES: similar to AA sequence:RefSeq:WP_009345213.1
COORDINATES: protein motif:HMM:NF013752.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005360223.1
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: similar to AA sequence:RefSeq:WP_007886467.1
COORDINATES: similar to AA sequence:RefSeq:WP_007886465.1
COORDINATES: similar to AA sequence:RefSeq:WP_015514177.1