Juglans regia cultivar Chandler chromosome 15, Walnut 2.0, whole genome shotgun sequence.
type: Entry
definition: Juglans regia cultivar Chandler chromosome 15, Walnut 2.0, whole genome shotgun sequence.
sequence version: NC_049915.1
sequence date: 2020-07-29
sequence: sequence
division: CON
label: NC_049915.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA350852
dblink: SAMN03704235
keyword: WGS
keyword: RefSeq
source: Juglans regia (English walnut)
organism: Juglans regia
taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM023855.1.\nAssembly name: Walnut 2.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Johns Hopkins University on\n2020/07/08. The original whole-genome shotgun project has the\naccession LIHL00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Johns Hopkins University\nAssembly Date :: SEP-2018\nAssembly Method :: MaSuRCA v. 3.2.1; HiRise v. 2018-04\nAssembly Name :: Walnut 2.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 155.0x\nSequencing Technology :: Illumina HiSeq; Oxford Nanopore MinION;\n Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Juglans regia Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 20407330
topology: linear
so has quality: SO_0000987
location: 1..20407330
location: region:1-20407330:1
RO_0002162: 51240

NC_049915
type: RefSeq
SIO_000068: refseq

PRJNA350852
type: BioProject
SIO_000068: bioproject

SAMN03704235
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20407330:1
position: 20407330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-20407330:1:source
so part of: sequence
organism: Juglans regia
mol type: genomic DNA
cultivar: Chandler
isolation source: plant at flowering time
chromosome: 15
tissue type: leaves
country: USA: California, Davis

51240
type: Taxonomy
SIO_000068: taxonomy

LOC109002985
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10547..11939)
location: region:10547-11939:-1
so has part: feature:10547-11939:-1:exon
subclass of: SO_0000010

109002985
type: Gene
SIO_000068: ncbigene

position:10547:-1
position: 10547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11939:-1
position: 11939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10547-11939:-1:exon

LOC109002985
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002985
product: ferredoxin-thioredoxin reductase, variable chain, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_018980926.1
SIO_010081: LOC109002985
subclass of: SO_0000673
so part of: LOC109002985
location: complement(join(10547..10829,11266..11939))
location: region:10547-11939:-1
so has part: feature:11266-11939:-1:exon
so has part: feature:10547-10829:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11266-11939:-1:exon

position:11266:-1
position: 11266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10547-10829:-1:exon

position:10829:-1
position: 10829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ferredoxin-thioredoxin reductase, variable chain, chloroplastic
translation: MTGPTPITAVSLLSPPAAPISSRSLSSLPSTVHTTGRTGNHCTKPATTTNMKSSTPWCSSMNVTSLAVSAAVSPGITAPQHLNIRRRKRTISCEISLESDSTTVTRASSEEAKIGARVRVKVPLKVHHVPRLPEVDLTGMEGELKQYVGLWKGRRISANLPYKVEFLTEIQGRGPVKFFAHLKEDEFEYL
SIO_010081: LOC109002985
subclass of: SO_0000673
so part of: LOC109002985
location: complement(11280..11852)
location: region:11280-11852:-1
so has part: feature:11280-11852:-1:exon

XP_018836471.1
type: Protein
SIO_000068: ncbiprotein

position:11280:-1
position: 11280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11852:-1
position: 11852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11280-11852:-1:exon

LOC109002975
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(14310..33715)
location: region:14310-33715:-1
so has part: feature:14310-33715:-1:exon
subclass of: SO_0000010

109002975
type: Gene
SIO_000068: ncbigene

position:14310:-1
position: 14310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33715:-1
position: 33715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14310-33715:-1:exon

LOC109002975
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002975
product: sphingoid long-chain bases kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_018980914.2
SIO_010081: LOC109002975
subclass of: SO_0000673
so part of: LOC109002975
location: complement(join(14310..14703,15137..16077,17763..17862,19916..20062,27912..27949,28073..28166,32144..32515,32630..33316,33558..33715))
location: region:14310-33715:-1
so has part: feature:33558-33715:-1:exon
so has part: feature:32630-33316:-1:exon
so has part: feature:32144-32515:-1:exon
so has part: feature:28073-28166:-1:exon
so has part: feature:27912-27949:-1:exon
so has part: feature:19916-20062:-1:exon
so has part: feature:17763-17862:-1:exon
so has part: feature:15137-16077:-1:exon
so has part: feature:14310-14703:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33558-33715:-1:exon

position:33558:-1
position: 33558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:32630-33316:-1:exon

position:32630:-1
position: 32630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33316:-1
position: 33316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:32144-32515:-1:exon

position:32144:-1
position: 32144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32515:-1
position: 32515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:28073-28166:-1:exon

position:28073:-1
position: 28073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28166:-1
position: 28166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:27912-27949:-1:exon

position:27912:-1
position: 27912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27949:-1
position: 27949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:19916-20062:-1:exon

position:19916:-1
position: 19916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20062:-1
position: 20062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:17763-17862:-1:exon

position:17763:-1
position: 17763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17862:-1
position: 17862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:15137-16077:-1:exon

position:15137:-1
position: 15137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16077:-1
position: 16077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:14310-14703:-1:exon

position:14703:-1
position: 14703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingoid long-chain bases kinase 1
translation: MQKSASLSRHSNSVNTPSSLRLITPQQSLRRLGLCSQIATGGQHSSPIVFPEKRNKAKASTRRSSEVSAGGTAPAAPADDPDKAKTFEHRIDIGGPAAAGGDEKSDLLGCAVFSGKLVWDKRKTSSENTTHAQQTSTTDITSQEAVDAKLTSRALVWSSHMLNLDDVVSVSYNVGLRHFTVHSYPLKKGSRCLSCLIKPRRSRKDFRFFAPTMEEAVGWVAGFADQQCFVNCLPHPLVSSKKQASSELLPPDTPPELLFKCKNPPKMLVILNPRSGRGRSSKVFHGIVEPIFKLAGFKLEVINTTSAGHARKLASSVDIDTCPDGIICVGGDGIINEVLNGLLTRDNQKEGISIPIGIIPAGSDNSLVWTVLGVRDPVSAAMAIVKGGLTATDVFAIEWIQRGVIHFGMTVSYFGFLSDVLELSEKYQKRFGPLRYFVAGFLKFLCLPKYNYEVEYLPASKEDREGNFTTEREVVDISELYTDIMRRSSKDGIPRASSLSSIDSIMTPSRMSGGDLDTTCSSTHASTEPSEYVRGLDPKAKRLSSGRSNVTAETEVIHPQLPLSTTPNWPRTRSKMRADKGWTGLTATNDTSRCSWTNAATNDKEDISSTLSDPGPIWDSEPKWDIEPNWDVENPIELPGPSDDVETGMRREVMPPCEDKWVFTKGQYLGILVCNHACRTVQSSQVVAPKSEHDDNTMDLLLVHGSGRLRLLRFFILLQLGRHLSLPYVEYVKVKSVKIKPGKHTHNGCGIDGELFPLNEQVISSLLPEQCRLIGRFRSHHV
SIO_010081: LOC109002975
subclass of: SO_0000673
so part of: LOC109002975
location: complement(join(14554..14703,15137..16077,17763..17862,19916..20062,27912..27949,28073..28166,32144..32515,32630..33136))
location: region:14554-33136:-1
so has part: feature:32630-33136:-1:exon
so has part: feature:32144-32515:-1:exon
so has part: feature:28073-28166:-1:exon
so has part: feature:27912-27949:-1:exon
so has part: feature:19916-20062:-1:exon
so has part: feature:17763-17862:-1:exon
so has part: feature:15137-16077:-1:exon
so has part: feature:14554-14703:-1:exon

XP_018836459.1
type: Protein
SIO_000068: ncbiprotein

position:14554:-1
position: 14554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33136:-1
position: 33136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32630-33136:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32144-32515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28073-28166:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27912-27949:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19916-20062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17763-17862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15137-16077:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14554-14703:-1:exon

LOC109002958
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(43948..47680)
location: region:43948-47680:-1
so has part: feature:43948-47680:-1:exon
subclass of: SO_0000010

109002958
type: Gene
SIO_000068: ncbigene

position:43948:-1
position: 43948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47680:-1
position: 47680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43948-47680:-1:exon

LOC109002958
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002958
product: pyruvate kinase, cytosolic isozyme
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 2 long SRA reads, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_018980903.2
SIO_010081: LOC109002958
subclass of: SO_0000673
so part of: LOC109002958
location: complement(join(43948..44804,45356..45817,47304..47570,47663..47680))
location: region:43948-47680:-1
so has part: feature:47663-47680:-1:exon
so has part: feature:47304-47570:-1:exon
so has part: feature:45356-45817:-1:exon
so has part: feature:43948-44804:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47663-47680:-1:exon

position:47663:-1
position: 47663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:47304-47570:-1:exon

position:47304:-1
position: 47304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47570:-1
position: 47570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:45356-45817:-1:exon

position:45356:-1
position: 45356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45817:-1
position: 45817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:43948-44804:-1:exon

position:44804:-1
position: 44804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002958
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate kinase, cytosolic isozyme
translation: MANIDIEGILKELPNDGRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHDYHQETLNNLRIAMHNTQILCAVMLDTKGPEIRTGFLKDSKPIQLKEGQEITVTTDYSIKGDEEMISMSYKKLAEDLKPGNTILCADGTITLNVLSCNADAGTVRCRCQNTAILGERKNVNLPGVVVDLPTLTEKDKEDILQWGVPNKIDMIALSFVRKGSDLVNVRKVLGPHSKNIQLMSKVENQEGVINFDEILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPELAVKIMARICIEAESSLDHGAIFKEMIKSTPLPMSPLESLASSAVRTANKAKAKLIVVMTRGGTTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPLLAQGSAKATDAESTEVILEAALKSATEKGLCKPGDAVVALHRIGAASVIKICVVK
SIO_010081: LOC109002958
subclass of: SO_0000673
so part of: LOC109002958
location: complement(join(43992..44804,45356..45817,47304..47561))
location: region:43992-47561:-1
so has part: feature:47304-47561:-1:exon
so has part: feature:45356-45817:-1:exon
so has part: feature:43992-44804:-1:exon

XP_018836448.1
type: Protein
SIO_000068: ncbiprotein

position:43992:-1
position: 43992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47561:-1
position: 47561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47304-47561:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45356-45817:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:43992-44804:-1:exon

LOC109002871
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(48383..57381)
location: region:48383-57381:-1
so has part: feature:48383-57381:-1:exon
subclass of: SO_0000010

109002871
type: Gene
SIO_000068: ncbigene

position:48383:-1
position: 48383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57381:-1
position: 57381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48383-57381:-1:exon

LOC109002871
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002871
product: WD repeat-containing protein 26 homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_018980817.2
SIO_010081: LOC109002871
subclass of: SO_0000673
so part of: LOC109002871
location: complement(join(48383..48931,49676..50305,54964..55789,56986..57381))
location: region:48383-57381:-1
so has part: feature:56986-57381:-1:exon
so has part: feature:54964-55789:-1:exon
so has part: feature:49676-50305:-1:exon
so has part: feature:48383-48931:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56986-57381:-1:exon

position:56986:-1
position: 56986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:54964-55789:-1:exon

position:54964:-1
position: 54964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55789:-1
position: 55789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:49676-50305:-1:exon

position:49676:-1
position: 49676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50305:-1
position: 50305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:48383-48931:-1:exon

position:48931:-1
position: 48931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002871
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002871
product: WD repeat-containing protein 26 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_018980796.2
SIO_010081: LOC109002871
subclass of: SO_0000673
so part of: LOC109002871
location: complement(join(48383..48931,49676..50305,50590..50691,54964..55789,57126..57379))
location: region:48383-57379:-1
so has part: feature:57126-57379:-1:exon
so has part: feature:54964-55789:-1:exon
so has part: feature:50590-50691:-1:exon
so has part: feature:49676-50305:-1:exon
so has part: feature:48383-48931:-1:exon

position:57379:-1
position: 57379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57126-57379:-1:exon

position:57126:-1
position: 57126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:54964-55789:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50590-50691:-1:exon

position:50590:-1
position: 50590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50691:-1
position: 50691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:49676-50305:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48383-48931:-1:exon

LOC109002871
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002871
product: WD repeat-containing protein 26 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_018980791.2
SIO_010081: LOC109002871
subclass of: SO_0000673
so part of: LOC109002871
location: complement(join(48383..48931,49676..50305,50590..50691,54964..55789,56986..57379))
location: region:48383-57379:-1
so has part: feature:56986-57379:-1:exon
so has part: feature:54964-55789:-1:exon
so has part: feature:50590-50691:-1:exon
so has part: feature:49676-50305:-1:exon
so has part: feature:48383-48931:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56986-57379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54964-55789:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50590-50691:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49676-50305:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48383-48931:-1:exon

LOC109002871
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002871
product: WD repeat-containing protein 26 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_018980811.2
SIO_010081: LOC109002871
subclass of: SO_0000673
so part of: LOC109002871
location: complement(join(48383..48931,49676..50305,50590..50691,54964..55789,56494..56967))
location: region:48383-56967:-1
so has part: feature:56494-56967:-1:exon
so has part: feature:54964-55789:-1:exon
so has part: feature:50590-50691:-1:exon
so has part: feature:49676-50305:-1:exon
so has part: feature:48383-48931:-1:exon

position:56967:-1
position: 56967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56494-56967:-1:exon

position:56494:-1
position: 56494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:54964-55789:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50590-50691:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49676-50305:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48383-48931:-1:exon

LOC109002871
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 26 homolog isoform X2
translation: MGGIEDNEPPLKRTKIRLAESNSLLEDLSHMQPVACSMGYSMARPLPSHGDEETIGSKGIIKRAEFIKIITRALYSLGYDKSGALLEEESGITLHSSVFNLLMQRVNDGKWNECVAMLHTIGVLDEKTVKSASFLILEQKFLELLKMEKVTDALDTLRNEIVPLCVNVSRVHELATCIVSPSQYVRLGLSSQDTDVVKSRSNILEKLQKVLPAAVMTPEKRLEHLVEQALDVQRDACIFHNTLDSDLSLYSDHQCGKNQIPSQTIQVKEDGHVSLKHKLTGHQKPVLMVSWGPDDRQLLTCGLEEVIKRWDVISGECLLVYEKNGVGLISCGWFPDGRGIFSGMTDKSICLWDLDGRELECWKGQQTLRISDMAVTDDGKRIISICRETSILLLDREAKFERLIEEEEAITSFSLSKDSKFLLVNLINQEIHLWSIEGDLKVVAKYKGHKRARFVIRSCLGGFEQAFIASGSEDSQVYIWHRGSEELLLALLGHSGAVNCVSWNPTNLHMLASASDDHTIRIWGLDELNLIRRDSQSNGITCCSNGRI
SIO_010081: LOC109002871
subclass of: SO_0000673
so part of: LOC109002871
location: complement(join(48713..48931,49676..50305,54964..55761))
location: region:48713-55761:-1
so has part: feature:54964-55761:-1:exon
so has part: feature:49676-50305:-1:exon
so has part: feature:48713-48931:-1:exon

XP_018836362.2
type: Protein
SIO_000068: ncbiprotein

position:48713:-1
position: 48713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55761:-1
position: 55761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54964-55761:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49676-50305:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48713-48931:-1:exon

LOC109002871
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 26 homolog isoform X1
translation: MGGIEDNEPPLKRTKIRLAESNSLLEDLSHMQPVACSMGYSMARPLPSHGDEETIGSKGIIKRAEFIKIITRALYSLGYDKSGALLEEESGITLHSSVFNLLMQRVNDGKWNECVAMLHTIGVLDEKTVKSASFLILEQKFLELLKMEKVTDALDTLRNEIVPLCVNVSRVHELATCIVSPSQYVRLGLSSQDTDVVKSRSNILEKLQKVLPAAVMTPEKRLEHLVEQALDVQRDACIFHNTLDSDLSLYSDHQCGKNQIPSQTIQILQEHTDEVWFLEFSHAGKYLASSSKDQSAIIWEVKEDGHVSLKHKLTGHQKPVLMVSWGPDDRQLLTCGLEEVIKRWDVISGECLLVYEKNGVGLISCGWFPDGRGIFSGMTDKSICLWDLDGRELECWKGQQTLRISDMAVTDDGKRIISICRETSILLLDREAKFERLIEEEEAITSFSLSKDSKFLLVNLINQEIHLWSIEGDLKVVAKYKGHKRARFVIRSCLGGFEQAFIASGSEDSQVYIWHRGSEELLLALLGHSGAVNCVSWNPTNLHMLASASDDHTIRIWGLDELNLIRRDSQSNGITCCSNGRI
SIO_010081: LOC109002871
subclass of: SO_0000673
so part of: LOC109002871
location: complement(join(48713..48931,49676..50305,50590..50691,54964..55761))
location: region:48713-55761:-1
so has part: feature:54964-55761:-1:exon
so has part: feature:50590-50691:-1:exon
so has part: feature:49676-50305:-1:exon
so has part: feature:48713-48931:-1:exon

XP_018836336.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54964-55761:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50590-50691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49676-50305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48713-48931:-1:exon

LOC109002871
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 26 homolog isoform X1
translation: MGGIEDNEPPLKRTKIRLAESNSLLEDLSHMQPVACSMGYSMARPLPSHGDEETIGSKGIIKRAEFIKIITRALYSLGYDKSGALLEEESGITLHSSVFNLLMQRVNDGKWNECVAMLHTIGVLDEKTVKSASFLILEQKFLELLKMEKVTDALDTLRNEIVPLCVNVSRVHELATCIVSPSQYVRLGLSSQDTDVVKSRSNILEKLQKVLPAAVMTPEKRLEHLVEQALDVQRDACIFHNTLDSDLSLYSDHQCGKNQIPSQTIQILQEHTDEVWFLEFSHAGKYLASSSKDQSAIIWEVKEDGHVSLKHKLTGHQKPVLMVSWGPDDRQLLTCGLEEVIKRWDVISGECLLVYEKNGVGLISCGWFPDGRGIFSGMTDKSICLWDLDGRELECWKGQQTLRISDMAVTDDGKRIISICRETSILLLDREAKFERLIEEEEAITSFSLSKDSKFLLVNLINQEIHLWSIEGDLKVVAKYKGHKRARFVIRSCLGGFEQAFIASGSEDSQVYIWHRGSEELLLALLGHSGAVNCVSWNPTNLHMLASASDDHTIRIWGLDELNLIRRDSQSNGITCCSNGRI
SIO_010081: LOC109002871
subclass of: SO_0000673
so part of: LOC109002871
location: complement(join(48713..48931,49676..50305,50590..50691,54964..55761))
location: region:48713-55761:-1
so has part: feature:54964-55761:-1:exon
so has part: feature:50590-50691:-1:exon
so has part: feature:49676-50305:-1:exon
so has part: feature:48713-48931:-1:exon

XP_018836341.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54964-55761:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50590-50691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49676-50305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48713-48931:-1:exon

LOC109002871
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 26 homolog isoform X1
translation: MGGIEDNEPPLKRTKIRLAESNSLLEDLSHMQPVACSMGYSMARPLPSHGDEETIGSKGIIKRAEFIKIITRALYSLGYDKSGALLEEESGITLHSSVFNLLMQRVNDGKWNECVAMLHTIGVLDEKTVKSASFLILEQKFLELLKMEKVTDALDTLRNEIVPLCVNVSRVHELATCIVSPSQYVRLGLSSQDTDVVKSRSNILEKLQKVLPAAVMTPEKRLEHLVEQALDVQRDACIFHNTLDSDLSLYSDHQCGKNQIPSQTIQILQEHTDEVWFLEFSHAGKYLASSSKDQSAIIWEVKEDGHVSLKHKLTGHQKPVLMVSWGPDDRQLLTCGLEEVIKRWDVISGECLLVYEKNGVGLISCGWFPDGRGIFSGMTDKSICLWDLDGRELECWKGQQTLRISDMAVTDDGKRIISICRETSILLLDREAKFERLIEEEEAITSFSLSKDSKFLLVNLINQEIHLWSIEGDLKVVAKYKGHKRARFVIRSCLGGFEQAFIASGSEDSQVYIWHRGSEELLLALLGHSGAVNCVSWNPTNLHMLASASDDHTIRIWGLDELNLIRRDSQSNGITCCSNGRI
SIO_010081: LOC109002871
subclass of: SO_0000673
so part of: LOC109002871
location: complement(join(48713..48931,49676..50305,50590..50691,54964..55761))
location: region:48713-55761:-1
so has part: feature:54964-55761:-1:exon
so has part: feature:50590-50691:-1:exon
so has part: feature:49676-50305:-1:exon
so has part: feature:48713-48931:-1:exon

XP_018836356.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54964-55761:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50590-50691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49676-50305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48713-48931:-1:exon

LOC109002903
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(58578..62170)
location: region:58578-62170:-1
so has part: feature:58578-62170:-1:exon
subclass of: SO_0000010

109002903
type: Gene
SIO_000068: ncbigene

position:58578:-1
position: 58578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62170:-1
position: 62170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58578-62170:-1:exon

LOC109002903
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002903
product: uncharacterized LOC109002903, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 long SRA reads, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_018980828.2
SIO_010081: LOC109002903
subclass of: SO_0000673
so part of: LOC109002903
location: complement(join(58578..58937,59020..59081,59689..59786,60969..61146,61422..61523,61606..62170))
location: region:58578-62170:-1
so has part: feature:61606-62170:-1:exon
so has part: feature:61422-61523:-1:exon
so has part: feature:60969-61146:-1:exon
so has part: feature:59689-59786:-1:exon
so has part: feature:59020-59081:-1:exon
so has part: feature:58578-58937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61606-62170:-1:exon

position:61606:-1
position: 61606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:61422-61523:-1:exon

position:61422:-1
position: 61422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61523:-1
position: 61523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:60969-61146:-1:exon

position:60969:-1
position: 60969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61146:-1
position: 61146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:59689-59786:-1:exon

position:59689:-1
position: 59689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59786:-1
position: 59786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:59020-59081:-1:exon

position:59020:-1
position: 59020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59081:-1
position: 59081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:58578-58937:-1:exon

position:58937:-1
position: 58937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002903
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109002903 isoform X1
translation: MAMAAAACTCSYASQLLPRSKFSTFAFPSSSVSCTAPSVIQIPCLRTIHRNPSTRLAAAKKDLNAVPQEQGKKQKKEQVVEEEEDLPWIQDKALDLVEFTGSVAQSVPGPRVGSSSLPWILALPLAYAGLTFVIAFVKTVRKFTSPREKRRRLVNKNVMLCKSIDEVFLEGRDNETLDDALKRLEKKTGFGMEEILRKYIRYALNEKPFNPDLISNLIELRKASMLDDSQVTEILNEISRRIVRDKGPVVLDMSGYSEKGFKRKLAVQALFGKVFYLSELPDFCSRDSSLVIKEIFGVTDEDADKLRIHTLSEAGDMDSLEKMVDGSDSEDSSGPSSYAA
SIO_010081: LOC109002903
subclass of: SO_0000673
so part of: LOC109002903
location: complement(join(58814..58937,59020..59081,59689..59786,60969..61146,61422..61523,61606..62064))
location: region:58814-62064:-1
so has part: feature:61606-62064:-1:exon
so has part: feature:61422-61523:-1:exon
so has part: feature:60969-61146:-1:exon
so has part: feature:59689-59786:-1:exon
so has part: feature:59020-59081:-1:exon
so has part: feature:58814-58937:-1:exon

XP_018836373.1
type: Protein
SIO_000068: ncbiprotein

position:58814:-1
position: 58814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62064:-1
position: 62064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61606-62064:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61422-61523:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60969-61146:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59689-59786:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59020-59081:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58814-58937:-1:exon

LOC109002903
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002903
product: uncharacterized LOC109002903, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_018980836.2
SIO_010081: LOC109002903
subclass of: SO_0000673
so part of: LOC109002903
location: complement(join(59214..59547,59689..59786,60969..61146,61422..61523,61606..62154))
location: region:59214-62154:-1
so has part: feature:61606-62154:-1:exon
so has part: feature:61422-61523:-1:exon
so has part: feature:60969-61146:-1:exon
so has part: feature:59689-59786:-1:exon
so has part: feature:59214-59547:-1:exon

position:59214:-1
position: 59214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62154:-1
position: 62154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61606-62154:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61422-61523:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60969-61146:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59689-59786:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59214-59547:-1:exon

position:59547:-1
position: 59547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002903
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109002903 isoform X2
translation: MAMAAAACTCSYASQLLPRSKFSTFAFPSSSVSCTAPSVIQIPCLRTIHRNPSTRLAAAKKDLNAVPQEQGKKQKKEQVVEEEEDLPWIQDKALDLVEFTGSVAQSVPGPRVGSSSLPWILALPLAYAGLTFVIAFVKTVRKFTSPREKRRRLVNKNVMLCKSIDEVFLEGRDNETLDDALKRLEKKTGFGMEEILRKYIRYALNEKPFNPDLISNLIELRKASMLDDSQVTEILNEISRRIVRDKGPVVLDMSGYSEKGFKRKLAVQALFGKVFYLSELLNLPQAALLHGWKDQ
SIO_010081: LOC109002903
subclass of: SO_0000673
so part of: LOC109002903
location: complement(join(59497..59547,59689..59786,60969..61146,61422..61523,61606..62064))
location: region:59497-62064:-1
so has part: feature:61606-62064:-1:exon
so has part: feature:61422-61523:-1:exon
so has part: feature:60969-61146:-1:exon
so has part: feature:59689-59786:-1:exon
so has part: feature:59497-59547:-1:exon

XP_018836381.1
type: Protein
SIO_000068: ncbiprotein

position:59497:-1
position: 59497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61606-62064:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61422-61523:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60969-61146:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59689-59786:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59497-59547:-1:exon

LOC109002928
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(66053..76394)
location: region:66053-76394:-1
so has part: feature:66053-76394:-1:exon
subclass of: SO_0000010

109002928
type: Gene
SIO_000068: ncbigene

position:66053:-1
position: 66053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76394:-1
position: 76394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66053-76394:-1:exon

LOC109002928
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002928
product: mitochondrial intermembrane space import and assembly protein 40 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_018980857.2
SIO_010081: LOC109002928
subclass of: SO_0000673
so part of: LOC109002928
location: complement(join(66053..66376,67944..68069,68147..68178,76204..76394))
location: region:66053-76394:-1
so has part: feature:76204-76394:-1:exon
so has part: feature:68147-68178:-1:exon
so has part: feature:67944-68069:-1:exon
so has part: feature:66053-66376:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:76204-76394:-1:exon

position:76204:-1
position: 76204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:68147-68178:-1:exon

position:68147:-1
position: 68147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68178:-1
position: 68178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:67944-68069:-1:exon

position:67944:-1
position: 67944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68069:-1
position: 68069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:66053-66376:-1:exon

position:66376:-1
position: 66376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002928
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial intermembrane space import and assembly protein 40 homolog
translation: MGQVQSDVAAAVDEGEQFSPATLADAQATPPPPSMESLIAEAASYGNNESESLDAKAQKALECPCIADLRNGQCGVQFSEAFFCYLKSTAEEKGSDCVHPFVTLQNCIKANPNAFSKGILEEGKVKEEEEPTQEYIRLPLWSRESKSSKSKL
SIO_010081: LOC109002928
subclass of: SO_0000673
so part of: LOC109002928
location: complement(join(66197..66376,67944..68069,68147..68178,76204..76324))
location: region:66197-76324:-1
so has part: feature:76204-76324:-1:exon
so has part: feature:68147-68178:-1:exon
so has part: feature:67944-68069:-1:exon
so has part: feature:66197-66376:-1:exon

XP_018836402.1
type: Protein
SIO_000068: ncbiprotein

position:66197:-1
position: 66197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76324:-1
position: 76324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76204-76324:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:68147-68178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:67944-68069:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:66197-66376:-1:exon

LOC109002863
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002863
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 76550..83986
location: region:76550-83986:1
so has part: feature:76550-83986:1:exon
subclass of: SO_0000010

109002863
type: Gene
SIO_000068: ncbigene

position:76550:1
position: 76550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83986:1
position: 83986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76550-83986:1:exon

LOC109002863
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002863
product: uncharacterized LOC109002863
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_018980780.2
SIO_010081: LOC109002863
subclass of: SO_0000673
so part of: LOC109002863
location: join(76550..76872,77747..77981,78124..78210,78314..78483,79053..79192,79692..79869,79967..80588,81661..81773,81926..82169,83485..83986)
location: region:76550-83986:1
so has part: feature:76550-76872:1:exon
so has part: feature:77747-77981:1:exon
so has part: feature:78124-78210:1:exon
so has part: feature:78314-78483:1:exon
so has part: feature:79053-79192:1:exon
so has part: feature:79692-79869:1:exon
so has part: feature:79967-80588:1:exon
so has part: feature:81661-81773:1:exon
so has part: feature:81926-82169:1:exon
so has part: feature:83485-83986:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:76550-76872:1:exon

position:76872:1
position: 76872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:77747-77981:1:exon

position:77747:1
position: 77747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77981:1
position: 77981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:78124-78210:1:exon

position:78124:1
position: 78124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78210:1
position: 78210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:78314-78483:1:exon

position:78314:1
position: 78314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78483:1
position: 78483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:79053-79192:1:exon

position:79053:1
position: 79053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79192:1
position: 79192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:79692-79869:1:exon

position:79692:1
position: 79692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79869:1
position: 79869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:79967-80588:1:exon

position:79967:1
position: 79967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80588:1
position: 80588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:81661-81773:1:exon

position:81661:1
position: 81661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81773:1
position: 81773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:81926-82169:1:exon

position:81926:1
position: 81926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82169:1
position: 82169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:83485-83986:1:exon

position:83485:1
position: 83485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109002863
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002863
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109002863
translation: MENANAKVVGILENLMISHSSVFNRKKSNDSPPDSPDPIPQLSALANSVVFRCSKILQVPTEDLQHCFETELPESVQNILTYARHFLEFCSYQALNLLIKSPDYLSDKEFRHLTYDMMLAWEAPNIESETPDKENASCSNEEVESDDGWSLFYSNSTTMAIQVDEKKTVGREAFARIAPVCAVVADIITVHNLFDALTSSSGHRLHFLVYDKYIRSLDKIIKSAKNAFASSIGNLQLSEGEIVIDVDGTAPTQPVLQHVGISAWPGRLTLTNNALYFESLGVGLYDQAIRYDLATDMKQVIKPELTGPLGARLFDKAVMYKSTSIAEPVYLEFPEFKGNSRRDYWLDVCLEILHAHRFIRKHNFKGIQKSEVLAKAIIGILRFRAVREASNFSASHYKTLLAFNLAESLPGGDTILETLSCRLALLNVGATQHDGTGTTFAKRRSTLSPTKWQPTLSPVSLLTLDRLGFTLQKEANLDGEVVMVGEVCVGEINPLEMAVKQSVLETGRAEAAQATVDQVKVEGIDTNVAVMKELLFPVIESARQLQLLASWEDPTKSTVFLVLTGYSILRGWIRYMLPAIFFIMSILMLWRKHFNRGKTLETFRVTPPPNRNAVEQLLALQEAITQVEALIQAGNIILLKIRALLFAIPPQATDKVALLMVFMAAAFAFVPLRYIVLLVFLEFFTREMPYRKESSDRWVRRVKEWWVKIPAAPVQLLKVDDYKKKK
SIO_010081: LOC109002863
subclass of: SO_0000673
so part of: LOC109002863
location: join(76709..76872,77747..77981,78124..78210,78314..78483,79053..79192,79692..79869,79967..80588,81661..81773,81926..82169,83485..83712)
location: region:76709-83712:1
so has part: feature:76709-76872:1:exon
so has part: feature:77747-77981:1:exon
so has part: feature:78124-78210:1:exon
so has part: feature:78314-78483:1:exon
so has part: feature:79053-79192:1:exon
so has part: feature:79692-79869:1:exon
so has part: feature:79967-80588:1:exon
so has part: feature:81661-81773:1:exon
so has part: feature:81926-82169:1:exon
so has part: feature:83485-83712:1:exon

XP_018836325.1
type: Protein
SIO_000068: ncbiprotein

position:76709:1
position: 76709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83712:1
position: 83712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76709-76872:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77747-77981:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78124-78210:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78314-78483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:79053-79192:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:79692-79869:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:79967-80588:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:81661-81773:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:81926-82169:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83485-83712:1:exon

LOC109002937
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(84122..88762)
location: region:84122-88762:-1
so has part: feature:84122-88762:-1:exon
subclass of: SO_0000010

109002937
type: Gene
SIO_000068: ncbigene

position:84122:-1
position: 84122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88762:-1
position: 88762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84122-88762:-1:exon

LOC109002937
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002937
product: G patch domain and ankyrin repeat-containing protein 1 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_018980877.2
SIO_010081: LOC109002937
subclass of: SO_0000673
so part of: LOC109002937
location: complement(join(84122..84474,86421..86543,88350..88403,88567..88762))
location: region:84122-88762:-1
so has part: feature:88567-88762:-1:exon
so has part: feature:88350-88403:-1:exon
so has part: feature:86421-86543:-1:exon
so has part: feature:84122-84474:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88567-88762:-1:exon

position:88567:-1
position: 88567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88350-88403:-1:exon

position:88350:-1
position: 88350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88403:-1
position: 88403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:86421-86543:-1:exon

position:86421:-1
position: 86421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86543:-1
position: 86543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:84122-84474:-1:exon

position:84474:-1
position: 84474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002937
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002937
product: G patch domain and ankyrin repeat-containing protein 1 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_018980868.2
SIO_010081: LOC109002937
subclass of: SO_0000673
so part of: LOC109002937
location: complement(join(84122..84492,86421..86543,88350..88403,88567..88739))
location: region:84122-88739:-1
so has part: feature:88567-88739:-1:exon
so has part: feature:88350-88403:-1:exon
so has part: feature:86421-86543:-1:exon
so has part: feature:84122-84492:-1:exon

position:88739:-1
position: 88739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88567-88739:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88350-88403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:86421-86543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84122-84492:-1:exon

position:84492:-1
position: 84492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002937
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X2
translation: MAMGGDSSSKDGSSIDSSNIGFLLLKKHGWKEGTGLGASEQGRLEPVQAYLKNNKRGLGADKVKMVAKKSYVTAASNEKNDQKCKTLSKRMRKMQELEKQLQEKEFERAFYREFWPDNV
SIO_010081: LOC109002937
subclass of: SO_0000673
so part of: LOC109002937
location: complement(join(84361..84474,86421..86543,88350..88403,88567..88635))
location: region:84361-88635:-1
so has part: feature:88567-88635:-1:exon
so has part: feature:88350-88403:-1:exon
so has part: feature:86421-86543:-1:exon
so has part: feature:84361-84474:-1:exon

XP_018836422.1
type: Protein
SIO_000068: ncbiprotein

position:84361:-1
position: 84361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88635:-1
position: 88635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88567-88635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88350-88403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:86421-86543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84361-84474:-1:exon

LOC109002937
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X1
translation: MAMGGDSSSKDGSSIDSSNIGFLLLKKHGWKEGTGLGASEQGRLEPVQAYLKNNKRGLGADKVKMVAKKSYVTAASNEKNDQDHLPLKKCKTLSKRMRKMQELEKQLQEKEFERAFYREFWPDNV
SIO_010081: LOC109002937
subclass of: SO_0000673
so part of: LOC109002937
location: complement(join(84361..84492,86421..86543,88350..88403,88567..88635))
location: region:84361-88635:-1
so has part: feature:88567-88635:-1:exon
so has part: feature:88350-88403:-1:exon
so has part: feature:86421-86543:-1:exon
so has part: feature:84361-84492:-1:exon

XP_018836413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88567-88635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88350-88403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:86421-86543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84361-84492:-1:exon

LOC109002920
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 92204..121693
location: region:92204-121693:1
so has part: feature:92204-121693:1:exon
subclass of: SO_0000010

109002920
type: Gene
SIO_000068: ncbigene

position:92204:1
position: 92204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121693:1
position: 121693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92204-121693:1:exon

LOC109002920
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002920
product: phytochrome-associated serine/threonine-protein phosphatase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 long SRA reads, 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_018980847.2
SIO_010081: LOC109002920
subclass of: SO_0000673
so part of: LOC109002920
location: join(92204..92404,93735..93881,93987..94054,108895..108952,109848..109958,110092..110142,119661..119804,119876..119971,120056..120127,121271..121693)
location: region:92204-121693:1
so has part: feature:92204-92404:1:exon
so has part: feature:93735-93881:1:exon
so has part: feature:93987-94054:1:exon
so has part: feature:108895-108952:1:exon
so has part: feature:109848-109958:1:exon
so has part: feature:110092-110142:1:exon
so has part: feature:119661-119804:1:exon
so has part: feature:119876-119971:1:exon
so has part: feature:120056-120127:1:exon
so has part: feature:121271-121693:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92204-92404:1:exon

position:92404:1
position: 92404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:93735-93881:1:exon

position:93735:1
position: 93735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93881:1
position: 93881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:93987-94054:1:exon

position:93987:1
position: 93987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94054:1
position: 94054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:108895-108952:1:exon

position:108895:1
position: 108895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108952:1
position: 108952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:109848-109958:1:exon

position:109848:1
position: 109848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109958:1
position: 109958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:110092-110142:1:exon

position:110092:1
position: 110092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110142:1
position: 110142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:119661-119804:1:exon

position:119661:1
position: 119661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119804:1
position: 119804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:119876-119971:1:exon

position:119876:1
position: 119876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119971:1
position: 119971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:120056-120127:1:exon

position:120056:1
position: 120056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120127:1
position: 120127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:121271-121693:1:exon

position:121271:1
position: 121271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109002920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phytochrome-associated serine/threonine-protein phosphatase
translation: MDLDQWISKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFSDNMEREVKFFTETEENNQMRGPRTGVPYFL
SIO_010081: LOC109002920
subclass of: SO_0000673
so part of: LOC109002920
location: join(92324..92404,93735..93881,93987..94054,108895..108952,109848..109958,110092..110142,119661..119804,119876..119971,120056..120127,121271..121354)
location: region:92324-121354:1
so has part: feature:92324-92404:1:exon
so has part: feature:93735-93881:1:exon
so has part: feature:93987-94054:1:exon
so has part: feature:108895-108952:1:exon
so has part: feature:109848-109958:1:exon
so has part: feature:110092-110142:1:exon
so has part: feature:119661-119804:1:exon
so has part: feature:119876-119971:1:exon
so has part: feature:120056-120127:1:exon
so has part: feature:121271-121354:1:exon

XP_018836392.1
type: Protein
SIO_000068: ncbiprotein

position:92324:1
position: 92324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121354:1
position: 121354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92324-92404:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93735-93881:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93987-94054:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108895-108952:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109848-109958:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110092-110142:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119661-119804:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:119876-119971:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120056-120127:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:121271-121354:1:exon

LOC109002858
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 123119..125230
location: region:123119-125230:1
so has part: feature:123119-125230:1:exon
subclass of: SO_0000011

109002858
type: Gene
SIO_000068: ncbigene

position:123119:1
position: 123119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125230:1
position: 125230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123119-125230:1:exon

LOC109002858
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51240
nc RNA class: lncRNA
gene: LOC109002858
product: uncharacterized LOC109002858
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XR_001998063.2
SIO_010081: LOC109002858
subclass of: SO_0000673
so part of: LOC109002858
location: join(123119..123481,124547..124588,124666..125230)
location: region:123119-125230:1
so has part: feature:123119-123481:1:exon
so has part: feature:124547-124588:1:exon
so has part: feature:124666-125230:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123119-123481:1:exon

position:123481:1
position: 123481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124547-124588:1:exon

position:124547:1
position: 124547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124588:1
position: 124588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:124666-125230:1:exon

position:124666:1
position: 124666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109002832
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002832
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 126687..134726
location: region:126687-134726:1
so has part: feature:126687-134726:1:exon
subclass of: SO_0000010

109002832
type: Gene
SIO_000068: ncbigene

position:126687:1
position: 126687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134726:1
position: 134726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126687-134726:1:exon

LOC109002832
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002832
product: phytochrome-associated serine/threonine-protein phosphatase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 15 long SRA reads, 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_018980755.2
SIO_010081: LOC109002832
subclass of: SO_0000673
so part of: LOC109002832
location: join(126687..126901,128149..128295,128401..128468,131004..131061,132367..132477,132597..132647,133219..133362,133435..133530,133615..133686,134308..134726)
location: region:126687-134726:1
so has part: feature:126687-126901:1:exon
so has part: feature:128149-128295:1:exon
so has part: feature:128401-128468:1:exon
so has part: feature:131004-131061:1:exon
so has part: feature:132367-132477:1:exon
so has part: feature:132597-132647:1:exon
so has part: feature:133219-133362:1:exon
so has part: feature:133435-133530:1:exon
so has part: feature:133615-133686:1:exon
so has part: feature:134308-134726:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126687-126901:1:exon

position:126901:1
position: 126901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:128149-128295:1:exon

position:128149:1
position: 128149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128295:1
position: 128295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:128401-128468:1:exon

position:128401:1
position: 128401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128468:1
position: 128468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:131004-131061:1:exon

position:131004:1
position: 131004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131061:1
position: 131061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:132367-132477:1:exon

position:132367:1
position: 132367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132477:1
position: 132477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:132597-132647:1:exon

position:132597:1
position: 132597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132647:1
position: 132647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:133219-133362:1:exon

position:133219:1
position: 133219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133362:1
position: 133362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:133435-133530:1:exon

position:133435:1
position: 133435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133530:1
position: 133530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:133615-133686:1:exon

position:133615:1
position: 133615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133686:1
position: 133686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:134308-134726:1:exon

position:134308:1
position: 134308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109002832
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002832
product: phytochrome-associated serine/threonine-protein phosphatase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_018980748.2
SIO_010081: LOC109002832
subclass of: SO_0000673
so part of: LOC109002832
location: join(126701..126901,128149..128295,128401..128468,131004..131061,132253..132276,132367..132477,132597..132647,133219..133362,133435..133530,133615..133686,134308..134726)
location: region:126701-134726:1
so has part: feature:126701-126901:1:exon
so has part: feature:128149-128295:1:exon
so has part: feature:128401-128468:1:exon
so has part: feature:131004-131061:1:exon
so has part: feature:132253-132276:1:exon
so has part: feature:132367-132477:1:exon
so has part: feature:132597-132647:1:exon
so has part: feature:133219-133362:1:exon
so has part: feature:133435-133530:1:exon
so has part: feature:133615-133686:1:exon
so has part: feature:134308-134726:1:exon

position:126701:1
position: 126701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126701-126901:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128149-128295:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128401-128468:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:131004-131061:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132253-132276:1:exon

position:132253:1
position: 132253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132276:1
position: 132276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:132367-132477:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:132597-132647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133219-133362:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133435-133530:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133615-133686:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134308-134726:1:exon

LOC109002832
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002832
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phytochrome-associated serine/threonine-protein phosphatase-like isoform X1
translation: MDLDQWISKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQEGHLAFARVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQMRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNRINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFSDNMEREVKFFTETEENNQMRGPRTGVPYFL
SIO_010081: LOC109002832
subclass of: SO_0000673
so part of: LOC109002832
location: join(126821..126901,128149..128295,128401..128468,131004..131061,132253..132276,132367..132477,132597..132647,133219..133362,133435..133530,133615..133686,134308..134391)
location: region:126821-134391:1
so has part: feature:126821-126901:1:exon
so has part: feature:128149-128295:1:exon
so has part: feature:128401-128468:1:exon
so has part: feature:131004-131061:1:exon
so has part: feature:132253-132276:1:exon
so has part: feature:132367-132477:1:exon
so has part: feature:132597-132647:1:exon
so has part: feature:133219-133362:1:exon
so has part: feature:133435-133530:1:exon
so has part: feature:133615-133686:1:exon
so has part: feature:134308-134391:1:exon

XP_018836293.1
type: Protein
SIO_000068: ncbiprotein

position:126821:1
position: 126821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134391:1
position: 134391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126821-126901:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128149-128295:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128401-128468:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:131004-131061:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132253-132276:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132367-132477:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:132597-132647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133219-133362:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133435-133530:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133615-133686:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134308-134391:1:exon

LOC109002832
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002832
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phytochrome-associated serine/threonine-protein phosphatase-like isoform X2
translation: MDLDQWISKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQMRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNRINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFSDNMEREVKFFTETEENNQMRGPRTGVPYFL
SIO_010081: LOC109002832
subclass of: SO_0000673
so part of: LOC109002832
location: join(126821..126901,128149..128295,128401..128468,131004..131061,132367..132477,132597..132647,133219..133362,133435..133530,133615..133686,134308..134391)
location: region:126821-134391:1
so has part: feature:126821-126901:1:exon
so has part: feature:128149-128295:1:exon
so has part: feature:128401-128468:1:exon
so has part: feature:131004-131061:1:exon
so has part: feature:132367-132477:1:exon
so has part: feature:132597-132647:1:exon
so has part: feature:133219-133362:1:exon
so has part: feature:133435-133530:1:exon
so has part: feature:133615-133686:1:exon
so has part: feature:134308-134391:1:exon

XP_018836300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126821-126901:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128149-128295:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128401-128468:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:131004-131061:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132367-132477:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132597-132647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133219-133362:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133435-133530:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133615-133686:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:134308-134391:1:exon

LOC109002847
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(136488..138320)
location: region:136488-138320:-1
so has part: feature:136488-138320:-1:exon
subclass of: SO_0000010

109002847
type: Gene
SIO_000068: ncbigene

position:136488:-1
position: 136488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138320:-1
position: 138320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136488-138320:-1:exon

LOC109002847
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002847
product: high mobility group B protein 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_018980762.2
SIO_010081: LOC109002847
subclass of: SO_0000673
so part of: LOC109002847
location: complement(join(136488..136781,136894..136980,137068..137112,137198..137255,137397..137513,137598..137649,137778..137860,138072..138320))
location: region:136488-138320:-1
so has part: feature:138072-138320:-1:exon
so has part: feature:137778-137860:-1:exon
so has part: feature:137598-137649:-1:exon
so has part: feature:137397-137513:-1:exon
so has part: feature:137198-137255:-1:exon
so has part: feature:137068-137112:-1:exon
so has part: feature:136894-136980:-1:exon
so has part: feature:136488-136781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138072-138320:-1:exon

position:138072:-1
position: 138072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:137778-137860:-1:exon

position:137778:-1
position: 137778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137860:-1
position: 137860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:137598-137649:-1:exon

position:137598:-1
position: 137598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137649:-1
position: 137649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:137397-137513:-1:exon

position:137397:-1
position: 137397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137513:-1
position: 137513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:137198-137255:-1:exon

position:137198:-1
position: 137198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137255:-1
position: 137255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:137068-137112:-1:exon

position:137068:-1
position: 137068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137112:-1
position: 137112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:136894-136980:-1:exon

position:136894:-1
position: 136894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136980:-1
position: 136980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:136488-136781:-1:exon

position:136781:-1
position: 136781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002847
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group B protein 7
translation: MATTGGVKGRKRVEASSEPQTATSSLLRAKDGSAFARCEECNKNVPVALISMHSCSLEAKIKLNLEAQVVEMSTESKKKPADRKKLGTTGPKAKKAKTEKKVKKGKDPNMPKRPPTAFFLFMDDFRKAYKEAHPDSKDVKVVAKEGGEKWRNLTEEEKKVYQDKASDLKTEYEKALESHNAEDEDGDGGSEKEVEGASDGE
SIO_010081: LOC109002847
subclass of: SO_0000673
so part of: LOC109002847
location: complement(join(136731..136781,136894..136980,137068..137112,137198..137255,137397..137513,137598..137649,137778..137860,138072..138184))
location: region:136731-138184:-1
so has part: feature:138072-138184:-1:exon
so has part: feature:137778-137860:-1:exon
so has part: feature:137598-137649:-1:exon
so has part: feature:137397-137513:-1:exon
so has part: feature:137198-137255:-1:exon
so has part: feature:137068-137112:-1:exon
so has part: feature:136894-136980:-1:exon
so has part: feature:136731-136781:-1:exon

XP_018836307.1
type: Protein
SIO_000068: ncbiprotein

position:136731:-1
position: 136731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138184:-1
position: 138184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138072-138184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137778-137860:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:137598-137649:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:137397-137513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:137198-137255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:137068-137112:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:136894-136980:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:136731-136781:-1:exon

LOC109002801
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002801
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 145731..162325
location: region:145731-162325:1
so has part: feature:145731-162325:1:exon
subclass of: SO_0000010

109002801
type: Gene
SIO_000068: ncbigene

position:145731:1
position: 145731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162325:1
position: 162325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145731-162325:1:exon

LOC109002801
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002801
product: helicase-like transcription factor CHR28, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_018980714.2
SIO_010081: LOC109002801
subclass of: SO_0000673
so part of: LOC109002801
location: join(145731..145901,146994..147060,147153..147358,147440..147630,147709..148074,149719..149790,149862..149939,150038..150938,152768..152898,158283..158504,159483..160052,160336..160545,161852..162325)
location: region:145731-162325:1
so has part: feature:145731-145901:1:exon
so has part: feature:146994-147060:1:exon
so has part: feature:147153-147358:1:exon
so has part: feature:147440-147630:1:exon
so has part: feature:147709-148074:1:exon
so has part: feature:149719-149790:1:exon
so has part: feature:149862-149939:1:exon
so has part: feature:150038-150938:1:exon
so has part: feature:152768-152898:1:exon
so has part: feature:158283-158504:1:exon
so has part: feature:159483-160052:1:exon
so has part: feature:160336-160545:1:exon
so has part: feature:161852-162325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145731-145901:1:exon

position:145901:1
position: 145901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146994-147060:1:exon

position:146994:1
position: 146994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147060:1
position: 147060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:147153-147358:1:exon

position:147153:1
position: 147153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147358:1
position: 147358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:147440-147630:1:exon

position:147440:1
position: 147440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147630:1
position: 147630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:147709-148074:1:exon

position:147709:1
position: 147709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148074:1
position: 148074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:149719-149790:1:exon

position:149719:1
position: 149719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149790:1
position: 149790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:149862-149939:1:exon

position:149862:1
position: 149862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149939:1
position: 149939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:150038-150938:1:exon

position:150038:1
position: 150038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150938:1
position: 150938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:152768-152898:1:exon

position:152768:1
position: 152768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152898:1
position: 152898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:158283-158504:1:exon

position:158283:1
position: 158283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158504:1
position: 158504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:159483-160052:1:exon

position:159483:1
position: 159483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160052:1
position: 160052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:160336-160545:1:exon

position:160336:1
position: 160336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160545:1
position: 160545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:161852-162325:1:exon

position:161852:1
position: 161852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109002801
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002801
product: helicase-like transcription factor CHR28, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_018980707.2
SIO_010081: LOC109002801
subclass of: SO_0000673
so part of: LOC109002801
location: join(145731..145901,147018..147060,147153..147358,147440..147630,147709..148074,149719..149790,149862..149939,150038..150938,152768..152898,158283..158504,159483..160052,160336..160545,161852..162325)
location: region:145731-162325:1
so has part: feature:145731-145901:1:exon
so has part: feature:147018-147060:1:exon
so has part: feature:147153-147358:1:exon
so has part: feature:147440-147630:1:exon
so has part: feature:147709-148074:1:exon
so has part: feature:149719-149790:1:exon
so has part: feature:149862-149939:1:exon
so has part: feature:150038-150938:1:exon
so has part: feature:152768-152898:1:exon
so has part: feature:158283-158504:1:exon
so has part: feature:159483-160052:1:exon
so has part: feature:160336-160545:1:exon
so has part: feature:161852-162325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145731-145901:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147018-147060:1:exon

position:147018:1
position: 147018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:147153-147358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147440-147630:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147709-148074:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149719-149790:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149862-149939:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:150038-150938:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:152768-152898:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:158283-158504:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:159483-160052:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:160336-160545:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:161852-162325:1:exon

LOC109002801
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002801
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase-like transcription factor CHR28
translation: MDFIDISSSDEDLESWETDGRGSTASRALPLWASTQGTNSRATGYSVQSQNVNSPNGASASNGKSSNANNYSRDKHHFHPGSSDTTGGPNHQSAQLDDYESFTNNGNALKRTLPPSLQPITPSTRLRNLAENMGGSHVHDTYESSYHSAGPSATKSKGYLRDQFSRGKNDEVAVYENSGTRMLPPSLMHGKAISSSQFVSSSDASYRPMVGEERQTENDERLIYQAALEDLNQPKFEATLPDGLLSISLLRHQKIALAWMLQKETRSLHCMGGILADDQGLGKTISMIALIQMQKSLQSKPTSEDLCNHKTEALNLDDDDDNGSGGVVEVKKSEESDGLKPIPEVSTSTQSFRRQRPAAGTLVVCPASVLRQWARELDEKVADEAKLSVLVYHGGSRTKDPVALAKYDVVLTTYAIVTNEVPKQPLVEEDDADEKNEVYGLSAEFATDKKRKKTTNVTKRGKKGRKGMDSSIDCGCGPLARVGWFRVILDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAVYKSFYNTIKLPISRNSLHGYKKLQAVLRAIMLRRTKGTLIDGEPIIKLPPKTVHLTKVNFSTEERAFYTKLEADSRSQFKAYAAAGTVNQNYANILLMLLRLRQACDHPFLVKDYKSDSVGKDSLEMAKKLPRDMLINLLNRLETSFAICHVCNDPPEDPVVTMCGHVFCYQCVSEYLTGDDNTCPASACKEQLGSDVVFSKATLSSCLSDNVDGSPMNSQFTESSLVLQNEYSSSKIRAVLEILQTHCKMNCSMECNGSSLSEEKAHAENFHSSVSAVKHTTVYSKAPAEGAIKAIVFSQWTSMLDLVEISLNQFCIQYRRLDGTMTLGARDRAVRDFNTDPEVTVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRITIKDTVEDRILALQEEKRKMVASAFGEDQSGGFATRLTVEDLKYLFMV
SIO_010081: LOC109002801
subclass of: SO_0000673
so part of: LOC109002801
location: join(147229..147358,147440..147630,147709..148074,149719..149790,149862..149939,150038..150938,152768..152898,158283..158504,159483..160052,160336..160545,161852..161956)
location: region:147229-161956:1
so has part: feature:147229-147358:1:exon
so has part: feature:147440-147630:1:exon
so has part: feature:147709-148074:1:exon
so has part: feature:149719-149790:1:exon
so has part: feature:149862-149939:1:exon
so has part: feature:150038-150938:1:exon
so has part: feature:152768-152898:1:exon
so has part: feature:158283-158504:1:exon
so has part: feature:159483-160052:1:exon
so has part: feature:160336-160545:1:exon
so has part: feature:161852-161956:1:exon

XP_018836252.2
type: Protein
SIO_000068: ncbiprotein

position:147229:1
position: 147229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161956:1
position: 161956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147229-147358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147440-147630:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147709-148074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149719-149790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149862-149939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150038-150938:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:152768-152898:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158283-158504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:159483-160052:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160336-160545:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:161852-161956:1:exon

LOC109002801
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002801
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase-like transcription factor CHR28
translation: MDFIDISSSDEDLESWETDGRGSTASRALPLWASTQGTNSRATGYSVQSQNVNSPNGASASNGKSSNANNYSRDKHHFHPGSSDTTGGPNHQSAQLDDYESFTNNGNALKRTLPPSLQPITPSTRLRNLAENMGGSHVHDTYESSYHSAGPSATKSKGYLRDQFSRGKNDEVAVYENSGTRMLPPSLMHGKAISSSQFVSSSDASYRPMVGEERQTENDERLIYQAALEDLNQPKFEATLPDGLLSISLLRHQKIALAWMLQKETRSLHCMGGILADDQGLGKTISMIALIQMQKSLQSKPTSEDLCNHKTEALNLDDDDDNGSGGVVEVKKSEESDGLKPIPEVSTSTQSFRRQRPAAGTLVVCPASVLRQWARELDEKVADEAKLSVLVYHGGSRTKDPVALAKYDVVLTTYAIVTNEVPKQPLVEEDDADEKNEVYGLSAEFATDKKRKKTTNVTKRGKKGRKGMDSSIDCGCGPLARVGWFRVILDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAVYKSFYNTIKLPISRNSLHGYKKLQAVLRAIMLRRTKGTLIDGEPIIKLPPKTVHLTKVNFSTEERAFYTKLEADSRSQFKAYAAAGTVNQNYANILLMLLRLRQACDHPFLVKDYKSDSVGKDSLEMAKKLPRDMLINLLNRLETSFAICHVCNDPPEDPVVTMCGHVFCYQCVSEYLTGDDNTCPASACKEQLGSDVVFSKATLSSCLSDNVDGSPMNSQFTESSLVLQNEYSSSKIRAVLEILQTHCKMNCSMECNGSSLSEEKAHAENFHSSVSAVKHTTVYSKAPAEGAIKAIVFSQWTSMLDLVEISLNQFCIQYRRLDGTMTLGARDRAVRDFNTDPEVTVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRITIKDTVEDRILALQEEKRKMVASAFGEDQSGGFATRLTVEDLKYLFMV
SIO_010081: LOC109002801
subclass of: SO_0000673
so part of: LOC109002801
location: join(147229..147358,147440..147630,147709..148074,149719..149790,149862..149939,150038..150938,152768..152898,158283..158504,159483..160052,160336..160545,161852..161956)
location: region:147229-161956:1
so has part: feature:147229-147358:1:exon
so has part: feature:147440-147630:1:exon
so has part: feature:147709-148074:1:exon
so has part: feature:149719-149790:1:exon
so has part: feature:149862-149939:1:exon
so has part: feature:150038-150938:1:exon
so has part: feature:152768-152898:1:exon
so has part: feature:158283-158504:1:exon
so has part: feature:159483-160052:1:exon
so has part: feature:160336-160545:1:exon
so has part: feature:161852-161956:1:exon

XP_018836259.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147229-147358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147440-147630:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147709-148074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149719-149790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149862-149939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150038-150938:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:152768-152898:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158283-158504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:159483-160052:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160336-160545:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:161852-161956:1:exon

LOC109002796
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(164499..166562)
location: region:164499-166562:-1
so has part: feature:164499-166562:-1:exon
subclass of: SO_0000010

109002796
type: Gene
SIO_000068: ncbigene

position:164499:-1
position: 164499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166562:-1
position: 166562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164499-166562:-1:exon

LOC109002796
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002796
product: protein ASPARTIC PROTEASE IN GUARD CELL 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018980693.2
SIO_010081: LOC109002796
subclass of: SO_0000673
so part of: LOC109002796
location: complement(164499..166562)
location: region:164499-166562:-1
so has part: feature:164499-166562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:164499-166562:-1:exon

LOC109002796
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ASPARTIC PROTEASE IN GUARD CELL 2-like
translation: MDQSSPALLLVVVVVLLFLHLHLPAGIASSAFTSTTASSANHGNTIPDDHHSDNSQHLNVKEIMADTKIISQPQELLETHHETSDSKWKLKLLHRDKITAASLHHNFHDRFRELMKRDVSRFTSLIRRLTINGTSSTSDDPYHHEVLEENFGSDVVSGMDQGSGEYFVRIGVGSPPTSQYMVIDSGSDIAWVQCQPCNQCYRQSDPVFDPADSASFAGVSCSSAVCDRLEKAGCHGGRCRYEVSYGDGSYTKGTLALETLTFGRTVIRNVAIGCGHTNQGMFVGAAGLLGLGGGSMSFVGQLGGEAGGAFSYCLVSRGTETSGSLEFGRGAMPMGAAWVPLIRNPRAPSFYYVGLSGLGVGGMRVPIPEEMFRLTELGYGGVVMDTGTAVTRLPTLAYEAFREAYIEQTRNLPRATGVPIFDTCYDLSGFVSVRVPTVSFYFSGGPILTLPAKNILIPVNEGGTFCFAFAPSSSGLSIIGNIQQEGIQITFDGANGFVGFGPDVC
SIO_010081: LOC109002796
subclass of: SO_0000673
so part of: LOC109002796
location: complement(164839..166356)
location: region:164839-166356:-1
so has part: feature:164839-166356:-1:exon

XP_018836238.1
type: Protein
SIO_000068: ncbiprotein

position:164839:-1
position: 164839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166356:-1
position: 166356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164839-166356:-1:exon

LOC109002786
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002786
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 179074..203761
location: region:179074-203761:1
so has part: feature:179074-203761:1:exon
subclass of: SO_0000010

109002786
type: Gene
SIO_000068: ncbigene

position:179074:1
position: 179074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203761:1
position: 203761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179074-203761:1:exon

LOC109002786
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002786
product: splicing factor 3B subunit 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 79 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_035685856.1
SIO_010081: LOC109002786
subclass of: SO_0000673
so part of: LOC109002786
location: join(179074..183049,203590..203761)
location: region:179074-203761:1
so has part: feature:179074-183049:1:exon
so has part: feature:203590-203761:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179074-183049:1:exon

position:183049:1
position: 183049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:203590-203761:1:exon

position:203590:1
position: 203590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109002786
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002786
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor 3B subunit 1-like
translation: MDPDIAKTQEERKRLEQQLASITSLTFDTDLYGGNDRDSYVTSIPVTDDDENLDSIDNEVARKLASYTAPKSLLKEMPRGAGAEDDNDDAFGGFKKPQRIIDREDDYRKRRLNRVISPERHDAFAAGEKTPDPSVRTYADVMREEALKREKEETLKRIAKKKEEEESAAKSDKATEDKGPKRRNRWDQSQDDGAAAAKKPKTTSDWDLPEDATPGRWDATPTPGRLGDATPSASVGRRNRWDETPTPGRLADATPAGGATPGATPAGMTWDATPKISGLATPTPKRQRSRWDETPATMGSATPMAGATPAAAASFTPGITPVGGVELATPTPGAINLRGAITPEQYNLLRWEKDIEERNRPLTDEELDAMFPQEGYKILEPPASYVPIRTPARKLLATPTPLGTPLYSIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEDDEEELSPDEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKARELGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLLDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFKNFWVRRMALDRRNYRQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALIHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPVLEDEQNNVYSRPELMMFV
SIO_010081: LOC109002786
subclass of: SO_0000673
so part of: LOC109002786
location: 179216..183025
location: region:179216-183025:1
so has part: feature:179216-183025:1:exon

XP_035541749.1
type: Protein
SIO_000068: ncbiprotein

position:179216:1
position: 179216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183025:1
position: 183025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179216-183025:1:exon

LOC109002782
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002782
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 199586..203755
location: region:199586-203755:1
so has part: feature:199586-203755:1:exon
subclass of: SO_0000010

109002782
type: Gene
SIO_000068: ncbigene

position:199586:1
position: 199586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203755:1
position: 203755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199586-203755:1:exon

LOC109002782
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002782
product: splicing factor 3B subunit 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 long SRA read, 80 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035685855.1
SIO_010081: LOC109002782
subclass of: SO_0000673
so part of: LOC109002782
location: 199586..203755
location: region:199586-203755:1
so has part: feature:199586-203755:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:199586-203755:1:exon

LOC109002782
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002782
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor 3B subunit 1-like
translation: MDPDIAKTQEERKRLEQQLASITSLTFDTDLYGGNDRDSYVTSIPVTDDDENLDSIDNEVARKLASYTAPKSLLKEMPRGAGAEDDNDDAFGGFKKPQRIIDREDDYRKRRLNRVISPERHDAFAAGEKTPDPSVRTYADVMREEALKREKEETLKRIAKKKEEEESAAKSDKATEDKGPKRRNRWDQSQDDGAAAAKKPKTTSDWDLPEDATPGRWDATPTPGRLGDATPSASVGRRNRWDETPTPGRLADATPAGGATPGATPAGMTWDATPKISGLATPTPKRQRSRWDETPATMGSATPMAGATPAAAASFTPGITPVGGVELATPTPGAINLRGAITPEQYNLLRWEKDIEERNRPLTDEELDAMFPQEGYKILEPPASYVPIRTPARKLLATPTPLGTPLYSIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEDDEEELSPDEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKARELGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLLDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFKNFWVRRMALDRRNYRQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALIHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPVLEDEQNNVYSRPELMMFV
SIO_010081: LOC109002782
subclass of: SO_0000673
so part of: LOC109002782
location: 199756..203565
location: region:199756-203565:1
so has part: feature:199756-203565:1:exon

XP_035541748.1
type: Protein
SIO_000068: ncbiprotein

position:199756:1
position: 199756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203565:1
position: 203565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199756-203565:1:exon

LOC109002773
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 204411..205142
location: region:204411-205142:1
so has part: feature:204411-205142:1:exon
subclass of: SO_0000010

109002773
type: Gene
SIO_000068: ncbigene

position:204411:1
position: 204411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205142:1
position: 205142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204411-205142:1:exon

LOC109002773
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002773
product: uncharacterized LOC109002773
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018980662.2
SIO_010081: LOC109002773
subclass of: SO_0000673
so part of: LOC109002773
location: 204411..205142
location: region:204411-205142:1
so has part: feature:204411-205142:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204411-205142:1:exon

LOC109002773
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109002773
translation: MEPNRRKKMEKSKRTAINNEEEKKVEELLQAAQDELLLKLSLDSHMSRGPPDYLHTDLDRRFQSLKSRPSLPISPSQSQKLTPSSVASAGAEDEELKADLGDELSARFAALKGSLFSSSSSSSSTNVISVGPISSSDDDEEDEVEKLIRWAKDAARLDPSPPSDEDDDEEEDNHQHEKVHQRK
SIO_010081: LOC109002773
subclass of: SO_0000673
so part of: LOC109002773
location: 204463..205014
location: region:204463-205014:1
so has part: feature:204463-205014:1:exon

XP_018836207.1
type: Protein
SIO_000068: ncbiprotein

position:204463:1
position: 204463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205014:1
position: 205014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204463-205014:1:exon

LOC109002755
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 214718..219541
location: region:214718-219541:1
so has part: feature:214718-219541:1:exon
subclass of: SO_0000010

109002755
type: Gene
SIO_000068: ncbigene

position:214718:1
position: 214718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219541:1
position: 219541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214718-219541:1:exon

LOC109002755
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002755
product: transcription factor SRM1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_035686086.1
SIO_010081: LOC109002755
subclass of: SO_0000673
so part of: LOC109002755
location: join(214718..215710,218769..219541)
location: region:214718-219541:1
so has part: feature:214718-215710:1:exon
so has part: feature:218769-219541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:214718-215710:1:exon

position:215710:1
position: 215710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218769-219541:1:exon

position:218769:1
position: 218769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109002755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SRM1-like
translation: MTVDEAGISSLWSRHQDKAFEIALATHPEDAPDRWEKIAADVPGKTVEEIKHHYELLVDDINLIESGRVPLPSYNSSLEGSTSHTCDEGTGKKGGHLGHHNNESNHGNKASRSDQERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVGDGDISAPQGPITGQTNGGSAGVSSGKSTKPQLQPQAGPASVGMYGAPTIGQPIGGSLVSAVGTPVNLPTGPHMAYGVRAPVPGVIVPGAPMNMGPMGYPMPPTSAAHR
SIO_010081: LOC109002755
subclass of: SO_0000673
so part of: LOC109002755
location: join(215325..215710,218769..219276)
location: region:215325-219276:1
so has part: feature:215325-215710:1:exon
so has part: feature:218769-219276:1:exon

XP_035541979.1
type: Protein
SIO_000068: ncbiprotein

position:215325:1
position: 215325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219276:1
position: 219276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215325-215710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218769-219276:1:exon

LOC109002763
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002763
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 219895..222036
location: region:219895-222036:1
so has part: feature:219895-222036:1:exon
subclass of: SO_0000010

109002763
type: Gene
SIO_000068: ncbigene

position:219895:1
position: 219895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222036:1
position: 222036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219895-222036:1:exon

LOC109002763
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002763
product: GEM-like protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 21 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018980654.2
SIO_010081: LOC109002763
subclass of: SO_0000673
so part of: LOC109002763
location: join(219895..220109,220683..220877,220987..221067,221299..221573,221697..222036)
location: region:219895-222036:1
so has part: feature:219895-220109:1:exon
so has part: feature:220683-220877:1:exon
so has part: feature:220987-221067:1:exon
so has part: feature:221299-221573:1:exon
so has part: feature:221697-222036:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219895-220109:1:exon

position:220109:1
position: 220109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:220683-220877:1:exon

position:220683:1
position: 220683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220877:1
position: 220877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:220987-221067:1:exon

position:220987:1
position: 220987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221067:1
position: 221067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:221299-221573:1:exon

position:221299:1
position: 221299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221573:1
position: 221573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:221697-222036:1:exon

position:221697:1
position: 221697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109002763
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002763
product: GEM-like protein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 21 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035686100.1
SIO_010081: LOC109002763
subclass of: SO_0000673
so part of: LOC109002763
location: join(219944..220109,220766..220877,220987..221067,221299..221573,221697..222013)
location: region:219944-222013:1
so has part: feature:219944-220109:1:exon
so has part: feature:220766-220877:1:exon
so has part: feature:220987-221067:1:exon
so has part: feature:221299-221573:1:exon
so has part: feature:221697-222013:1:exon

position:219944:1
position: 219944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222013:1
position: 222013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219944-220109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220766-220877:1:exon

position:220766:1
position: 220766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:220987-221067:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221299-221573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221697-222013:1:exon

LOC109002763
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002763
product: GEM-like protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035686099.1
SIO_010081: LOC109002763
subclass of: SO_0000673
so part of: LOC109002763
location: join(219944..220109,220335..220352,220683..220877,220987..221067,221299..221573,221697..221987)
location: region:219944-221987:1
so has part: feature:219944-220109:1:exon
so has part: feature:220335-220352:1:exon
so has part: feature:220683-220877:1:exon
so has part: feature:220987-221067:1:exon
so has part: feature:221299-221573:1:exon
so has part: feature:221697-221987:1:exon

position:221987:1
position: 221987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219944-220109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220335-220352:1:exon

position:220335:1
position: 220335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220352:1
position: 220352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:220683-220877:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:220987-221067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221299-221573:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221697-221987:1:exon

LOC109002763
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002763
product: GEM-like protein 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035686101.1
SIO_010081: LOC109002763
subclass of: SO_0000673
so part of: LOC109002763
location: join(219944..220109,220743..220877,220987..221067,221299..221573,221697..221987)
location: region:219944-221987:1
so has part: feature:219944-220109:1:exon
so has part: feature:220743-220877:1:exon
so has part: feature:220987-221067:1:exon
so has part: feature:221299-221573:1:exon
so has part: feature:221697-221987:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219944-220109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220743-220877:1:exon

position:220743:1
position: 220743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:220987-221067:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221299-221573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221697-221987:1:exon

LOC109002763
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002763
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GEM-like protein 4
translation: MGRMKSNGKAHPAEIPAKGYSPQQGKIDSVLKRMNKLKKKTKNFAHGVLEHVRLGNKFTETVRWKLRLGAKILQVGGFEKVFKELFSVSEGEKLLKAFQCFLSTTAGPVAGLLFISTKKVSFCSERSIKVSSPNGEMVRFHYKVLIPLKKIMRVDLSENVRKPTAKYIEVTTWDNFDFWFMGFLNYQKSYKYLELAVSHAGEN
SIO_010081: LOC109002763
subclass of: SO_0000673
so part of: LOC109002763
location: join(220805..220877,220987..221067,221299..221573,221697..221879)
location: region:220805-221879:1
so has part: feature:220805-220877:1:exon
so has part: feature:220987-221067:1:exon
so has part: feature:221299-221573:1:exon
so has part: feature:221697-221879:1:exon

XP_018836199.1
type: Protein
SIO_000068: ncbiprotein

position:220805:1
position: 220805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221879:1
position: 221879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220805-220877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220987-221067:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:221299-221573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221697-221879:1:exon

LOC109002763
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002763
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GEM-like protein 4
translation: MGRMKSNGKAHPAEIPAKGYSPQQGKIDSVLKRMNKLKKKTKNFAHGVLEHVRLGNKFTETVRWKLRLGAKILQVGGFEKVFKELFSVSEGEKLLKAFQCFLSTTAGPVAGLLFISTKKVSFCSERSIKVSSPNGEMVRFHYKVLIPLKKIMRVDLSENVRKPTAKYIEVTTWDNFDFWFMGFLNYQKSYKYLELAVSHAGEN
SIO_010081: LOC109002763
subclass of: SO_0000673
so part of: LOC109002763
location: join(220805..220877,220987..221067,221299..221573,221697..221879)
location: region:220805-221879:1
so has part: feature:220805-220877:1:exon
so has part: feature:220987-221067:1:exon
so has part: feature:221299-221573:1:exon
so has part: feature:221697-221879:1:exon

XP_035541992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220805-220877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220987-221067:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:221299-221573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221697-221879:1:exon

LOC109002763
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002763
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GEM-like protein 4
translation: MGRMKSNGKAHPAEIPAKGYSPQQGKIDSVLKRMNKLKKKTKNFAHGVLEHVRLGNKFTETVRWKLRLGAKILQVGGFEKVFKELFSVSEGEKLLKAFQCFLSTTAGPVAGLLFISTKKVSFCSERSIKVSSPNGEMVRFHYKVLIPLKKIMRVDLSENVRKPTAKYIEVTTWDNFDFWFMGFLNYQKSYKYLELAVSHAGEN
SIO_010081: LOC109002763
subclass of: SO_0000673
so part of: LOC109002763
location: join(220805..220877,220987..221067,221299..221573,221697..221879)
location: region:220805-221879:1
so has part: feature:220805-220877:1:exon
so has part: feature:220987-221067:1:exon
so has part: feature:221299-221573:1:exon
so has part: feature:221697-221879:1:exon

XP_035541993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220805-220877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220987-221067:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:221299-221573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221697-221879:1:exon

LOC109002763
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002763
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GEM-like protein 4
translation: MGRMKSNGKAHPAEIPAKGYSPQQGKIDSVLKRMNKLKKKTKNFAHGVLEHVRLGNKFTETVRWKLRLGAKILQVGGFEKVFKELFSVSEGEKLLKAFQCFLSTTAGPVAGLLFISTKKVSFCSERSIKVSSPNGEMVRFHYKVLIPLKKIMRVDLSENVRKPTAKYIEVTTWDNFDFWFMGFLNYQKSYKYLELAVSHAGEN
SIO_010081: LOC109002763
subclass of: SO_0000673
so part of: LOC109002763
location: join(220805..220877,220987..221067,221299..221573,221697..221879)
location: region:220805-221879:1
so has part: feature:220805-220877:1:exon
so has part: feature:220987-221067:1:exon
so has part: feature:221299-221573:1:exon
so has part: feature:221697-221879:1:exon

XP_035541994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220805-220877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220987-221067:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:221299-221573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221697-221879:1:exon

LOC109002592
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(223390..226739)
location: region:223390-226739:-1
so has part: feature:223390-226739:-1:exon
subclass of: SO_0000010

109002592
type: Gene
SIO_000068: ncbigene

position:223390:-1
position: 223390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226739:-1
position: 226739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223390-226739:-1:exon

LOC109002592
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002592
product: piriformospora indica-insensitive protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_018980403.2
SIO_010081: LOC109002592
subclass of: SO_0000673
so part of: LOC109002592
location: complement(join(223390..224796,225763..226739))
location: region:223390-226739:-1
so has part: feature:225763-226739:-1:exon
so has part: feature:223390-224796:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:225763-226739:-1:exon

position:225763:-1
position: 225763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:223390-224796:-1:exon

position:224796:-1
position: 224796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002592
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: piriformospora indica-insensitive protein 2-like
translation: MKSITTISNVTFAVFVFCLAVWCCGEEDMDVAPMEKTEKEALYFAIQGFVGNWWNGSALYPDPCGWTPIQGVSCDLFEGLWYVTALNIGPVHDNSLGCATKLEFRPQLFELKYLKTLSFFNCFVSSHRHPSIPSNNWKKLAGSLESLEFRSNPGLIGQFPASFGFLLKLQSLVLIESGLAGKLPTNIGNLINLKRLVLAGNRFNGPIPFSFGGLSQLLIFDLSRNTLSGPLPSSLGGLTSLLKLDLSNNQLEGMLPGEISNLKNLTLLDLRNNNFSGGLSKSLEEMCSLEELVLSNNPIGGVFTYLEWHKLHNLVVLDLSNAGLKGEIPESISKLKRLRFLGLSDNHLMGKLPAKLSTLPCVTALYLNGNNLTGEINFSEGFLGKMGRRFGAWNNPNLCYPVGLKSPSHVPYGVKLCQKEVTVLESNPRTK
SIO_010081: LOC109002592
subclass of: SO_0000673
so part of: LOC109002592
location: complement(join(223711..224796,225763..225972))
location: region:223711-225972:-1
so has part: feature:225763-225972:-1:exon
so has part: feature:223711-224796:-1:exon

XP_018835948.2
type: Protein
SIO_000068: ncbiprotein

position:223711:-1
position: 223711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225972:-1
position: 225972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225763-225972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223711-224796:-1:exon

LOC109002741
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002741
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 239072..247786
location: region:239072-247786:1
so has part: feature:239072-247786:1:exon
subclass of: SO_0000010

109002741
type: Gene
SIO_000068: ncbigene

position:239072:1
position: 239072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247786:1
position: 247786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239072-247786:1:exon

LOC109002741
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002741
product: protein decapping 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 long SRA reads, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_018980619.2
SIO_010081: LOC109002741
subclass of: SO_0000673
so part of: LOC109002741
location: join(239072..239417,240894..240994,241381..241452,241554..242510,246452..246517,246960..247154,247282..247392,247469..247786)
location: region:239072-247786:1
so has part: feature:239072-239417:1:exon
so has part: feature:240894-240994:1:exon
so has part: feature:241381-241452:1:exon
so has part: feature:241554-242510:1:exon
so has part: feature:246452-246517:1:exon
so has part: feature:246960-247154:1:exon
so has part: feature:247282-247392:1:exon
so has part: feature:247469-247786:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:239072-239417:1:exon

position:239417:1
position: 239417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240894-240994:1:exon

position:240894:1
position: 240894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240994:1
position: 240994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:241381-241452:1:exon

position:241381:1
position: 241381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241452:1
position: 241452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:241554-242510:1:exon

position:241554:1
position: 241554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242510:1
position: 242510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:246452-246517:1:exon

position:246452:1
position: 246452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246517:1
position: 246517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:246960-247154:1:exon

position:246960:1
position: 246960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247154:1
position: 247154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:247282-247392:1:exon

position:247282:1
position: 247282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247392:1
position: 247392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:247469-247786:1:exon

position:247469:1
position: 247469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109002741
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002741
product: protein decapping 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_018980611.2
SIO_010081: LOC109002741
subclass of: SO_0000673
so part of: LOC109002741
location: join(239083..239417,240894..240994,241381..241452,241554..242510,246452..246517,246960..247154,247279..247392,247469..247786)
location: region:239083-247786:1
so has part: feature:239083-239417:1:exon
so has part: feature:240894-240994:1:exon
so has part: feature:241381-241452:1:exon
so has part: feature:241554-242510:1:exon
so has part: feature:246452-246517:1:exon
so has part: feature:246960-247154:1:exon
so has part: feature:247279-247392:1:exon
so has part: feature:247469-247786:1:exon

position:239083:1
position: 239083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239083-239417:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240894-240994:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:241381-241452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241554-242510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:246452-246517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:246960-247154:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:247279-247392:1:exon

position:247279:1
position: 247279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:247469-247786:1:exon

LOC109002741
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002741
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein decapping 5 isoform X1
translation: MASESASRSSTTSADSYIGSLISLTSKSEIRYEGVLYNINTQESSIGLENVRSFGTEGRKKDGPQVPPGDKIYKYILFRGSDIKDLQVKSSPPVQPMPPINIDPAIIQSHFARPISTSTSLPPAVSGSMTDISSHSAQLGLHGSSFQGGLPLYQPGGNIASWGATPPPSSANGGGLAMPMYWQGYYGPPNGLPHLHQQSLLRPPPGLPMPSSLQLPMPSSLQLPMQYPNFNVSLPSGSSNLPEVPSPLPPASSNSMNLSSSSLAPSTLPPVPSVTLASETLVNSVPNKAPPSSGLPTIALGSSMPSLAPLAMSSADINAILPPISNKPSAIPGPILSYQASLQSTSSIVGTSNTIRAEAPAPSLVTPGQLLQSVPSAVASSQTLQTVHKDVEVDQVSSSSSESIVPVLAEGQPPLLPLPVPSRTSQKPNGTPFQYRQGYRGRDRGRGSGSSHPVTKFSEDFDFIAMNEKFKKDEVWGHLGKSNKSNSREGDGEVSDEDDTLDDEDAQLSKFEVTQSVYKKDDFFDSLSCNSLNHELQNGRSRFSEQMKIDTETFGDFTRYRGGRGGRGSGRGGRFRGGYYGRGYNHVGRGRGPGIFGRSP
SIO_010081: LOC109002741
subclass of: SO_0000673
so part of: LOC109002741
location: join(239267..239417,240894..240994,241381..241452,241554..242510,246452..246517,246960..247154,247279..247392,247469..247615)
location: region:239267-247615:1
so has part: feature:239267-239417:1:exon
so has part: feature:240894-240994:1:exon
so has part: feature:241381-241452:1:exon
so has part: feature:241554-242510:1:exon
so has part: feature:246452-246517:1:exon
so has part: feature:246960-247154:1:exon
so has part: feature:247279-247392:1:exon
so has part: feature:247469-247615:1:exon

XP_018836156.1
type: Protein
SIO_000068: ncbiprotein

position:239267:1
position: 239267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247615:1
position: 247615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239267-239417:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240894-240994:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:241381-241452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241554-242510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:246452-246517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:246960-247154:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:247279-247392:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:247469-247615:1:exon

LOC109002741
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002741
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein decapping 5 isoform X2
translation: MASESASRSSTTSADSYIGSLISLTSKSEIRYEGVLYNINTQESSIGLENVRSFGTEGRKKDGPQVPPGDKIYKYILFRGSDIKDLQVKSSPPVQPMPPINIDPAIIQSHFARPISTSTSLPPAVSGSMTDISSHSAQLGLHGSSFQGGLPLYQPGGNIASWGATPPPSSANGGGLAMPMYWQGYYGPPNGLPHLHQQSLLRPPPGLPMPSSLQLPMPSSLQLPMQYPNFNVSLPSGSSNLPEVPSPLPPASSNSMNLSSSSLAPSTLPPVPSVTLASETLVNSVPNKAPPSSGLPTIALGSSMPSLAPLAMSSADINAILPPISNKPSAIPGPILSYQASLQSTSSIVGTSNTIRAEAPAPSLVTPGQLLQSVPSAVASSQTLQTVHKDVEVDQVSSSSSESIVPVLAEGQPPLLPLPVPSRTSQKPNGTPFQYRQGYRGRDRGRGSGSSHPVTKFSEDFDFIAMNEKFKKDEVWGHLGKSNKSNSREGDGEVSDEDDTLDDEDAQLSKFEVTSVYKKDDFFDSLSCNSLNHELQNGRSRFSEQMKIDTETFGDFTRYRGGRGGRGSGRGGRFRGGYYGRGYNHVGRGRGPGIFGRSP
SIO_010081: LOC109002741
subclass of: SO_0000673
so part of: LOC109002741
location: join(239267..239417,240894..240994,241381..241452,241554..242510,246452..246517,246960..247154,247282..247392,247469..247615)
location: region:239267-247615:1
so has part: feature:239267-239417:1:exon
so has part: feature:240894-240994:1:exon
so has part: feature:241381-241452:1:exon
so has part: feature:241554-242510:1:exon
so has part: feature:246452-246517:1:exon
so has part: feature:246960-247154:1:exon
so has part: feature:247282-247392:1:exon
so has part: feature:247469-247615:1:exon

XP_018836164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239267-239417:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240894-240994:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:241381-241452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241554-242510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:246452-246517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:246960-247154:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:247282-247392:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:247469-247615:1:exon

LOC109002718
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002718
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 255213..260978
location: region:255213-260978:1
so has part: feature:255213-260978:1:exon
subclass of: SO_0000010

109002718
type: Gene
SIO_000068: ncbigene

position:255213:1
position: 255213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260978:1
position: 260978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255213-260978:1:exon

LOC109002718
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002718
product: protein CHUP1, chloroplastic-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_018980582.2
SIO_010081: LOC109002718
subclass of: SO_0000673
so part of: LOC109002718
location: join(255213..255725,255957..256048,256142..256894,257490..258848,258959..259090,259410..259591,259835..259946,260127..260270,260721..260978)
location: region:255213-260978:1
so has part: feature:255213-255725:1:exon
so has part: feature:255957-256048:1:exon
so has part: feature:256142-256894:1:exon
so has part: feature:257490-258848:1:exon
so has part: feature:258959-259090:1:exon
so has part: feature:259410-259591:1:exon
so has part: feature:259835-259946:1:exon
so has part: feature:260127-260270:1:exon
so has part: feature:260721-260978:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255213-255725:1:exon

position:255725:1
position: 255725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:255957-256048:1:exon

position:255957:1
position: 255957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256048:1
position: 256048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:256142-256894:1:exon

position:256142:1
position: 256142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256894:1
position: 256894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:257490-258848:1:exon

position:257490:1
position: 257490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258848:1
position: 258848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:258959-259090:1:exon

position:258959:1
position: 258959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259090:1
position: 259090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:259410-259591:1:exon

position:259410:1
position: 259410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259591:1
position: 259591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:259835-259946:1:exon

position:259835:1
position: 259835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259946:1
position: 259946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:260127-260270:1:exon

position:260127:1
position: 260127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260270:1
position: 260270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:260721-260978:1:exon

position:260721:1
position: 260721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109002718
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002718
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CHUP1, chloroplastic-like
translation: MITRLSLLVAASIAAFAVRQLNVKTSRSSTSEVRLPENGEANFEPHQCEERGEEQDVYSYDRLKEKDGKEEEEEEEVKLISSVFNRIQGNPIDIYDEEILPEFEDLLSGEIEFPFPGKTINDAEIDRVYEIEMANNASELERLRKLVNELEEREVKLEGELLEYYGLKEQESDILELQRQLKIKTVEIDMLNITINSLQTERKKLQEEIAQGTSAKKELEVARNRIKELQRQIQLEANQTKGQLLLLKQQVSGLQAKEVDAVKKDSEIEKKLKAVEELEIEVVELKRKNKELQHEKRELTVKLDAAEARISVLSNMTESERVAKAREEVNNLRHANEDLLKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNHQAPAGKTSARDLNKSLSPKSQEKAKQLMLEYAGSERGQGDTDLESNLSHPSSPGSEDFDSISIDSSSSRYSSLLKKPTLIQKLKKWGKSKDDFSALSPTSRSLSGGSPSRRPRGPLESLMLRNAGDSMAITTFGRMELEPYSPETPTLPSIRTRVSSSDSLNTVATSFHLMSKSVEGVVDEKYPAYKDRHKLALEREKQIKERAGQARAEKFGDKSNLNLRDPTSKVEGQRPINLPPKLAKIKEKVVVSGDSGNQTNDDKTDSQTISKMKLADIEKRSPRVPRPPPKPSGVSSAGKNPNPPGGIPTAPPPPPGAPPPPPPPPGGPPRPPPPPGSLPRGGGSGDKVHRAPELVEFYQSLMKREAKKDTPSLFSSTPNASDARSNMIGEIENRSSFLLAVKADVETQGDFVMSLATEVRAASFTNIEDLLAFVNWLDEELSFLVDERAVLKHFDWPEGKADALREAAFEYQDLMKLEKRVSAFDDDPKLPCEDALKKMYSLLEKVETSVYALLRTRDMAISRYREFGIPVDWLLDSGVVGKIKLSSVQLARKYMKRVASELDALSGPEKEPNREFLVLQGVRFAFRVHQFAGGFDAESMKAFEELRSRIHTQVGEDNKQDT
SIO_010081: LOC109002718
subclass of: SO_0000673
so part of: LOC109002718
location: join(255617..255725,255957..256048,256142..256894,257490..258848,258959..259090,259410..259591,259835..259946,260127..260270,260721..260819)
location: region:255617-260819:1
so has part: feature:255617-255725:1:exon
so has part: feature:255957-256048:1:exon
so has part: feature:256142-256894:1:exon
so has part: feature:257490-258848:1:exon
so has part: feature:258959-259090:1:exon
so has part: feature:259410-259591:1:exon
so has part: feature:259835-259946:1:exon
so has part: feature:260127-260270:1:exon
so has part: feature:260721-260819:1:exon

XP_018836127.1
type: Protein
SIO_000068: ncbiprotein

position:255617:1
position: 255617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260819:1
position: 260819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255617-255725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255957-256048:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:256142-256894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257490-258848:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:258959-259090:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:259410-259591:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:259835-259946:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260127-260270:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260721-260819:1:exon

LOC109002724
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(261072..264500)
location: region:261072-264500:-1
so has part: feature:261072-264500:-1:exon
subclass of: SO_0000010

109002724
type: Gene
SIO_000068: ncbigene

position:261072:-1
position: 261072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264500:-1
position: 264500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261072-264500:-1:exon

LOC109002724
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002724
product: uncharacterized protein At1g26090, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_018980595.2
SIO_010081: LOC109002724
subclass of: SO_0000673
so part of: LOC109002724
location: complement(join(261072..261815,262215..262631,262736..262907,262972..263165,263272..263346,263437..263580,264175..264500))
location: region:261072-264500:-1
so has part: feature:264175-264500:-1:exon
so has part: feature:263437-263580:-1:exon
so has part: feature:263272-263346:-1:exon
so has part: feature:262972-263165:-1:exon
so has part: feature:262736-262907:-1:exon
so has part: feature:262215-262631:-1:exon
so has part: feature:261072-261815:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264175-264500:-1:exon

position:264175:-1
position: 264175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:263437-263580:-1:exon

position:263437:-1
position: 263437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263580:-1
position: 263580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:263272-263346:-1:exon

position:263272:-1
position: 263272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263346:-1
position: 263346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:262972-263165:-1:exon

position:262972:-1
position: 262972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263165:-1
position: 263165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:262736-262907:-1:exon

position:262736:-1
position: 262736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262907:-1
position: 262907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:262215-262631:-1:exon

position:262215:-1
position: 262215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262631:-1
position: 262631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:261072-261815:-1:exon

position:261815:-1
position: 261815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002724
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein At1g26090, chloroplastic
translation: MASFLSFPLLLANPTSHSTLGRRDFALPASLTDDGGNNSSQQSTKLVTFLGKGGSGKTTSAVFAAQHYALAGLSTCLVIHNQDPSADYLLNCKIGSSPVICNNNLSAVRLETSKILLEPLNRLKRADAHLNMTQGVLEGIVGEELGVLPGMDTIFSVFALGRLVGLLSNVAQENHRKENFDVIIYDGISTEETLRIIGATSKARLYLKYLRNLAEKTDLGRVAGPSLVRLVDEAMSISGSRSYLNGKMSAEVWDTLEQMLERGSSFFSEPHKFGCFLVMHPNSPISVNSALRYWGCTIQAGAQVSGAFGIDSPNLNEELVEQVKRTFSPLPFAFTPQIQVDSPLDWNEVMLNTVGKDARNLLSLPPSHTSDMSSVKFDPAKKSVTLLMPGFEKSEIKLYQYRGGSELLVEAGDQRRVILLPPDLQGKVGGAKFMNRSLVITMR
SIO_010081: LOC109002724
subclass of: SO_0000673
so part of: LOC109002724
location: complement(join(261684..261815,262215..262631,262736..262907,262972..263165,263272..263346,263437..263580,264175..264372))
location: region:261684-264372:-1
so has part: feature:264175-264372:-1:exon
so has part: feature:263437-263580:-1:exon
so has part: feature:263272-263346:-1:exon
so has part: feature:262972-263165:-1:exon
so has part: feature:262736-262907:-1:exon
so has part: feature:262215-262631:-1:exon
so has part: feature:261684-261815:-1:exon

XP_018836140.1
type: Protein
SIO_000068: ncbiprotein

position:261684:-1
position: 261684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264372:-1
position: 264372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264175-264372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263437-263580:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263272-263346:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262972-263165:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262736-262907:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262215-262631:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:261684-261815:-1:exon

LOC118344738
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC118344738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(270195..270779)
location: region:270195-270779:-1
so has part: feature:270195-270779:-1:exon
subclass of: SO_0000010

118344738
type: Gene
SIO_000068: ncbigene

position:270195:-1
position: 270195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270779:-1
position: 270779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270195-270779:-1:exon

LOC118344738
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC118344738
product: CLAVATA3/ESR (CLE)-related protein 12-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035686080.1
SIO_010081: LOC118344738
subclass of: SO_0000673
so part of: LOC118344738
location: complement(270195..270779)
location: region:270195-270779:-1
so has part: feature:270195-270779:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270195-270779:-1:exon

LOC118344738
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC118344738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CLAVATA3/ESR (CLE)-related protein 12-like
translation: MALKISQIILIILLWLSLLFLLFNEFYNFKSKINEKHTSTTISAYSSTPSHIQPLISRKVLARQFDLSPFVKHHQDQKQQHHRRTERSHENTREHQPEPGDDQGEIDPRYGVEKRRVPTGPNPLHH
SIO_010081: LOC118344738
subclass of: SO_0000673
so part of: LOC118344738
location: complement(270258..270638)
location: region:270258-270638:-1
so has part: feature:270258-270638:-1:exon

XP_035541973.1
type: Protein
SIO_000068: ncbiprotein

position:270258:-1
position: 270258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270638:-1
position: 270638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270258-270638:-1:exon

LOC109002554
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002554
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 286043..289275
location: region:286043-289275:1
so has part: feature:286043-289275:1:exon

109002554
type: Gene
SIO_000068: ncbigene

position:286043:1
position: 286043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289275:1
position: 289275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286043-289275:1:exon

LOC109002554
type: Exon
subclass of: SO_0000147
RO_0002162: 51240
gene: LOC109002554
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC109002554
subclass of: SO_0000673
so part of: LOC109002554
location: 286043..286113
location: region:286043-286113:1
so has part: feature:286043-286113:1:exon

position:286113:1
position: 286113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286043-286113:1:exon

LOC109002554
type: Exon
subclass of: SO_0000147
RO_0002162: 51240
gene: LOC109002554
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC109002554
subclass of: SO_0000673
so part of: LOC109002554
location: 286967..287029
location: region:286967-287029:1
so has part: feature:286967-287029:1:exon

position:286967:1
position: 286967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287029:1
position: 287029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286967-287029:1:exon

LOC109002554
type: Exon
subclass of: SO_0000147
RO_0002162: 51240
gene: LOC109002554
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC109002554
subclass of: SO_0000673
so part of: LOC109002554
location: 287116..287195
location: region:287116-287195:1
so has part: feature:287116-287195:1:exon

position:287116:1
position: 287116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287195:1
position: 287195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287116-287195:1:exon

LOC109002554
type: Exon
subclass of: SO_0000147
RO_0002162: 51240
gene: LOC109002554
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC109002554
subclass of: SO_0000673
so part of: LOC109002554
location: 287635..287743
location: region:287635-287743:1
so has part: feature:287635-287743:1:exon

position:287635:1
position: 287635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287743:1
position: 287743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287635-287743:1:exon

LOC109002554
type: Exon
subclass of: SO_0000147
RO_0002162: 51240
gene: LOC109002554
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC109002554
subclass of: SO_0000673
so part of: LOC109002554
location: 288004..288164
location: region:288004-288164:1
so has part: feature:288004-288164:1:exon

position:288004:1
position: 288004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288164:1
position: 288164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288004-288164:1:exon

LOC109002554
type: Exon
subclass of: SO_0000147
RO_0002162: 51240
gene: LOC109002554
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC109002554
subclass of: SO_0000673
so part of: LOC109002554
location: 288433..289275
location: region:288433-289275:1
so has part: feature:288433-289275:1:exon

position:288433:1
position: 288433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288433-289275:1:exon

LOC109002586
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(291310..293511)
location: region:291310-293511:-1
so has part: feature:291310-293511:-1:exon
subclass of: SO_0000010

109002586
type: Gene
SIO_000068: ncbigene

position:291310:-1
position: 291310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293511:-1
position: 293511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291310-293511:-1:exon

LOC109002586
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002586
product: transcription factor TCP12-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018980389.2
SIO_010081: LOC109002586
subclass of: SO_0000673
so part of: LOC109002586
location: complement(291310..293511)
location: region:291310-293511:-1
so has part: feature:291310-293511:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291310-293511:-1:exon

LOC109002586
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor TCP12-like
translation: MFPRSSSDQGPFIYTSPSILEKPFANDEKTSSGQDQEHPSSYSHLSAPFFEDDELFFSHFLSQQKLFVCSNSQAEIENSVAATDKATDNRKEACSNTVAEQIPSKRKFPNKKSIGDAKPTGPRKRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSRTAITELTESISHVKQTCSDGAKSVSVTSDSEVVSENVEIASDGDQRGFCADVESFNRVATEKTNRKLHIVARDSRNKARARARERTRKKMMIRGHEVSTEISVGPNPNNSNLVRLCSSSPQLETGNQESYFPSQNMKSSPKIVAEVEERCSHLLGHQIDSVCINENFLGIVGAPTSSNLVLNDSRNDLAASSGGNTEEDFPGFPVNLSSNSNNNANMQSFCCTTSTNTKSSTGNVQLRIPSAMGTSKSHELKHTSIFMTTYNTQEQIMLNSIFRSSTPNIQDQNRSSIFFTSLNTQRENPSTNFLATSINNCLQSHFLGNEFS
SIO_010081: LOC109002586
subclass of: SO_0000673
so part of: LOC109002586
location: complement(291539..293050)
location: region:291539-293050:-1
so has part: feature:291539-293050:-1:exon

XP_018835934.2
type: Protein
SIO_000068: ncbiprotein

position:291539:-1
position: 291539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293050:-1
position: 293050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291539-293050:-1:exon

LOC109002700
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 320174..322709
location: region:320174-322709:1
so has part: feature:320174-322709:1:exon
subclass of: SO_0000010

109002700
type: Gene
SIO_000068: ncbigene

position:320174:1
position: 320174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322709:1
position: 322709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320174-322709:1:exon

LOC109002700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002700
product: transcription factor bHLH30-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_018980553.2
SIO_010081: LOC109002700
subclass of: SO_0000673
so part of: LOC109002700
location: join(320174..320331,320454..321149,322081..322709)
location: region:320174-322709:1
so has part: feature:320174-320331:1:exon
so has part: feature:320454-321149:1:exon
so has part: feature:322081-322709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:320174-320331:1:exon

position:320331:1
position: 320331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:320454-321149:1:exon

position:320454:1
position: 320454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321149:1
position: 321149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:322081-322709:1:exon

position:322081:1
position: 322081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109002700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002700
product: transcription factor bHLH30-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035685721.1
SIO_010081: LOC109002700
subclass of: SO_0000673
so part of: LOC109002700
location: join(320174..320331,320461..321149,322081..322709)
location: region:320174-322709:1
so has part: feature:320174-320331:1:exon
so has part: feature:320461-321149:1:exon
so has part: feature:322081-322709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:320174-320331:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320461-321149:1:exon

position:320461:1
position: 320461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:322081-322709:1:exon

LOC109002700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor bHLH30-like
translation: MCGKKLEEDRGECSQTVDNINMIQSFQEQLFHQQQQQIMLQHQQQNSDIYGGGRGLIFPQVSPISLQPWPLPPVHAFSPAGHFATNPVRDHHDPLNIVPPTPSSFAGLFNRRPPPDHLQFAYDDHGPSSDHLRIISDTLVPQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETNPVPTEVDELTVDTSDEDGKFVIKASLSCEDRSDLLPDLIKTLKSLRLRTLKAEITTLGGRVKNVLLVSGDEDSISSSTSGEKQQQQQQRHCISSIEEALKAVMEKTAGDESSSGSVKRQRTTNINILEHS
SIO_010081: LOC109002700
subclass of: SO_0000673
so part of: LOC109002700
location: join(320547..321149,322081..322557)
location: region:320547-322557:1
so has part: feature:320547-321149:1:exon
so has part: feature:322081-322557:1:exon

XP_018836098.1
type: Protein
SIO_000068: ncbiprotein

position:320547:1
position: 320547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322557:1
position: 322557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320547-321149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322081-322557:1:exon

LOC109002700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor bHLH30-like
translation: MCGKKLEEDRGECSQTVDNINMIQSFQEQLFHQQQQQIMLQHQQQNSDIYGGGRGLIFPQVSPISLQPWPLPPVHAFSPAGHFATNPVRDHHDPLNIVPPTPSSFAGLFNRRPPPDHLQFAYDDHGPSSDHLRIISDTLVPQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETNPVPTEVDELTVDTSDEDGKFVIKASLSCEDRSDLLPDLIKTLKSLRLRTLKAEITTLGGRVKNVLLVSGDEDSISSSTSGEKQQQQQQRHCISSIEEALKAVMEKTAGDESSSGSVKRQRTTNINILEHS
SIO_010081: LOC109002700
subclass of: SO_0000673
so part of: LOC109002700
location: join(320547..321149,322081..322557)
location: region:320547-322557:1
so has part: feature:320547-321149:1:exon
so has part: feature:322081-322557:1:exon

XP_035541614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320547-321149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322081-322557:1:exon

LOC109002712
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002712
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 325828..329173
location: region:325828-329173:1
so has part: feature:325828-329173:1:exon
subclass of: SO_0000011

109002712
type: Gene
SIO_000068: ncbigene

position:325828:1
position: 325828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329173:1
position: 329173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325828-329173:1:exon

LOC109002712
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51240
nc RNA class: lncRNA
gene: LOC109002712
product: uncharacterized LOC109002712, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_001998052.2
SIO_010081: LOC109002712
subclass of: SO_0000673
so part of: LOC109002712
location: join(325828..326087,327140..327357,328833..329173)
location: region:325828-329173:1
so has part: feature:325828-326087:1:exon
so has part: feature:327140-327357:1:exon
so has part: feature:328833-329173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:325828-326087:1:exon

position:326087:1
position: 326087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:327140-327357:1:exon

position:327140:1
position: 327140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327357:1
position: 327357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:328833-329173:1:exon

position:328833:1
position: 328833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109002712
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51240
nc RNA class: lncRNA
gene: LOC109002712
product: uncharacterized LOC109002712, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004798432.1
SIO_010081: LOC109002712
subclass of: SO_0000673
so part of: LOC109002712
location: join(325828..326087,327140..327357,327642..328621)
location: region:325828-328621:1
so has part: feature:325828-326087:1:exon
so has part: feature:327140-327357:1:exon
so has part: feature:327642-328621:1:exon

position:328621:1
position: 328621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325828-326087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327140-327357:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327642-328621:1:exon

position:327642:1
position: 327642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109002691
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002691
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(330677..333843)
location: region:330677-333843:-1
so has part: feature:330677-333843:-1:exon
subclass of: SO_0000010

109002691
type: Gene
SIO_000068: ncbigene

position:330677:-1
position: 330677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333843:-1
position: 333843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330677-333843:-1:exon

LOC109002691
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002691
product: leucoanthocyanidin reductase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, 27 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_018980541.2
SIO_010081: LOC109002691
subclass of: SO_0000673
so part of: LOC109002691
location: complement(join(330677..331205,331461..331664,332787..333024,333151..333291,333414..333843))
location: region:330677-333843:-1
so has part: feature:333414-333843:-1:exon
so has part: feature:333151-333291:-1:exon
so has part: feature:332787-333024:-1:exon
so has part: feature:331461-331664:-1:exon
so has part: feature:330677-331205:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:333414-333843:-1:exon

position:333414:-1
position: 333414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:333151-333291:-1:exon

position:333151:-1
position: 333151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333291:-1
position: 333291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:332787-333024:-1:exon

position:332787:-1
position: 332787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333024:-1
position: 333024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:331461-331664:-1:exon

position:331461:-1
position: 331461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331664:-1
position: 331664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:330677-331205:-1:exon

position:331205:-1
position: 331205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002691
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002691
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucoanthocyanidin reductase-like
translation: MTMTRLPSSVPTTKLAKVGRLLIVGAAGFIGQFVAEASLDAGRPTYVLVRPGLCFPSSKTHTIKSLQDKGAIILHGLINEKESMEKILKENEIDIVISAVGGGNILDQLCLIEAIKSVGTVKRFLPSEFGHDVDRAEPVEPGLSMYKAKQRVRRLVEESDIPYTYICCNSIASWPYYDNTHPSEVLPPLDRFQIYGDGSVKAFFVAGTDIGKFTLKTVDDIRTLNRCVHFRPTSNLYNINELASLWEKKIGKSLPRVTVTESDLLAAAAENCIPRSIVASFTHDIFIKGCQINFTIDSPQDVEVNTLYPDETFRTLDECFNDFLLKVDPKSMSNNETPTAKSPVVEPMTITATCA
SIO_010081: LOC109002691
subclass of: SO_0000673
so part of: LOC109002691
location: complement(join(330946..331205,331461..331664,332787..333024,333151..333291,333414..333638))
location: region:330946-333638:-1
so has part: feature:333414-333638:-1:exon
so has part: feature:333151-333291:-1:exon
so has part: feature:332787-333024:-1:exon
so has part: feature:331461-331664:-1:exon
so has part: feature:330946-331205:-1:exon

XP_018836086.2
type: Protein
SIO_000068: ncbiprotein

position:330946:-1
position: 330946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333638:-1
position: 333638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333414-333638:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333151-333291:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:332787-333024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331461-331664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:330946-331205:-1:exon

LOC109002665
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002665
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(335980..346338)
location: region:335980-346338:-1
so has part: feature:335980-346338:-1:exon
subclass of: SO_0000010

109002665
type: Gene
SIO_000068: ncbigene

position:335980:-1
position: 335980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346338:-1
position: 346338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335980-346338:-1:exon

LOC109002665
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002665
product: transcriptional repressor ILP1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_018980519.2
SIO_010081: LOC109002665
subclass of: SO_0000673
so part of: LOC109002665
location: complement(join(335980..336755,337809..338098,338265..338547,338770..339440,341491..341658,345069..346338))
location: region:335980-346338:-1
so has part: feature:345069-346338:-1:exon
so has part: feature:341491-341658:-1:exon
so has part: feature:338770-339440:-1:exon
so has part: feature:338265-338547:-1:exon
so has part: feature:337809-338098:-1:exon
so has part: feature:335980-336755:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:345069-346338:-1:exon

position:345069:-1
position: 345069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:341491-341658:-1:exon

position:341491:-1
position: 341491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341658:-1
position: 341658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:338770-339440:-1:exon

position:338770:-1
position: 338770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339440:-1
position: 339440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:338265-338547:-1:exon

position:338265:-1
position: 338265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338547:-1
position: 338547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:337809-338098:-1:exon

position:337809:-1
position: 337809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338098:-1
position: 338098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:335980-336755:-1:exon

position:336755:-1
position: 336755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002665
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional repressor ILP1
translation: MSSSRPKNFRRRAGDDDEDSQKDDANVPNITTTTTTTTKAASKPKPKKLLSFADDEDAETPSRSSSSSSVKRSSKPSSSSHKITSLRDRQAHSTPSVSVSNVQPQAGTYTKEALLELQKNTRTLVSSRSTSSEPSIVLKGLLKPPSSDDPAISRTLRQSDDDRDVSDEDEDNRDRRDAQTRFASLGIGKPRDSPGSALFPDQATINAIRAKRERLRKSRAAAPDFISLDGGSNHGEAEGLSDEEPEFRGRIAMFGEKQKIDDSETMKKGVFEDDDEVVHERAVGVNLVKDSASENAVEEEDEEEKMWEEEQFRKGLGKRMDDGATRVAVTASVPVVQSLQQQQHKSVYPATVPSAVGGMSIGGAIGDLDTMLSIPQQAEVAKKALQENLRRLKESHGRTVISLTKTDDDLSASLSNIAALEKSLSAANEKFIFMQKLRHFVSVICDFLQDKAPYIEELEEQMQKLHEERTSTILERRAADNDDEHMEVEAAVNAAMSVFSQRGSSAEIIAAATSAALAASAAVREQTNLPVKLDEFGRDINLQKRMDMLRRAERRKARSDSKRISSMEVENSNQRIEGELSSDESDSESTAYQHHRKLLLQTADQIFSDAAEEYSRLSAVKERFEKWKRDYSSSYRDAYMSLSVPAIFSPYVRLELLKWDPLHEDIDFFDMKWHSLLFDYGLLNEKSDFASDDADSNLVPELVEKVALPILHHEIAHCWDMLSTRETKNAVNATSLVTNYVPASSEALSDLLVAIHTCLADAVANLTVPTWSPLVLKAVPNAARVAAYRFGKSVRLLRNICMWKEILALPVLVKLALDELLYGKMLPHVRSIATNVHDAITRTERIIVSLSGVWAGPNVTGERSQKLKPLVDYVLFLGKTLEKKHVMGVTESETSGLARRLKKMLVELNEYDYARDIARTFHLKEAL
SIO_010081: LOC109002665
subclass of: SO_0000673
so part of: LOC109002665
location: complement(join(336563..336755,337809..338098,338265..338547,338770..339440,341491..341658,345069..346247))
location: region:336563-346247:-1
so has part: feature:345069-346247:-1:exon
so has part: feature:341491-341658:-1:exon
so has part: feature:338770-339440:-1:exon
so has part: feature:338265-338547:-1:exon
so has part: feature:337809-338098:-1:exon
so has part: feature:336563-336755:-1:exon

XP_018836064.2
type: Protein
SIO_000068: ncbiprotein

position:336563:-1
position: 336563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346247:-1
position: 346247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345069-346247:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:341491-341658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:338770-339440:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:338265-338547:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:337809-338098:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336563-336755:-1:exon

LOC109021576
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109021576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 361276..362778
location: region:361276-362778:1
so has part: feature:361276-362778:1:exon
subclass of: SO_0000010

109021576
type: Gene
SIO_000068: ncbigene

position:361276:1
position: 361276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362778:1
position: 362778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361276-362778:1:exon

LOC109021576
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109021576
product: AP2/ERF and B3 domain-containing transcription repressor RAV2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019004236.2
SIO_010081: LOC109021576
subclass of: SO_0000673
so part of: LOC109021576
location: 361276..362778
location: region:361276-362778:1
so has part: feature:361276-362778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361276-362778:1:exon

LOC109021576
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109021576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP2/ERF and B3 domain-containing transcription repressor RAV2-like
translation: MEGSCIDEISSSTSTEYSISISPATLSPSPATKSPESLCRVGSGTTSTILDSESGIEAESRGKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAAKAYDIAAQRFRGRDAVTNFKSLASASTTEDQDHDIETAFLNSHSKAEIVDMLRKHTYNDELEQSKRNLGLDGNGGNRSKAEGFLCNPFGSGRAFKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQTGSTTKGVLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKDKNLKAGDIVSFQRSTGPDKQLYIDWKGRTGSGAGVVVGLSNPVFPVQPVQMVRLFGVNILQVPVVGVVESTIIGGYHGKRTRERDLLALECSKKQRMLGAL
SIO_010081: LOC109021576
subclass of: SO_0000673
so part of: LOC109021576
location: 361431..362570
location: region:361431-362570:1
so has part: feature:361431-362570:1:exon

XP_018859781.1
type: Protein
SIO_000068: ncbiprotein

position:361431:1
position: 361431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362570:1
position: 362570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361431-362570:1:exon

LOC109002670
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 365133..374328
location: region:365133-374328:1
so has part: feature:365133-374328:1:exon
subclass of: SO_0000010

109002670
type: Gene
SIO_000068: ncbigene

position:365133:1
position: 365133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374328:1
position: 374328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365133-374328:1:exon

LOC109002670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002670
product: methionine aminopeptidase 1B, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_018980528.2
SIO_010081: LOC109002670
subclass of: SO_0000673
so part of: LOC109002670
location: join(365133..365327,365655..365736,366022..366259,367047..367208,367283..367324,368054..368125,368320..368399,369595..369692,373037..373084,373969..374328)
location: region:365133-374328:1
so has part: feature:365133-365327:1:exon
so has part: feature:365655-365736:1:exon
so has part: feature:366022-366259:1:exon
so has part: feature:367047-367208:1:exon
so has part: feature:367283-367324:1:exon
so has part: feature:368054-368125:1:exon
so has part: feature:368320-368399:1:exon
so has part: feature:369595-369692:1:exon
so has part: feature:373037-373084:1:exon
so has part: feature:373969-374328:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:365133-365327:1:exon

position:365327:1
position: 365327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:365655-365736:1:exon

position:365655:1
position: 365655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365736:1
position: 365736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:366022-366259:1:exon

position:366022:1
position: 366022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366259:1
position: 366259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:367047-367208:1:exon

position:367047:1
position: 367047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367208:1
position: 367208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:367283-367324:1:exon

position:367283:1
position: 367283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367324:1
position: 367324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:368054-368125:1:exon

position:368054:1
position: 368054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368125:1
position: 368125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:368320-368399:1:exon

position:368320:1
position: 368320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368399:1
position: 368399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:369595-369692:1:exon

position:369595:1
position: 369595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369692:1
position: 369692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:373037-373084:1:exon

position:373037:1
position: 373037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373084:1
position: 373084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:373969-374328:1:exon

position:373969:1
position: 373969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109002670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methionine aminopeptidase 1B, chloroplastic
translation: MALASAARLAHSSSLQLSACFHGEALSSSSKSTLFMGAPLTFSGSALPGKQLHSRKQLVVFSKKFSGLQEAMRIKRERELKSVKKVTRRPPLRRGKVSPRLLVPDHIPKPPYAGSNLLPEISSEYQSHDSEGIVHMRAACELAARVLDNAGKLVRPSVTTNEIDKAVHQMIIDAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGDVSDAMKHLVKVTEECLERGIAVCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGSIFHSEPLIYHHRNDQPGHMVEGQTFTIEPILTLGSIDCITWPDNWTTVTADGSPAAQFEHSILITKTGAEILTTY
SIO_010081: LOC109002670
subclass of: SO_0000673
so part of: LOC109002670
location: join(365183..365327,365655..365736,366022..366259,367047..367208,367283..367324,368054..368125,368320..368399,369595..369692,373037..373084,373969..374114)
location: region:365183-374114:1
so has part: feature:365183-365327:1:exon
so has part: feature:365655-365736:1:exon
so has part: feature:366022-366259:1:exon
so has part: feature:367047-367208:1:exon
so has part: feature:367283-367324:1:exon
so has part: feature:368054-368125:1:exon
so has part: feature:368320-368399:1:exon
so has part: feature:369595-369692:1:exon
so has part: feature:373037-373084:1:exon
so has part: feature:373969-374114:1:exon

XP_018836073.1
type: Protein
SIO_000068: ncbiprotein

position:365183:1
position: 365183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374114:1
position: 374114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365183-365327:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:365655-365736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:366022-366259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:367047-367208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:367283-367324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:368054-368125:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:368320-368399:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:369595-369692:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373037-373084:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:373969-374114:1:exon

LOC109002540
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(378822..379873)
location: region:378822-379873:-1
so has part: feature:378822-379873:-1:exon
subclass of: SO_0000010

109002540
type: Gene
SIO_000068: ncbigene

position:378822:-1
position: 378822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379873:-1
position: 379873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378822-379873:-1:exon

LOC109002540
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002540
product: zinc finger protein WIP6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
transcript id: XM_018980333.1
SIO_010081: LOC109002540
subclass of: SO_0000673
so part of: LOC109002540
location: complement(join(378822..379295,379514..379873))
location: region:378822-379873:-1
so has part: feature:379514-379873:-1:exon
so has part: feature:378822-379295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:379514-379873:-1:exon

position:379514:-1
position: 379514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:378822-379295:-1:exon

position:379295:-1
position: 379295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein WIP6
translation: MHSPTFTYTSTSESAIWEADENSIFLSLGPPGPHNRKNPFYIPYSNHHVPHQIPSSVGGTASVALHVGPPSGPSSSNPDEIAVPVEGQYWIPSPAQILAGPTQFSCTVCNKKFNRYNNMQMHMWAHGSQYRKGPESLRGSKPTSSILKLPCYCCTEGCKNNIEHPRSKPLKDFRTLQTHYKRMHGVKPYWCQKCGKAFAVRGDWKTHEKNCGKLWFCICGSNFKHKRSLKDHVKAFGDGHAPHSTRELCEVEEEEEDDDDDHGTENENRGHGSVFFK
SIO_010081: LOC109002540
subclass of: SO_0000673
so part of: LOC109002540
location: complement(join(378822..379295,379514..379873))
location: region:378822-379873:-1
so has part: feature:379514-379873:-1:exon
so has part: feature:378822-379295:-1:exon

XP_018835878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379514-379873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378822-379295:-1:exon

LOC109002655
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 385362..388061
location: region:385362-388061:1
so has part: feature:385362-388061:1:exon
subclass of: SO_0000010

109002655
type: Gene
SIO_000068: ncbigene

position:385362:1
position: 385362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388061:1
position: 388061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385362-388061:1:exon

LOC109002655
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002655
product: transcription factor HHO3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_018980506.2
SIO_010081: LOC109002655
subclass of: SO_0000673
so part of: LOC109002655
location: join(385362..385934,386042..386325,386439..386763,386938..387014,387414..388061)
location: region:385362-388061:1
so has part: feature:385362-385934:1:exon
so has part: feature:386042-386325:1:exon
so has part: feature:386439-386763:1:exon
so has part: feature:386938-387014:1:exon
so has part: feature:387414-388061:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:385362-385934:1:exon

position:385934:1
position: 385934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:386042-386325:1:exon

position:386042:1
position: 386042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386325:1
position: 386325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:386439-386763:1:exon

position:386439:1
position: 386439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386763:1
position: 386763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:386938-387014:1:exon

position:386938:1
position: 386938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387014:1
position: 387014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:387414-388061:1:exon

position:387414:1
position: 387414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109002655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HHO3-like
translation: MCFRQNTFRCWGDYIISSRPKRFASETHNFTNGLSYFPSLSLFLNEKMQHHGGLSVQKYVKALEDELRKIQVFRRELPLCLELVTQAIEACRQQLSGTTTENNSHGQSESSEQTTSNDVPPVFEEFFPIKRSASSDDDNEEHHSHEANTETVIRNDSKKKSDWLRSVQLWNNPTSDPRPKEDVPRKATDLKRNGGGGGGGAFQPFQREKSVGKSSASEGKTPSSVAREAAPAVGVATTSSSAVTATGGSDGNDRREQREGQSERKQRRNWSPELHKRFLNALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSIHNNGNPQQPQVVVVGGIWMPAPDYAAAMAASGEASGVAAANGIYAPVAAPPPPPAVQQESSSQKVQRLQHKECRPSKSQSEERFSHSGKRARSDSPATSSSTHTTTTFPVF
SIO_010081: LOC109002655
subclass of: SO_0000673
so part of: LOC109002655
location: join(385676..385934,386042..386325,386439..386763,386938..387014,387414..387788)
location: region:385676-387788:1
so has part: feature:385676-385934:1:exon
so has part: feature:386042-386325:1:exon
so has part: feature:386439-386763:1:exon
so has part: feature:386938-387014:1:exon
so has part: feature:387414-387788:1:exon

XP_018836051.1
type: Protein
SIO_000068: ncbiprotein

position:385676:1
position: 385676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387788:1
position: 387788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385676-385934:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:386042-386325:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:386439-386763:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:386938-387014:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387414-387788:1:exon

LOC109002637
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(392333..396251)
location: region:392333-396251:-1
so has part: feature:392333-396251:-1:exon
subclass of: SO_0000010

109002637
type: Gene
SIO_000068: ncbigene

position:392333:-1
position: 392333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396251:-1
position: 396251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392333-396251:-1:exon

LOC109002637
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002637
product: uncharacterized LOC109002637, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_018980497.2
SIO_010081: LOC109002637
subclass of: SO_0000673
so part of: LOC109002637
location: complement(join(392333..392723,392834..392956,394132..394222,394311..394502,394687..394805,395019..395177,395299..395424,395516..395609,395702..395954,396068..396251))
location: region:392333-396251:-1
so has part: feature:396068-396251:-1:exon
so has part: feature:395702-395954:-1:exon
so has part: feature:395516-395609:-1:exon
so has part: feature:395299-395424:-1:exon
so has part: feature:395019-395177:-1:exon
so has part: feature:394687-394805:-1:exon
so has part: feature:394311-394502:-1:exon
so has part: feature:394132-394222:-1:exon
so has part: feature:392834-392956:-1:exon
so has part: feature:392333-392723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:396068-396251:-1:exon

position:396068:-1
position: 396068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:395702-395954:-1:exon

position:395702:-1
position: 395702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395954:-1
position: 395954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:395516-395609:-1:exon

position:395516:-1
position: 395516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395609:-1
position: 395609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:395299-395424:-1:exon

position:395299:-1
position: 395299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395424:-1
position: 395424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:395019-395177:-1:exon

position:395019:-1
position: 395019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395177:-1
position: 395177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:394687-394805:-1:exon

position:394687:-1
position: 394687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394805:-1
position: 394805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:394311-394502:-1:exon

position:394311:-1
position: 394311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394502:-1
position: 394502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:394132-394222:-1:exon

position:394132:-1
position: 394132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394222:-1
position: 394222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:392834-392956:-1:exon

position:392834:-1
position: 392834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392956:-1
position: 392956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:392333-392723:-1:exon

position:392723:-1
position: 392723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002637
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002637
product: uncharacterized LOC109002637, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_018980481.2
SIO_010081: LOC109002637
subclass of: SO_0000673
so part of: LOC109002637
location: complement(join(392333..392688,392834..392956,394132..394222,394311..394502,394687..394805,395019..395177,395299..395424,395516..395609,395702..395954,396068..396250))
location: region:392333-396250:-1
so has part: feature:396068-396250:-1:exon
so has part: feature:395702-395954:-1:exon
so has part: feature:395516-395609:-1:exon
so has part: feature:395299-395424:-1:exon
so has part: feature:395019-395177:-1:exon
so has part: feature:394687-394805:-1:exon
so has part: feature:394311-394502:-1:exon
so has part: feature:394132-394222:-1:exon
so has part: feature:392834-392956:-1:exon
so has part: feature:392333-392688:-1:exon

position:396250:-1
position: 396250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396068-396250:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:395702-395954:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395516-395609:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:395299-395424:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:395019-395177:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:394687-394805:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:394311-394502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:394132-394222:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:392834-392956:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:392333-392688:-1:exon

position:392688:-1
position: 392688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002637
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002637
product: uncharacterized LOC109002637, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_018980489.2
SIO_010081: LOC109002637
subclass of: SO_0000673
so part of: LOC109002637
location: complement(join(392333..392657,392834..392956,394132..394222,394311..394502,394687..394805,395019..395177,395299..395424,395516..395609,395702..395954,396068..396249))
location: region:392333-396249:-1
so has part: feature:396068-396249:-1:exon
so has part: feature:395702-395954:-1:exon
so has part: feature:395516-395609:-1:exon
so has part: feature:395299-395424:-1:exon
so has part: feature:395019-395177:-1:exon
so has part: feature:394687-394805:-1:exon
so has part: feature:394311-394502:-1:exon
so has part: feature:394132-394222:-1:exon
so has part: feature:392834-392956:-1:exon
so has part: feature:392333-392657:-1:exon

position:396249:-1
position: 396249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396068-396249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:395702-395954:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395516-395609:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:395299-395424:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:395019-395177:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:394687-394805:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:394311-394502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:394132-394222:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:392834-392956:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:392333-392657:-1:exon

position:392657:-1
position: 392657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002637
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109002637
translation: MAVVQFNSLPRLCRTTAPLSPISYTRLVSTVSIPVCTASNVLKLPTTRRNRAVSALVSEENAVGSSSSGTDVFKLTYLEGNSWLWDVGGLTILVDPILVGNLDFGIPWLYDAAKKFLKKFQLSDLPEIDCLLITQSLDDHCHLKTLKPLSEKSPNLRVVATPNARPLLDPLFSNVTYIEPGQSSVIEARNGSTVRIQATPGPVLGPPWQRPENGYLVNSPQGQQTLYYEPHCVYNKSFLGKERADIIITPVIKQLLPKFTLVSGQEDAVQLARVLHAKFIVPMKNGDLDSKGLLSSIIQAEGTIESFKELLSKELPDAQVLEPTPGVPLEVPAPSNLP
SIO_010081: LOC109002637
subclass of: SO_0000673
so part of: LOC109002637
location: complement(join(392864..392956,394132..394222,394311..394502,394687..394805,395019..395177,395299..395424,395516..395609,395702..395844))
location: region:392864-395844:-1
so has part: feature:395702-395844:-1:exon
so has part: feature:395516-395609:-1:exon
so has part: feature:395299-395424:-1:exon
so has part: feature:395019-395177:-1:exon
so has part: feature:394687-394805:-1:exon
so has part: feature:394311-394502:-1:exon
so has part: feature:394132-394222:-1:exon
so has part: feature:392864-392956:-1:exon

XP_018836026.1
type: Protein
SIO_000068: ncbiprotein

position:392864:-1
position: 392864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395844:-1
position: 395844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395702-395844:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:395516-395609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395299-395424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:395019-395177:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:394687-394805:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:394311-394502:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:394132-394222:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:392864-392956:-1:exon

LOC109002637
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109002637
translation: MAVVQFNSLPRLCRTTAPLSPISYTRLVSTVSIPVCTASNVLKLPTTRRNRAVSALVSEENAVGSSSSGTDVFKLTYLEGNSWLWDVGGLTILVDPILVGNLDFGIPWLYDAAKKFLKKFQLSDLPEIDCLLITQSLDDHCHLKTLKPLSEKSPNLRVVATPNARPLLDPLFSNVTYIEPGQSSVIEARNGSTVRIQATPGPVLGPPWQRPENGYLVNSPQGQQTLYYEPHCVYNKSFLGKERADIIITPVIKQLLPKFTLVSGQEDAVQLARVLHAKFIVPMKNGDLDSKGLLSSIIQAEGTIESFKELLSKELPDAQVLEPTPGVPLEVPAPSNLP
SIO_010081: LOC109002637
subclass of: SO_0000673
so part of: LOC109002637
location: complement(join(392864..392956,394132..394222,394311..394502,394687..394805,395019..395177,395299..395424,395516..395609,395702..395844))
location: region:392864-395844:-1
so has part: feature:395702-395844:-1:exon
so has part: feature:395516-395609:-1:exon
so has part: feature:395299-395424:-1:exon
so has part: feature:395019-395177:-1:exon
so has part: feature:394687-394805:-1:exon
so has part: feature:394311-394502:-1:exon
so has part: feature:394132-394222:-1:exon
so has part: feature:392864-392956:-1:exon

XP_018836034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395702-395844:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:395516-395609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395299-395424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:395019-395177:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:394687-394805:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:394311-394502:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:394132-394222:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:392864-392956:-1:exon

LOC109002637
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109002637
translation: MAVVQFNSLPRLCRTTAPLSPISYTRLVSTVSIPVCTASNVLKLPTTRRNRAVSALVSEENAVGSSSSGTDVFKLTYLEGNSWLWDVGGLTILVDPILVGNLDFGIPWLYDAAKKFLKKFQLSDLPEIDCLLITQSLDDHCHLKTLKPLSEKSPNLRVVATPNARPLLDPLFSNVTYIEPGQSSVIEARNGSTVRIQATPGPVLGPPWQRPENGYLVNSPQGQQTLYYEPHCVYNKSFLGKERADIIITPVIKQLLPKFTLVSGQEDAVQLARVLHAKFIVPMKNGDLDSKGLLSSIIQAEGTIESFKELLSKELPDAQVLEPTPGVPLEVPAPSNLP
SIO_010081: LOC109002637
subclass of: SO_0000673
so part of: LOC109002637
location: complement(join(392864..392956,394132..394222,394311..394502,394687..394805,395019..395177,395299..395424,395516..395609,395702..395844))
location: region:392864-395844:-1
so has part: feature:395702-395844:-1:exon
so has part: feature:395516-395609:-1:exon
so has part: feature:395299-395424:-1:exon
so has part: feature:395019-395177:-1:exon
so has part: feature:394687-394805:-1:exon
so has part: feature:394311-394502:-1:exon
so has part: feature:394132-394222:-1:exon
so has part: feature:392864-392956:-1:exon

XP_018836042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395702-395844:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:395516-395609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395299-395424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:395019-395177:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:394687-394805:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:394311-394502:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:394132-394222:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:392864-392956:-1:exon

LOC109002621
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002621
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(397273..401251)
location: region:397273-401251:-1
so has part: feature:397273-401251:-1:exon
subclass of: SO_0000010

109002621
type: Gene
SIO_000068: ncbigene

position:397273:-1
position: 397273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401251:-1
position: 401251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397273-401251:-1:exon

LOC109002621
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002621
product: uncharacterized LOC109002621
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018980462.2
SIO_010081: LOC109002621
subclass of: SO_0000673
so part of: LOC109002621
location: complement(join(397273..397620,399408..399545,399719..399885,399973..400237,400605..400772,400890..401251))
location: region:397273-401251:-1
so has part: feature:400890-401251:-1:exon
so has part: feature:400605-400772:-1:exon
so has part: feature:399973-400237:-1:exon
so has part: feature:399719-399885:-1:exon
so has part: feature:399408-399545:-1:exon
so has part: feature:397273-397620:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:400890-401251:-1:exon

position:400890:-1
position: 400890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:400605-400772:-1:exon

position:400605:-1
position: 400605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400772:-1
position: 400772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:399973-400237:-1:exon

position:399973:-1
position: 399973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400237:-1
position: 400237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:399719-399885:-1:exon

position:399719:-1
position: 399719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399885:-1
position: 399885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:399408-399545:-1:exon

position:399408:-1
position: 399408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399545:-1
position: 399545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:397273-397620:-1:exon

position:397620:-1
position: 397620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002621
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002621
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109002621
translation: MMLQFPDPVKLKTKKLVFEEAYAARDSATLEQMKELSSKRRVIEESINESSSITKAIEREISGGLTSHIQQGLRRLEGYLPLLENFICYTDLISSNGLMLRWTSNLKIRWTSALSSSSSFFNLRGPKFFQIDNLRFELGMTLFLYGAILRERALEALPADLVQSATFFREAAGVYHHLANEVLPSLQHALPAERPPEAVSSVSTIMSLICLAEAQAVTIRKAEEKGIAISVLAKLHQGVTQLLDEADVISRECRDISSRFVEFILSCKAIHELRSQKYLAESVKIAGQVGVAVGVLRLALINIKKKMPGEESWKSVFRKEIYNVSEMLRKFEHENEFVWHEKIASGDELPLPQGKKIVSIIPYNRQKWESVPVFKI
SIO_010081: LOC109002621
subclass of: SO_0000673
so part of: LOC109002621
location: complement(join(397273..397620,399408..399545,399719..399885,399973..400237,400605..400772,400890..400934))
location: region:397273-400934:-1
so has part: feature:400890-400934:-1:exon
so has part: feature:400605-400772:-1:exon
so has part: feature:399973-400237:-1:exon
so has part: feature:399719-399885:-1:exon
so has part: feature:399408-399545:-1:exon
so has part: feature:397273-397620:-1:exon

XP_018836007.1
type: Protein
SIO_000068: ncbiprotein

position:400934:-1
position: 400934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400890-400934:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:400605-400772:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399973-400237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399719-399885:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:399408-399545:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:397273-397620:-1:exon

LOC109002616
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002616
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 404039..422175
location: region:404039-422175:1
so has part: feature:404039-422175:1:exon
subclass of: SO_0000010

109002616
type: Gene
SIO_000068: ncbigene

position:404039:1
position: 404039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422175:1
position: 422175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404039-422175:1:exon

LOC109002616
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002616
product: mediator of RNA polymerase II transcription subunit 25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 14 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_018980448.2
SIO_010081: LOC109002616
subclass of: SO_0000673
so part of: LOC109002616
location: join(404039..404243,405036..405066,405506..405569,411223..411353,413789..413998,414102..414167,414546..414756,415560..415627,415733..416581,417362..417415,417571..417599,419888..419956,420078..420162,420795..420881,421261..422175)
location: region:404039-422175:1
so has part: feature:404039-404243:1:exon
so has part: feature:405036-405066:1:exon
so has part: feature:405506-405569:1:exon
so has part: feature:411223-411353:1:exon
so has part: feature:413789-413998:1:exon
so has part: feature:414102-414167:1:exon
so has part: feature:414546-414756:1:exon
so has part: feature:415560-415627:1:exon
so has part: feature:415733-416581:1:exon
so has part: feature:417362-417415:1:exon
so has part: feature:417571-417599:1:exon
so has part: feature:419888-419956:1:exon
so has part: feature:420078-420162:1:exon
so has part: feature:420795-420881:1:exon
so has part: feature:421261-422175:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:404039-404243:1:exon

position:404243:1
position: 404243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:405036-405066:1:exon

position:405036:1
position: 405036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405066:1
position: 405066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:405506-405569:1:exon

position:405506:1
position: 405506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405569:1
position: 405569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:411223-411353:1:exon

position:411223:1
position: 411223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411353:1
position: 411353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:413789-413998:1:exon

position:413789:1
position: 413789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413998:1
position: 413998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:414102-414167:1:exon

position:414102:1
position: 414102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414167:1
position: 414167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:414546-414756:1:exon

position:414546:1
position: 414546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414756:1
position: 414756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:415560-415627:1:exon

position:415560:1
position: 415560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415627:1
position: 415627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:415733-416581:1:exon

position:415733:1
position: 415733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416581:1
position: 416581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:417362-417415:1:exon

position:417362:1
position: 417362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417415:1
position: 417415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:417571-417599:1:exon

position:417571:1
position: 417571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417599:1
position: 417599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:419888-419956:1:exon

position:419888:1
position: 419888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419956:1
position: 419956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:420078-420162:1:exon

position:420078:1
position: 420078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420162:1
position: 420162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:420795-420881:1:exon

position:420795:1
position: 420795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420881:1
position: 420881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:421261-422175:1:exon

position:421261:1
position: 421261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109002616
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002616
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 25
translation: MADKKLIVVVEGTAAMGPFWQSFVSDYLEKIIRCFCGNELNGQKPPTSHAELSVVTFYTHGSYCGCLVQRTGWTRDVDIFLQWLSAIPFAGGGFYDAAIAEGLAEALMMFPILQNGNPNQQNVDTQRHCILVAASNPYPLPTPVYRPQLQNLEKNESIEEQTESRTSDAETVAKSFPQCFVSLSVICPKQLPKLKAIYNAGKRNPRIGDPPVDNVKNPQFLVLISENFMEARAALSRSGITSLPSNQSPVNVDMAPITSVTGPPPASIPLGNGSIMNRQAITAGNNPPATVKVEPSTVTSMLSGPGFSHIPSVARAASQGVPSLQSSSPSSTSQEMITNNDNVQDLKPIVSGVTQPLRPVGPAPANVNILNNLSQARQVMNSAALTGGSSIGLQSMGQTPISMHMSNMISSGMATSVPAAQNVLSSGQSAIPSISGSGPLTGNGQVAQNPGLGSFNSATSNASGNSNLGISQPMGNLQGGVSMGQSGPGMNQGNLSGVQMAQSGIGMNQNMMSGLGPSVVSSGTGTMIPTPGMPQQVQSGMQSLGVNNNSATNMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLSQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISSQQQQQQQMQQQQHQQMQPQQHTQLQQQQLQQLQQQQLPQLQQQQQLTQMQQQQIPQLQQQQQLPQMQQQQIPQLQQQQIPQLQQQQPLSQLQPQQQLPQMQQQQPISQLQTQQQLPQLQQLQQQLPQQQQMVGTGMGQAYVQGPGRSQLVSQGQVSSQGQPNMSGGGFMS
SIO_010081: LOC109002616
subclass of: SO_0000673
so part of: LOC109002616
location: join(404146..404243,405036..405066,405506..405569,411223..411353,413789..413998,414102..414167,414546..414756,415560..415627,415733..416581,417362..417415,417571..417599,419888..419956,420078..420162,420795..420881,421261..421806)
location: region:404146-421806:1
so has part: feature:404146-404243:1:exon
so has part: feature:405036-405066:1:exon
so has part: feature:405506-405569:1:exon
so has part: feature:411223-411353:1:exon
so has part: feature:413789-413998:1:exon
so has part: feature:414102-414167:1:exon
so has part: feature:414546-414756:1:exon
so has part: feature:415560-415627:1:exon
so has part: feature:415733-416581:1:exon
so has part: feature:417362-417415:1:exon
so has part: feature:417571-417599:1:exon
so has part: feature:419888-419956:1:exon
so has part: feature:420078-420162:1:exon
so has part: feature:420795-420881:1:exon
so has part: feature:421261-421806:1:exon

XP_018835993.2
type: Protein
SIO_000068: ncbiprotein

position:404146:1
position: 404146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421806:1
position: 421806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404146-404243:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405036-405066:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405506-405569:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411223-411353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:413789-413998:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:414102-414167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414546-414756:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:415560-415627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:415733-416581:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:417362-417415:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:417571-417599:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:419888-419956:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:420078-420162:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:420795-420881:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:421261-421806:1:exon

LOC109002578
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 423451..429059
location: region:423451-429059:1
so has part: feature:423451-429059:1:exon

109002578
type: Gene
SIO_000068: ncbigene

position:423451:1
position: 423451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429059:1
position: 429059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423451-429059:1:exon

LOC109002578
type: Exon
subclass of: SO_0000147
RO_0002162: 51240
gene: LOC109002578
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109002578
subclass of: SO_0000673
so part of: LOC109002578
location: 423451..423556
location: region:423451-423556:1
so has part: feature:423451-423556:1:exon

position:423556:1
position: 423556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423451-423556:1:exon

LOC109002578
type: Exon
subclass of: SO_0000147
RO_0002162: 51240
gene: LOC109002578
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109002578
subclass of: SO_0000673
so part of: LOC109002578
location: 423665..423804
location: region:423665-423804:1
so has part: feature:423665-423804:1:exon

position:423665:1
position: 423665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423804:1
position: 423804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423665-423804:1:exon

LOC109002578
type: Exon
subclass of: SO_0000147
RO_0002162: 51240
gene: LOC109002578
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109002578
subclass of: SO_0000673
so part of: LOC109002578
location: 423942..424330
location: region:423942-424330:1
so has part: feature:423942-424330:1:exon

position:423942:1
position: 423942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424330:1
position: 424330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423942-424330:1:exon

LOC109002578
type: Exon
subclass of: SO_0000147
RO_0002162: 51240
gene: LOC109002578
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109002578
subclass of: SO_0000673
so part of: LOC109002578
location: 425436..425843
location: region:425436-425843:1
so has part: feature:425436-425843:1:exon

position:425436:1
position: 425436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425843:1
position: 425843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425436-425843:1:exon

LOC109002578
type: Exon
subclass of: SO_0000147
RO_0002162: 51240
gene: LOC109002578
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109002578
subclass of: SO_0000673
so part of: LOC109002578
location: 426211..426262
location: region:426211-426262:1
so has part: feature:426211-426262:1:exon

position:426211:1
position: 426211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426262:1
position: 426262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426211-426262:1:exon

LOC109002578
type: Exon
subclass of: SO_0000147
RO_0002162: 51240
gene: LOC109002578
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109002578
subclass of: SO_0000673
so part of: LOC109002578
location: 428908..429059
location: region:428908-429059:1
so has part: feature:428908-429059:1:exon

position:428908:1
position: 428908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428908-429059:1:exon

LOC109002607
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(429120..433662)
location: region:429120-433662:-1
so has part: feature:429120-433662:-1:exon
subclass of: SO_0000010

109002607
type: Gene
SIO_000068: ncbigene

position:429120:-1
position: 429120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433662:-1
position: 433662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429120-433662:-1:exon

LOC109002607
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002607
product: GDT1-like protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 76 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_018980437.2
SIO_010081: LOC109002607
subclass of: SO_0000673
so part of: LOC109002607
location: complement(join(429120..429412,429503..429575,430360..430421,430508..430552,430633..430707,430884..430931,431015..431051,431160..431248,432197..432244,432350..432409,433255..433323,433438..433662))
location: region:429120-433662:-1
so has part: feature:433438-433662:-1:exon
so has part: feature:433255-433323:-1:exon
so has part: feature:432350-432409:-1:exon
so has part: feature:432197-432244:-1:exon
so has part: feature:431160-431248:-1:exon
so has part: feature:431015-431051:-1:exon
so has part: feature:430884-430931:-1:exon
so has part: feature:430633-430707:-1:exon
so has part: feature:430508-430552:-1:exon
so has part: feature:430360-430421:-1:exon
so has part: feature:429503-429575:-1:exon
so has part: feature:429120-429412:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:433438-433662:-1:exon

position:433438:-1
position: 433438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433255-433323:-1:exon

position:433255:-1
position: 433255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433323:-1
position: 433323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:432350-432409:-1:exon

position:432350:-1
position: 432350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432409:-1
position: 432409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:432197-432244:-1:exon

position:432197:-1
position: 432197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432244:-1
position: 432244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:431160-431248:-1:exon

position:431160:-1
position: 431160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431248:-1
position: 431248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:431015-431051:-1:exon

position:431015:-1
position: 431015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431051:-1
position: 431051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:430884-430931:-1:exon

position:430884:-1
position: 430884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430931:-1
position: 430931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:430633-430707:-1:exon

position:430633:-1
position: 430633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430707:-1
position: 430707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:430508-430552:-1:exon

position:430508:-1
position: 430508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430552:-1
position: 430552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:430360-430421:-1:exon

position:430360:-1
position: 430360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430421:-1
position: 430421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:429503-429575:-1:exon

position:429503:-1
position: 429503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429575:-1
position: 429575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:429120-429412:-1:exon

position:429412:-1
position: 429412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109002607
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GDT1-like protein 4
translation: MSSVVQGLTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLTGCLSALIVMTLLSALVGWAAPNLISRKWTHHITTLLFFGFGLWSLWEGFTSEGEAEELAEVEAKLNADWKADTGATKKRSKDDDDDDLKKQKRPFLSQFFSPILLKAFSITFFGEWGDKSQLATIGLAADENPFGVILGGIMGQALCTTAAVLGGRSLASQISEKIVALSGGVLFVVFGIQSFLSTVES
SIO_010081: LOC109002607
subclass of: SO_0000673
so part of: LOC109002607
location: complement(join(429341..429412,429503..429575,430360..430421,430508..430552,430633..430707,430884..430931,431015..431051,431160..431248,432197..432244,432350..432409,433255..433323,433438..433455))
location: region:429341-433455:-1
so has part: feature:433438-433455:-1:exon
so has part: feature:433255-433323:-1:exon
so has part: feature:432350-432409:-1:exon
so has part: feature:432197-432244:-1:exon
so has part: feature:431160-431248:-1:exon
so has part: feature:431015-431051:-1:exon
so has part: feature:430884-430931:-1:exon
so has part: feature:430633-430707:-1:exon
so has part: feature:430508-430552:-1:exon
so has part: feature:430360-430421:-1:exon
so has part: feature:429503-429575:-1:exon
so has part: feature:429341-429412:-1:exon

XP_018835982.1
type: Protein
SIO_000068: ncbiprotein

position:429341:-1
position: 429341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433455:-1
position: 433455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433438-433455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433255-433323:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432350-432409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432197-432244:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431160-431248:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:431015-431051:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:430884-430931:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:430633-430707:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:430508-430552:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:430360-430421:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:429503-429575:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:429341-429412:-1:exon

LOC109002597
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 439414..445714
location: region:439414-445714:1
so has part: feature:439414-445714:1:exon
subclass of: SO_0000010

109002597
type: Gene
SIO_000068: ncbigene

position:439414:1
position: 439414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445714:1
position: 445714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439414-445714:1:exon

LOC109002597
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002597
product: CTL-like protein DDB_G0274487, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_018980426.2
SIO_010081: LOC109002597
subclass of: SO_0000673
so part of: LOC109002597
location: join(439414..439872,440343..440803,442175..442358,442475..442699,443787..444020,445316..445714)
location: region:439414-445714:1
so has part: feature:439414-439872:1:exon
so has part: feature:440343-440803:1:exon
so has part: feature:442175-442358:1:exon
so has part: feature:442475-442699:1:exon
so has part: feature:443787-444020:1:exon
so has part: feature:445316-445714:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:439414-439872:1:exon

position:439872:1
position: 439872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:440343-440803:1:exon

position:440343:1
position: 440343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440803:1
position: 440803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:442175-442358:1:exon

position:442175:1
position: 442175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442358:1
position: 442358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:442475-442699:1:exon

position:442475:1
position: 442475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442699:1
position: 442699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:443787-444020:1:exon

position:443787:1
position: 443787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444020:1
position: 444020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:445316-445714:1:exon

position:445316:1
position: 445316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109002597
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002597
product: CTL-like protein DDB_G0274487, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_018980417.2
SIO_010081: LOC109002597
subclass of: SO_0000673
so part of: LOC109002597
location: join(439417..439872,440343..440803,442175..442358,442475..442699,442789..442905,443787..444020,445316..445714)
location: region:439417-445714:1
so has part: feature:439417-439872:1:exon
so has part: feature:440343-440803:1:exon
so has part: feature:442175-442358:1:exon
so has part: feature:442475-442699:1:exon
so has part: feature:442789-442905:1:exon
so has part: feature:443787-444020:1:exon
so has part: feature:445316-445714:1:exon

position:439417:1
position: 439417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439417-439872:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440343-440803:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:442175-442358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442475-442699:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:442789-442905:1:exon

position:442789:1
position: 442789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442905:1
position: 442905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:443787-444020:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:445316-445714:1:exon

LOC109002597
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CTL-like protein DDB_G0274487 isoform X1
translation: MIDSQSSNYSFDSASISATDQNVVRSRRSCDGGQMLASAPSRRWRDIFWLAVFMIHLVVMGFSLVVLGLNRFEKTDRLNIDKYTNGSMEQHKGLTENYWPMYAVAGGVGTALGCTWLFLLGSHANVMMKVSVHILTTYLAVISVLCFWGELFLWGVVFATGAALQFLYVISVIDRLPFTMLVLQKAVKMVWSLPEVMRVAYVFMFVMLLWVELWSFGAAGVVASSMDVGRCWWLLLVLSVSLFWTGAVLCNALHVIVSGMVFLVLIHGGRESSSIPPSSLMKSLRYAVTTSFGSICYGSLFTAAIRMLRWEIRGVRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVTGKSFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGILLGGLVTGTCSGVWTWIKWTDRVSMVGSTAMLMGMVLVGLAMVVVESAVTSIYICYAEDPLLIQRWDSEFFDQMSEMLHQRLQYRSARARKVLTQNRLDGHIQEIPPA
SIO_010081: LOC109002597
subclass of: SO_0000673
so part of: LOC109002597
location: join(439810..439872,440343..440803,442175..442358,442475..442699,442789..442905,443787..444020,445316..445531)
location: region:439810-445531:1
so has part: feature:439810-439872:1:exon
so has part: feature:440343-440803:1:exon
so has part: feature:442175-442358:1:exon
so has part: feature:442475-442699:1:exon
so has part: feature:442789-442905:1:exon
so has part: feature:443787-444020:1:exon
so has part: feature:445316-445531:1:exon

XP_018835962.1
type: Protein
SIO_000068: ncbiprotein

position:439810:1
position: 439810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445531:1
position: 445531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439810-439872:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440343-440803:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:442175-442358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442475-442699:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:442789-442905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:443787-444020:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:445316-445531:1:exon

LOC109002597
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CTL-like protein DDB_G0274487 isoform X2
translation: MIDSQSSNYSFDSASISATDQNVVRSRRSCDGGQMLASAPSRRWRDIFWLAVFMIHLVVMGFSLVVLGLNRFEKTDRLNIDKYTNGSMEQHKGLTENYWPMYAVAGGVGTALGCTWLFLLGSHANVMMKVSVHILTTYLAVISVLCFWGELFLWGVVFATGAALQFLYVISVIDRLPFTMLVLQKAVKMVWSLPEVMRVAYVFMFVMLLWVELWSFGAAGVVASSMDVGRCWWLLLVLSVSLFWTGAVLCNALHVIVSGMVFLVLIHGGRESSSIPPSSLMKSLRYAVTTSFGSICYGSLFTAAIRMLRWEIAVTGKSFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGILLGGLVTGTCSGVWTWIKWTDRVSMVGSTAMLMGMVLVGLAMVVVESAVTSIYICYAEDPLLIQRWDSEFFDQMSEMLHQRLQYRSARARKVLTQNRLDGHIQEIPPA
SIO_010081: LOC109002597
subclass of: SO_0000673
so part of: LOC109002597
location: join(439810..439872,440343..440803,442175..442358,442475..442699,443787..444020,445316..445531)
location: region:439810-445531:1
so has part: feature:439810-439872:1:exon
so has part: feature:440343-440803:1:exon
so has part: feature:442175-442358:1:exon
so has part: feature:442475-442699:1:exon
so has part: feature:443787-444020:1:exon
so has part: feature:445316-445531:1:exon

XP_018835971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439810-439872:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440343-440803:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:442175-442358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442475-442699:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:443787-444020:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:445316-445531:1:exon

LOC108984345
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108984345
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 446975..452008
location: region:446975-452008:1
so has part: feature:446975-452008:1:exon
subclass of: SO_0000010

108984345
type: Gene
SIO_000068: ncbigene

position:446975:1
position: 446975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452008:1
position: 452008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446975-452008:1:exon

LOC108984345
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108984345
product: transcription factor PERIANTHIA-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035685903.1
SIO_010081: LOC108984345
subclass of: SO_0000673
so part of: LOC108984345
location: join(446975..447223,447384..447487,447597..447646,447769..447945,449400..449477,449570..449629,450094..450171,450293..450350,450643..450914,450991..451236,451398..451522,451623..452008)
location: region:446975-452008:1
so has part: feature:446975-447223:1:exon
so has part: feature:447384-447487:1:exon
so has part: feature:447597-447646:1:exon
so has part: feature:447769-447945:1:exon
so has part: feature:449400-449477:1:exon
so has part: feature:449570-449629:1:exon
so has part: feature:450094-450171:1:exon
so has part: feature:450293-450350:1:exon
so has part: feature:450643-450914:1:exon
so has part: feature:450991-451236:1:exon
so has part: feature:451398-451522:1:exon
so has part: feature:451623-452008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:446975-447223:1:exon

position:447223:1
position: 447223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:447384-447487:1:exon

position:447384:1
position: 447384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447487:1
position: 447487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:447597-447646:1:exon

position:447597:1
position: 447597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447646:1
position: 447646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:447769-447945:1:exon

position:447769:1
position: 447769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447945:1
position: 447945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:449400-449477:1:exon

position:449400:1
position: 449400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449477:1
position: 449477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:449570-449629:1:exon

position:449570:1
position: 449570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449629:1
position: 449629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:450094-450171:1:exon

position:450094:1
position: 450094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450171:1
position: 450171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:450293-450350:1:exon

position:450293:1
position: 450293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450350:1
position: 450350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:450643-450914:1:exon

position:450643:1
position: 450643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450914:1
position: 450914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:450991-451236:1:exon

position:450991:1
position: 450991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451236:1
position: 451236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:451398-451522:1:exon

position:451398:1
position: 451398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451522:1
position: 451522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:451623-452008:1:exon

position:451623:1
position: 451623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108984345
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108984345
product: transcription factor PERIANTHIA-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_035685902.1
SIO_010081: LOC108984345
subclass of: SO_0000673
so part of: LOC108984345
location: join(446975..447223,447384..447487,447597..447646,447769..447945,449400..449477,449570..449629,450094..450171,450293..450350,450643..450914,450991..451236,451398..452007)
location: region:446975-452007:1
so has part: feature:446975-447223:1:exon
so has part: feature:447384-447487:1:exon
so has part: feature:447597-447646:1:exon
so has part: feature:447769-447945:1:exon
so has part: feature:449400-449477:1:exon
so has part: feature:449570-449629:1:exon
so has part: feature:450094-450171:1:exon
so has part: feature:450293-450350:1:exon
so has part: feature:450643-450914:1:exon
so has part: feature:450991-451236:1:exon
so has part: feature:451398-452007:1:exon

position:452007:1
position: 452007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446975-447223:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:447384-447487:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:447597-447646:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:447769-447945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:449400-449477:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449570-449629:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450094-450171:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:450293-450350:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:450643-450914:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:450991-451236:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:451398-452007:1:exon

LOC108984345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108984345
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor TGA2.3-like isoform X2
translation: MQSFKAALANHLQLYCHSSFNLRGDGSGRDQTRFTDLGELEHSAAAFHHNEPVDLSPVSFAVLPNNLHYGTLNTSIGCVDTGQQFMYQKGTTTIGATLGNGQHIENWGESGMAADTSQQTDTSTDIDTDDKNKFHGVHNGSLMVVDSVDQSKAKAADQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRTRQQGAFSATGYSGDHIHSINGNGSLAFDMDYARWLDEHNRLINDLRLALNSHMGDNELDVLVDGVMVHYDEIFRLKSIGAKADVFHMLSGMWKTPAERCFMWLGGFRSSELLKILGNHLEPLTEQQLMGICNLQQSSQQAEDALSQGMEALQQSLVETLSSTSLGSGGSGNVADYMGQMAIAMGKLATLENFLHQADLLRQQTLQQMHRILTTRQAACALLVISDYISRVRALSSLC
SIO_010081: LOC108984345
subclass of: SO_0000673
so part of: LOC108984345
location: join(447156..447223,447384..447487,447597..447646,447769..447945,449400..449477,449570..449629,450094..450171,450293..450350,450643..450914,450991..451236,451398..451522,451623..451626)
location: region:447156-451626:1
so has part: feature:447156-447223:1:exon
so has part: feature:447384-447487:1:exon
so has part: feature:447597-447646:1:exon
so has part: feature:447769-447945:1:exon
so has part: feature:449400-449477:1:exon
so has part: feature:449570-449629:1:exon
so has part: feature:450094-450171:1:exon
so has part: feature:450293-450350:1:exon
so has part: feature:450643-450914:1:exon
so has part: feature:450991-451236:1:exon
so has part: feature:451398-451522:1:exon
so has part: feature:451623-451626:1:exon

XP_035541796.1
type: Protein
SIO_000068: ncbiprotein

position:447156:1
position: 447156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451626:1
position: 451626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447156-447223:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:447384-447487:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:447597-447646:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:447769-447945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:449400-449477:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449570-449629:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450094-450171:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:450293-450350:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:450643-450914:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:450991-451236:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:451398-451522:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:451623-451626:1:exon

LOC108984345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108984345
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor TGA2.3-like isoform X1
translation: MQSFKAALANHLQLYCHSSFNLRGDGSGRDQTRFTDLGELEHSAAAFHHNEPVDLSPVSFAVLPNNLHYGTLNTSIGCVDTGQQFMYQKGTTTIGATLGNGQHIENWGESGMAADTSQQTDTSTDIDTDDKNKFHGVHNGSLMVVDSVDQSKAKAADQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRTRQQGAFSATGYSGDHIHSINGNGSLAFDMDYARWLDEHNRLINDLRLALNSHMGDNELDVLVDGVMVHYDEIFRLKSIGAKADVFHMLSGMWKTPAERCFMWLGGFRSSELLKILGNHLEPLTEQQLMGICNLQQSSQQAEDALSQGMEALQQSLVETLSSTSLGSGGSGNVADYMGQMAIAMGKLATLENFLHQADLLRQQTLQQMHRILTTRQAACALLVISDYISRVRALSSLWLARPRE
SIO_010081: LOC108984345
subclass of: SO_0000673
so part of: LOC108984345
location: join(447156..447223,447384..447487,447597..447646,447769..447945,449400..449477,449570..449629,450094..450171,450293..450350,450643..450914,450991..451236,451398..451544)
location: region:447156-451544:1
so has part: feature:447156-447223:1:exon
so has part: feature:447384-447487:1:exon
so has part: feature:447597-447646:1:exon
so has part: feature:447769-447945:1:exon
so has part: feature:449400-449477:1:exon
so has part: feature:449570-449629:1:exon
so has part: feature:450094-450171:1:exon
so has part: feature:450293-450350:1:exon
so has part: feature:450643-450914:1:exon
so has part: feature:450991-451236:1:exon
so has part: feature:451398-451544:1:exon

XP_035541795.1
type: Protein
SIO_000068: ncbiprotein

position:451544:1
position: 451544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447156-447223:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:447384-447487:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:447597-447646:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:447769-447945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:449400-449477:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449570-449629:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450094-450171:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:450293-450350:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:450643-450914:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:450991-451236:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:451398-451544:1:exon

LOC108984345
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108984345
product: transcription factor PERIANTHIA-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_035685904.1
SIO_010081: LOC108984345
subclass of: SO_0000673
so part of: LOC108984345
location: join(448994..449310,449400..449477,449570..449629,450094..450171,450293..450350,450643..450914,450991..451236,451398..452007)
location: region:448994-452007:1
so has part: feature:448994-449310:1:exon
so has part: feature:449400-449477:1:exon
so has part: feature:449570-449629:1:exon
so has part: feature:450094-450171:1:exon
so has part: feature:450293-450350:1:exon
so has part: feature:450643-450914:1:exon
so has part: feature:450991-451236:1:exon
so has part: feature:451398-452007:1:exon

position:448994:1
position: 448994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448994-449310:1:exon

position:449310:1
position: 449310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:449400-449477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449570-449629:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450094-450171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450293-450350:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450643-450914:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450991-451236:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:451398-452007:1:exon

LOC108984345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108984345
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor PERIANTHIA-like isoform X3
translation: MVVDSVDQSKAKAADQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRTRQQGAFSATGYSGDHIHSINGNGSLAFDMDYARWLDEHNRLINDLRLALNSHMGDNELDVLVDGVMVHYDEIFRLKSIGAKADVFHMLSGMWKTPAERCFMWLGGFRSSELLKILGNHLEPLTEQQLMGICNLQQSSQQAEDALSQGMEALQQSLVETLSSTSLGSGGSGNVADYMGQMAIAMGKLATLENFLHQADLLRQQTLQQMHRILTTRQAACALLVISDYISRVRALSSLWLARPRE
SIO_010081: LOC108984345
subclass of: SO_0000673
so part of: LOC108984345
location: join(449427..449477,449570..449629,450094..450171,450293..450350,450643..450914,450991..451236,451398..451544)
location: region:449427-451544:1
so has part: feature:449427-449477:1:exon
so has part: feature:449570-449629:1:exon
so has part: feature:450094-450171:1:exon
so has part: feature:450293-450350:1:exon
so has part: feature:450643-450914:1:exon
so has part: feature:450991-451236:1:exon
so has part: feature:451398-451544:1:exon

XP_035541797.1
type: Protein
SIO_000068: ncbiprotein

position:449427:1
position: 449427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449427-449477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449570-449629:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450094-450171:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450293-450350:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450643-450914:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450991-451236:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451398-451544:1:exon

LOC109002569
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109002569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 452627..454211
location: region:452627-454211:1
so has part: feature:452627-454211:1:exon
subclass of: SO_0000010

109002569
type: Gene
SIO_000068: ncbigene

position:452627:1
position: 452627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454211:1
position: 454211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452627-454211:1:exon

LOC109002569
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109002569
product: protein PLANT CADMIUM RESISTANCE 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018980368.2
SIO_010081: LOC109002569
subclass of: SO_0000673
so part of: LOC109002569
location: join(452627..452840,453456..453527,453641..453853,454132..454211)
location: region:452627-454211:1
so has part: feature:452627-452840:1:exon
so has part: feature:453456-453527:1:exon
so has part: feature:453641-453853:1:exon
so has part: feature:454132-454211:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452627-452840:1:exon

position:452840:1
position: 452840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:453456-453527:1:exon

position:453456:1
position: 453456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453527:1
position: 453527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:453641-453853:1:exon

position:453641:1
position: 453641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453853:1
position: 453853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:454132-454211:1:exon

position:454132:1
position: 454132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109002569
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109002569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein PLANT CADMIUM RESISTANCE 2-like
translation: MEEPSAPPQPPPLSSDFQRTPTTVGFPVTASIINQENSASVRPTTASSDLNSHSPVPWSSGLCDCCDDVSSCCLTCWCPCVTFGRIAEIVDRGSTSCGVSGALYTLILCVTGCSCLYSCFYRSKLRGQYFLEESPCTDCCVHCFCQECALCQEYRELKHHGFDTSIGWHGNVERQKRIAATNPPAVQGGMTR
SIO_010081: LOC109002569
subclass of: SO_0000673
so part of: LOC109002569
location: join(452627..452840,453456..453527,453641..453853,454132..454211)
location: region:452627-454211:1
so has part: feature:452627-452840:1:exon
so has part: feature:453456-453527:1:exon
so has part: feature:453641-453853:1:exon
so has part: feature:454132-454211:1:exon

XP_018835913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452627-452840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:453456-453527:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:453641-453853:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454132-454211:1:exon

LOC108994181
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108994181
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(463614..482517)
location: region:463614-482517:-1
so has part: feature:463614-482517:-1:exon
subclass of: SO_0000010

108994181
type: Gene
SIO_000068: ncbigene

position:463614:-1
position: 463614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482517:-1
position: 482517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463614-482517:-1:exon

LOC108994181
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108994181
product: aluminum-activated malate transporter 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018969301.2
SIO_010081: LOC108994181
subclass of: SO_0000673
so part of: LOC108994181
location: complement(join(463614..464612,465766..465912,466004..466140,466259..466528,466640..466777,467413..467795,481234..481262,481360..481409,482011..482075,482472..482517))
location: region:463614-482517:-1
so has part: feature:482472-482517:-1:exon
so has part: feature:482011-482075:-1:exon
so has part: feature:481360-481409:-1:exon
so has part: feature:481234-481262:-1:exon
so has part: feature:467413-467795:-1:exon
so has part: feature:466640-466777:-1:exon
so has part: feature:466259-466528:-1:exon
so has part: feature:466004-466140:-1:exon
so has part: feature:465766-465912:-1:exon
so has part: feature:463614-464612:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:482472-482517:-1:exon

position:482472:-1
position: 482472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:482011-482075:-1:exon

position:482011:-1
position: 482011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482075:-1
position: 482075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:481360-481409:-1:exon

position:481360:-1
position: 481360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481409:-1
position: 481409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:481234-481262:-1:exon

position:481234:-1
position: 481234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481262:-1
position: 481262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:467413-467795:-1:exon

position:467413:-1
position: 467413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467795:-1
position: 467795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:466640-466777:-1:exon

position:466640:-1
position: 466640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466777:-1
position: 466777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:466259-466528:-1:exon

position:466259:-1
position: 466259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466528:-1
position: 466528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:466004-466140:-1:exon

position:466004:-1
position: 466004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466140:-1
position: 466140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:465766-465912:-1:exon

position:465766:-1
position: 465766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465912:-1
position: 465912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:463614-464612:-1:exon

position:464612:-1
position: 464612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC108994181
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108994181
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aluminum-activated malate transporter 4-like
translation: MLKRHTGEELALEVYGRSLDEKNLSDVTPMLLQLLGQKMATKIGSFRHSFAERSKERLLSRKAYSELGLGSSYGGEDDGVKGRFFRRLSDGILNFWAGLRETSVKLYEMGRSDPRKLLFAAKMGISLALVSLVIFLKDPLKDVNQYSIWAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLALGIAEVSTRAGNLEEVIIVISIFIAGFCASYTKLYPPMKSYEYGFRVFLLTFCIVLVSGNSSSQFLQTAFYRLLLIAIGAGICLVVNICLYPIWSGEDLHKLVVKNFQGVATSLEGCVSGYLNCVEYERVPSKILTYQASDDLLYSGYRSAVQSSSQEESLLDFALWEPPHGPYKGFNYPWRNYAKVSGSLRHCAFMVMAMHGCILSEIQAPAEKRKVFSSELQRVGTEGAKVLLELGSKVEKMEKLSSKDILFEVHEAAEELQMKIDRKSYLLVNSDNWEDVRRAKEFEDPQNFIDVKDNENKGIVISSLSETWDRQNPNISVEPSMPRWISSESVLNKPVSWPLLSITGDTVLHEQESRVYESASSLSLATFSSLLIEFVARLQNLVDEFEELSEKANFKEPLDPSNQAKEAVGFWTRLFRCFH
SIO_010081: LOC108994181
subclass of: SO_0000673
so part of: LOC108994181
location: complement(join(463962..464612,465766..465912,466004..466140,466259..466528,466640..466777,467413..467795,481234..481262,481360..481409,482011..482035))
location: region:463962-482035:-1
so has part: feature:482011-482035:-1:exon
so has part: feature:481360-481409:-1:exon
so has part: feature:481234-481262:-1:exon
so has part: feature:467413-467795:-1:exon
so has part: feature:466640-466777:-1:exon
so has part: feature:466259-466528:-1:exon
so has part: feature:466004-466140:-1:exon
so has part: feature:465766-465912:-1:exon
so has part: feature:463962-464612:-1:exon

XP_018824846.2
type: Protein
SIO_000068: ncbiprotein

position:463962:-1
position: 463962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482035:-1
position: 482035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482011-482035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:481360-481409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481234-481262:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467413-467795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466640-466777:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466259-466528:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:466004-466140:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:465766-465912:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:463962-464612:-1:exon

LOC108994180
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108994180
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(482171..489703)
location: region:482171-489703:-1
so has part: feature:482171-489703:-1:exon
subclass of: SO_0000010

108994180
type: Gene
SIO_000068: ncbigene

position:482171:-1
position: 482171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489703:-1
position: 489703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482171-489703:-1:exon

LOC108994180
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108994180
product: serine/threonine-protein kinase prpf4B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_018969300.2
SIO_010081: LOC108994180
subclass of: SO_0000673
so part of: LOC108994180
location: complement(join(482171..482572,482679..482882,483016..483090,483219..483382,483548..483662,483794..484085,484229..484385,485170..485242,485753..485821,486118..486317,487097..487278,487395..488701,489277..489703))
location: region:482171-489703:-1
so has part: feature:489277-489703:-1:exon
so has part: feature:487395-488701:-1:exon
so has part: feature:487097-487278:-1:exon
so has part: feature:486118-486317:-1:exon
so has part: feature:485753-485821:-1:exon
so has part: feature:485170-485242:-1:exon
so has part: feature:484229-484385:-1:exon
so has part: feature:483794-484085:-1:exon
so has part: feature:483548-483662:-1:exon
so has part: feature:483219-483382:-1:exon
so has part: feature:483016-483090:-1:exon
so has part: feature:482679-482882:-1:exon
so has part: feature:482171-482572:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489277-489703:-1:exon

position:489277:-1
position: 489277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:487395-488701:-1:exon

position:487395:-1
position: 487395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488701:-1
position: 488701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:487097-487278:-1:exon

position:487097:-1
position: 487097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487278:-1
position: 487278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:486118-486317:-1:exon

position:486118:-1
position: 486118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486317:-1
position: 486317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:485753-485821:-1:exon

position:485753:-1
position: 485753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485821:-1
position: 485821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:485170-485242:-1:exon

position:485170:-1
position: 485170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485242:-1
position: 485242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:484229-484385:-1:exon

position:484229:-1
position: 484229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484385:-1
position: 484385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:483794-484085:-1:exon

position:483794:-1
position: 483794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484085:-1
position: 484085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:483548-483662:-1:exon

position:483548:-1
position: 483548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483662:-1
position: 483662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:483219-483382:-1:exon

position:483219:-1
position: 483219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483382:-1
position: 483382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:483016-483090:-1:exon

position:483016:-1
position: 483016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483090:-1
position: 483090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:482679-482882:-1:exon

position:482679:-1
position: 482679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482882:-1
position: 482882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:482171-482572:-1:exon

position:482572:-1
position: 482572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC108994180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108994180
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase prpf4B-like
translation: MASESHDSRRKHRRSSSSEDDAERSSKRHKHHHHHRHRHRSKKRDAEDIIEAPPPPVAIRNSRPDDDVEEGEILEDEGFGLGDGGHEIAERKPQSDDESREIVAVGVTAQSDQQNSGSAEHGSYDAEARIHEGEILGKKGRSLKTLREDKSKDDFLTNSNLDKEDRAYSQSGVDTGIENEVGSPRTLNVEPQNELAYRVTSEGYGNGDLGFKAIKDNKMWQSESWTSYKGSGKEKTHYDDEKVEVYGSKLSNQGKSSSQSTGDTRSRSRSIDHARERSRSLSIREEEAHSKKQHYYGRDASLYADRSKFMYDSDDERMVRLSKDGRHYRRDVEREHNTSSNKYIGEERLQSQSTWERERSKDREMARELRKEKERNRGFEMDKAQRREKERERSRERDRKRGMERYRSKERDVDKDRQDMERDKIKENQVDRHGEREKERDRSRASERERDRDRDRDREREREREMDRDKIWRERDNEREKWNDRNRNRNRGIMIDREKYEYLVDGDRHKNSRHSRYDGKDYHHDRTRKTDSAKVPTSRSDLLEGNREKLQRDDDEQGDYEEGTTLQFAEQEEEDLNRIKEESRRRKQAILEKYKSQQLQQPNQPRSEDTEKDKEPAHDSDQSVAANDVITDTGDGRSDGFDIYVAEPSFSVGKSPPQNGHADLEKTSSAGGLGEGSPKSERSGDKFCDDIFGETPTGVRRLDKVDGLRFERSGLNDNWDDAEGYYGYRFGEILDGRYEVTAAHGKGVFSTVVRAKNLKAGNGEPEEVAIKIIRSNDTMYKAGMEELVILKKLVGADPDDKRHCVRFISSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEITPYLVSRFYRAPEIILGMPYDHPLDIWSVGCCLYEVYTGKVLFPGATNNDMLRLHMELKGPFPKKMLRKGAFSDQHFDQDLSFHATEEDPVTKKAIKRMILNIKPKDISSIITGSPGEDPKMLANFKDLLEKIFVLDPDKRMTVSQALSHPFITGK
SIO_010081: LOC108994180
subclass of: SO_0000673
so part of: LOC108994180
location: complement(join(482694..482882,483016..483090,483219..483382,483548..483662,483794..484085,484229..484385,485170..485242,485753..485821,486118..486317,487097..487278,487395..488701,489277..489624))
location: region:482694-489624:-1
so has part: feature:489277-489624:-1:exon
so has part: feature:487395-488701:-1:exon
so has part: feature:487097-487278:-1:exon
so has part: feature:486118-486317:-1:exon
so has part: feature:485753-485821:-1:exon
so has part: feature:485170-485242:-1:exon
so has part: feature:484229-484385:-1:exon
so has part: feature:483794-484085:-1:exon
so has part: feature:483548-483662:-1:exon
so has part: feature:483219-483382:-1:exon
so has part: feature:483016-483090:-1:exon
so has part: feature:482694-482882:-1:exon

XP_018824845.2
type: Protein
SIO_000068: ncbiprotein

position:482694:-1
position: 482694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489624:-1
position: 489624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489277-489624:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:487395-488701:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:487097-487278:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:486118-486317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485753-485821:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:485170-485242:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:484229-484385:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:483794-484085:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:483548-483662:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:483219-483382:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:483016-483090:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:482694-482882:-1:exon

LOC108982537
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108982537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 498741..503741
location: region:498741-503741:1
so has part: feature:498741-503741:1:exon
subclass of: SO_0000010

108982537
type: Gene
SIO_000068: ncbigene

position:498741:1
position: 498741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503741:1
position: 503741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498741-503741:1:exon

LOC108982537
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108982537
product: protein WHAT'S THIS FACTOR 9, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_018953942.2
SIO_010081: LOC108982537
subclass of: SO_0000673
so part of: LOC108982537
location: join(498741..500529,503259..503741)
location: region:498741-503741:1
so has part: feature:498741-500529:1:exon
so has part: feature:503259-503741:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:498741-500529:1:exon

position:500529:1
position: 500529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:503259-503741:1:exon

position:503259:1
position: 503259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108982537
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108982537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein WHAT'S THIS FACTOR 9, mitochondrial
translation: MQFIFRSLPERFSVSHFDRRRTFVDTTFKWARDRGLDHVVEREKNLRPLLNLKNFIKSEPSKSVPVSIITQNRDSLQIPVRSIDFIRKYPSVFEEFLPGGIGIHPHIRLTPEVLNLDAEEQLVYQSETYKKQAADRVLKLLMISRANKIPLSIVDRLKWDLGLPRDYEKTIFPEFPDYFQIVGDRDSSKGSEDRRVLELVCWSNELATSVMEKMATKGKLDYEKGMAIAFPLQFSRGFEMDKKLKKWEDEWQKLPYISPYENASHLLPKSDESDKWAVAVLHELLHILVSKKTEKDNILHLGEYLGLRSRFKRALLHHPGIFYLSSKIGTYTVVLKEGYKRGLLVENHPLMIMRNRYIHLMNTVKEDSKQINIPAGNSRKKKQTGHDEKGKEEEENDDKSGEEDEQELDDSSDAEVEDASEHEYDNDDRDEEDENESRRGFQKHVVDNRGKKGRKTILGEKGPWRKSESKRAVGKQPVKTREKAPSKVHRRAKMHGSNNVRGSSRERSILPKSRERSLPDKRTFTQ
SIO_010081: LOC108982537
subclass of: SO_0000673
so part of: LOC108982537
location: 498913..500493
location: region:498913-500493:1
so has part: feature:498913-500493:1:exon

XP_018809487.2
type: Protein
SIO_000068: ncbiprotein

position:498913:1
position: 498913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500493:1
position: 500493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498913-500493:1:exon

LOC108982538
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108982538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 504485..510048
location: region:504485-510048:1
so has part: feature:504485-510048:1:exon
subclass of: SO_0000010

108982538
type: Gene
SIO_000068: ncbigene

position:504485:1
position: 504485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510048:1
position: 510048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504485-510048:1:exon

LOC108982538
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51240
gene: LOC108982538
product: probable magnesium transporter NIPA6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001994726.2
SIO_010081: LOC108982538
so part of: LOC108982538
location: join(504485..504767,505193..505249,505347..505437,505649..505809,505883..506010,506225..506362,506467..506589,507584..507712,507792..507909,509527..510048)
location: region:504485-510048:1
so has part: feature:504485-504767:1:exon
so has part: feature:505193-505249:1:exon
so has part: feature:505347-505437:1:exon
so has part: feature:505649-505809:1:exon
so has part: feature:505883-506010:1:exon
so has part: feature:506225-506362:1:exon
so has part: feature:506467-506589:1:exon
so has part: feature:507584-507712:1:exon
so has part: feature:507792-507909:1:exon
so has part: feature:509527-510048:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:504485-504767:1:exon

position:504767:1
position: 504767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:505193-505249:1:exon

position:505193:1
position: 505193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505249:1
position: 505249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:505347-505437:1:exon

position:505347:1
position: 505347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505437:1
position: 505437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:505649-505809:1:exon

position:505649:1
position: 505649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505809:1
position: 505809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:505883-506010:1:exon

position:505883:1
position: 505883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506010:1
position: 506010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:506225-506362:1:exon

position:506225:1
position: 506225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506362:1
position: 506362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:506467-506589:1:exon

position:506467:1
position: 506467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506589:1
position: 506589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:507584-507712:1:exon

position:507584:1
position: 507584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507712:1
position: 507712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:507792-507909:1:exon

position:507792:1
position: 507792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507909:1
position: 507909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:509527-510048:1:exon

position:509527:1
position: 509527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108982538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108982538
product: probable magnesium transporter NIPA6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_035685906.1
SIO_010081: LOC108982538
subclass of: SO_0000673
so part of: LOC108982538
location: join(504485..504767,505193..505249,505347..505437,505649..505809,505883..506010,506225..506362,506467..506589,507620..507702)
location: region:504485-507702:1
so has part: feature:504485-504767:1:exon
so has part: feature:505193-505249:1:exon
so has part: feature:505347-505437:1:exon
so has part: feature:505649-505809:1:exon
so has part: feature:505883-506010:1:exon
so has part: feature:506225-506362:1:exon
so has part: feature:506467-506589:1:exon
so has part: feature:507620-507702:1:exon

position:507702:1
position: 507702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504485-504767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:505193-505249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505347-505437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:505649-505809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505883-506010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:506225-506362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:506467-506589:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:507620-507702:1:exon

position:507620:1
position: 507620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108982538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108982538
product: probable magnesium transporter NIPA6, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_035685907.1
SIO_010081: LOC108982538
subclass of: SO_0000673
so part of: LOC108982538
location: join(504486..504767,505193..505249,505347..505437,505649..505809,505883..506010,506225..506362,507584..507694)
location: region:504486-507694:1
so has part: feature:504486-504767:1:exon
so has part: feature:505193-505249:1:exon
so has part: feature:505347-505437:1:exon
so has part: feature:505649-505809:1:exon
so has part: feature:505883-506010:1:exon
so has part: feature:506225-506362:1:exon
so has part: feature:507584-507694:1:exon

position:504486:1
position: 504486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507694:1
position: 507694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504486-504767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:505193-505249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505347-505437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:505649-505809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505883-506010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:506225-506362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:507584-507694:1:exon

LOC108982538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108982538
product: probable magnesium transporter NIPA6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_018953945.2
SIO_010081: LOC108982538
subclass of: SO_0000673
so part of: LOC108982538
location: join(504490..504767,505193..505249,505347..505437,505649..505809,505901..506010,506225..506362,507620..507712,507792..507909,509527..510048)
location: region:504490-510048:1
so has part: feature:504490-504767:1:exon
so has part: feature:505193-505249:1:exon
so has part: feature:505347-505437:1:exon
so has part: feature:505649-505809:1:exon
so has part: feature:505901-506010:1:exon
so has part: feature:506225-506362:1:exon
so has part: feature:507620-507712:1:exon
so has part: feature:507792-507909:1:exon
so has part: feature:509527-510048:1:exon

position:504490:1
position: 504490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504490-504767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:505193-505249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505347-505437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:505649-505809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505901-506010:1:exon

position:505901:1
position: 505901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:506225-506362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:507620-507712:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:507792-507909:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:509527-510048:1:exon

LOC108982538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108982538
product: probable magnesium transporter NIPA6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_018953944.2
SIO_010081: LOC108982538
subclass of: SO_0000673
so part of: LOC108982538
location: join(504492..504767,505193..505249,505347..505437,505649..505809,505883..506010,506225..506362,507620..507712,507792..507909,509527..510048)
location: region:504492-510048:1
so has part: feature:504492-504767:1:exon
so has part: feature:505193-505249:1:exon
so has part: feature:505347-505437:1:exon
so has part: feature:505649-505809:1:exon
so has part: feature:505883-506010:1:exon
so has part: feature:506225-506362:1:exon
so has part: feature:507620-507712:1:exon
so has part: feature:507792-507909:1:exon
so has part: feature:509527-510048:1:exon

position:504492:1
position: 504492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504492-504767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:505193-505249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505347-505437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:505649-505809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505883-506010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:506225-506362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:507620-507712:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:507792-507909:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:509527-510048:1:exon

LOC108982538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108982538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable magnesium transporter NIPA6 isoform X1
translation: MAASLVIEASVSTSFADNLKGFILALVSSAFIGSSFIIKKLGLQRAGASGPRASSGGYGYLKEPFWWVGMVTMIVGELANFVAYMFAPAVLVTPLGALSIIVSAVLAHFFLKEKLRKMGIVGCVLCIVGSTLIVLHAPSELSLSSVEEIWELATQPVFLLYTASAIAVVLVLILYCEPRFGQTNILVYIGVCSIIGSLTVMSIKAVGIAIKLTLEGSSQAGSFQTWVFVMVAITCIITQLNYLNKALDTFKTTVVSPIYYALFTSLTIFASAIMFKDWSGQSASSIVSVLCGFITVLSGTLVLHSTSDRDPTSVADIYASLSPQVSWFVHENGEIWKQNADDELCPDFDAIIKQDHFK
SIO_010081: LOC108982538
subclass of: SO_0000673
so part of: LOC108982538
location: join(504608..504767,505193..505249,505347..505437,505649..505809,505883..506010,506225..506362,507620..507712,507792..507909,509527..509657)
location: region:504608-509657:1
so has part: feature:504608-504767:1:exon
so has part: feature:505193-505249:1:exon
so has part: feature:505347-505437:1:exon
so has part: feature:505649-505809:1:exon
so has part: feature:505883-506010:1:exon
so has part: feature:506225-506362:1:exon
so has part: feature:507620-507712:1:exon
so has part: feature:507792-507909:1:exon
so has part: feature:509527-509657:1:exon

XP_018809489.2
type: Protein
SIO_000068: ncbiprotein

position:504608:1
position: 504608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509657:1
position: 509657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504608-504767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:505193-505249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505347-505437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:505649-505809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505883-506010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:506225-506362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:507620-507712:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:507792-507909:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:509527-509657:1:exon

LOC108982538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108982538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable magnesium transporter NIPA6 isoform X2
translation: MAASLVIEASVSTSFADNLKGFILALVSSAFIGSSFIIKKLGLQRAGASGPRASSGGYGYLKEPFWWVGMVTMIVGELANFVAYMFAPAVLVTPLGALSIIVSAVLAHFFLKEKLRKMGIVGCVLCIVGSTLIVLHAPSELSLSSVEEIWELATQPASAIAVVLVLILYCEPRFGQTNILVYIGVCSIIGSLTVMSIKAVGIAIKLTLEGSSQAGSFQTWVFVMVAITCIITQLNYLNKALDTFKTTVVSPIYYALFTSLTIFASAIMFKDWSGQSASSIVSVLCGFITVLSGTLVLHSTSDRDPTSVADIYASLSPQVSWFVHENGEIWKQNADDELCPDFDAIIKQDHFK
SIO_010081: LOC108982538
subclass of: SO_0000673
so part of: LOC108982538
location: join(504608..504767,505193..505249,505347..505437,505649..505809,505901..506010,506225..506362,507620..507712,507792..507909,509527..509657)
location: region:504608-509657:1
so has part: feature:504608-504767:1:exon
so has part: feature:505193-505249:1:exon
so has part: feature:505347-505437:1:exon
so has part: feature:505649-505809:1:exon
so has part: feature:505901-506010:1:exon
so has part: feature:506225-506362:1:exon
so has part: feature:507620-507712:1:exon
so has part: feature:507792-507909:1:exon
so has part: feature:509527-509657:1:exon

XP_018809490.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504608-504767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:505193-505249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505347-505437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:505649-505809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505901-506010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:506225-506362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:507620-507712:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:507792-507909:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:509527-509657:1:exon

LOC108982538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108982538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable magnesium transporter NIPA6 isoform X4
translation: MAASLVIEASVSTSFADNLKGFILALVSSAFIGSSFIIKKLGLQRAGASGPRASSGGYGYLKEPFWWVGMVTMIVGELANFVAYMFAPAVLVTPLGALSIIVSAVLAHFFLKEKLRKMGIVGCVLCIVGSTLIVLHAPSELSLSSVEEIWELATQPVFLLYTASAIAVVLVLILYCEPRFGQTNILVYIGVCSIIGSLTVMSIKAVGIAIKLTLEGSSQAGSFQTWVFVMVAITCIITQLNYLNKF
SIO_010081: LOC108982538
subclass of: SO_0000673
so part of: LOC108982538
location: join(504608..504767,505193..505249,505347..505437,505649..505809,505883..506010,506225..506362,507584..507589)
location: region:504608-507589:1
so has part: feature:504608-504767:1:exon
so has part: feature:505193-505249:1:exon
so has part: feature:505347-505437:1:exon
so has part: feature:505649-505809:1:exon
so has part: feature:505883-506010:1:exon
so has part: feature:506225-506362:1:exon
so has part: feature:507584-507589:1:exon

XP_035541800.1
type: Protein
SIO_000068: ncbiprotein

position:507589:1
position: 507589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504608-504767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:505193-505249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505347-505437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:505649-505809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505883-506010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:506225-506362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:507584-507589:1:exon

LOC108982538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108982538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable magnesium transporter NIPA6 isoform X3
translation: MAASLVIEASVSTSFADNLKGFILALVSSAFIGSSFIIKKLGLQRAGASGPRASSGGYGYLKEPFWWVGMVTMIVGELANFVAYMFAPAVLVTPLGALSIIVSAVLAHFFLKEKLRKMGIVGCVLCIVGSTLIVLHAPSELSLSSVEEIWELATQPVFLLYTASAIAVVLVLILYCEPRFGQTNILVYIGVCSIIGSLTVMSIKAVGIAIKLTLEGSSQAGSFQTWVFVMVAITCIITQLNYLNKGAPVNVMKLCYRGVPACIFFFWCI
SIO_010081: LOC108982538
subclass of: SO_0000673
so part of: LOC108982538
location: join(504608..504767,505193..505249,505347..505437,505649..505809,505883..506010,506225..506362,506467..506541)
location: region:504608-506541:1
so has part: feature:504608-504767:1:exon
so has part: feature:505193-505249:1:exon
so has part: feature:505347-505437:1:exon
so has part: feature:505649-505809:1:exon
so has part: feature:505883-506010:1:exon
so has part: feature:506225-506362:1:exon
so has part: feature:506467-506541:1:exon

XP_035541799.1
type: Protein
SIO_000068: ncbiprotein

position:506541:1
position: 506541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504608-504767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:505193-505249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505347-505437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:505649-505809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505883-506010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:506225-506362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:506467-506541:1:exon

LOC108982529
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108982529
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 510803..513637
location: region:510803-513637:1
so has part: feature:510803-513637:1:exon
subclass of: SO_0000010

108982529
type: Gene
SIO_000068: ncbigene

position:510803:1
position: 510803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513637:1
position: 513637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510803-513637:1:exon

LOC108982529
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108982529
product: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018953932.2
SIO_010081: LOC108982529
subclass of: SO_0000673
so part of: LOC108982529
location: 510803..513637
location: region:510803-513637:1
so has part: feature:510803-513637:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510803-513637:1:exon

LOC108982529
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108982529
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300
translation: MTLQIQSLLLLQLLSIVILFLPTILLAVTTISPGSTLYASNTSQIWSSPNNTFSFGFIPLNPPNSPPFLAAIVYSGGIPIWSAGTTPVDSAGYFQFHPTAGDLRLVNGSGHTVWNSSTVGLGVSSASLDDHGNLVLMRNGAFPVWSSFDHPTDTIVPWQNFSTRNSLRNGLFSFGLLEYGNITLKWDDTTVYWSRRLGSSHGENLTSPSLGLLSNGTLSVFDRSIPGMAIIAYSNDHDEGSDMLRFLRLDNDGNLRIYSTARGSGTLTVRWVAVEDQCRVFGYCGDMGICSYNGTNPICTCPSENFEQVDPKDSRKGCQRKLKTEDCPGNLTMLVMEHTLFLTYPPQSIFAVEGSQVFFVGISACNSNCLVNPICDASTILSDGTGMCYYKIPGFITGYYNPALPSTSYVKVCSPAVQNPLPYVQKVVRKGDGRMQARAVSTVLLGSVLGWLALVHTLWWWWSSTKVGRLSGKHALLEYASCAPIQFSYRELQRSTKGFSDKLGSGGFGAVYRGTLANRMVVAVKRLEEMEQQGERQFRMQVATISSTHHLNLVRLIGFCCEGRHRLLVYEFMQNKSLDTCLFQTGDEKLESKLLSWESRFNIALGIARGITYLHDECRDCTVHCNIKPENILLDENYTAKVSDFGLAKLDHHMHRTMTSVIGTRGYLAPEWLANLPLTTKSDVYSFGMVLLEIVSGRRNFEVSAETNWKRFSLWAYEEFEKGNVNGVLDGRLMGNHHHEMEVDMEEVVRAIQVSFLCIQEQPSRRPRIGKVVQMLQGITRIDWPPVH
SIO_010081: LOC108982529
subclass of: SO_0000673
so part of: LOC108982529
location: 511042..513408
location: region:511042-513408:1
so has part: feature:511042-513408:1:exon

XP_018809477.1
type: Protein
SIO_000068: ncbiprotein

position:511042:1
position: 511042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513408:1
position: 513408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511042-513408:1:exon

LOC118344724
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC118344724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 517276..518452
location: region:517276-518452:1
so has part: feature:517276-518452:1:exon
subclass of: SO_0000010

118344724
type: Gene
SIO_000068: ncbigene

position:517276:1
position: 517276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518452:1
position: 518452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517276-518452:1:exon

LOC118344724
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC118344724
product: uncharacterized LOC118344724
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_035686039.1
SIO_010081: LOC118344724
subclass of: SO_0000673
so part of: LOC118344724
location: join(517276..517984,518079..518452)
location: region:517276-518452:1
so has part: feature:517276-517984:1:exon
so has part: feature:518079-518452:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:517276-517984:1:exon

position:517984:1
position: 517984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:518079-518452:1:exon

position:518079:1
position: 518079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118344724
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC118344724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118344724
translation: MANKWWKSTRALVQLELGEAVPITWEHFKKIFLDHFFPQTLQESRARQFMDLTQGSMTVAQYATTFMELSRFAIYLIPDEEKKAEKFERGLDRRIRERVRTLRIRSFTELVTRATIAEEDLQENIEYNNQRKRQQQQQPQAVSHKDKRPHIMNRQGQPPAGQTYPTCATCGKRHLGRCMFGQNVCFKCGKPNHLARDCPVKKPGEPGRNGGQKTHATARVYALTPIDAEASNDVVTGTLSLFSRHASILFDYGATHSFISNHYAHLAEKIPEPLEPSMSVATPSGDHIICDSVLIGCPIEIQGRILPADLIVFDMSGFDVILGMDWLSQNHACVDCFNKRNAQMGRSLVFSLYEKLPLLV
SIO_010081: LOC118344724
subclass of: SO_0000673
so part of: LOC118344724
location: join(517276..517984,518079..518452)
location: region:517276-518452:1
so has part: feature:517276-517984:1:exon
so has part: feature:518079-518452:1:exon

XP_035541932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517276-517984:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518079-518452:1:exon

LOC108994164
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108994164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(519908..520612)
location: region:519908-520612:-1
so has part: feature:519908-520612:-1:exon
subclass of: SO_0000010

108994164
type: Gene
SIO_000068: ncbigene

position:519908:-1
position: 519908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520612:-1
position: 520612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519908-520612:-1:exon

LOC108994164
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108994164
product: E3 ubiquitin-protein ligase RNF12-B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_018969283.2
SIO_010081: LOC108994164
subclass of: SO_0000673
so part of: LOC108994164
location: complement(519908..520612)
location: region:519908-520612:-1
so has part: feature:519908-520612:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:519908-520612:-1:exon

LOC108994164
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108994164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF12-B-like
translation: MAGSTNNVYLHLSEATAQSSEADLTVGRVEVRFADAGFQNLWRSIMNRDGVLDPFDYHMSPSPTSTFVIQVPAHLFPYPDQHSQYLQTEISSSLIDLIGPENPNHLNVARNIASFAMRHFEDSAEASARGSRSGYSIVAEVRMLQSEVWFDEIFDAADRESAIEKLIDKGRLVASKVNDEDHELGTCGICIEDFSSSIGAELLRMDCSHIYHRDCIILWLAKSNTCPTCRAKLY
SIO_010081: LOC108994164
subclass of: SO_0000673
so part of: LOC108994164
location: complement(519908..520612)
location: region:519908-520612:-1
so has part: feature:519908-520612:-1:exon

XP_018824828.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519908-520612:-1:exon

LOC108982542
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108982542
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 523608..527214
location: region:523608-527214:1
so has part: feature:523608-527214:1:exon
subclass of: SO_0000010

108982542
type: Gene
SIO_000068: ncbigene

position:523608:1
position: 523608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527214:1
position: 527214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523608-527214:1:exon

LOC108982542
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108982542
product: probable arabinosyltransferase ARAD1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_018953952.2
SIO_010081: LOC108982542
subclass of: SO_0000673
so part of: LOC108982542
location: join(523608..524341,525618..525871,526602..527214)
location: region:523608-527214:1
so has part: feature:523608-524341:1:exon
so has part: feature:525618-525871:1:exon
so has part: feature:526602-527214:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:523608-524341:1:exon

position:524341:1
position: 524341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:525618-525871:1:exon

position:525618:1
position: 525618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525871:1
position: 525871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:526602-527214:1:exon

position:526602:1
position: 526602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108982542
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108982542
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: probable arabinosyltransferase ARAD1
translation: MALKNSTITTAIFLPCSVPVLFLALTSLISTLSLTFFFLFSRPDTQLIPRTTHLQSLNSIKVLVADLPRSFNYGLLEKYWSSSVPDARISFDSDRQITSTHLPKNLKFPPYPENPLIKQYSAEYWILGDLMTPDYLRTGSFAQRVYDVDEADVVFVPFFATLSAELQLGTAKGEFNKKVRNEDYERQREVVDLVRKTPAWKRSGGRDHVFVLTDPVAMWHVRAEIAPAILLVVDFGGWYRLDSKSSNGSSPDMIQHTQVSLLKDVIVPYTHLLPRLHLSEDQRRQMLLYFKGAKHRHRGGVVREKLWDLLVNEPGVIMEEGFPNATGREQSIKGMRTSEFCLHPAGDTPTSCRLFDAIQSLCIPVIVSDNIELPFEGMVDYSEFSVFVAVNDALRPNWLVGYLRSLSKEQKDKYRQNMSRIQPIFKYDNGYPGGIGPIPADGAVNHIWQKVHQKLPMIKEAIVRENRKPPGASIPLRCHCT
SIO_010081: LOC108982542
subclass of: SO_0000673
so part of: LOC108982542
location: join(523700..524341,525618..525871,526602..527153)
location: region:523700-527153:1
so has part: feature:523700-524341:1:exon
so has part: feature:525618-525871:1:exon
so has part: feature:526602-527153:1:exon

XP_018809497.2
type: Protein
SIO_000068: ncbiprotein

position:523700:1
position: 523700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527153:1
position: 527153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523700-524341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:525618-525871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526602-527153:1:exon

LOC108982530
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108982530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(527527..528168)
location: region:527527-528168:-1
so has part: feature:527527-528168:-1:exon
subclass of: SO_0000010

108982530
type: Gene
SIO_000068: ncbigene

position:527527:-1
position: 527527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528168:-1
position: 528168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527527-528168:-1:exon

LOC108982530
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108982530
product: protein DMP7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_018953933.2
SIO_010081: LOC108982530
subclass of: SO_0000673
so part of: LOC108982530
location: complement(527527..528168)
location: region:527527-528168:-1
so has part: feature:527527-528168:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527527-528168:-1:exon

LOC108982530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108982530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein DMP7-like
translation: MDDTSIRLDLIESHESEDDYFYLKDDGADEQHCISVINAILSGTARLNVLLPTATILAFTILTPLLTNDGECTSLNRWLMCSFLALSAASCIFFSFTDSFRTATGRLYYGVATFKGIWTFNGGRKKPLVPSDYRLRLADLFHASLSLTAFLTFAALHGDVVLCYYPEMPRKVTNTVPLVVGFVISVFFVVFPSKRRGIGYPFLLQRDALYSRS
SIO_010081: LOC108982530
subclass of: SO_0000673
so part of: LOC108982530
location: complement(527527..528168)
location: region:527527-528168:-1
so has part: feature:527527-528168:-1:exon

XP_018809478.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527527-528168:-1:exon

LOC108982531
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108982531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(530919..532131)
location: region:530919-532131:-1
so has part: feature:530919-532131:-1:exon
subclass of: SO_0000010

108982531
type: Gene
SIO_000068: ncbigene

position:530919:-1
position: 530919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532131:-1
position: 532131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530919-532131:-1:exon

LOC108982531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108982531
product: protein EPIDERMAL PATTERNING FACTOR 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 5 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_018953934.2
SIO_010081: LOC108982531
subclass of: SO_0000673
so part of: LOC108982531
location: complement(join(530919..531608,531714..531778,531918..532131))
location: region:530919-532131:-1
so has part: feature:531918-532131:-1:exon
so has part: feature:531714-531778:-1:exon
so has part: feature:530919-531608:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:531918-532131:-1:exon

position:531918:-1
position: 531918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:531714-531778:-1:exon

position:531714:-1
position: 531714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531778:-1
position: 531778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:530919-531608:-1:exon

position:531608:-1
position: 531608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC108982531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108982531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein EPIDERMAL PATTERNING FACTOR 2
translation: MKNLSLGAHTSFLFLSFFLILITSSTSLRVTNRYFSVSFNEEATNFGDQGHISPKEDAKEEHGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSTESCPIVYRCMCKGKFYHVPSN
SIO_010081: LOC108982531
subclass of: SO_0000673
so part of: LOC108982531
location: complement(join(531417..531608,531714..531778,531918..532017))
location: region:531417-532017:-1
so has part: feature:531918-532017:-1:exon
so has part: feature:531714-531778:-1:exon
so has part: feature:531417-531608:-1:exon

XP_018809479.1
type: Protein
SIO_000068: ncbiprotein

position:531417:-1
position: 531417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532017:-1
position: 532017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531918-532017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531714-531778:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:531417-531608:-1:exon

LOC108982543
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108982543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 534302..536303
location: region:534302-536303:1
so has part: feature:534302-536303:1:exon
subclass of: SO_0000010

108982543
type: Gene
SIO_000068: ncbigene

position:534302:1
position: 534302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536303:1
position: 536303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534302-536303:1:exon

LOC108982543
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108982543
product: transcription termination factor MTERF4, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 5 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018953953.2
SIO_010081: LOC108982543
subclass of: SO_0000673
so part of: LOC108982543
location: 534302..536303
location: region:534302-536303:1
so has part: feature:534302-536303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534302-536303:1:exon

LOC108982543
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108982543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription termination factor MTERF4, chloroplastic
translation: MTSLIRRTKSIKAFLNPAQIPHNLTQTPISTQPHQNQCPPQPQNLNPLRVLQFVTVSTQSSSKFPEYEMPTVTWGVVQGRREKLVSRVIVCDFLKTLGIVPEELEHLELPSTVEVMRERVEFLQKLGLTIDDINEYPLMIGCSVRKNMIPVLGYLEKIGIQRSKMGEFVKNYPQVLHASVVVELAPVVKFLRGVDVEKQDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVCPRDIGPMVTQYPYFLGMRVGTMIKPLVDYLVSLGLPKKILARMLEKRAYILGYDLEETVKPNVECLLSFGIRREALPFIIAQYTQIIGLPLKAKLSVQQYFFNLKLKIDPEGFSQVIEKMPQIVSLNQNVIMKPVEFLLGRGIPSEDVAKMVVKCPQLVALRVELLKNSYYFFKTEMGRPLKELVEFPEYFTYSLESRIKPRYQRLKSRGIRSSLNWLLNCSDLRFEERLQGNYIETESIGPTFCMGGKLELPGNEIVSDEDDESDDEVLYRRTVSL
SIO_010081: LOC108982543
subclass of: SO_0000673
so part of: LOC108982543
location: 534537..536069
location: region:534537-536069:1
so has part: feature:534537-536069:1:exon

XP_018809498.2
type: Protein
SIO_000068: ncbiprotein

position:534537:1
position: 534537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536069:1
position: 536069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534537-536069:1:exon

LOC108982539
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108982539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 539267..544019
location: region:539267-544019:1
so has part: feature:539267-544019:1:exon
subclass of: SO_0000010

108982539
type: Gene
SIO_000068: ncbigene

position:539267:1
position: 539267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544019:1
position: 544019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539267-544019:1:exon

LOC108982539
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108982539
product: IST1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_018953947.2
SIO_010081: LOC108982539
subclass of: SO_0000673
so part of: LOC108982539
location: join(539267..539487,539628..539707,540034..540166,540309..540412,542039..542210,542485..542625,542718..544019)
location: region:539267-544019:1
so has part: feature:539267-539487:1:exon
so has part: feature:539628-539707:1:exon
so has part: feature:540034-540166:1:exon
so has part: feature:540309-540412:1:exon
so has part: feature:542039-542210:1:exon
so has part: feature:542485-542625:1:exon
so has part: feature:542718-544019:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:539267-539487:1:exon

position:539487:1
position: 539487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:539628-539707:1:exon

position:539628:1
position: 539628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539707:1
position: 539707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:540034-540166:1:exon

position:540034:1
position: 540034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540166:1
position: 540166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:540309-540412:1:exon

position:540309:1
position: 540309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540412:1
position: 540412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:542039-542210:1:exon

position:542039:1
position: 542039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542210:1
position: 542210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:542485-542625:1:exon

position:542485:1
position: 542485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542625:1
position: 542625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:542718-544019:1:exon

position:542718:1
position: 542718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108982539
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108982539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog
translation: MSMLDSFFNKGFKAAKCKTLLKLTIPRIKLLRNRRELQIKQMRRDIAKLLETGQEATARIRVEHIVREENMMAAQEIIELFCELIVVRLPIIETQRECPLDLKEAISSVCFAAPRCADLQELLHVQLLFASKYGKEFVSAATELMPDCGVNRQLIELLSVRAPSPEKKLKLLKEIAEEHGLDWDPTASEVEFFKPQDDLLNGPTQFDRESKLPLPREKHDETLFSASEQPHKEQPDSDPGVDSFDLPEVPKESLWPNANVASVPVMVSSLQAAPHPNIDHESSKHSRVIENPSEQPELEPEKMVQERSAAIKNEQPSVPVGGVQDIQFVPFISPSSLSSASFSAAPSKSETSPSRSKSEANVDLQDVVTAARAAVETAERAAAAARSAASLAQLRINELTRKNSDQFPENSSENPFYKDVANQSATEENPHFDHRNLVGNADDVIDSPEPNQDLEDCQRTEASSLPAFGTPKMDFDSSPPIDQGCGNELASHQPQRLTSMDEDPYFSYPNLFTSQNPAAHSSTDNSRFSNEL
SIO_010081: LOC108982539
subclass of: SO_0000673
so part of: LOC108982539
location: join(539658..539707,540034..540166,540309..540412,542039..542210,542485..542625,542718..543716)
location: region:539658-543716:1
so has part: feature:539658-539707:1:exon
so has part: feature:540034-540166:1:exon
so has part: feature:540309-540412:1:exon
so has part: feature:542039-542210:1:exon
so has part: feature:542485-542625:1:exon
so has part: feature:542718-543716:1:exon

XP_018809492.1
type: Protein
SIO_000068: ncbiprotein

position:539658:1
position: 539658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543716:1
position: 543716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539658-539707:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540034-540166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540309-540412:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542039-542210:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542485-542625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542718-543716:1:exon

LOC108982541
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108982541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(545344..554144)
location: region:545344-554144:-1
so has part: feature:545344-554144:-1:exon
subclass of: SO_0000010

108982541
type: Gene
SIO_000068: ncbigene

position:545344:-1
position: 545344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554144:-1
position: 554144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545344-554144:-1:exon

LOC108982541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108982541
product: somatic embryogenesis receptor kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 69 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_018953950.2
SIO_010081: LOC108982541
subclass of: SO_0000673
so part of: LOC108982541
location: complement(join(545344..546045,546538..546932,547176..547517,548184..548315,549675..549787,549873..549944,550089..550160,551446..551589,552209..552280,552785..552917,553740..553827,553895..554144))
location: region:545344-554144:-1
so has part: feature:553895-554144:-1:exon
so has part: feature:553740-553827:-1:exon
so has part: feature:552785-552917:-1:exon
so has part: feature:552209-552280:-1:exon
so has part: feature:551446-551589:-1:exon
so has part: feature:550089-550160:-1:exon
so has part: feature:549873-549944:-1:exon
so has part: feature:549675-549787:-1:exon
so has part: feature:548184-548315:-1:exon
so has part: feature:547176-547517:-1:exon
so has part: feature:546538-546932:-1:exon
so has part: feature:545344-546045:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:553895-554144:-1:exon

position:553895:-1
position: 553895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:553740-553827:-1:exon

position:553740:-1
position: 553740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553827:-1
position: 553827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:552785-552917:-1:exon

position:552785:-1
position: 552785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552917:-1
position: 552917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552209-552280:-1:exon

position:552209:-1
position: 552209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552280:-1
position: 552280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:551446-551589:-1:exon

position:551446:-1
position: 551446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551589:-1
position: 551589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:550089-550160:-1:exon

position:550089:-1
position: 550089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550160:-1
position: 550160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:549873-549944:-1:exon

position:549873:-1
position: 549873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549944:-1
position: 549944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:549675-549787:-1:exon

position:549675:-1
position: 549675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549787:-1
position: 549787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:548184-548315:-1:exon

position:548184:-1
position: 548184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548315:-1
position: 548315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:547176-547517:-1:exon

position:547176:-1
position: 547176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547517:-1
position: 547517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:546538-546932:-1:exon

position:546538:-1
position: 546538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546932:-1
position: 546932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:545344-546045:-1:exon

position:546045:-1
position: 546045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC108982541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108982541
product: somatic embryogenesis receptor kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 69 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_018953949.2
SIO_010081: LOC108982541
subclass of: SO_0000673
so part of: LOC108982541
location: complement(join(545344..546045,546538..546932,547176..547517,548184..548315,549675..549787,549873..549944,550089..550160,551446..551589,552209..552280,552785..552917,553740..554144))
location: region:545344-554144:-1
so has part: feature:553740-554144:-1:exon
so has part: feature:552785-552917:-1:exon
so has part: feature:552209-552280:-1:exon
so has part: feature:551446-551589:-1:exon
so has part: feature:550089-550160:-1:exon
so has part: feature:549873-549944:-1:exon
so has part: feature:549675-549787:-1:exon
so has part: feature:548184-548315:-1:exon
so has part: feature:547176-547517:-1:exon
so has part: feature:546538-546932:-1:exon
so has part: feature:545344-546045:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:553740-554144:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552785-552917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552209-552280:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551446-551589:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550089-550160:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:549873-549944:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549675-549787:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:548184-548315:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547176-547517:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546538-546932:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545344-546045:-1:exon

LOC108982541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108982541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: somatic embryogenesis receptor kinase 1
translation: MEVKDIWVSVLLWLILVVRPLCLISANMEGDALHSLRISLSDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGQLVPQLGLLRNLQYLELYSNNISGQIPSELGNLTSLVSLDLYLNSFTGPIPDTLGRLSKLRFLRLNNNSLTGPIPMSLTNISSLQVLDLSNNRLSGAVPDNGSFSLFTPISFANNQGLCGPVTGHPCPGSPPFSPPPPFVPPPPISVPGGNSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQKNYIEAEVEQLIQVALLCTQGSPMDRPKMSDVVRMLEGDGLAERWDEWQKVEVLREEVELAPHPNSDWIVDSTENLHAVELSGPR
SIO_010081: LOC108982541
subclass of: SO_0000673
so part of: LOC108982541
location: complement(join(545731..546045,546538..546932,547176..547517,548184..548315,549675..549787,549873..549944,550089..550160,551446..551589,552209..552280,552785..552917,553740..553827))
location: region:545731-553827:-1
so has part: feature:553740-553827:-1:exon
so has part: feature:552785-552917:-1:exon
so has part: feature:552209-552280:-1:exon
so has part: feature:551446-551589:-1:exon
so has part: feature:550089-550160:-1:exon
so has part: feature:549873-549944:-1:exon
so has part: feature:549675-549787:-1:exon
so has part: feature:548184-548315:-1:exon
so has part: feature:547176-547517:-1:exon
so has part: feature:546538-546932:-1:exon
so has part: feature:545731-546045:-1:exon

XP_018809494.1
type: Protein
SIO_000068: ncbiprotein

position:545731:-1
position: 545731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553740-553827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552785-552917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552209-552280:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551446-551589:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550089-550160:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:549873-549944:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549675-549787:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:548184-548315:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547176-547517:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546538-546932:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545731-546045:-1:exon

LOC108982541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108982541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: somatic embryogenesis receptor kinase 1
translation: MEVKDIWVSVLLWLILVVRPLCLISANMEGDALHSLRISLSDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGQLVPQLGLLRNLQYLELYSNNISGQIPSELGNLTSLVSLDLYLNSFTGPIPDTLGRLSKLRFLRLNNNSLTGPIPMSLTNISSLQVLDLSNNRLSGAVPDNGSFSLFTPISFANNQGLCGPVTGHPCPGSPPFSPPPPFVPPPPISVPGGNSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQKNYIEAEVEQLIQVALLCTQGSPMDRPKMSDVVRMLEGDGLAERWDEWQKVEVLREEVELAPHPNSDWIVDSTENLHAVELSGPR
SIO_010081: LOC108982541
subclass of: SO_0000673
so part of: LOC108982541
location: complement(join(545731..546045,546538..546932,547176..547517,548184..548315,549675..549787,549873..549944,550089..550160,551446..551589,552209..552280,552785..552917,553740..553827))
location: region:545731-553827:-1
so has part: feature:553740-553827:-1:exon
so has part: feature:552785-552917:-1:exon
so has part: feature:552209-552280:-1:exon
so has part: feature:551446-551589:-1:exon
so has part: feature:550089-550160:-1:exon
so has part: feature:549873-549944:-1:exon
so has part: feature:549675-549787:-1:exon
so has part: feature:548184-548315:-1:exon
so has part: feature:547176-547517:-1:exon
so has part: feature:546538-546932:-1:exon
so has part: feature:545731-546045:-1:exon

XP_018809495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:553740-553827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552785-552917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552209-552280:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551446-551589:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550089-550160:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:549873-549944:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549675-549787:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:548184-548315:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547176-547517:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546538-546932:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545731-546045:-1:exon

LOC108982536
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108982536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 565210..565833
location: region:565210-565833:1
so has part: feature:565210-565833:1:exon
subclass of: SO_0000010

108982536
type: Gene
SIO_000068: ncbigene

position:565210:1
position: 565210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565833:1
position: 565833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565210-565833:1:exon

LOC108982536
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108982536
product: class I heat shock protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035685909.1
SIO_010081: LOC108982536
subclass of: SO_0000673
so part of: LOC108982536
location: 565210..565833
location: region:565210-565833:1
so has part: feature:565210-565833:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565210-565833:1:exon

LOC108982536
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108982536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I heat shock protein-like
translation: MAGVGKDNVKVQVEDSNILQISGERVLEKEDKNDKWHRIERRRGSFVRRFRLPDNVNLNEITCKLENGVLTVQVPKKEPDQTAKNVRSIDVA
SIO_010081: LOC108982536
subclass of: SO_0000673
so part of: LOC108982536
location: 565288..565566
location: region:565288-565566:1
so has part: feature:565288-565566:1:exon

XP_035541802.1
type: Protein
SIO_000068: ncbiprotein

position:565288:1
position: 565288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565566:1
position: 565566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565288-565566:1:exon

LOC108982535
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108982535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(565778..569736)
location: region:565778-569736:-1
so has part: feature:565778-569736:-1:exon
subclass of: SO_0000010

108982535
type: Gene
SIO_000068: ncbigene

position:565778:-1
position: 565778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569736:-1
position: 569736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565778-569736:-1:exon

LOC108982535
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108982535
product: shikimate kinase 1, chloroplastic-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 14 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_018953937.2
SIO_010081: LOC108982535
subclass of: SO_0000673
so part of: LOC108982535
location: complement(join(565778..566058,566150..566214,566304..566382,566465..566594,566708..566790,567131..567218,567667..567739,567820..567874,568169..568227,568880..569126,569228..569736))
location: region:565778-569736:-1
so has part: feature:569228-569736:-1:exon
so has part: feature:568880-569126:-1:exon
so has part: feature:568169-568227:-1:exon
so has part: feature:567820-567874:-1:exon
so has part: feature:567667-567739:-1:exon
so has part: feature:567131-567218:-1:exon
so has part: feature:566708-566790:-1:exon
so has part: feature:566465-566594:-1:exon
so has part: feature:566304-566382:-1:exon
so has part: feature:566150-566214:-1:exon
so has part: feature:565778-566058:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:569228-569736:-1:exon

position:569228:-1
position: 569228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:568880-569126:-1:exon

position:568880:-1
position: 568880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569126:-1
position: 569126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:568169-568227:-1:exon

position:568169:-1
position: 568169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568227:-1
position: 568227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:567820-567874:-1:exon

position:567820:-1
position: 567820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567874:-1
position: 567874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:567667-567739:-1:exon

position:567667:-1
position: 567667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567739:-1
position: 567739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:567131-567218:-1:exon

position:567131:-1
position: 567131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567218:-1
position: 567218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:566708-566790:-1:exon

position:566708:-1
position: 566708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566790:-1
position: 566790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:566465-566594:-1:exon

position:566465:-1
position: 566465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566594:-1
position: 566594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:566304-566382:-1:exon

position:566304:-1
position: 566304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566382:-1
position: 566382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:566150-566214:-1:exon

position:566150:-1
position: 566150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566214:-1
position: 566214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:565778-566058:-1:exon

position:566058:-1
position: 566058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC108982535
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108982535
product: shikimate kinase 1, chloroplastic-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_018953938.2
SIO_010081: LOC108982535
subclass of: SO_0000673
so part of: LOC108982535
location: complement(join(565778..566058,566150..566214,566304..566382,566465..566594,566708..566790,567131..567218,567667..567739,567820..567874,568169..568227,568880..569130,569228..569428))
location: region:565778-569428:-1
so has part: feature:569228-569428:-1:exon
so has part: feature:568880-569130:-1:exon
so has part: feature:568169-568227:-1:exon
so has part: feature:567820-567874:-1:exon
so has part: feature:567667-567739:-1:exon
so has part: feature:567131-567218:-1:exon
so has part: feature:566708-566790:-1:exon
so has part: feature:566465-566594:-1:exon
so has part: feature:566304-566382:-1:exon
so has part: feature:566150-566214:-1:exon
so has part: feature:565778-566058:-1:exon

position:569428:-1
position: 569428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569228-569428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:568880-569130:-1:exon

position:569130:-1
position: 569130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:568169-568227:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567820-567874:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:567667-567739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:567131-567218:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:566708-566790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:566465-566594:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:566304-566382:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:566150-566214:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:565778-566058:-1:exon

LOC108982535
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108982535
product: shikimate kinase 1, chloroplastic-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_018953940.2
SIO_010081: LOC108982535
subclass of: SO_0000673
so part of: LOC108982535
location: complement(join(565960..566058,566150..566205,566465..566594,566708..566790,567131..567218,567667..567739,567820..567874,568169..568227,568880..569126,569228..569428))
location: region:565960-569428:-1
so has part: feature:569228-569428:-1:exon
so has part: feature:568880-569126:-1:exon
so has part: feature:568169-568227:-1:exon
so has part: feature:567820-567874:-1:exon
so has part: feature:567667-567739:-1:exon
so has part: feature:567131-567218:-1:exon
so has part: feature:566708-566790:-1:exon
so has part: feature:566465-566594:-1:exon
so has part: feature:566150-566205:-1:exon
so has part: feature:565960-566058:-1:exon

position:565960:-1
position: 565960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569228-569428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:568880-569126:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568169-568227:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567820-567874:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:567667-567739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:567131-567218:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:566708-566790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:566465-566594:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:566150-566205:-1:exon

position:566205:-1
position: 566205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:565960-566058:-1:exon

LOC108982535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108982535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: shikimate kinase 1, chloroplastic-like isoform X1
translation: MTFLLQRMIFEGMGATSGVAPRFSTLIIGSKMIGRKLNVAVVPLNQRDRKECITKKCDFRPKSACAMQRRLDFQLSLSCNHSQAITVVESGNVSSFDEDCLLKNKAEEVASFLNGRSIFLLGMMGSGKTTVGQVLSTALGYSFIDSDAYVEQAMGGTSVAQIFKHHGESFFRDHESEALWKLSSVPRQVVATGGGVVVRHINWKFMRQGISVFLDVPLDALARRIAIVGTDSRPLLHFDSGDAYTKTFVELFTLKKKRSMAYEDADATVSLLNLAANLHLDDMSDITPTAIAIEALVQIGEFLREENDSARRVHS
SIO_010081: LOC108982535
subclass of: SO_0000673
so part of: LOC108982535
location: complement(join(565993..566058,566150..566214,566304..566382,566465..566594,566708..566790,567131..567218,567667..567739,567820..567874,568169..568227,568880..569126,569228..569230))
location: region:565993-569230:-1
so has part: feature:569228-569230:-1:exon
so has part: feature:568880-569126:-1:exon
so has part: feature:568169-568227:-1:exon
so has part: feature:567820-567874:-1:exon
so has part: feature:567667-567739:-1:exon
so has part: feature:567131-567218:-1:exon
so has part: feature:566708-566790:-1:exon
so has part: feature:566465-566594:-1:exon
so has part: feature:566304-566382:-1:exon
so has part: feature:566150-566214:-1:exon
so has part: feature:565993-566058:-1:exon

XP_018809482.1
type: Protein
SIO_000068: ncbiprotein

position:565993:-1
position: 565993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569230:-1
position: 569230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569228-569230:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:568880-569126:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568169-568227:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567820-567874:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:567667-567739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:567131-567218:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:566708-566790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:566465-566594:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:566304-566382:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:566150-566214:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:565993-566058:-1:exon

LOC108982535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108982535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: shikimate kinase 1, chloroplastic-like isoform X2
translation: MIFEGMGATSGVAPRFSTLIIGSKMIGRKLNVAVVPLNQRDRKECITKKCDFRPKSACAMQRRLDFQLSLSCNHSQAITVVESGNVSSFDEDCLLKNKAEEVASFLNGRSIFLLGMMGSGKTTVGQVLSTALGYSFIDSDAYVEQAMGGTSVAQIFKHHGESFFRDHESEALWKLSSVPRQVVATGGGVVVRHINWKFMRQGISVFLDVPLDALARRIAIVGTDSRPLLHFDSGDAYTKTFVELFTLKKKRSMAYEDADATVSLLNLAANLHLDDMSDITPTAIAIEALVQIGEFLREENDSARRVHS
SIO_010081: LOC108982535
subclass of: SO_0000673
so part of: LOC108982535
location: complement(join(565993..566058,566150..566214,566304..566382,566465..566594,566708..566790,567131..567218,567667..567739,567820..567874,568169..568227,568880..569108))
location: region:565993-569108:-1
so has part: feature:568880-569108:-1:exon
so has part: feature:568169-568227:-1:exon
so has part: feature:567820-567874:-1:exon
so has part: feature:567667-567739:-1:exon
so has part: feature:567131-567218:-1:exon
so has part: feature:566708-566790:-1:exon
so has part: feature:566465-566594:-1:exon
so has part: feature:566304-566382:-1:exon
so has part: feature:566150-566214:-1:exon
so has part: feature:565993-566058:-1:exon

XP_018809483.1
type: Protein
SIO_000068: ncbiprotein

position:569108:-1
position: 569108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568880-569108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:568169-568227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567820-567874:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567667-567739:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:567131-567218:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:566708-566790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:566465-566594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:566304-566382:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:566150-566214:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:565993-566058:-1:exon

LOC108982535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108982535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: shikimate kinase 1, chloroplastic-like isoform X3
translation: MTFLLQRMIFEGMGATSGVAPRFSTLIIGSKMIGRKLNVAVVPLNQRDRKECITKKCDFRPKSACAMQRRLDFQLSLSCNHSQAITVVESGNVSSFDEDCLLKNKAEEVASFLNGRSIFLLGMMGSGKTTVGQVLSTALGYSFIDSDAYVEQAMGGTSVAQIFKHHGESFFRDHESEALWKLSSVPRQVVATGGGVVVRHINWKFMRQGISVFLDVPLDALARRIAIVGTDSRPLLHFDSGDAYTKLTCILMTCLISHQLP
SIO_010081: LOC108982535
subclass of: SO_0000673
so part of: LOC108982535
location: complement(join(566158..566205,566465..566594,566708..566790,567131..567218,567667..567739,567820..567874,568169..568227,568880..569126,569228..569230))
location: region:566158-569230:-1
so has part: feature:569228-569230:-1:exon
so has part: feature:568880-569126:-1:exon
so has part: feature:568169-568227:-1:exon
so has part: feature:567820-567874:-1:exon
so has part: feature:567667-567739:-1:exon
so has part: feature:567131-567218:-1:exon
so has part: feature:566708-566790:-1:exon
so has part: feature:566465-566594:-1:exon
so has part: feature:566158-566205:-1:exon

XP_018809485.1
type: Protein
SIO_000068: ncbiprotein

position:566158:-1
position: 566158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569228-569230:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:568880-569126:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568169-568227:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567820-567874:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:567667-567739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:567131-567218:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:566708-566790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:566465-566594:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:566158-566205:-1:exon

LOC108982534
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108982534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(570751..578335)
location: region:570751-578335:-1
so has part: feature:570751-578335:-1:exon
subclass of: SO_0000010

108982534
type: Gene
SIO_000068: ncbigene

position:570751:-1
position: 570751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578335:-1
position: 578335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570751-578335:-1:exon

LOC108982534
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51240
gene: LOC108982534
product: cleavage stimulating factor 64-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004798453.1
SIO_010081: LOC108982534
so part of: LOC108982534
location: complement(join(570751..570992,571404..571715,573196..573516,573887..574390,574481..574516,575540..575617,575710..575927,576039..576072,576156..576330,577571..577649,577934..578323))
location: region:570751-578323:-1
so has part: feature:577934-578323:-1:exon
so has part: feature:577571-577649:-1:exon
so has part: feature:576156-576330:-1:exon
so has part: feature:576039-576072:-1:exon
so has part: feature:575710-575927:-1:exon
so has part: feature:575540-575617:-1:exon
so has part: feature:574481-574516:-1:exon
so has part: feature:573887-574390:-1:exon
so has part: feature:573196-573516:-1:exon
so has part: feature:571404-571715:-1:exon
so has part: feature:570751-570992:-1:exon

position:578323:-1
position: 578323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577934-578323:-1:exon

position:577934:-1
position: 577934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:577571-577649:-1:exon

position:577571:-1
position: 577571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577649:-1
position: 577649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:576156-576330:-1:exon

position:576156:-1
position: 576156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576330:-1
position: 576330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:576039-576072:-1:exon

position:576039:-1
position: 576039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576072:-1
position: 576072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:575710-575927:-1:exon

position:575710:-1
position: 575710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575927:-1
position: 575927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:575540-575617:-1:exon

position:575540:-1
position: 575540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575617:-1
position: 575617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:574481-574516:-1:exon

position:574481:-1
position: 574481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574516:-1
position: 574516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:573887-574390:-1:exon

position:573887:-1
position: 573887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574390:-1
position: 574390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:573196-573516:-1:exon

position:573196:-1
position: 573196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573516:-1
position: 573516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:571404-571715:-1:exon

position:571404:-1
position: 571404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571715:-1
position: 571715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:570751-570992:-1:exon

position:570992:-1
position: 570992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC108982534
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108982534
product: cleavage stimulating factor 64-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 long SRA reads, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_018953935.2
SIO_010081: LOC108982534
subclass of: SO_0000673
so part of: LOC108982534
location: complement(join(571244..571715,573196..573516,573887..574390,574481..574516,575540..575617,575710..575927,576039..576072,576156..576330,577571..577649,577934..578335))
location: region:571244-578335:-1
so has part: feature:577934-578335:-1:exon
so has part: feature:577571-577649:-1:exon
so has part: feature:576156-576330:-1:exon
so has part: feature:576039-576072:-1:exon
so has part: feature:575710-575927:-1:exon
so has part: feature:575540-575617:-1:exon
so has part: feature:574481-574516:-1:exon
so has part: feature:573887-574390:-1:exon
so has part: feature:573196-573516:-1:exon
so has part: feature:571244-571715:-1:exon

position:571244:-1
position: 571244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577934-578335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577571-577649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:576156-576330:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576039-576072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575710-575927:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575540-575617:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:574481-574516:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:573887-574390:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:573196-573516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:571244-571715:-1:exon

LOC108982534
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108982534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulating factor 64-like
translation: MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGSDRNREQGRGGPGLAANVDPQKQLASSVAHGESVHHQPIGLHIAITAATVMAGALGGAQAGIQSALANDPLTLRLAKMSRSQLNGIISELKLMATQNKELARQLLIARPQLPKALFQAQIMLGMVTPQVLQMPNIRQTSGLATQPPLHDGQQGQPVAVQTLPRPPASAQNKMQSGLMTKVQDNQVAALPQNPVVLHQFSALPQHANNHGAQQATVPLQSAVSTLTAALPQSLGSLSSRSQVQAANSSSPNHQMQPSLLQHSGQVGAANAALFQMANPNTTIKPSLLPRPPLSDAGFQPGPSVSSVTSLAIKKDAEILAQVPDNGTQGLRSNAFSNAPSGSMFGDSLEPVNRPQKLMKMDDGRRTSFSAGSLNVTNTNGPGPSQVSGAGSLPVNPVPKAEGQISQSQLPPDVESVLLQQVLNLTPEQLSLLPPEQQQQVLQLQQVLRRDQIQLS
SIO_010081: LOC108982534
subclass of: SO_0000673
so part of: LOC108982534
location: complement(join(571566..571715,573196..573516,573887..574390,574481..574516,575540..575617,575710..575927,576039..576072,576156..576330,577571..577649,577934..577964))
location: region:571566-577964:-1
so has part: feature:577934-577964:-1:exon
so has part: feature:577571-577649:-1:exon
so has part: feature:576156-576330:-1:exon
so has part: feature:576039-576072:-1:exon
so has part: feature:575710-575927:-1:exon
so has part: feature:575540-575617:-1:exon
so has part: feature:574481-574516:-1:exon
so has part: feature:573887-574390:-1:exon
so has part: feature:573196-573516:-1:exon
so has part: feature:571566-571715:-1:exon

XP_018809480.2
type: Protein
SIO_000068: ncbiprotein

position:571566:-1
position: 571566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577964:-1
position: 577964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577934-577964:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577571-577649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:576156-576330:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576039-576072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575710-575927:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575540-575617:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:574481-574516:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:573887-574390:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:573196-573516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:571566-571715:-1:exon

LOC109018485
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109018485
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(579483..583998)
location: region:579483-583998:-1
so has part: feature:579483-583998:-1:exon
subclass of: SO_0000010

109018485
type: Gene
SIO_000068: ncbigene

position:579483:-1
position: 579483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583998:-1
position: 583998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579483-583998:-1:exon

LOC109018485
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109018485
product: NAC domain-containing protein 17-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 long SRA reads, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_019000647.2
SIO_010081: LOC109018485
subclass of: SO_0000673
so part of: LOC109018485
location: complement(join(579483..580046,580435..581002,581491..581793,581878..582155,583621..583998))
location: region:579483-583998:-1
so has part: feature:583621-583998:-1:exon
so has part: feature:581878-582155:-1:exon
so has part: feature:581491-581793:-1:exon
so has part: feature:580435-581002:-1:exon
so has part: feature:579483-580046:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:583621-583998:-1:exon

position:583621:-1
position: 583621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:581878-582155:-1:exon

position:581878:-1
position: 581878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582155:-1
position: 582155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:581491-581793:-1:exon

position:581491:-1
position: 581491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581793:-1
position: 581793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:580435-581002:-1:exon

position:580435:-1
position: 580435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581002:-1
position: 581002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:579483-580046:-1:exon

position:580046:-1
position: 580046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109018485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109018485
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAC domain-containing protein 17-like
translation: MMVKSKSCLEEDMWPPGFRFHPTDEELVLYYLKRKICGRRLKLDIIAEVDVYKWDPEELPGLSILKSGDRQWFFFSSRDRKYPNGGRSNRATSHGYWKATGKDRSITCNSRIVGVKKTLVFYRGRAPNGERTDWVMHEYIVDEEELKRCQNVQEYYALYKLYKKSGPGPKNGEQYGAPFKEEEWVDDECSDFNNSADRDISVKPLNEVTSVSVVRVNGQVQSTLDGFEEFMKRIADETELDQPQTNDYAHNQSQVGEEETQSTMVDPSSREGITNEPSRVLQPSGKLYDVPASFGHRQSATSQLQIHDTLEAISAPNRKENEPLVIHEEDFLEIDDLLNPQPGFDNNKVFENLQFQADGLYEFDRYHDAAMFLHDIGSINSHIVADPYINIIENNIVNQFDYQLQPNLDGAGPIDNQPWTHDQGRNIHTSAESNLGPFIPPPSGIECDPTNIPTKENENGCEDGDAASPFSSALWAFVESIPTTPAAASENALVNRALERMSSFGRVRLNLKKTNVSVGSGAETVRRRAGISKGILLISVIGLVCAILWALIGTNVKVLGTTISS
SIO_010081: LOC109018485
subclass of: SO_0000673
so part of: LOC109018485
location: complement(join(579679..580046,580435..581002,581491..581793,581878..582155,583621..583801))
location: region:579679-583801:-1
so has part: feature:583621-583801:-1:exon
so has part: feature:581878-582155:-1:exon
so has part: feature:581491-581793:-1:exon
so has part: feature:580435-581002:-1:exon
so has part: feature:579679-580046:-1:exon

XP_018856192.1
type: Protein
SIO_000068: ncbiprotein

position:579679:-1
position: 579679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583801:-1
position: 583801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583621-583801:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581878-582155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581491-581793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:580435-581002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:579679-580046:-1:exon

LOC109000394
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109000394
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 590372..594564
location: region:590372-594564:1
so has part: feature:590372-594564:1:exon
subclass of: SO_0000010

109000394
type: Gene
SIO_000068: ncbigene

position:590372:1
position: 590372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594564:1
position: 594564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590372-594564:1:exon

LOC109000394
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109000394
product: very-long-chain aldehyde decarbonylase GL1-9-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_018977251.2
SIO_010081: LOC109000394
subclass of: SO_0000673
so part of: LOC109000394
location: join(590372..590611,591069..591419,593642..594564)
location: region:590372-594564:1
so has part: feature:590372-590611:1:exon
so has part: feature:591069-591419:1:exon
so has part: feature:593642-594564:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:590372-590611:1:exon

position:590611:1
position: 590611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:591069-591419:1:exon

position:591069:1
position: 591069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591419:1
position: 591419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:593642-594564:1:exon

position:593642:1
position: 593642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109000394
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109000394
product: very-long-chain aldehyde decarbonylase GL1-9-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_018977252.2
SIO_010081: LOC109000394
subclass of: SO_0000673
so part of: LOC109000394
location: join(590997..591419,593642..594560)
location: region:590997-594560:1
so has part: feature:590997-591419:1:exon
so has part: feature:593642-594560:1:exon

position:590997:1
position: 590997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594560:1
position: 594560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590997-591419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:593642-594560:1:exon

LOC109000394
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109000394
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: very-long-chain aldehyde decarbonylase GL1-9-like
translation: MVFWEGYVSDEAMGTFSPIVVYWLYAGFYQLLPPLDNYRLHSKKEEALKNSVHLSSVVKGVLLQQLVQATVAQALFLLTSKADASGITIQPSIPVQIVQIVVAMFVMDTWQYFVHRFMHQNKFLYRHVHSQHHRLVVPYAIGALYNHPLEGLLLDTLGGALSFLVSGMTARTAVIFFCFAVVKTVDDHCGLWLPGNIFHIIFQNNSAYHDIHHQLPGLKYNYSQPFFPIWDKLLGTYMPYNLVKRPEGGLEARAMKD
SIO_010081: LOC109000394
subclass of: SO_0000673
so part of: LOC109000394
location: join(591189..591419,593642..594184)
location: region:591189-594184:1
so has part: feature:591189-591419:1:exon
so has part: feature:593642-594184:1:exon

XP_018832796.1
type: Protein
SIO_000068: ncbiprotein

position:591189:1
position: 591189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594184:1
position: 594184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591189-591419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:593642-594184:1:exon

LOC109000394
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109000394
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: very-long-chain aldehyde decarbonylase GL1-9-like
translation: MVFWEGYVSDEAMGTFSPIVVYWLYAGFYQLLPPLDNYRLHSKKEEALKNSVHLSSVVKGVLLQQLVQATVAQALFLLTSKADASGITIQPSIPVQIVQIVVAMFVMDTWQYFVHRFMHQNKFLYRHVHSQHHRLVVPYAIGALYNHPLEGLLLDTLGGALSFLVSGMTARTAVIFFCFAVVKTVDDHCGLWLPGNIFHIIFQNNSAYHDIHHQLPGLKYNYSQPFFPIWDKLLGTYMPYNLVKRPEGGLEARAMKD
SIO_010081: LOC109000394
subclass of: SO_0000673
so part of: LOC109000394
location: join(591189..591419,593642..594184)
location: region:591189-594184:1
so has part: feature:591189-591419:1:exon
so has part: feature:593642-594184:1:exon

XP_018832797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:591189-591419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:593642-594184:1:exon

LOC109000396
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109000396
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 596622..599463
location: region:596622-599463:1
so has part: feature:596622-599463:1:exon
subclass of: SO_0000010

109000396
type: Gene
SIO_000068: ncbigene

position:596622:1
position: 596622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599463:1
position: 599463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596622-599463:1:exon

LOC109000396
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109000396
product: co-chaperone protein p23-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_018977254.2
SIO_010081: LOC109000396
subclass of: SO_0000673
so part of: LOC109000396
location: join(596622..596746,598174..598360,598443..598605,598682..598719,598802..598859,598955..599463)
location: region:596622-599463:1
so has part: feature:596622-596746:1:exon
so has part: feature:598174-598360:1:exon
so has part: feature:598443-598605:1:exon
so has part: feature:598682-598719:1:exon
so has part: feature:598802-598859:1:exon
so has part: feature:598955-599463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:596622-596746:1:exon

position:596746:1
position: 596746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:598174-598360:1:exon

position:598174:1
position: 598174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598360:1
position: 598360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:598443-598605:1:exon

position:598443:1
position: 598443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598605:1
position: 598605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:598682-598719:1:exon

position:598682:1
position: 598682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598719:1
position: 598719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:598802-598859:1:exon

position:598802:1
position: 598802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598859:1
position: 598859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:598955-599463:1:exon

position:598955:1
position: 598955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109000396
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109000396
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: co-chaperone protein p23-1-like
translation: MSRHPSVKWAQRFDVLFITIDLPDAQDVKLKLEPEGKFFFSATIGAEKIPYEIDIDLYDKVDVNESKASIGLRNICYLVKKAEDKWWSRLLKQEGKPPVFLKVDWDKWVDEDEEQDKKPGNDMDFGDVDFSKLNMGGGESFDVDAAGEDDVSLEDSDTEEEENVEQAPSAGGKPDAQASLAAASGGGEPGEKA
SIO_010081: LOC109000396
subclass of: SO_0000673
so part of: LOC109000396
location: join(596742..596746,598174..598360,598443..598605,598682..598719,598802..598859,598955..599085)
location: region:596742-599085:1
so has part: feature:596742-596746:1:exon
so has part: feature:598174-598360:1:exon
so has part: feature:598443-598605:1:exon
so has part: feature:598682-598719:1:exon
so has part: feature:598802-598859:1:exon
so has part: feature:598955-599085:1:exon

XP_018832799.2
type: Protein
SIO_000068: ncbiprotein

position:596742:1
position: 596742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599085:1
position: 599085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596742-596746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:598174-598360:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:598443-598605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:598682-598719:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:598802-598859:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598955-599085:1:exon

LOC109000395
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109000395
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(599682..601941)
location: region:599682-601941:-1
so has part: feature:599682-601941:-1:exon
subclass of: SO_0000010

109000395
type: Gene
SIO_000068: ncbigene

position:599682:-1
position: 599682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601941:-1
position: 601941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599682-601941:-1:exon

LOC109000395
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109000395
product: pentatricopeptide repeat-containing protein At1g34160
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018977253.2
SIO_010081: LOC109000395
subclass of: SO_0000673
so part of: LOC109000395
location: complement(599682..601941)
location: region:599682-601941:-1
so has part: feature:599682-601941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:599682-601941:-1:exon

LOC109000395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109000395
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At1g34160
translation: MASLESLIQKCNSLSHVKQLQAHFITTSQLLFCSSRTKLLELCAVSPFGDLSYATHLFRHIQNPSTNDWNAVVRGLAAGPEPTRAISWYRTMSRQSCRVDALTCSFALKACARALARSEAMQIHSQVVRLGFYADVLLMTTLLDAYAKSGDLDGAKKVFDEMVVRDIASWNALIAGLAQGSRPSEAIELFNGMRVEGWKPDEITVLGALSACSQLGALKEGEKVHSYIMGEKLDMNVQVCNAVIDMYAKCGFANKAYTVFKNMCCRSLVTWNTMIMAFAMHGDGYKALELFEQMGQAGVHPDAVSYLGALCACNHAGLVNDGVRLFDSMAGSGLTPNVKHYGSVVDLLGRAGRLKEAYDIVSSMPMKSDEVLWQTLLGACKTYGNVEMAEIASRKLVEMGSKSCGDFVLLSNVYAAHERWKDVDRVRTAMKDRDVKKIPGFSYIEVDGVIHKFVNGDQNHFNWREIYAKLDEIKFRTKAYGYVAETNYVLHDIGQEEKENALCYHSEKLAVAFGLISTAEGTPIQVIKNLRICGDCHVVIKIISKIYNREIVVRDRARFHRFTEGLCSCKDYW
SIO_010081: LOC109000395
subclass of: SO_0000673
so part of: LOC109000395
location: complement(600165..601886)
location: region:600165-601886:-1
so has part: feature:600165-601886:-1:exon

XP_018832798.1
type: Protein
SIO_000068: ncbiprotein

position:600165:-1
position: 600165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601886:-1
position: 601886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600165-601886:-1:exon

LOC109000397
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109000397
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(602838..609139)
location: region:602838-609139:-1
so has part: feature:602838-609139:-1:exon
subclass of: SO_0000010

109000397
type: Gene
SIO_000068: ncbigene

position:602838:-1
position: 602838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609139:-1
position: 609139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602838-609139:-1:exon

LOC109000397
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109000397
product: probable F-actin-capping protein subunit beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_018977255.2
SIO_010081: LOC109000397
subclass of: SO_0000673
so part of: LOC109000397
location: complement(join(602838..603250,606725..606844,606996..607069,607142..607224,607354..607467,607907..607977,608962..609139))
location: region:602838-609139:-1
so has part: feature:608962-609139:-1:exon
so has part: feature:607907-607977:-1:exon
so has part: feature:607354-607467:-1:exon
so has part: feature:607142-607224:-1:exon
so has part: feature:606996-607069:-1:exon
so has part: feature:606725-606844:-1:exon
so has part: feature:602838-603250:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:608962-609139:-1:exon

position:608962:-1
position: 608962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:607907-607977:-1:exon

position:607907:-1
position: 607907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607977:-1
position: 607977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:607354-607467:-1:exon

position:607354:-1
position: 607354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607467:-1
position: 607467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:607142-607224:-1:exon

position:607142:-1
position: 607142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607224:-1
position: 607224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:606996-607069:-1:exon

position:606996:-1
position: 606996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607069:-1
position: 607069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:606725-606844:-1:exon

position:606725:-1
position: 606725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606844:-1
position: 606844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:602838-603250:-1:exon

position:603250:-1
position: 603250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109000397
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109000397
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable F-actin-capping protein subunit beta
translation: MEAAMGLMRRIPPKHTDAALSALLSLLPNHSSDLLSQVDQPLQVLFDVDCGKEFILCEYNRDADSYRSPWSNKYHPPLKDGALPSIVLRKLEVEANDIFAIYRDQYYEGGFSSVYMWEDDNEGFVACFLIKKDGSKTGQGRRGYLQEGAWDAIHVIEVGPEEEGVAHYCLTSTVMLSLTTDNELSGTFSLSGSIRRQMDMKLSVAEGHLCNMGRMIEEMESKLRNSLDQVYFGKTKEMVCTLRPPSEVVMRLPDC
SIO_010081: LOC109000397
subclass of: SO_0000673
so part of: LOC109000397
location: complement(join(603074..603250,606725..606844,606996..607069,607142..607224,607354..607467,607907..607977,608962..609090))
location: region:603074-609090:-1
so has part: feature:608962-609090:-1:exon
so has part: feature:607907-607977:-1:exon
so has part: feature:607354-607467:-1:exon
so has part: feature:607142-607224:-1:exon
so has part: feature:606996-607069:-1:exon
so has part: feature:606725-606844:-1:exon
so has part: feature:603074-603250:-1:exon

XP_018832800.2
type: Protein
SIO_000068: ncbiprotein

position:603074:-1
position: 603074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609090:-1
position: 609090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608962-609090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:607907-607977:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:607354-607467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:607142-607224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:606996-607069:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:606725-606844:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:603074-603250:-1:exon

LOC109000398
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109000398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 609779..613816
location: region:609779-613816:1
so has part: feature:609779-613816:1:exon
subclass of: SO_0000010

109000398
type: Gene
SIO_000068: ncbigene

position:609779:1
position: 609779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613816:1
position: 613816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609779-613816:1:exon

LOC109000398
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109000398
product: MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018977256.2
SIO_010081: LOC109000398
subclass of: SO_0000673
so part of: LOC109000398
location: join(609779..609902,610525..610792,611163..611257,611405..613242,613484..613816)
location: region:609779-613816:1
so has part: feature:609779-609902:1:exon
so has part: feature:610525-610792:1:exon
so has part: feature:611163-611257:1:exon
so has part: feature:611405-613242:1:exon
so has part: feature:613484-613816:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:609779-609902:1:exon

position:609902:1
position: 609902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:610525-610792:1:exon

position:610525:1
position: 610525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610792:1
position: 610792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:611163-611257:1:exon

position:611163:1
position: 611163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611257:1
position: 611257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:611405-613242:1:exon

position:611405:1
position: 611405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613242:1
position: 613242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:613484-613816:1:exon

position:613484:1
position: 613484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109000398
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109000398
product: MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_035685911.1
SIO_010081: LOC109000398
subclass of: SO_0000673
so part of: LOC109000398
location: join(609953..610013,610525..610792,611163..611257,611405..613242,613484..613816)
location: region:609953-613816:1
so has part: feature:609953-610013:1:exon
so has part: feature:610525-610792:1:exon
so has part: feature:611163-611257:1:exon
so has part: feature:611405-613242:1:exon
so has part: feature:613484-613816:1:exon

position:609953:1
position: 609953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609953-610013:1:exon

position:610013:1
position: 610013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:610525-610792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611163-611257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:611405-613242:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:613484-613816:1:exon

LOC109000398
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109000398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 2
translation: MDFGNGSASNERRKVHKSALDSADRLSVPLLKTSPKSPMSPKSPMSPKSPRSPRLHGKHSPFKHDRSSHSPKDGRPKKGGYGGKGTWGGLLDTDGTYFLDPNDPNYDSSEECEPLDAGKSTGDFEEYKKKAIIIVEEYFVTDDVASTSNELRELGNPRYSFYFVKKLVSMAMDRHDKEKEMAAALLSSLYADVVDPPQVYKGFSKLVKSADDLIVDIPDTVDVLALFIARAVVDDILPPAFLTKEMASLPKDSKGVEVLKRCEKGYLAAPLHADLIERRWGGSMNKTAENVKARIINLLMEYVNSSDMKEACRCINDLKVPFFHHEIVKRVLIMAMERQQAEGQLLDLLKEAVEEGLINSSQISKGFGRMIDTVDDLSLDIPNARGILQSLISKAASEGWLCASSLKSLKLEPGKQALDVGSAKIFKMKAQSTIQEYFLSGDISEVSSFLESEDKTCSAELNALFVKKLITLAMDRKSREKEMASVLLSSLYFPAEDVVNGFTMLIESADDTALDNPVVVEDLAMFLARAEVDEVLAPQHLEEIGTQCVGPDSIGSKVLQMARSLLKARLSGERILRCWGGGGSSRPGWAVEDVKDKIGKLLEEFESGGDIREACCCIKELGMPFFHHEIVKKALVTIMEKKNEKLWSLLEECFGSGLITMNQMTEGFGRVFESLDDLALDVPDAKKQFTNYVERAKIAGWLDSSSYFGKSEHATSTH
SIO_010081: LOC109000398
subclass of: SO_0000673
so part of: LOC109000398
location: join(610558..610792,611163..611257,611405..613231)
location: region:610558-613231:1
so has part: feature:610558-610792:1:exon
so has part: feature:611163-611257:1:exon
so has part: feature:611405-613231:1:exon

XP_018832801.1
type: Protein
SIO_000068: ncbiprotein

position:610558:1
position: 610558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613231:1
position: 613231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610558-610792:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611163-611257:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611405-613231:1:exon

LOC109000398
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109000398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 2
translation: MDFGNGSASNERRKVHKSALDSADRLSVPLLKTSPKSPMSPKSPMSPKSPRSPRLHGKHSPFKHDRSSHSPKDGRPKKGGYGGKGTWGGLLDTDGTYFLDPNDPNYDSSEECEPLDAGKSTGDFEEYKKKAIIIVEEYFVTDDVASTSNELRELGNPRYSFYFVKKLVSMAMDRHDKEKEMAAALLSSLYADVVDPPQVYKGFSKLVKSADDLIVDIPDTVDVLALFIARAVVDDILPPAFLTKEMASLPKDSKGVEVLKRCEKGYLAAPLHADLIERRWGGSMNKTAENVKARIINLLMEYVNSSDMKEACRCINDLKVPFFHHEIVKRVLIMAMERQQAEGQLLDLLKEAVEEGLINSSQISKGFGRMIDTVDDLSLDIPNARGILQSLISKAASEGWLCASSLKSLKLEPGKQALDVGSAKIFKMKAQSTIQEYFLSGDISEVSSFLESEDKTCSAELNALFVKKLITLAMDRKSREKEMASVLLSSLYFPAEDVVNGFTMLIESADDTALDNPVVVEDLAMFLARAEVDEVLAPQHLEEIGTQCVGPDSIGSKVLQMARSLLKARLSGERILRCWGGGGSSRPGWAVEDVKDKIGKLLEEFESGGDIREACCCIKELGMPFFHHEIVKKALVTIMEKKNEKLWSLLEECFGSGLITMNQMTEGFGRVFESLDDLALDVPDAKKQFTNYVERAKIAGWLDSSSYFGKSEHATSTH
SIO_010081: LOC109000398
subclass of: SO_0000673
so part of: LOC109000398
location: join(610558..610792,611163..611257,611405..613231)
location: region:610558-613231:1
so has part: feature:610558-610792:1:exon
so has part: feature:611163-611257:1:exon
so has part: feature:611405-613231:1:exon

XP_035541804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:610558-610792:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611163-611257:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611405-613231:1:exon

LOC109000390
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109000390
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 615851..618232
location: region:615851-618232:1
so has part: feature:615851-618232:1:exon
subclass of: SO_0000010

109000390
type: Gene
SIO_000068: ncbigene

position:615851:1
position: 615851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618232:1
position: 618232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615851-618232:1:exon

LOC109000390
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109000390
product: uncharacterized LOC109000390
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 long SRA reads, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_018977242.2
SIO_010081: LOC109000390
subclass of: SO_0000673
so part of: LOC109000390
location: join(615851..616304,617723..618232)
location: region:615851-618232:1
so has part: feature:615851-616304:1:exon
so has part: feature:617723-618232:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:615851-616304:1:exon

position:616304:1
position: 616304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:617723-618232:1:exon

position:617723:1
position: 617723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109000390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109000390
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109000390
translation: MEKTEKVAEAAEIVPEIEEAGSDPDGSPQPTDQSRSTKTVKTKVPEVEIRLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSIFAFKPGSGRGLAIRFNSRNGRSVLTYRDGSVIYVDGEPKDSLMKPVTKILVGVAVITILITLVLKETPVWVEKFNIFGGSFPPWILACVVIVFTRTRKRTKDFLKKTFGW
SIO_010081: LOC109000390
subclass of: SO_0000673
so part of: LOC109000390
location: join(615924..616304,617723..617938)
location: region:615924-617938:1
so has part: feature:615924-616304:1:exon
so has part: feature:617723-617938:1:exon

XP_018832787.1
type: Protein
SIO_000068: ncbiprotein

position:615924:1
position: 615924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617938:1
position: 617938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615924-616304:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:617723-617938:1:exon

LOC109000391
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109000391
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(619786..636458)
location: region:619786-636458:-1
so has part: feature:619786-636458:-1:exon
subclass of: SO_0000010

109000391
type: Gene
SIO_000068: ncbigene

position:619786:-1
position: 619786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636458:-1
position: 636458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619786-636458:-1:exon

LOC109000391
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109000391
product: cleavage stimulation factor subunit 77, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_035685913.1
SIO_010081: LOC109000391
subclass of: SO_0000673
so part of: LOC109000391
location: complement(join(619786..620148,621049..621267,622828..623001,623920..624021,624092..624194,624877..625029,626060..626119,626796..626892,627297..627361,627693..627833,628525..628593,628671..628729,628994..629114,629613..629676,630890..630936,631929..632057,632212..632352,632482..632543,633562..633662,635013..635122,635790..635852,635985..636065,636182..636458))
location: region:619786-636458:-1
so has part: feature:636182-636458:-1:exon
so has part: feature:635985-636065:-1:exon
so has part: feature:635790-635852:-1:exon
so has part: feature:635013-635122:-1:exon
so has part: feature:633562-633662:-1:exon
so has part: feature:632482-632543:-1:exon
so has part: feature:632212-632352:-1:exon
so has part: feature:631929-632057:-1:exon
so has part: feature:630890-630936:-1:exon
so has part: feature:629613-629676:-1:exon
so has part: feature:628994-629114:-1:exon
so has part: feature:628671-628729:-1:exon
so has part: feature:628525-628593:-1:exon
so has part: feature:627693-627833:-1:exon
so has part: feature:627297-627361:-1:exon
so has part: feature:626796-626892:-1:exon
so has part: feature:626060-626119:-1:exon
so has part: feature:624877-625029:-1:exon
so has part: feature:624092-624194:-1:exon
so has part: feature:623920-624021:-1:exon
so has part: feature:622828-623001:-1:exon
so has part: feature:621049-621267:-1:exon
so has part: feature:619786-620148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:636182-636458:-1:exon

position:636182:-1
position: 636182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:635985-636065:-1:exon

position:635985:-1
position: 635985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636065:-1
position: 636065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:635790-635852:-1:exon

position:635790:-1
position: 635790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635852:-1
position: 635852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:635013-635122:-1:exon

position:635013:-1
position: 635013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635122:-1
position: 635122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:633562-633662:-1:exon

position:633562:-1
position: 633562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633662:-1
position: 633662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:632482-632543:-1:exon

position:632482:-1
position: 632482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632543:-1
position: 632543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:632212-632352:-1:exon

position:632212:-1
position: 632212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632352:-1
position: 632352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:631929-632057:-1:exon

position:631929:-1
position: 631929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632057:-1
position: 632057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:630890-630936:-1:exon

position:630890:-1
position: 630890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630936:-1
position: 630936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:629613-629676:-1:exon

position:629613:-1
position: 629613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629676:-1
position: 629676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:628994-629114:-1:exon

position:628994:-1
position: 628994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629114:-1
position: 629114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:628671-628729:-1:exon

position:628671:-1
position: 628671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628729:-1
position: 628729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:628525-628593:-1:exon

position:628525:-1
position: 628525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628593:-1
position: 628593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:627693-627833:-1:exon

position:627693:-1
position: 627693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627833:-1
position: 627833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:627297-627361:-1:exon

position:627297:-1
position: 627297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627361:-1
position: 627361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:626796-626892:-1:exon

position:626796:-1
position: 626796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626892:-1
position: 626892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:626060-626119:-1:exon

position:626060:-1
position: 626060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626119:-1
position: 626119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:624877-625029:-1:exon

position:624877:-1
position: 624877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625029:-1
position: 625029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:624092-624194:-1:exon

position:624092:-1
position: 624092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624194:-1
position: 624194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:623920-624021:-1:exon

position:623920:-1
position: 623920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624021:-1
position: 624021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:622828-623001:-1:exon

position:622828:-1
position: 622828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623001:-1
position: 623001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:621049-621267:-1:exon

position:621049:-1
position: 621049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621267:-1
position: 621267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:619786-620148:-1:exon

position:620148:-1
position: 620148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109000391
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109000391
product: cleavage stimulation factor subunit 77, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_018977247.2
SIO_010081: LOC109000391
subclass of: SO_0000673
so part of: LOC109000391
location: complement(join(619786..620148,621049..621267,622828..623001,623920..624015,624092..624158,624877..625029,626060..626119,626796..626892,627297..627361,627693..627833,628525..628593,628671..628729,628994..629114,629613..629676,630890..630936,631929..632057,632212..632352,632482..632543,633562..633662,635013..635122,635790..635852,635985..636065,636179..636458))
location: region:619786-636458:-1
so has part: feature:636179-636458:-1:exon
so has part: feature:635985-636065:-1:exon
so has part: feature:635790-635852:-1:exon
so has part: feature:635013-635122:-1:exon
so has part: feature:633562-633662:-1:exon
so has part: feature:632482-632543:-1:exon
so has part: feature:632212-632352:-1:exon
so has part: feature:631929-632057:-1:exon
so has part: feature:630890-630936:-1:exon
so has part: feature:629613-629676:-1:exon
so has part: feature:628994-629114:-1:exon
so has part: feature:628671-628729:-1:exon
so has part: feature:628525-628593:-1:exon
so has part: feature:627693-627833:-1:exon
so has part: feature:627297-627361:-1:exon
so has part: feature:626796-626892:-1:exon
so has part: feature:626060-626119:-1:exon
so has part: feature:624877-625029:-1:exon
so has part: feature:624092-624158:-1:exon
so has part: feature:623920-624015:-1:exon
so has part: feature:622828-623001:-1:exon
so has part: feature:621049-621267:-1:exon
so has part: feature:619786-620148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:636179-636458:-1:exon

position:636179:-1
position: 636179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:635985-636065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635790-635852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635013-635122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633562-633662:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:632482-632543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:632212-632352:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:631929-632057:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:630890-630936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629613-629676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628994-629114:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:628671-628729:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:628525-628593:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:627693-627833:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:627297-627361:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:626796-626892:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:626060-626119:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:624877-625029:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:624092-624158:-1:exon

position:624158:-1
position: 624158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:623920-624015:-1:exon

position:624015:-1
position: 624015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:622828-623001:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:621049-621267:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:619786-620148:-1:exon

LOC109000391
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109000391
product: cleavage stimulation factor subunit 77, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_018977243.2
SIO_010081: LOC109000391
subclass of: SO_0000673
so part of: LOC109000391
location: complement(join(619786..620148,621049..621267,622828..623001,623920..624021,624092..624158,624877..625029,626060..626119,626796..626892,627297..627361,627693..627833,628525..628593,628671..628729,628994..629114,629613..629676,630890..630936,631929..632057,632212..632352,632482..632543,633562..633662,635013..635122,635790..635852,635985..636065,636179..636458))
location: region:619786-636458:-1
so has part: feature:636179-636458:-1:exon
so has part: feature:635985-636065:-1:exon
so has part: feature:635790-635852:-1:exon
so has part: feature:635013-635122:-1:exon
so has part: feature:633562-633662:-1:exon
so has part: feature:632482-632543:-1:exon
so has part: feature:632212-632352:-1:exon
so has part: feature:631929-632057:-1:exon
so has part: feature:630890-630936:-1:exon
so has part: feature:629613-629676:-1:exon
so has part: feature:628994-629114:-1:exon
so has part: feature:628671-628729:-1:exon
so has part: feature:628525-628593:-1:exon
so has part: feature:627693-627833:-1:exon
so has part: feature:627297-627361:-1:exon
so has part: feature:626796-626892:-1:exon
so has part: feature:626060-626119:-1:exon
so has part: feature:624877-625029:-1:exon
so has part: feature:624092-624158:-1:exon
so has part: feature:623920-624021:-1:exon
so has part: feature:622828-623001:-1:exon
so has part: feature:621049-621267:-1:exon
so has part: feature:619786-620148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:636179-636458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:635985-636065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635790-635852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635013-635122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633562-633662:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:632482-632543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:632212-632352:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:631929-632057:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:630890-630936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629613-629676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628994-629114:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:628671-628729:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:628525-628593:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:627693-627833:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:627297-627361:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:626796-626892:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:626060-626119:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:624877-625029:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:624092-624158:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:623920-624021:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:622828-623001:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:621049-621267:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:619786-620148:-1:exon

LOC109000391
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109000391
product: cleavage stimulation factor subunit 77, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_035685914.1
SIO_010081: LOC109000391
subclass of: SO_0000673
so part of: LOC109000391
location: complement(join(619786..620148,621049..621267,622828..623001,623920..624015,624092..624194,624877..625029,626060..626119,626796..626892,627297..627361,627693..627833,628525..628593,628671..628729,628994..629114,629613..629676,630890..630936,631929..632057,632212..632352,632482..632543,633562..633662,635013..635122,635790..635852,635985..636065,636179..636458))
location: region:619786-636458:-1
so has part: feature:636179-636458:-1:exon
so has part: feature:635985-636065:-1:exon
so has part: feature:635790-635852:-1:exon
so has part: feature:635013-635122:-1:exon
so has part: feature:633562-633662:-1:exon
so has part: feature:632482-632543:-1:exon
so has part: feature:632212-632352:-1:exon
so has part: feature:631929-632057:-1:exon
so has part: feature:630890-630936:-1:exon
so has part: feature:629613-629676:-1:exon
so has part: feature:628994-629114:-1:exon
so has part: feature:628671-628729:-1:exon
so has part: feature:628525-628593:-1:exon
so has part: feature:627693-627833:-1:exon
so has part: feature:627297-627361:-1:exon
so has part: feature:626796-626892:-1:exon
so has part: feature:626060-626119:-1:exon
so has part: feature:624877-625029:-1:exon
so has part: feature:624092-624194:-1:exon
so has part: feature:623920-624015:-1:exon
so has part: feature:622828-623001:-1:exon
so has part: feature:621049-621267:-1:exon
so has part: feature:619786-620148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:636179-636458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:635985-636065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635790-635852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635013-635122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633562-633662:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:632482-632543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:632212-632352:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:631929-632057:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:630890-630936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629613-629676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628994-629114:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:628671-628729:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:628525-628593:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:627693-627833:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:627297-627361:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:626796-626892:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:626060-626119:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:624877-625029:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:624092-624194:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:623920-624015:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:622828-623001:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:621049-621267:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:619786-620148:-1:exon

LOC109000391
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109000391
product: cleavage stimulation factor subunit 77, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_035685912.1
SIO_010081: LOC109000391
subclass of: SO_0000673
so part of: LOC109000391
location: complement(join(619786..620148,621049..621267,622828..623001,623920..624021,624092..624194,624877..625029,626060..626119,626796..626892,627297..627361,627693..627833,628525..628593,628671..628729,628994..629114,629613..629676,630890..630936,631929..632057,632212..632352,632482..632543,633562..633662,635013..635122,635790..635852,635985..636065,636179..636458))
location: region:619786-636458:-1
so has part: feature:636179-636458:-1:exon
so has part: feature:635985-636065:-1:exon
so has part: feature:635790-635852:-1:exon
so has part: feature:635013-635122:-1:exon
so has part: feature:633562-633662:-1:exon
so has part: feature:632482-632543:-1:exon
so has part: feature:632212-632352:-1:exon
so has part: feature:631929-632057:-1:exon
so has part: feature:630890-630936:-1:exon
so has part: feature:629613-629676:-1:exon
so has part: feature:628994-629114:-1:exon
so has part: feature:628671-628729:-1:exon
so has part: feature:628525-628593:-1:exon
so has part: feature:627693-627833:-1:exon
so has part: feature:627297-627361:-1:exon
so has part: feature:626796-626892:-1:exon
so has part: feature:626060-626119:-1:exon
so has part: feature:624877-625029:-1:exon
so has part: feature:624092-624194:-1:exon
so has part: feature:623920-624021:-1:exon
so has part: feature:622828-623001:-1:exon
so has part: feature:621049-621267:-1:exon
so has part: feature:619786-620148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:636179-636458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:635985-636065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635790-635852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635013-635122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633562-633662:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:632482-632543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:632212-632352:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:631929-632057:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:630890-630936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629613-629676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628994-629114:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:628671-628729:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:628525-628593:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:627693-627833:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:627297-627361:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:626796-626892:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:626060-626119:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:624877-625029:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:624092-624194:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:623920-624021:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:622828-623001:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:621049-621267:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:619786-620148:-1:exon

LOC109000391
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109000391
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 77 isoform X2
translation: MSSTDKTMGDSKAMDDKYNVEAAEVLANEAQHLPITEAAPIYEQLLTLFPTAAKYWKQYVEAHMAVNNDDATKQIFSRCLLNCLQIPLWRCYIRFIKMANESKGLEGQEETRKAFDFMLNYVGADIASGPIWMEYITFLKSLPALSTQEESQRMTAVRKVYQKAIVTPTHHIEQLWRDYENFENSVSRQLAKGLLSEYQPKFNSARAVYRERKKYVDEIDWNMLAVPPSGSYKEEVQWMGWKRLLAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDIWYDYATWHAKSGSVDTAVKVFQRALKALPDSEMLRYAYAELEESRGAIQPAKKIYESLLGDDVNTTTLAHIQFIRFLRRTEGVEAARKYFLDARKSPNCTYHVYVAYAMMAFCLDKDREIAHNVFEAGLKRFMHEPLYILEYADFLTRLNDDRNIRALFERALSSLPPEESVEVWKRFAQFEQTYGDLASMLKVEQRRKEALSRTGEEGASALVGSLQDVVSRYSFMDLWPCSSKDLDHLARQEIIPRPVFSPSFQWLAKNMNKKVEKLALPNGPGSVDKDYTGLISNSTVSAKVVNPDVSKMVIYDPRQKSGIETLPSTTSSGVPAAYSNLSNPVAAIVGGGMTNAFDEILKATPPALVAFLASLPVVEGPTPDVDVVLSICLQSDIPAGQTGKLGTSSVQLSGGPAPTTSVLSGSKSHPIPSAASFKTTRDRQAGKRKDLDRQEDDETATVQSQPLPRDVFRMRQIQKSRGGTTTKARGVTTSQTGSASYGSALSGDLSGSTG
SIO_010081: LOC109000391
subclass of: SO_0000673
so part of: LOC109000391
location: complement(join(619961..620148,621049..621267,622828..623001,623920..624021,624092..624194,624877..625029,626060..626119,626796..626892,627297..627361,627693..627833,628525..628593,628671..628729,628994..629114,629613..629676,630890..630936,631929..632057,632212..632352,632482..632543,633562..633662,635013..635122,635790..635852,635985..636065,636182..636193))
location: region:619961-636193:-1
so has part: feature:636182-636193:-1:exon
so has part: feature:635985-636065:-1:exon
so has part: feature:635790-635852:-1:exon
so has part: feature:635013-635122:-1:exon
so has part: feature:633562-633662:-1:exon
so has part: feature:632482-632543:-1:exon
so has part: feature:632212-632352:-1:exon
so has part: feature:631929-632057:-1:exon
so has part: feature:630890-630936:-1:exon
so has part: feature:629613-629676:-1:exon
so has part: feature:628994-629114:-1:exon
so has part: feature:628671-628729:-1:exon
so has part: feature:628525-628593:-1:exon
so has part: feature:627693-627833:-1:exon
so has part: feature:627297-627361:-1:exon
so has part: feature:626796-626892:-1:exon
so has part: feature:626060-626119:-1:exon
so has part: feature:624877-625029:-1:exon
so has part: feature:624092-624194:-1:exon
so has part: feature:623920-624021:-1:exon
so has part: feature:622828-623001:-1:exon
so has part: feature:621049-621267:-1:exon
so has part: feature:619961-620148:-1:exon

XP_035541806.1
type: Protein
SIO_000068: ncbiprotein

position:619961:-1
position: 619961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636193:-1
position: 636193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636182-636193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:635985-636065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635790-635852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635013-635122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633562-633662:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:632482-632543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:632212-632352:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:631929-632057:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:630890-630936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629613-629676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628994-629114:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:628671-628729:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:628525-628593:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:627693-627833:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:627297-627361:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:626796-626892:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:626060-626119:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:624877-625029:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:624092-624194:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:623920-624021:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:622828-623001:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:621049-621267:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:619961-620148:-1:exon

LOC109000391
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109000391
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 77 isoform X5
translation: MSSTVDKTMGDSKAMDDKYNVEAAEVLANEAQHLPITEAAPIYEQLLTLFPTAAKYWKQYVEAHMAVNNDDATKQIFSRCLLNCLQIPLWRCYIRFIKMANESKGLEGQEETRKAFDFMLNYVGADIASGPIWMEYITFLKSLPALSTQEESQRMTAVRKVYQKAIVTPTHHIEQLWRDYENFENSVSRQLAKGLLSEYQPKFNSARAVYRERKKYVDEIDWNMLAVPPSGSYKEEVQWMGWKRLLAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDIWYDYATWHAKSGSVDTAVKVFQRALKALPDSEMLRYAYAELEESRGAIQPAKKIYESLLGDDVNTTTLAHIQFIRFLRRTEGVEAARKYFLDARKSPNCTYHVYVAYAMMAFCLDKDREIAHNVFEAGLKRFMHEPLYILEYADFLTRLNDDRNIRALFERALSSLPPEESVEVWKRFAQFEQTYGDLASMLKVEQRRKEALSRTGEEGASALVGSLQDVVSRYSFMDLWPCSSKDLDHLARQEWLAKNMNKKVEKLALPNGPGSVDYTGLISNSTVSAKVVNPDVSKMVIYDPRQKSGIETLPSTTSSGVPAAYSNLSNPVAAIVGGGMTNAFDEILKATPPALVAFLASLPVVEGPTPDVDVVLSICLQSDIPAGQTGKLGTSSVQLSGGPAPTTSVLSGSKSHPIPSAASFKTTRDRQAGKRKDLDRQEDDETATVQSQPLPRDVFRMRQIQKSRGGTTTKARGVTTSQTGSASYGSALSGDLSGSTG
SIO_010081: LOC109000391
subclass of: SO_0000673
so part of: LOC109000391
location: complement(join(619961..620148,621049..621267,622828..623001,623920..624015,624092..624158,624877..625029,626060..626119,626796..626892,627297..627361,627693..627833,628525..628593,628671..628729,628994..629114,629613..629676,630890..630936,631929..632057,632212..632352,632482..632543,633562..633662,635013..635122,635790..635852,635985..636065,636179..636193))
location: region:619961-636193:-1
so has part: feature:636179-636193:-1:exon
so has part: feature:635985-636065:-1:exon
so has part: feature:635790-635852:-1:exon
so has part: feature:635013-635122:-1:exon
so has part: feature:633562-633662:-1:exon
so has part: feature:632482-632543:-1:exon
so has part: feature:632212-632352:-1:exon
so has part: feature:631929-632057:-1:exon
so has part: feature:630890-630936:-1:exon
so has part: feature:629613-629676:-1:exon
so has part: feature:628994-629114:-1:exon
so has part: feature:628671-628729:-1:exon
so has part: feature:628525-628593:-1:exon
so has part: feature:627693-627833:-1:exon
so has part: feature:627297-627361:-1:exon
so has part: feature:626796-626892:-1:exon
so has part: feature:626060-626119:-1:exon
so has part: feature:624877-625029:-1:exon
so has part: feature:624092-624158:-1:exon
so has part: feature:623920-624015:-1:exon
so has part: feature:622828-623001:-1:exon
so has part: feature:621049-621267:-1:exon
so has part: feature:619961-620148:-1:exon

XP_018832792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:636179-636193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:635985-636065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635790-635852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635013-635122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633562-633662:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:632482-632543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:632212-632352:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:631929-632057:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:630890-630936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629613-629676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628994-629114:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:628671-628729:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:628525-628593:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:627693-627833:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:627297-627361:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:626796-626892:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:626060-626119:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:624877-625029:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:624092-624158:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:623920-624015:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:622828-623001:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:621049-621267:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:619961-620148:-1:exon

LOC109000391
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109000391
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 77 isoform X4
translation: MSSTVDKTMGDSKAMDDKYNVEAAEVLANEAQHLPITEAAPIYEQLLTLFPTAAKYWKQYVEAHMAVNNDDATKQIFSRCLLNCLQIPLWRCYIRFIKMANESKGLEGQEETRKAFDFMLNYVGADIASGPIWMEYITFLKSLPALSTQEESQRMTAVRKVYQKAIVTPTHHIEQLWRDYENFENSVSRQLAKGLLSEYQPKFNSARAVYRERKKYVDEIDWNMLAVPPSGSYKEEVQWMGWKRLLAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDIWYDYATWHAKSGSVDTAVKVFQRALKALPDSEMLRYAYAELEESRGAIQPAKKIYESLLGDDVNTTTLAHIQFIRFLRRTEGVEAARKYFLDARKSPNCTYHVYVAYAMMAFCLDKDREIAHNVFEAGLKRFMHEPLYILEYADFLTRLNDDRNIRALFERALSSLPPEESVEVWKRFAQFEQTYGDLASMLKVEQRRKEALSRTGEEGASALVGSLQDVVSRYSFMDLWPCSSKDLDHLARQEWLAKNMNKKVEKLALPNGPGSVDKDYTGLISNSTVSAKVVNPDVSKMVIYDPRQKSGIETLPSTTSSGVPAAYSNLSNPVAAIVGGGMTNAFDEILKATPPALVAFLASLPVVEGPTPDVDVVLSICLQSDIPAGQTGKLGTSSVQLSGGPAPTTSVLSGSKSHPIPSAASFKTTRDRQAGKRKDLDRQEDDETATVQSQPLPRDVFRMRQIQKSRGGTTTKARGVTTSQTGSASYGSALSGDLSGSTG
SIO_010081: LOC109000391
subclass of: SO_0000673
so part of: LOC109000391
location: complement(join(619961..620148,621049..621267,622828..623001,623920..624021,624092..624158,624877..625029,626060..626119,626796..626892,627297..627361,627693..627833,628525..628593,628671..628729,628994..629114,629613..629676,630890..630936,631929..632057,632212..632352,632482..632543,633562..633662,635013..635122,635790..635852,635985..636065,636179..636193))
location: region:619961-636193:-1
so has part: feature:636179-636193:-1:exon
so has part: feature:635985-636065:-1:exon
so has part: feature:635790-635852:-1:exon
so has part: feature:635013-635122:-1:exon
so has part: feature:633562-633662:-1:exon
so has part: feature:632482-632543:-1:exon
so has part: feature:632212-632352:-1:exon
so has part: feature:631929-632057:-1:exon
so has part: feature:630890-630936:-1:exon
so has part: feature:629613-629676:-1:exon
so has part: feature:628994-629114:-1:exon
so has part: feature:628671-628729:-1:exon
so has part: feature:628525-628593:-1:exon
so has part: feature:627693-627833:-1:exon
so has part: feature:627297-627361:-1:exon
so has part: feature:626796-626892:-1:exon
so has part: feature:626060-626119:-1:exon
so has part: feature:624877-625029:-1:exon
so has part: feature:624092-624158:-1:exon
so has part: feature:623920-624021:-1:exon
so has part: feature:622828-623001:-1:exon
so has part: feature:621049-621267:-1:exon
so has part: feature:619961-620148:-1:exon

XP_018832788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:636179-636193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:635985-636065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635790-635852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635013-635122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633562-633662:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:632482-632543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:632212-632352:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:631929-632057:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:630890-630936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629613-629676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628994-629114:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:628671-628729:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:628525-628593:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:627693-627833:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:627297-627361:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:626796-626892:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:626060-626119:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:624877-625029:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:624092-624158:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:623920-624021:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:622828-623001:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:621049-621267:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:619961-620148:-1:exon

LOC109000391
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109000391
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 77 isoform X3
translation: MSSTVDKTMGDSKAMDDKYNVEAAEVLANEAQHLPITEAAPIYEQLLTLFPTAAKYWKQYVEAHMAVNNDDATKQIFSRCLLNCLQIPLWRCYIRFIKMANESKGLEGQEETRKAFDFMLNYVGADIASGPIWMEYITFLKSLPALSTQEESQRMTAVRKVYQKAIVTPTHHIEQLWRDYENFENSVSRQLAKGLLSEYQPKFNSARAVYRERKKYVDEIDWNMLAVPPSGSYKEEVQWMGWKRLLAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDIWYDYATWHAKSGSVDTAVKVFQRALKALPDSEMLRYAYAELEESRGAIQPAKKIYESLLGDDVNTTTLAHIQFIRFLRRTEGVEAARKYFLDARKSPNCTYHVYVAYAMMAFCLDKDREIAHNVFEAGLKRFMHEPLYILEYADFLTRLNDDRNIRALFERALSSLPPEESVEVWKRFAQFEQTYGDLASMLKVEQRRKEALSRTGEEGASALVGSLQDVVSRYSFMDLWPCSSKDLDHLARQEIIPRPVFSPSFQWLAKNMNKKVEKLALPNGPGSVDYTGLISNSTVSAKVVNPDVSKMVIYDPRQKSGIETLPSTTSSGVPAAYSNLSNPVAAIVGGGMTNAFDEILKATPPALVAFLASLPVVEGPTPDVDVVLSICLQSDIPAGQTGKLGTSSVQLSGGPAPTTSVLSGSKSHPIPSAASFKTTRDRQAGKRKDLDRQEDDETATVQSQPLPRDVFRMRQIQKSRGGTTTKARGVTTSQTGSASYGSALSGDLSGSTG
SIO_010081: LOC109000391
subclass of: SO_0000673
so part of: LOC109000391
location: complement(join(619961..620148,621049..621267,622828..623001,623920..624015,624092..624194,624877..625029,626060..626119,626796..626892,627297..627361,627693..627833,628525..628593,628671..628729,628994..629114,629613..629676,630890..630936,631929..632057,632212..632352,632482..632543,633562..633662,635013..635122,635790..635852,635985..636065,636179..636193))
location: region:619961-636193:-1
so has part: feature:636179-636193:-1:exon
so has part: feature:635985-636065:-1:exon
so has part: feature:635790-635852:-1:exon
so has part: feature:635013-635122:-1:exon
so has part: feature:633562-633662:-1:exon
so has part: feature:632482-632543:-1:exon
so has part: feature:632212-632352:-1:exon
so has part: feature:631929-632057:-1:exon
so has part: feature:630890-630936:-1:exon
so has part: feature:629613-629676:-1:exon
so has part: feature:628994-629114:-1:exon
so has part: feature:628671-628729:-1:exon
so has part: feature:628525-628593:-1:exon
so has part: feature:627693-627833:-1:exon
so has part: feature:627297-627361:-1:exon
so has part: feature:626796-626892:-1:exon
so has part: feature:626060-626119:-1:exon
so has part: feature:624877-625029:-1:exon
so has part: feature:624092-624194:-1:exon
so has part: feature:623920-624015:-1:exon
so has part: feature:622828-623001:-1:exon
so has part: feature:621049-621267:-1:exon
so has part: feature:619961-620148:-1:exon

XP_035541807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:636179-636193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:635985-636065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635790-635852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635013-635122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633562-633662:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:632482-632543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:632212-632352:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:631929-632057:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:630890-630936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629613-629676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628994-629114:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:628671-628729:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:628525-628593:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:627693-627833:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:627297-627361:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:626796-626892:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:626060-626119:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:624877-625029:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:624092-624194:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:623920-624015:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:622828-623001:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:621049-621267:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:619961-620148:-1:exon

LOC109000391
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109000391
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 77 isoform X1
translation: MSSTVDKTMGDSKAMDDKYNVEAAEVLANEAQHLPITEAAPIYEQLLTLFPTAAKYWKQYVEAHMAVNNDDATKQIFSRCLLNCLQIPLWRCYIRFIKMANESKGLEGQEETRKAFDFMLNYVGADIASGPIWMEYITFLKSLPALSTQEESQRMTAVRKVYQKAIVTPTHHIEQLWRDYENFENSVSRQLAKGLLSEYQPKFNSARAVYRERKKYVDEIDWNMLAVPPSGSYKEEVQWMGWKRLLAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDIWYDYATWHAKSGSVDTAVKVFQRALKALPDSEMLRYAYAELEESRGAIQPAKKIYESLLGDDVNTTTLAHIQFIRFLRRTEGVEAARKYFLDARKSPNCTYHVYVAYAMMAFCLDKDREIAHNVFEAGLKRFMHEPLYILEYADFLTRLNDDRNIRALFERALSSLPPEESVEVWKRFAQFEQTYGDLASMLKVEQRRKEALSRTGEEGASALVGSLQDVVSRYSFMDLWPCSSKDLDHLARQEIIPRPVFSPSFQWLAKNMNKKVEKLALPNGPGSVDKDYTGLISNSTVSAKVVNPDVSKMVIYDPRQKSGIETLPSTTSSGVPAAYSNLSNPVAAIVGGGMTNAFDEILKATPPALVAFLASLPVVEGPTPDVDVVLSICLQSDIPAGQTGKLGTSSVQLSGGPAPTTSVLSGSKSHPIPSAASFKTTRDRQAGKRKDLDRQEDDETATVQSQPLPRDVFRMRQIQKSRGGTTTKARGVTTSQTGSASYGSALSGDLSGSTG
SIO_010081: LOC109000391
subclass of: SO_0000673
so part of: LOC109000391
location: complement(join(619961..620148,621049..621267,622828..623001,623920..624021,624092..624194,624877..625029,626060..626119,626796..626892,627297..627361,627693..627833,628525..628593,628671..628729,628994..629114,629613..629676,630890..630936,631929..632057,632212..632352,632482..632543,633562..633662,635013..635122,635790..635852,635985..636065,636179..636193))
location: region:619961-636193:-1
so has part: feature:636179-636193:-1:exon
so has part: feature:635985-636065:-1:exon
so has part: feature:635790-635852:-1:exon
so has part: feature:635013-635122:-1:exon
so has part: feature:633562-633662:-1:exon
so has part: feature:632482-632543:-1:exon
so has part: feature:632212-632352:-1:exon
so has part: feature:631929-632057:-1:exon
so has part: feature:630890-630936:-1:exon
so has part: feature:629613-629676:-1:exon
so has part: feature:628994-629114:-1:exon
so has part: feature:628671-628729:-1:exon
so has part: feature:628525-628593:-1:exon
so has part: feature:627693-627833:-1:exon
so has part: feature:627297-627361:-1:exon
so has part: feature:626796-626892:-1:exon
so has part: feature:626060-626119:-1:exon
so has part: feature:624877-625029:-1:exon
so has part: feature:624092-624194:-1:exon
so has part: feature:623920-624021:-1:exon
so has part: feature:622828-623001:-1:exon
so has part: feature:621049-621267:-1:exon
so has part: feature:619961-620148:-1:exon

XP_035541805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:636179-636193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:635985-636065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635790-635852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635013-635122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633562-633662:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:632482-632543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:632212-632352:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:631929-632057:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:630890-630936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629613-629676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628994-629114:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:628671-628729:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:628525-628593:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:627693-627833:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:627297-627361:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:626796-626892:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:626060-626119:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:624877-625029:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:624092-624194:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:623920-624021:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:622828-623001:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:621049-621267:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:619961-620148:-1:exon

LOC108981172
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108981172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 640665..651714
location: region:640665-651714:1
so has part: feature:640665-651714:1:exon
subclass of: SO_0000010

108981172
type: Gene
SIO_000068: ncbigene

position:640665:1
position: 640665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651714:1
position: 651714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:640665-651714:1:exon

LOC108981172
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108981172
product: ras-related protein Rab7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 long SRA reads, 33 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_018952262.2
SIO_010081: LOC108981172
subclass of: SO_0000673
so part of: LOC108981172
location: join(640665..641054,641147..641173,641513..641612,641712..641858,650709..650789,650858..651003,651344..651714)
location: region:640665-651714:1
so has part: feature:640665-641054:1:exon
so has part: feature:641147-641173:1:exon
so has part: feature:641513-641612:1:exon
so has part: feature:641712-641858:1:exon
so has part: feature:650709-650789:1:exon
so has part: feature:650858-651003:1:exon
so has part: feature:651344-651714:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:640665-641054:1:exon

position:641054:1
position: 641054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:641147-641173:1:exon

position:641147:1
position: 641147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641173:1
position: 641173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:641513-641612:1:exon

position:641513:1
position: 641513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641612:1
position: 641612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:641712-641858:1:exon

position:641712:1
position: 641712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641858:1
position: 641858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:650709-650789:1:exon

position:650709:1
position: 650709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650789:1
position: 650789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:650858-651003:1:exon

position:650858:1
position: 650858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651003:1
position: 651003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:651344-651714:1:exon

position:651344:1
position: 651344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108981172
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108981172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab7
translation: MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFTQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGSDCCVLVYDVNVMKSFDTLDNWHEEFLKQANPANPRTFPFILLGNKIDVDGGNSRVVSEKKAKEWCASKGNIPYFETSAKEDYNVDPAFFSIGKTALANERDQDIYFQGIPEVASEAEQDGGCAC
SIO_010081: LOC108981172
subclass of: SO_0000673
so part of: LOC108981172
location: join(641002..641054,641147..641173,641513..641612,641712..641858,650709..650789,650858..651003,651344..651407)
location: region:641002-651407:1
so has part: feature:641002-641054:1:exon
so has part: feature:641147-641173:1:exon
so has part: feature:641513-641612:1:exon
so has part: feature:641712-641858:1:exon
so has part: feature:650709-650789:1:exon
so has part: feature:650858-651003:1:exon
so has part: feature:651344-651407:1:exon

XP_018807807.2
type: Protein
SIO_000068: ncbiprotein

position:641002:1
position: 641002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651407:1
position: 651407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641002-641054:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641147-641173:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641513-641612:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641712-641858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650709-650789:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:650858-651003:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651344-651407:1:exon

LOC108981171
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108981171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 655925..663775
location: region:655925-663775:1
so has part: feature:655925-663775:1:exon
subclass of: SO_0000010

108981171
type: Gene
SIO_000068: ncbigene

position:655925:1
position: 655925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663775:1
position: 663775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655925-663775:1:exon

LOC108981171
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108981171
product: uncharacterized LOC108981171, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_035685916.1
SIO_010081: LOC108981171
subclass of: SO_0000673
so part of: LOC108981171
location: join(655925..656133,656622..656673,657462..657535,658044..658145,659570..659713,660512..660563,661700..661773,663118..663207,663422..663748)
location: region:655925-663748:1
so has part: feature:655925-656133:1:exon
so has part: feature:656622-656673:1:exon
so has part: feature:657462-657535:1:exon
so has part: feature:658044-658145:1:exon
so has part: feature:659570-659713:1:exon
so has part: feature:660512-660563:1:exon
so has part: feature:661700-661773:1:exon
so has part: feature:663118-663207:1:exon
so has part: feature:663422-663748:1:exon

position:663748:1
position: 663748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655925-656133:1:exon

position:656133:1
position: 656133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:656622-656673:1:exon

position:656622:1
position: 656622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656673:1
position: 656673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:657462-657535:1:exon

position:657462:1
position: 657462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657535:1
position: 657535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:658044-658145:1:exon

position:658044:1
position: 658044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658145:1
position: 658145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:659570-659713:1:exon

position:659570:1
position: 659570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659713:1
position: 659713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:660512-660563:1:exon

position:660512:1
position: 660512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660563:1
position: 660563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:661700-661773:1:exon

position:661700:1
position: 661700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661773:1
position: 661773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:663118-663207:1:exon

position:663118:1
position: 663118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663207:1
position: 663207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:663422-663748:1:exon

position:663422:1
position: 663422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108981171
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108981171
product: uncharacterized LOC108981171, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_035685915.1
SIO_010081: LOC108981171
subclass of: SO_0000673
so part of: LOC108981171
location: join(655926..656133,656622..656673,657462..657535,658044..658145,659570..659713,660512..660563,661700..661773,663118..663207,663417..663775)
location: region:655926-663775:1
so has part: feature:655926-656133:1:exon
so has part: feature:656622-656673:1:exon
so has part: feature:657462-657535:1:exon
so has part: feature:658044-658145:1:exon
so has part: feature:659570-659713:1:exon
so has part: feature:660512-660563:1:exon
so has part: feature:661700-661773:1:exon
so has part: feature:663118-663207:1:exon
so has part: feature:663417-663775:1:exon

position:655926:1
position: 655926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655926-656133:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:656622-656673:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:657462-657535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:658044-658145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659570-659713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:660512-660563:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:661700-661773:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:663118-663207:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:663417-663775:1:exon

position:663417:1
position: 663417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108981171
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108981171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC108981171 isoform X1
translation: MANSLVTGLRTLFAVLGCAMVATLIFTIFVDGLPFRKELLTPWMAATLVDFYINVVPLAVWVLYKESTWLSAILWIILLACFGSITTCAYILMQFLKLSSQESLQDPMYYVLLRHTDKVNMEQKMKHSSVVTLRIVFVALGCLMTGTLLYTLLTDGSPFRKELFTPWMLATLIDFYINVVALSVWVYYKESNWISSIFWIILLISFGSITTCVYIAWKLFQLSPQDPAYLVLLSSGSRAENRYNGLHAETVQH
SIO_010081: LOC108981171
subclass of: SO_0000673
so part of: LOC108981171
location: join(656009..656133,656622..656673,657462..657535,658044..658145,659570..659713,660512..660563,661700..661773,663118..663207,663417..663465)
location: region:656009-663465:1
so has part: feature:656009-656133:1:exon
so has part: feature:656622-656673:1:exon
so has part: feature:657462-657535:1:exon
so has part: feature:658044-658145:1:exon
so has part: feature:659570-659713:1:exon
so has part: feature:660512-660563:1:exon
so has part: feature:661700-661773:1:exon
so has part: feature:663118-663207:1:exon
so has part: feature:663417-663465:1:exon

XP_035541808.1
type: Protein
SIO_000068: ncbiprotein

position:656009:1
position: 656009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663465:1
position: 663465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656009-656133:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:656622-656673:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:657462-657535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:658044-658145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659570-659713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:660512-660563:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:661700-661773:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:663118-663207:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:663417-663465:1:exon

LOC108981171
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108981171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC108981171 isoform X2
translation: MANSLVTGLRTLFAVLGCAMVATLIFTIFVDGLPFRKELLTPWMAATLVDFYINVVPLAVWVLYKESTWLSAILWIILLACFGSITTCAYILMQFLKLSSQESLQDPMYYVLLRHTDKVNMEQKMKHSSVVTLRIVFVALGCLMTGTLLYTLLTDGSPFRKELFTPWMLATLIDFYINVVALSVWVYYKESNWISSIFWIILLISFGSITTCVYIAWKLFQLSPQDPAYLVLLSSGSRKQV
SIO_010081: LOC108981171
subclass of: SO_0000673
so part of: LOC108981171
location: join(656009..656133,656622..656673,657462..657535,658044..658145,659570..659713,660512..660563,661700..661773,663118..663207,663422..663434)
location: region:656009-663434:1
so has part: feature:656009-656133:1:exon
so has part: feature:656622-656673:1:exon
so has part: feature:657462-657535:1:exon
so has part: feature:658044-658145:1:exon
so has part: feature:659570-659713:1:exon
so has part: feature:660512-660563:1:exon
so has part: feature:661700-661773:1:exon
so has part: feature:663118-663207:1:exon
so has part: feature:663422-663434:1:exon

XP_035541809.1
type: Protein
SIO_000068: ncbiprotein

position:663434:1
position: 663434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656009-656133:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:656622-656673:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:657462-657535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:658044-658145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659570-659713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:660512-660563:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:661700-661773:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:663118-663207:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:663422-663434:1:exon

LOC108981170
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108981170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(663716..667347)
location: region:663716-667347:-1
so has part: feature:663716-667347:-1:exon
subclass of: SO_0000010

108981170
type: Gene
SIO_000068: ncbigene

position:663716:-1
position: 663716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667347:-1
position: 667347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663716-667347:-1:exon

LOC108981170
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108981170
product: putative laccase-9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_018952257.2
SIO_010081: LOC108981170
subclass of: SO_0000673
so part of: LOC108981170
location: complement(join(663716..664153,664396..664754,664936..665530,665618..665743,665941..666185,666850..667001,667089..667347))
location: region:663716-667347:-1
so has part: feature:667089-667347:-1:exon
so has part: feature:666850-667001:-1:exon
so has part: feature:665941-666185:-1:exon
so has part: feature:665618-665743:-1:exon
so has part: feature:664936-665530:-1:exon
so has part: feature:664396-664754:-1:exon
so has part: feature:663716-664153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:667089-667347:-1:exon

position:667089:-1
position: 667089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:666850-667001:-1:exon

position:666850:-1
position: 666850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667001:-1
position: 667001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:665941-666185:-1:exon

position:665941:-1
position: 665941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666185:-1
position: 666185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:665618-665743:-1:exon

position:665618:-1
position: 665618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665743:-1
position: 665743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:664936-665530:-1:exon

position:664936:-1
position: 664936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665530:-1
position: 665530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:664396-664754:-1:exon

position:664396:-1
position: 664396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664754:-1
position: 664754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:663716-664153:-1:exon

position:664153:-1
position: 664153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC108981170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108981170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative laccase-9
translation: MSLASASTEADQADSLRSEKGSMALTSGFLGIGLLLIICWMLPGLAQANMIHYYDFVLKEINFTRLCSSKSLLVVNESLPGPVIRVTKGDTVYVNVHNQGSYGVTIHWHGVHQPRNPWSDGPEYITQCPIEPSSNFTYEIIFSDEEGTLWWHAHSDWTRAGVHGAIVVLPSNNTGFPFPQPDAEEIVVLGSWYKGDVNAEVAEDLEAGADTPRSNSYIINGQPGDFLPCSNQSTYKWRVDYGKTYLLRLVNAAMNAELYFAIAQHSLTVVGMDGSYLKPVETDFVMISPGQTMDILVKANQPLGRYYIAARQFDSARPDVTDYDQTNATAILEYSGNYSTSSSTPIFPSSLPTYQDIKSALNFTNRLRSLADQDHPVNIPINITTRMYITVTMNNVVFDYEGVSSSALSSALNNVSWINQDTDVLLAYYRNLSGFYTTDFPDFPPSFFNFTALDVPDNATDTIQGTKVKMLDYNEEVEIVFQGTNVFDASEDHPMHLHGYTFYVVGSGGGNFDNETDPKGYNLVDPPKMNTVSVPKNGWLALRFKASNPGVWLWHCHLDRHLSWGMNTVFIVRNGDTPETSIREPPPYLPPCTGSSPIQLLHFDNSNENKLNTIN
SIO_010081: LOC108981170
subclass of: SO_0000673
so part of: LOC108981170
location: complement(join(663954..664153,664396..664754,664936..665530,665618..665743,665941..666185,666850..667001,667089..667259))
location: region:663954-667259:-1
so has part: feature:667089-667259:-1:exon
so has part: feature:666850-667001:-1:exon
so has part: feature:665941-666185:-1:exon
so has part: feature:665618-665743:-1:exon
so has part: feature:664936-665530:-1:exon
so has part: feature:664396-664754:-1:exon
so has part: feature:663954-664153:-1:exon

XP_018807802.2
type: Protein
SIO_000068: ncbiprotein

position:663954:-1
position: 663954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667259:-1
position: 667259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667089-667259:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:666850-667001:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:665941-666185:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665618-665743:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:664936-665530:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:664396-664754:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:663954-664153:-1:exon

LOC108981166
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108981166
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(675761..681384)
location: region:675761-681384:-1
so has part: feature:675761-681384:-1:exon
subclass of: SO_0000010

108981166
type: Gene
SIO_000068: ncbigene

position:675761:-1
position: 675761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681384:-1
position: 681384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675761-681384:-1:exon

LOC108981166
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108981166
product: polyadenylate-binding protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_018952251.2
SIO_010081: LOC108981166
subclass of: SO_0000673
so part of: LOC108981166
location: complement(join(675761..676270,676674..676898,677411..677704,678640..678729,678838..678915,679091..679869,680909..681384))
location: region:675761-681384:-1
so has part: feature:680909-681384:-1:exon
so has part: feature:679091-679869:-1:exon
so has part: feature:678838-678915:-1:exon
so has part: feature:678640-678729:-1:exon
so has part: feature:677411-677704:-1:exon
so has part: feature:676674-676898:-1:exon
so has part: feature:675761-676270:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:680909-681384:-1:exon

position:680909:-1
position: 680909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:679091-679869:-1:exon

position:679091:-1
position: 679091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679869:-1
position: 679869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:678838-678915:-1:exon

position:678838:-1
position: 678838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678915:-1
position: 678915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:678640-678729:-1:exon

position:678640:-1
position: 678640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678729:-1
position: 678729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:677411-677704:-1:exon

position:677411:-1
position: 677411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677704:-1
position: 677704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:676674-676898:-1:exon

position:676674:-1
position: 676674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676898:-1
position: 676898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:675761-676270:-1:exon

position:676270:-1
position: 676270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC108981166
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108981166
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein 3-like
translation: MAADISAPSTSTSQPPPSPEAAIGVPANLALYVGDLDPSVDEGQLFDLFGQVATVVSIRVFRDHTRASSLGYAYVNYAHPHEAARALERLNYTLINGKPIRIMYSHRDSTIRRSGYANVFIKNLDTSIDNKALHDTFAVFGTVLSSKVVVDSNGQSKGHGYVQFENEESAQNAIKQLNGMLINDKKVYVGLFVRRDERTEATGLPKFTNVYVKNLPEKTTNEDLKKLFSSYGTITSAVVMTDTNGKSKCFGFVNFQSPDDAAVAVEKLNGATAFDDKVLFVGRAQSRGEREAELKEKFEQERISRYEKSQGANLYLKNLDDNVNDDKLKELFSEFGTITSCKVMVDSQGHSKGYGFVAFSSPQEAAKALEEMNGKMIGRKPLYVAVAQRKEDRKAQLQAHFSQIRTHSGMAQMPAGIAGFHPGVPRFSPQHLYFGQGNPGLLPPQPYGFQQQLFHGMRPGIAPNFMMPYHLQRQGQPGQQMGVRRVGNLQQVQQQQLMHHNPHQGFRYVGSSRTGMDASVVSQGVIGPVMSLPFDGLGRPATPIDIQRPGHVHTSALLSALASASPENQRAMLGEQLYPHVEQLEPNNAAKVTGMLLEMDKSEVIHLLESPDALKQKVAEAMEVLHKAASESSVSDRLGSLALND
SIO_010081: LOC108981166
subclass of: SO_0000673
so part of: LOC108981166
location: complement(join(676046..676270,676674..676898,677411..677704,678640..678729,678838..678915,679091..679869,680909..681155))
location: region:676046-681155:-1
so has part: feature:680909-681155:-1:exon
so has part: feature:679091-679869:-1:exon
so has part: feature:678838-678915:-1:exon
so has part: feature:678640-678729:-1:exon
so has part: feature:677411-677704:-1:exon
so has part: feature:676674-676898:-1:exon
so has part: feature:676046-676270:-1:exon

XP_018807796.2
type: Protein
SIO_000068: ncbiprotein

position:676046:-1
position: 676046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681155:-1
position: 681155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:680909-681155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:679091-679869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:678838-678915:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:678640-678729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:677411-677704:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:676674-676898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:676046-676270:-1:exon

LOC108981165
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108981165
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 685413..688246
location: region:685413-688246:1
so has part: feature:685413-688246:1:exon
subclass of: SO_0000010

108981165
type: Gene
SIO_000068: ncbigene

position:685413:1
position: 685413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688246:1
position: 688246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685413-688246:1:exon

LOC108981165
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108981165
product: DEAD-box ATP-dependent RNA helicase 39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_035685917.1
SIO_010081: LOC108981165
subclass of: SO_0000673
so part of: LOC108981165
location: join(685413..686010,686963..687037,687140..687316,687420..687560,687634..688246)
location: region:685413-688246:1
so has part: feature:685413-686010:1:exon
so has part: feature:686963-687037:1:exon
so has part: feature:687140-687316:1:exon
so has part: feature:687420-687560:1:exon
so has part: feature:687634-688246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685413-686010:1:exon

position:686010:1
position: 686010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:686963-687037:1:exon

position:686963:1
position: 686963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687037:1
position: 687037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:687140-687316:1:exon

position:687140:1
position: 687140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687316:1
position: 687316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:687420-687560:1:exon

position:687420:1
position: 687420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687560:1
position: 687560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:687634-688246:1:exon

position:687634:1
position: 687634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108981165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108981165
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DEAD-box ATP-dependent RNA helicase 39-like
translation: MQGRSKDFLSLSISLLPRIKRQPLSPTRALFDFCPLSTTTITNPDNDKAPNSESNNRDPILLEKFRQRTLKVSSTTPEKKPPPQPSPTPGSSPAYEKDNLQKEGGPTKVVNSFGELGLSEEVIEAVEEMGAFVPTEIQCVGIPAIFEGKSVVMSAQPNSGRTLAYLLPLVQLMRRGPKPKHPQAVVLCATEELSDEVFDMAKFISYYAQLKSTKENGSPQKNLSNVPIGMIVGTPGEVLQHIEEGIVVLDEIKYLVLDEVDAMFGFGLGPDIQKIIIPLRYHSSKSDDQGIQTILVTSTIAKILGKGHSPFLERLEHDHAGQIAAMLLEVDRTEVYHLTESLDALKKKVAEAIISLNTTGSES
SIO_010081: LOC108981165
subclass of: SO_0000673
so part of: LOC108981165
location: join(685498..686010,686963..687037,687140..687316,687420..687560,687634..687819)
location: region:685498-687819:1
so has part: feature:685498-686010:1:exon
so has part: feature:686963-687037:1:exon
so has part: feature:687140-687316:1:exon
so has part: feature:687420-687560:1:exon
so has part: feature:687634-687819:1:exon

XP_035541810.1
type: Protein
SIO_000068: ncbiprotein

position:685498:1
position: 685498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687819:1
position: 687819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685498-686010:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:686963-687037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687140-687316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:687420-687560:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:687634-687819:1:exon

LOC108981168
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108981168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 689013..696187
location: region:689013-696187:1
so has part: feature:689013-696187:1:exon
subclass of: SO_0000010

108981168
type: Gene
SIO_000068: ncbigene

position:689013:1
position: 689013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696187:1
position: 696187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689013-696187:1:exon

LOC108981168
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51240
gene: LOC108981168
product: DEAD-box ATP-dependent RNA helicase 39-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_004798455.1
SIO_010081: LOC108981168
so part of: LOC108981168
location: join(689013..689636,690234..690329,690415..690603,690801..690941,691254..691394,692590..692732,693865..693994,694121..694169,694744..695227,695792..696187)
location: region:689013-696187:1
so has part: feature:689013-689636:1:exon
so has part: feature:690234-690329:1:exon
so has part: feature:690415-690603:1:exon
so has part: feature:690801-690941:1:exon
so has part: feature:691254-691394:1:exon
so has part: feature:692590-692732:1:exon
so has part: feature:693865-693994:1:exon
so has part: feature:694121-694169:1:exon
so has part: feature:694744-695227:1:exon
so has part: feature:695792-696187:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:689013-689636:1:exon

position:689636:1
position: 689636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:690234-690329:1:exon

position:690234:1
position: 690234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690329:1
position: 690329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:690415-690603:1:exon

position:690415:1
position: 690415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690603:1
position: 690603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:690801-690941:1:exon

position:690801:1
position: 690801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690941:1
position: 690941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:691254-691394:1:exon

position:691254:1
position: 691254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691394:1
position: 691394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:692590-692732:1:exon

position:692590:1
position: 692590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692732:1
position: 692732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:693865-693994:1:exon

position:693865:1
position: 693865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693994:1
position: 693994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:694121-694169:1:exon

position:694121:1
position: 694121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694169:1
position: 694169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:694744-695227:1:exon

position:694744:1
position: 694744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695227:1
position: 695227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:695792-696187:1:exon

position:695792:1
position: 695792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108981168
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51240
gene: LOC108981168
product: DEAD-box ATP-dependent RNA helicase 39-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004798454.1
SIO_010081: LOC108981168
so part of: LOC108981168
location: join(689020..689636,690234..690329,690415..690603,690801..690941,691254..691394,692590..692732,693865..693994,694121..694169,694744..695227,695644..696187)
location: region:689020-696187:1
so has part: feature:689020-689636:1:exon
so has part: feature:690234-690329:1:exon
so has part: feature:690415-690603:1:exon
so has part: feature:690801-690941:1:exon
so has part: feature:691254-691394:1:exon
so has part: feature:692590-692732:1:exon
so has part: feature:693865-693994:1:exon
so has part: feature:694121-694169:1:exon
so has part: feature:694744-695227:1:exon
so has part: feature:695644-696187:1:exon

position:689020:1
position: 689020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689020-689636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:690234-690329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:690415-690603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:690801-690941:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:691254-691394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:692590-692732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:693865-693994:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:694121-694169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:694744-695227:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:695644-696187:1:exon

position:695644:1
position: 695644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108981168
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108981168
product: DEAD-box ATP-dependent RNA helicase 39-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_035685918.1
SIO_010081: LOC108981168
subclass of: SO_0000673
so part of: LOC108981168
location: join(689020..689636,690234..690329,690415..690603,690801..690941,691254..691394,692590..692732,693865..693994,694121..694169,694744..695341)
location: region:689020-695341:1
so has part: feature:689020-689636:1:exon
so has part: feature:690234-690329:1:exon
so has part: feature:690415-690603:1:exon
so has part: feature:690801-690941:1:exon
so has part: feature:691254-691394:1:exon
so has part: feature:692590-692732:1:exon
so has part: feature:693865-693994:1:exon
so has part: feature:694121-694169:1:exon
so has part: feature:694744-695341:1:exon

position:695341:1
position: 695341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689020-689636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:690234-690329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:690415-690603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:690801-690941:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:691254-691394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:692590-692732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:693865-693994:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:694121-694169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:694744-695341:1:exon

LOC108981168
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108981168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DEAD-box ATP-dependent RNA helicase 39-like
translation: MGGTARTLLALSLSSNLFALSRLSPAPKRFSLPKTTRVFVGFRPLCTTITPTTPTTSLAEPEQMKHSILLERLRLRHLKESAKPPQTRNPKSATAAGSENEDGSKKKKTGKRVVESFEELGLSEEAMGAVRELGIEVPTEIQSIGIPAVFEGKSVVLGSHTGSGKTLAYMLPLVQLLRRDEALFGMLTRPRRPRAVVLCPTRELSEQVFRVAKSIGHHARFRCTMVSGGGRLRPQEDSLNNPIDMVVGTPGRVLQHIEEGNIVYGDIKYLVLDEADTMFDRGFGPEIRKFLGPLKNRASKADSEGFQTILVTATMTKAVQNLIDEEFEGIVHLRTSTLHKKVASARHDFIKLSGSENKMEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAEQRVENLNRFKSNEGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDLLLATRIEEAMRKNESLESLTTDHVRRDVARARITGNKVMNAKSLKVSQQKNKVVVKGKKTSAPAKSTKPAVQVSKSIKSSTASTSRKPSSGGKKQTASRRSSSVQSTTTKLSVVGFRGRNSWTNKKGGTVSR
SIO_010081: LOC108981168
subclass of: SO_0000673
so part of: LOC108981168
location: join(689112..689636,690234..690329,690415..690603,690801..690941,691254..691394,692590..692732,693865..693994,694121..694169,694744..695177)
location: region:689112-695177:1
so has part: feature:689112-689636:1:exon
so has part: feature:690234-690329:1:exon
so has part: feature:690415-690603:1:exon
so has part: feature:690801-690941:1:exon
so has part: feature:691254-691394:1:exon
so has part: feature:692590-692732:1:exon
so has part: feature:693865-693994:1:exon
so has part: feature:694121-694169:1:exon
so has part: feature:694744-695177:1:exon

XP_035541811.1
type: Protein
SIO_000068: ncbiprotein

position:689112:1
position: 689112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695177:1
position: 695177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689112-689636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:690234-690329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:690415-690603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:690801-690941:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:691254-691394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:692590-692732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:693865-693994:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:694121-694169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:694744-695177:1:exon

LOC108981167
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC108981167
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 697067..699129
location: region:697067-699129:1
so has part: feature:697067-699129:1:exon
subclass of: SO_0000010

108981167
type: Gene
SIO_000068: ncbigene

position:697067:1
position: 697067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:699129:1
position: 699129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697067-699129:1:exon

LOC108981167
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC108981167
product: uncharacterized LOC108981167
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_018952253.2
SIO_010081: LOC108981167
subclass of: SO_0000673
so part of: LOC108981167
location: join(697067..697656,698740..699129)
location: region:697067-699129:1
so has part: feature:697067-697656:1:exon
so has part: feature:698740-699129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:697067-697656:1:exon

position:697656:1
position: 697656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:698740-699129:1:exon

position:698740:1
position: 698740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108981167
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC108981167
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC108981167
translation: MHHRAQISLCKLFSRYPFQRSLIPSSSSSLNSLAMISTQLVSGSVPFRRPEFTVTPTSNFHHFRHPTLSKSIVQLMKYSAQPGGSVAEFDQNREVDMINLKFAEAREEIEMAMESKETVYFDEEAECARAAVKEVLDMFNGLLAKLPESERAALQRSMGLKIEQLKAELQQLNE
SIO_010081: LOC108981167
subclass of: SO_0000673
so part of: LOC108981167
location: 697128..697652
location: region:697128-697652:1
so has part: feature:697128-697652:1:exon

XP_018807798.1
type: Protein
SIO_000068: ncbiprotein

position:697128:1
position: 697128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697652:1
position: 697652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697128-697652:1:exon

LOC109010268
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109010268
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(703274..707101)
location: region:703274-707101:-1
so has part: feature:703274-707101:-1:exon

109010268
type: Gene
SIO_000068: ncbigene

position:703274:-1
position: 703274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707101:-1
position: 707101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703274-707101:-1:exon

LOC109010268
type: Exon
subclass of: SO_0000147
RO_0002162: 51240
gene: LOC109010268
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109010268
subclass of: SO_0000673
so part of: LOC109010268
location: complement(703274..703800)
location: region:703274-703800:-1
so has part: feature:703274-703800:-1:exon

position:703800:-1
position: 703800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703274-703800:-1:exon

LOC109010268
type: Exon
subclass of: SO_0000147
RO_0002162: 51240
gene: LOC109010268
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109010268
subclass of: SO_0000673
so part of: LOC109010268
location: complement(704241..707101)
location: region:704241-707101:-1
so has part: feature:704241-707101:-1:exon

position:704241:-1
position: 704241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704241-707101:-1:exon

LOC109010254
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109010254
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(709326..713606)
location: region:709326-713606:-1
so has part: feature:709326-713606:-1:exon
subclass of: SO_0000011

109010254
type: Gene
SIO_000068: ncbigene

position:709326:-1
position: 709326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713606:-1
position: 713606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709326-713606:-1:exon

LOC109010254
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51240
nc RNA class: lncRNA
gene: LOC109010254
product: uncharacterized LOC109010254, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004798456.1
SIO_010081: LOC109010254
subclass of: SO_0000673
so part of: LOC109010254
location: complement(join(709326..709908,710054..710183,710288..710356,710797..710868,713479..713606))
location: region:709326-713606:-1
so has part: feature:713479-713606:-1:exon
so has part: feature:710797-710868:-1:exon
so has part: feature:710288-710356:-1:exon
so has part: feature:710054-710183:-1:exon
so has part: feature:709326-709908:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:713479-713606:-1:exon

position:713479:-1
position: 713479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:710797-710868:-1:exon

position:710797:-1
position: 710797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710868:-1
position: 710868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:710288-710356:-1:exon

position:710288:-1
position: 710288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710356:-1
position: 710356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:710054-710183:-1:exon

position:710054:-1
position: 710054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710183:-1
position: 710183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:709326-709908:-1:exon

position:709908:-1
position: 709908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109010254
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 51240
nc RNA class: lncRNA
gene: LOC109010254
product: uncharacterized LOC109010254, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004798457.1
SIO_010081: LOC109010254
subclass of: SO_0000673
so part of: LOC109010254
location: complement(join(709326..709908,710054..710183,710288..710356,710797..710868,711846..712078))
location: region:709326-712078:-1
so has part: feature:711846-712078:-1:exon
so has part: feature:710797-710868:-1:exon
so has part: feature:710288-710356:-1:exon
so has part: feature:710054-710183:-1:exon
so has part: feature:709326-709908:-1:exon

position:712078:-1
position: 712078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:711846-712078:-1:exon

position:711846:-1
position: 711846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:710797-710868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:710288-710356:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710054-710183:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:709326-709908:-1:exon

LOC109010255
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109010255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 728784..735198
location: region:728784-735198:1
so has part: feature:728784-735198:1:exon
subclass of: SO_0000010

109010255
type: Gene
SIO_000068: ncbigene

position:728784:1
position: 728784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735198:1
position: 735198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:728784-735198:1:exon

LOC109010255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109010255
product: type IV inositol polyphosphate 5-phosphatase 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035685919.1
SIO_010081: LOC109010255
subclass of: SO_0000673
so part of: LOC109010255
location: join(728784..728942,729092..729209,729657..729716,730594..730666,730785..730889,732022..732883,732959..733179,733664..733772,734140..734282,734455..734689,734823..735198)
location: region:728784-735198:1
so has part: feature:728784-728942:1:exon
so has part: feature:729092-729209:1:exon
so has part: feature:729657-729716:1:exon
so has part: feature:730594-730666:1:exon
so has part: feature:730785-730889:1:exon
so has part: feature:732022-732883:1:exon
so has part: feature:732959-733179:1:exon
so has part: feature:733664-733772:1:exon
so has part: feature:734140-734282:1:exon
so has part: feature:734455-734689:1:exon
so has part: feature:734823-735198:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:728784-728942:1:exon

position:728942:1
position: 728942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:729092-729209:1:exon

position:729092:1
position: 729092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729209:1
position: 729209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:729657-729716:1:exon

position:729657:1
position: 729657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729716:1
position: 729716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:730594-730666:1:exon

position:730594:1
position: 730594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730666:1
position: 730666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:730785-730889:1:exon

position:730785:1
position: 730785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730889:1
position: 730889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:732022-732883:1:exon

position:732022:1
position: 732022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732883:1
position: 732883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:732959-733179:1:exon

position:732959:1
position: 732959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733179:1
position: 733179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:733664-733772:1:exon

position:733664:1
position: 733664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733772:1
position: 733772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:734140-734282:1:exon

position:734140:1
position: 734140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734282:1
position: 734282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:734455-734689:1:exon

position:734455:1
position: 734455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734689:1
position: 734689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:734823-735198:1:exon

position:734823:1
position: 734823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109010255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109010255
product: type IV inositol polyphosphate 5-phosphatase 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_035685920.1
SIO_010081: LOC109010255
subclass of: SO_0000673
so part of: LOC109010255
location: join(728784..728942,729092..729209,729657..729716,730594..730666,730785..730889,732022..732883,732995..733179,733664..733772,734140..734282,734455..734689,734823..735198)
location: region:728784-735198:1
so has part: feature:728784-728942:1:exon
so has part: feature:729092-729209:1:exon
so has part: feature:729657-729716:1:exon
so has part: feature:730594-730666:1:exon
so has part: feature:730785-730889:1:exon
so has part: feature:732022-732883:1:exon
so has part: feature:732995-733179:1:exon
so has part: feature:733664-733772:1:exon
so has part: feature:734140-734282:1:exon
so has part: feature:734455-734689:1:exon
so has part: feature:734823-735198:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:728784-728942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729092-729209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729657-729716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730594-730666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:730785-730889:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:732022-732883:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:732995-733179:1:exon

position:732995:1
position: 732995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:733664-733772:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:734140-734282:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:734455-734689:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:734823-735198:1:exon

LOC109010255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109010255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type IV inositol polyphosphate 5-phosphatase 3-like isoform X1
translation: MKQRSKHQTELFWPRVVMRKWLNISSKDSDFSADEDDCDIDSGSDSEGEGFRQQERESRLRGNKGDDPQDGLPRSRRRNSETFRAQYIDNEELRICVVTWNVGGKLPPEDLDIDDWLHVNEPADMYVMGLQEIVPLNAGNIFGAEDNRPVPRWENIIRETLNRIRPKATTIKSFSDPPSPSKFRPSDDIPDIEEEMLLESDSDVGEEVHPLNEEPNDFDGGKDRPITDQQNKCLSFGVSDCPGSVKLGLPGEELQRQFSSPKRLDRLNCLRTEQSEDHVETSVSQNSGKLTRMLSGCERIGLSWPEPPLNLLSQCVLERPNSFRSIRSFRASQSFRTYGSFKSTKNEVPSQMALLAEIDLESLLKRKRRSSYVRIVSKQMVGIFLTIWVRRSLRRHIQNLKVSTVGVGVMGYIGNKSFRFQDSSSIFQGSISVSMSIHQTLFCFICTHLTSGEKEGDELKRNADVREIHRRTHFHSISDIRLPRTINDHERIIWLGDLNYRINLSYEKTREFISKKEWSKLVEKDQLVRELKKGRAFDGWSEGTLNFPPTYKYEINSENYYGEDPKAGRRTPAWCDRILSYGKGMRLLSYRRTELKLSDHRPVTATYMADVEVFSHRKLQKALTLTDAETESEDVIANMGIDVGMSCLRFGEDIPDRDR
SIO_010081: LOC109010255
subclass of: SO_0000673
so part of: LOC109010255
location: join(728913..728942,729092..729209,729657..729716,730594..730666,730785..730889,732022..732883,732959..733179,733664..733772,734140..734282,734455..734689,734823..734846)
location: region:728913-734846:1
so has part: feature:728913-728942:1:exon
so has part: feature:729092-729209:1:exon
so has part: feature:729657-729716:1:exon
so has part: feature:730594-730666:1:exon
so has part: feature:730785-730889:1:exon
so has part: feature:732022-732883:1:exon
so has part: feature:732959-733179:1:exon
so has part: feature:733664-733772:1:exon
so has part: feature:734140-734282:1:exon
so has part: feature:734455-734689:1:exon
so has part: feature:734823-734846:1:exon

XP_035541812.1
type: Protein
SIO_000068: ncbiprotein

position:728913:1
position: 728913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734846:1
position: 734846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:728913-728942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729092-729209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729657-729716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730594-730666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:730785-730889:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:732022-732883:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:732959-733179:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:733664-733772:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:734140-734282:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:734455-734689:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:734823-734846:1:exon

LOC109010255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109010255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type IV inositol polyphosphate 5-phosphatase 3-like isoform X2
translation: MKQRSKHQTELFWPRVVMRKWLNISSKDSDFSADEDDCDIDSGSDSEGEGFRQQERESRLRGNKGDDPQDGLPRSRRRNSETFRAQYIDNEELRICVVTWNVGGKLPPEDLDIDDWLHVNEPADMYVMGLQEIVPLNAGNIFGAEDNRPVPRWENIIRETLNRIRPKATTIKSFSDPPSPSKFRPSDDIPDIEEEMLLESDSDVGEEVHPLNEEPNDFDGGKDRPITDQQNKCLSFGVSDCPGSVKLGLPGEELQRQFSSPKRLDRLNCLRTEQSEDHVETSVSQNSGKLTRMLSGCERIGLSWPEPPLNLLSQCVLERPNSFRSIRSFRASQSFRTYGSFKSTKNEVPSQMALLAEIDLESLLKRKRRSSYVRIVSKQMVGIFLTIWVRRSLRRHIQNLKVSTVGVGVMGYIGNKGSISVSMSIHQTLFCFICTHLTSGEKEGDELKRNADVREIHRRTHFHSISDIRLPRTINDHERIIWLGDLNYRINLSYEKTREFISKKEWSKLVEKDQLVRELKKGRAFDGWSEGTLNFPPTYKYEINSENYYGEDPKAGRRTPAWCDRILSYGKGMRLLSYRRTELKLSDHRPVTATYMADVEVFSHRKLQKALTLTDAETESEDVIANMGIDVGMSCLRFGEDIPDRDR
SIO_010081: LOC109010255
subclass of: SO_0000673
so part of: LOC109010255
location: join(728913..728942,729092..729209,729657..729716,730594..730666,730785..730889,732022..732883,732995..733179,733664..733772,734140..734282,734455..734689,734823..734846)
location: region:728913-734846:1
so has part: feature:728913-728942:1:exon
so has part: feature:729092-729209:1:exon
so has part: feature:729657-729716:1:exon
so has part: feature:730594-730666:1:exon
so has part: feature:730785-730889:1:exon
so has part: feature:732022-732883:1:exon
so has part: feature:732995-733179:1:exon
so has part: feature:733664-733772:1:exon
so has part: feature:734140-734282:1:exon
so has part: feature:734455-734689:1:exon
so has part: feature:734823-734846:1:exon

XP_035541813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:728913-728942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729092-729209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729657-729716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730594-730666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:730785-730889:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:732022-732883:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:732995-733179:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:733664-733772:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:734140-734282:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:734455-734689:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:734823-734846:1:exon

LOC109010255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109010255
product: type IV inositol polyphosphate 5-phosphatase 3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035685921.1
SIO_010081: LOC109010255
subclass of: SO_0000673
so part of: LOC109010255
location: join(731077..731668,732022..732883,732995..733179,733664..733772,734140..734282,734455..734689,734823..735198)
location: region:731077-735198:1
so has part: feature:731077-731668:1:exon
so has part: feature:732022-732883:1:exon
so has part: feature:732995-733179:1:exon
so has part: feature:733664-733772:1:exon
so has part: feature:734140-734282:1:exon
so has part: feature:734455-734689:1:exon
so has part: feature:734823-735198:1:exon

position:731077:1
position: 731077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731077-731668:1:exon

position:731668:1
position: 731668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:732022-732883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:732995-733179:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:733664-733772:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:734140-734282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:734455-734689:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:734823-735198:1:exon

LOC109010255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109010255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type IV inositol polyphosphate 5-phosphatase 3-like isoform X3
translation: MSTYRCILRLLRSYVPTFPNQGSSESLFQPVQTNKILQEIVPLNAGNIFGAEDNRPVPRWENIIRETLNRIRPKATTIKSFSDPPSPSKFRPSDDIPDIEEEMLLESDSDVGEEVHPLNEEPNDFDGGKDRPITDQQNKCLSFGVSDCPGSVKLGLPGEELQRQFSSPKRLDRLNCLRTEQSEDHVETSVSQNSGKLTRMLSGCERIGLSWPEPPLNLLSQCVLERPNSFRSIRSFRASQSFRTYGSFKSTKNEVPSQMALLAEIDLESLLKRKRRSSYVRIVSKQMVGIFLTIWVRRSLRRHIQNLKVSTVGVGVMGYIGNKGSISVSMSIHQTLFCFICTHLTSGEKEGDELKRNADVREIHRRTHFHSISDIRLPRTINDHERIIWLGDLNYRINLSYEKTREFISKKEWSKLVEKDQLVRELKKGRAFDGWSEGTLNFPPTYKYEINSENYYGEDPKAGRRTPAWCDRILSYGKGMRLLSYRRTELKLSDHRPVTATYMADVEVFSHRKLQKALTLTDAETESEDVIANMGIDVGMSCLRFGEDIPDRDR
SIO_010081: LOC109010255
subclass of: SO_0000673
so part of: LOC109010255
location: join(731562..731668,732022..732883,732995..733179,733664..733772,734140..734282,734455..734689,734823..734846)
location: region:731562-734846:1
so has part: feature:731562-731668:1:exon
so has part: feature:732022-732883:1:exon
so has part: feature:732995-733179:1:exon
so has part: feature:733664-733772:1:exon
so has part: feature:734140-734282:1:exon
so has part: feature:734455-734689:1:exon
so has part: feature:734823-734846:1:exon

XP_035541814.1
type: Protein
SIO_000068: ncbiprotein

position:731562:1
position: 731562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731562-731668:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:732022-732883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:732995-733179:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:733664-733772:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:734140-734282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:734455-734689:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:734823-734846:1:exon

LOC109010256
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109010256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(738375..742600)
location: region:738375-742600:-1
so has part: feature:738375-742600:-1:exon
subclass of: SO_0000010

109010256
type: Gene
SIO_000068: ncbigene

position:738375:-1
position: 738375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742600:-1
position: 742600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738375-742600:-1:exon

LOC109010256
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109010256
product: probable choline kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_035685922.1
SIO_010081: LOC109010256
subclass of: SO_0000673
so part of: LOC109010256
location: complement(join(738375..738679,738764..738864,739525..739572,739694..739811,740314..740509,740611..740732,741710..742072,742375..742600))
location: region:738375-742600:-1
so has part: feature:742375-742600:-1:exon
so has part: feature:741710-742072:-1:exon
so has part: feature:740611-740732:-1:exon
so has part: feature:740314-740509:-1:exon
so has part: feature:739694-739811:-1:exon
so has part: feature:739525-739572:-1:exon
so has part: feature:738764-738864:-1:exon
so has part: feature:738375-738679:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:742375-742600:-1:exon

position:742375:-1
position: 742375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:741710-742072:-1:exon

position:741710:-1
position: 741710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742072:-1
position: 742072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:740611-740732:-1:exon

position:740611:-1
position: 740611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740732:-1
position: 740732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:740314-740509:-1:exon

position:740314:-1
position: 740314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740509:-1
position: 740509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:739694-739811:-1:exon

position:739694:-1
position: 739694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739811:-1
position: 739811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:739525-739572:-1:exon

position:739525:-1
position: 739525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739572:-1
position: 739572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:738764-738864:-1:exon

position:738764:-1
position: 738764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738864:-1
position: 738864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:738375-738679:-1:exon

position:738679:-1
position: 738679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109010256
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109010256
product: probable choline kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_035685923.1
SIO_010081: LOC109010256
subclass of: SO_0000673
so part of: LOC109010256
location: complement(join(738375..738679,738764..738864,739525..739572,739694..739811,740314..740509,740611..740732,741710..742101,742374..742600))
location: region:738375-742600:-1
so has part: feature:742374-742600:-1:exon
so has part: feature:741710-742101:-1:exon
so has part: feature:740611-740732:-1:exon
so has part: feature:740314-740509:-1:exon
so has part: feature:739694-739811:-1:exon
so has part: feature:739525-739572:-1:exon
so has part: feature:738764-738864:-1:exon
so has part: feature:738375-738679:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:742374-742600:-1:exon

position:742374:-1
position: 742374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:741710-742101:-1:exon

position:742101:-1
position: 742101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:740611-740732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740314-740509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:739694-739811:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739525-739572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:738764-738864:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:738375-738679:-1:exon

LOC109010256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109010256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable choline kinase 1 isoform X1
translation: MGITTRDFVEDRLPEELKKVLLSVAANWGDVMDDLEALEVIKLNGAMTNEVYQINWPAKNGAVGRKVLVRVYGEGVEVFFNRDDEIRTFECISKQGKGPRLLGRFPDGRVEEFIHARTLSAADLRDPEISALIAAKMREFHNLAVPGPKNLIIWDRLRNWLCVAKSLCSSHDTQDFCLDTLGMEISMLDKELSQDYQEVGFCHNDLQYGNIMMDEETRSLTLIDYEYASYNPIAYDIANHFCEMAANYHSQTPHVLDYSQYPDLEERQRFVRIYLSSAGNQPSDAKVEQFVQDVEKYTLANHLFWGLWGIISAYVNKINFDYKEYARQRFGQYWLRKPALLGSSGKPQEDI
SIO_010081: LOC109010256
subclass of: SO_0000673
so part of: LOC109010256
location: complement(join(738560..738679,738764..738864,739525..739572,739694..739811,740314..740509,740611..740732,741710..742060))
location: region:738560-742060:-1
so has part: feature:741710-742060:-1:exon
so has part: feature:740611-740732:-1:exon
so has part: feature:740314-740509:-1:exon
so has part: feature:739694-739811:-1:exon
so has part: feature:739525-739572:-1:exon
so has part: feature:738764-738864:-1:exon
so has part: feature:738560-738679:-1:exon

XP_035541815.1
type: Protein
SIO_000068: ncbiprotein

position:738560:-1
position: 738560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742060:-1
position: 742060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741710-742060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:740611-740732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:740314-740509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:739694-739811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:739525-739572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:738764-738864:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:738560-738679:-1:exon

LOC109010256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109010256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable choline kinase 1 isoform X1
translation: MGITTRDFVEDRLPEELKKVLLSVAANWGDVMDDLEALEVIKLNGAMTNEVYQINWPAKNGAVGRKVLVRVYGEGVEVFFNRDDEIRTFECISKQGKGPRLLGRFPDGRVEEFIHARTLSAADLRDPEISALIAAKMREFHNLAVPGPKNLIIWDRLRNWLCVAKSLCSSHDTQDFCLDTLGMEISMLDKELSQDYQEVGFCHNDLQYGNIMMDEETRSLTLIDYEYASYNPIAYDIANHFCEMAANYHSQTPHVLDYSQYPDLEERQRFVRIYLSSAGNQPSDAKVEQFVQDVEKYTLANHLFWGLWGIISAYVNKINFDYKEYARQRFGQYWLRKPALLGSSGKPQEDI
SIO_010081: LOC109010256
subclass of: SO_0000673
so part of: LOC109010256
location: complement(join(738560..738679,738764..738864,739525..739572,739694..739811,740314..740509,740611..740732,741710..742060))
location: region:738560-742060:-1
so has part: feature:741710-742060:-1:exon
so has part: feature:740611-740732:-1:exon
so has part: feature:740314-740509:-1:exon
so has part: feature:739694-739811:-1:exon
so has part: feature:739525-739572:-1:exon
so has part: feature:738764-738864:-1:exon
so has part: feature:738560-738679:-1:exon

XP_035541816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:741710-742060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:740611-740732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:740314-740509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:739694-739811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:739525-739572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:738764-738864:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:738560-738679:-1:exon

LOC109010256
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51240
gene: LOC109010256
product: probable choline kinase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004798460.1
SIO_010081: LOC109010256
so part of: LOC109010256
location: complement(join(738764..738864,739012..739154,739525..739572,739694..739811,740314..740509,740611..740732,741710..742072,742375..742600))
location: region:738764-742600:-1
so has part: feature:742375-742600:-1:exon
so has part: feature:741710-742072:-1:exon
so has part: feature:740611-740732:-1:exon
so has part: feature:740314-740509:-1:exon
so has part: feature:739694-739811:-1:exon
so has part: feature:739525-739572:-1:exon
so has part: feature:739012-739154:-1:exon
so has part: feature:738764-738864:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:742375-742600:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:741710-742072:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:740611-740732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740314-740509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:739694-739811:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739525-739572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739012-739154:-1:exon

position:739012:-1
position: 739012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739154:-1
position: 739154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:738764-738864:-1:exon

LOC109010256
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51240
gene: LOC109010256
product: probable choline kinase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004798459.1
SIO_010081: LOC109010256
so part of: LOC109010256
location: complement(join(738764..738864,739012..739154,739307..739382,739525..739572,739694..739811,740314..740509,740611..740732,741710..742072,742375..742600))
location: region:738764-742600:-1
so has part: feature:742375-742600:-1:exon
so has part: feature:741710-742072:-1:exon
so has part: feature:740611-740732:-1:exon
so has part: feature:740314-740509:-1:exon
so has part: feature:739694-739811:-1:exon
so has part: feature:739525-739572:-1:exon
so has part: feature:739307-739382:-1:exon
so has part: feature:739012-739154:-1:exon
so has part: feature:738764-738864:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:742375-742600:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:741710-742072:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:740611-740732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740314-740509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:739694-739811:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739525-739572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739307-739382:-1:exon

position:739307:-1
position: 739307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739382:-1
position: 739382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:739012-739154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:738764-738864:-1:exon

LOC109010256
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 51240
gene: LOC109010256
product: probable choline kinase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004798458.1
SIO_010081: LOC109010256
so part of: LOC109010256
location: complement(join(738764..738864,739012..739154,739246..739382,739525..739572,739694..739811,740314..740509,740611..740732,741710..742072,742375..742600))
location: region:738764-742600:-1
so has part: feature:742375-742600:-1:exon
so has part: feature:741710-742072:-1:exon
so has part: feature:740611-740732:-1:exon
so has part: feature:740314-740509:-1:exon
so has part: feature:739694-739811:-1:exon
so has part: feature:739525-739572:-1:exon
so has part: feature:739246-739382:-1:exon
so has part: feature:739012-739154:-1:exon
so has part: feature:738764-738864:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:742375-742600:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:741710-742072:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:740611-740732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740314-740509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:739694-739811:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739525-739572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739246-739382:-1:exon

position:739246:-1
position: 739246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:739012-739154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:738764-738864:-1:exon

LOC109010256
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109010256
product: probable choline kinase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_035685924.1
SIO_010081: LOC109010256
subclass of: SO_0000673
so part of: LOC109010256
location: complement(join(739163..739382,739525..739572,739694..739811,740314..740509,740611..740732,741710..742072,742375..742600))
location: region:739163-742600:-1
so has part: feature:742375-742600:-1:exon
so has part: feature:741710-742072:-1:exon
so has part: feature:740611-740732:-1:exon
so has part: feature:740314-740509:-1:exon
so has part: feature:739694-739811:-1:exon
so has part: feature:739525-739572:-1:exon
so has part: feature:739163-739382:-1:exon

position:739163:-1
position: 739163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:742375-742600:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:741710-742072:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:740611-740732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740314-740509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:739694-739811:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739525-739572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739163-739382:-1:exon

LOC109010256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109010256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable choline kinase 1 isoform X2
translation: MGITTRDFVEDRLPEELKKVLLSVAANWGDVMDDLEALEVIKLNGAMTNEVYQINWPAKNGAVGRKVLVRVYGEGVEVFFNRDDEIRTFECISKQGKGPRLLGRFPDGRVEEFIHARTLSAADLRDPEISALIAAKMREFHNLAVPGPKNLIIWDRLRNWLCVAKSLCSSHDTQDFCLDTLGMEISMLDKELSQDYQEVGFCHNDLQYGNIMMDEETRSLTLIDYEYASYNPIAYDIANHFCEMAANYHSQTPHVLDYSQYPDLEERQRFVRIYLSSAGRAPIAV
SIO_010081: LOC109010256
subclass of: SO_0000673
so part of: LOC109010256
location: complement(join(739360..739382,739525..739572,739694..739811,740314..740509,740611..740732,741710..742060))
location: region:739360-742060:-1
so has part: feature:741710-742060:-1:exon
so has part: feature:740611-740732:-1:exon
so has part: feature:740314-740509:-1:exon
so has part: feature:739694-739811:-1:exon
so has part: feature:739525-739572:-1:exon
so has part: feature:739360-739382:-1:exon

XP_035541817.1
type: Protein
SIO_000068: ncbiprotein

position:739360:-1
position: 739360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741710-742060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:740611-740732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:740314-740509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:739694-739811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:739525-739572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739360-739382:-1:exon

LOC109010258
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109010258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 758758..768587
location: region:758758-768587:1
so has part: feature:758758-768587:1:exon
subclass of: SO_0000010

109010258
type: Gene
SIO_000068: ncbigene

position:758758:1
position: 758758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768587:1
position: 768587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758758-768587:1:exon

LOC109010258
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109010258
product: protein GIGANTEA-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 5 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_018991036.2
SIO_010081: LOC109010258
subclass of: SO_0000673
so part of: LOC109010258
location: join(758758..758919,759387..759494,760852..760923,761099..761153,761273..761415,761624..761898,762804..762859,763584..763824,763947..764097,764656..764865,765027..766571,767025..767093,767363..767581,767768..767860,768030..768555)
location: region:758758-768555:1
so has part: feature:758758-758919:1:exon
so has part: feature:759387-759494:1:exon
so has part: feature:760852-760923:1:exon
so has part: feature:761099-761153:1:exon
so has part: feature:761273-761415:1:exon
so has part: feature:761624-761898:1:exon
so has part: feature:762804-762859:1:exon
so has part: feature:763584-763824:1:exon
so has part: feature:763947-764097:1:exon
so has part: feature:764656-764865:1:exon
so has part: feature:765027-766571:1:exon
so has part: feature:767025-767093:1:exon
so has part: feature:767363-767581:1:exon
so has part: feature:767768-767860:1:exon
so has part: feature:768030-768555:1:exon

position:768555:1
position: 768555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758758-758919:1:exon

position:758919:1
position: 758919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:759387-759494:1:exon

position:759387:1
position: 759387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759494:1
position: 759494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:760852-760923:1:exon

position:760852:1
position: 760852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760923:1
position: 760923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:761099-761153:1:exon

position:761099:1
position: 761099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761153:1
position: 761153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:761273-761415:1:exon

position:761273:1
position: 761273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761415:1
position: 761415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:761624-761898:1:exon

position:761624:1
position: 761624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761898:1
position: 761898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:762804-762859:1:exon

position:762804:1
position: 762804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762859:1
position: 762859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:763584-763824:1:exon

position:763584:1
position: 763584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763824:1
position: 763824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:763947-764097:1:exon

position:763947:1
position: 763947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764097:1
position: 764097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:764656-764865:1:exon

position:764656:1
position: 764656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764865:1
position: 764865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:765027-766571:1:exon

position:765027:1
position: 765027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766571:1
position: 766571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:767025-767093:1:exon

position:767025:1
position: 767025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767093:1
position: 767093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:767363-767581:1:exon

position:767363:1
position: 767363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767581:1
position: 767581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:767768-767860:1:exon

position:767768:1
position: 767768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767860:1
position: 767860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:768030-768555:1:exon

position:768030:1
position: 768030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109010258
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109010258
product: protein GIGANTEA-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 5 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_018991033.2
SIO_010081: LOC109010258
subclass of: SO_0000673
so part of: LOC109010258
location: join(758762..758919,759270..759494,760852..760923,761099..761153,761273..761415,761624..761898,762804..762859,763584..763824,763947..764097,764656..764865,765027..766571,767025..767093,767363..767581,767768..767860,768030..768587)
location: region:758762-768587:1
so has part: feature:758762-758919:1:exon
so has part: feature:759270-759494:1:exon
so has part: feature:760852-760923:1:exon
so has part: feature:761099-761153:1:exon
so has part: feature:761273-761415:1:exon
so has part: feature:761624-761898:1:exon
so has part: feature:762804-762859:1:exon
so has part: feature:763584-763824:1:exon
so has part: feature:763947-764097:1:exon
so has part: feature:764656-764865:1:exon
so has part: feature:765027-766571:1:exon
so has part: feature:767025-767093:1:exon
so has part: feature:767363-767581:1:exon
so has part: feature:767768-767860:1:exon
so has part: feature:768030-768587:1:exon

position:758762:1
position: 758762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758762-758919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:759270-759494:1:exon

position:759270:1
position: 759270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:760852-760923:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761099-761153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761273-761415:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:761624-761898:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:762804-762859:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:763584-763824:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:763947-764097:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:764656-764865:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:765027-766571:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:767025-767093:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:767363-767581:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:767768-767860:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:768030-768587:1:exon

LOC109010258
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109010258
product: protein GIGANTEA-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 3 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_018991034.2
SIO_010081: LOC109010258
subclass of: SO_0000673
so part of: LOC109010258
location: join(758762..758919,759075..759167,759270..759494,760852..760923,761099..761153,761273..761415,761624..761898,762804..762859,763584..763824,763947..764097,764656..764865,765027..766571,767025..767093,767363..767581,767768..767860,768030..768555)
location: region:758762-768555:1
so has part: feature:758762-758919:1:exon
so has part: feature:759075-759167:1:exon
so has part: feature:759270-759494:1:exon
so has part: feature:760852-760923:1:exon
so has part: feature:761099-761153:1:exon
so has part: feature:761273-761415:1:exon
so has part: feature:761624-761898:1:exon
so has part: feature:762804-762859:1:exon
so has part: feature:763584-763824:1:exon
so has part: feature:763947-764097:1:exon
so has part: feature:764656-764865:1:exon
so has part: feature:765027-766571:1:exon
so has part: feature:767025-767093:1:exon
so has part: feature:767363-767581:1:exon
so has part: feature:767768-767860:1:exon
so has part: feature:768030-768555:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:758762-758919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:759075-759167:1:exon

position:759075:1
position: 759075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759167:1
position: 759167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:759270-759494:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:760852-760923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761099-761153:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:761273-761415:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:761624-761898:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:762804-762859:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:763584-763824:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:763947-764097:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:764656-764865:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:765027-766571:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:767025-767093:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:767363-767581:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:767768-767860:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:768030-768555:1:exon

LOC109010258
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109010258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein GIGANTEA-like
translation: MAGSSCERWIDGLQFSSLFWPPPQDSQQRKAQITAYVEYFGQFTSEQFPEDIAELICNRYPSKEKRLFDDVLATFVLHHPEHGHAVVLPIISCIIDGTLVYDRTSSPFASFISLVCPSSENEYSEQWILACGEILRVLTHYNRPIYKMEQPNSDSERSSSGCDASTSNSIDKQSSRIPLVQQERKPLRPLSPWIMDILLVAPPAIRSDYFRWCSGVMGKYAAGELKPPTLASSRGSGKHPQLMPSTPRWAVANGAGVILSVCDEEVARYETATLTAVAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEDYVSGIRLPRNWMHLHFLRAIGTAMSMRAGIAADAAAALLFRVLSQPALLFPPIRQVEGIEVQHEPLGGYISCYKKQIEVPAAEATIEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLSSSVVDLPEIIVATPLQPPMLCWNLYIPLLKVLEYLPRGSPSEACLVKIFVATVEAILQRTFPPESSREQSRKTRYLSGIGSASKNLAVAELRTMVHSLFLESCASVELSSRLLFVVLTVCVSHEAQSSGSKKPSGVESCPPNEIIEDLQAISEMQKQKKTRKLKRPGPVAAFDSYVLAAVCALACELQLFSLIPRVSNHSRSKDVSHVAKPMKISGSNDEFQNSIDSAIRHTHRILAILEALFSLKPSSIGTSWSYSSNEIIAAAMVAAHVSELFRRSKACMHALSVLMRCKWDNEIYTRASSLYNLIDIHGKAVASIVNKVEPLEAHLIHAPVRKDSLVGSDGKKQKTCENGVCFGQGQQSTTQFLDSSHSDTKSKSQRASNSNEGSGNTLGKGIANFPLDASDLANFLTMDRHIGFNCCTQVLLRSVMAEKQELCFSVVSLLWHKLIAAPETQPSAESTSAQQGWRQVVDALCNVVSASPTKASTAVVLQAEKELQPWIAKDDDQGQKMWRVNQRIVKLVVELMRNHDQPESLVILASASDLLLRATDGMLVDGEACTLPQLELLEATARAVQPVLEWGESGVAVADGLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILHTGSIKSNSKPVNINGICGPSYQYISLDVIDWQADIEKCLVWEAHSRLATGMPIQYLDTAAKELGCTISL
SIO_010081: LOC109010258
subclass of: SO_0000673
so part of: LOC109010258
location: join(759405..759494,760852..760923,761099..761153,761273..761415,761624..761898,762804..762859,763584..763824,763947..764097,764656..764865,765027..766571,767025..767093,767363..767581,767768..767860,768030..768329)
location: region:759405-768329:1
so has part: feature:759405-759494:1:exon
so has part: feature:760852-760923:1:exon
so has part: feature:761099-761153:1:exon
so has part: feature:761273-761415:1:exon
so has part: feature:761624-761898:1:exon
so has part: feature:762804-762859:1:exon
so has part: feature:763584-763824:1:exon
so has part: feature:763947-764097:1:exon
so has part: feature:764656-764865:1:exon
so has part: feature:765027-766571:1:exon
so has part: feature:767025-767093:1:exon
so has part: feature:767363-767581:1:exon
so has part: feature:767768-767860:1:exon
so has part: feature:768030-768329:1:exon

XP_018846578.1
type: Protein
SIO_000068: ncbiprotein

position:759405:1
position: 759405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768329:1
position: 768329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759405-759494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:760852-760923:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761099-761153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761273-761415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761624-761898:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762804-762859:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:763584-763824:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:763947-764097:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:764656-764865:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:765027-766571:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:767025-767093:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:767363-767581:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:767768-767860:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:768030-768329:1:exon

LOC109010258
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109010258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein GIGANTEA-like
translation: MAGSSCERWIDGLQFSSLFWPPPQDSQQRKAQITAYVEYFGQFTSEQFPEDIAELICNRYPSKEKRLFDDVLATFVLHHPEHGHAVVLPIISCIIDGTLVYDRTSSPFASFISLVCPSSENEYSEQWILACGEILRVLTHYNRPIYKMEQPNSDSERSSSGCDASTSNSIDKQSSRIPLVQQERKPLRPLSPWIMDILLVAPPAIRSDYFRWCSGVMGKYAAGELKPPTLASSRGSGKHPQLMPSTPRWAVANGAGVILSVCDEEVARYETATLTAVAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEDYVSGIRLPRNWMHLHFLRAIGTAMSMRAGIAADAAAALLFRVLSQPALLFPPIRQVEGIEVQHEPLGGYISCYKKQIEVPAAEATIEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLSSSVVDLPEIIVATPLQPPMLCWNLYIPLLKVLEYLPRGSPSEACLVKIFVATVEAILQRTFPPESSREQSRKTRYLSGIGSASKNLAVAELRTMVHSLFLESCASVELSSRLLFVVLTVCVSHEAQSSGSKKPSGVESCPPNEIIEDLQAISEMQKQKKTRKLKRPGPVAAFDSYVLAAVCALACELQLFSLIPRVSNHSRSKDVSHVAKPMKISGSNDEFQNSIDSAIRHTHRILAILEALFSLKPSSIGTSWSYSSNEIIAAAMVAAHVSELFRRSKACMHALSVLMRCKWDNEIYTRASSLYNLIDIHGKAVASIVNKVEPLEAHLIHAPVRKDSLVGSDGKKQKTCENGVCFGQGQQSTTQFLDSSHSDTKSKSQRASNSNEGSGNTLGKGIANFPLDASDLANFLTMDRHIGFNCCTQVLLRSVMAEKQELCFSVVSLLWHKLIAAPETQPSAESTSAQQGWRQVVDALCNVVSASPTKASTAVVLQAEKELQPWIAKDDDQGQKMWRVNQRIVKLVVELMRNHDQPESLVILASASDLLLRATDGMLVDGEACTLPQLELLEATARAVQPVLEWGESGVAVADGLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILHTGSIKSNSKPVNINGICGPSYQYISLDVIDWQADIEKCLVWEAHSRLATGMPIQYLDTAAKELGCTISL
SIO_010081: LOC109010258
subclass of: SO_0000673
so part of: LOC109010258
location: join(759405..759494,760852..760923,761099..761153,761273..761415,761624..761898,762804..762859,763584..763824,763947..764097,764656..764865,765027..766571,767025..767093,767363..767581,767768..767860,768030..768329)
location: region:759405-768329:1
so has part: feature:759405-759494:1:exon
so has part: feature:760852-760923:1:exon
so has part: feature:761099-761153:1:exon
so has part: feature:761273-761415:1:exon
so has part: feature:761624-761898:1:exon
so has part: feature:762804-762859:1:exon
so has part: feature:763584-763824:1:exon
so has part: feature:763947-764097:1:exon
so has part: feature:764656-764865:1:exon
so has part: feature:765027-766571:1:exon
so has part: feature:767025-767093:1:exon
so has part: feature:767363-767581:1:exon
so has part: feature:767768-767860:1:exon
so has part: feature:768030-768329:1:exon

XP_018846579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:759405-759494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:760852-760923:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761099-761153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761273-761415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761624-761898:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762804-762859:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:763584-763824:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:763947-764097:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:764656-764865:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:765027-766571:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:767025-767093:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:767363-767581:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:767768-767860:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:768030-768329:1:exon

LOC109010258
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109010258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein GIGANTEA-like
translation: MAGSSCERWIDGLQFSSLFWPPPQDSQQRKAQITAYVEYFGQFTSEQFPEDIAELICNRYPSKEKRLFDDVLATFVLHHPEHGHAVVLPIISCIIDGTLVYDRTSSPFASFISLVCPSSENEYSEQWILACGEILRVLTHYNRPIYKMEQPNSDSERSSSGCDASTSNSIDKQSSRIPLVQQERKPLRPLSPWIMDILLVAPPAIRSDYFRWCSGVMGKYAAGELKPPTLASSRGSGKHPQLMPSTPRWAVANGAGVILSVCDEEVARYETATLTAVAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEDYVSGIRLPRNWMHLHFLRAIGTAMSMRAGIAADAAAALLFRVLSQPALLFPPIRQVEGIEVQHEPLGGYISCYKKQIEVPAAEATIEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLSSSVVDLPEIIVATPLQPPMLCWNLYIPLLKVLEYLPRGSPSEACLVKIFVATVEAILQRTFPPESSREQSRKTRYLSGIGSASKNLAVAELRTMVHSLFLESCASVELSSRLLFVVLTVCVSHEAQSSGSKKPSGVESCPPNEIIEDLQAISEMQKQKKTRKLKRPGPVAAFDSYVLAAVCALACELQLFSLIPRVSNHSRSKDVSHVAKPMKISGSNDEFQNSIDSAIRHTHRILAILEALFSLKPSSIGTSWSYSSNEIIAAAMVAAHVSELFRRSKACMHALSVLMRCKWDNEIYTRASSLYNLIDIHGKAVASIVNKVEPLEAHLIHAPVRKDSLVGSDGKKQKTCENGVCFGQGQQSTTQFLDSSHSDTKSKSQRASNSNEGSGNTLGKGIANFPLDASDLANFLTMDRHIGFNCCTQVLLRSVMAEKQELCFSVVSLLWHKLIAAPETQPSAESTSAQQGWRQVVDALCNVVSASPTKASTAVVLQAEKELQPWIAKDDDQGQKMWRVNQRIVKLVVELMRNHDQPESLVILASASDLLLRATDGMLVDGEACTLPQLELLEATARAVQPVLEWGESGVAVADGLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILHTGSIKSNSKPVNINGICGPSYQYISLDVIDWQADIEKCLVWEAHSRLATGMPIQYLDTAAKELGCTISL
SIO_010081: LOC109010258
subclass of: SO_0000673
so part of: LOC109010258
location: join(759405..759494,760852..760923,761099..761153,761273..761415,761624..761898,762804..762859,763584..763824,763947..764097,764656..764865,765027..766571,767025..767093,767363..767581,767768..767860,768030..768329)
location: region:759405-768329:1
so has part: feature:759405-759494:1:exon
so has part: feature:760852-760923:1:exon
so has part: feature:761099-761153:1:exon
so has part: feature:761273-761415:1:exon
so has part: feature:761624-761898:1:exon
so has part: feature:762804-762859:1:exon
so has part: feature:763584-763824:1:exon
so has part: feature:763947-764097:1:exon
so has part: feature:764656-764865:1:exon
so has part: feature:765027-766571:1:exon
so has part: feature:767025-767093:1:exon
so has part: feature:767363-767581:1:exon
so has part: feature:767768-767860:1:exon
so has part: feature:768030-768329:1:exon

XP_018846581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:759405-759494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:760852-760923:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761099-761153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761273-761415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761624-761898:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762804-762859:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:763584-763824:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:763947-764097:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:764656-764865:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:765027-766571:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:767025-767093:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:767363-767581:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:767768-767860:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:768030-768329:1:exon

LOC109010259
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109010259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 769749..771444
location: region:769749-771444:1
so has part: feature:769749-771444:1:exon
subclass of: SO_0000010

109010259
type: Gene
SIO_000068: ncbigene

position:769749:1
position: 769749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771444:1
position: 771444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:769749-771444:1:exon

LOC109010259
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109010259
product: 40S ribosomal protein S18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 94 long SRA reads, 22 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_018991038.2
SIO_010081: LOC109010259
subclass of: SO_0000673
so part of: LOC109010259
location: join(769749..769878,769988..770148,770546..770734,771021..771444)
location: region:769749-771444:1
so has part: feature:769749-769878:1:exon
so has part: feature:769988-770148:1:exon
so has part: feature:770546-770734:1:exon
so has part: feature:771021-771444:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:769749-769878:1:exon

position:769878:1
position: 769878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:769988-770148:1:exon

position:769988:1
position: 769988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770148:1
position: 770148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:770546-770734:1:exon

position:770546:1
position: 770546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770734:1
position: 770734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:771021-771444:1:exon

position:771021:1
position: 771021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109010259
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 51240
gene: LOC109010259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S18
translation: MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVIVANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR
SIO_010081: LOC109010259
subclass of: SO_0000673
so part of: LOC109010259
location: join(769876..769878,769988..770148,770546..770734,771021..771126)
location: region:769876-771126:1
so has part: feature:769876-769878:1:exon
so has part: feature:769988-770148:1:exon
so has part: feature:770546-770734:1:exon
so has part: feature:771021-771126:1:exon

XP_018846583.1
type: Protein
SIO_000068: ncbiprotein

position:769876:1
position: 769876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771126:1
position: 771126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:769876-769878:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:769988-770148:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:770546-770734:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:771021-771126:1:exon

LOC109010260
type: Gene
subclass of: SO_0000704
RO_0002162: 51240
gene: LOC109010260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(771823..775985)
location: region:771823-775985:-1
so has part: feature:771823-775985:-1:exon
subclass of: SO_0000010

109010260
type: Gene
SIO_000068: ncbigene

position:771823:-1
position: 771823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775985:-1
position: 775985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771823-775985:-1:exon

LOC109010260
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 51240
gene: LOC109010260
product: UDP-rhamnose/UDP-galactose transporter 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_018991039.2
SIO_010081: LOC109010260
subclass of: SO_0000673
so part of: LOC109010260
location: complement(join(771823..772498,773234..773395,773780..773980,774072..774256,774996..775200,775765..775985))
location: region:771823-775985:-1
so has part: feature:775765-775985:-1:exon
so has part: feature:774996-775200:-1:exon
so has part: feature:774072-774256:-1:exon
so has part: feature:773780-773980:-1:exon
so has part: feature:773234-773395:-1:exon
so has part: feature:771823-772498:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:775765-775985:-1:exon

position:775765:-1
position: 775765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:774996-775200:-1:exon