Jaculus jaculus isolate mJacJac1 chromosome Y, mJacJac1.mat.Y.cur, whole genome shotgun sequence.
type: Entry
definition: Jaculus jaculus isolate mJacJac1 chromosome Y, mJacJac1.mat.Y.cur, whole genome shotgun sequence.
sequence version: NC_059126.1
sequence date: 2021-11-17
sequence: sequence
division: CON
label: NC_059126.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA778790
dblink: SAMN20391724
keyword: WGS
keyword: RefSeq
source: Jaculus jaculus (lesser Egyptian jerboa)
organism: Jaculus jaculus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Dipodinae; Jaculus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM036413.1.\nAssembly name: mJacJac1.mat.Y.cur\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/11/04. The original whole-genome shotgun project has the\naccession JAJGSA000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 2021\nAssembly Method :: Trio HiCanu v. 2.1; purge_dups v. 1.2.3;\n Scaff10x v. 4.2; Bionano Solve v. 3.5.1;\n bwa v. 0.7.17; gcpp v. 1.9.0; Longranger\n Align v. 2.2.2; Freebayes v. 1.3.2; gEVAL\n manual curation v. 2021-05--07\nAssembly Name :: mJacJac1.mat.Y.cur\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 61.0x\nSequencing Technology :: PacBio Sequel II CLR 101X; 10X Gemonics\n linked reads 78X; Bionano Genomics DLS\n 182X; Arima Genomics Hi-C v1 60X\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Jaculus jaculus Annotation Release\n 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 11126800
topology: linear
so has quality: SO_0000987
location: 1..11126800
location: region:1-11126800:1
RO_0002162: 51337

NC_059126
type: RefSeq
SIO_000068: refseq

PRJNA778790
type: BioProject
SIO_000068: bioproject

SAMN20391724
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11126800:1
position: 11126800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-11126800:1:source
so part of: sequence
organism: Jaculus jaculus
mol type: genomic DNA
isolate: mJacJac1
chromosome: Y
sex: male
tissue type: liver, spleen
dev stage: adult
country: USA: San Diego
lat lon: 32.72 N 117.17 W
collection date: 2021-06-15
collected by: Kimberly Cooper

51337
type: Taxonomy
SIO_000068: taxonomy

LOC123457075
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457075
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(64496..65793)
location: region:64496-65793:-1
so has part: feature:64496-65793:-1:exon

123457075
type: Gene
SIO_000068: ncbigene

position:64496:-1
position: 64496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65793:-1
position: 65793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64496-65793:-1:exon

LOC123457075
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457075
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457075
subclass of: SO_0000673
so part of: LOC123457075
location: complement(64496..65793)
location: region:64496-65793:-1
so has part: feature:64496-65793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64496-65793:-1:exon

LOC123457085
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(131317..132706)
location: region:131317-132706:-1
so has part: feature:131317-132706:-1:exon

123457085
type: Gene
SIO_000068: ncbigene

position:131317:-1
position: 131317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132706:-1
position: 132706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131317-132706:-1:exon

LOC123457085
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457085
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457085
subclass of: SO_0000673
so part of: LOC123457085
location: complement(131317..132706)
location: region:131317-132706:-1
so has part: feature:131317-132706:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131317-132706:-1:exon

LOC123457037
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(242414..256455)
location: region:242414-256455:-1
so has part: feature:242414-256455:-1:exon

123457037
type: Gene
SIO_000068: ncbigene

position:242414:-1
position: 242414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256455:-1
position: 256455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242414-256455:-1:exon

LOC123457037
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457037
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457037
subclass of: SO_0000673
so part of: LOC123457037
location: complement(242414..242795)
location: region:242414-242795:-1
so has part: feature:242414-242795:-1:exon

position:242795:-1
position: 242795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242414-242795:-1:exon

LOC123457037
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457037
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457037
subclass of: SO_0000673
so part of: LOC123457037
location: complement(242867..243024)
location: region:242867-243024:-1
so has part: feature:242867-243024:-1:exon

position:242867:-1
position: 242867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243024:-1
position: 243024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242867-243024:-1:exon

LOC123457037
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457037
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457037
subclass of: SO_0000673
so part of: LOC123457037
location: complement(245685..245769)
location: region:245685-245769:-1
so has part: feature:245685-245769:-1:exon

position:245685:-1
position: 245685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245769:-1
position: 245769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245685-245769:-1:exon

LOC123457037
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457037
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457037
subclass of: SO_0000673
so part of: LOC123457037
location: complement(256365..256455)
location: region:256365-256455:-1
so has part: feature:256365-256455:-1:exon

position:256365:-1
position: 256365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256365-256455:-1:exon

LOC123457094
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457094
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(298681..298872)
location: region:298681-298872:-1
so has part: feature:298681-298872:-1:exon
subclass of: SO_0000623

123457094
type: Gene
SIO_000068: ncbigene

position:298681:-1
position: 298681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298872:-1
position: 298872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298681-298872:-1:exon

LOC123457094
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457094
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634874.1
SIO_010081: LOC123457094
subclass of: SO_0000673
so part of: LOC123457094
location: complement(298681..298872)
location: region:298681-298872:-1
so has part: feature:298681-298872:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:298681-298872:-1:exon

LOC123457091
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457091
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(787391..787581)
location: region:787391-787581:-1
so has part: feature:787391-787581:-1:exon
subclass of: SO_0000623

123457091
type: Gene
SIO_000068: ncbigene

position:787391:-1
position: 787391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787581:-1
position: 787581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:787391-787581:-1:exon

LOC123457091
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457091
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634871.1
SIO_010081: LOC123457091
subclass of: SO_0000673
so part of: LOC123457091
location: complement(787391..787581)
location: region:787391-787581:-1
so has part: feature:787391-787581:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:787391-787581:-1:exon

LOC123457038
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 821261..821738
location: region:821261-821738:1
so has part: feature:821261-821738:1:exon

123457038
type: Gene
SIO_000068: ncbigene

position:821261:1
position: 821261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821738:1
position: 821738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821261-821738:1:exon

LOC123457038
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457038
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
pseudo: true
SIO_010081: LOC123457038
subclass of: SO_0000673
so part of: LOC123457038
location: 821261..821738
location: region:821261-821738:1
so has part: feature:821261-821738:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:821261-821738:1:exon

LOC123457083
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 825663..839472
location: region:825663-839472:1
so has part: feature:825663-839472:1:exon
subclass of: SO_0000010

123457083
type: Gene
SIO_000068: ncbigene

position:825663:1
position: 825663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839472:1
position: 839472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825663-839472:1:exon

LOC123457083
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457083
product: gametocyte-specific factor 1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045141170.1
SIO_010081: LOC123457083
subclass of: SO_0000673
so part of: LOC123457083
location: join(825663..825743,827886..827929,830070..830170,832289..832415,833037..833120,833578..833644,836248..836329,837401..837434,839361..839472)
location: region:825663-839472:1
so has part: feature:825663-825743:1:exon
so has part: feature:827886-827929:1:exon
so has part: feature:830070-830170:1:exon
so has part: feature:832289-832415:1:exon
so has part: feature:833037-833120:1:exon
so has part: feature:833578-833644:1:exon
so has part: feature:836248-836329:1:exon
so has part: feature:837401-837434:1:exon
so has part: feature:839361-839472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:825663-825743:1:exon

position:825743:1
position: 825743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:827886-827929:1:exon

position:827886:1
position: 827886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827929:1
position: 827929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:830070-830170:1:exon

position:830070:1
position: 830070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830170:1
position: 830170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:832289-832415:1:exon

position:832289:1
position: 832289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832415:1
position: 832415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:833037-833120:1:exon

position:833037:1
position: 833037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833120:1
position: 833120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:833578-833644:1:exon

position:833578:1
position: 833578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833644:1
position: 833644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:836248-836329:1:exon

position:836248:1
position: 836248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836329:1
position: 836329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:837401-837434:1:exon

position:837401:1
position: 837401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837434:1
position: 837434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:839361-839472:1:exon

position:839361:1
position: 839361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123457083
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457083
product: gametocyte-specific factor 1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045141169.1
SIO_010081: LOC123457083
subclass of: SO_0000673
so part of: LOC123457083
location: join(826456..826485,827886..827929,830070..830170,832289..832415,833037..833120,833578..833644,836248..836329,837401..837434,839361..839472)
location: region:826456-839472:1
so has part: feature:826456-826485:1:exon
so has part: feature:827886-827929:1:exon
so has part: feature:830070-830170:1:exon
so has part: feature:832289-832415:1:exon
so has part: feature:833037-833120:1:exon
so has part: feature:833578-833644:1:exon
so has part: feature:836248-836329:1:exon
so has part: feature:837401-837434:1:exon
so has part: feature:839361-839472:1:exon

position:826456:1
position: 826456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826456-826485:1:exon

position:826485:1
position: 826485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:827886-827929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:830070-830170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:832289-832415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:833037-833120:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833578-833644:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:836248-836329:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:837401-837434:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:839361-839472:1:exon

LOC123457083
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1-like
translation: MDSPDPERLLQCPYVKSHHIRACRFPYHLIKCKKNHPDVAKNLATCPFNARHLVPRAELSHHISICDDRCCIEQDEVNPTRNPGQDTLPKNTWQYPPCDEDWDLELAEENNSTPFIWGTTRFCENKCPVSNAAMEPKSNLASGKQVPKTLPWKTVDMDSN
SIO_010081: LOC123457083
subclass of: SO_0000673
so part of: LOC123457083
location: join(827929,830070..830170,832289..832415,833037..833120,833578..833644,836248..836329,837401..837421)
location: region:827929-837421:1
so has part: feature:827929-827929:1:exon
so has part: feature:830070-830170:1:exon
so has part: feature:832289-832415:1:exon
so has part: feature:833037-833120:1:exon
so has part: feature:833578-833644:1:exon
so has part: feature:836248-836329:1:exon
so has part: feature:837401-837421:1:exon

XP_044997104.1
type: Protein
SIO_000068: ncbiprotein

position:837421:1
position: 837421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:827929-827929:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:830070-830170:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:832289-832415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833037-833120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:833578-833644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836248-836329:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:837401-837421:1:exon

LOC123457083
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1-like
translation: MDSPDPERLLQCPYVKSHHIRACRFPYHLIKCKKNHPDVAKNLATCPFNARHLVPRAELSHHISICDDRCCIEQDEVNPTRNPGQDTLPKNTWQYPPCDEDWDLELAEENNSTPFIWGTTRFCENKCPVSNAAMEPKSNLASGKQVPKTLPWKTVDMDSN
SIO_010081: LOC123457083
subclass of: SO_0000673
so part of: LOC123457083
location: join(827929,830070..830170,832289..832415,833037..833120,833578..833644,836248..836329,837401..837421)
location: region:827929-837421:1
so has part: feature:827929-827929:1:exon
so has part: feature:830070-830170:1:exon
so has part: feature:832289-832415:1:exon
so has part: feature:833037-833120:1:exon
so has part: feature:833578-833644:1:exon
so has part: feature:836248-836329:1:exon
so has part: feature:837401-837421:1:exon

XP_044997105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:827929-827929:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:830070-830170:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:832289-832415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833037-833120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:833578-833644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836248-836329:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:837401-837421:1:exon

LOC123457039
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457039
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 865490..880930
location: region:865490-880930:1
so has part: feature:865490-880930:1:exon
subclass of: SO_0000010

123457039
type: Gene
SIO_000068: ncbigene

position:865490:1
position: 865490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880930:1
position: 880930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:865490-880930:1:exon

LOC123457039
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457039
product: gametocyte-specific factor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045141141.1
SIO_010081: LOC123457039
subclass of: SO_0000673
so part of: LOC123457039
location: join(865490..865529,870847..870947,873367..873493,874112..874195,874648..874714,877175..877257,880653..880720,880856..880930)
location: region:865490-880930:1
so has part: feature:865490-865529:1:exon
so has part: feature:870847-870947:1:exon
so has part: feature:873367-873493:1:exon
so has part: feature:874112-874195:1:exon
so has part: feature:874648-874714:1:exon
so has part: feature:877175-877257:1:exon
so has part: feature:880653-880720:1:exon
so has part: feature:880856-880930:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:865490-865529:1:exon

position:865529:1
position: 865529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:870847-870947:1:exon

position:870847:1
position: 870847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870947:1
position: 870947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:873367-873493:1:exon

position:873367:1
position: 873367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873493:1
position: 873493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:874112-874195:1:exon

position:874112:1
position: 874112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874195:1
position: 874195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:874648-874714:1:exon

position:874648:1
position: 874648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874714:1
position: 874714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:877175-877257:1:exon

position:877175:1
position: 877175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877257:1
position: 877257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:880653-880720:1:exon

position:880653:1
position: 880653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880720:1
position: 880720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:880856-880930:1:exon

position:880856:1
position: 880856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123457039
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457039
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1-like
translation: MEKLFYDLIFLNGVESPDPERLLQCPYDKKHRIRACRFPYHLIKCKKNHPDVAKQLATCPFNARHLVPRAELSHHISICDDRCCIEQDEVIPTRNPGEDTLPKSTLQHPPCDEDWDKELAEVNNSTPFIWGTSSFCDNKCPVSNTAMEHISNLESGKQVPKTLPWKNNFNSVSKVHVYSDTKEEKFRSLMVLEESSLSLLSKDSYLLYSKFNDI
SIO_010081: LOC123457039
subclass of: SO_0000673
so part of: LOC123457039
location: join(865490..865529,870847..870947,873367..873493,874112..874195,874648..874714,877175..877257,880653..880720,880856..880930)
location: region:865490-880930:1
so has part: feature:865490-865529:1:exon
so has part: feature:870847-870947:1:exon
so has part: feature:873367-873493:1:exon
so has part: feature:874112-874195:1:exon
so has part: feature:874648-874714:1:exon
so has part: feature:877175-877257:1:exon
so has part: feature:880653-880720:1:exon
so has part: feature:880856-880930:1:exon

XP_044997076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:865490-865529:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870847-870947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873367-873493:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:874112-874195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:874648-874714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:877175-877257:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:880653-880720:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:880856-880930:1:exon

LOC123457040
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1016896..1167566)
location: region:1016896-1167566:-1
so has part: feature:1016896-1167566:-1:exon

123457040
type: Gene
SIO_000068: ncbigene

position:1016896:-1
position: 1016896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167566:-1
position: 1167566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016896-1167566:-1:exon

LOC123457040
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457040
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
pseudo: true
SIO_010081: LOC123457040
subclass of: SO_0000673
so part of: LOC123457040
location: complement(1016896..1017351)
location: region:1016896-1017351:-1
so has part: feature:1016896-1017351:-1:exon

position:1017351:-1
position: 1017351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016896-1017351:-1:exon

LOC123457040
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457040
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
pseudo: true
SIO_010081: LOC123457040
subclass of: SO_0000673
so part of: LOC123457040
location: complement(1167477..1167566)
location: region:1167477-1167566:-1
so has part: feature:1167477-1167566:-1:exon

position:1167477:-1
position: 1167477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1167477-1167566:-1:exon

LOC123457098
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457098
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1181012..1181118)
location: region:1181012-1181118:-1
so has part: feature:1181012-1181118:-1:exon
subclass of: SO_0000623

123457098
type: Gene
SIO_000068: ncbigene

position:1181012:-1
position: 1181012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181118:-1
position: 1181118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1181012-1181118:-1:exon

LOC123457098
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457098
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634877.1
SIO_010081: LOC123457098
subclass of: SO_0000673
so part of: LOC123457098
location: complement(1181012..1181118)
location: region:1181012-1181118:-1
so has part: feature:1181012-1181118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1181012-1181118:-1:exon

LOC123457041
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1231260..1252239
location: region:1231260-1252239:1
so has part: feature:1231260-1252239:1:exon
subclass of: SO_0000010

123457041
type: Gene
SIO_000068: ncbigene

position:1231260:1
position: 1231260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252239:1
position: 1252239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1231260-1252239:1:exon

LOC123457041
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457041
product: heat shock transcription factor, Y-linked-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_045141142.1
SIO_010081: LOC123457041
subclass of: SO_0000673
so part of: LOC123457041
location: join(1231260..1231766,1232260..1232452,1252175..1252239)
location: region:1231260-1252239:1
so has part: feature:1231260-1231766:1:exon
so has part: feature:1232260-1232452:1:exon
so has part: feature:1252175-1252239:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1231260-1231766:1:exon

position:1231766:1
position: 1231766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1232260-1232452:1:exon

position:1232260:1
position: 1232260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1232452:1
position: 1232452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1252175-1252239:1:exon

position:1252175:1
position: 1252175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123457041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock transcription factor, Y-linked-like
translation: MAQVPSEIQDIYPKDGSPVSDALVKSRPCDNTLLEDTGLMAKVEETAFQLLCQQSLITHPCCALCVNDPQEDSDFFSLTFPKKLWKIVESNKFKSVCWDEEGTSIVINVELFKKEVLERKPPFRIFETNSMNSLVRQLNLYGFSKVQQNCQRSASLDDFMAEEKEGSAKFKFYRNPNFIRGHPHLLLRMKRRVGVKNASRATASLVPEFNSTLRTQNNIDKHNCGLVDEAREQKKGNLAAEENVHSVLNVHCVK
SIO_010081: LOC123457041
subclass of: SO_0000673
so part of: LOC123457041
location: join(1231260..1231766,1232260..1232452,1252175..1252239)
location: region:1231260-1252239:1
so has part: feature:1231260-1231766:1:exon
so has part: feature:1232260-1232452:1:exon
so has part: feature:1252175-1252239:1:exon

XP_044997077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1231260-1231766:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1232260-1232452:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1252175-1252239:1:exon

LOC123457139
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457139
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1248680..1248806)
location: region:1248680-1248806:-1
so has part: feature:1248680-1248806:-1:exon
subclass of: SO_0000578

123457139
type: Gene
SIO_000068: ncbigene

position:1248680:-1
position: 1248680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248806:-1
position: 1248806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248680-1248806:-1:exon

LOC123457139
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snoRNA
gene: LOC123457139
product: small nucleolar RNA SNORA33
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00438
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634913.1
SIO_010081: LOC123457139
subclass of: SO_0000673
so part of: LOC123457139
location: complement(1248680..1248806)
location: region:1248680-1248806:-1
so has part: feature:1248680-1248806:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1248680-1248806:-1:exon

LOC123457133
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457133
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1276942..1277007)
location: region:1276942-1277007:-1
so has part: feature:1276942-1277007:-1:exon
subclass of: SO_0000578

123457133
type: Gene
SIO_000068: ncbigene

position:1276942:-1
position: 1276942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277007:-1
position: 1277007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1276942-1277007:-1:exon

LOC123457133
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snoRNA
gene: LOC123457133
product: small nucleolar RNA SNORD43
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00221
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634907.1
SIO_010081: LOC123457133
subclass of: SO_0000673
so part of: LOC123457133
location: complement(1276942..1277007)
location: region:1276942-1277007:-1
so has part: feature:1276942-1277007:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1276942-1277007:-1:exon

LOC123457134
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457134
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1356347..1356537
location: region:1356347-1356537:1
so has part: feature:1356347-1356537:1:exon
subclass of: SO_0000623

123457134
type: Gene
SIO_000068: ncbigene

position:1356347:1
position: 1356347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1356537:1
position: 1356537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1356347-1356537:1:exon

LOC123457134
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457134
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634908.1
SIO_010081: LOC123457134
subclass of: SO_0000673
so part of: LOC123457134
location: 1356347..1356537
location: region:1356347-1356537:1
so has part: feature:1356347-1356537:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1356347-1356537:1:exon

LOC123457042
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457042
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1408092..1457300)
location: region:1408092-1457300:-1
so has part: feature:1408092-1457300:-1:exon
subclass of: SO_0000010

123457042
type: Gene
SIO_000068: ncbigene

position:1408092:-1
position: 1408092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1457300:-1
position: 1457300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1408092-1457300:-1:exon

LOC123457042
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457042
product: deleted in azoospermia protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045141143.1
SIO_010081: LOC123457042
subclass of: SO_0000673
so part of: LOC123457042
location: complement(join(1408092..1408139,1410402..1410434,1410995..1411066,1414128..1414199,1416782..1416853,1419796..1419867,1422928..1422999,1426103..1426174,1429082..1429153,1432231..1432302,1435284..1435355,1438335..1438406,1441695..1441834,1441942..1442005,1442782..1442833,1443569..1443660,1444471..1444617,1445312..1445458,1454494..1454665,1457239..1457300))
location: region:1408092-1457300:-1
so has part: feature:1457239-1457300:-1:exon
so has part: feature:1454494-1454665:-1:exon
so has part: feature:1445312-1445458:-1:exon
so has part: feature:1444471-1444617:-1:exon
so has part: feature:1443569-1443660:-1:exon
so has part: feature:1442782-1442833:-1:exon
so has part: feature:1441942-1442005:-1:exon
so has part: feature:1441695-1441834:-1:exon
so has part: feature:1438335-1438406:-1:exon
so has part: feature:1435284-1435355:-1:exon
so has part: feature:1432231-1432302:-1:exon
so has part: feature:1429082-1429153:-1:exon
so has part: feature:1426103-1426174:-1:exon
so has part: feature:1422928-1422999:-1:exon
so has part: feature:1419796-1419867:-1:exon
so has part: feature:1416782-1416853:-1:exon
so has part: feature:1414128-1414199:-1:exon
so has part: feature:1410995-1411066:-1:exon
so has part: feature:1410402-1410434:-1:exon
so has part: feature:1408092-1408139:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1457239-1457300:-1:exon

position:1457239:-1
position: 1457239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1454494-1454665:-1:exon

position:1454494:-1
position: 1454494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1454665:-1
position: 1454665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1445312-1445458:-1:exon

position:1445312:-1
position: 1445312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445458:-1
position: 1445458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1444471-1444617:-1:exon

position:1444471:-1
position: 1444471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1444617:-1
position: 1444617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1443569-1443660:-1:exon

position:1443569:-1
position: 1443569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1443660:-1
position: 1443660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1442782-1442833:-1:exon

position:1442782:-1
position: 1442782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442833:-1
position: 1442833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1441942-1442005:-1:exon

position:1441942:-1
position: 1441942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442005:-1
position: 1442005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1441695-1441834:-1:exon

position:1441695:-1
position: 1441695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441834:-1
position: 1441834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1438335-1438406:-1:exon

position:1438335:-1
position: 1438335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1438406:-1
position: 1438406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1435284-1435355:-1:exon

position:1435284:-1
position: 1435284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1435355:-1
position: 1435355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1432231-1432302:-1:exon

position:1432231:-1
position: 1432231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1432302:-1
position: 1432302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1429082-1429153:-1:exon

position:1429082:-1
position: 1429082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1429153:-1
position: 1429153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1426103-1426174:-1:exon

position:1426103:-1
position: 1426103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1426174:-1
position: 1426174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1422928-1422999:-1:exon

position:1422928:-1
position: 1422928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422999:-1
position: 1422999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1419796-1419867:-1:exon

position:1419796:-1
position: 1419796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1419867:-1
position: 1419867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1416782-1416853:-1:exon

position:1416782:-1
position: 1416782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416853:-1
position: 1416853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1414128-1414199:-1:exon

position:1414128:-1
position: 1414128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414199:-1
position: 1414199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1410995-1411066:-1:exon

position:1410995:-1
position: 1410995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1411066:-1
position: 1411066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1410402-1410434:-1:exon

position:1410402:-1
position: 1410402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410434:-1
position: 1410434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1408092-1408139:-1:exon

position:1408139:-1
position: 1408139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123457042
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457042
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deleted in azoospermia protein 3-like
translation: MVVSLECEELLLCWAFKGRLWVVCGTWEWGRTSAVLDLKVCLVNSVEGLDILLGVCLQGLFVVSQEELELLLVWPLMQSAATSKNPNSAISREASTQTSSAATSQAYVLPEGRVIPNTVFVGGIDARATATSETPNSPISIKISTQTSSAATSQDYVLPEGKVMPNTVFVCGIDVRMDETEIRGVFARFGSVKEVKIISDRYGLSKGYGFVSFYNDVDVQKIVESQITFHGKKLKLGPAIRKQNLSAHHVQPCPLNFNSPQPPFQSVGSSPNTENCMQSPAILNHPVTQYVQAYSPYQSSPVQVTTGYQLPVNNHQTYPPYQSSPVQMTSGYQLPVYNHQAYPPHQSSPVQVTTGYQLPVHNYQAYPSYQSSAVQETTGYQLPAYNHQAYPPYQSSAVQVTTGYQLPVYNHQAYPPYQSSAVQVTTGYQLPLYNHQAYPTYQSSPVQVTTGYQVPVYNYQAYPTYQSSPVQVTTGYQVPVYNYQAYPPYQSSAVQVTTGYQLPLYNHQAYPTYQSSPVQVTTGYQVPVYNYQIAPHCPSEEERRNLWTKAHSWWSPIC
SIO_010081: LOC123457042
subclass of: SO_0000673
so part of: LOC123457042
location: complement(join(1408092..1408139,1410402..1410434,1410995..1411066,1414128..1414199,1416782..1416853,1419796..1419867,1422928..1422999,1426103..1426174,1429082..1429153,1432231..1432302,1435284..1435355,1438335..1438406,1441695..1441834,1441942..1442005,1442782..1442833,1443569..1443660,1444471..1444617,1445312..1445458,1454494..1454665,1457239..1457300))
location: region:1408092-1457300:-1
so has part: feature:1457239-1457300:-1:exon
so has part: feature:1454494-1454665:-1:exon
so has part: feature:1445312-1445458:-1:exon
so has part: feature:1444471-1444617:-1:exon
so has part: feature:1443569-1443660:-1:exon
so has part: feature:1442782-1442833:-1:exon
so has part: feature:1441942-1442005:-1:exon
so has part: feature:1441695-1441834:-1:exon
so has part: feature:1438335-1438406:-1:exon
so has part: feature:1435284-1435355:-1:exon
so has part: feature:1432231-1432302:-1:exon
so has part: feature:1429082-1429153:-1:exon
so has part: feature:1426103-1426174:-1:exon
so has part: feature:1422928-1422999:-1:exon
so has part: feature:1419796-1419867:-1:exon
so has part: feature:1416782-1416853:-1:exon
so has part: feature:1414128-1414199:-1:exon
so has part: feature:1410995-1411066:-1:exon
so has part: feature:1410402-1410434:-1:exon
so has part: feature:1408092-1408139:-1:exon

XP_044997078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1457239-1457300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1454494-1454665:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1445312-1445458:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1444471-1444617:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1443569-1443660:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1442782-1442833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1441942-1442005:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1441695-1441834:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1438335-1438406:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1435284-1435355:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1432231-1432302:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1429082-1429153:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1426103-1426174:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1422928-1422999:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1419796-1419867:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1416782-1416853:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1414128-1414199:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1410995-1411066:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1410402-1410434:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1408092-1408139:-1:exon

LOC101598353
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC101598353
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1536789..1537713
location: region:1536789-1537713:1
so has part: feature:1536789-1537713:1:exon
subclass of: SO_0000010

101598353
type: Gene
SIO_000068: ncbigene

position:1536789:1
position: 1536789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1537713:1
position: 1537713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1536789-1537713:1:exon

LOC101598353
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC101598353
product: 2-aminoethanethiol dioxygenase
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012951949.2
SIO_010081: LOC101598353
subclass of: SO_0000673
so part of: LOC101598353
location: 1536789..1537713
location: region:1536789-1537713:1
so has part: feature:1536789-1537713:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1536789-1537713:1:exon

LOC101598353
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC101598353
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1537033..1537035,aa:OTHER)
transl except: (pos:1537465..1537467,aa:OTHER)
product: LOW QUALITY PROTEIN: 2-aminoethanethiol dioxygenase
translation: MPRDNMASLIQRIARQACLTFRGGAASGPEPASGAGFPENLSKLKHLLTQVRAEDLNIALRQAPQQPLPPHLPPVTYMHIYXTDGFSLGVFLLKSGTSIPLHDHPGMHGMLKVLYGTVRISCMDKLEAAAGEQRPRAPPPEQQFEPPLQPREREAARPGVLRSRAEYTEASGPCILTPHRDNLHQIDAVDGPAAFLDILAPPYDPDEGRDCHYYRMLEPVRPKETXASSSACDLPREVWLLETPQADDFWCEGEPYPGPKVFP
SIO_010081: LOC101598353
subclass of: SO_0000673
so part of: LOC101598353
location: 1536789..1537581
location: region:1536789-1537581:1
so has part: feature:1536789-1537581:1:exon

XP_012807403.2
type: Protein
SIO_000068: ncbiprotein

position:1537581:1
position: 1537581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1536789-1537581:1:exon

LOC123457043
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457043
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1857599..1858033
location: region:1857599-1858033:1
so has part: feature:1857599-1858033:1:exon

123457043
type: Gene
SIO_000068: ncbigene

position:1857599:1
position: 1857599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1858033:1
position: 1858033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1857599-1858033:1:exon

LOC123457043
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457043
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457043
subclass of: SO_0000673
so part of: LOC123457043
location: 1857599..1858033
location: region:1857599-1858033:1
so has part: feature:1857599-1858033:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1857599-1858033:1:exon

LOC123457102
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457102
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1905062..1905166
location: region:1905062-1905166:1
so has part: feature:1905062-1905166:1:exon
subclass of: SO_0000623

123457102
type: Gene
SIO_000068: ncbigene

position:1905062:1
position: 1905062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1905166:1
position: 1905166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1905062-1905166:1:exon

LOC123457102
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457102
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634881.1
SIO_010081: LOC123457102
subclass of: SO_0000673
so part of: LOC123457102
location: 1905062..1905166
location: region:1905062-1905166:1
so has part: feature:1905062-1905166:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1905062-1905166:1:exon

LOC123457101
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457101
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1926569..1926758
location: region:1926569-1926758:1
so has part: feature:1926569-1926758:1:exon
subclass of: SO_0000623

123457101
type: Gene
SIO_000068: ncbigene

position:1926569:1
position: 1926569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1926758:1
position: 1926758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1926569-1926758:1:exon

LOC123457101
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457101
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634880.1
SIO_010081: LOC123457101
subclass of: SO_0000673
so part of: LOC123457101
location: 1926569..1926758
location: region:1926569-1926758:1
so has part: feature:1926569-1926758:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1926569-1926758:1:exon

LOC123457036
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2030741..2031351)
location: region:2030741-2031351:-1
so has part: feature:2030741-2031351:-1:exon

123457036
type: Gene
SIO_000068: ncbigene

position:2030741:-1
position: 2030741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2031351:-1
position: 2031351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2030741-2031351:-1:exon

LOC123457036
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC123457036
subclass of: SO_0000673
so part of: LOC123457036
location: complement(2030741..2031351)
location: region:2030741-2031351:-1
so has part: feature:2030741-2031351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2030741-2031351:-1:exon

LOC123457109
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457109
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2077475..2077581
location: region:2077475-2077581:1
so has part: feature:2077475-2077581:1:exon
subclass of: SO_0000623

123457109
type: Gene
SIO_000068: ncbigene

position:2077475:1
position: 2077475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2077581:1
position: 2077581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2077475-2077581:1:exon

LOC123457109
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457109
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634887.1
SIO_010081: LOC123457109
subclass of: SO_0000673
so part of: LOC123457109
location: 2077475..2077581
location: region:2077475-2077581:1
so has part: feature:2077475-2077581:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2077475-2077581:1:exon

LOC123457106
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457106
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(2156420..2156519)
location: region:2156420-2156519:-1
so has part: feature:2156420-2156519:-1:exon

123457106
type: Gene
SIO_000068: ncbigene

position:2156420:-1
position: 2156420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2156519:-1
position: 2156519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2156420-2156519:-1:exon

LOC123457106
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123457106
subclass of: SO_0000673
so part of: LOC123457106
location: complement(2156420..2156519)
location: region:2156420-2156519:-1
so has part: feature:2156420-2156519:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2156420-2156519:-1:exon

LOC123457044
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457044
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2189100..2192626)
location: region:2189100-2192626:-1
so has part: feature:2189100-2192626:-1:exon
subclass of: SO_0000010

123457044
type: Gene
SIO_000068: ncbigene

position:2189100:-1
position: 2189100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2192626:-1
position: 2192626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2189100-2192626:-1:exon

LOC123457044
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457044
product: heat shock transcription factor, X-linked member 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_045141144.1
SIO_010081: LOC123457044
subclass of: SO_0000673
so part of: LOC123457044
location: complement(join(2189100..2189687,2192135..2192626))
location: region:2189100-2192626:-1
so has part: feature:2192135-2192626:-1:exon
so has part: feature:2189100-2189687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2192135-2192626:-1:exon

position:2192135:-1
position: 2192135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2189100-2189687:-1:exon

position:2189687:-1
position: 2189687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123457044
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457044
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock transcription factor, X-linked member 3-like
translation: MNTQSINKNDKSFGKPVVGEEPARAAPSEASCDPNRNTRGGSEAQSDQGMSQDPRLGENLETEEQDHHEASEEGTSNLLGLSFPRKLWAVVENEDFKSVGWSEEGDTVKIEGDLFEAEVLHRSGADKIFEMDSLKCFTCELNLHGFRKIRTKNSPVHSGKKKMMIFQNANFQRDNPRLLENIWRRGCQRSPAQEEPCCKRRKLVCPRRSPHLPKKKQEKTISVKEAPNKQAPQGQDTFLPAGVTGCPLALCPPEEHSIPCGECSPEDGNMVSPAGDRMEGSGQVSIRSSWYPDWGSVISFYNKCSSMLKAALAAISLSELSDGEREQGSTSESSAEEEQEGFHQNKCVICVLYKDSSRS
SIO_010081: LOC123457044
subclass of: SO_0000673
so part of: LOC123457044
location: complement(join(2189100..2189687,2192135..2192626))
location: region:2189100-2192626:-1
so has part: feature:2192135-2192626:-1:exon
so has part: feature:2189100-2189687:-1:exon

XP_044997079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2192135-2192626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2189100-2189687:-1:exon

LOC123457045
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457045
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2252825..2253838)
location: region:2252825-2253838:-1
so has part: feature:2252825-2253838:-1:exon

123457045
type: Gene
SIO_000068: ncbigene

position:2252825:-1
position: 2252825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2253838:-1
position: 2253838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2252825-2253838:-1:exon

LOC123457045
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457045
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457045
subclass of: SO_0000673
so part of: LOC123457045
location: complement(2252825..2253838)
location: region:2252825-2253838:-1
so has part: feature:2252825-2253838:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2252825-2253838:-1:exon

LOC123457046
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2260746..2266304
location: region:2260746-2266304:1
so has part: feature:2260746-2266304:1:exon

123457046
type: Gene
SIO_000068: ncbigene

position:2260746:1
position: 2260746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2266304:1
position: 2266304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2260746-2266304:1:exon

LOC123457046
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457046
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC123457046
subclass of: SO_0000673
so part of: LOC123457046
location: 2260746..2260942
location: region:2260746-2260942:1
so has part: feature:2260746-2260942:1:exon

position:2260942:1
position: 2260942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2260746-2260942:1:exon

LOC123457046
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457046
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC123457046
subclass of: SO_0000673
so part of: LOC123457046
location: 2265336..2266304
location: region:2265336-2266304:1
so has part: feature:2265336-2266304:1:exon

position:2265336:1
position: 2265336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2265336-2266304:1:exon

LOC123457132
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457132
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2320229..2320331
location: region:2320229-2320331:1
so has part: feature:2320229-2320331:1:exon
subclass of: SO_0000623

123457132
type: Gene
SIO_000068: ncbigene

position:2320229:1
position: 2320229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2320331:1
position: 2320331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2320229-2320331:1:exon

LOC123457132
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457132
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634906.1
SIO_010081: LOC123457132
subclass of: SO_0000673
so part of: LOC123457132
location: 2320229..2320331
location: region:2320229-2320331:1
so has part: feature:2320229-2320331:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2320229-2320331:1:exon

LOC123457047
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457047
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2414151..2417665
location: region:2414151-2417665:1
so has part: feature:2414151-2417665:1:exon
subclass of: SO_0000010

123457047
type: Gene
SIO_000068: ncbigene

position:2414151:1
position: 2414151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2417665:1
position: 2417665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2414151-2417665:1:exon

LOC123457047
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457047
product: heat shock transcription factor, X-linked member 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045141145.1
SIO_010081: LOC123457047
subclass of: SO_0000673
so part of: LOC123457047
location: join(2414151..2414642,2417117..2417665)
location: region:2414151-2417665:1
so has part: feature:2414151-2414642:1:exon
so has part: feature:2417117-2417665:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2414151-2414642:1:exon

position:2414642:1
position: 2414642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2417117-2417665:1:exon

position:2417117:1
position: 2417117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123457047
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457047
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock transcription factor, X-linked member 3-like
translation: MNIQSMKKNNKSFGKPVVGEEPARAATSEASCDPNGDTRGGSQTQSDQGMSQDPRLGENLETQEQDHHEASEEGTSSLLGLSFPRKLWAVVENEAFKSVGWSEEGDTVKIEGELFEAEVLHRSGADKIFEMDSLKRFICELNLHGFRKIRTKNSPVHPGKKKMMIYQNANFQRDNPRLLENIWRRGCQRSPVQEEPCCKRRKLDFPQRSPHLQKKKQEKTISLKETPNKQAPQGQGTFLPVGVTGCPLALCPPEEHSVPCGECSPEDGNMVSLAGDRMEGSGQVSIRPSWYPDWGSVISFYNKCSSILKAVLAAISLSELSDGEREQGSTSVSSAEEEQEGFRQNK
SIO_010081: LOC123457047
subclass of: SO_0000673
so part of: LOC123457047
location: join(2414151..2414642,2417117..2417665)
location: region:2414151-2417665:1
so has part: feature:2414151-2414642:1:exon
so has part: feature:2417117-2417665:1:exon

XP_044997080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2414151-2414642:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2417117-2417665:1:exon

LOC123457125
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457125
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2651758..2651867)
location: region:2651758-2651867:-1
so has part: feature:2651758-2651867:-1:exon
subclass of: SO_0000623

123457125
type: Gene
SIO_000068: ncbigene

position:2651758:-1
position: 2651758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2651867:-1
position: 2651867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2651758-2651867:-1:exon

LOC123457125
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457125
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634899.1
SIO_010081: LOC123457125
subclass of: SO_0000673
so part of: LOC123457125
location: complement(2651758..2651867)
location: region:2651758-2651867:-1
so has part: feature:2651758-2651867:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2651758-2651867:-1:exon

LOC123457131
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457131
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2837363..2837467)
location: region:2837363-2837467:-1
so has part: feature:2837363-2837467:-1:exon
subclass of: SO_0000623

123457131
type: Gene
SIO_000068: ncbigene

position:2837363:-1
position: 2837363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2837467:-1
position: 2837467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2837363-2837467:-1:exon

LOC123457131
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457131
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634905.1
SIO_010081: LOC123457131
subclass of: SO_0000673
so part of: LOC123457131
location: complement(2837363..2837467)
location: region:2837363-2837467:-1
so has part: feature:2837363-2837467:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2837363-2837467:-1:exon

LOC123457113
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457113
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(2971807..2971906)
location: region:2971807-2971906:-1
so has part: feature:2971807-2971906:-1:exon

123457113
type: Gene
SIO_000068: ncbigene

position:2971807:-1
position: 2971807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2971906:-1
position: 2971906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2971807-2971906:-1:exon

LOC123457113
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457113
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123457113
subclass of: SO_0000673
so part of: LOC123457113
location: complement(2971807..2971906)
location: region:2971807-2971906:-1
so has part: feature:2971807-2971906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2971807-2971906:-1:exon

LOC123457048
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457048
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3004671..3006824)
location: region:3004671-3006824:-1
so has part: feature:3004671-3006824:-1:exon
subclass of: SO_0000010

123457048
type: Gene
SIO_000068: ncbigene

position:3004671:-1
position: 3004671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3006824:-1
position: 3006824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3004671-3006824:-1:exon

LOC123457048
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457048
product: heat shock transcription factor, X-linked member 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_045141146.1
SIO_010081: LOC123457048
subclass of: SO_0000673
so part of: LOC123457048
location: complement(join(3004671..3005256,3006331..3006824))
location: region:3004671-3006824:-1
so has part: feature:3006331-3006824:-1:exon
so has part: feature:3004671-3005256:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3006331-3006824:-1:exon

position:3006331:-1
position: 3006331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3004671-3005256:-1:exon

position:3005256:-1
position: 3005256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123457048
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457048
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock transcription factor, X-linked member 3-like
translation: MNTQSIKKNDKSIGKPVVGEEPARAAPSEASCDRNGDTRGGSEAQSDQGRSQYPNLRENLQTEPDHHAASEEGTSSLLGLSFPRKLWAVVENEAFKSVGWSEEGDTMKIEGDLFEAEVLHRSGADKIFEMDSLKRFICELNLHGFRKIRTKNSPVHPGKKKMMVESIKMQTFRGITQGCSRTSGGEDVNAALLRKSHAAREGSSSAPNALHTFRRRSQKTISLKEAPNKQAPQGQGTFLPAGVTGCPLALCPPEEHSVPCGECSPEDGNMVSLAGDRMEGSGQVSIRPSWYPDWGSVMSFYNKCSSMLKAALAAISLSDLSVGEREQGSTSESSAEEEQEGFRQNKCVICVLYKDSSRS
SIO_010081: LOC123457048
subclass of: SO_0000673
so part of: LOC123457048
location: complement(join(3004671..3005256,3006331..3006824))
location: region:3004671-3006824:-1
so has part: feature:3006331-3006824:-1:exon
so has part: feature:3004671-3005256:-1:exon

XP_044997081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3006331-3006824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3004671-3005256:-1:exon

LOC123457049
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457049
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3026246..3093063
location: region:3026246-3093063:1
so has part: feature:3026246-3093063:1:exon

123457049
type: Gene
SIO_000068: ncbigene

position:3026246:1
position: 3026246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3093063:1
position: 3093063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3026246-3093063:1:exon

LOC123457049
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457049
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 5% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457049
subclass of: SO_0000673
so part of: LOC123457049
location: 3026246..3026278
location: region:3026246-3026278:1
so has part: feature:3026246-3026278:1:exon

position:3026278:1
position: 3026278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3026246-3026278:1:exon

LOC123457049
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457049
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 5% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457049
subclass of: SO_0000673
so part of: LOC123457049
location: 3026313..3026783
location: region:3026313-3026783:1
so has part: feature:3026313-3026783:1:exon

position:3026313:1
position: 3026313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3026783:1
position: 3026783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3026313-3026783:1:exon

LOC123457118
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457118
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3053854..3053963)
location: region:3053854-3053963:-1
so has part: feature:3053854-3053963:-1:exon
subclass of: SO_0000623

123457118
type: Gene
SIO_000068: ncbigene

position:3053854:-1
position: 3053854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3053963:-1
position: 3053963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3053854-3053963:-1:exon

LOC123457118
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457118
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634893.1
SIO_010081: LOC123457118
subclass of: SO_0000673
so part of: LOC123457118
location: complement(3053854..3053963)
location: region:3053854-3053963:-1
so has part: feature:3053854-3053963:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3053854-3053963:-1:exon

LOC123457049
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457049
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 5% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457049
subclass of: SO_0000673
so part of: LOC123457049
location: 3065908..3065962
location: region:3065908-3065962:1
so has part: feature:3065908-3065962:1:exon

position:3065908:1
position: 3065908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3065962:1
position: 3065962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3065908-3065962:1:exon

LOC123457049
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457049
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 5% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457049
subclass of: SO_0000673
so part of: LOC123457049
location: 3088283..3088352
location: region:3088283-3088352:1
so has part: feature:3088283-3088352:1:exon

position:3088283:1
position: 3088283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3088352:1
position: 3088352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3088283-3088352:1:exon

LOC123457049
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457049
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 5% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457049
subclass of: SO_0000673
so part of: LOC123457049
location: 3088457..3088621
location: region:3088457-3088621:1
so has part: feature:3088457-3088621:1:exon

position:3088457:1
position: 3088457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3088621:1
position: 3088621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3088457-3088621:1:exon

LOC123457049
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457049
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 5% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457049
subclass of: SO_0000673
so part of: LOC123457049
location: 3092899..3093063
location: region:3092899-3093063:1
so has part: feature:3092899-3093063:1:exon

position:3092899:1
position: 3092899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3092899-3093063:1:exon

LOC123457088
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3097948..3098465
location: region:3097948-3098465:1
so has part: feature:3097948-3098465:1:exon
subclass of: SO_0000010

123457088
type: Gene
SIO_000068: ncbigene

position:3097948:1
position: 3097948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3098465:1
position: 3098465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3097948-3098465:1:exon

LOC123457088
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457088
product: 60S ribosomal protein L23a-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045141173.1
SIO_010081: LOC123457088
subclass of: SO_0000673
so part of: LOC123457088
location: 3097948..3098465
location: region:3097948-3098465:1
so has part: feature:3097948-3098465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3097948-3098465:1:exon

LOC123457088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L23a-like
translation: MAPKAKKEAPAPPKAEAKAKALKAKKAALKGVHSHKKKKNCTSPTFQRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLNSESAMKKIEDNTTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIGPDGEKKAYVRLAPDYDALDVANKIRII
SIO_010081: LOC123457088
subclass of: SO_0000673
so part of: LOC123457088
location: 3097948..3098418
location: region:3097948-3098418:1
so has part: feature:3097948-3098418:1:exon

XP_044997108.1
type: Protein
SIO_000068: ncbiprotein

position:3098418:1
position: 3098418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3097948-3098418:1:exon

LOC123457130
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457130
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3110687..3110791
location: region:3110687-3110791:1
so has part: feature:3110687-3110791:1:exon
subclass of: SO_0000623

123457130
type: Gene
SIO_000068: ncbigene

position:3110687:1
position: 3110687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3110791:1
position: 3110791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3110687-3110791:1:exon

LOC123457130
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457130
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634904.1
SIO_010081: LOC123457130
subclass of: SO_0000673
so part of: LOC123457130
location: 3110687..3110791
location: region:3110687-3110791:1
so has part: feature:3110687-3110791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3110687-3110791:1:exon

LOC123457129
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457129
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3211128..3211236)
location: region:3211128-3211236:-1
so has part: feature:3211128-3211236:-1:exon
subclass of: SO_0000623

123457129
type: Gene
SIO_000068: ncbigene

position:3211128:-1
position: 3211128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3211236:-1
position: 3211236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3211128-3211236:-1:exon

LOC123457129
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457129
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634903.1
SIO_010081: LOC123457129
subclass of: SO_0000673
so part of: LOC123457129
location: complement(3211128..3211236)
location: region:3211128-3211236:-1
so has part: feature:3211128-3211236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3211128-3211236:-1:exon

LOC123457128
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457128
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3248620..3248724
location: region:3248620-3248724:1
so has part: feature:3248620-3248724:1:exon
subclass of: SO_0000623

123457128
type: Gene
SIO_000068: ncbigene

position:3248620:1
position: 3248620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3248724:1
position: 3248724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3248620-3248724:1:exon

LOC123457128
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457128
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634902.1
SIO_010081: LOC123457128
subclass of: SO_0000673
so part of: LOC123457128
location: 3248620..3248724
location: region:3248620-3248724:1
so has part: feature:3248620-3248724:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3248620-3248724:1:exon

LOC123457108
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457108
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3268509..3268618)
location: region:3268509-3268618:-1
so has part: feature:3268509-3268618:-1:exon
subclass of: SO_0000623

123457108
type: Gene
SIO_000068: ncbigene

position:3268509:-1
position: 3268509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3268618:-1
position: 3268618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3268509-3268618:-1:exon

LOC123457108
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457108
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634886.1
SIO_010081: LOC123457108
subclass of: SO_0000673
so part of: LOC123457108
location: complement(3268509..3268618)
location: region:3268509-3268618:-1
so has part: feature:3268509-3268618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3268509-3268618:-1:exon

LOC123457114
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457114
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3304507..3304610
location: region:3304507-3304610:1
so has part: feature:3304507-3304610:1:exon
subclass of: SO_0000623

123457114
type: Gene
SIO_000068: ncbigene

position:3304507:1
position: 3304507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3304610:1
position: 3304610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3304507-3304610:1:exon

LOC123457114
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457114
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634891.1
SIO_010081: LOC123457114
subclass of: SO_0000673
so part of: LOC123457114
location: 3304507..3304610
location: region:3304507-3304610:1
so has part: feature:3304507-3304610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3304507-3304610:1:exon

LOC123457122
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457122
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3340604..3340708
location: region:3340604-3340708:1
so has part: feature:3340604-3340708:1:exon
subclass of: SO_0000623

123457122
type: Gene
SIO_000068: ncbigene

position:3340604:1
position: 3340604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3340708:1
position: 3340708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3340604-3340708:1:exon

LOC123457122
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457122
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634896.1
SIO_010081: LOC123457122
subclass of: SO_0000673
so part of: LOC123457122
location: 3340604..3340708
location: region:3340604-3340708:1
so has part: feature:3340604-3340708:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3340604-3340708:1:exon

LOC123457050
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457050
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3451328..3457650)
location: region:3451328-3457650:-1
so has part: feature:3451328-3457650:-1:exon
subclass of: SO_0000010

123457050
type: Gene
SIO_000068: ncbigene

position:3451328:-1
position: 3451328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3457650:-1
position: 3457650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3451328-3457650:-1:exon

LOC123457050
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457050
product: probasin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_045141148.1
SIO_010081: LOC123457050
subclass of: SO_0000673
so part of: LOC123457050
location: complement(join(3451328..3451368,3452143..3452244,3453827..3453937,3455270..3455396,3456857..3456869,3457445..3457650))
location: region:3451328-3457650:-1
so has part: feature:3457445-3457650:-1:exon
so has part: feature:3456857-3456869:-1:exon
so has part: feature:3455270-3455396:-1:exon
so has part: feature:3453827-3453937:-1:exon
so has part: feature:3452143-3452244:-1:exon
so has part: feature:3451328-3451368:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3457445-3457650:-1:exon

position:3457445:-1
position: 3457445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3456857-3456869:-1:exon

position:3456857:-1
position: 3456857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3456869:-1
position: 3456869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3455270-3455396:-1:exon

position:3455270:-1
position: 3455270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3455396:-1
position: 3455396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3453827-3453937:-1:exon

position:3453827:-1
position: 3453827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3453937:-1
position: 3453937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3452143-3452244:-1:exon

position:3452143:-1
position: 3452143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3452244:-1
position: 3452244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3451328-3451368:-1:exon

position:3451368:-1
position: 3451368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123457050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457050
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probasin-like
translation: MSDHNGSGEGIYKFSKCAFSSEDSTGFHTIYIAADKLATVEENGPMRISARQIVFSHNSDKVTFMFYIRKSLHGICQPSNTSQCGEYRIAQKSGLNLAFLGLSDVQIKTLKPGVRVPGLVKFSLKFVSKNTILSEATHEDEKGTITYLTIALAKGTSLSKEMYDKYLKMTNTRLIPKENIQELIKSDGSNLEMIVTASS
SIO_010081: LOC123457050
subclass of: SO_0000673
so part of: LOC123457050
location: complement(join(3451328..3451368,3452143..3452244,3453827..3453937,3455270..3455396,3456857..3456869,3457445..3457650))
location: region:3451328-3457650:-1
so has part: feature:3457445-3457650:-1:exon
so has part: feature:3456857-3456869:-1:exon
so has part: feature:3455270-3455396:-1:exon
so has part: feature:3453827-3453937:-1:exon
so has part: feature:3452143-3452244:-1:exon
so has part: feature:3451328-3451368:-1:exon

XP_044997083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3457445-3457650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3456857-3456869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3455270-3455396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3453827-3453937:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3452143-3452244:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3451328-3451368:-1:exon

LOC123457119
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457119
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3482657..3482760)
location: region:3482657-3482760:-1
so has part: feature:3482657-3482760:-1:exon
subclass of: SO_0000623

123457119
type: Gene
SIO_000068: ncbigene

position:3482657:-1
position: 3482657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3482760:-1
position: 3482760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3482657-3482760:-1:exon

LOC123457119
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457119
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634894.1
SIO_010081: LOC123457119
subclass of: SO_0000673
so part of: LOC123457119
location: complement(3482657..3482760)
location: region:3482657-3482760:-1
so has part: feature:3482657-3482760:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3482657-3482760:-1:exon

LOC123457103
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457103
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3518636..3518745
location: region:3518636-3518745:1
so has part: feature:3518636-3518745:1:exon
subclass of: SO_0000623

123457103
type: Gene
SIO_000068: ncbigene

position:3518636:1
position: 3518636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3518745:1
position: 3518745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3518636-3518745:1:exon

LOC123457103
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457103
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634882.1
SIO_010081: LOC123457103
subclass of: SO_0000673
so part of: LOC123457103
location: 3518636..3518745
location: region:3518636-3518745:1
so has part: feature:3518636-3518745:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3518636-3518745:1:exon

LOC123457110
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457110
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3691233..3691342)
location: region:3691233-3691342:-1
so has part: feature:3691233-3691342:-1:exon
subclass of: SO_0000623

123457110
type: Gene
SIO_000068: ncbigene

position:3691233:-1
position: 3691233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3691342:-1
position: 3691342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3691233-3691342:-1:exon

LOC123457110
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457110
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634888.1
SIO_010081: LOC123457110
subclass of: SO_0000673
so part of: LOC123457110
location: complement(3691233..3691342)
location: region:3691233-3691342:-1
so has part: feature:3691233-3691342:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3691233-3691342:-1:exon

LOC123457116
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457116
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4061914..4062018
location: region:4061914-4062018:1
so has part: feature:4061914-4062018:1:exon
subclass of: SO_0000623

123457116
type: Gene
SIO_000068: ncbigene

position:4061914:1
position: 4061914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4062018:1
position: 4062018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4061914-4062018:1:exon

LOC123457116
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457116
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634892.1
SIO_010081: LOC123457116
subclass of: SO_0000673
so part of: LOC123457116
location: 4061914..4062018
location: region:4061914-4062018:1
so has part: feature:4061914-4062018:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4061914-4062018:1:exon

LOC123457111
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457111
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4116661..4116770)
location: region:4116661-4116770:-1
so has part: feature:4116661-4116770:-1:exon
subclass of: SO_0000623

123457111
type: Gene
SIO_000068: ncbigene

position:4116661:-1
position: 4116661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4116770:-1
position: 4116770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4116661-4116770:-1:exon

LOC123457111
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457111
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634889.1
SIO_010081: LOC123457111
subclass of: SO_0000673
so part of: LOC123457111
location: complement(4116661..4116770)
location: region:4116661-4116770:-1
so has part: feature:4116661-4116770:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4116661-4116770:-1:exon

LOC123457097
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457097
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 4131463..4131585
location: region:4131463-4131585:1
so has part: feature:4131463-4131585:1:exon

123457097
type: Gene
SIO_000068: ncbigene

position:4131463:1
position: 4131463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4131585:1
position: 4131585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4131463-4131585:1:exon

LOC123457097
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457097
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123457097
subclass of: SO_0000673
so part of: LOC123457097
location: 4131463..4131585
location: region:4131463-4131585:1
so has part: feature:4131463-4131585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4131463-4131585:1:exon

LOC123457115
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457115
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 4304069..4304182
location: region:4304069-4304182:1
so has part: feature:4304069-4304182:1:exon

123457115
type: Gene
SIO_000068: ncbigene

position:4304069:1
position: 4304069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4304182:1
position: 4304182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4304069-4304182:1:exon

LOC123457115
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457115
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123457115
subclass of: SO_0000673
so part of: LOC123457115
location: 4304069..4304182
location: region:4304069-4304182:1
so has part: feature:4304069-4304182:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4304069-4304182:1:exon

LOC123457051
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457051
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4356841..4364485
location: region:4356841-4364485:1
so has part: feature:4356841-4364485:1:exon
subclass of: SO_0000010

123457051
type: Gene
SIO_000068: ncbigene

position:4356841:1
position: 4356841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4364485:1
position: 4364485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4356841-4364485:1:exon

LOC123457051
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457051
product: nuclear ubiquitous casein and cyclin-dependent kinase substrate 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045141149.1
SIO_010081: LOC123457051
subclass of: SO_0000673
so part of: LOC123457051
location: join(4356841..4356947,4357084..4357154,4357303..4357465,4363900..4364485)
location: region:4356841-4364485:1
so has part: feature:4356841-4356947:1:exon
so has part: feature:4357084-4357154:1:exon
so has part: feature:4357303-4357465:1:exon
so has part: feature:4363900-4364485:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4356841-4356947:1:exon

position:4356947:1
position: 4356947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4357084-4357154:1:exon

position:4357084:1
position: 4357084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4357154:1
position: 4357154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4357303-4357465:1:exon

position:4357303:1
position: 4357303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4357465:1
position: 4357465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4363900-4364485:1:exon

position:4363900:1
position: 4363900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123457051
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457051
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear ubiquitous casein and cyclin-dependent kinase substrate 1-like
translation: MVVECRNVKENGKELQTPGGTGSHIEVWDNCQRKLMENGACRLYRLQAAKYKPLTFTDIWNRLRGIKPVEKKINNPKGLWVIDNSYDSYPRVWIRQFYNKDVGGYNYHDYLQLTSFGKNSQEDSEDSEEKDVKTKKDDSHSAEDREDEKDDHKNMRQQLQAASKAASKQREMLLEDVGSEEELEEEDEAPFQEKDSGSDEDFLMEDDDDSDYGISKQKNKKVVKKSKPDRKEKKMPKPRLKATVTPSPVKGKGKVGRPTASKVSKEKMPYPKEEEEPESPPEKKASASPPPEKSGDEGAEDEAQSGED
SIO_010081: LOC123457051
subclass of: SO_0000673
so part of: LOC123457051
location: join(4356841..4356947,4357084..4357154,4357303..4357465,4363900..4364485)
location: region:4356841-4364485:1
so has part: feature:4356841-4356947:1:exon
so has part: feature:4357084-4357154:1:exon
so has part: feature:4357303-4357465:1:exon
so has part: feature:4363900-4364485:1:exon

XP_044997084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4356841-4356947:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4357084-4357154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4357303-4357465:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4363900-4364485:1:exon

LOC123457089
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4463845..4480094)
location: region:4463845-4480094:-1
so has part: feature:4463845-4480094:-1:exon
subclass of: SO_0000010

123457089
type: Gene
SIO_000068: ncbigene

position:4463845:-1
position: 4463845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4480094:-1
position: 4480094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4463845-4480094:-1:exon

LOC123457089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457089
product: gametocyte-specific factor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045141174.1
SIO_010081: LOC123457089
subclass of: SO_0000673
so part of: LOC123457089
location: complement(join(4463845..4463977,4465929..4465962,4467044..4467126,4470675..4470741,4471188..4471271,4472096..4472219,4473597..4473697,4477414..4477457,4480012..4480094))
location: region:4463845-4480094:-1
so has part: feature:4480012-4480094:-1:exon
so has part: feature:4477414-4477457:-1:exon
so has part: feature:4473597-4473697:-1:exon
so has part: feature:4472096-4472219:-1:exon
so has part: feature:4471188-4471271:-1:exon
so has part: feature:4470675-4470741:-1:exon
so has part: feature:4467044-4467126:-1:exon
so has part: feature:4465929-4465962:-1:exon
so has part: feature:4463845-4463977:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4480012-4480094:-1:exon

position:4480012:-1
position: 4480012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4477414-4477457:-1:exon

position:4477414:-1
position: 4477414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4477457:-1
position: 4477457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4473597-4473697:-1:exon

position:4473597:-1
position: 4473597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4473697:-1
position: 4473697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4472096-4472219:-1:exon

position:4472096:-1
position: 4472096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4472219:-1
position: 4472219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4471188-4471271:-1:exon

position:4471188:-1
position: 4471188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4471271:-1
position: 4471271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4470675-4470741:-1:exon

position:4470675:-1
position: 4470675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4470741:-1
position: 4470741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4467044-4467126:-1:exon

position:4467044:-1
position: 4467044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4467126:-1
position: 4467126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4465929-4465962:-1:exon

position:4465929:-1
position: 4465929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4465962:-1
position: 4465962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4463845-4463977:-1:exon

position:4463977:-1
position: 4463977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123457089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1-like
translation: MESPDPERLLQCPYVKNHHIRACRFPYHLIKCKKNHPDIARNFATCPFNARHLVPRTELSHHISICDDRCIEQDLVNPIRNPRQDTVPKNTWQYPPCDEDWDLELAEENNTTPFIWGTTRFCENKCPANNAAMEPKSNLASGKQVPKTLPWKNSGYGQ
SIO_010081: LOC123457089
subclass of: SO_0000673
so part of: LOC123457089
location: complement(join(4465946..4465962,4467044..4467126,4470675..4470741,4471188..4471271,4472096..4472219,4473597..4473697,4477414))
location: region:4465946-4477414:-1
so has part: feature:4477414-4477414:-1:exon
so has part: feature:4473597-4473697:-1:exon
so has part: feature:4472096-4472219:-1:exon
so has part: feature:4471188-4471271:-1:exon
so has part: feature:4470675-4470741:-1:exon
so has part: feature:4467044-4467126:-1:exon
so has part: feature:4465946-4465962:-1:exon

XP_044997109.1
type: Protein
SIO_000068: ncbiprotein

position:4465946:-1
position: 4465946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4477414-4477414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4473597-4473697:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4472096-4472219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4471188-4471271:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4470675-4470741:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4467044-4467126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4465946-4465962:-1:exon

LOC123457052
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457052
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4487997..4492289)
location: region:4487997-4492289:-1
so has part: feature:4487997-4492289:-1:exon

123457052
type: Gene
SIO_000068: ncbigene

position:4487997:-1
position: 4487997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4492289:-1
position: 4492289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4487997-4492289:-1:exon

LOC123457052
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457052
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC123457052
subclass of: SO_0000673
so part of: LOC123457052
location: complement(4487997..4488452)
location: region:4487997-4488452:-1
so has part: feature:4487997-4488452:-1:exon

position:4488452:-1
position: 4488452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4487997-4488452:-1:exon

LOC123457052
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457052
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC123457052
subclass of: SO_0000673
so part of: LOC123457052
location: complement(4492248..4492289)
location: region:4492248-4492289:-1
so has part: feature:4492248-4492289:-1:exon

position:4492248:-1
position: 4492248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4492248-4492289:-1:exon

LOC123457138
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457138
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4864878..4865005)
location: region:4864878-4865005:-1
so has part: feature:4864878-4865005:-1:exon
subclass of: SO_0000578

123457138
type: Gene
SIO_000068: ncbigene

position:4864878:-1
position: 4864878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4865005:-1
position: 4865005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4864878-4865005:-1:exon

LOC123457138
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snoRNA
gene: LOC123457138
product: small nucleolar RNA SNORA33
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00438
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634912.1
SIO_010081: LOC123457138
subclass of: SO_0000673
so part of: LOC123457138
location: complement(4864878..4865005)
location: region:4864878-4865005:-1
so has part: feature:4864878-4865005:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4864878-4865005:-1:exon

LOC123457079
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4948088..4959703
location: region:4948088-4959703:1
so has part: feature:4948088-4959703:1:exon
subclass of: SO_0000010

123457079
type: Gene
SIO_000068: ncbigene

position:4948088:1
position: 4948088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4959703:1
position: 4959703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4948088-4959703:1:exon

LOC123457079
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457079
product: deleted in azoospermia-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_045141162.1
SIO_010081: LOC123457079
subclass of: SO_0000673
so part of: LOC123457079
location: join(4948088..4948177,4948987..4949078,4949857..4949908,4950696..4950759,4950848..4950987,4953386..4953457,4954001..4954051,4955123..4955236,4956213..4956294,4959678..4959703)
location: region:4948088-4959703:1
so has part: feature:4948088-4948177:1:exon
so has part: feature:4948987-4949078:1:exon
so has part: feature:4949857-4949908:1:exon
so has part: feature:4950696-4950759:1:exon
so has part: feature:4950848-4950987:1:exon
so has part: feature:4953386-4953457:1:exon
so has part: feature:4954001-4954051:1:exon
so has part: feature:4955123-4955236:1:exon
so has part: feature:4956213-4956294:1:exon
so has part: feature:4959678-4959703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4948088-4948177:1:exon

position:4948177:1
position: 4948177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4948987-4949078:1:exon

position:4948987:1
position: 4948987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4949078:1
position: 4949078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4949857-4949908:1:exon

position:4949857:1
position: 4949857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4949908:1
position: 4949908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4950696-4950759:1:exon

position:4950696:1
position: 4950696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4950759:1
position: 4950759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4950848-4950987:1:exon

position:4950848:1
position: 4950848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4950987:1
position: 4950987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4953386-4953457:1:exon

position:4953386:1
position: 4953386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4953457:1
position: 4953457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4954001-4954051:1:exon

position:4954001:1
position: 4954001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4954051:1
position: 4954051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4955123-4955236:1:exon

position:4955123:1
position: 4955123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4955236:1
position: 4955236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4956213-4956294:1:exon

position:4956213:1
position: 4956213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4956294:1
position: 4956294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4959678-4959703:1:exon

position:4959678:1
position: 4959678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123457079
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457079
product: deleted in azoospermia-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_045141164.1
SIO_010081: LOC123457079
subclass of: SO_0000673
so part of: LOC123457079
location: join(4948088..4948177,4948987..4949078,4949857..4949908,4950696..4950759,4950848..4950987,4953386..4953457,4955123..4955236,4956213..4956294,4959678..4959703)
location: region:4948088-4959703:1
so has part: feature:4948088-4948177:1:exon
so has part: feature:4948987-4949078:1:exon
so has part: feature:4949857-4949908:1:exon
so has part: feature:4950696-4950759:1:exon
so has part: feature:4950848-4950987:1:exon
so has part: feature:4953386-4953457:1:exon
so has part: feature:4955123-4955236:1:exon
so has part: feature:4956213-4956294:1:exon
so has part: feature:4959678-4959703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4948088-4948177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4948987-4949078:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4949857-4949908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4950696-4950759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4950848-4950987:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4953386-4953457:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4955123-4955236:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4956213-4956294:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4959678-4959703:1:exon

LOC123457079
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deleted in azoospermia-like isoform X1
translation: MSSASTSQGYVLPEGRVIPNTVFVGGIDLRMEENEIRGVFARFGSVKEVKIISDRYGLSKGYGFVSFYNDVDVQKIVESQITFHGKKLNLGPAIRKQNISAHHVQPCPLIFNPPLPPFQSVGSSPNTENYMQPPAMLSHPITQYVQTHPPYQCSPVQVATGYQLPVYNCQLAPQWTTREERSYVIPPTSAAVNYHSNEVGPGVEVLPYDCLGHKATPNSGNGPQKKFVNRSVQTLESCLFNPENRVRNSLLRNDCFFQDK
SIO_010081: LOC123457079
subclass of: SO_0000673
so part of: LOC123457079
location: join(4948088..4948177,4948987..4949078,4949857..4949908,4950696..4950759,4950848..4950987,4953386..4953457,4954001..4954051,4955123..4955236,4956213..4956294,4959678..4959703)
location: region:4948088-4959703:1
so has part: feature:4948088-4948177:1:exon
so has part: feature:4948987-4949078:1:exon
so has part: feature:4949857-4949908:1:exon
so has part: feature:4950696-4950759:1:exon
so has part: feature:4950848-4950987:1:exon
so has part: feature:4953386-4953457:1:exon
so has part: feature:4954001-4954051:1:exon
so has part: feature:4955123-4955236:1:exon
so has part: feature:4956213-4956294:1:exon
so has part: feature:4959678-4959703:1:exon

XP_044997097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4948088-4948177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4948987-4949078:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4949857-4949908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4950696-4950759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4950848-4950987:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4953386-4953457:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4954001-4954051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4955123-4955236:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4956213-4956294:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4959678-4959703:1:exon

LOC123457079
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deleted in azoospermia-like isoform X3
translation: MSSASTSQGYVLPEGRVIPNTVFVGGIDLRMEENEIRGVFARFGSVKEVKIISDRYGLSKGYGFVSFYNDVDVQKIVESQITFHGKKLNLGPAIRKQNISAHHVQPCPLIFNPPLPPFQSVGSSPNTENYMQPPAMLSHPITQYVQTHPPYQCSPVQVATGYQLPVYNCQTSAAVNYHSNEVGPGVEVLPYDCLGHKATPNSGNGPQKKFVNRSVQTLESCLFNPENRVRNSLLRNDCFFQDK
SIO_010081: LOC123457079
subclass of: SO_0000673
so part of: LOC123457079
location: join(4948088..4948177,4948987..4949078,4949857..4949908,4950696..4950759,4950848..4950987,4953386..4953457,4955123..4955236,4956213..4956294,4959678..4959703)
location: region:4948088-4959703:1
so has part: feature:4948088-4948177:1:exon
so has part: feature:4948987-4949078:1:exon
so has part: feature:4949857-4949908:1:exon
so has part: feature:4950696-4950759:1:exon
so has part: feature:4950848-4950987:1:exon
so has part: feature:4953386-4953457:1:exon
so has part: feature:4955123-4955236:1:exon
so has part: feature:4956213-4956294:1:exon
so has part: feature:4959678-4959703:1:exon

XP_044997099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4948088-4948177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4948987-4949078:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4949857-4949908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4950696-4950759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4950848-4950987:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4953386-4953457:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4955123-4955236:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4956213-4956294:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4959678-4959703:1:exon

LOC123457079
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457079
product: deleted in azoospermia-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_045141163.1
SIO_010081: LOC123457079
subclass of: SO_0000673
so part of: LOC123457079
location: join(4948088..4948177,4948987..4949078,4949857..4949908,4950696..4950759,4950848..4950987,4953386..4953457,4954001..4954051,4955123..4955236,4956213..4956280,4959664..4959676)
location: region:4948088-4959676:1
so has part: feature:4948088-4948177:1:exon
so has part: feature:4948987-4949078:1:exon
so has part: feature:4949857-4949908:1:exon
so has part: feature:4950696-4950759:1:exon
so has part: feature:4950848-4950987:1:exon
so has part: feature:4953386-4953457:1:exon
so has part: feature:4954001-4954051:1:exon
so has part: feature:4955123-4955236:1:exon
so has part: feature:4956213-4956280:1:exon
so has part: feature:4959664-4959676:1:exon

position:4959676:1
position: 4959676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4948088-4948177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4948987-4949078:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4949857-4949908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4950696-4950759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4950848-4950987:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4953386-4953457:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4954001-4954051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4955123-4955236:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4956213-4956280:1:exon

position:4956280:1
position: 4956280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4959664-4959676:1:exon

position:4959664:1
position: 4959664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123457079
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deleted in azoospermia-like isoform X2
translation: MSSASTSQGYVLPEGRVIPNTVFVGGIDLRMEENEIRGVFARFGSVKEVKIISDRYGLSKGYGFVSFYNDVDVQKIVESQITFHGKKLNLGPAIRKQNISAHHVQPCPLIFNPPLPPFQSVGSSPNTENYMQPPAMLSHPITQYVQTHPPYQCSPVQVATGYQLPVYNCQLAPQWTTREERSYVIPPTSAAVNYHSNEVGPGVEVLPYDCLGHKATPNSGNGPQKKFVNRSVQTLESCLFNPENRVRNSVI
SIO_010081: LOC123457079
subclass of: SO_0000673
so part of: LOC123457079
location: join(4948088..4948177,4948987..4949078,4949857..4949908,4950696..4950759,4950848..4950987,4953386..4953457,4954001..4954051,4955123..4955236,4956213..4956280,4959664..4959676)
location: region:4948088-4959676:1
so has part: feature:4948088-4948177:1:exon
so has part: feature:4948987-4949078:1:exon
so has part: feature:4949857-4949908:1:exon
so has part: feature:4950696-4950759:1:exon
so has part: feature:4950848-4950987:1:exon
so has part: feature:4953386-4953457:1:exon
so has part: feature:4954001-4954051:1:exon
so has part: feature:4955123-4955236:1:exon
so has part: feature:4956213-4956280:1:exon
so has part: feature:4959664-4959676:1:exon

XP_044997098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4948088-4948177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4948987-4949078:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4949857-4949908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4950696-4950759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4950848-4950987:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4953386-4953457:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4954001-4954051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4955123-4955236:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4956213-4956280:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4959664-4959676:1:exon

LOC123457093
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457093
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5281164..5281354
location: region:5281164-5281354:1
so has part: feature:5281164-5281354:1:exon
subclass of: SO_0000623

123457093
type: Gene
SIO_000068: ncbigene

position:5281164:1
position: 5281164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5281354:1
position: 5281354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5281164-5281354:1:exon

LOC123457093
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457093
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634873.1
SIO_010081: LOC123457093
subclass of: SO_0000673
so part of: LOC123457093
location: 5281164..5281354
location: region:5281164-5281354:1
so has part: feature:5281164-5281354:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5281164-5281354:1:exon

LOC123457136
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457136
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5297442..5297507
location: region:5297442-5297507:1
so has part: feature:5297442-5297507:1:exon
subclass of: SO_0000578

123457136
type: Gene
SIO_000068: ncbigene

position:5297442:1
position: 5297442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5297507:1
position: 5297507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5297442-5297507:1:exon

LOC123457136
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snoRNA
gene: LOC123457136
product: small nucleolar RNA SNORD43
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00221
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634910.1
SIO_010081: LOC123457136
subclass of: SO_0000673
so part of: LOC123457136
location: 5297442..5297507
location: region:5297442-5297507:1
so has part: feature:5297442-5297507:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5297442-5297507:1:exon

LOC123457137
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457137
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5320784..5320910
location: region:5320784-5320910:1
so has part: feature:5320784-5320910:1:exon
subclass of: SO_0000578

123457137
type: Gene
SIO_000068: ncbigene

position:5320784:1
position: 5320784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5320910:1
position: 5320910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5320784-5320910:1:exon

LOC123457137
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snoRNA
gene: LOC123457137
product: small nucleolar RNA SNORA33
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00438
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634911.1
SIO_010081: LOC123457137
subclass of: SO_0000673
so part of: LOC123457137
location: 5320784..5320910
location: region:5320784-5320910:1
so has part: feature:5320784-5320910:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5320784-5320910:1:exon

LOC123457080
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457080
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5684332..5706476)
location: region:5684332-5706476:-1
so has part: feature:5684332-5706476:-1:exon
subclass of: SO_0000010

123457080
type: Gene
SIO_000068: ncbigene

position:5684332:-1
position: 5684332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5706476:-1
position: 5706476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5684332-5706476:-1:exon

LOC123457080
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457080
product: gametocyte-specific factor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_045141165.1
SIO_010081: LOC123457080
subclass of: SO_0000673
so part of: LOC123457080
location: complement(join(5684332..5684651,5687904..5687937,5689590..5689672,5693718..5693784,5694232..5694315,5694926..5695052,5698811..5698911,5703773..5703816,5706394..5706476))
location: region:5684332-5706476:-1
so has part: feature:5706394-5706476:-1:exon
so has part: feature:5703773-5703816:-1:exon
so has part: feature:5698811-5698911:-1:exon
so has part: feature:5694926-5695052:-1:exon
so has part: feature:5694232-5694315:-1:exon
so has part: feature:5693718-5693784:-1:exon
so has part: feature:5689590-5689672:-1:exon
so has part: feature:5687904-5687937:-1:exon
so has part: feature:5684332-5684651:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5706394-5706476:-1:exon

position:5706394:-1
position: 5706394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5703773-5703816:-1:exon

position:5703773:-1
position: 5703773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5703816:-1
position: 5703816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5698811-5698911:-1:exon

position:5698811:-1
position: 5698811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5698911:-1
position: 5698911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5694926-5695052:-1:exon

position:5694926:-1
position: 5694926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5695052:-1
position: 5695052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5694232-5694315:-1:exon

position:5694232:-1
position: 5694232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5694315:-1
position: 5694315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5693718-5693784:-1:exon

position:5693718:-1
position: 5693718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5693784:-1
position: 5693784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5689590-5689672:-1:exon

position:5689590:-1
position: 5689590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5689672:-1
position: 5689672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5687904-5687937:-1:exon

position:5687904:-1
position: 5687904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5687937:-1
position: 5687937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5684332-5684651:-1:exon

position:5684651:-1
position: 5684651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123457080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457080
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1-like
translation: MESPDPERLLQCPYDKKHRIRACRFPYHLIKCKKNHPDVAKQLATCPFNARHLVPRAELSHHISICDDRCCIEQDVVIPTRNPGEDTLPKSTLQHPPCDEDWDKELAEENNTTPFIWGTTSFCDNKCPASNTAMEHKSNLASGKQVPKTQPWKNSGYGQ
SIO_010081: LOC123457080
subclass of: SO_0000673
so part of: LOC123457080
location: complement(join(5687921..5687937,5689590..5689672,5693718..5693784,5694232..5694315,5694926..5695052,5698811..5698911,5703773))
location: region:5687921-5703773:-1
so has part: feature:5703773-5703773:-1:exon
so has part: feature:5698811-5698911:-1:exon
so has part: feature:5694926-5695052:-1:exon
so has part: feature:5694232-5694315:-1:exon
so has part: feature:5693718-5693784:-1:exon
so has part: feature:5689590-5689672:-1:exon
so has part: feature:5687921-5687937:-1:exon

XP_044997100.1
type: Protein
SIO_000068: ncbiprotein

position:5687921:-1
position: 5687921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5703773-5703773:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5698811-5698911:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5694926-5695052:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5694232-5694315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5693718-5693784:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5689590-5689672:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5687921-5687937:-1:exon

LOC123457081
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457081
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5818959..5832773
location: region:5818959-5832773:1
so has part: feature:5818959-5832773:1:exon
subclass of: SO_0000010

123457081
type: Gene
SIO_000068: ncbigene

position:5818959:1
position: 5818959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5832773:1
position: 5832773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5818959-5832773:1:exon

LOC123457081
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457081
product: gametocyte-specific factor 1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045141167.1
SIO_010081: LOC123457081
subclass of: SO_0000673
so part of: LOC123457081
location: join(5818959..5819039,5821182..5821225,5823366..5823466,5825590..5825716,5826338..5826421,5826880..5826946,5829549..5829630,5830702..5830735,5832662..5832773)
location: region:5818959-5832773:1
so has part: feature:5818959-5819039:1:exon
so has part: feature:5821182-5821225:1:exon
so has part: feature:5823366-5823466:1:exon
so has part: feature:5825590-5825716:1:exon
so has part: feature:5826338-5826421:1:exon
so has part: feature:5826880-5826946:1:exon
so has part: feature:5829549-5829630:1:exon
so has part: feature:5830702-5830735:1:exon
so has part: feature:5832662-5832773:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5818959-5819039:1:exon

position:5819039:1
position: 5819039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5821182-5821225:1:exon

position:5821182:1
position: 5821182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5821225:1
position: 5821225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5823366-5823466:1:exon

position:5823366:1
position: 5823366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5823466:1
position: 5823466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5825590-5825716:1:exon

position:5825590:1
position: 5825590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5825716:1
position: 5825716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5826338-5826421:1:exon

position:5826338:1
position: 5826338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5826421:1
position: 5826421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5826880-5826946:1:exon

position:5826880:1
position: 5826880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5826946:1
position: 5826946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5829549-5829630:1:exon

position:5829549:1
position: 5829549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5829630:1
position: 5829630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5830702-5830735:1:exon

position:5830702:1
position: 5830702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5830735:1
position: 5830735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5832662-5832773:1:exon

position:5832662:1
position: 5832662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123457081
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457081
product: gametocyte-specific factor 1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045141166.1
SIO_010081: LOC123457081
subclass of: SO_0000673
so part of: LOC123457081
location: join(5819751..5819781,5821182..5821225,5823366..5823466,5825590..5825716,5826338..5826421,5826880..5826946,5829549..5829630,5830702..5830735,5832662..5832773)
location: region:5819751-5832773:1
so has part: feature:5819751-5819781:1:exon
so has part: feature:5821182-5821225:1:exon
so has part: feature:5823366-5823466:1:exon
so has part: feature:5825590-5825716:1:exon
so has part: feature:5826338-5826421:1:exon
so has part: feature:5826880-5826946:1:exon
so has part: feature:5829549-5829630:1:exon
so has part: feature:5830702-5830735:1:exon
so has part: feature:5832662-5832773:1:exon

position:5819751:1
position: 5819751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5819751-5819781:1:exon

position:5819781:1
position: 5819781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5821182-5821225:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5823366-5823466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5825590-5825716:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5826338-5826421:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5826880-5826946:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5829549-5829630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5830702-5830735:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5832662-5832773:1:exon

LOC123457081
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457081
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1-like
translation: MDSPDPERLLQCPYVKSHHIRACRFPYHLIKCKKNHPDVAKNLATCPFNARHLVPRAELSHHISICDDRCCIEQDEVNPTRNPGQDTLPKNTWQYPPCDEDWDLELAEENNSTPFIWGTTRFCENKCPVSNAAMEPKSNLASGKQVPKTLPWKTVDMDSN
SIO_010081: LOC123457081
subclass of: SO_0000673
so part of: LOC123457081
location: join(5821225,5823366..5823466,5825590..5825716,5826338..5826421,5826880..5826946,5829549..5829630,5830702..5830722)
location: region:5821225-5830722:1
so has part: feature:5821225-5821225:1:exon
so has part: feature:5823366-5823466:1:exon
so has part: feature:5825590-5825716:1:exon
so has part: feature:5826338-5826421:1:exon
so has part: feature:5826880-5826946:1:exon
so has part: feature:5829549-5829630:1:exon
so has part: feature:5830702-5830722:1:exon

XP_044997101.1
type: Protein
SIO_000068: ncbiprotein

position:5830722:1
position: 5830722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5821225-5821225:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5823366-5823466:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5825590-5825716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5826338-5826421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5826880-5826946:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5829549-5829630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5830702-5830722:1:exon

LOC123457081
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457081
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1-like
translation: MDSPDPERLLQCPYVKSHHIRACRFPYHLIKCKKNHPDVAKNLATCPFNARHLVPRAELSHHISICDDRCCIEQDEVNPTRNPGQDTLPKNTWQYPPCDEDWDLELAEENNSTPFIWGTTRFCENKCPVSNAAMEPKSNLASGKQVPKTLPWKTVDMDSN
SIO_010081: LOC123457081
subclass of: SO_0000673
so part of: LOC123457081
location: join(5821225,5823366..5823466,5825590..5825716,5826338..5826421,5826880..5826946,5829549..5829630,5830702..5830722)
location: region:5821225-5830722:1
so has part: feature:5821225-5821225:1:exon
so has part: feature:5823366-5823466:1:exon
so has part: feature:5825590-5825716:1:exon
so has part: feature:5826338-5826421:1:exon
so has part: feature:5826880-5826946:1:exon
so has part: feature:5829549-5829630:1:exon
so has part: feature:5830702-5830722:1:exon

XP_044997102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5821225-5821225:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5823366-5823466:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5825590-5825716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5826338-5826421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5826880-5826946:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5829549-5829630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5830702-5830722:1:exon

LOC123457073
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457073
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6001660..6003312)
location: region:6001660-6003312:-1
so has part: feature:6001660-6003312:-1:exon

123457073
type: Gene
SIO_000068: ncbigene

position:6001660:-1
position: 6001660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6003312:-1
position: 6003312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6001660-6003312:-1:exon

LOC123457073
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457073
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457073
subclass of: SO_0000673
so part of: LOC123457073
location: complement(6001660..6003312)
location: region:6001660-6003312:-1
so has part: feature:6001660-6003312:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6001660-6003312:-1:exon

LOC123457053
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457053
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6056627..6073043
location: region:6056627-6073043:1
so has part: feature:6056627-6073043:1:exon

123457053
type: Gene
SIO_000068: ncbigene

position:6056627:1
position: 6056627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6073043:1
position: 6073043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6056627-6073043:1:exon

LOC123457053
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457053
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457053
subclass of: SO_0000673
so part of: LOC123457053
location: 6056627..6057425
location: region:6056627-6057425:1
so has part: feature:6056627-6057425:1:exon

position:6057425:1
position: 6057425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6056627-6057425:1:exon

LOC123457053
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457053
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457053
subclass of: SO_0000673
so part of: LOC123457053
location: 6062014..6062210
location: region:6062014-6062210:1
so has part: feature:6062014-6062210:1:exon

position:6062014:1
position: 6062014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6062210:1
position: 6062210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6062014-6062210:1:exon

LOC123457053
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457053
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457053
subclass of: SO_0000673
so part of: LOC123457053
location: 6063644..6063653
location: region:6063644-6063653:1
so has part: feature:6063644-6063653:1:exon

position:6063644:1
position: 6063644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6063653:1
position: 6063653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6063644-6063653:1:exon

LOC123457053
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457053
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457053
subclass of: SO_0000673
so part of: LOC123457053
location: 6064566..6064733
location: region:6064566-6064733:1
so has part: feature:6064566-6064733:1:exon

position:6064566:1
position: 6064566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6064733:1
position: 6064733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6064566-6064733:1:exon

LOC123457053
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457053
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457053
subclass of: SO_0000673
so part of: LOC123457053
location: 6066769..6066890
location: region:6066769-6066890:1
so has part: feature:6066769-6066890:1:exon

position:6066769:1
position: 6066769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6066890:1
position: 6066890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6066769-6066890:1:exon

LOC123457053
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457053
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457053
subclass of: SO_0000673
so part of: LOC123457053
location: 6072792..6073043
location: region:6072792-6073043:1
so has part: feature:6072792-6073043:1:exon

position:6072792:1
position: 6072792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6072792-6073043:1:exon

LOC123457054
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457054
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6916895..7104862
location: region:6916895-7104862:1
so has part: feature:6916895-7104862:1:exon

123457054
type: Gene
SIO_000068: ncbigene

position:6916895:1
position: 6916895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7104862:1
position: 7104862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6916895-7104862:1:exon

LOC123457054
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457054
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457054
subclass of: SO_0000673
so part of: LOC123457054
location: 6916895..6917332
location: region:6916895-6917332:1
so has part: feature:6916895-6917332:1:exon

position:6917332:1
position: 6917332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6916895-6917332:1:exon

LOC123457054
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457054
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457054
subclass of: SO_0000673
so part of: LOC123457054
location: 6917416..6918307
location: region:6917416-6918307:1
so has part: feature:6917416-6918307:1:exon

position:6917416:1
position: 6917416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6918307:1
position: 6918307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6917416-6918307:1:exon

LOC123457054
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457054
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457054
subclass of: SO_0000673
so part of: LOC123457054
location: 6918339..6921454
location: region:6918339-6921454:1
so has part: feature:6918339-6921454:1:exon

position:6918339:1
position: 6918339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6921454:1
position: 6921454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6918339-6921454:1:exon

LOC123457123
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457123
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7100240..7100430
location: region:7100240-7100430:1
so has part: feature:7100240-7100430:1:exon
subclass of: SO_0000623

123457123
type: Gene
SIO_000068: ncbigene

position:7100240:1
position: 7100240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7100430:1
position: 7100430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7100240-7100430:1:exon

LOC123457123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457123
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634897.1
SIO_010081: LOC123457123
subclass of: SO_0000673
so part of: LOC123457123
location: 7100240..7100430
location: region:7100240-7100430:1
so has part: feature:7100240-7100430:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7100240-7100430:1:exon

LOC123457054
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457054
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457054
subclass of: SO_0000673
so part of: LOC123457054
location: 7101140..7101217
location: region:7101140-7101217:1
so has part: feature:7101140-7101217:1:exon

position:7101140:1
position: 7101140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7101217:1
position: 7101217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7101140-7101217:1:exon

LOC123457054
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457054
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457054
subclass of: SO_0000673
so part of: LOC123457054
location: 7102168..7102245
location: region:7102168-7102245:1
so has part: feature:7102168-7102245:1:exon

position:7102168:1
position: 7102168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7102245:1
position: 7102245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7102168-7102245:1:exon

LOC123457054
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457054
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457054
subclass of: SO_0000673
so part of: LOC123457054
location: 7104710..7104862
location: region:7104710-7104862:1
so has part: feature:7104710-7104862:1:exon

position:7104710:1
position: 7104710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7104710-7104862:1:exon

LOC123457084
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457084
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7168192..7168841
location: region:7168192-7168841:1
so has part: feature:7168192-7168841:1:exon

123457084
type: Gene
SIO_000068: ncbigene

position:7168192:1
position: 7168192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7168841:1
position: 7168841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7168192-7168841:1:exon

LOC123457084
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457084
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457084
subclass of: SO_0000673
so part of: LOC123457084
location: 7168192..7168841
location: region:7168192-7168841:1
so has part: feature:7168192-7168841:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7168192-7168841:1:exon

LOC123457092
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457092
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7249843..7250032)
location: region:7249843-7250032:-1
so has part: feature:7249843-7250032:-1:exon
subclass of: SO_0000623

123457092
type: Gene
SIO_000068: ncbigene

position:7249843:-1
position: 7249843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7250032:-1
position: 7250032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7249843-7250032:-1:exon

LOC123457092
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457092
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634872.1
SIO_010081: LOC123457092
subclass of: SO_0000673
so part of: LOC123457092
location: complement(7249843..7250032)
location: region:7249843-7250032:-1
so has part: feature:7249843-7250032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7249843-7250032:-1:exon

Sry
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: Sry
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7270132..7270686
location: region:7270132-7270686:1
so has part: feature:7270132-7270686:1:exon
subclass of: SO_0000010

123457056
type: Gene
SIO_000068: ncbigene

position:7270132:1
position: 7270132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7270686:1
position: 7270686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7270132-7270686:1:exon

Sry
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: Sry
product: sex determining region Y
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_045141150.1
SIO_010081: Sry
subclass of: SO_0000673
so part of: Sry
location: 7270132..7270686
location: region:7270132-7270686:1
so has part: feature:7270132-7270686:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7270132-7270686:1:exon

Sry
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: Sry
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sex-determining region Y protein
translation: MSSPSQKICPSLAQMIGVKPSESVQRTSNGRVKRPMNAFMVWSQGQRRKLALENPSMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQALHKEKYPNYRYQPRRKDKISQSSFSLLPTGTTLKQYIQVQSSGRLNSLTYREDTPPFMGSGPENQLSPSLSAETTSLLQENKHHSIISTNQCDR
SIO_010081: Sry
subclass of: SO_0000673
so part of: Sry
location: 7270132..7270686
location: region:7270132-7270686:1
so has part: feature:7270132-7270686:1:exon

XP_044997085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7270132-7270686:1:exon

LOC123457057
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457057
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7376151..7380908
location: region:7376151-7380908:1
so has part: feature:7376151-7380908:1:exon

123457057
type: Gene
SIO_000068: ncbigene

position:7376151:1
position: 7376151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7380908:1
position: 7380908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7376151-7380908:1:exon

LOC123457057
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457057
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC123457057
subclass of: SO_0000673
so part of: LOC123457057
location: 7376151..7376486
location: region:7376151-7376486:1
so has part: feature:7376151-7376486:1:exon

position:7376486:1
position: 7376486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7376151-7376486:1:exon

LOC123457057
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457057
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC123457057
subclass of: SO_0000673
so part of: LOC123457057
location: 7378183..7378742
location: region:7378183-7378742:1
so has part: feature:7378183-7378742:1:exon

position:7378183:1
position: 7378183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7378742:1
position: 7378742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7378183-7378742:1:exon

LOC123457057
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457057
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC123457057
subclass of: SO_0000673
so part of: LOC123457057
location: 7380617..7380908
location: region:7380617-7380908:1
so has part: feature:7380617-7380908:1:exon

position:7380617:1
position: 7380617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7380617-7380908:1:exon

LOC123457112
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457112
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7384480..7384669
location: region:7384480-7384669:1
so has part: feature:7384480-7384669:1:exon
subclass of: SO_0000623

123457112
type: Gene
SIO_000068: ncbigene

position:7384480:1
position: 7384480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7384669:1
position: 7384669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7384480-7384669:1:exon

LOC123457112
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457112
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634890.1
SIO_010081: LOC123457112
subclass of: SO_0000673
so part of: LOC123457112
location: 7384480..7384669
location: region:7384480-7384669:1
so has part: feature:7384480-7384669:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7384480-7384669:1:exon

LOC123457058
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457058
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7524705..7529829
location: region:7524705-7529829:1
so has part: feature:7524705-7529829:1:exon
subclass of: SO_0000010

123457058
type: Gene
SIO_000068: ncbigene

position:7524705:1
position: 7524705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7529829:1
position: 7529829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7524705-7529829:1:exon

LOC123457058
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457058
product: deleted in azoospermia-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_045141151.1
SIO_010081: LOC123457058
subclass of: SO_0000673
so part of: LOC123457058
location: join(7524705..7524710,7525677..7525805,7527055..7527201,7527988..7528079,7528955..7529006,7529758..7529829)
location: region:7524705-7529829:1
so has part: feature:7524705-7524710:1:exon
so has part: feature:7525677-7525805:1:exon
so has part: feature:7527055-7527201:1:exon
so has part: feature:7527988-7528079:1:exon
so has part: feature:7528955-7529006:1:exon
so has part: feature:7529758-7529829:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7524705-7524710:1:exon

position:7524710:1
position: 7524710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7525677-7525805:1:exon

position:7525677:1
position: 7525677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7525805:1
position: 7525805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7527055-7527201:1:exon

position:7527055:1
position: 7527055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7527201:1
position: 7527201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7527988-7528079:1:exon

position:7527988:1
position: 7527988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7528079:1
position: 7528079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7528955-7529006:1:exon

position:7528955:1
position: 7528955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7529006:1
position: 7529006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7529758-7529829:1:exon

position:7529758:1
position: 7529758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123457058
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457058
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deleted in azoospermia-like
translation: MDFATTSETPSLAISTEDNIQTSSAAISQGCVILKDRVIPNTVLLSAATSVTPNSIISREASTQMSSAATSQGYVLPEGRVILNTVFVGGIGLRMDETEIRGVFARFGSVNEVKIISDRYGLSKGYGFVSFCNNVDVQKIVESQITFHGKKLNLGPAIRKQNICE
SIO_010081: LOC123457058
subclass of: SO_0000673
so part of: LOC123457058
location: join(7524705..7524710,7525677..7525805,7527055..7527201,7527988..7528079,7528955..7529006,7529758..7529829)
location: region:7524705-7529829:1
so has part: feature:7524705-7524710:1:exon
so has part: feature:7525677-7525805:1:exon
so has part: feature:7527055-7527201:1:exon
so has part: feature:7527988-7528079:1:exon
so has part: feature:7528955-7529006:1:exon
so has part: feature:7529758-7529829:1:exon

XP_044997086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7524705-7524710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7525677-7525805:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7527055-7527201:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7527988-7528079:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7528955-7529006:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7529758-7529829:1:exon

LOC123457095
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457095
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7581633..7581824
location: region:7581633-7581824:1
so has part: feature:7581633-7581824:1:exon
subclass of: SO_0000623

123457095
type: Gene
SIO_000068: ncbigene

position:7581633:1
position: 7581633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7581824:1
position: 7581824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7581633-7581824:1:exon

LOC123457095
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457095
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634875.1
SIO_010081: LOC123457095
subclass of: SO_0000673
so part of: LOC123457095
location: 7581633..7581824
location: region:7581633-7581824:1
so has part: feature:7581633-7581824:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7581633-7581824:1:exon

LOC123457086
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7645072..7646464)
location: region:7645072-7646464:-1
so has part: feature:7645072-7646464:-1:exon

123457086
type: Gene
SIO_000068: ncbigene

position:7645072:-1
position: 7645072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7646464:-1
position: 7646464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7645072-7646464:-1:exon

LOC123457086
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457086
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 28% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457086
subclass of: SO_0000673
so part of: LOC123457086
location: complement(7645072..7646464)
location: region:7645072-7646464:-1
so has part: feature:7645072-7646464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7645072-7646464:-1:exon

LOC123457072
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457072
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7670999..7672746)
location: region:7670999-7672746:-1
so has part: feature:7670999-7672746:-1:exon
subclass of: SO_0000010

123457072
type: Gene
SIO_000068: ncbigene

position:7670999:-1
position: 7670999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7672746:-1
position: 7672746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7670999-7672746:-1:exon

LOC123457072
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457072
product: PAT complex subunit CCDC47-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045141160.1
SIO_010081: LOC123457072
subclass of: SO_0000673
so part of: LOC123457072
location: complement(7670999..7672746)
location: region:7670999-7672746:-1
so has part: feature:7670999-7672746:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7670999-7672746:-1:exon

LOC123457072
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457072
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(7672423..7672425),aa:OTHER)
transl except: (pos:complement(7671202..7671204),aa:OTHER)
product: LOW QUALITY PROTEIN: PAT complex subunit CCDC47-like
translation: MKGFYAFCIVLLVFGRVSEAKLDDFEDEEDIVEYDDNDFAEFEDVMEDSVTDSPRXVITTEDDEEETTVELEGQDENQEGDFEDSDTQEGDTESEPYDDKEFEGYEDKPDTTSSKNKDPLTIVDVPAHLQNSWESYYLEILMVTGLLAYIMNYIIGKNKNSCLAQAWFNSHRELLESNFTLVGDDGTNKEATSMGKLNQENEHIYNLWCSGQVCCEGMLIQLRFLKRQDLLNVLAWMMRPVSDQVQIKVTMNDEDMDTYMFAVSTRNALVRLQKEMQDLSEFCSDKPKSGAKYGLPDSLVILSEMGEVTEGMMDTKMVHFLTHYADKIESVHFSDQFSGPKIRQEEGQPLKLPDTKRTLLFTFNVPGSGNTYPKDMEALLPLMNMVIYSIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRCEEKKRAEKERVMNEEDPEKQRRLEEAALRXEQKKLEKKQMKMKQIKVKAM
SIO_010081: LOC123457072
subclass of: SO_0000673
so part of: LOC123457072
location: complement(7671139..7672590)
location: region:7671139-7672590:-1
so has part: feature:7671139-7672590:-1:exon

XP_044997095.1
type: Protein
SIO_000068: ncbiprotein

position:7671139:-1
position: 7671139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7672590:-1
position: 7672590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7671139-7672590:-1:exon

LOC123457096
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457096
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7905200..7905387)
location: region:7905200-7905387:-1
so has part: feature:7905200-7905387:-1:exon
subclass of: SO_0000623

123457096
type: Gene
SIO_000068: ncbigene

position:7905200:-1
position: 7905200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7905387:-1
position: 7905387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7905200-7905387:-1:exon

LOC123457096
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457096
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634876.1
SIO_010081: LOC123457096
subclass of: SO_0000673
so part of: LOC123457096
location: complement(7905200..7905387)
location: region:7905200-7905387:-1
so has part: feature:7905200-7905387:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7905200-7905387:-1:exon

LOC123457074
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457074
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8144026..8145037)
location: region:8144026-8145037:-1
so has part: feature:8144026-8145037:-1:exon

123457074
type: Gene
SIO_000068: ncbigene

position:8144026:-1
position: 8144026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8145037:-1
position: 8145037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8144026-8145037:-1:exon

LOC123457074
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457074
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457074
subclass of: SO_0000673
so part of: LOC123457074
location: complement(8144026..8145037)
location: region:8144026-8145037:-1
so has part: feature:8144026-8145037:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8144026-8145037:-1:exon

LOC101608991
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC101608991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8987281..8989200
location: region:8987281-8989200:1
so has part: feature:8987281-8989200:1:exon
subclass of: SO_0000010

101608991
type: Gene
SIO_000068: ncbigene

position:8987281:1
position: 8987281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8989200:1
position: 8989200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8987281-8989200:1:exon

LOC101608991
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC101608991
product: zinc finger protein 189
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045141153.1
SIO_010081: LOC101608991
subclass of: SO_0000673
so part of: LOC101608991
location: 8987281..8989200
location: region:8987281-8989200:1
so has part: feature:8987281-8989200:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8987281-8989200:1:exon

LOC101608991
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC101608991
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:8987639..8987641,aa:OTHER)
transl except: (pos:8988974..8988976,aa:OTHER)
product: LOW QUALITY PROTEIN: zinc finger protein 189
translation: MASLSPPLEPKEEWDYLDPAQRSLYKDVMIENYGNLVSLGALNRDKDDEATVKQEIEETEEEVEPQGVILTRIKSKIAQEPIGRESFELVGRLDKQRGIFLWEIPRXSLAQEEKLFGGNTNIIRKRPNSXKCHKCEERGKGFVRKAHFIQHQRVHTGEKPFQCNEWGKSFSRSSFVIEHQRIHTGERPYECNYCGKTFSVSSSLIKHQRIHTGERPYQCSQCKQSFSHRRSIVKHQRIHTGEKPPKCNDCGKAFSCKSLLVEHQRTHTGEKPYHSTKCKKSFSRNSLLVEHQRIHTGERPHKCGECGKAFIPSTYLIQHQKIHSGEKPFLCIECWKSFSQSSFLIEHQRIHTGERPYQCKECGKSFSQFCNLTHHQRIHTGDKPHKCEECGKAFSRSSGLIQHQRIHTRKKTFPYSEAKESVHPSGSLVXQQKVYTKEKSYKCDECGKTFSVSAHLVQHQRIHTGEKSYLCTVCGKSFSRSSFLIEHQRINTGERPYLCRQCGKSFSQLCNLIRHQGVHTGNKPHKCEECGKAFSRNSGLTQHQRIHTGEKPXKCETCDKSFSQQRSLINHQKIHAQVNIQEAHECDACGEAFSCQISLIQHQKXHTTWMQSVSNSRRSVLRQATKV
SIO_010081: LOC101608991
subclass of: SO_0000673
so part of: LOC101608991
location: 8987321..8989200
location: region:8987321-8989200:1
so has part: feature:8987321-8989200:1:exon

XP_044997088.1
type: Protein
SIO_000068: ncbiprotein

position:8987321:1
position: 8987321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8987321-8989200:1:exon

LOC123457078
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8992773..9011056)
location: region:8992773-9011056:-1
so has part: feature:8992773-9011056:-1:exon
subclass of: SO_0000010

123457078
type: Gene
SIO_000068: ncbigene

position:8992773:-1
position: 8992773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9011056:-1
position: 9011056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8992773-9011056:-1:exon

LOC123457078
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457078
product: gametocyte-specific factor 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045141161.1
SIO_010081: LOC123457078
subclass of: SO_0000673
so part of: LOC123457078
location: complement(join(8992773..8992876,8994786..8994819,8995840..8995922,9001618..9001684,9002135..9002218,9002807..9002933,9005080..9005180,9009332..9009375,9010974..9011056))
location: region:8992773-9011056:-1
so has part: feature:9010974-9011056:-1:exon
so has part: feature:9009332-9009375:-1:exon
so has part: feature:9005080-9005180:-1:exon
so has part: feature:9002807-9002933:-1:exon
so has part: feature:9002135-9002218:-1:exon
so has part: feature:9001618-9001684:-1:exon
so has part: feature:8995840-8995922:-1:exon
so has part: feature:8994786-8994819:-1:exon
so has part: feature:8992773-8992876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9010974-9011056:-1:exon

position:9010974:-1
position: 9010974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9009332-9009375:-1:exon

position:9009332:-1
position: 9009332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9009375:-1
position: 9009375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9005080-9005180:-1:exon

position:9005080:-1
position: 9005080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9005180:-1
position: 9005180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9002807-9002933:-1:exon

position:9002807:-1
position: 9002807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9002933:-1
position: 9002933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9002135-9002218:-1:exon

position:9002135:-1
position: 9002135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9002218:-1
position: 9002218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9001618-9001684:-1:exon

position:9001618:-1
position: 9001618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9001684:-1
position: 9001684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8995840-8995922:-1:exon

position:8995840:-1
position: 8995840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8995922:-1
position: 8995922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8994786-8994819:-1:exon

position:8994786:-1
position: 8994786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8994819:-1
position: 8994819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8992773-8992876:-1:exon

position:8992876:-1
position: 8992876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123457078
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1-like
translation: MESPDPERLLQCPYDKNHHIRACRFPYHLIKCKKNHPDVAKQLATCPFNARHLVPRAELSHHISICDDRCCIEQDVVSPTTNPEQDTLPKNTLQYPPCDEDWEQELAEENNSTPFIWGTTRFCENKCPASNTAMEPKSNLASGKQVPKTLPWKNSGYRQ
SIO_010081: LOC123457078
subclass of: SO_0000673
so part of: LOC123457078
location: complement(join(8994803..8994819,8995840..8995922,9001618..9001684,9002135..9002218,9002807..9002933,9005080..9005180,9009332))
location: region:8994803-9009332:-1
so has part: feature:9009332-9009332:-1:exon
so has part: feature:9005080-9005180:-1:exon
so has part: feature:9002807-9002933:-1:exon
so has part: feature:9002135-9002218:-1:exon
so has part: feature:9001618-9001684:-1:exon
so has part: feature:8995840-8995922:-1:exon
so has part: feature:8994803-8994819:-1:exon

XP_044997096.1
type: Protein
SIO_000068: ncbiprotein

position:8994803:-1
position: 8994803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9009332-9009332:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9005080-9005180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9002807-9002933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9002135-9002218:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9001618-9001684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8995840-8995922:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8994803-8994819:-1:exon

LOC123457059
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457059
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(9019142..9052004)
location: region:9019142-9052004:-1
so has part: feature:9019142-9052004:-1:exon

123457059
type: Gene
SIO_000068: ncbigene

position:9019142:-1
position: 9019142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9052004:-1
position: 9052004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9019142-9052004:-1:exon

LOC123457059
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457059
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC123457059
subclass of: SO_0000673
so part of: LOC123457059
location: complement(9019142..9019258)
location: region:9019142-9019258:-1
so has part: feature:9019142-9019258:-1:exon

position:9019258:-1
position: 9019258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9019142-9019258:-1:exon

LOC123457059
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457059
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC123457059
subclass of: SO_0000673
so part of: LOC123457059
location: complement(9021332..9021451)
location: region:9021332-9021451:-1
so has part: feature:9021332-9021451:-1:exon

position:9021332:-1
position: 9021332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9021451:-1
position: 9021451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9021332-9021451:-1:exon

LOC123457059
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457059
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC123457059
subclass of: SO_0000673
so part of: LOC123457059
location: complement(9028808..9028926)
location: region:9028808-9028926:-1
so has part: feature:9028808-9028926:-1:exon

position:9028808:-1
position: 9028808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9028926:-1
position: 9028926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9028808-9028926:-1:exon

LOC123457059
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457059
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC123457059
subclass of: SO_0000673
so part of: LOC123457059
location: complement(9039247..9039329)
location: region:9039247-9039329:-1
so has part: feature:9039247-9039329:-1:exon

position:9039247:-1
position: 9039247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9039329:-1
position: 9039329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9039247-9039329:-1:exon

LOC123457059
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457059
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC123457059
subclass of: SO_0000673
so part of: LOC123457059
location: complement(9041094..9041160)
location: region:9041094-9041160:-1
so has part: feature:9041094-9041160:-1:exon

position:9041094:-1
position: 9041094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9041160:-1
position: 9041160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9041094-9041160:-1:exon

LOC123457059
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457059
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC123457059
subclass of: SO_0000673
so part of: LOC123457059
location: complement(9041606..9041689)
location: region:9041606-9041689:-1
so has part: feature:9041606-9041689:-1:exon

position:9041606:-1
position: 9041606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9041689:-1
position: 9041689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9041606-9041689:-1:exon

LOC123457059
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457059
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC123457059
subclass of: SO_0000673
so part of: LOC123457059
location: complement(9042360..9042493)
location: region:9042360-9042493:-1
so has part: feature:9042360-9042493:-1:exon

position:9042360:-1
position: 9042360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9042493:-1
position: 9042493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9042360-9042493:-1:exon

LOC123457059
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457059
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC123457059
subclass of: SO_0000673
so part of: LOC123457059
location: complement(9044732..9044825)
location: region:9044732-9044825:-1
so has part: feature:9044732-9044825:-1:exon

position:9044732:-1
position: 9044732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9044825:-1
position: 9044825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9044732-9044825:-1:exon

LOC123457059
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457059
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC123457059
subclass of: SO_0000673
so part of: LOC123457059
location: complement(9051944..9052004)
location: region:9051944-9052004:-1
so has part: feature:9051944-9052004:-1:exon

position:9051944:-1
position: 9051944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9051944-9052004:-1:exon

LOC123457087
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9052666..9072411)
location: region:9052666-9072411:-1
so has part: feature:9052666-9072411:-1:exon
subclass of: SO_0000010

123457087
type: Gene
SIO_000068: ncbigene

position:9052666:-1
position: 9052666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9072411:-1
position: 9072411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9052666-9072411:-1:exon

LOC123457087
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457087
product: gametocyte-specific factor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045141172.1
SIO_010081: LOC123457087
subclass of: SO_0000673
so part of: LOC123457087
location: complement(join(9052666..9052708,9054654..9054687,9056347..9056429,9060462..9060528,9061307..9061390,9062008..9062134,9066450..9066550,9070588..9070631,9072363..9072411))
location: region:9052666-9072411:-1
so has part: feature:9072363-9072411:-1:exon
so has part: feature:9070588-9070631:-1:exon
so has part: feature:9066450-9066550:-1:exon
so has part: feature:9062008-9062134:-1:exon
so has part: feature:9061307-9061390:-1:exon
so has part: feature:9060462-9060528:-1:exon
so has part: feature:9056347-9056429:-1:exon
so has part: feature:9054654-9054687:-1:exon
so has part: feature:9052666-9052708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9072363-9072411:-1:exon

position:9072363:-1
position: 9072363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9070588-9070631:-1:exon

position:9070588:-1
position: 9070588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9070631:-1
position: 9070631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9066450-9066550:-1:exon

position:9066450:-1
position: 9066450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9066550:-1
position: 9066550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9062008-9062134:-1:exon

position:9062008:-1
position: 9062008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9062134:-1
position: 9062134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9061307-9061390:-1:exon

position:9061307:-1
position: 9061307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9061390:-1
position: 9061390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9060462-9060528:-1:exon

position:9060462:-1
position: 9060462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9060528:-1
position: 9060528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9056347-9056429:-1:exon

position:9056347:-1
position: 9056347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9056429:-1
position: 9056429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9054654-9054687:-1:exon

position:9054654:-1
position: 9054654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9054687:-1
position: 9054687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9052666-9052708:-1:exon

position:9052708:-1
position: 9052708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123457087
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1-like
translation: MESPDPERLLQCPYDKKHRIRACRFPYHLIKCKKNHPDVAKQLATCPFNARHLVPRAELSHHISICDDRCCIEQDVVIPTRNPGEDTLPKNTLQYPACDEDWDKELAEENNTTPFIWGTTRFCDNKCPASNTAMEHKSNLASGKQVPKTQPWKNSGYGQ
SIO_010081: LOC123457087
subclass of: SO_0000673
so part of: LOC123457087
location: complement(join(9054671..9054687,9056347..9056429,9060462..9060528,9061307..9061390,9062008..9062134,9066450..9066550,9070588))
location: region:9054671-9070588:-1
so has part: feature:9070588-9070588:-1:exon
so has part: feature:9066450-9066550:-1:exon
so has part: feature:9062008-9062134:-1:exon
so has part: feature:9061307-9061390:-1:exon
so has part: feature:9060462-9060528:-1:exon
so has part: feature:9056347-9056429:-1:exon
so has part: feature:9054671-9054687:-1:exon

XP_044997107.1
type: Protein
SIO_000068: ncbiprotein

position:9054671:-1
position: 9054671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9070588-9070588:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9066450-9066550:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9062008-9062134:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9061307-9061390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9060462-9060528:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9056347-9056429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9054671-9054687:-1:exon

LOC123457135
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457135
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 9137461..9137526
location: region:9137461-9137526:1
so has part: feature:9137461-9137526:1:exon
subclass of: SO_0000578

123457135
type: Gene
SIO_000068: ncbigene

position:9137461:1
position: 9137461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9137526:1
position: 9137526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9137461-9137526:1:exon

LOC123457135
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snoRNA
gene: LOC123457135
product: small nucleolar RNA SNORD43
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00221
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634909.1
SIO_010081: LOC123457135
subclass of: SO_0000673
so part of: LOC123457135
location: 9137461..9137526
location: region:9137461-9137526:1
so has part: feature:9137461-9137526:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9137461-9137526:1:exon

LOC123457090
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457090
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 9155415..9155541
location: region:9155415-9155541:1
so has part: feature:9155415-9155541:1:exon
subclass of: SO_0000578

123457090
type: Gene
SIO_000068: ncbigene

position:9155415:1
position: 9155415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9155541:1
position: 9155541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9155415-9155541:1:exon

LOC123457090
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snoRNA
gene: LOC123457090
product: small nucleolar RNA SNORA33
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00438
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634870.1
SIO_010081: LOC123457090
subclass of: SO_0000673
so part of: LOC123457090
location: 9155415..9155541
location: region:9155415-9155541:1
so has part: feature:9155415-9155541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9155415-9155541:1:exon

LOC123457060
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9171002..9172688)
location: region:9171002-9172688:-1
so has part: feature:9171002-9172688:-1:exon
subclass of: SO_0000010

123457060
type: Gene
SIO_000068: ncbigene

position:9171002:-1
position: 9171002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9172688:-1
position: 9172688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9171002-9172688:-1:exon

LOC123457060
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457060
product: heat shock transcription factor, Y-linked-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_045141154.1
SIO_010081: LOC123457060
subclass of: SO_0000673
so part of: LOC123457060
location: complement(join(9171002..9171688,9172173..9172688))
location: region:9171002-9172688:-1
so has part: feature:9172173-9172688:-1:exon
so has part: feature:9171002-9171688:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9172173-9172688:-1:exon

position:9172173:-1
position: 9172173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9171002-9171688:-1:exon

position:9171688:-1
position: 9171688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123457060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock transcription factor, Y-linked-like
translation: MAQVPSEIQDIYPKDGSPVSDALVKSRPCDNTLLEDTGLMAKVEETAFQLLCQQSLITHPCCALRVNDPQEDSDFFSLTFPKKLWKIVESNKFKSVCWDEEGTSIVINVELFKKEVLERKPPFRIFETSSMKSLVRQLNLYGFSKVQQNCQRSASLDDFMAEEKEGSAKVTKFKFYRNPNFIRGHPHLLLRMKRRVGVKNASRATASLVPEFNSTLRTQSNIYKHNCGLVDEAREQSLLSTSANLNVPQMNKAPTGQGMTCTNYPMGSDFCPPSSYLVRPSEQMPTVQYSISSHFSTFYMHTHCSYSQANGNNLNFISTSSPEFQIVSPLHNTHFGLPMEHPNCLTDHLNFSANQSCYYNLLPTRHPWLPTSNVTNISTDSQSTSTYLPSSILQCNPKDK
SIO_010081: LOC123457060
subclass of: SO_0000673
so part of: LOC123457060
location: complement(join(9171002..9171688,9172173..9172688))
location: region:9171002-9172688:-1
so has part: feature:9172173-9172688:-1:exon
so has part: feature:9171002-9171688:-1:exon

XP_044997089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9172173-9172688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9171002-9171688:-1:exon

LOC123457071
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9223095..9223343
location: region:9223095-9223343:1
so has part: feature:9223095-9223343:1:exon
subclass of: SO_0000010

123457071
type: Gene
SIO_000068: ncbigene

position:9223095:1
position: 9223095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9223343:1
position: 9223343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9223095-9223343:1:exon

LOC123457071
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457071
product: mitochondrial import inner membrane translocase subunit Tim8 B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045141159.1
SIO_010081: LOC123457071
subclass of: SO_0000673
so part of: LOC123457071
location: 9223095..9223343
location: region:9223095-9223343:1
so has part: feature:9223095-9223343:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9223095-9223343:1:exon

LOC123457071
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit Tim8 B-like
translation: MVELGEAEEAKLQRLLATEQQKVQFMAQVHGFMELCWDKCAEKSGNGLDSHTENCLSSCVDCFIDTTLAITSRFAQIVQKGQ
SIO_010081: LOC123457071
subclass of: SO_0000673
so part of: LOC123457071
location: 9223095..9223343
location: region:9223095-9223343:1
so has part: feature:9223095-9223343:1:exon

XP_044997094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9223095-9223343:1:exon

LOC123457061
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457061
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9230574..9303822
location: region:9230574-9303822:1
so has part: feature:9230574-9303822:1:exon
subclass of: SO_0000010

123457061
type: Gene
SIO_000068: ncbigene

position:9230574:1
position: 9230574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9303822:1
position: 9303822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9230574-9303822:1:exon

LOC123457061
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457061
product: zinc finger protein 844-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_045141155.1
SIO_010081: LOC123457061
subclass of: SO_0000673
so part of: LOC123457061
location: join(9230574..9230768,9231379..9231597,9231914..9232010,9303716..9303822)
location: region:9230574-9303822:1
so has part: feature:9230574-9230768:1:exon
so has part: feature:9231379-9231597:1:exon
so has part: feature:9231914-9232010:1:exon
so has part: feature:9303716-9303822:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9230574-9230768:1:exon

position:9230768:1
position: 9230768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9231379-9231597:1:exon

position:9231379:1
position: 9231379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9231597:1
position: 9231597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9231914-9232010:1:exon

position:9231914:1
position: 9231914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9232010:1
position: 9232010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9303716-9303822:1:exon

position:9303716:1
position: 9303716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123457061
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457061
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 844-like
translation: MQKNPMNVHSVVKLSNVTVTFKYMKEVMLEKSRMNVNNVVMPSEVAITFASMKELMKNSTSVNRLDMKKLMLKENSMNVNNVTKPSEVTVIIEYMKKLTLKENPMCVSSVVKPSGLSVILEHMKELMQKENPMNVNNVCKQCGKILSCSSFLQLHERTHTGVKPYECKQCDDSDKWDEPKGNIVLGSCDGEQKHVNHSLHDQVTL
SIO_010081: LOC123457061
subclass of: SO_0000673
so part of: LOC123457061
location: join(9230574..9230768,9231379..9231597,9231914..9232010,9303716..9303822)
location: region:9230574-9303822:1
so has part: feature:9230574-9230768:1:exon
so has part: feature:9231379-9231597:1:exon
so has part: feature:9231914-9232010:1:exon
so has part: feature:9303716-9303822:1:exon

XP_044997090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9230574-9230768:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9231379-9231597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9231914-9232010:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9303716-9303822:1:exon

LOC123457082
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457082
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9492333..9511792)
location: region:9492333-9511792:-1
so has part: feature:9492333-9511792:-1:exon
subclass of: SO_0000010

123457082
type: Gene
SIO_000068: ncbigene

position:9492333:-1
position: 9492333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9511792:-1
position: 9511792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9492333-9511792:-1:exon

LOC123457082
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457082
product: gametocyte-specific factor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_045141168.1
SIO_010081: LOC123457082
subclass of: SO_0000673
so part of: LOC123457082
location: complement(join(9492333..9492652,9495902..9495935,9497604..9497686,9501726..9501792,9502240..9502323,9502940..9503066,9506831..9506931,9511779..9511792))
location: region:9492333-9511792:-1
so has part: feature:9511779-9511792:-1:exon
so has part: feature:9506831-9506931:-1:exon
so has part: feature:9502940-9503066:-1:exon
so has part: feature:9502240-9502323:-1:exon
so has part: feature:9501726-9501792:-1:exon
so has part: feature:9497604-9497686:-1:exon
so has part: feature:9495902-9495935:-1:exon
so has part: feature:9492333-9492652:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9511779-9511792:-1:exon

position:9511779:-1
position: 9511779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9506831-9506931:-1:exon

position:9506831:-1
position: 9506831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9506931:-1
position: 9506931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9502940-9503066:-1:exon

position:9502940:-1
position: 9502940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9503066:-1
position: 9503066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9502240-9502323:-1:exon

position:9502240:-1
position: 9502240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9502323:-1
position: 9502323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9501726-9501792:-1:exon

position:9501726:-1
position: 9501726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9501792:-1
position: 9501792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9497604-9497686:-1:exon

position:9497604:-1
position: 9497604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9497686:-1
position: 9497686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9495902-9495935:-1:exon

position:9495902:-1
position: 9495902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9495935:-1
position: 9495935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9492333-9492652:-1:exon

position:9492652:-1
position: 9492652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123457082
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457082
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1-like
translation: MESPDPERLLQCPYDKKHRIRACRFPYHLIKCKKNHPDVAKQLATCPFNARHLVPRAELSHHISICDDRCCIEQDVVIPTRNPGEDTLPKSTLQHPPCDEDWDKELAEENNTTPFIWGTTSFCDNKCPASNTAMEHKSNLASGKQVPKTQPWKNSGYGQ
SIO_010081: LOC123457082
subclass of: SO_0000673
so part of: LOC123457082
location: complement(join(9495919..9495935,9497604..9497686,9501726..9501792,9502240..9502323,9502940..9503066,9506831..9506931,9511779))
location: region:9495919-9511779:-1
so has part: feature:9511779-9511779:-1:exon
so has part: feature:9506831-9506931:-1:exon
so has part: feature:9502940-9503066:-1:exon
so has part: feature:9502240-9502323:-1:exon
so has part: feature:9501726-9501792:-1:exon
so has part: feature:9497604-9497686:-1:exon
so has part: feature:9495919-9495935:-1:exon

XP_044997103.1
type: Protein
SIO_000068: ncbiprotein

position:9495919:-1
position: 9495919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9511779-9511779:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9506831-9506931:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9502940-9503066:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9502240-9502323:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9501726-9501792:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9497604-9497686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9495919-9495935:-1:exon

LOC123457062
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(9550920..9650378)
location: region:9550920-9650378:-1
so has part: feature:9550920-9650378:-1:exon

123457062
type: Gene
SIO_000068: ncbigene

position:9550920:-1
position: 9550920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9650378:-1
position: 9650378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9550920-9650378:-1:exon

LOC123457062
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457062
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457062
subclass of: SO_0000673
so part of: LOC123457062
location: complement(9550920..9551088)
location: region:9550920-9551088:-1
so has part: feature:9550920-9551088:-1:exon

position:9551088:-1
position: 9551088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9550920-9551088:-1:exon

LOC123457062
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457062
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457062
subclass of: SO_0000673
so part of: LOC123457062
location: complement(9645493..9645689)
location: region:9645493-9645689:-1
so has part: feature:9645493-9645689:-1:exon

position:9645493:-1
position: 9645493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9645689:-1
position: 9645689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9645493-9645689:-1:exon

LOC123457062
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457062
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457062
subclass of: SO_0000673
so part of: LOC123457062
location: complement(9649580..9650378)
location: region:9649580-9650378:-1
so has part: feature:9649580-9650378:-1:exon

position:9649580:-1
position: 9649580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9649580-9650378:-1:exon

LOC123457063
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457063
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9887465..9903787
location: region:9887465-9903787:1
so has part: feature:9887465-9903787:1:exon

123457063
type: Gene
SIO_000068: ncbigene

position:9887465:1
position: 9887465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9903787:1
position: 9903787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9887465-9903787:1:exon

LOC123457063
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457063
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457063
subclass of: SO_0000673
so part of: LOC123457063
location: 9887465..9888263
location: region:9887465-9888263:1
so has part: feature:9887465-9888263:1:exon

position:9888263:1
position: 9888263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9887465-9888263:1:exon

LOC123457063
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457063
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457063
subclass of: SO_0000673
so part of: LOC123457063
location: 9892821..9893017
location: region:9892821-9893017:1
so has part: feature:9892821-9893017:1:exon

position:9892821:1
position: 9892821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9893017:1
position: 9893017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9892821-9893017:1:exon

LOC123457063
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457063
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457063
subclass of: SO_0000673
so part of: LOC123457063
location: 9894452..9894461
location: region:9894452-9894461:1
so has part: feature:9894452-9894461:1:exon

position:9894452:1
position: 9894452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9894461:1
position: 9894461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9894452-9894461:1:exon

LOC123457063
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457063
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457063
subclass of: SO_0000673
so part of: LOC123457063
location: 9895374..9895541
location: region:9895374-9895541:1
so has part: feature:9895374-9895541:1:exon

position:9895374:1
position: 9895374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9895541:1
position: 9895541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9895374-9895541:1:exon

LOC123457063
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457063
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457063
subclass of: SO_0000673
so part of: LOC123457063
location: 9897561..9897682
location: region:9897561-9897682:1
so has part: feature:9897561-9897682:1:exon

position:9897561:1
position: 9897561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9897682:1
position: 9897682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9897561-9897682:1:exon

LOC123457063
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457063
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457063
subclass of: SO_0000673
so part of: LOC123457063
location: 9903536..9903787
location: region:9903536-9903787:1
so has part: feature:9903536-9903787:1:exon

position:9903536:1
position: 9903536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9903536-9903787:1:exon

LOC123457077
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457077
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 10024497..10025887
location: region:10024497-10025887:1
so has part: feature:10024497-10025887:1:exon

123457077
type: Gene
SIO_000068: ncbigene

position:10024497:1
position: 10024497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10025887:1
position: 10025887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10024497-10025887:1:exon

LOC123457077
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457077
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC123457077
subclass of: SO_0000673
so part of: LOC123457077
location: 10024497..10024809
location: region:10024497-10024809:1
so has part: feature:10024497-10024809:1:exon

position:10024809:1
position: 10024809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10024497-10024809:1:exon

LOC123457077
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457077
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC123457077
subclass of: SO_0000673
so part of: LOC123457077
location: 10024987..10025887
location: region:10024987-10025887:1
so has part: feature:10024987-10025887:1:exon

position:10024987:1
position: 10024987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10024987-10025887:1:exon

LOC123457064
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457064
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 10033850..10034435
location: region:10033850-10034435:1
so has part: feature:10033850-10034435:1:exon

123457064
type: Gene
SIO_000068: ncbigene

position:10033850:1
position: 10033850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10034435:1
position: 10034435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10033850-10034435:1:exon

LOC123457064
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457064
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 33% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457064
subclass of: SO_0000673
so part of: LOC123457064
location: 10033850..10033882
location: region:10033850-10033882:1
so has part: feature:10033850-10033882:1:exon

position:10033882:1
position: 10033882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10033850-10033882:1:exon

LOC123457064
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457064
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 33% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457064
subclass of: SO_0000673
so part of: LOC123457064
location: 10033917..10034435
location: region:10033917-10034435:1
so has part: feature:10033917-10034435:1:exon

position:10033917:1
position: 10033917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10033917-10034435:1:exon

LOC123457100
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457100
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(10057426..10057529)
location: region:10057426-10057529:-1
so has part: feature:10057426-10057529:-1:exon
subclass of: SO_0000623

123457100
type: Gene
SIO_000068: ncbigene

position:10057426:-1
position: 10057426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10057529:-1
position: 10057529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10057426-10057529:-1:exon

LOC123457100
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457100
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634879.1
SIO_010081: LOC123457100
subclass of: SO_0000673
so part of: LOC123457100
location: complement(10057426..10057529)
location: region:10057426-10057529:-1
so has part: feature:10057426-10057529:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10057426-10057529:-1:exon

LOC123457126
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457126
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 10105997..10106101
location: region:10105997-10106101:1
so has part: feature:10105997-10106101:1:exon
subclass of: SO_0000623

123457126
type: Gene
SIO_000068: ncbigene

position:10105997:1
position: 10105997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10106101:1
position: 10106101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10105997-10106101:1:exon

LOC123457126
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457126
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634900.1
SIO_010081: LOC123457126
subclass of: SO_0000673
so part of: LOC123457126
location: 10105997..10106101
location: region:10105997-10106101:1
so has part: feature:10105997-10106101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10105997-10106101:1:exon

LOC123457065
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457065
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10158450..10161999
location: region:10158450-10161999:1
so has part: feature:10158450-10161999:1:exon
subclass of: SO_0000010

123457065
type: Gene
SIO_000068: ncbigene

position:10158450:1
position: 10158450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10161999:1
position: 10161999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10158450-10161999:1:exon

LOC123457065
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457065
product: heat shock transcription factor, X-linked member 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_045141156.1
SIO_010081: LOC123457065
subclass of: SO_0000673
so part of: LOC123457065
location: join(10158450..10158938,10161412..10161999)
location: region:10158450-10161999:1
so has part: feature:10158450-10158938:1:exon
so has part: feature:10161412-10161999:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10158450-10158938:1:exon

position:10158938:1
position: 10158938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10161412-10161999:1:exon

position:10161412:1
position: 10161412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123457065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457065
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock transcription factor, X-linked member 3-like
translation: MNIQSMKKNNKSFGKPVVGEEPARAAPSEASCDPNGDTRGGSEAQSAQGRSRDPRLGENLETEPDHHARSEEGTSSLLGLPFPRKLWAVVENEAFKSVGWSEEGDTVKIEGELFEAEVLNRSGADKIFEMDSLRCFICELNLHGFRKIRTKNSPVYPGKKKMMIFQNATFKRDNPRLLENIWRRGCQRSPAQEEPCCKRRKLVCPQCSPHLQKKKQEKTISLMEAPKKQAPQGQGTFLPAGVTGCPLALCPPEEHSIPCGECPPEDGHKVSPAGDRTEGSGQVSIRPSWYPDWGSVISFYNKCSSMLKAALAAISLSDLSVGEKEQGSTSESSAEEEQEGFRQNKCVICVLYKDTSRS
SIO_010081: LOC123457065
subclass of: SO_0000673
so part of: LOC123457065
location: join(10158450..10158938,10161412..10161999)
location: region:10158450-10161999:1
so has part: feature:10158450-10158938:1:exon
so has part: feature:10161412-10161999:1:exon

XP_044997091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10158450-10158938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10161412-10161999:1:exon

LOC123457120
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457120
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 10202229..10202342
location: region:10202229-10202342:1
so has part: feature:10202229-10202342:1:exon

123457120
type: Gene
SIO_000068: ncbigene

position:10202229:1
position: 10202229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10202342:1
position: 10202342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10202229-10202342:1:exon

LOC123457120
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457120
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123457120
subclass of: SO_0000673
so part of: LOC123457120
location: 10202229..10202342
location: region:10202229-10202342:1
so has part: feature:10202229-10202342:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10202229-10202342:1:exon

LOC123457066
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(10264949..10265634)
location: region:10264949-10265634:-1
so has part: feature:10264949-10265634:-1:exon

123457066
type: Gene
SIO_000068: ncbigene

position:10264949:-1
position: 10264949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10265634:-1
position: 10265634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10264949-10265634:-1:exon

LOC123457066
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457066
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457066
subclass of: SO_0000673
so part of: LOC123457066
location: complement(10264949..10265634)
location: region:10264949-10265634:-1
so has part: feature:10264949-10265634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10264949-10265634:-1:exon

LOC123457121
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457121
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(10298123..10298227)
location: region:10298123-10298227:-1
so has part: feature:10298123-10298227:-1:exon
subclass of: SO_0000623

123457121
type: Gene
SIO_000068: ncbigene

position:10298123:-1
position: 10298123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10298227:-1
position: 10298227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10298123-10298227:-1:exon

LOC123457121
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457121
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634895.1
SIO_010081: LOC123457121
subclass of: SO_0000673
so part of: LOC123457121
location: complement(10298123..10298227)
location: region:10298123-10298227:-1
so has part: feature:10298123-10298227:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10298123-10298227:-1:exon

LOC123457067
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457067
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(10312285..10331936)
location: region:10312285-10331936:-1
so has part: feature:10312285-10331936:-1:exon

123457067
type: Gene
SIO_000068: ncbigene

position:10312285:-1
position: 10312285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10331936:-1
position: 10331936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10312285-10331936:-1:exon

LOC123457067
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457067
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 20% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457067
subclass of: SO_0000673
so part of: LOC123457067
location: complement(10312285..10312342)
location: region:10312285-10312342:-1
so has part: feature:10312285-10312342:-1:exon

position:10312342:-1
position: 10312342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10312285-10312342:-1:exon

LOC123457067
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457067
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 20% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457067
subclass of: SO_0000673
so part of: LOC123457067
location: complement(10321943..10322105)
location: region:10321943-10322105:-1
so has part: feature:10321943-10322105:-1:exon

position:10321943:-1
position: 10321943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10322105:-1
position: 10322105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10321943-10322105:-1:exon

LOC123457067
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457067
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 20% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457067
subclass of: SO_0000673
so part of: LOC123457067
location: complement(10322254..10322324)
location: region:10322254-10322324:-1
so has part: feature:10322254-10322324:-1:exon

position:10322254:-1
position: 10322254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10322324:-1
position: 10322324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10322254-10322324:-1:exon

LOC123457067
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457067
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 20% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457067
subclass of: SO_0000673
so part of: LOC123457067
location: complement(10331355..10331869)
location: region:10331355-10331869:-1
so has part: feature:10331355-10331869:-1:exon

position:10331355:-1
position: 10331355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10331869:-1
position: 10331869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10331355-10331869:-1:exon

LOC123457067
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457067
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 20% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457067
subclass of: SO_0000673
so part of: LOC123457067
location: complement(10331904..10331936)
location: region:10331904-10331936:-1
so has part: feature:10331904-10331936:-1:exon

position:10331904:-1
position: 10331904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10331904-10331936:-1:exon

LOC123457107
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457107
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 10376342..10376446
location: region:10376342-10376446:1
so has part: feature:10376342-10376446:1:exon
subclass of: SO_0000623

123457107
type: Gene
SIO_000068: ncbigene

position:10376342:1
position: 10376342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10376446:1
position: 10376446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10376342-10376446:1:exon

LOC123457107
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457107
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634885.1
SIO_010081: LOC123457107
subclass of: SO_0000673
so part of: LOC123457107
location: 10376342..10376446
location: region:10376342-10376446:1
so has part: feature:10376342-10376446:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10376342-10376446:1:exon

LOC123457068
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457068
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(10400075..10400660)
location: region:10400075-10400660:-1
so has part: feature:10400075-10400660:-1:exon

123457068
type: Gene
SIO_000068: ncbigene

position:10400075:-1
position: 10400075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10400660:-1
position: 10400660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10400075-10400660:-1:exon

LOC123457068
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457068
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 32% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457068
subclass of: SO_0000673
so part of: LOC123457068
location: complement(10400075..10400593)
location: region:10400075-10400593:-1
so has part: feature:10400075-10400593:-1:exon

position:10400593:-1
position: 10400593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10400075-10400593:-1:exon

LOC123457068
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457068
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 32% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123457068
subclass of: SO_0000673
so part of: LOC123457068
location: complement(10400628..10400660)
location: region:10400628-10400660:-1
so has part: feature:10400628-10400660:-1:exon

position:10400628:-1
position: 10400628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10400628-10400660:-1:exon

LOC123457076
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(10408555..10410079)
location: region:10408555-10410079:-1
so has part: feature:10408555-10410079:-1:exon

123457076
type: Gene
SIO_000068: ncbigene

position:10408555:-1
position: 10408555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10410079:-1
position: 10410079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10408555-10410079:-1:exon

LOC123457076
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457076
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC123457076
subclass of: SO_0000673
so part of: LOC123457076
location: complement(10408555..10409613)
location: region:10408555-10409613:-1
so has part: feature:10408555-10409613:-1:exon

position:10409613:-1
position: 10409613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10408555-10409613:-1:exon

LOC123457076
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457076
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC123457076
subclass of: SO_0000673
so part of: LOC123457076
location: complement(10409810..10410079)
location: region:10409810-10410079:-1
so has part: feature:10409810-10410079:-1:exon

position:10409810:-1
position: 10409810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10409810-10410079:-1:exon

LOC123457035
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 10449270..10449624
location: region:10449270-10449624:1
so has part: feature:10449270-10449624:1:exon

123457035
type: Gene
SIO_000068: ncbigene

position:10449270:1
position: 10449270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10449624:1
position: 10449624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10449270-10449624:1:exon

LOC123457035
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457035
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC123457035
subclass of: SO_0000673
so part of: LOC123457035
location: 10449270..10449624
location: region:10449270-10449624:1
so has part: feature:10449270-10449624:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10449270-10449624:1:exon

LOC101611961
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC101611961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 10567378..10567732
location: region:10567378-10567732:1
so has part: feature:10567378-10567732:1:exon

101611961
type: Gene
SIO_000068: ncbigene

position:10567378:1
position: 10567378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10567732:1
position: 10567732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10567378-10567732:1:exon

LOC101611961
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC101611961
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC101611961
subclass of: SO_0000673
so part of: LOC101611961
location: 10567378..10567732
location: region:10567378-10567732:1
so has part: feature:10567378-10567732:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10567378-10567732:1:exon

LOC123457104
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457104
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 10605146..10605255
location: region:10605146-10605255:1
so has part: feature:10605146-10605255:1:exon
subclass of: SO_0000623

123457104
type: Gene
SIO_000068: ncbigene

position:10605146:1
position: 10605146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10605255:1
position: 10605255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10605146-10605255:1:exon

LOC123457104
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457104
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634883.1
SIO_010081: LOC123457104
subclass of: SO_0000673
so part of: LOC123457104
location: 10605146..10605255
location: region:10605146-10605255:1
so has part: feature:10605146-10605255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10605146-10605255:1:exon

LOC123457105
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457105
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(10696330..10696439)
location: region:10696330-10696439:-1
so has part: feature:10696330-10696439:-1:exon
subclass of: SO_0000623

123457105
type: Gene
SIO_000068: ncbigene

position:10696330:-1
position: 10696330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10696439:-1
position: 10696439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10696330-10696439:-1:exon

LOC123457105
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457105
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634884.1
SIO_010081: LOC123457105
subclass of: SO_0000673
so part of: LOC123457105
location: complement(10696330..10696439)
location: region:10696330-10696439:-1
so has part: feature:10696330-10696439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10696330-10696439:-1:exon

LOC123457069
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457069
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10820303..10830579
location: region:10820303-10830579:1
so has part: feature:10820303-10830579:1:exon
subclass of: SO_0000010

123457069
type: Gene
SIO_000068: ncbigene

position:10820303:1
position: 10820303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10830579:1
position: 10830579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10820303-10830579:1:exon

LOC123457069
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457069
product: nuclear ubiquitous casein and cyclin-dependent kinase substrate 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045141157.1
SIO_010081: LOC123457069
subclass of: SO_0000673
so part of: LOC123457069
location: join(10820303..10820395,10829815..10830579)
location: region:10820303-10830579:1
so has part: feature:10820303-10820395:1:exon
so has part: feature:10829815-10830579:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10820303-10820395:1:exon

position:10820395:1
position: 10820395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10829815-10830579:1:exon

position:10829815:1
position: 10829815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123457069
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457069
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear ubiquitous casein and cyclin-dependent kinase substrate 1-like
translation: MSAVSLSPGRCDSDIASSEVHSTVISSHHFAVSLIKSSSGKNSQEDSEDSEEKDVKTKKDDSHSAEDSEDEKDDHKNVRQQWQAASKAASKQREMLLEDVGSEEELEEEDEAPFQEKDSGSDEDFLMEDDDDSDYGSSKQKNKKMVKKSKPDRKEKKMPKPRLKAKVTPSPVKGKGKVGHPTASKVSKEKMPSPKEEEVEPESPPEKKASASPPPEKSGDEGSEDEAQSGED
SIO_010081: LOC123457069
subclass of: SO_0000673
so part of: LOC123457069
location: join(10820303..10820395,10829815..10830420)
location: region:10820303-10830420:1
so has part: feature:10820303-10820395:1:exon
so has part: feature:10829815-10830420:1:exon

XP_044997092.1
type: Protein
SIO_000068: ncbiprotein

position:10830420:1
position: 10830420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10820303-10820395:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10829815-10830420:1:exon

LOC123457127
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457127
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(10860216..10860320)
location: region:10860216-10860320:-1
so has part: feature:10860216-10860320:-1:exon
subclass of: SO_0000623

123457127
type: Gene
SIO_000068: ncbigene

position:10860216:-1
position: 10860216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10860320:-1
position: 10860320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10860216-10860320:-1:exon

LOC123457127
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457127
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634901.1
SIO_010081: LOC123457127
subclass of: SO_0000673
so part of: LOC123457127
location: complement(10860216..10860320)
location: region:10860216-10860320:-1
so has part: feature:10860216-10860320:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10860216-10860320:-1:exon

LOC123457099
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457099
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 10878720..10878824
location: region:10878720-10878824:1
so has part: feature:10878720-10878824:1:exon
subclass of: SO_0000623

123457099
type: Gene
SIO_000068: ncbigene

position:10878720:1
position: 10878720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10878824:1
position: 10878824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10878720-10878824:1:exon

LOC123457099
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457099
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634878.1
SIO_010081: LOC123457099
subclass of: SO_0000673
so part of: LOC123457099
location: 10878720..10878824
location: region:10878720-10878824:1
so has part: feature:10878720-10878824:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10878720-10878824:1:exon

LOC123457117
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457117
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 10936630..10936729
location: region:10936630-10936729:1
so has part: feature:10936630-10936729:1:exon

123457117
type: Gene
SIO_000068: ncbigene

position:10936630:1
position: 10936630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10936729:1
position: 10936729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10936630-10936729:1:exon

LOC123457117
type: Exon
subclass of: SO_0000147
RO_0002162: 51337
gene: LOC123457117
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123457117
subclass of: SO_0000673
so part of: LOC123457117
location: 10936630..10936729
location: region:10936630-10936729:1
so has part: feature:10936630-10936729:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10936630-10936729:1:exon

LOC123457070
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10985689..10996794
location: region:10985689-10996794:1
so has part: feature:10985689-10996794:1:exon
subclass of: SO_0000010

123457070
type: Gene
SIO_000068: ncbigene

position:10985689:1
position: 10985689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10996794:1
position: 10996794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10985689-10996794:1:exon

LOC123457070
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51337
gene: LOC123457070
product: nuclear ubiquitous casein and cyclin-dependent kinase substrate 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045141158.1
SIO_010081: LOC123457070
subclass of: SO_0000673
so part of: LOC123457070
location: join(10985689..10985754,10987118..10987257,10989390..10989460,10989609..10989733,10996189..10996794)
location: region:10985689-10996794:1
so has part: feature:10985689-10985754:1:exon
so has part: feature:10987118-10987257:1:exon
so has part: feature:10989390-10989460:1:exon
so has part: feature:10989609-10989733:1:exon
so has part: feature:10996189-10996794:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10985689-10985754:1:exon

position:10985754:1
position: 10985754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10987118-10987257:1:exon

position:10987118:1
position: 10987118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10987257:1
position: 10987257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10989390-10989460:1:exon

position:10989390:1
position: 10989390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10989460:1
position: 10989460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10989609-10989733:1:exon

position:10989609:1
position: 10989609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10989733:1
position: 10989733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10996189-10996794:1:exon

position:10996189:1
position: 10996189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123457070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51337
gene: LOC123457070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear ubiquitous casein and cyclin-dependent kinase substrate 1-like
translation: MNILLLAAALSCLVGAQQQPLKFSGDFQTLYLASRQLSAVNENGLFRLYFRNISFYDGYKKMSMAFYMRENGACRLYRLQAAKYKPLIFTDIWNRAKGIKPVEKKINNPNGLWLIDNSYDSYPRVWNRQFNNKDVSLIKSSSGKNSQEDSEDSEEKDVKTKKDDSHSAEDREDEKDDHKNMRQQLQAASKAASKQREMLLEDVGSEEELEEEDEAPFQEKYSGSDEDFLMEDDDDSDYGISKQKNKKVVKKSKPDRKEKKMPKPRLKATVTPSPVKGKGKVGRPTASKVSKEKTPSPKEEEEEPESPPEKKASASPPPEKSGDEGSEDEAQSGED
SIO_010081: LOC123457070
subclass of: SO_0000673
so part of: LOC123457070
location: join(10985689..10985754,10987118..10987257,10989390..10989460,10989609..10989733,10996189..10996794)
location: region:10985689-10996794:1
so has part: feature:10985689-10985754:1:exon
so has part: feature:10987118-10987257:1:exon
so has part: feature:10989390-10989460:1:exon
so has part: feature:10989609-10989733:1:exon
so has part: feature:10996189-10996794:1:exon

XP_044997093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10985689-10985754:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10987118-10987257:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10989390-10989460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10989609-10989733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10996189-10996794:1:exon

LOC123457124
type: Gene
subclass of: SO_0000704
RO_0002162: 51337
gene: LOC123457124
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(11035952..11036056)
location: region:11035952-11036056:-1
so has part: feature:11035952-11036056:-1:exon
subclass of: SO_0000623

123457124
type: Gene
SIO_000068: ncbigene

position:11035952:-1
position: 11035952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11036056:-1
position: 11036056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11035952-11036056:-1:exon

LOC123457124
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51337
nc RNA class: snRNA
gene: LOC123457124
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006634898.1
SIO_010081: LOC123457124
subclass of: SO_0000673
so part of: LOC123457124
location: complement(11035952..11036056)
location: region:11035952-11036056:-1
so has part: feature:11035952-11036056:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11035952-11036056:-1:exon