Toxoplasma gondii RH apicoplast, complete genome.
type: Entry
definition: Toxoplasma gondii RH apicoplast, complete genome.
sequence version: NC_001799.1
sequence date: 2023-04-03
sequence: sequence
division: INV
label: NC_001799.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: apicoplast Toxoplasma gondii RH
organism: Toxoplasma gondii RH
taxonomy: Eukaryota; Sar; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Toxoplasma.
reference: 1
references: 23196113
reference: 2
references: 9045615
reference: 3
reference: 4
reference: 5
reference: 6
reference: 7
comment: PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence was derived from U87145.\nThe T. gondii apicoplast genome exhbits non-standard codon usage:\n33 in-frame UGA codons interrupt 17 of the 28 predicted coding\nregions, and are presumed to encode tryptophan. In addition, two\ngenes (rps8 and rpoC2) contain in-frame UAA or UAG stop codons\nwhich are currently being investigated further.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0001259
sequence length: 34996
topology: circular
so has quality: SO_0000988
location: 1..34996
location: region:1-34996:1
RO_0002162: 383379

NC_001799
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Evidence for a Single Origin of the 35 kb Plastid DNA in Apicomplexans
author: Denny, P.
author: Preiser, P.
author: Williamson, D.
author: Wilson, I.
journal: Protist
volume: 149
issue: 1
pages: 51-59
year: 1998
pubmed: 23196113

23196113
type: PubMed
SIO_000068: pubmed

2
title: A plastid of probable green algal origin in Apicomplexan parasites
author: Kohler, S.
author: Delwiche, C.F.
author: Denny, P.W.
author: Tilney, L.G.
author: Webster, P.
author: Wilson, R.J.
author: Palmer, J.D.
author: Roos, D.S.
journal: Science
volume: 275
issue: 5305
pages: 1485-1489
year: 1997
pubmed: 9045615

9045615
type: PubMed
SIO_000068: pubmed

3
title: Inhibition of cytoplasmic and organellar protein synthesis in Toxoplasma gondii. Implications for the target of macrolide antibiotics
author: Beckers, C.J.
author: Roos, D.S.
author: Donald, R.G.
author: Luft, B.J.
author: Schwab, J.C.
author: Cao, Y.
author: Joiner, K.A.
journal: Journal of Clin. Invest. 95, 367-376 (1995)

4
title: Mapping, cloning, and complete sequence annotation of the 35-kb plastid genome of Toxoplasma gondii
author: Kissinger, J.C.
author: Donald, R.G.
author: Moulton, A.L.
author: Gutell, R.
author: Aiello, D.P.
author: Lang-Unnasch, N.
author: Roos, D.S.
journal: Unpublished

5
title: Direct Submission
journal: Submitted (03-JUL-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

6
title: Direct Submission
author: Kissinger, J.C.
author: Donald, R.G.
author: Moulton, A.L.
author: Aiello, D.P.
author: Lang-Unnasch, N.
author: Roos, D.S.
journal: Submitted (28-JUN-1999) Biology, University of Pennsylvania, 415 S. University Ave, Philadelphia, PA 19104, USA
comments: Sequence update by submitter

7
title: Direct Submission
author: Kissinger, J.C.
author: Donald, R.G.
author: Moulton, A.L.
author: Aiello, D.P.
author: Lang-Unnasch, N.
author: Roos, D.S.
journal: Submitted (16-JAN-1997) Biology, University of Pennsylvania, 415 S. University Ave, Philadelphia, PA 19104, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34996:1
position: 34996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-34996:1:source
so part of: sequence
organism: Toxoplasma gondii RH
organelle: plastid:apicoplast
mol type: genomic DNA
strain: RH

383379
type: Taxonomy
SIO_000068: taxonomy

TogoCt31
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt31
so part of: sequence
location: complement(8..79)
location: region:8-79:-1
so has part: feature:8-79:-1:exon
subclass of: SO_0000663

1466558
type: Gene
SIO_000068: ncbigene

position:8:-1
position: 8
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79:-1
position: 79
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8-79:-1:exon

TogoCt31
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt31
product: tRNA-Ile
codon recognized: AUC
SIO_010081: TogoCt31
subclass of: SO_0000673
so part of: TogoCt31
location: complement(8..79)
location: region:8-79:-1
so has part: feature:8-79:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8-79:-1:exon

TogoCr27
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCr27
so part of: sequence
location: complement(246..1745)
location: region:246-1745:-1
so has part: feature:246-1745:-1:exon
subclass of: SO_0000573

1466559
type: Gene
SIO_000068: ncbigene

position:246:-1
position: 246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1745:-1
position: 1745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246-1745:-1:exon

TogoCr27
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 383379
locus tag: TogoCr27
product: small subunit ribosomal RNA
SIO_010081: TogoCr27
subclass of: SO_0000673
so part of: TogoCr27
location: complement(246..1745)
location: region:246-1745:-1
so has part: feature:246-1745:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246-1745:-1:exon

TogoCt32
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt32
so part of: sequence
location: complement(1795..1867)
location: region:1795-1867:-1
so has part: feature:1795-1867:-1:exon
subclass of: SO_0000663

1466560
type: Gene
SIO_000068: ncbigene

position:1795:-1
position: 1795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1867:-1
position: 1867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1795-1867:-1:exon

TogoCt32
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt32
product: tRNA-Ala
codon recognized: GCA
SIO_010081: TogoCt32
subclass of: SO_0000673
so part of: TogoCt32
location: complement(1795..1867)
location: region:1795-1867:-1
so has part: feature:1795-1867:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1795-1867:-1:exon

TogoCt33
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt33
so part of: sequence
location: 1908..1980
location: region:1908-1980:1
so has part: feature:1908-1980:1:exon
subclass of: SO_0000663

1466561
type: Gene
SIO_000068: ncbigene

position:1908:1
position: 1908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1980:1
position: 1980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1908-1980:1:exon

TogoCt33
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt33
product: tRNA-Asn
codon recognized: AAC
SIO_010081: TogoCt33
subclass of: SO_0000673
so part of: TogoCt33
location: 1908..1980
location: region:1908-1980:1
so has part: feature:1908-1980:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1908-1980:1:exon

TogoCt34
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt34
so part of: sequence
location: complement(2003..2078)
location: region:2003-2078:-1
so has part: feature:2003-2078:-1:exon
subclass of: SO_0000663

1466562
type: Gene
SIO_000068: ncbigene

position:2003:-1
position: 2003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2078:-1
position: 2078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2003-2078:-1:exon

TogoCt34
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt34
product: tRNA-Leu
codon recognized: CUA
SIO_010081: TogoCt34
subclass of: SO_0000673
so part of: TogoCt34
location: complement(2003..2078)
location: region:2003-2078:-1
so has part: feature:2003-2078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2003-2078:-1:exon

TogoCt35
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt35
so part of: sequence
location: complement(2093..2165)
location: region:2093-2165:-1
so has part: feature:2093-2165:-1:exon
subclass of: SO_0000663

1466563
type: Gene
SIO_000068: ncbigene

position:2093:-1
position: 2093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2165:-1
position: 2165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2093-2165:-1:exon

TogoCt35
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt35
product: tRNA-Arg
codon recognized: AGA
SIO_010081: TogoCt35
subclass of: SO_0000673
so part of: TogoCt35
location: complement(2093..2165)
location: region:2093-2165:-1
so has part: feature:2093-2165:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2093-2165:-1:exon

TogoCt36
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt36
so part of: sequence
location: complement(2175..2246)
location: region:2175-2246:-1
so has part: feature:2175-2246:-1:exon
subclass of: SO_0000663

1466564
type: Gene
SIO_000068: ncbigene

position:2175:-1
position: 2175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2246:-1
position: 2246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2175-2246:-1:exon

TogoCt36
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt36
product: tRNA-Val
codon recognized: GUA
SIO_010081: TogoCt36
subclass of: SO_0000673
so part of: TogoCt36
location: complement(2175..2246)
location: region:2175-2246:-1
so has part: feature:2175-2246:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2175-2246:-1:exon

TogoCt37
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt37
so part of: sequence
location: 2282..2354
location: region:2282-2354:1
so has part: feature:2282-2354:1:exon
subclass of: SO_0000663

1466565
type: Gene
SIO_000068: ncbigene

position:2282:1
position: 2282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2354:1
position: 2354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2282-2354:1:exon

TogoCt37
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt37
product: tRNA-Arg
codon recognized: CGU
SIO_010081: TogoCt37
subclass of: SO_0000673
so part of: TogoCt37
location: 2282..2354
location: region:2282-2354:1
so has part: feature:2282-2354:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2282-2354:1:exon

TogoCt38
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt38
so part of: sequence
location: 2380..2453
location: region:2380-2453:1
so has part: feature:2380-2453:1:exon
subclass of: SO_0000663

1466566
type: Gene
SIO_000068: ncbigene

position:2380:1
position: 2380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2453:1
position: 2453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2380-2453:1:exon

TogoCt38
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt38
product: tRNA-Met
codon recognized: AUG
SIO_010081: TogoCt38
subclass of: SO_0000673
so part of: TogoCt38
location: 2380..2453
location: region:2380-2453:1
so has part: feature:2380-2453:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2380-2453:1:exon

TogoCr28
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCr28
so part of: sequence
location: 2512..5198
location: region:2512-5198:1
so has part: feature:2512-5198:1:exon
subclass of: SO_0000573

1466567
type: Gene
SIO_000068: ncbigene

position:2512:1
position: 2512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5198:1
position: 5198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2512-5198:1:exon

TogoCr28
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 383379
locus tag: TogoCr28
product: large subunit ribosomal RNA
SIO_010081: TogoCr28
subclass of: SO_0000673
so part of: TogoCr28
location: 2512..5198
location: region:2512-5198:1
so has part: feature:2512-5198:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2512-5198:1:exon

TogoCt39
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt39
so part of: sequence
location: 5199..5270
location: region:5199-5270:1
so has part: feature:5199-5270:1:exon
subclass of: SO_0000663

1466568
type: Gene
SIO_000068: ncbigene

position:5199:1
position: 5199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5270:1
position: 5270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5199-5270:1:exon

TogoCt39
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt39
product: tRNA-Thr
codon recognized: ACA
SIO_010081: TogoCt39
subclass of: SO_0000673
so part of: TogoCt39
location: 5199..5270
location: region:5199-5270:1
so has part: feature:5199-5270:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5199-5270:1:exon

TogoCp01
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp01
so part of: sequence
location: 5312..5908
location: region:5312-5908:1
so has part: feature:5312-5908:1:exon
subclass of: SO_0000010

1466595
type: Gene
SIO_000068: ncbigene

position:5312:1
position: 5312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5908:1
position: 5908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5312-5908:1:exon

TogoCp01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp01
codon start: 1
transl table: 4
product: ribosomal protein S4
translation: MKKKFRTKLKKLQYFKLTFLPGFCTKLLKKELVPIKKGKTSSFRIQLLEKQKLKYNYRLKENQIKKYFKYIKLLKIFNLIQIIELRLDATIFRLGFAKSINQARQLITHGFIFINSILVKKPSFILTEKDLIYINPKKFTIILICRINLFFRYYNKYNLYIYTLCVEYLKFKLQKEFYFKLYLFIPFDENLIKYYYKF
SIO_010081: TogoCp01
subclass of: SO_0000673
so part of: TogoCp01
location: 5312..5908
location: region:5312-5908:1
so has part: feature:5312-5908:1:exon

NP_044545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5312-5908:1:exon

TogoCt40
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt40
so part of: sequence
location: 5936..6008
location: region:5936-6008:1
so has part: feature:5936-6008:1:exon
subclass of: SO_0000663

1466569
type: Gene
SIO_000068: ncbigene

position:5936:1
position: 5936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6008:1
position: 6008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5936-6008:1:exon

TogoCt40
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt40
product: tRNA-His
codon recognized: CAC
SIO_010081: TogoCt40
subclass of: SO_0000673
so part of: TogoCt40
location: 5936..6008
location: region:5936-6008:1
so has part: feature:5936-6008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5936-6008:1:exon

TogoCt41
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt41
so part of: sequence
location: 6017..6090
location: region:6017-6090:1
so has part: feature:6017-6090:1:exon
subclass of: SO_0000663

1466570
type: Gene
SIO_000068: ncbigene

position:6017:1
position: 6017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6090:1
position: 6090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6017-6090:1:exon

TogoCt41
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt41
product: tRNA-Cys
codon recognized: UGC
SIO_010081: TogoCt41
subclass of: SO_0000673
so part of: TogoCt41
location: 6017..6090
location: region:6017-6090:1
so has part: feature:6017-6090:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6017-6090:1:exon

TogoCt42
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt42
so part of: sequence
location: 6099..6362
location: region:6099-6362:1
so has part: feature:6099-6362:1:exon
subclass of: SO_0000663

1466571
type: Gene
SIO_000068: ncbigene

position:6099:1
position: 6099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6362:1
position: 6362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6099-6362:1:exon

TogoCt42
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt42
product: tRNA-Leu
note: intron located in anticodon
codon recognized: UUA
SIO_010081: TogoCt42
subclass of: SO_0000673
so part of: TogoCt42
location: join(6099..6134,6323..6362)
location: region:6099-6362:1
so has part: feature:6099-6134:1:exon
so has part: feature:6323-6362:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6099-6134:1:exon

position:6134:1
position: 6134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6323-6362:1:exon

position:6323:1
position: 6323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TogoCt42
type: Intron
subclass of: SO_0000188
RO_0002162: 383379
locus tag: TogoCt42
note: intron interrupts anticodon of tRNA-Leu
SIO_010081: TogoCt42
subclass of: SO_0000673
so part of: TogoCt42
location: 6135..6322
location: region:6135-6322:1
so has part: feature:6135-6322:1:exon

position:6135:1
position: 6135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6322:1
position: 6322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6135-6322:1:exon

TogoCt43
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt43
so part of: sequence
location: 6386..6461
location: region:6386-6461:1
so has part: feature:6386-6461:1:exon
subclass of: SO_0000663

1466572
type: Gene
SIO_000068: ncbigene

position:6386:1
position: 6386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6461:1
position: 6461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6386-6461:1:exon

TogoCt43
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt43
product: tRNA-Met
codon recognized: AUG
SIO_010081: TogoCt43
subclass of: SO_0000673
so part of: TogoCt43
location: 6386..6461
location: region:6386-6461:1
so has part: feature:6386-6461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6386-6461:1:exon

TogoCt44
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt44
so part of: sequence
location: 6493..6575
location: region:6493-6575:1
so has part: feature:6493-6575:1:exon
subclass of: SO_0000663

1466573
type: Gene
SIO_000068: ncbigene

position:6493:1
position: 6493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6575:1
position: 6575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6493-6575:1:exon

TogoCt44
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt44
product: tRNA-Tyr
codon recognized: UAC
SIO_010081: TogoCt44
subclass of: SO_0000673
so part of: TogoCt44
location: 6493..6575
location: region:6493-6575:1
so has part: feature:6493-6575:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6493-6575:1:exon

TogoCt45
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt45
so part of: sequence
location: 6610..6699
location: region:6610-6699:1
so has part: feature:6610-6699:1:exon
subclass of: SO_0000663

1466574
type: Gene
SIO_000068: ncbigene

position:6610:1
position: 6610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6699:1
position: 6699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6610-6699:1:exon

TogoCt45
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt45
product: tRNA-Ser
codon recognized: AGC
SIO_010081: TogoCt45
subclass of: SO_0000673
so part of: TogoCt45
location: 6610..6699
location: region:6610-6699:1
so has part: feature:6610-6699:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6610-6699:1:exon

TogoCt46
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt46
so part of: sequence
location: 6720..6793
location: region:6720-6793:1
so has part: feature:6720-6793:1:exon
subclass of: SO_0000663

1466593
type: Gene
SIO_000068: ncbigene

position:6720:1
position: 6720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6793:1
position: 6793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6720-6793:1:exon

TogoCt46
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt46
product: tRNA-Asp
codon recognized: GAC
SIO_010081: TogoCt46
subclass of: SO_0000673
so part of: TogoCt46
location: 6720..6793
location: region:6720-6793:1
so has part: feature:6720-6793:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6720-6793:1:exon

TogoCt47
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt47
so part of: sequence
location: complement(6825..6896)
location: region:6825-6896:-1
so has part: feature:6825-6896:-1:exon
subclass of: SO_0000663

1466575
type: Gene
SIO_000068: ncbigene

position:6825:-1
position: 6825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6896:-1
position: 6896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6825-6896:-1:exon

TogoCt47
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt47
product: tRNA-Lys
codon recognized: AAA
SIO_010081: TogoCt47
subclass of: SO_0000673
so part of: TogoCt47
location: complement(6825..6896)
location: region:6825-6896:-1
so has part: feature:6825-6896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6825-6896:-1:exon

TogoCt48
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt48
so part of: sequence
location: 6924..6996
location: region:6924-6996:1
so has part: feature:6924-6996:1:exon
subclass of: SO_0000663

1466576
type: Gene
SIO_000068: ncbigene

position:6924:1
position: 6924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6996:1
position: 6996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6924-6996:1:exon

TogoCt48
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt48
product: tRNA-Glu
codon recognized: GAA
SIO_010081: TogoCt48
subclass of: SO_0000673
so part of: TogoCt48
location: 6924..6996
location: region:6924-6996:1
so has part: feature:6924-6996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6924-6996:1:exon

TogoCt49
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt49
so part of: sequence
location: 7001..7074
location: region:7001-7074:1
so has part: feature:7001-7074:1:exon
subclass of: SO_0000663

1466577
type: Gene
SIO_000068: ncbigene

position:7001:1
position: 7001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7074:1
position: 7074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7001-7074:1:exon

TogoCt49
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt49
product: tRNA-Pro
codon recognized: CCA
SIO_010081: TogoCt49
subclass of: SO_0000673
so part of: TogoCt49
location: 7001..7074
location: region:7001-7074:1
so has part: feature:7001-7074:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7001-7074:1:exon

TogoCp02
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp02
so part of: sequence
location: 7117..7752
location: region:7117-7752:1
so has part: feature:7117-7752:1:exon
subclass of: SO_0000010

1466596
type: Gene
SIO_000068: ncbigene

position:7117:1
position: 7117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7752:1
position: 7752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7117-7752:1:exon

TogoCp02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp02
note: in frame UGA codon predicted to encode tryptophan
codon start: 1
transl table: 4
product: ribosomal protein L4
translation: MINIFLTFPIRLWDNWQIYIKNYKFIIEFWFLYNTTFSEIIKFISLNLINELNIIKNFKISNTKNKAFSSYSNKKLRQQKGSGKARIGSKKSVLQKGGSVAFGLNLKRYFNPLIKKTLFLILKYLCLNKRTNIYIININTFNKYSVNFKDYLKLQVQLNGILIHKLLCLNLTKNNLVYFKFTKQGKQINFLKSNKLTCLKLLSFKYIFIFI
SIO_010081: TogoCp02
subclass of: SO_0000673
so part of: TogoCp02
location: 7117..7752
location: region:7117-7752:1
so has part: feature:7117-7752:1:exon

NP_044546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7117-7752:1:exon

TogoCp03
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
gene: rpl2
locus tag: TogoCp03
so part of: sequence
location: 7774..8577
location: region:7774-8577:1
so has part: feature:7774-8577:1:exon
subclass of: SO_0000010

1466597
type: Gene
SIO_000068: ncbigene

position:7774:1
position: 7774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8577:1
position: 8577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7774-8577:1:exon

TogoCp03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
gene: rpl2
locus tag: TogoCp03
note: 50S ribosomal protein L2; in frame UGA codon predicted to encode tryptophan
codon start: 1
transl table: 4
product: ribosomal protein L2
translation: MILTFIKIKKYRIKYLIIKKQKAFGRNNLGFITCRAKGGGIKRNLYKILDSNFANYGMSFSSAFYVNIIYDSFRRIFLAVYFIINSIIKNIYRYFLLTKNLKIGSQINFGFKAPLKIGNALPLYKILLGSFIYNIEIRYKGKGSLVKNANHNAIILMIGDIYVTVKLPSGEIKLLLKNLFCILGQLEIRRKVNKNIKKHAGFNRKLSIRPKIRGAAMNAVDHPHGGGEGKASVGFKFARTLWGKAFKGIKTRKKNKHLSRFILQHRL
SIO_010081: TogoCp03
subclass of: SO_0000673
so part of: TogoCp03
location: 7774..8577
location: region:7774-8577:1
so has part: feature:7774-8577:1:exon

NP_044547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7774-8577:1:exon

TogoCp04
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp04
so part of: sequence
location: 8597..8809
location: region:8597-8809:1
so has part: feature:8597-8809:1:exon
subclass of: SO_0000010

1466598
type: Gene
SIO_000068: ncbigene

position:8597:1
position: 8597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8809:1
position: 8809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8597-8809:1:exon

TogoCp04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp04
note: in frame UGA codon predicted to encode tryptophan
codon start: 1
transl table: 4
product: ribosomal protein S19
translation: MIKIIYRKLFIPNYFIKKSKYLYYSIKLYYKYLIITPFLIWKLMEVYTGKSFITINITKDKIGRSLQYFC
SIO_010081: TogoCp04
subclass of: SO_0000673
so part of: TogoCp04
location: 8597..8809
location: region:8597-8809:1
so has part: feature:8597-8809:1:exon

NP_044548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8597-8809:1:exon

TogoCp05
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp05
so part of: sequence
location: 8870..9544
location: region:8870-9544:1
so has part: feature:8870-9544:1:exon
subclass of: SO_0000010

1466599
type: Gene
SIO_000068: ncbigene

position:8870:1
position: 8870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9544:1
position: 9544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8870-9544:1:exon

TogoCp05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp05
note: in frame UGA codons predicted to encode tryptophan
codon start: 1
transl table: 4
product: ribosomal protein S3
translation: MFGQRVNSLIFYSKLYSKYNNLWTIYLNSLNWNCYFLNIIKFINCLIYLKQKILLNNFNFFSLNNKYKFQLNINCIFYFYNYFLKLKIFIKEINNIKRIYKKIDNLNNLKQKYYIYINFLILKNPFSSITYLFYYVIKKFKQTLSLRKILKQLSLLILNIKKTSIKGIKILVSGKINGVVIAKKETCNYGLNYFNKYVYNIKYNVFYLKTKFGVLGFKFWIFLI
SIO_010081: TogoCp05
subclass of: SO_0000673
so part of: TogoCp05
location: 8870..9544
location: region:8870-9544:1
so has part: feature:8870-9544:1:exon

NP_044549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8870-9544:1:exon

TogoCp06
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp06
so part of: sequence
location: 9566..9955
location: region:9566-9955:1
so has part: feature:9566-9955:1:exon
subclass of: SO_0000010

1466600
type: Gene
SIO_000068: ncbigene

position:9566:1
position: 9566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9955:1
position: 9955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9566-9955:1:exon

TogoCp06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp06
note: in frame UGA codons predicted to encode tryptophan
codon start: 1
transl table: 4
product: ribosomal protein L16
translation: MIIFKHSHRRSKLLKTIKPIKLTYGVWTIKLKKFLFCKQTFIDFLKKCFKFWKKSYNFKIYKVTINTKKSLESRMGGGKGDNLYKIFSFRPGTFLLEYYNLNKYQILYLFKLISWNKKYYFKFLKKKYI
SIO_010081: TogoCp06
subclass of: SO_0000673
so part of: TogoCp06
location: 9566..9955
location: region:9566-9955:1
so has part: feature:9566-9955:1:exon

NP_044550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9566-9955:1:exon

TogoCp07
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp07
so part of: sequence
location: 9960..10181
location: region:9960-10181:1
so has part: feature:9960-10181:1:exon
subclass of: SO_0000010

1466601
type: Gene
SIO_000068: ncbigene

position:9960:1
position: 9960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10181:1
position: 10181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9960-10181:1:exon

TogoCp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp07
note: in frame UGA codon predicted to encode tryptophan
codon start: 1
transl table: 4
product: ribosomal protein S17
translation: MVIKIGYVITNKKNTKYKFILPFWKKNLKYKNIQLKIKSNFFHDSRKEFLQNFIVLVKFNCKQKKYNLIKILY
SIO_010081: TogoCp07
subclass of: SO_0000673
so part of: TogoCp07
location: 9960..10181
location: region:9960-10181:1
so has part: feature:9960-10181:1:exon

NP_044551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9960-10181:1:exon

TogoCp08
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
gene: rpl14
locus tag: TogoCp08
so part of: sequence
location: 10198..10563
location: region:10198-10563:1
so has part: feature:10198-10563:1:exon
subclass of: SO_0000010

1466602
type: Gene
SIO_000068: ncbigene

position:10198:1
position: 10198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10563:1
position: 10563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10198-10563:1:exon

TogoCp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
gene: rpl14
locus tag: TogoCp08
note: 50S ribosomal protein L14
codon start: 1
transl table: 4
product: ribosomal protein L14
translation: MTQLNSFFYVSDNTGVKKIFSIQNITRNSFLVNTTDIILGIIKEISFKSSFKYSEIVYGFVVRLKKTQNIQNRYNYIFNENAVILIDKNFNPLGTRIFGLFPENLKNNNYLKLNSLVLNII
SIO_010081: TogoCp08
subclass of: SO_0000673
so part of: TogoCp08
location: 10198..10563
location: region:10198-10563:1
so has part: feature:10198-10563:1:exon

NP_044552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10198-10563:1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 383379
note: similar to rps8; contains in-frame stop codon
so part of: sequence
location: 10615..10968
location: region:10615-10968:1
so has part: feature:10615-10968:1:region

position:10615:1
position: 10615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10968:1
position: 10968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10615-10968:1:region

TogoCp09
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp09
so part of: sequence
location: 11008..11556
location: region:11008-11556:1
so has part: feature:11008-11556:1:exon
subclass of: SO_0000010

1466603
type: Gene
SIO_000068: ncbigene

position:11008:1
position: 11008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11556:1
position: 11556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11008-11556:1:exon

TogoCp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp09
note: in frame UGA codons predicted to encode tryptophan
codon start: 1
transl table: 4
product: ribosomal protein L6
translation: MKTFKIISNIYKKNYISYFWIWDNKIKINRLILIFYNIKFILLYNNIYFFPFLNFKFLLISLFSQSNIIKKLFNLAEKNLNIDFFLKLHLIGVGYKIFYLKNILILMLNYSHIIKLKFLNFTDLNIQIEAANSIILKSINKSILGIFSSIIKLFRMNNNYDKNGIKNIYEYLKLNKLKLIKK
SIO_010081: TogoCp09
subclass of: SO_0000673
so part of: TogoCp09
location: 11008..11556
location: region:11008-11556:1
so has part: feature:11008-11556:1:exon

NP_044553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11008-11556:1:exon

TogoCp10
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp10
so part of: sequence
location: 11582..12388
location: region:11582-12388:1
so has part: feature:11582-12388:1:exon
subclass of: SO_0000010

1466604
type: Gene
SIO_000068: ncbigene

position:11582:1
position: 11582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12388:1
position: 12388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11582-12388:1:exon

TogoCp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp10
note: in frame UGA codon predicted to encode tryptophan
codon start: 1
transl table: 4
product: ribosomal protein S5
translation: MFLKKKTFFILNFNKFSKQYFKYNKNIIFNNLIKQLYNFLFYLYILKDFIFYKYFFFKNKTYWYLINIFLFLLNLNFLKLLNININNSFNTISKIKKNISLYYIYIIKILLIFNYNLFLLFFYKTNKYNKILQKIIEIKKISKTKQKGRIRRFKVLLLIGAKNAWIGIGVSKDFYLQEAINKARFFAFKKIYFFYIILEKLFYYSNTINKIKCIIIYKPIFYGIQVSFLIQIFLDLLGYNVLIIKIFKHTTKYTLINFFIKLLIDLTN
SIO_010081: TogoCp10
subclass of: SO_0000673
so part of: TogoCp10
location: 11582..12388
location: region:11582-12388:1
so has part: feature:11582-12388:1:exon

NP_044554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11582-12388:1:exon

TogoCp11
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp11
so part of: sequence
location: 12405..12518
location: region:12405-12518:1
so has part: feature:12405-12518:1:exon
subclass of: SO_0000010

1466605
type: Gene
SIO_000068: ncbigene

position:12405:1
position: 12405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12518:1
position: 12518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12405-12518:1:exon

TogoCp11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp11
codon start: 1
transl table: 4
product: ribosomal protein L36
translation: MKIRSSLKYFCLNCKKKSYKKKQIIKCSNLKHNQRQK
SIO_010081: TogoCp11
subclass of: SO_0000673
so part of: TogoCp11
location: 12405..12518
location: region:12405-12518:1
so has part: feature:12405-12518:1:exon

NP_044555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12405-12518:1:exon

TogoCp12
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp12
so part of: sequence
location: 12522..12929
location: region:12522-12929:1
so has part: feature:12522-12929:1:exon
subclass of: SO_0000010

1466619
type: Gene
SIO_000068: ncbigene

position:12522:1
position: 12522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12929:1
position: 12929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12522-12929:1:exon

TogoCp12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp12
codon start: 1
transl table: 4
product: ribosomal protein S11
translation: MITNKIFTLYIKSTGKNTFLSLLQNNLIFNTNKLILDKKQNILNTYSCGNFGFKNRKKETAFACSFIVTKILLLIINLKIKFFHIVMKGIGLYRKIILTTILTFLNEHPDLKLLSITDLTQSSFNGCSSKKRKKH
SIO_010081: TogoCp12
subclass of: SO_0000673
so part of: TogoCp12
location: 12522..12929
location: region:12522-12929:1
so has part: feature:12522-12929:1:exon

NP_044556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12522-12929:1:exon

TogoCp13
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
gene: rps12
locus tag: TogoCp13
so part of: sequence
location: 12936..13301
location: region:12936-13301:1
so has part: feature:12936-13301:1:exon
subclass of: SO_0000010

1466606
type: Gene
SIO_000068: ncbigene

position:12936:1
position: 12936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13301:1
position: 13301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12936-13301:1:exon

TogoCp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
gene: rps12
locus tag: TogoCp13
codon start: 1
transl table: 4
product: ribosomal protein S12
translation: MLTNNQLLKHSRIKKKKQSYNFYTKPQIKGLCIKVFTRTPKKPNSALRKIAKIKLKNKKEILAYIPGEGHALQDHNFVLIKKGRVQDLPGIKYKVIRGVLDTIGVLNRKSSRSKYGTKKII
SIO_010081: TogoCp13
subclass of: SO_0000673
so part of: TogoCp13
location: 12936..13301
location: region:12936-13301:1
so has part: feature:12936-13301:1:exon

NP_044557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12936-13301:1:exon

TogoCp14
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp14
so part of: sequence
location: 13322..13732
location: region:13322-13732:1
so has part: feature:13322-13732:1:exon
subclass of: SO_0000010

1466607
type: Gene
SIO_000068: ncbigene

position:13322:1
position: 13322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13732:1
position: 13732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13322-13732:1:exon

TogoCp14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp14
note: in frame UGA codon predicted to encode tryptophan
codon start: 1
transl table: 4
product: ribosomal protein S7
translation: MIYFYQKQFTIFYLIQKLILSGKKRKTGNLVLNFLILFKRKNKDYLYNLEKIIIKLMVFFTFKMKKINTSIYQVPQPIIYKKSLFKAISWLVKAIKNKSKNKISTYKKLYLECDNILKQQGKALINRILIYLTYKK
SIO_010081: TogoCp14
subclass of: SO_0000673
so part of: TogoCp14
location: 13322..13732
location: region:13322-13732:1
so has part: feature:13322-13732:1:exon

NP_044558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13322-13732:1:exon

TogoCp15
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
gene: tufA
locus tag: TogoCp15
so part of: sequence
location: 13791..14996
location: region:13791-14996:1
so has part: feature:13791-14996:1:exon
subclass of: SO_0000010

1466608
type: Gene
SIO_000068: ncbigene

position:13791:1
position: 13791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14996:1
position: 14996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13791-14996:1:exon

TogoCp15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
gene: tufA
locus tag: TogoCp15
note: elongation factor 1-alpha
codon start: 1
transl table: 4
product: elongation factor Tu
translation: MAKEIFKKQKPHINIGTIGHVDHGKTTLTAAITYVLAKNNQAKLKTYKEIDCAPEEIARGITIKTSHIEYETAVRHYAHIDCPGHADYIKNMITGAAQMDGAILVVSAVDGPMPQTKEHLLLAKQIGISNIIVFLNKIDLIDDNEILELVELETRELLDKYNFSSDTPIITGSALKALDNNLTSNIWVDKIYELLTALDSYIPLPKRDLDKPFLLAIEDIFSITGRGTVVTGKIERGSIKLGDTVTMLGFNISKNVVVIGLEMFQKTLEIGEAGDNVGILLRGIQKTEVKRGMILSKPLTMTLHSIFQADVYILTVAEGGREKPIFEGYCPQFYLYTINITGSIKFSSETKETGTKMILPGDRVKLNVTLIYSIAMEKGMRFAIREGGRTIGAGIITDIIK
SIO_010081: TogoCp15
subclass of: SO_0000673
so part of: TogoCp15
location: 13791..14996
location: region:13791-14996:1
so has part: feature:13791-14996:1:exon

NP_044559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13791-14996:1:exon

TogoCp16
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp16
so part of: sequence
location: 15007..15138
location: region:15007-15138:1
so has part: feature:15007-15138:1:exon
subclass of: SO_0000010

1466609
type: Gene
SIO_000068: ncbigene

position:15007:1
position: 15007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15138:1
position: 15138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15007-15138:1:exon

TogoCp16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp16
note: similar to Plasmodium falciparum plastid genome ORF78; in frame UGA codon predicted to encode tryptophan
codon start: 1
transl table: 4
product: ORF B
translation: MNKKKVIINKLKKQKNFYLNLRYLYLKQLSNWNNKIFNFIKLK
SIO_010081: TogoCp16
subclass of: SO_0000673
so part of: TogoCp16
location: 15007..15138
location: region:15007-15138:1
so has part: feature:15007-15138:1:exon

NP_044560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15007-15138:1:exon

TogoCt50
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt50
so part of: sequence
location: complement(15151..15222)
location: region:15151-15222:-1
so has part: feature:15151-15222:-1:exon
subclass of: SO_0000663

1466578
type: Gene
SIO_000068: ncbigene

position:15151:-1
position: 15151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15222:-1
position: 15222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15151-15222:-1:exon

TogoCt50
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt50
product: tRNA-Phe
codon recognized: UUC
SIO_010081: TogoCt50
subclass of: SO_0000673
so part of: TogoCt50
location: complement(15151..15222)
location: region:15151-15222:-1
so has part: feature:15151-15222:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15151-15222:-1:exon

TogoCt51
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt51
so part of: sequence
location: 15241..15312
location: region:15241-15312:1
so has part: feature:15241-15312:1:exon
subclass of: SO_0000663

1466579
type: Gene
SIO_000068: ncbigene

position:15241:1
position: 15241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15312:1
position: 15312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15241-15312:1:exon

TogoCt51
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt51
product: tRNA-Gln
codon recognized: CAA
SIO_010081: TogoCt51
subclass of: SO_0000673
so part of: TogoCt51
location: 15241..15312
location: region:15241-15312:1
so has part: feature:15241-15312:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15241-15312:1:exon

TogoCt52
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt52
so part of: sequence
location: 15341..15411
location: region:15341-15411:1
so has part: feature:15341-15411:1:exon
subclass of: SO_0000663

1466580
type: Gene
SIO_000068: ncbigene

position:15341:1
position: 15341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15411:1
position: 15411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15341-15411:1:exon

TogoCt52
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt52
product: tRNA-Trp
codon recognized: UGG
SIO_010081: TogoCt52
subclass of: SO_0000673
so part of: TogoCt52
location: 15341..15411
location: region:15341-15411:1
so has part: feature:15341-15411:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15341-15411:1:exon

TogoCp17
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
gene: rpl11
locus tag: TogoCp17
so part of: sequence
location: 15451..15846
location: region:15451-15846:1
so has part: feature:15451-15846:1:exon
subclass of: SO_0000010

1466610
type: Gene
SIO_000068: ncbigene

position:15451:1
position: 15451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15846:1
position: 15846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15451-15846:1:exon

TogoCp17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
gene: rpl11
locus tag: TogoCp17
note: 50S ribosomal protein L11
codon start: 1
transl table: 4
product: ribosomal protein L11
translation: MVKFKLKIIKLILHTELTNFLSSLSSILGPIGININLFFQEYNKRIKLKNNIDLPLHIIVYNDKSYVLNFNLIYTSFFFITKLQKVFKKKQNKQYLIKKFSFLKQIKLFPKSNISICKTIKATLNSFYNIN
SIO_010081: TogoCp17
subclass of: SO_0000673
so part of: TogoCp17
location: 15451..15846
location: region:15451-15846:1
so has part: feature:15451-15846:1:exon

NP_044561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15451-15846:1:exon

TogoCp18
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp18
so part of: sequence
location: 15855..16031
location: region:15855-16031:1
so has part: feature:15855-16031:1:exon
subclass of: SO_0000010

1466611
type: Gene
SIO_000068: ncbigene

position:15855:1
position: 15855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16031:1
position: 16031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15855-16031:1:exon

TogoCp18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp18
note: similar to Plasmodium falciparum plastid genome ORF51
codon start: 1
transl table: 4
product: ORF F
translation: MICLNLSKFKVILKKYFVKKSGTKQINFIYKKYIKKIFMKYYYFGFLSYKAINYIVLF
SIO_010081: TogoCp18
subclass of: SO_0000673
so part of: TogoCp18
location: 15855..16031
location: region:15855-16031:1
so has part: feature:15855-16031:1:exon

NP_044562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15855-16031:1:exon

TogoCp19
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp19
so part of: sequence
location: 16035..16352
location: region:16035-16352:1
so has part: feature:16035-16352:1:exon
subclass of: SO_0000010

1466620
type: Gene
SIO_000068: ncbigene

position:16035:1
position: 16035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16352:1
position: 16352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16035-16352:1:exon

TogoCp19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp19
note: similar to Plasmodium falciparum plastid genome ORF101
codon start: 1
transl table: 4
product: ORF E
translation: MFFKKYIYLTKLFFILNRLSKKKLYFTHNFFKKNYSKYFFKQIFNNYFIFYFFSFNFSKIQLQTNFGICIKKKFKNNLLNLNFIRFKKKNYIFYNFYINFLHFNL
SIO_010081: TogoCp19
subclass of: SO_0000673
so part of: TogoCp19
location: 16035..16352
location: region:16035-16352:1
so has part: feature:16035-16352:1:exon

NP_044563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16035-16352:1:exon

TogoCp20
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
gene: clpC
locus tag: TogoCp20
so part of: sequence
location: 16395..18692
location: region:16395-18692:1
so has part: feature:16395-18692:1:exon
subclass of: SO_0000010

1466612
type: Gene
SIO_000068: ncbigene

position:16395:1
position: 16395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18692:1
position: 18692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16395-18692:1:exon

TogoCp20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
gene: clpC
locus tag: TogoCp20
note: in frame UGA codon predicted to encode tryptophan
codon start: 1
transl table: 4
product: Clp protease ATP binding subunit
translation: MNLNLFTSISSLKSTKEVLIILIYSKILASLFKNNSITFFHIICSLILQSNLFKLIIGKKNLLKFLQLYIKNNFKQTQLNYNILFSYTLFKFFNNLNKSFINTWKLTINLLQYNSILFKYILIYLFKVKSNTYNLINSIIFKFNDKPINNLYFNNLIKPFNYKSNFYNIINRKSDCVYLYEILNRKIIRNPILLGDFGIGKNSIIKKFSFFIEKFKLKFNNITKNLWILNIVTLLKYIKTNNLYIKKFFKFLQENKNIILICPKIEILFNTYYTDSNIYQNLESYSFLFKFFNYIKQNKLQLIGLSNNITDIEKKFNINQELNFLFEKIYVKELSNKEIFKILLKKSSLFEKYYNCSISFKIIKHILYYSQTYIKQHKTLLKSIWLLDNTCSKIYVNQKFHLLKNNNKLALSDIQKTLTKLINLSTNLLFNKANKTNFDIIALRKNLQKSLFGQPTAISKILISLKRVFTGLKQINKPIGSWLLCGPSGTGKTELAKLLAKFLFGSEADLIRFDMSEFMEKHSLSKLIGAPPGYVGYGKSGLLTEAIAKKPFTVLLFDEIEKAHKDINNLMLQLLDDGKLTDSLGKCVDFSNTLIFFTSNLGFPTNSYELQFLKSGTKLSKKNYKILSNKVESAIQSYFKPEFLNRLDDIIIFKPLNINFFKYIINKFLKNIYLKLYNNQIPIFLDIDSNIKTLLAKLAYHPLYGARPLKRLLELIIEKPISDLLINFSFNRIIIFSIFLNKKTFNINYSFKILIINVHFLFLQI
SIO_010081: TogoCp20
subclass of: SO_0000673
so part of: TogoCp20
location: 16395..18692
location: region:16395-18692:1
so has part: feature:16395-18692:1:exon

NP_044564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16395-18692:1:exon

TogoCt53
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt53
so part of: sequence
location: 18683..18755
location: region:18683-18755:1
so has part: feature:18683-18755:1:exon
subclass of: SO_0000663

1466581
type: Gene
SIO_000068: ncbigene

position:18683:1
position: 18683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18755:1
position: 18755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18683-18755:1:exon

TogoCt53
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt53
product: tRNA-Gly
codon recognized: GGA
SIO_010081: TogoCt53
subclass of: SO_0000673
so part of: TogoCt53
location: 18683..18755
location: region:18683-18755:1
so has part: feature:18683-18755:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18683-18755:1:exon

TogoCp21
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp21
so part of: sequence
location: 18806..19015
location: region:18806-19015:1
so has part: feature:18806-19015:1:exon
subclass of: SO_0000010

1466613
type: Gene
SIO_000068: ncbigene

position:18806:1
position: 18806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19015:1
position: 19015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18806-19015:1:exon

TogoCp21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp21
note: similar to Plasmodium falciparum plastid genome ORF79
codon start: 1
transl table: 4
product: ORF C
translation: MLKRIKFCYKKTILKSFLQKKIGFYIIKKKIYIFNFKQLLQNIKIGNSFTKKFLYRLFYCLKKIYSKYI
SIO_010081: TogoCp21
subclass of: SO_0000673
so part of: TogoCp21
location: 18806..19015
location: region:18806-19015:1
so has part: feature:18806-19015:1:exon

NP_044565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18806-19015:1:exon

TogoCt54
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt54
so part of: sequence
location: 19023..19106
location: region:19023-19106:1
so has part: feature:19023-19106:1:exon
subclass of: SO_0000663

1466582
type: Gene
SIO_000068: ncbigene

position:19023:1
position: 19023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19106:1
position: 19106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19023-19106:1:exon

TogoCt54
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt54
product: tRNA-Ser
codon recognized: UCA
SIO_010081: TogoCt54
subclass of: SO_0000673
so part of: TogoCt54
location: 19023..19106
location: region:19023-19106:1
so has part: feature:19023-19106:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19023-19106:1:exon

TogoCp22
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp22
so part of: sequence
location: 19158..19382
location: region:19158-19382:1
so has part: feature:19158-19382:1:exon
subclass of: SO_0000010

1466618
type: Gene
SIO_000068: ncbigene

position:19158:1
position: 19158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19382:1
position: 19382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19158-19382:1:exon

TogoCp22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp22
note: in frame UGA codon predicted to encode tryptophan; similar to Plasmodium falciparum plastid genome ORF105
codon start: 1
transl table: 4
product: ORF D
translation: MTTILYKNKNYIAQQILQTLKKCYINKKRKIKYNKYNYINIKLTYIYSQILFFLISSFIFFWILKQFYLIRFIY
SIO_010081: TogoCp22
subclass of: SO_0000673
so part of: TogoCp22
location: 19158..19382
location: region:19158-19382:1
so has part: feature:19158-19382:1:exon

NP_044566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19158-19382:1:exon

TogoCp23
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp23
so part of: sequence
location: complement(19372..20073)
location: region:19372-20073:-1
so has part: feature:19372-20073:-1:exon
subclass of: SO_0000010

1466614
type: Gene
SIO_000068: ncbigene

position:19372:-1
position: 19372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20073:-1
position: 20073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19372-20073:-1:exon

TogoCp23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp23
note: in frame UGA codons predicted to encode tryptophan
codon start: 1
transl table: 4
product: ribosomal protein S2
translation: MILLKLNSLINIPIYIGSATSYRQKKFINYIYKKYNNKHFFNIFIILKYLSKAYLYLYILSKYNRSLLFLNSSIKNFNLIKSLANLTNNFYINFFYKIDFLFNWIMFKNKLILLKWLKQLYTFYLKYLFNYLPYNLLIKLYYIYINILKKFGGLEYMQKLPKNIFICNSYSNYLYKNLNLKNFLIISIVDINNENTLKNISVRIIGNNKSYLAIKFIFNILLTALLHGSLFNK
SIO_010081: TogoCp23
subclass of: SO_0000673
so part of: TogoCp23
location: complement(19372..20073)
location: region:19372-20073:-1
so has part: feature:19372-20073:-1:exon

NP_044567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19372-20073:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 383379
note: similar to rpoC2; contains two in frame stop codons; six in frame UGA codons are predicted to encode tryptophan
so part of: sequence
location: complement(20103..23381)
location: region:20103-23381:-1
so has part: feature:20103-23381:-1:region

position:20103:-1
position: 20103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23381:-1
position: 23381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20103-23381:-1:region

TogoCp24
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp24
so part of: sequence
location: complement(23386..25083)
location: region:23386-25083:-1
so has part: feature:23386-25083:-1:exon
subclass of: SO_0000010

1466617
type: Gene
SIO_000068: ncbigene

position:23386:-1
position: 23386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25083:-1
position: 25083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23386-25083:-1:exon

TogoCp24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp24
note: in frame UGA codons predicted to encode tryptophan
codon start: 1
transl table: 4
product: RNA polymerase beta' chain
translation: MKKIFIKNNTIGFRLSLASPNLIIKWSLKYIKNFFILGEVIEPFTINFKTGYPEPNGLFCERIFGPLLSWKCRCGINFINYTNINTFCNFCGVEININQSRRWRMGFINLATPIAHKWYVKDILSLLLHIPINELKILLYYKIFSLFSYKKNQKQYNFNWIFSKLLFISEWFKQILKEYNLLNELVFCKEMYYELYFSNNNIKKKLLKKLSILHLFLLNNINPEWLFLTVLPVIPAGLRPLVKIKQKLFVSSLINNLYKIIILRNNRLKRWKILRHSIPFFFELIDKQLLQCSIDDLLNIKTKPSSSNCFTLQGKKGKFRQYILGKRIDFSGRSVILPGSDLIYKNIGLPLNLSLDLFKPMLLNFLKKDLSIITLLRASYITQYNPILLKRILKFLITKEIVLLNRAPTLHRMNIQAFKPYLIEFEGIKLYPVGCSSFNADFDGDQMGLFLILSKIAKQEAKKLMAFDKNIFSPTYLRNMFKLSQSIILGISTLLNLNGMVLYNNTIFANLYDVISSFFFNLIKLDSPIWIRCLEKNYNINIIFKKYILSTLGRILLQYYLYLFN
SIO_010081: TogoCp24
subclass of: SO_0000673
so part of: TogoCp24
location: complement(23386..25083)
location: region:23386-25083:-1
so has part: feature:23386-25083:-1:exon

NP_044568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23386-25083:-1:exon

TogoCp25
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCp25
so part of: sequence
location: complement(25103..28258)
location: region:25103-28258:-1
so has part: feature:25103-28258:-1:exon
subclass of: SO_0000010

1466615
type: Gene
SIO_000068: ncbigene

position:25103:-1
position: 25103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28258:-1
position: 28258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25103-28258:-1:exon

TogoCp25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
locus tag: TogoCp25
note: in frame UGA codons predicted to encode tryptophan
codon start: 1
transl table: 4
product: RNA polymerase beta chain
translation: MNFKIKTFFSIKSNKIFYTDFYFFLKKKLIILIKNIFPEYFNFNNKYKNWNLICLYDLLYFKVNNINFLDNVQYINSLIKIFLPLKFQNLKTNKVFFKNLLIFELPKYNSYNYCYLNGLKKIFISKYFTSNGIFFNKYLKRKYNIYYAKLLLTNSNFFNIILDLKLKQIYLSIKNLKFNFILFLYYLGIKNTDILKYSRYKNSKILKLLIFSALQTDLVNNKKIILKNLNYLKSIFKLTILNKNYKNFIISKDKLNYNYGDFSKNNLLIIDFIFILDLLLDLQSKKLCFKTIDHLDNKHINTIGNYFQHNFKFYLKKFISIIPNLIKLQKFSLLKVYNFKELLILNPLIQYLEQINSFSELMHKYKLNNYNSFSKGILNLREICLNQLGKLCLIDTTEGINCGLVVSFAKHIRIYKKGIIQVYFSSIFKNKTKEFLNFKTSLDQELYLIQFNNINLRKIKYLMNVRLVYNKNNFRIKFFSNKKSILLEFTDLFSFTENLIPFIKYNDPARCLMGAKMQSQSVPLLNKKKSFVITGYEKEIITKSDTTIKALQEGIVLNASSLKIHIKDLFNREIVYYLSKYKKSNQNTIIHQKPLVWNGERVFTNQLLTQHQDIIDSEFAIGNNLLFYYGNFCGYDFEDAVIVSKRVLYQQLFSSLHMDIYEFNFCYNNENDIEFSTLEIPKQSYYIKKNLDSLGIIKEGEKILTGSILLTKIKVAKPTYTYKSIFKLIYSIFGKTIRNIKDNSLYIQTGKSGRVSKIELFLVNISSRHKYKTYNNSYLKCRIFICKQRFLTVGDKLCGRYGNKGILSYIAENADLPFLQNSFYPDIIVGALGIPSRMNLGQLFEALVGKISFSYNIRILPSFTTSSNLYFNYLKILIYNFLMFNNFKKGFNWLYNFNLPGKFIIRDGRTGVKLKSSVLCGVSRYSKLIHLIKDKLHFRTTGPYTEILQQPLKGKKNLGGQRFGEMEIWALEAFGASYNLKEILNYKSDDCFARNNLKEYLLFRNTELQNSTITESFRVILKEFNGLILNLELFLITDDLEENYLNLTINY
SIO_010081: TogoCp25
subclass of: SO_0000673
so part of: TogoCp25
location: complement(25103..28258)
location: region:25103-28258:-1
so has part: feature:25103-28258:-1:exon

NP_044569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25103-28258:-1:exon

TogoCp26
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
gene: ycf24
locus tag: TogoCp26
so part of: sequence
location: complement(28289..29686)
location: region:28289-29686:-1
so has part: feature:28289-29686:-1:exon
subclass of: SO_0000010

1466616
type: Gene
SIO_000068: ncbigene

position:28289:-1
position: 28289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29686:-1
position: 29686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28289-29686:-1:exon

TogoCp26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 383379
gene: ycf24
locus tag: TogoCp26
note: ycf24 homolog; in frame UGA codon predicted to encode tryptophan; similar to Plasmodium falciparum plastid genome ORF470
codon start: 1
transl table: 4
product: putative ABC transporter
translation: MKLYKYLYNKYNNNTDLFNTVRLIGGLNINMVNKLIFKQDNFIFLYIFRLNALSILNKFKQPDWCFYELPEFAFDDISYYSIPLNVYTNKNKYKSILSKLGLELKFSENLILDVIFDSVLLLNLTTFFLIKMGLFFLSFFQSIIFYPYLIFSYLGSIVSNTDNFFLTINSIIFNEGSFCFVMKDLNSNINLTTYFRTHSENFAQFERTLIVLSENSKLIYFEGCSAPMFLESQLHIAIVELFIKTKANLKYSTIQNWYRGNQLGEGGLYNFTTKRGFCMDKSFLNWIQIEIGSVITWKYPSTYLIGNKSFSNFFSLAMLSDYQVSDTGTKMLHIGKNTKSFILSKSLSFNFSFYTYRGLVTIFKTALNSYNYTECNSLLIGCNAFTATIPYTIINNFSAYINQEATISKLELDFLFFLLHRGLNLKSTLMILIYGYCYNICSKISFELELEVPLLIVARAQKLFY
SIO_010081: TogoCp26
subclass of: SO_0000673
so part of: TogoCp26
location: complement(28289..29686)
location: region:28289-29686:-1
so has part: feature:28289-29686:-1:exon

NP_044570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28289-29686:-1:exon

TogoCt55
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt55
so part of: sequence
location: complement(29728..29798)
location: region:29728-29798:-1
so has part: feature:29728-29798:-1:exon
subclass of: SO_0000663

1466583
type: Gene
SIO_000068: ncbigene

position:29728:-1
position: 29728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29798:-1
position: 29798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29728-29798:-1:exon

TogoCt55
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt55
product: tRNA-Thr
codon recognized: ACA
SIO_010081: TogoCt55
subclass of: SO_0000673
so part of: TogoCt55
location: complement(29728..29798)
location: region:29728-29798:-1
so has part: feature:29728-29798:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29728-29798:-1:exon

TogoCr29
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCr29
so part of: sequence
location: complement(29799..32485)
location: region:29799-32485:-1
so has part: feature:29799-32485:-1:exon
subclass of: SO_0000573

1466584
type: Gene
SIO_000068: ncbigene

position:29799:-1
position: 29799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32485:-1
position: 32485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29799-32485:-1:exon

TogoCr29
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 383379
locus tag: TogoCr29
product: large subunit ribosomal RNA
SIO_010081: TogoCr29
subclass of: SO_0000673
so part of: TogoCr29
location: complement(29799..32485)
location: region:29799-32485:-1
so has part: feature:29799-32485:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29799-32485:-1:exon

TogoCt56
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt56
so part of: sequence
location: complement(32544..32617)
location: region:32544-32617:-1
so has part: feature:32544-32617:-1:exon
subclass of: SO_0000663

1466585
type: Gene
SIO_000068: ncbigene

position:32544:-1
position: 32544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32617:-1
position: 32617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32544-32617:-1:exon

TogoCt56
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt56
product: tRNA-Met
codon recognized: AUG
SIO_010081: TogoCt56
subclass of: SO_0000673
so part of: TogoCt56
location: complement(32544..32617)
location: region:32544-32617:-1
so has part: feature:32544-32617:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32544-32617:-1:exon

TogoCt57
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt57
so part of: sequence
location: complement(32643..32715)
location: region:32643-32715:-1
so has part: feature:32643-32715:-1:exon
subclass of: SO_0000663

1466586
type: Gene
SIO_000068: ncbigene

position:32643:-1
position: 32643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32715:-1
position: 32715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32643-32715:-1:exon

TogoCt57
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt57
product: tRNA-Arg
codon recognized: CGU
SIO_010081: TogoCt57
subclass of: SO_0000673
so part of: TogoCt57
location: complement(32643..32715)
location: region:32643-32715:-1
so has part: feature:32643-32715:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32643-32715:-1:exon

TogoCt58
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt58
so part of: sequence
location: 32751..32822
location: region:32751-32822:1
so has part: feature:32751-32822:1:exon
subclass of: SO_0000663

1466587
type: Gene
SIO_000068: ncbigene

position:32751:1
position: 32751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32822:1
position: 32822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32751-32822:1:exon

TogoCt58
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt58
product: tRNA-Val
codon recognized: GUA
SIO_010081: TogoCt58
subclass of: SO_0000673
so part of: TogoCt58
location: 32751..32822
location: region:32751-32822:1
so has part: feature:32751-32822:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32751-32822:1:exon

TogoCt59
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt59
so part of: sequence
location: 32837..32909
location: region:32837-32909:1
so has part: feature:32837-32909:1:exon
subclass of: SO_0000663

1466594
type: Gene
SIO_000068: ncbigene

position:32837:1
position: 32837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32909:1
position: 32909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32837-32909:1:exon

TogoCt59
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt59
product: tRNA-Arg
codon recognized: AGA
SIO_010081: TogoCt59
subclass of: SO_0000673
so part of: TogoCt59
location: 32837..32909
location: region:32837-32909:1
so has part: feature:32837-32909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32837-32909:1:exon

TogoCt60
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt60
so part of: sequence
location: 32919..32994
location: region:32919-32994:1
so has part: feature:32919-32994:1:exon
subclass of: SO_0000663

1466588
type: Gene
SIO_000068: ncbigene

position:32919:1
position: 32919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32994:1
position: 32994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32919-32994:1:exon

TogoCt60
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt60
product: tRNA-Leu
codon recognized: CUA
SIO_010081: TogoCt60
subclass of: SO_0000673
so part of: TogoCt60
location: 32919..32994
location: region:32919-32994:1
so has part: feature:32919-32994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32919-32994:1:exon

TogoCt61
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt61
so part of: sequence
location: complement(33017..33089)
location: region:33017-33089:-1
so has part: feature:33017-33089:-1:exon
subclass of: SO_0000663

1466589
type: Gene
SIO_000068: ncbigene

position:33017:-1
position: 33017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33089:-1
position: 33089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33017-33089:-1:exon

TogoCt61
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt61
product: tRNA-Asn
codon recognized: AAC
SIO_010081: TogoCt61
subclass of: SO_0000673
so part of: TogoCt61
location: complement(33017..33089)
location: region:33017-33089:-1
so has part: feature:33017-33089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33017-33089:-1:exon

TogoCt62
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt62
so part of: sequence
location: 33130..33202
location: region:33130-33202:1
so has part: feature:33130-33202:1:exon
subclass of: SO_0000663

1466590
type: Gene
SIO_000068: ncbigene

position:33130:1
position: 33130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33202:1
position: 33202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33130-33202:1:exon

TogoCt62
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt62
product: tRNA-Ala
codon recognized: GCA
SIO_010081: TogoCt62
subclass of: SO_0000673
so part of: TogoCt62
location: 33130..33202
location: region:33130-33202:1
so has part: feature:33130-33202:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33130-33202:1:exon

TogoCr30
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCr30
so part of: sequence
location: 33252..34751
location: region:33252-34751:1
so has part: feature:33252-34751:1:exon
subclass of: SO_0000573

1466591
type: Gene
SIO_000068: ncbigene

position:33252:1
position: 33252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34751:1
position: 34751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33252-34751:1:exon

TogoCr30
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 383379
locus tag: TogoCr30
product: small subunit ribosomal RNA
SIO_010081: TogoCr30
subclass of: SO_0000673
so part of: TogoCr30
location: 33252..34751
location: region:33252-34751:1
so has part: feature:33252-34751:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33252-34751:1:exon

TogoCt63
type: Gene
subclass of: SO_0000704
RO_0002162: 383379
locus tag: TogoCt63
so part of: sequence
location: 34918..34989
location: region:34918-34989:1
so has part: feature:34918-34989:1:exon
subclass of: SO_0000663

1466592
type: Gene
SIO_000068: ncbigene

position:34918:1
position: 34918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34989:1
position: 34989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34918-34989:1:exon

TogoCt63
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 383379
locus tag: TogoCt63
product: tRNA-Ile
codon recognized: AUC
SIO_010081: TogoCt63
subclass of: SO_0000673
so part of: TogoCt63
location: 34918..34989
location: region:34918-34989:1
so has part: feature:34918-34989:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34918-34989:1:exon