Vulpes lagopus strain Blue_001 chromosome 24, ASM1834538v1, whole genome shotgun sequence.
type: Entry
definition: Vulpes lagopus strain Blue_001 chromosome 24, ASM1834538v1, whole genome shotgun sequence.
sequence version: NC_054847.1
sequence date: 2021-05-24
sequence: sequence
division: CON
label: NC_054847.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA730899
dblink: SAMN16815335
keyword: WGS
keyword: RefSeq
source: Vulpes lagopus (Arctic fox)
organism: Vulpes lagopus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes.
reference: 1
references: 33829635
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM031318.1.\nAssembly name: ASM1834538v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Hebei Normal University of\nScience and Technology on 2021/05/12. The original whole-genome\nshotgun project has the accession JADWOQ000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Hebei Normal University of Science and\n Technology\nAssembly Method :: WTDBG2 v. 2.5\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 121.0x\nSequencing Technology :: PacBio Sequel; Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Vulpes lagopus Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 58817156
topology: linear
so has quality: SO_0000987
location: 1..58817156
location: region:1-58817156:1
RO_0002162: 494514

NC_054847
type: RefSeq
SIO_000068: refseq

PRJNA730899
type: BioProject
SIO_000068: bioproject

SAMN16815335
type: BioSample
SIO_000068: biosample

1
title: Chromosome-level genome assembly of the Arctic fox (Vulpes lagopus) using PacBio sequencing and Hi-C technology
author: Peng, Y.
author: Li, H.
author: Liu, Z.
author: Zhang, C.
author: Li, K.
author: Gong, Y.
author: Geng, L.
author: Su, J.
author: Guan, X.
author: Liu, L.
author: Zhou, R.
author: Zhao, Z.
author: Guo, J.
author: Liang, Q.
author: Li, X.
journal: Mol Ecol Resour (2021) In press
pubmed: 33829635
comments: Publication Status: Available-Online prior to print

33829635
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58817156:1
position: 58817156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-58817156:1:source
so part of: sequence
organism: Vulpes lagopus
mol type: genomic DNA
strain: Blue_001
chromosome: 24
sex: female
tissue type: blood

494514
type: Taxonomy
SIO_000068: taxonomy

LOC121482089
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 56845..92664
location: region:56845-92664:1
so has part: feature:56845-92664:1:exon
subclass of: SO_0000010

121482089
type: Gene
SIO_000068: ncbigene

position:56845:1
position: 56845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92664:1
position: 92664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56845-92664:1:exon

LOC121482089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LOC121482089
product: cryptic protein-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739935.1
SIO_010081: LOC121482089
subclass of: SO_0000673
so part of: LOC121482089
location: join(56845..56950,83171..83314,83637..83689,83775..83924,84666..84780,84963..85072,92388..92664)
location: region:56845-92664:1
so has part: feature:56845-56950:1:exon
so has part: feature:83171-83314:1:exon
so has part: feature:83637-83689:1:exon
so has part: feature:83775-83924:1:exon
so has part: feature:84666-84780:1:exon
so has part: feature:84963-85072:1:exon
so has part: feature:92388-92664:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56845-56950:1:exon

position:56950:1
position: 56950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:83171-83314:1:exon

position:83171:1
position: 83171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83314:1
position: 83314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:83637-83689:1:exon

position:83637:1
position: 83637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83689:1
position: 83689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:83775-83924:1:exon

position:83775:1
position: 83775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83924:1
position: 83924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:84666-84780:1:exon

position:84666:1
position: 84666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84780:1
position: 84780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:84963-85072:1:exon

position:84963:1
position: 84963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85072:1
position: 85072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:92388-92664:1:exon

position:92388:1
position: 92388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121482089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LOC121482089
product: cryptic protein-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739936.1
SIO_010081: LOC121482089
subclass of: SO_0000673
so part of: LOC121482089
location: join(56845..56950,83171..83314,83637..83689,83775..83897,84666..84780,84963..85072,92388..92664)
location: region:56845-92664:1
so has part: feature:56845-56950:1:exon
so has part: feature:83171-83314:1:exon
so has part: feature:83637-83689:1:exon
so has part: feature:83775-83897:1:exon
so has part: feature:84666-84780:1:exon
so has part: feature:84963-85072:1:exon
so has part: feature:92388-92664:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56845-56950:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83171-83314:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:83637-83689:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83775-83897:1:exon

position:83897:1
position: 83897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:84666-84780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84963-85072:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:92388-92664:1:exon

LOC121482089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LOC121482089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cryptic protein-like isoform X1
translation: MTWSYPVRLLFFVSLALWNIHLGNNSNREEINNATTQKLQQKTLNWTLNNLGEVNGNGDGWRPQDTGPYFHAFQDRASSPPRCCRNGGTCVLGSFCVCPDPFTGRYCEHDQRHSGCGALMHGAWTVRGCRLCRCVFAALHCLPRQTPGSCDLEDFLAARSDGLSAQLSSQRMLSVLFLLPCLLLQTILSEGGDC
SIO_010081: LOC121482089
subclass of: SO_0000673
so part of: LOC121482089
location: join(83292..83314,83637..83689,83775..83924,84666..84780,84963..85072,92388..92521)
location: region:83292-92521:1
so has part: feature:83292-83314:1:exon
so has part: feature:83637-83689:1:exon
so has part: feature:83775-83924:1:exon
so has part: feature:84666-84780:1:exon
so has part: feature:84963-85072:1:exon
so has part: feature:92388-92521:1:exon

XP_041595869.1
type: Protein
SIO_000068: ncbiprotein

position:83292:1
position: 83292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92521:1
position: 92521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83292-83314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83637-83689:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:83775-83924:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84666-84780:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:84963-85072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92388-92521:1:exon

LOC121482089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LOC121482089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cryptic protein-like isoform X2
translation: MTWSYPVRLLFFVSLALWNIHLGNNSNREEINNATTQKLQQKTLNWTLNNLGEVNGNGDGWRPQDTGASSPPRCCRNGGTCVLGSFCVCPDPFTGRYCEHDQRHSGCGALMHGAWTVRGCRLCRCVFAALHCLPRQTPGSCDLEDFLAARSDGLSAQLSSQRMLSVLFLLPCLLLQTILSEGGDC
SIO_010081: LOC121482089
subclass of: SO_0000673
so part of: LOC121482089
location: join(83292..83314,83637..83689,83775..83897,84666..84780,84963..85072,92388..92521)
location: region:83292-92521:1
so has part: feature:83292-83314:1:exon
so has part: feature:83637-83689:1:exon
so has part: feature:83775-83897:1:exon
so has part: feature:84666-84780:1:exon
so has part: feature:84963-85072:1:exon
so has part: feature:92388-92521:1:exon

XP_041595870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83292-83314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83637-83689:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:83775-83897:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84666-84780:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:84963-85072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92388-92521:1:exon

GPR148
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: GPR148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 133462..141108
location: region:133462-141108:1
so has part: feature:133462-141108:1:exon
subclass of: SO_0000010

121482098
type: Gene
SIO_000068: ncbigene

position:133462:1
position: 133462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141108:1
position: 141108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133462-141108:1:exon

GPR148
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: GPR148
product: G protein-coupled receptor 148
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_041739946.1
SIO_010081: GPR148
subclass of: SO_0000673
so part of: GPR148
location: join(133462..133516,133856..134050,140031..141108)
location: region:133462-141108:1
so has part: feature:133462-133516:1:exon
so has part: feature:133856-134050:1:exon
so has part: feature:140031-141108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133462-133516:1:exon

position:133516:1
position: 133516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133856-134050:1:exon

position:133856:1
position: 133856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134050:1
position: 134050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:140031-141108:1:exon

position:140031:1
position: 140031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPR148
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: GPR148
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; substituted 3 bases at 3 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:140202..140204,aa:OTHER)
transl except: (pos:140632..140634,aa:OTHER)
transl except: (pos:140806..140808,aa:OTHER)
product: LOW QUALITY PROTEIN: probable G-protein coupled receptor 148
translation: MSSGRALDKLWASAEEQHYLGPKILAFIFRYTGSLVATLSTIPSSVYPYPSNLPTICTIPDPLMAPPIFSPTKWKLTASGNPLRSIGDQLTPFPLDTTAWPASDQLISEPSCMPQVSNNTSLSLGDLKVAVSLLHWLFFPXNMLAVAILTWSPLLLVTILQRRRLWQESHYLLPANILLSDLAYLVFHMLISPSNLGSWSLGLIACGILTDAIFTAYISTILXFMATVLHTYLAVAYPLCYFSFMSCEAAQKVVALTWLVACFFSDXLIWLSKQQNARLEEQGAXCILQLIMGTESGCGPLVTVTHTCILCILFLCTPLNTYCFWRIYAETRTSGIWVQGCSXARGILLIHTVLIMLYVSSVVVFSLDIMLIKYHHTDARTHVWLMAAKSEVFMMPPCAQLPYLYTLRYWKLLEMVRGHFSSKRHSDIFTISQSYSLHSLAS
SIO_010081: GPR148
subclass of: SO_0000673
so part of: GPR148
location: join(133462..133516,133856..134050,140031..141108)
location: region:133462-141108:1
so has part: feature:133462-133516:1:exon
so has part: feature:133856-134050:1:exon
so has part: feature:140031-141108:1:exon

XP_041595880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133462-133516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133856-134050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140031-141108:1:exon

LOC121482203
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482203
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 153335..153438
location: region:153335-153438:1
so has part: feature:153335-153438:1:exon
subclass of: SO_0000623

121482203
type: Gene
SIO_000068: ncbigene

position:153335:1
position: 153335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153438:1
position: 153438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153335-153438:1:exon

LOC121482203
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: snRNA
gene: LOC121482203
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005985557.1
SIO_010081: LOC121482203
subclass of: SO_0000673
so part of: LOC121482203
location: 153335..153438
location: region:153335-153438:1
so has part: feature:153335-153438:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153335-153438:1:exon

AMER3
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: AMER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 155315..166801
location: region:155315-166801:1
so has part: feature:155315-166801:1:exon
subclass of: SO_0000010

121481828
type: Gene
SIO_000068: ncbigene

position:155315:1
position: 155315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166801:1
position: 166801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155315-166801:1:exon

AMER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: AMER3
product: APC membrane recruitment protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041739371.1
SIO_010081: AMER3
subclass of: SO_0000673
so part of: AMER3
location: join(155315..155425,160925..166801)
location: region:155315-166801:1
so has part: feature:155315-155425:1:exon
so has part: feature:160925-166801:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155315-155425:1:exon

position:155425:1
position: 155425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:160925-166801:1:exon

position:160925:1
position: 160925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AMER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: AMER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: APC membrane recruitment protein 3
translation: MELKRGKTFIKSSLQISHEKPSDPAATALTMEDAGPRSVSPGGQQQPQSERAPQVSPSTQGYDRYPSKGAEPEPEVGAAAFCGATFKLVRKSKTHESVPGAGRASTATGQLVGSTSFPGPSSSQRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRPKKCFRNLFHIRRNKTENLASLVTKGESLSSSRGPSENGGQPGKAFFPLGEGLGPDSLCQDLSDSELLLPDSSFDLCRALCEDVASLKSFDSLTGCGEIFADESSVPSLELNEGLESPAQVSQALENKVLRGPFQGSVEQLASPAQNEMSDFAKFWDSVNHSVRQQHHALLGPWLGTDTDRPRLDAAGLAELPLCPCRDPYSGSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEALSPGTRSAVFPRDSYSGDALYELFYDPSEGPVGPSLDDDLCVSESLSGPALGAPLSMCSFHVGAEENLAPAPGPDVLSQGFLQSSWKGKECLLKLCDTELAITMGIINWLRRGPELRNPPASAPGETATSPRGQAEKLGAGSEKKDSDPGKQESRGVGASDANRTTVGLAPSRRELWAHSGTKGPLARESKGLAGPKQGTSSLSRDPSLECVQVSGEGGTQGCHESLFSVGSAASAATDTNRKNKLPNPWPGFQESRPPGNLECFQGPWRSGPGGSTFNVEPSLTGCVAQVAALQIHSDCQSPTTQPPRQDTSSGLCRQPQARSPEILQQKQPNSFPNMSVVCGLPSLASPLHSPQDQRCLGHILDLSRLRVEPTRMDTQAHRASTEDQPPQLSSRAVNQVAHRNQLGS
SIO_010081: AMER3
subclass of: SO_0000673
so part of: AMER3
location: 160945..163371
location: region:160945-163371:1
so has part: feature:160945-163371:1:exon

XP_041595305.1
type: Protein
SIO_000068: ncbiprotein

position:160945:1
position: 160945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163371:1
position: 163371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160945-163371:1:exon

LOC121482209
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482209
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 264422..264518
location: region:264422-264518:1
so has part: feature:264422-264518:1:exon

121482209
type: Gene
SIO_000068: ncbigene

position:264422:1
position: 264422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264518:1
position: 264518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264422-264518:1:exon

LOC121482209
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482209
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC121482209
subclass of: SO_0000673
so part of: LOC121482209
location: 264422..264518
location: region:264422-264518:1
so has part: feature:264422-264518:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264422-264518:1:exon

LOC121482100
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 277796..309301
location: region:277796-309301:1
so has part: feature:277796-309301:1:exon

121482100
type: Gene
SIO_000068: ncbigene

position:277796:1
position: 277796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309301:1
position: 309301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277796-309301:1:exon

LOC121482100
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482100
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC121482100
subclass of: SO_0000673
so part of: LOC121482100
location: 277796..277883
location: region:277796-277883:1
so has part: feature:277796-277883:1:exon

position:277883:1
position: 277883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277796-277883:1:exon

LOC121482100
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482100
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC121482100
subclass of: SO_0000673
so part of: LOC121482100
location: 308948..309301
location: region:308948-309301:1
so has part: feature:308948-309301:1:exon

position:308948:1
position: 308948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308948-309301:1:exon

ARHGEF4
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: ARHGEF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 383417..473474
location: region:383417-473474:1
so has part: feature:383417-473474:1:exon
subclass of: SO_0000010

121481836
type: Gene
SIO_000068: ncbigene

position:383417:1
position: 383417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473474:1
position: 473474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383417-473474:1:exon

ARHGEF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ARHGEF4
product: Rho guanine nucleotide exchange factor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739378.1
SIO_010081: ARHGEF4
subclass of: SO_0000673
so part of: ARHGEF4
location: join(383417..383533,450505..450644,463080..463259,464161..464337,465758..465937,467710..467942,468189..468318,469732..469863,470623..470866,471645..471722,472282..473474)
location: region:383417-473474:1
so has part: feature:383417-383533:1:exon
so has part: feature:450505-450644:1:exon
so has part: feature:463080-463259:1:exon
so has part: feature:464161-464337:1:exon
so has part: feature:465758-465937:1:exon
so has part: feature:467710-467942:1:exon
so has part: feature:468189-468318:1:exon
so has part: feature:469732-469863:1:exon
so has part: feature:470623-470866:1:exon
so has part: feature:471645-471722:1:exon
so has part: feature:472282-473474:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:383417-383533:1:exon

position:383533:1
position: 383533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:450505-450644:1:exon

position:450505:1
position: 450505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450644:1
position: 450644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:463080-463259:1:exon

position:463080:1
position: 463080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463259:1
position: 463259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:464161-464337:1:exon

position:464161:1
position: 464161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464337:1
position: 464337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:465758-465937:1:exon

position:465758:1
position: 465758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465937:1
position: 465937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:467710-467942:1:exon

position:467710:1
position: 467710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467942:1
position: 467942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:468189-468318:1:exon

position:468189:1
position: 468189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468318:1
position: 468318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:469732-469863:1:exon

position:469732:1
position: 469732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469863:1
position: 469863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:470623-470866:1:exon

position:470623:1
position: 470623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470866:1
position: 470866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:471645-471722:1:exon

position:471645:1
position: 471645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471722:1
position: 471722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:472282-473474:1:exon

position:472282:1
position: 472282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGEF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ARHGEF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 4 isoform X1
translation: MHSSSHHYSHPGGGGEQLAINELISDGSAVCAEALWDHVTMDDQELGFKAGDVIEVMDATNREWWWGRVADGEGWFPASFVRLRVNQDEPADDAAVRAGDRGAEDTGAEAQSSRDQMRTNVINEILSTERDYIKHLRDICEGYIRQCRRRADMFSEEQLRTIFGNIEDIYRCQKAFARALEQRFNRERPHLSELGACFLEHQADFQIYSEYCNNHPNACVELSRLGKLSKYVYFFEACRLLQKMIDISLDGFLLTPVQKICKYPLQLAELLKYTPPQHRDFKDVEAALHAMKNVAQLINERKRRLENIDKIAQWQSSIEDWEGEDLLVRSSELIYSGELTRVTQPQAKSQQRMFFLFDHQLIYCKKDLLRRDVLYYKGRVDMDGLEVVDLEDGKDRDLHVSVKNAFRLLCGATGESHLLCARKPEQKQRWLKAFAREREQVQLDQETGFSITELQRKQAMLNASKQQAAGKPKALSRPYYLTRQKHPALPTSLPQQQVLVLAEPKRKPSTFWHSISRLAPFRK
SIO_010081: ARHGEF4
subclass of: SO_0000673
so part of: ARHGEF4
location: join(450579..450644,463080..463259,464161..464337,465758..465937,467710..467942,468189..468318,469732..469863,470623..470866,471645..471722,472282..472433)
location: region:450579-472433:1
so has part: feature:450579-450644:1:exon
so has part: feature:463080-463259:1:exon
so has part: feature:464161-464337:1:exon
so has part: feature:465758-465937:1:exon
so has part: feature:467710-467942:1:exon
so has part: feature:468189-468318:1:exon
so has part: feature:469732-469863:1:exon
so has part: feature:470623-470866:1:exon
so has part: feature:471645-471722:1:exon
so has part: feature:472282-472433:1:exon

XP_041595312.1
type: Protein
SIO_000068: ncbiprotein

position:450579:1
position: 450579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472433:1
position: 472433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450579-450644:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463080-463259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464161-464337:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:465758-465937:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:467710-467942:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:468189-468318:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469732-469863:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:470623-470866:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471645-471722:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:472282-472433:1:exon

ARHGEF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ARHGEF4
product: Rho guanine nucleotide exchange factor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041739379.1
SIO_010081: ARHGEF4
subclass of: SO_0000673
so part of: ARHGEF4
location: join(458600..458807,463080..463259,464161..464337,465758..465937,467710..467942,468189..468318,469732..469863,470623..470866,471645..471722,472282..473474)
location: region:458600-473474:1
so has part: feature:458600-458807:1:exon
so has part: feature:463080-463259:1:exon
so has part: feature:464161-464337:1:exon
so has part: feature:465758-465937:1:exon
so has part: feature:467710-467942:1:exon
so has part: feature:468189-468318:1:exon
so has part: feature:469732-469863:1:exon
so has part: feature:470623-470866:1:exon
so has part: feature:471645-471722:1:exon
so has part: feature:472282-473474:1:exon

position:458600:1
position: 458600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458600-458807:1:exon

position:458807:1
position: 458807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:463080-463259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464161-464337:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:465758-465937:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:467710-467942:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:468189-468318:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469732-469863:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:470623-470866:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471645-471722:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:472282-473474:1:exon

ARHGEF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ARHGEF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 4 isoform X2
translation: MDDQELGFKAGDVIEVMDATNREWWWGRVADGEGWFPASFVRLRVNQDEPADDAAVRAGDRGAEDTGAEAQSSRDQMRTNVINEILSTERDYIKHLRDICEGYIRQCRRRADMFSEEQLRTIFGNIEDIYRCQKAFARALEQRFNRERPHLSELGACFLEHQADFQIYSEYCNNHPNACVELSRLGKLSKYVYFFEACRLLQKMIDISLDGFLLTPVQKICKYPLQLAELLKYTPPQHRDFKDVEAALHAMKNVAQLINERKRRLENIDKIAQWQSSIEDWEGEDLLVRSSELIYSGELTRVTQPQAKSQQRMFFLFDHQLIYCKKDLLRRDVLYYKGRVDMDGLEVVDLEDGKDRDLHVSVKNAFRLLCGATGESHLLCARKPEQKQRWLKAFAREREQVQLDQETGFSITELQRKQAMLNASKQQAAGKPKALSRPYYLTRQKHPALPTSLPQQQVLVLAEPKRKPSTFWHSISRLAPFRK
SIO_010081: ARHGEF4
subclass of: SO_0000673
so part of: ARHGEF4
location: join(463134..463259,464161..464337,465758..465937,467710..467942,468189..468318,469732..469863,470623..470866,471645..471722,472282..472433)
location: region:463134-472433:1
so has part: feature:463134-463259:1:exon
so has part: feature:464161-464337:1:exon
so has part: feature:465758-465937:1:exon
so has part: feature:467710-467942:1:exon
so has part: feature:468189-468318:1:exon
so has part: feature:469732-469863:1:exon
so has part: feature:470623-470866:1:exon
so has part: feature:471645-471722:1:exon
so has part: feature:472282-472433:1:exon

XP_041595313.1
type: Protein
SIO_000068: ncbiprotein

position:463134:1
position: 463134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463134-463259:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464161-464337:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465758-465937:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467710-467942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:468189-468318:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:469732-469863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:470623-470866:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:471645-471722:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:472282-472433:1:exon

FAM168B
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: FAM168B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(474166..518443)
location: region:474166-518443:-1
so has part: feature:474166-518443:-1:exon
subclass of: SO_0000010

121481837
type: Gene
SIO_000068: ncbigene

position:474166:-1
position: 474166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518443:-1
position: 518443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474166-518443:-1:exon

FAM168B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: FAM168B
product: family with sequence similarity 168 member B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739380.1
SIO_010081: FAM168B
subclass of: SO_0000673
so part of: FAM168B
location: complement(join(474166..478654,479105..479230,480920..481097,481234..481376,496226..496309,509582..509661,518311..518443))
location: region:474166-518443:-1
so has part: feature:518311-518443:-1:exon
so has part: feature:509582-509661:-1:exon
so has part: feature:496226-496309:-1:exon
so has part: feature:481234-481376:-1:exon
so has part: feature:480920-481097:-1:exon
so has part: feature:479105-479230:-1:exon
so has part: feature:474166-478654:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:518311-518443:-1:exon

position:518311:-1
position: 518311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:509582-509661:-1:exon

position:509582:-1
position: 509582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509661:-1
position: 509661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:496226-496309:-1:exon

position:496226:-1
position: 496226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496309:-1
position: 496309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:481234-481376:-1:exon

position:481234:-1
position: 481234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481376:-1
position: 481376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:480920-481097:-1:exon

position:480920:-1
position: 480920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481097:-1
position: 481097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:479105-479230:-1:exon

position:479105:-1
position: 479105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479230:-1
position: 479230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:474166-478654:-1:exon

position:478654:-1
position: 478654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM168B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: FAM168B
product: family with sequence similarity 168 member B, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041739385.1
SIO_010081: FAM168B
subclass of: SO_0000673
so part of: FAM168B
location: complement(join(474166..478654,479105..479230,480920..481097,481234..481376,496226..496309,509582..509661,518187..518208))
location: region:474166-518208:-1
so has part: feature:518187-518208:-1:exon
so has part: feature:509582-509661:-1:exon
so has part: feature:496226-496309:-1:exon
so has part: feature:481234-481376:-1:exon
so has part: feature:480920-481097:-1:exon
so has part: feature:479105-479230:-1:exon
so has part: feature:474166-478654:-1:exon

position:518208:-1
position: 518208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518187-518208:-1:exon

position:518187:-1
position: 518187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:509582-509661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496226-496309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:481234-481376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480920-481097:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479105-479230:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474166-478654:-1:exon

FAM168B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: FAM168B
product: family with sequence similarity 168 member B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739381.1
SIO_010081: FAM168B
subclass of: SO_0000673
so part of: FAM168B
location: complement(join(474166..478654,479105..479230,480920..481097,481234..481376,496226..496309,509582..509661,517638..518070))
location: region:474166-518070:-1
so has part: feature:517638-518070:-1:exon
so has part: feature:509582-509661:-1:exon
so has part: feature:496226-496309:-1:exon
so has part: feature:481234-481376:-1:exon
so has part: feature:480920-481097:-1:exon
so has part: feature:479105-479230:-1:exon
so has part: feature:474166-478654:-1:exon

position:518070:-1
position: 518070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517638-518070:-1:exon

position:517638:-1
position: 517638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:509582-509661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496226-496309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:481234-481376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480920-481097:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479105-479230:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474166-478654:-1:exon

FAM168B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: FAM168B
product: family with sequence similarity 168 member B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041739382.1
SIO_010081: FAM168B
subclass of: SO_0000673
so part of: FAM168B
location: complement(join(474166..478654,479105..479230,480920..481097,481234..481376,496226..496309,509582..509661,517095..517213,517638..518070))
location: region:474166-518070:-1
so has part: feature:517638-518070:-1:exon
so has part: feature:517095-517213:-1:exon
so has part: feature:509582-509661:-1:exon
so has part: feature:496226-496309:-1:exon
so has part: feature:481234-481376:-1:exon
so has part: feature:480920-481097:-1:exon
so has part: feature:479105-479230:-1:exon
so has part: feature:474166-478654:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:517638-518070:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517095-517213:-1:exon

position:517095:-1
position: 517095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517213:-1
position: 517213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:509582-509661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:496226-496309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:481234-481376:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480920-481097:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479105-479230:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:474166-478654:-1:exon

FAM168B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: FAM168B
product: family with sequence similarity 168 member B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041739383.1
SIO_010081: FAM168B
subclass of: SO_0000673
so part of: FAM168B
location: complement(join(474166..478654,479105..479230,480920..481097,481234..481376,496226..496309,509582..509661,517095..517615))
location: region:474166-517615:-1
so has part: feature:517095-517615:-1:exon
so has part: feature:509582-509661:-1:exon
so has part: feature:496226-496309:-1:exon
so has part: feature:481234-481376:-1:exon
so has part: feature:480920-481097:-1:exon
so has part: feature:479105-479230:-1:exon
so has part: feature:474166-478654:-1:exon

position:517615:-1
position: 517615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517095-517615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:509582-509661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496226-496309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:481234-481376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480920-481097:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479105-479230:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474166-478654:-1:exon

FAM168B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: FAM168B
product: family with sequence similarity 168 member B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041739384.1
SIO_010081: FAM168B
subclass of: SO_0000673
so part of: FAM168B
location: complement(join(474166..478654,479105..479230,480920..481097,481234..481376,496226..496309,509582..509661,516395..516528))
location: region:474166-516528:-1
so has part: feature:516395-516528:-1:exon
so has part: feature:509582-509661:-1:exon
so has part: feature:496226-496309:-1:exon
so has part: feature:481234-481376:-1:exon
so has part: feature:480920-481097:-1:exon
so has part: feature:479105-479230:-1:exon
so has part: feature:474166-478654:-1:exon

position:516528:-1
position: 516528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516395-516528:-1:exon

position:516395:-1
position: 516395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:509582-509661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496226-496309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:481234-481376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480920-481097:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479105-479230:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474166-478654:-1:exon

FAM168B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: FAM168B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-associated neurite-outgrowth inhibitor
translation: MNPVYSPGSSGVPYANAKGIGYPAGFPMGYAAAAPAYSPNMYPGANPTFQTGYTPGTPYKVSCSPTSGAVPPYSSSPNPYQTAVYPVRSAYPQQSPYAQQGTYYTQPLYAAPPHVIHHTTVVQPNGMPATVYPAPIPPPRGNGVTMGMVAGTTMAMSAGTLLTAHSPTPVAPHPVTVPTYRAPGTPTYSYVPPQW
SIO_010081: FAM168B
subclass of: SO_0000673
so part of: FAM168B
location: complement(join(479118..479230,480920..481097,481234..481376,496226..496309,509582..509651))
location: region:479118-509651:-1
so has part: feature:509582-509651:-1:exon
so has part: feature:496226-496309:-1:exon
so has part: feature:481234-481376:-1:exon
so has part: feature:480920-481097:-1:exon
so has part: feature:479118-479230:-1:exon

XP_041595314.1
type: Protein
SIO_000068: ncbiprotein

position:479118:-1
position: 479118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509651:-1
position: 509651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509582-509651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496226-496309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481234-481376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480920-481097:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479118-479230:-1:exon

FAM168B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: FAM168B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-associated neurite-outgrowth inhibitor
translation: MNPVYSPGSSGVPYANAKGIGYPAGFPMGYAAAAPAYSPNMYPGANPTFQTGYTPGTPYKVSCSPTSGAVPPYSSSPNPYQTAVYPVRSAYPQQSPYAQQGTYYTQPLYAAPPHVIHHTTVVQPNGMPATVYPAPIPPPRGNGVTMGMVAGTTMAMSAGTLLTAHSPTPVAPHPVTVPTYRAPGTPTYSYVPPQW
SIO_010081: FAM168B
subclass of: SO_0000673
so part of: FAM168B
location: complement(join(479118..479230,480920..481097,481234..481376,496226..496309,509582..509651))
location: region:479118-509651:-1
so has part: feature:509582-509651:-1:exon
so has part: feature:496226-496309:-1:exon
so has part: feature:481234-481376:-1:exon
so has part: feature:480920-481097:-1:exon
so has part: feature:479118-479230:-1:exon

XP_041595315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509582-509651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496226-496309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481234-481376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480920-481097:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479118-479230:-1:exon

FAM168B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: FAM168B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-associated neurite-outgrowth inhibitor
translation: MNPVYSPGSSGVPYANAKGIGYPAGFPMGYAAAAPAYSPNMYPGANPTFQTGYTPGTPYKVSCSPTSGAVPPYSSSPNPYQTAVYPVRSAYPQQSPYAQQGTYYTQPLYAAPPHVIHHTTVVQPNGMPATVYPAPIPPPRGNGVTMGMVAGTTMAMSAGTLLTAHSPTPVAPHPVTVPTYRAPGTPTYSYVPPQW
SIO_010081: FAM168B
subclass of: SO_0000673
so part of: FAM168B
location: complement(join(479118..479230,480920..481097,481234..481376,496226..496309,509582..509651))
location: region:479118-509651:-1
so has part: feature:509582-509651:-1:exon
so has part: feature:496226-496309:-1:exon
so has part: feature:481234-481376:-1:exon
so has part: feature:480920-481097:-1:exon
so has part: feature:479118-479230:-1:exon

XP_041595316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509582-509651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496226-496309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481234-481376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480920-481097:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479118-479230:-1:exon

FAM168B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: FAM168B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-associated neurite-outgrowth inhibitor
translation: MNPVYSPGSSGVPYANAKGIGYPAGFPMGYAAAAPAYSPNMYPGANPTFQTGYTPGTPYKVSCSPTSGAVPPYSSSPNPYQTAVYPVRSAYPQQSPYAQQGTYYTQPLYAAPPHVIHHTTVVQPNGMPATVYPAPIPPPRGNGVTMGMVAGTTMAMSAGTLLTAHSPTPVAPHPVTVPTYRAPGTPTYSYVPPQW
SIO_010081: FAM168B
subclass of: SO_0000673
so part of: FAM168B
location: complement(join(479118..479230,480920..481097,481234..481376,496226..496309,509582..509651))
location: region:479118-509651:-1
so has part: feature:509582-509651:-1:exon
so has part: feature:496226-496309:-1:exon
so has part: feature:481234-481376:-1:exon
so has part: feature:480920-481097:-1:exon
so has part: feature:479118-479230:-1:exon

XP_041595317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509582-509651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496226-496309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481234-481376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480920-481097:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479118-479230:-1:exon

FAM168B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: FAM168B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-associated neurite-outgrowth inhibitor
translation: MNPVYSPGSSGVPYANAKGIGYPAGFPMGYAAAAPAYSPNMYPGANPTFQTGYTPGTPYKVSCSPTSGAVPPYSSSPNPYQTAVYPVRSAYPQQSPYAQQGTYYTQPLYAAPPHVIHHTTVVQPNGMPATVYPAPIPPPRGNGVTMGMVAGTTMAMSAGTLLTAHSPTPVAPHPVTVPTYRAPGTPTYSYVPPQW
SIO_010081: FAM168B
subclass of: SO_0000673
so part of: FAM168B
location: complement(join(479118..479230,480920..481097,481234..481376,496226..496309,509582..509651))
location: region:479118-509651:-1
so has part: feature:509582-509651:-1:exon
so has part: feature:496226-496309:-1:exon
so has part: feature:481234-481376:-1:exon
so has part: feature:480920-481097:-1:exon
so has part: feature:479118-479230:-1:exon

XP_041595318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509582-509651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496226-496309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481234-481376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480920-481097:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479118-479230:-1:exon

FAM168B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: FAM168B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-associated neurite-outgrowth inhibitor
translation: MNPVYSPGSSGVPYANAKGIGYPAGFPMGYAAAAPAYSPNMYPGANPTFQTGYTPGTPYKVSCSPTSGAVPPYSSSPNPYQTAVYPVRSAYPQQSPYAQQGTYYTQPLYAAPPHVIHHTTVVQPNGMPATVYPAPIPPPRGNGVTMGMVAGTTMAMSAGTLLTAHSPTPVAPHPVTVPTYRAPGTPTYSYVPPQW
SIO_010081: FAM168B
subclass of: SO_0000673
so part of: FAM168B
location: complement(join(479118..479230,480920..481097,481234..481376,496226..496309,509582..509651))
location: region:479118-509651:-1
so has part: feature:509582-509651:-1:exon
so has part: feature:496226-496309:-1:exon
so has part: feature:481234-481376:-1:exon
so has part: feature:480920-481097:-1:exon
so has part: feature:479118-479230:-1:exon

XP_041595319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509582-509651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496226-496309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481234-481376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480920-481097:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479118-479230:-1:exon

PLEKHB2
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: PLEKHB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 530303..580168
location: region:530303-580168:1
so has part: feature:530303-580168:1:exon
subclass of: SO_0000010

121481978
type: Gene
SIO_000068: ncbigene

position:530303:1
position: 530303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580168:1
position: 580168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530303-580168:1:exon

PLEKHB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: PLEKHB2
product: pleckstrin homology domain containing B2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739704.1
SIO_010081: PLEKHB2
subclass of: SO_0000673
so part of: PLEKHB2
location: join(530303..530417,543767..543810,548875..549027,550278..550380,560131..560170,561398..561487,572201..572306,577417..580168)
location: region:530303-580168:1
so has part: feature:530303-530417:1:exon
so has part: feature:543767-543810:1:exon
so has part: feature:548875-549027:1:exon
so has part: feature:550278-550380:1:exon
so has part: feature:560131-560170:1:exon
so has part: feature:561398-561487:1:exon
so has part: feature:572201-572306:1:exon
so has part: feature:577417-580168:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:530303-530417:1:exon

position:530417:1
position: 530417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:543767-543810:1:exon

position:543767:1
position: 543767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543810:1
position: 543810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:548875-549027:1:exon

position:548875:1
position: 548875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549027:1
position: 549027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:550278-550380:1:exon

position:550278:1
position: 550278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550380:1
position: 550380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:560131-560170:1:exon

position:560131:1
position: 560131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560170:1
position: 560170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:561398-561487:1:exon

position:561398:1
position: 561398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561487:1
position: 561487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:572201-572306:1:exon

position:572201:1
position: 572201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572306:1
position: 572306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:577417-580168:1:exon

position:577417:1
position: 577417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLEKHB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: PLEKHB2
product: pleckstrin homology domain containing B2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041739705.1
SIO_010081: PLEKHB2
subclass of: SO_0000673
so part of: PLEKHB2
location: join(530493..530894,543767..543810,548875..549027,550278..550380,560131..560170,561398..561487,572201..572306,577417..580168)
location: region:530493-580168:1
so has part: feature:530493-530894:1:exon
so has part: feature:543767-543810:1:exon
so has part: feature:548875-549027:1:exon
so has part: feature:550278-550380:1:exon
so has part: feature:560131-560170:1:exon
so has part: feature:561398-561487:1:exon
so has part: feature:572201-572306:1:exon
so has part: feature:577417-580168:1:exon

position:530493:1
position: 530493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530493-530894:1:exon

position:530894:1
position: 530894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:543767-543810:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548875-549027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550278-550380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560131-560170:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:561398-561487:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:572201-572306:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:577417-580168:1:exon

PLEKHB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: PLEKHB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family B member 2 isoform X1
translation: MAFVKSGWLLRQSTILKRWKKNWFDLWSNGHLIYYDDQTRQSIEDKVHMPVDCINIRTGRECRDIQPPDGKPKECMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSRTNTAYVGSEVLYDETAVASSPPPYTAYATPTPETYGCGPYSGAYPPGTQVVYAANGQAYAVPYQYPYAGLYGQQPANQVIIQERYRDNDSDLALGMLAGAATGMALGSLFWVF
SIO_010081: PLEKHB2
subclass of: SO_0000673
so part of: PLEKHB2
location: join(543774..543810,548875..549027,550278..550380,560131..560170,561398..561487,572201..572306,577417..577553)
location: region:543774-577553:1
so has part: feature:543774-543810:1:exon
so has part: feature:548875-549027:1:exon
so has part: feature:550278-550380:1:exon
so has part: feature:560131-560170:1:exon
so has part: feature:561398-561487:1:exon
so has part: feature:572201-572306:1:exon
so has part: feature:577417-577553:1:exon

XP_041595638.1
type: Protein
SIO_000068: ncbiprotein

position:543774:1
position: 543774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577553:1
position: 577553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543774-543810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548875-549027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:550278-550380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560131-560170:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561398-561487:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572201-572306:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577417-577553:1:exon

PLEKHB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: PLEKHB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family B member 2 isoform X1
translation: MAFVKSGWLLRQSTILKRWKKNWFDLWSNGHLIYYDDQTRQSIEDKVHMPVDCINIRTGRECRDIQPPDGKPKECMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSRTNTAYVGSEVLYDETAVASSPPPYTAYATPTPETYGCGPYSGAYPPGTQVVYAANGQAYAVPYQYPYAGLYGQQPANQVIIQERYRDNDSDLALGMLAGAATGMALGSLFWVF
SIO_010081: PLEKHB2
subclass of: SO_0000673
so part of: PLEKHB2
location: join(543774..543810,548875..549027,550278..550380,560131..560170,561398..561487,572201..572306,577417..577553)
location: region:543774-577553:1
so has part: feature:543774-543810:1:exon
so has part: feature:548875-549027:1:exon
so has part: feature:550278-550380:1:exon
so has part: feature:560131-560170:1:exon
so has part: feature:561398-561487:1:exon
so has part: feature:572201-572306:1:exon
so has part: feature:577417-577553:1:exon

XP_041595639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:543774-543810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548875-549027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:550278-550380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560131-560170:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561398-561487:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572201-572306:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577417-577553:1:exon

PLEKHB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: PLEKHB2
product: pleckstrin homology domain containing B2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041739706.1
SIO_010081: PLEKHB2
subclass of: SO_0000673
so part of: PLEKHB2
location: join(548941..549027,561398..561487,572201..572306,577417..580168)
location: region:548941-580168:1
so has part: feature:548941-549027:1:exon
so has part: feature:561398-561487:1:exon
so has part: feature:572201-572306:1:exon
so has part: feature:577417-580168:1:exon

position:548941:1
position: 548941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548941-549027:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:561398-561487:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:572201-572306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577417-580168:1:exon

PLEKHB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: PLEKHB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family B member 2 isoform X2
translation: MMTKLGRALRIRSICQWTALISAPGGSVGAYVGSEVLYDETAVASSPPPYTAYATPTPETYGCGPYSGAYPPGTQVVYAANGQAYAVPYQYPYAGLYGQQPANQVIIQERYRDNDSDLALGMLAGAATGMALGSLFWVF
SIO_010081: PLEKHB2
subclass of: SO_0000673
so part of: PLEKHB2
location: join(548941..549027,561398..561487,572201..572306,577417..577553)
location: region:548941-577553:1
so has part: feature:548941-549027:1:exon
so has part: feature:561398-561487:1:exon
so has part: feature:572201-572306:1:exon
so has part: feature:577417-577553:1:exon

XP_041595640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548941-549027:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:561398-561487:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:572201-572306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577417-577553:1:exon

LOC121482101
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1083552..1085536)
location: region:1083552-1085536:-1
so has part: feature:1083552-1085536:-1:exon

121482101
type: Gene
SIO_000068: ncbigene

position:1083552:-1
position: 1083552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085536:-1
position: 1085536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1083552-1085536:-1:exon

LOC121482101
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482101
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC121482101
subclass of: SO_0000673
so part of: LOC121482101
location: complement(1083552..1083784)
location: region:1083552-1083784:-1
so has part: feature:1083552-1083784:-1:exon

position:1083784:-1
position: 1083784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1083552-1083784:-1:exon

LOC121482101
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482101
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC121482101
subclass of: SO_0000673
so part of: LOC121482101
location: complement(1083975..1085536)
location: region:1083975-1085536:-1
so has part: feature:1083975-1085536:-1:exon

position:1083975:-1
position: 1083975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1083975-1085536:-1:exon

LOC121482102
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1459695..1460523
location: region:1459695-1460523:1
so has part: feature:1459695-1460523:1:exon

121482102
type: Gene
SIO_000068: ncbigene

position:1459695:1
position: 1459695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1460523:1
position: 1460523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1459695-1460523:1:exon

LOC121482102
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482102
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121482102
subclass of: SO_0000673
so part of: LOC121482102
location: 1459695..1460523
location: region:1459695-1460523:1
so has part: feature:1459695-1460523:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1459695-1460523:1:exon

LOC121482194
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482194
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1797522..1797625
location: region:1797522-1797625:1
so has part: feature:1797522-1797625:1:exon
subclass of: SO_0000623

121482194
type: Gene
SIO_000068: ncbigene

position:1797522:1
position: 1797522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1797625:1
position: 1797625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1797522-1797625:1:exon

LOC121482194
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: snRNA
gene: LOC121482194
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005985550.1
SIO_010081: LOC121482194
subclass of: SO_0000673
so part of: LOC121482194
location: 1797522..1797625
location: region:1797522-1797625:1
so has part: feature:1797522-1797625:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1797522-1797625:1:exon

LOC121482204
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482204
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1869027..1869130
location: region:1869027-1869130:1
so has part: feature:1869027-1869130:1:exon
subclass of: SO_0000623

121482204
type: Gene
SIO_000068: ncbigene

position:1869027:1
position: 1869027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1869130:1
position: 1869130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1869027-1869130:1:exon

LOC121482204
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: snRNA
gene: LOC121482204
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005985558.1
SIO_010081: LOC121482204
subclass of: SO_0000673
so part of: LOC121482204
location: 1869027..1869130
location: region:1869027-1869130:1
so has part: feature:1869027-1869130:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1869027-1869130:1:exon

LOC121481824
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121481824
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2007892..2027603)
location: region:2007892-2027603:-1
so has part: feature:2007892-2027603:-1:exon
subclass of: SO_0000011

121481824
type: Gene
SIO_000068: ncbigene

position:2007892:-1
position: 2007892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2027603:-1
position: 2027603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2007892-2027603:-1:exon

LOC121481824
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: lncRNA
gene: LOC121481824
product: uncharacterized LOC121481824
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005985431.1
SIO_010081: LOC121481824
subclass of: SO_0000673
so part of: LOC121481824
location: complement(join(2007892..2010738,2025905..2026028,2027260..2027603))
location: region:2007892-2027603:-1
so has part: feature:2027260-2027603:-1:exon
so has part: feature:2025905-2026028:-1:exon
so has part: feature:2007892-2010738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2027260-2027603:-1:exon

position:2027260:-1
position: 2027260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2025905-2026028:-1:exon

position:2025905:-1
position: 2025905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2026028:-1
position: 2026028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2007892-2010738:-1:exon

position:2010738:-1
position: 2010738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121482103
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2067056..2068333
location: region:2067056-2068333:1
so has part: feature:2067056-2068333:1:exon

121482103
type: Gene
SIO_000068: ncbigene

position:2067056:1
position: 2067056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2068333:1
position: 2068333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2067056-2068333:1:exon

LOC121482103
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121482103
subclass of: SO_0000673
so part of: LOC121482103
location: 2067056..2067068
location: region:2067056-2067068:1
so has part: feature:2067056-2067068:1:exon

position:2067068:1
position: 2067068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2067056-2067068:1:exon

LOC121482103
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121482103
subclass of: SO_0000673
so part of: LOC121482103
location: 2067181..2067742
location: region:2067181-2067742:1
so has part: feature:2067181-2067742:1:exon

position:2067181:1
position: 2067181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2067742:1
position: 2067742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2067181-2067742:1:exon

LOC121482103
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121482103
subclass of: SO_0000673
so part of: LOC121482103
location: 2067907..2068333
location: region:2067907-2068333:1
so has part: feature:2067907-2068333:1:exon

position:2067907:1
position: 2067907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2067907-2068333:1:exon

LOC121481823
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121481823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2075107..2080991
location: region:2075107-2080991:1
so has part: feature:2075107-2080991:1:exon
subclass of: SO_0000011

121481823
type: Gene
SIO_000068: ncbigene

position:2075107:1
position: 2075107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2080991:1
position: 2080991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2075107-2080991:1:exon

LOC121481823
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: lncRNA
gene: LOC121481823
product: uncharacterized LOC121481823
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005985430.1
SIO_010081: LOC121481823
subclass of: SO_0000673
so part of: LOC121481823
location: join(2075107..2075273,2076796..2077207,2078130..2080991)
location: region:2075107-2080991:1
so has part: feature:2075107-2075273:1:exon
so has part: feature:2076796-2077207:1:exon
so has part: feature:2078130-2080991:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2075107-2075273:1:exon

position:2075273:1
position: 2075273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2076796-2077207:1:exon

position:2076796:1
position: 2076796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2077207:1
position: 2077207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2078130-2080991:1:exon

position:2078130:1
position: 2078130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HS6ST1
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: HS6ST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2124527..2166620
location: region:2124527-2166620:1
so has part: feature:2124527-2166620:1:exon
subclass of: SO_0000010

121481872
type: Gene
SIO_000068: ncbigene

position:2124527:1
position: 2124527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2166620:1
position: 2166620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2124527-2166620:1:exon

HS6ST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: HS6ST1
product: heparan sulfate 6-O-sulfotransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739476.1
SIO_010081: HS6ST1
subclass of: SO_0000673
so part of: HS6ST1
location: join(2124527..2125316,2163104..2166620)
location: region:2124527-2166620:1
so has part: feature:2124527-2125316:1:exon
so has part: feature:2163104-2166620:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2124527-2125316:1:exon

position:2125316:1
position: 2125316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2163104-2166620:1:exon

position:2163104:1
position: 2163104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HS6ST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: HS6ST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heparan-sulfate 6-O-sulfotransferase 1
translation: MRRRRGGGRTMVERASRFVLVVAGSACFMLILYQYAGPGLSLGAPGGRAPPDDLDLFPTPDPHYERKYYFPVRELERSLRFDMKGDDVIVFLHIQKTGGTTFGRHLVQNVRLEVPCDCRPGQKKCTCYRPNRRETWLFSRFSTGWSCGLHADWTELTSCVPGVLDRRDPAALRTPRKFYYITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQEFMDCPYNLANNRQVRMLADLSLVGCYNLSFIPEGKRAQLLLESAKKNLRGMAFFGLTEFQRKTQYLFERTFNLKFIRPFMQYNSTRAGGVEVDEDTIRRIEELNDLDMQLYDYAKDLFQQRYQYKRQLERREQRLKSREERLLHRAKEALPREDADEPGRVPTEDYMSHIIEKW
SIO_010081: HS6ST1
subclass of: SO_0000673
so part of: HS6ST1
location: join(2124790..2125316,2163104..2163812)
location: region:2124790-2163812:1
so has part: feature:2124790-2125316:1:exon
so has part: feature:2163104-2163812:1:exon

XP_041595410.1
type: Protein
SIO_000068: ncbiprotein

position:2124790:1
position: 2124790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2163812:1
position: 2163812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2124790-2125316:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2163104-2163812:1:exon

UGGT1
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: UGGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2210666..2331097)
location: region:2210666-2331097:-1
so has part: feature:2210666-2331097:-1:exon
subclass of: SO_0000010

121481944
type: Gene
SIO_000068: ncbigene

position:2210666:-1
position: 2210666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2331097:-1
position: 2331097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2210666-2331097:-1:exon

UGGT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: UGGT1
product: UDP-glucose glycoprotein glucosyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739615.1
SIO_010081: UGGT1
subclass of: SO_0000673
so part of: UGGT1
location: complement(join(2210666..2215140,2217172..2217340,2217811..2217927,2224602..2224716,2225737..2225897,2227698..2227880,2229004..2229088,2230233..2230337,2231089..2231177,2232396..2232480,2234243..2234328,2234827..2234985,2238862..2239051,2240339..2240418,2241928..2242030,2250806..2250901,2253186..2253316,2254120..2254251,2255063..2255269,2257336..2257430,2258730..2258828,2261139..2261259,2271199..2271363,2287171..2287302,2289624..2289759,2291505..2291590,2292876..2292995,2293496..2293646,2295079..2295170,2299803..2299863,2301193..2301292,2302186..2302286,2304441..2304519,2305636..2305732,2307056..2307230,2309990..2310102,2317854..2317984,2320593..2320675,2324963..2325098,2330864..2331097))
location: region:2210666-2331097:-1
so has part: feature:2330864-2331097:-1:exon
so has part: feature:2324963-2325098:-1:exon
so has part: feature:2320593-2320675:-1:exon
so has part: feature:2317854-2317984:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:2330864-2331097:-1:exon

position:2330864:-1
position: 2330864
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:2324963-2325098:-1:exon

position:2324963:-1
position: 2324963
reference: sequence
type: ReverseStrandPosition
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position:2325098:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:2320593-2320675:-1:exon

position:2320593:-1
position: 2320593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2320675:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:2317854-2317984:-1:exon

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reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:2309990-2310102:-1:exon

position:2309990:-1
position: 2309990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2310102:-1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:2307056-2307230:-1:exon

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position: 2307056
reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:2305636-2305732:-1:exon

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reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:2304441-2304519:-1:exon

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type: ReverseStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:2302186-2302286:-1:exon

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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:2301193-2301292:-1:exon

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type: ReverseStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:2299803-2299863:-1:exon

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urn:…
SIO_000300: 12
SIO_000628: feature:2295079-2295170:-1:exon

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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:2293496-2293646:-1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:2292876-2292995:-1:exon

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urn:…
SIO_000300: 15
SIO_000628: feature:2291505-2291590:-1:exon

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urn:…
SIO_000300: 16
SIO_000628: feature:2289624-2289759:-1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:2287171-2287302:-1:exon

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position:2287302:-1
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urn:…
SIO_000300: 18
SIO_000628: feature:2271199-2271363:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:2261139-2261259:-1:exon

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urn:…
SIO_000300: 20
SIO_000628: feature:2258730-2258828:-1:exon

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urn:…
SIO_000300: 21
SIO_000628: feature:2257336-2257430:-1:exon

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urn:…
SIO_000300: 22
SIO_000628: feature:2255063-2255269:-1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:2254120-2254251:-1:exon

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urn:…
SIO_000300: 24
SIO_000628: feature:2253186-2253316:-1:exon

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urn:…
SIO_000300: 25
SIO_000628: feature:2250806-2250901:-1:exon

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urn:…
SIO_000300: 26
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urn:…
SIO_000300: 27
SIO_000628: feature:2240339-2240418:-1:exon

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urn:…
SIO_000300: 28
SIO_000628: feature:2238862-2239051:-1:exon

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urn:…
SIO_000300: 29
SIO_000628: feature:2234827-2234985:-1:exon

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urn:…
SIO_000300: 30
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urn:…
SIO_000300: 31
SIO_000628: feature:2232396-2232480:-1:exon

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urn:…
SIO_000300: 32
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urn:…
SIO_000300: 33
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urn:…
SIO_000300: 34
SIO_000628: feature:2229004-2229088:-1:exon

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urn:…
SIO_000300: 35
SIO_000628: feature:2227698-2227880:-1:exon

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urn:…
SIO_000300: 36
SIO_000628: feature:2225737-2225897:-1:exon

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urn:…
SIO_000300: 37
SIO_000628: feature:2224602-2224716:-1:exon

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urn:…
SIO_000300: 38
SIO_000628: feature:2217811-2217927:-1:exon

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urn:…
SIO_000300: 39
SIO_000628: feature:2217172-2217340:-1:exon

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urn:…
SIO_000300: 40
SIO_000628: feature:2210666-2215140:-1:exon

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UGGT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: UGGT1
product: UDP-glucose glycoprotein glucosyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739614.1
SIO_010081: UGGT1
subclass of: SO_0000673
so part of: UGGT1
location: complement(join(2210666..2215140,2217172..2217340,2217811..2217927,2224602..2224716,2225737..2225897,2227698..2227880,2229004..2229088,2230233..2230337,2231089..2231177,2232396..2232480,2234243..2234328,2234827..2234985,2238862..2239051,2240339..2240418,2241928..2242030,2250806..2250901,2253186..2253316,2254120..2254251,2255063..2255269,2257336..2257430,2257932..2257955,2258730..2258828,2261139..2261259,2271199..2271363,2287171..2287302,2289624..2289759,2291505..2291590,2292876..2292995,2293496..2293646,2295079..2295170,2299803..2299863,2301193..2301292,2302186..2302286,2304441..2304519,2305636..2305732,2307056..2307230,2309990..2310102,2317854..2317984,2320593..2320675,2324963..2325098,2330864..2331097))
location: region:2210666-2331097:-1
so has part: feature:2330864-2331097:-1:exon
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so has part: feature:2299803-2299863:-1:exon
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so has part: feature:2217172-2217340:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:2330864-2331097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2324963-2325098:-1:exon

urn:…
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SIO_000628: feature:2320593-2320675:-1:exon

urn:…
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SIO_000628: feature:2317854-2317984:-1:exon

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SIO_000628: feature:2309990-2310102:-1:exon

urn:…
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urn:…
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urn:…
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SIO_000628: feature:2304441-2304519:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2302186-2302286:-1:exon

urn:…
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SIO_000628: feature:2301193-2301292:-1:exon

urn:…
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SIO_000628: feature:2299803-2299863:-1:exon

urn:…
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SIO_000628: feature:2295079-2295170:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2293496-2293646:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2292876-2292995:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2291505-2291590:-1:exon

urn:…
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SIO_000628: feature:2289624-2289759:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2287171-2287302:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2271199-2271363:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2261139-2261259:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2258730-2258828:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2257932-2257955:-1:exon

position:2257932:-1
position: 2257932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2257955:-1
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urn:…
SIO_000300: 22
SIO_000628: feature:2257336-2257430:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2255063-2255269:-1:exon

urn:…
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SIO_000628: feature:2254120-2254251:-1:exon

urn:…
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SIO_000628: feature:2253186-2253316:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2250806-2250901:-1:exon

urn:…
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SIO_000628: feature:2241928-2242030:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2240339-2240418:-1:exon

urn:…
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SIO_000628: feature:2238862-2239051:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2234827-2234985:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2234243-2234328:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2232396-2232480:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2231089-2231177:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2230233-2230337:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2229004-2229088:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2227698-2227880:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2225737-2225897:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2224602-2224716:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2217811-2217927:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2217172-2217340:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2210666-2215140:-1:exon

UGGT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: UGGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucose:glycoprotein glucosyltransferase 1 isoform X2
translation: MGLLIVFIGLWLFSSVKADSKAITTSLTTKWFSTPLLLEVSEFLAEDSQEKFWNFVEASQNIGSSDHHGTDYSYYHAILETAFQFLSPLQQNLLKFCLSLHSYSATIQAFQQIAADEPPPEECNSFFSVHGKKTCDFDTLETLLLTASERPKPLLFKGDHRYPSSNLESPVVIFYSEIGYEEFYNFHHQLISESNAGKINYVFRHYILNPRKEPVYLSGYGVELAIKSTEYKAKDDTQVKGTEVNTTVIGENDPIDEVQGFLFGKLRDLHPDLKGQLKELRKHLVESTNEMAPLKVWQLQDLSFQTAARILAAPIELALVVMKDLSQNFPTKARAITKTAVSLELRSEVEENQKYFKGTLGLQPGDSALFINGLHIDLDTQDIFSLFDVLRNEARVMEGLHRLGIEGLSLHNVLKLNIQPSEADYAVDIRSPAISWINNLEVDSRYNSWPSSLQELLRPTFPGVIRQIRKNLHNMVFIVDPPHETTAELINTAEMFLSNHIPLRIGLIFVVNDSEDVDGMQDAGVAILRAYNYVAQEVDDYHAFQTLIHIYNKVRTGEKVKVEHVVSVLEKKYPYVEVNSILGIDSAYDQNRKEARGYYEQTGVGPLPVVLFNGMPFEKEQLDPDELETITMHKILETTTFFQRAVYLGELSHDQDVVEYIMNQPNVVPRINSRILTSEREYLDLTATNNFFVDDYARFSVLDSQGKTAAIANSMNYLTKKDDSFIRPVTFWIVGDFDSPSGRQLLYDAIKHQKSSNNVRISMINNPSEDINYKNTQISRAIWAALQTQTSNSAKNFITKMAKEETAEALAAGADIGEFSVGGMDFSLFKEVFESSKMDFILSHAMYCRDVLKLKKGQRAVISNGRIIGPLEDSELFNQDDFHLLENIILKTSGQKIKSHIQQLRVEEDVASDLVMKVDALLSAQPKGDARIEYQFFEDRHSAIKMRPKEGETYFDVVVVIDPVTREAQRLAPLLLVLTQLINMNLRVFMNCQSKLSDMPLKSFYRYVLEPEISFTPDNSFAKGPIAKFLDMPQSPLFTLNLNTPESWMVESVRTPYDLDNIYLEEVDSVVAAEYELEYLLLEGHCYDITTGQPPRGLQFTLGTSANPVIVDTIVMANLGYFQLKANPGAWILRLRKGRSEDIYRIYSHDGTDSPPDADEVVVVLNNFKSKIIKVKVQKKADMVNEDLLSDGTIENESGFWDSFKWGFTGGQKTEEVKQDKDDIINIFSVASGHLYERFLRIMMLSVLKNTKTPVKFWFLKNYLSPTFKEFIPYMANEYNFQYELVQYKWPRWLHQQTEKQRIIWGYKILFLDVLFPLVVDKFLFVDADQIVRTDLKELRDFNLDGAPYGYTPFCDSRKEMDGYRFWKSGYWASHLAGRKYHISALYVVDLKKFRKIAAGDRLRGQYQGLSQDPNSLSNLDQDLPNNMIHQVPIKSLPQEWLWCETWCDDASKKRAKTIDLCNNPMTKEPKLEAAVRIVPEWQDYDQEIKQLQTRFQREKETGVLDKEKTTQESRWEGPQKREEL
SIO_010081: UGGT1
subclass of: SO_0000673
so part of: UGGT1
location: complement(join(2215115..2215140,2217172..2217340,2217811..2217927,2224602..2224716,2225737..2225897,2227698..2227880,2229004..2229088,2230233..2230337,2231089..2231177,2232396..2232480,2234243..2234328,2234827..2234985,2238862..2239051,2240339..2240418,2241928..2242030,2250806..2250901,2253186..2253316,2254120..2254251,2255063..2255269,2257336..2257430,2258730..2258828,2261139..2261259,2271199..2271363,2287171..2287302,2289624..2289759,2291505..2291590,2292876..2292995,2293496..2293646,2295079..2295170,2299803..2299863,2301193..2301292,2302186..2302286,2304441..2304519,2305636..2305732,2307056..2307230,2309990..2310102,2317854..2317984,2320593..2320675,2324963..2325084))
location: region:2215115-2325084:-1
so has part: feature:2324963-2325084:-1:exon
so has part: feature:2320593-2320675:-1:exon
so has part: feature:2317854-2317984:-1:exon
so has part: feature:2309990-2310102:-1:exon
so has part: feature:2307056-2307230:-1:exon
so has part: feature:2305636-2305732:-1:exon
so has part: feature:2304441-2304519:-1:exon
so has part: feature:2302186-2302286:-1:exon
so has part: feature:2301193-2301292:-1:exon
so has part: feature:2299803-2299863:-1:exon
so has part: feature:2295079-2295170:-1:exon
so has part: feature:2293496-2293646:-1:exon
so has part: feature:2292876-2292995:-1:exon
so has part: feature:2291505-2291590:-1:exon
so has part: feature:2289624-2289759:-1:exon
so has part: feature:2287171-2287302:-1:exon
so has part: feature:2271199-2271363:-1:exon
so has part: feature:2261139-2261259:-1:exon
so has part: feature:2258730-2258828:-1:exon
so has part: feature:2257336-2257430:-1:exon
so has part: feature:2255063-2255269:-1:exon
so has part: feature:2254120-2254251:-1:exon
so has part: feature:2253186-2253316:-1:exon
so has part: feature:2250806-2250901:-1:exon
so has part: feature:2241928-2242030:-1:exon
so has part: feature:2240339-2240418:-1:exon
so has part: feature:2238862-2239051:-1:exon
so has part: feature:2234827-2234985:-1:exon
so has part: feature:2234243-2234328:-1:exon
so has part: feature:2232396-2232480:-1:exon
so has part: feature:2231089-2231177:-1:exon
so has part: feature:2230233-2230337:-1:exon
so has part: feature:2229004-2229088:-1:exon
so has part: feature:2227698-2227880:-1:exon
so has part: feature:2225737-2225897:-1:exon
so has part: feature:2224602-2224716:-1:exon
so has part: feature:2217811-2217927:-1:exon
so has part: feature:2217172-2217340:-1:exon
so has part: feature:2215115-2215140:-1:exon

XP_041595549.1
type: Protein
SIO_000068: ncbiprotein

position:2215115:-1
position: 2215115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2325084:-1
position: 2325084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2324963-2325084:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2320593-2320675:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2317854-2317984:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2309990-2310102:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2307056-2307230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2305636-2305732:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2304441-2304519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2302186-2302286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2301193-2301292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2299803-2299863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2295079-2295170:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2293496-2293646:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2292876-2292995:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2291505-2291590:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2289624-2289759:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2287171-2287302:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2271199-2271363:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2261139-2261259:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2258730-2258828:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2257336-2257430:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2255063-2255269:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2254120-2254251:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2253186-2253316:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2250806-2250901:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2241928-2242030:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2240339-2240418:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2238862-2239051:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2234827-2234985:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2234243-2234328:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2232396-2232480:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2231089-2231177:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2230233-2230337:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2229004-2229088:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2227698-2227880:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2225737-2225897:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2224602-2224716:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2217811-2217927:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2217172-2217340:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2215115-2215140:-1:exon

UGGT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: UGGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucose:glycoprotein glucosyltransferase 1 isoform X1
translation: MGLLIVFIGLWLFSSVKADSKAITTSLTTKWFSTPLLLEVSEFLAEDSQEKFWNFVEASQNIGSSDHHGTDYSYYHAILETAFQFLSPLQQNLLKFCLSLHSYSATIQAFQQIAADEPPPEECNSFFSVHGKKTCDFDTLETLLLTASERPKPLLFKGDHRYPSSNLESPVVIFYSEIGYEEFYNFHHQLISESNAGKINYVFRHYILNPRKEPVYLSGYGVELAIKSTEYKAKDDTQVKGTEVNTTVIGENDPIDEVQGFLFGKLRDLHPDLKGQLKELRKHLVESTNEMAPLKVWQLQDLSFQTAARILAAPIELALVVMKDLSQNFPTKARAITKTAVSLELRSEVEENQKYFKGTLGLQPGDSALFINGLHIDLDTQDIFSLFDVLRNEARVMEGLHRLGIEGLSLHNVLKLNIQPSEADYAVDIRSPAISWINNLEVDSRYNSWPSSLQELLRPTFPGVIRQIRKNLHNMVFIVDPPHETTAELINTAEMFLSNHIPLRIGLIFVVNDSEDVDGMQDAGVAILRAYNYVAQEVDDYHAFQTLIHIYNKVRTGEKVKVEHVVSVLEKKYPYVEVNSILGIDSAYDQNRKEARGYYEQTGVGPLPVVLFNGMPFEKEQLDPDELETITMHKILETTTFFQRAVYLGELSHDQDVVEYIMNQPNVVPRINSRILTSEREYLDLTATNNFFVDDYARFSVLDSQGKTAAIANSMNYLTKKGMSSKEIYDDSFIRPVTFWIVGDFDSPSGRQLLYDAIKHQKSSNNVRISMINNPSEDINYKNTQISRAIWAALQTQTSNSAKNFITKMAKEETAEALAAGADIGEFSVGGMDFSLFKEVFESSKMDFILSHAMYCRDVLKLKKGQRAVISNGRIIGPLEDSELFNQDDFHLLENIILKTSGQKIKSHIQQLRVEEDVASDLVMKVDALLSAQPKGDARIEYQFFEDRHSAIKMRPKEGETYFDVVVVIDPVTREAQRLAPLLLVLTQLINMNLRVFMNCQSKLSDMPLKSFYRYVLEPEISFTPDNSFAKGPIAKFLDMPQSPLFTLNLNTPESWMVESVRTPYDLDNIYLEEVDSVVAAEYELEYLLLEGHCYDITTGQPPRGLQFTLGTSANPVIVDTIVMANLGYFQLKANPGAWILRLRKGRSEDIYRIYSHDGTDSPPDADEVVVVLNNFKSKIIKVKVQKKADMVNEDLLSDGTIENESGFWDSFKWGFTGGQKTEEVKQDKDDIINIFSVASGHLYERFLRIMMLSVLKNTKTPVKFWFLKNYLSPTFKEFIPYMANEYNFQYELVQYKWPRWLHQQTEKQRIIWGYKILFLDVLFPLVVDKFLFVDADQIVRTDLKELRDFNLDGAPYGYTPFCDSRKEMDGYRFWKSGYWASHLAGRKYHISALYVVDLKKFRKIAAGDRLRGQYQGLSQDPNSLSNLDQDLPNNMIHQVPIKSLPQEWLWCETWCDDASKKRAKTIDLCNNPMTKEPKLEAAVRIVPEWQDYDQEIKQLQTRFQREKETGVLDKEKTTQESRWEGPQKREEL
SIO_010081: UGGT1
subclass of: SO_0000673
so part of: UGGT1
location: complement(join(2215115..2215140,2217172..2217340,2217811..2217927,2224602..2224716,2225737..2225897,2227698..2227880,2229004..2229088,2230233..2230337,2231089..2231177,2232396..2232480,2234243..2234328,2234827..2234985,2238862..2239051,2240339..2240418,2241928..2242030,2250806..2250901,2253186..2253316,2254120..2254251,2255063..2255269,2257336..2257430,2257932..2257955,2258730..2258828,2261139..2261259,2271199..2271363,2287171..2287302,2289624..2289759,2291505..2291590,2292876..2292995,2293496..2293646,2295079..2295170,2299803..2299863,2301193..2301292,2302186..2302286,2304441..2304519,2305636..2305732,2307056..2307230,2309990..2310102,2317854..2317984,2320593..2320675,2324963..2325084))
location: region:2215115-2325084:-1
so has part: feature:2324963-2325084:-1:exon
so has part: feature:2320593-2320675:-1:exon
so has part: feature:2317854-2317984:-1:exon
so has part: feature:2309990-2310102:-1:exon
so has part: feature:2307056-2307230:-1:exon
so has part: feature:2305636-2305732:-1:exon
so has part: feature:2304441-2304519:-1:exon
so has part: feature:2302186-2302286:-1:exon
so has part: feature:2301193-2301292:-1:exon
so has part: feature:2299803-2299863:-1:exon
so has part: feature:2295079-2295170:-1:exon
so has part: feature:2293496-2293646:-1:exon
so has part: feature:2292876-2292995:-1:exon
so has part: feature:2291505-2291590:-1:exon
so has part: feature:2289624-2289759:-1:exon
so has part: feature:2287171-2287302:-1:exon
so has part: feature:2271199-2271363:-1:exon
so has part: feature:2261139-2261259:-1:exon
so has part: feature:2258730-2258828:-1:exon
so has part: feature:2257932-2257955:-1:exon
so has part: feature:2257336-2257430:-1:exon
so has part: feature:2255063-2255269:-1:exon
so has part: feature:2254120-2254251:-1:exon
so has part: feature:2253186-2253316:-1:exon
so has part: feature:2250806-2250901:-1:exon
so has part: feature:2241928-2242030:-1:exon
so has part: feature:2240339-2240418:-1:exon
so has part: feature:2238862-2239051:-1:exon
so has part: feature:2234827-2234985:-1:exon
so has part: feature:2234243-2234328:-1:exon
so has part: feature:2232396-2232480:-1:exon
so has part: feature:2231089-2231177:-1:exon
so has part: feature:2230233-2230337:-1:exon
so has part: feature:2229004-2229088:-1:exon
so has part: feature:2227698-2227880:-1:exon
so has part: feature:2225737-2225897:-1:exon
so has part: feature:2224602-2224716:-1:exon
so has part: feature:2217811-2217927:-1:exon
so has part: feature:2217172-2217340:-1:exon
so has part: feature:2215115-2215140:-1:exon

XP_041595548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2324963-2325084:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2320593-2320675:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2317854-2317984:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2309990-2310102:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2307056-2307230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2305636-2305732:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2304441-2304519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2302186-2302286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2301193-2301292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2299803-2299863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2295079-2295170:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2293496-2293646:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2292876-2292995:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2291505-2291590:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2289624-2289759:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2287171-2287302:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2271199-2271363:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2261139-2261259:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2258730-2258828:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2257932-2257955:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2257336-2257430:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2255063-2255269:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2254120-2254251:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2253186-2253316:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2250806-2250901:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2241928-2242030:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2240339-2240418:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2238862-2239051:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2234827-2234985:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2234243-2234328:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2232396-2232480:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2231089-2231177:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2230233-2230337:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2229004-2229088:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2227698-2227880:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2225737-2225897:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2224602-2224716:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2217811-2217927:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2217172-2217340:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2215115-2215140:-1:exon

SAP130
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: SAP130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2384473..2467824
location: region:2384473-2467824:1
so has part: feature:2384473-2467824:1:exon
subclass of: SO_0000010

121482072
type: Gene
SIO_000068: ncbigene

position:2384473:1
position: 2384473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2467824:1
position: 2467824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2384473-2467824:1:exon

SAP130
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: SAP130
product: Sin3A associated protein 130, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739878.1
SIO_010081: SAP130
subclass of: SO_0000673
so part of: SAP130
location: join(2384473..2384621,2386269..2386386,2395947..2396182,2396902..2397060,2398218..2398329,2399580..2399704,2401317..2401441,2413066..2413213,2413366..2413456,2413654..2413758,2418407..2418548,2421471..2421592,2426659..2426961,2427652..2427829,2435125..2435229,2449284..2449642,2452451..2452699,2452877..2453002,2465071..2465174,2466289..2466402,2466890..2467824)
location: region:2384473-2467824:1
so has part: feature:2384473-2384621:1:exon
so has part: feature:2386269-2386386:1:exon
so has part: feature:2395947-2396182:1:exon
so has part: feature:2396902-2397060:1:exon
so has part: feature:2398218-2398329:1:exon
so has part: feature:2399580-2399704:1:exon
so has part: feature:2401317-2401441:1:exon
so has part: feature:2413066-2413213:1:exon
so has part: feature:2413366-2413456:1:exon
so has part: feature:2413654-2413758:1:exon
so has part: feature:2418407-2418548:1:exon
so has part: feature:2421471-2421592:1:exon
so has part: feature:2426659-2426961:1:exon
so has part: feature:2427652-2427829:1:exon
so has part: feature:2435125-2435229:1:exon
so has part: feature:2449284-2449642:1:exon
so has part: feature:2452451-2452699:1:exon
so has part: feature:2452877-2453002:1:exon
so has part: feature:2465071-2465174:1:exon
so has part: feature:2466289-2466402:1:exon
so has part: feature:2466890-2467824:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2384473-2384621:1:exon

position:2384621:1
position: 2384621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2386269-2386386:1:exon

position:2386269:1
position: 2386269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2386386:1
position: 2386386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2395947-2396182:1:exon

position:2395947:1
position: 2395947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2396182:1
position: 2396182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2396902-2397060:1:exon

position:2396902:1
position: 2396902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2397060:1
position: 2397060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2398218-2398329:1:exon

position:2398218:1
position: 2398218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2398329:1
position: 2398329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2399580-2399704:1:exon

position:2399580:1
position: 2399580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2399704:1
position: 2399704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2401317-2401441:1:exon

position:2401317:1
position: 2401317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2401441:1
position: 2401441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2413066-2413213:1:exon

position:2413066:1
position: 2413066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2413213:1
position: 2413213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2413366-2413456:1:exon

position:2413366:1
position: 2413366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2413456:1
position: 2413456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2413654-2413758:1:exon

position:2413654:1
position: 2413654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2413758:1
position: 2413758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2418407-2418548:1:exon

position:2418407:1
position: 2418407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2418548:1
position: 2418548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2421471-2421592:1:exon

position:2421471:1
position: 2421471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2421592:1
position: 2421592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2426659-2426961:1:exon

position:2426659:1
position: 2426659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2426961:1
position: 2426961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2427652-2427829:1:exon

position:2427652:1
position: 2427652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2427829:1
position: 2427829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2435125-2435229:1:exon

position:2435125:1
position: 2435125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2435229:1
position: 2435229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2449284-2449642:1:exon

position:2449284:1
position: 2449284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2449642:1
position: 2449642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2452451-2452699:1:exon

position:2452451:1
position: 2452451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2452699:1
position: 2452699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2452877-2453002:1:exon

position:2452877:1
position: 2452877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2453002:1
position: 2453002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2465071-2465174:1:exon

position:2465071:1
position: 2465071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2465174:1
position: 2465174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2466289-2466402:1:exon

position:2466289:1
position: 2466289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2466402:1
position: 2466402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2466890-2467824:1:exon

position:2466890:1
position: 2466890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SAP130
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: SAP130
product: Sin3A associated protein 130, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739877.1
SIO_010081: SAP130
subclass of: SO_0000673
so part of: SAP130
location: join(2385264..2385471,2386269..2386386,2395947..2396182,2396902..2397060,2398218..2398329,2399580..2399704,2401317..2401441,2413066..2413213,2413366..2413456,2413654..2413758,2418407..2418548,2421471..2421592,2426659..2426961,2427652..2427829,2435125..2435229,2449284..2449642,2452451..2452699,2452877..2453002,2465071..2465174,2466289..2466402,2466890..2467824)
location: region:2385264-2467824:1
so has part: feature:2385264-2385471:1:exon
so has part: feature:2386269-2386386:1:exon
so has part: feature:2395947-2396182:1:exon
so has part: feature:2396902-2397060:1:exon
so has part: feature:2398218-2398329:1:exon
so has part: feature:2399580-2399704:1:exon
so has part: feature:2401317-2401441:1:exon
so has part: feature:2413066-2413213:1:exon
so has part: feature:2413366-2413456:1:exon
so has part: feature:2413654-2413758:1:exon
so has part: feature:2418407-2418548:1:exon
so has part: feature:2421471-2421592:1:exon
so has part: feature:2426659-2426961:1:exon
so has part: feature:2427652-2427829:1:exon
so has part: feature:2435125-2435229:1:exon
so has part: feature:2449284-2449642:1:exon
so has part: feature:2452451-2452699:1:exon
so has part: feature:2452877-2453002:1:exon
so has part: feature:2465071-2465174:1:exon
so has part: feature:2466289-2466402:1:exon
so has part: feature:2466890-2467824:1:exon

position:2385264:1
position: 2385264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2385264-2385471:1:exon

position:2385471:1
position: 2385471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2386269-2386386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2395947-2396182:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2396902-2397060:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2398218-2398329:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2399580-2399704:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2401317-2401441:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2413066-2413213:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2413366-2413456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2413654-2413758:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2418407-2418548:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2421471-2421592:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2426659-2426961:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2427652-2427829:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2435125-2435229:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2449284-2449642:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2452451-2452699:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2452877-2453002:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2465071-2465174:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2466289-2466402:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2466890-2467824:1:exon

SAP130
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: SAP130
product: Sin3A associated protein 130, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739879.1
SIO_010081: SAP130
subclass of: SO_0000673
so part of: SAP130
location: join(2385264..2385471,2386269..2386386,2395947..2396182,2396902..2397060,2398218..2398329,2399580..2399704,2401317..2401441,2413066..2413213,2413366..2413456,2413654..2413758,2418407..2418548,2421471..2421592,2426659..2426961,2427652..2427829,2449284..2449642,2452451..2452699,2452877..2453002,2465071..2465174,2466289..2466402,2466890..2467824)
location: region:2385264-2467824:1
so has part: feature:2385264-2385471:1:exon
so has part: feature:2386269-2386386:1:exon
so has part: feature:2395947-2396182:1:exon
so has part: feature:2396902-2397060:1:exon
so has part: feature:2398218-2398329:1:exon
so has part: feature:2399580-2399704:1:exon
so has part: feature:2401317-2401441:1:exon
so has part: feature:2413066-2413213:1:exon
so has part: feature:2413366-2413456:1:exon
so has part: feature:2413654-2413758:1:exon
so has part: feature:2418407-2418548:1:exon
so has part: feature:2421471-2421592:1:exon
so has part: feature:2426659-2426961:1:exon
so has part: feature:2427652-2427829:1:exon
so has part: feature:2449284-2449642:1:exon
so has part: feature:2452451-2452699:1:exon
so has part: feature:2452877-2453002:1:exon
so has part: feature:2465071-2465174:1:exon
so has part: feature:2466289-2466402:1:exon
so has part: feature:2466890-2467824:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2385264-2385471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2386269-2386386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2395947-2396182:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2396902-2397060:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2398218-2398329:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2399580-2399704:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2401317-2401441:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2413066-2413213:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2413366-2413456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2413654-2413758:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2418407-2418548:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2421471-2421592:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2426659-2426961:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2427652-2427829:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2449284-2449642:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2452451-2452699:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2452877-2453002:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2465071-2465174:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2466289-2466402:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2466890-2467824:1:exon

SAP130
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: SAP130
product: Sin3A associated protein 130, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739880.1
SIO_010081: SAP130
subclass of: SO_0000673
so part of: SAP130
location: join(2385264..2385471,2386269..2386386,2395947..2396182,2398218..2398329,2399580..2399704,2401317..2401441,2413066..2413213,2413366..2413456,2413654..2413758,2418407..2418548,2421471..2421592,2426659..2426961,2427652..2427829,2435125..2435229,2449284..2449642,2452451..2452699,2452877..2453002,2465071..2465174,2466289..2466402,2466890..2467824)
location: region:2385264-2467824:1
so has part: feature:2385264-2385471:1:exon
so has part: feature:2386269-2386386:1:exon
so has part: feature:2395947-2396182:1:exon
so has part: feature:2398218-2398329:1:exon
so has part: feature:2399580-2399704:1:exon
so has part: feature:2401317-2401441:1:exon
so has part: feature:2413066-2413213:1:exon
so has part: feature:2413366-2413456:1:exon
so has part: feature:2413654-2413758:1:exon
so has part: feature:2418407-2418548:1:exon
so has part: feature:2421471-2421592:1:exon
so has part: feature:2426659-2426961:1:exon
so has part: feature:2427652-2427829:1:exon
so has part: feature:2435125-2435229:1:exon
so has part: feature:2449284-2449642:1:exon
so has part: feature:2452451-2452699:1:exon
so has part: feature:2452877-2453002:1:exon
so has part: feature:2465071-2465174:1:exon
so has part: feature:2466289-2466402:1:exon
so has part: feature:2466890-2467824:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2385264-2385471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2386269-2386386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2395947-2396182:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2398218-2398329:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2399580-2399704:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2401317-2401441:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2413066-2413213:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2413366-2413456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2413654-2413758:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2418407-2418548:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2421471-2421592:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2426659-2426961:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2427652-2427829:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2435125-2435229:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2449284-2449642:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2452451-2452699:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2452877-2453002:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2465071-2465174:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2466289-2466402:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2466890-2467824:1:exon

SAP130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: SAP130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase complex subunit SAP130 isoform X1
translation: MGPPRHPQPGEVEAGGAGGGRWLQVEMSSQQFPRLGTPSTGLSQAPSQIANSGSAGLINPAATVNDESSREAEVTAREHMGSSSSLQSREEKQEPVVVRPYPQVQMLSTHHAVASGTPVTVTAPPAHLTPAVPLSFSEGLMKPPPKPTMPSRPIAPAPPSTLSLPPKVPGQVTVTMESSIPQASAIPVATISGQQGHPSNLHHIMTTNVQMSIIRSNAPGPPLHIGASHLPRGAAAAAVMSSSKVTTVLRPTSQLPNAATAQPAVQHIIHQPIQSRPPVTTSNTIPPAVVATVSATRAQSPVITTTAAHATDSALSRPTLSIQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPKQQLHTMAQKTIFSTGTPVAAATVAPILATNTIPSATTAGSVSHTQAPTSTIVTMTMPSHSSHATAVTTSNIPVAKVVPQQITHTSPRIQPDYPAERSSLIPISGHRASPNPVAMETRSDNRPSVPVQFQYFLPTYPPSAYPLAAHTYTPITSSVSTIRQYPVSAQAPNSAITAQTGVGVASTVHLNPMQLMTVDASHARHIQGIQPAPISTQGIQPAPIGTPGIQPAPMGTQGIHSATPISTQGLQPAPMGTQQPQPEGKTSAVVLADGATIVANPISNPFSAAPAPTTVVPTHSQSAGSSTPAQGSSPRPSILRKKPATDGMAVRKTLIPPQPPEVASPRVESSMRSTSGSPRPAGAKPKSEIHVSMATPVTVSMETVSSQNNDQPTIAVPPTAQQPPSTIPTMIAAASPPSQPAVALSTIPGAVPVTPPVTTIATAPPPSAAVAGSLSSVLGPPVPEIKVKEEVEPMDIMRPVSAVPPLATSTVSPSLALLANNLSMPTSDLPPGASPRKKPRKQQHVISTEEGDMMETNSTDDEKSTAKSLLVKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKAMLQEIANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTNLQEGIIPKKKAATDDDLHRINELIQGNMQRCKLVMDQISEARDSMLKVLDHKDRVLKLLNKNGTVKKVSKLKRKEKV
SIO_010081: SAP130
subclass of: SO_0000673
so part of: SAP130
location: join(2385400..2385471,2386269..2386386,2395947..2396182,2396902..2397060,2398218..2398329,2399580..2399704,2401317..2401441,2413066..2413213,2413366..2413456,2413654..2413758,2418407..2418548,2421471..2421592,2426659..2426961,2427652..2427829,2435125..2435229,2449284..2449642,2452451..2452699,2452877..2453002,2465071..2465174,2466289..2466402,2466890..2467048)
location: region:2385400-2467048:1
so has part: feature:2385400-2385471:1:exon
so has part: feature:2386269-2386386:1:exon
so has part: feature:2395947-2396182:1:exon
so has part: feature:2396902-2397060:1:exon
so has part: feature:2398218-2398329:1:exon
so has part: feature:2399580-2399704:1:exon
so has part: feature:2401317-2401441:1:exon
so has part: feature:2413066-2413213:1:exon
so has part: feature:2413366-2413456:1:exon
so has part: feature:2413654-2413758:1:exon
so has part: feature:2418407-2418548:1:exon
so has part: feature:2421471-2421592:1:exon
so has part: feature:2426659-2426961:1:exon
so has part: feature:2427652-2427829:1:exon
so has part: feature:2435125-2435229:1:exon
so has part: feature:2449284-2449642:1:exon
so has part: feature:2452451-2452699:1:exon
so has part: feature:2452877-2453002:1:exon
so has part: feature:2465071-2465174:1:exon
so has part: feature:2466289-2466402:1:exon
so has part: feature:2466890-2467048:1:exon

XP_041595811.1
type: Protein
SIO_000068: ncbiprotein

position:2385400:1
position: 2385400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2467048:1
position: 2467048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2385400-2385471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2386269-2386386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2395947-2396182:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2396902-2397060:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2398218-2398329:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2399580-2399704:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2401317-2401441:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2413066-2413213:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2413366-2413456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2413654-2413758:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2418407-2418548:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2421471-2421592:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2426659-2426961:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2427652-2427829:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2435125-2435229:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2449284-2449642:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2452451-2452699:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2452877-2453002:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2465071-2465174:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2466289-2466402:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2466890-2467048:1:exon

SAP130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: SAP130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase complex subunit SAP130 isoform X3
translation: MGPPRHPQPGEVEAGGAGGGRWLQVEMSSQQFPRLGTPSTGLSQAPSQIANSGSAGLINPAATVNDESSREAEVTAREHMGSSSSLQSREEKQEPVVVRPYPQVQMLSTHHAVASGTPVTVTAPPAHLTPAVPLSFSEGLMKPPPKPTMPSRPIAPAPPSTLSLPPKVPGQVTVTMESSIPQASAIPVATISGQQGHPSNLHHIMTTNVQMSIIRSNAPGPPLHIGASHLPRGAAAAAVMSSSKVTTVLRPTSQLPNAATAQPAVQHIIHQPIQSRPPVTTSNTIPPAVVATVSATRAQSPVITTTAAHATDSALSRPTLSIQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPKQQLHTMAQKTIFSTGTPVAAATVAPILATNTIPSATTAGSVSHTQAPTSTIVTMTMPSHSSHATAVTTSNIPVAKVVPQQITHTSPRIQPDYPAERSSLIPISGHRASPNPVAMETRSDNRPSVPVQFQYFLPTYPPSAYPLAAHTYTPITSSVSTIRQYPVSAQAPNSAITAQTGVGVASTVHLNPMQLMTVDASHARHIQGIQPAPISTQGIQPAPIGTPGIQPAPMGTQGIHSATPISTQGLQPAPMGTQQPQPEGKTSAVVLADGATIVANPISNPFSAAPAPTTVVPTHSQSAGSSTPAQGSSPRPSILRKKPATDGAKPKSEIHVSMATPVTVSMETVSSQNNDQPTIAVPPTAQQPPSTIPTMIAAASPPSQPAVALSTIPGAVPVTPPVTTIATAPPPSAAVAGSLSSVLGPPVPEIKVKEEVEPMDIMRPVSAVPPLATSTVSPSLALLANNLSMPTSDLPPGASPRKKPRKQQHVISTEEGDMMETNSTDDEKSTAKSLLVKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKAMLQEIANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTNLQEGIIPKKKAATDDDLHRINELIQGNMQRCKLVMDQISEARDSMLKVLDHKDRVLKLLNKNGTVKKVSKLKRKEKV
SIO_010081: SAP130
subclass of: SO_0000673
so part of: SAP130
location: join(2385400..2385471,2386269..2386386,2395947..2396182,2396902..2397060,2398218..2398329,2399580..2399704,2401317..2401441,2413066..2413213,2413366..2413456,2413654..2413758,2418407..2418548,2421471..2421592,2426659..2426961,2427652..2427829,2449284..2449642,2452451..2452699,2452877..2453002,2465071..2465174,2466289..2466402,2466890..2467048)
location: region:2385400-2467048:1
so has part: feature:2385400-2385471:1:exon
so has part: feature:2386269-2386386:1:exon
so has part: feature:2395947-2396182:1:exon
so has part: feature:2396902-2397060:1:exon
so has part: feature:2398218-2398329:1:exon
so has part: feature:2399580-2399704:1:exon
so has part: feature:2401317-2401441:1:exon
so has part: feature:2413066-2413213:1:exon
so has part: feature:2413366-2413456:1:exon
so has part: feature:2413654-2413758:1:exon
so has part: feature:2418407-2418548:1:exon
so has part: feature:2421471-2421592:1:exon
so has part: feature:2426659-2426961:1:exon
so has part: feature:2427652-2427829:1:exon
so has part: feature:2449284-2449642:1:exon
so has part: feature:2452451-2452699:1:exon
so has part: feature:2452877-2453002:1:exon
so has part: feature:2465071-2465174:1:exon
so has part: feature:2466289-2466402:1:exon
so has part: feature:2466890-2467048:1:exon

XP_041595813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2385400-2385471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2386269-2386386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2395947-2396182:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2396902-2397060:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2398218-2398329:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2399580-2399704:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2401317-2401441:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2413066-2413213:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2413366-2413456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2413654-2413758:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2418407-2418548:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2421471-2421592:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2426659-2426961:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2427652-2427829:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2449284-2449642:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2452451-2452699:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2452877-2453002:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2465071-2465174:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2466289-2466402:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2466890-2467048:1:exon

SAP130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: SAP130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase complex subunit SAP130 isoform X4
translation: MGPPRHPQPGEVEAGGAGGGRWLQVEMSSQQFPRLGTPSTGLSQAPSQIANSGSAGLINPAATVNDESSREAEVTAREHMGSSSSLQSREEKQEPVVVRPYPQVQMLSTHHAVASGTPVTVTAPPAHLTPAVPLSFSEGLMKGHPSNLHHIMTTNVQMSIIRSNAPGPPLHIGASHLPRGAAAAAVMSSSKVTTVLRPTSQLPNAATAQPAVQHIIHQPIQSRPPVTTSNTIPPAVVATVSATRAQSPVITTTAAHATDSALSRPTLSIQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPKQQLHTMAQKTIFSTGTPVAAATVAPILATNTIPSATTAGSVSHTQAPTSTIVTMTMPSHSSHATAVTTSNIPVAKVVPQQITHTSPRIQPDYPAERSSLIPISGHRASPNPVAMETRSDNRPSVPVQFQYFLPTYPPSAYPLAAHTYTPITSSVSTIRQYPVSAQAPNSAITAQTGVGVASTVHLNPMQLMTVDASHARHIQGIQPAPISTQGIQPAPIGTPGIQPAPMGTQGIHSATPISTQGLQPAPMGTQQPQPEGKTSAVVLADGATIVANPISNPFSAAPAPTTVVPTHSQSAGSSTPAQGSSPRPSILRKKPATDGMAVRKTLIPPQPPEVASPRVESSMRSTSGSPRPAGAKPKSEIHVSMATPVTVSMETVSSQNNDQPTIAVPPTAQQPPSTIPTMIAAASPPSQPAVALSTIPGAVPVTPPVTTIATAPPPSAAVAGSLSSVLGPPVPEIKVKEEVEPMDIMRPVSAVPPLATSTVSPSLALLANNLSMPTSDLPPGASPRKKPRKQQHVISTEEGDMMETNSTDDEKSTAKSLLVKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKAMLQEIANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTNLQEGIIPKKKAATDDDLHRINELIQGNMQRCKLVMDQISEARDSMLKVLDHKDRVLKLLNKNGTVKKVSKLKRKEKV
SIO_010081: SAP130
subclass of: SO_0000673
so part of: SAP130
location: join(2385400..2385471,2386269..2386386,2395947..2396182,2398218..2398329,2399580..2399704,2401317..2401441,2413066..2413213,2413366..2413456,2413654..2413758,2418407..2418548,2421471..2421592,2426659..2426961,2427652..2427829,2435125..2435229,2449284..2449642,2452451..2452699,2452877..2453002,2465071..2465174,2466289..2466402,2466890..2467048)
location: region:2385400-2467048:1
so has part: feature:2385400-2385471:1:exon
so has part: feature:2386269-2386386:1:exon
so has part: feature:2395947-2396182:1:exon
so has part: feature:2398218-2398329:1:exon
so has part: feature:2399580-2399704:1:exon
so has part: feature:2401317-2401441:1:exon
so has part: feature:2413066-2413213:1:exon
so has part: feature:2413366-2413456:1:exon
so has part: feature:2413654-2413758:1:exon
so has part: feature:2418407-2418548:1:exon
so has part: feature:2421471-2421592:1:exon
so has part: feature:2426659-2426961:1:exon
so has part: feature:2427652-2427829:1:exon
so has part: feature:2435125-2435229:1:exon
so has part: feature:2449284-2449642:1:exon
so has part: feature:2452451-2452699:1:exon
so has part: feature:2452877-2453002:1:exon
so has part: feature:2465071-2465174:1:exon
so has part: feature:2466289-2466402:1:exon
so has part: feature:2466890-2467048:1:exon

XP_041595814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2385400-2385471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2386269-2386386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2395947-2396182:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2398218-2398329:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2399580-2399704:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2401317-2401441:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2413066-2413213:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2413366-2413456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2413654-2413758:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2418407-2418548:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2421471-2421592:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2426659-2426961:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2427652-2427829:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2435125-2435229:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2449284-2449642:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2452451-2452699:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2452877-2453002:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2465071-2465174:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2466289-2466402:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2466890-2467048:1:exon

SAP130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: SAP130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase complex subunit SAP130 isoform X2
translation: MSSQQFPRLGTPSTGLSQAPSQIANSGSAGLINPAATVNDESSREAEVTAREHMGSSSSLQSREEKQEPVVVRPYPQVQMLSTHHAVASGTPVTVTAPPAHLTPAVPLSFSEGLMKPPPKPTMPSRPIAPAPPSTLSLPPKVPGQVTVTMESSIPQASAIPVATISGQQGHPSNLHHIMTTNVQMSIIRSNAPGPPLHIGASHLPRGAAAAAVMSSSKVTTVLRPTSQLPNAATAQPAVQHIIHQPIQSRPPVTTSNTIPPAVVATVSATRAQSPVITTTAAHATDSALSRPTLSIQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPKQQLHTMAQKTIFSTGTPVAAATVAPILATNTIPSATTAGSVSHTQAPTSTIVTMTMPSHSSHATAVTTSNIPVAKVVPQQITHTSPRIQPDYPAERSSLIPISGHRASPNPVAMETRSDNRPSVPVQFQYFLPTYPPSAYPLAAHTYTPITSSVSTIRQYPVSAQAPNSAITAQTGVGVASTVHLNPMQLMTVDASHARHIQGIQPAPISTQGIQPAPIGTPGIQPAPMGTQGIHSATPISTQGLQPAPMGTQQPQPEGKTSAVVLADGATIVANPISNPFSAAPAPTTVVPTHSQSAGSSTPAQGSSPRPSILRKKPATDGMAVRKTLIPPQPPEVASPRVESSMRSTSGSPRPAGAKPKSEIHVSMATPVTVSMETVSSQNNDQPTIAVPPTAQQPPSTIPTMIAAASPPSQPAVALSTIPGAVPVTPPVTTIATAPPPSAAVAGSLSSVLGPPVPEIKVKEEVEPMDIMRPVSAVPPLATSTVSPSLALLANNLSMPTSDLPPGASPRKKPRKQQHVISTEEGDMMETNSTDDEKSTAKSLLVKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKAMLQEIANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTNLQEGIIPKKKAATDDDLHRINELIQGNMQRCKLVMDQISEARDSMLKVLDHKDRVLKLLNKNGTVKKVSKLKRKEKV
SIO_010081: SAP130
subclass of: SO_0000673
so part of: SAP130
location: join(2386275..2386386,2395947..2396182,2396902..2397060,2398218..2398329,2399580..2399704,2401317..2401441,2413066..2413213,2413366..2413456,2413654..2413758,2418407..2418548,2421471..2421592,2426659..2426961,2427652..2427829,2435125..2435229,2449284..2449642,2452451..2452699,2452877..2453002,2465071..2465174,2466289..2466402,2466890..2467048)
location: region:2386275-2467048:1
so has part: feature:2386275-2386386:1:exon
so has part: feature:2395947-2396182:1:exon
so has part: feature:2396902-2397060:1:exon
so has part: feature:2398218-2398329:1:exon
so has part: feature:2399580-2399704:1:exon
so has part: feature:2401317-2401441:1:exon
so has part: feature:2413066-2413213:1:exon
so has part: feature:2413366-2413456:1:exon
so has part: feature:2413654-2413758:1:exon
so has part: feature:2418407-2418548:1:exon
so has part: feature:2421471-2421592:1:exon
so has part: feature:2426659-2426961:1:exon
so has part: feature:2427652-2427829:1:exon
so has part: feature:2435125-2435229:1:exon
so has part: feature:2449284-2449642:1:exon
so has part: feature:2452451-2452699:1:exon
so has part: feature:2452877-2453002:1:exon
so has part: feature:2465071-2465174:1:exon
so has part: feature:2466289-2466402:1:exon
so has part: feature:2466890-2467048:1:exon

XP_041595812.1
type: Protein
SIO_000068: ncbiprotein

position:2386275:1
position: 2386275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2386275-2386386:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2395947-2396182:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2396902-2397060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2398218-2398329:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2399580-2399704:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2401317-2401441:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2413066-2413213:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2413366-2413456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2413654-2413758:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2418407-2418548:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2421471-2421592:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2426659-2426961:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2427652-2427829:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2435125-2435229:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2449284-2449642:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2452451-2452699:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2452877-2453002:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2465071-2465174:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2466289-2466402:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2466890-2467048:1:exon

LOC121482214
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482214
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2441860..2442013)
location: region:2441860-2442013:-1
so has part: feature:2441860-2442013:-1:exon
subclass of: SO_0000578

121482214
type: Gene
SIO_000068: ncbigene

position:2441860:-1
position: 2441860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2442013:-1
position: 2442013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2441860-2442013:-1:exon

LOC121482214
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: snoRNA
gene: LOC121482214
product: small nucleolar RNA SNORA62/SNORA6 family
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00091
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005985564.1
SIO_010081: LOC121482214
subclass of: SO_0000673
so part of: LOC121482214
location: complement(2441860..2442013)
location: region:2441860-2442013:-1
so has part: feature:2441860-2442013:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2441860-2442013:-1:exon

LOC121481919
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121481919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2476780..2478109)
location: region:2476780-2478109:-1
so has part: feature:2476780-2478109:-1:exon

121481919
type: Gene
SIO_000068: ncbigene

position:2476780:-1
position: 2476780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2478109:-1
position: 2478109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2476780-2478109:-1:exon

LOC121481919
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121481919
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 71% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121481919
subclass of: SO_0000673
so part of: LOC121481919
location: complement(2476780..2478109)
location: region:2476780-2478109:-1
so has part: feature:2476780-2478109:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2476780-2478109:-1:exon

LOC121481922
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121481922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2481606..2492818)
location: region:2481606-2492818:-1
so has part: feature:2481606-2492818:-1:exon
subclass of: SO_0000011

121481922
type: Gene
SIO_000068: ncbigene

position:2481606:-1
position: 2481606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2492818:-1
position: 2492818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2481606-2492818:-1:exon

LOC121481922
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: lncRNA
gene: LOC121481922
product: uncharacterized LOC121481922
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005985445.1
SIO_010081: LOC121481922
subclass of: SO_0000673
so part of: LOC121481922
location: complement(join(2481606..2481967,2486021..2486126,2492779..2492818))
location: region:2481606-2492818:-1
so has part: feature:2492779-2492818:-1:exon
so has part: feature:2486021-2486126:-1:exon
so has part: feature:2481606-2481967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2492779-2492818:-1:exon

position:2492779:-1
position: 2492779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2486021-2486126:-1:exon

position:2486021:-1
position: 2486021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2486126:-1
position: 2486126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2481606-2481967:-1:exon

position:2481967:-1
position: 2481967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121481921
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121481921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2501637..2518811)
location: region:2501637-2518811:-1
so has part: feature:2501637-2518811:-1:exon
subclass of: SO_0000011

121481921
type: Gene
SIO_000068: ncbigene

position:2501637:-1
position: 2501637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2518811:-1
position: 2518811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2501637-2518811:-1:exon

LOC121481921
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: lncRNA
gene: LOC121481921
product: uncharacterized LOC121481921
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005985444.1
SIO_010081: LOC121481921
subclass of: SO_0000673
so part of: LOC121481921
location: complement(join(2501637..2501708,2502320..2502441,2518410..2518811))
location: region:2501637-2518811:-1
so has part: feature:2518410-2518811:-1:exon
so has part: feature:2502320-2502441:-1:exon
so has part: feature:2501637-2501708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2518410-2518811:-1:exon

position:2518410:-1
position: 2518410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2502320-2502441:-1:exon

position:2502320:-1
position: 2502320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2502441:-1
position: 2502441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2501637-2501708:-1:exon

position:2501708:-1
position: 2501708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AMMECR1L
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: AMMECR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2510356..2542260
location: region:2510356-2542260:1
so has part: feature:2510356-2542260:1:exon
subclass of: SO_0000010

121481920
type: Gene
SIO_000068: ncbigene

position:2510356:1
position: 2510356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2542260:1
position: 2542260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2510356-2542260:1:exon

AMMECR1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: AMMECR1L
product: AMMECR1 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739551.1
SIO_010081: AMMECR1L
subclass of: SO_0000673
so part of: AMMECR1L
location: join(2510356..2510389,2520781..2520890,2529869..2530313,2533634..2533744,2534051..2534165,2534803..2534893,2536857..2536953,2538647..2542260)
location: region:2510356-2542260:1
so has part: feature:2510356-2510389:1:exon
so has part: feature:2520781-2520890:1:exon
so has part: feature:2529869-2530313:1:exon
so has part: feature:2533634-2533744:1:exon
so has part: feature:2534051-2534165:1:exon
so has part: feature:2534803-2534893:1:exon
so has part: feature:2536857-2536953:1:exon
so has part: feature:2538647-2542260:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2510356-2510389:1:exon

position:2510389:1
position: 2510389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2520781-2520890:1:exon

position:2520781:1
position: 2520781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2520890:1
position: 2520890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2529869-2530313:1:exon

position:2529869:1
position: 2529869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2530313:1
position: 2530313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2533634-2533744:1:exon

position:2533634:1
position: 2533634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2533744:1
position: 2533744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2534051-2534165:1:exon

position:2534051:1
position: 2534051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2534165:1
position: 2534165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2534803-2534893:1:exon

position:2534803:1
position: 2534803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2534893:1
position: 2534893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2536857-2536953:1:exon

position:2536857:1
position: 2536857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2536953:1
position: 2536953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2538647-2542260:1:exon

position:2538647:1
position: 2538647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AMMECR1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: AMMECR1L
product: AMMECR1 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739549.1
SIO_010081: AMMECR1L
subclass of: SO_0000673
so part of: AMMECR1L
location: join(2518980..2519305,2520781..2520890,2529869..2530313,2533634..2533744,2534051..2534165,2534803..2534893,2536857..2536953,2538647..2542260)
location: region:2518980-2542260:1
so has part: feature:2518980-2519305:1:exon
so has part: feature:2520781-2520890:1:exon
so has part: feature:2529869-2530313:1:exon
so has part: feature:2533634-2533744:1:exon
so has part: feature:2534051-2534165:1:exon
so has part: feature:2534803-2534893:1:exon
so has part: feature:2536857-2536953:1:exon
so has part: feature:2538647-2542260:1:exon

position:2518980:1
position: 2518980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2518980-2519305:1:exon

position:2519305:1
position: 2519305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2520781-2520890:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2529869-2530313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2533634-2533744:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2534051-2534165:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2534803-2534893:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2536857-2536953:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2538647-2542260:1:exon

AMMECR1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: AMMECR1L
product: AMMECR1 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739550.1
SIO_010081: AMMECR1L
subclass of: SO_0000673
so part of: AMMECR1L
location: join(2519587..2519669,2520781..2520890,2529869..2530313,2533634..2533744,2534051..2534165,2534803..2534893,2536857..2536953,2538647..2542260)
location: region:2519587-2542260:1
so has part: feature:2519587-2519669:1:exon
so has part: feature:2520781-2520890:1:exon
so has part: feature:2529869-2530313:1:exon
so has part: feature:2533634-2533744:1:exon
so has part: feature:2534051-2534165:1:exon
so has part: feature:2534803-2534893:1:exon
so has part: feature:2536857-2536953:1:exon
so has part: feature:2538647-2542260:1:exon

position:2519587:1
position: 2519587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2519587-2519669:1:exon

position:2519669:1
position: 2519669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2520781-2520890:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2529869-2530313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2533634-2533744:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2534051-2534165:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2534803-2534893:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2536857-2536953:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2538647-2542260:1:exon

AMMECR1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: AMMECR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMMECR1-like protein
translation: MGKRRCVPPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDGSSGRENVSDLTLGPGNSPITRMNPASGALSPLPRPNGTANTTKNLVVTAEMCCYCFDVLYCHLYGFPQPRLPRFTNDPYPLFVTWKTGRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHGIRIEFINEKGVKRTATYLPEVAKEQDWDQIQTIDSLLRKGGFKAPITSEFRKTIKLTRYRSEKVTISYAEYIASRQHCFQNGTLHAPPLYNHYS
SIO_010081: AMMECR1L
subclass of: SO_0000673
so part of: AMMECR1L
location: join(2529907..2530313,2533634..2533744,2534051..2534165,2534803..2534893,2536857..2536953,2538647..2538758)
location: region:2529907-2538758:1
so has part: feature:2529907-2530313:1:exon
so has part: feature:2533634-2533744:1:exon
so has part: feature:2534051-2534165:1:exon
so has part: feature:2534803-2534893:1:exon
so has part: feature:2536857-2536953:1:exon
so has part: feature:2538647-2538758:1:exon

XP_041595483.1
type: Protein
SIO_000068: ncbiprotein

position:2529907:1
position: 2529907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2538758:1
position: 2538758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2529907-2530313:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2533634-2533744:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2534051-2534165:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2534803-2534893:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2536857-2536953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2538647-2538758:1:exon

AMMECR1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: AMMECR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMMECR1-like protein
translation: MGKRRCVPPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDGSSGRENVSDLTLGPGNSPITRMNPASGALSPLPRPNGTANTTKNLVVTAEMCCYCFDVLYCHLYGFPQPRLPRFTNDPYPLFVTWKTGRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHGIRIEFINEKGVKRTATYLPEVAKEQDWDQIQTIDSLLRKGGFKAPITSEFRKTIKLTRYRSEKVTISYAEYIASRQHCFQNGTLHAPPLYNHYS
SIO_010081: AMMECR1L
subclass of: SO_0000673
so part of: AMMECR1L
location: join(2529907..2530313,2533634..2533744,2534051..2534165,2534803..2534893,2536857..2536953,2538647..2538758)
location: region:2529907-2538758:1
so has part: feature:2529907-2530313:1:exon
so has part: feature:2533634-2533744:1:exon
so has part: feature:2534051-2534165:1:exon
so has part: feature:2534803-2534893:1:exon
so has part: feature:2536857-2536953:1:exon
so has part: feature:2538647-2538758:1:exon

XP_041595484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2529907-2530313:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2533634-2533744:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2534051-2534165:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2534803-2534893:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2536857-2536953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2538647-2538758:1:exon

AMMECR1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: AMMECR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMMECR1-like protein
translation: MGKRRCVPPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDGSSGRENVSDLTLGPGNSPITRMNPASGALSPLPRPNGTANTTKNLVVTAEMCCYCFDVLYCHLYGFPQPRLPRFTNDPYPLFVTWKTGRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHGIRIEFINEKGVKRTATYLPEVAKEQDWDQIQTIDSLLRKGGFKAPITSEFRKTIKLTRYRSEKVTISYAEYIASRQHCFQNGTLHAPPLYNHYS
SIO_010081: AMMECR1L
subclass of: SO_0000673
so part of: AMMECR1L
location: join(2529907..2530313,2533634..2533744,2534051..2534165,2534803..2534893,2536857..2536953,2538647..2538758)
location: region:2529907-2538758:1
so has part: feature:2529907-2530313:1:exon
so has part: feature:2533634-2533744:1:exon
so has part: feature:2534051-2534165:1:exon
so has part: feature:2534803-2534893:1:exon
so has part: feature:2536857-2536953:1:exon
so has part: feature:2538647-2538758:1:exon

XP_041595485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2529907-2530313:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2533634-2533744:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2534051-2534165:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2534803-2534893:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2536857-2536953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2538647-2538758:1:exon

POLR2D
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: POLR2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2548926..2563874
location: region:2548926-2563874:1
so has part: feature:2548926-2563874:1:exon
subclass of: SO_0000010

121482086
type: Gene
SIO_000068: ncbigene

position:2548926:1
position: 2548926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2563874:1
position: 2563874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2548926-2563874:1:exon

POLR2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: POLR2D
product: RNA polymerase II subunit D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739930.1
SIO_010081: POLR2D
subclass of: SO_0000673
so part of: POLR2D
location: join(2548926..2549045,2556412..2556592,2562454..2562549,2563493..2563874)
location: region:2548926-2563874:1
so has part: feature:2548926-2549045:1:exon
so has part: feature:2556412-2556592:1:exon
so has part: feature:2562454-2562549:1:exon
so has part: feature:2563493-2563874:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2548926-2549045:1:exon

position:2549045:1
position: 2549045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2556412-2556592:1:exon

position:2556412:1
position: 2556412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2556592:1
position: 2556592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2562454-2562549:1:exon

position:2562454:1
position: 2562454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2562549:1
position: 2562549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2563493-2563874:1:exon

position:2563493:1
position: 2563493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POLR2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: POLR2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase II subunit RPB4
translation: MAAGGSDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEVFMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEGRFEDEELQQILDDIQTKRSFQY
SIO_010081: POLR2D
subclass of: SO_0000673
so part of: POLR2D
location: join(2548973..2549045,2556412..2556592,2562454..2562549,2563493..2563571)
location: region:2548973-2563571:1
so has part: feature:2548973-2549045:1:exon
so has part: feature:2556412-2556592:1:exon
so has part: feature:2562454-2562549:1:exon
so has part: feature:2563493-2563571:1:exon

XP_041595864.1
type: Protein
SIO_000068: ncbiprotein

position:2548973:1
position: 2548973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2563571:1
position: 2563571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2548973-2549045:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2556412-2556592:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2562454-2562549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2563493-2563571:1:exon

WDR33
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: WDR33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2585466..2702643
location: region:2585466-2702643:1
so has part: feature:2585466-2702643:1:exon
subclass of: SO_0000010

121482145
type: Gene
SIO_000068: ncbigene

position:2585466:1
position: 2585466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2702643:1
position: 2702643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585466-2702643:1:exon

WDR33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: WDR33
product: WD repeat domain 33, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739985.1
SIO_010081: WDR33
subclass of: SO_0000673
so part of: WDR33
location: join(2585466..2585596,2636142..2636368,2637913..2637981,2638584..2638688,2641251..2641346,2641528..2641679,2643388..2643485,2681409..2681535,2682684..2682838,2682933..2683011,2683668..2683778,2684321..2684415,2684630..2684716,2684930..2685069,2685658..2685810,2686696..2687784,2690526..2690634,2693704..2694142,2698332..2698495,2698613..2698705,2700048..2700263,2702011..2702643)
location: region:2585466-2702643:1
so has part: feature:2585466-2585596:1:exon
so has part: feature:2636142-2636368:1:exon
so has part: feature:2637913-2637981:1:exon
so has part: feature:2638584-2638688:1:exon
so has part: feature:2641251-2641346:1:exon
so has part: feature:2641528-2641679:1:exon
so has part: feature:2643388-2643485:1:exon
so has part: feature:2681409-2681535:1:exon
so has part: feature:2682684-2682838:1:exon
so has part: feature:2682933-2683011:1:exon
so has part: feature:2683668-2683778:1:exon
so has part: feature:2684321-2684415:1:exon
so has part: feature:2684630-2684716:1:exon
so has part: feature:2684930-2685069:1:exon
so has part: feature:2685658-2685810:1:exon
so has part: feature:2686696-2687784:1:exon
so has part: feature:2690526-2690634:1:exon
so has part: feature:2693704-2694142:1:exon
so has part: feature:2698332-2698495:1:exon
so has part: feature:2698613-2698705:1:exon
so has part: feature:2700048-2700263:1:exon
so has part: feature:2702011-2702643:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2585466-2585596:1:exon

position:2585596:1
position: 2585596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2636142-2636368:1:exon

position:2636142:1
position: 2636142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2636368:1
position: 2636368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2637913-2637981:1:exon

position:2637913:1
position: 2637913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2637981:1
position: 2637981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2638584-2638688:1:exon

position:2638584:1
position: 2638584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2638688:1
position: 2638688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2641251-2641346:1:exon

position:2641251:1
position: 2641251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2641346:1
position: 2641346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2641528-2641679:1:exon

position:2641528:1
position: 2641528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2641679:1
position: 2641679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2643388-2643485:1:exon

position:2643388:1
position: 2643388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2643485:1
position: 2643485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2681409-2681535:1:exon

position:2681409:1
position: 2681409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2681535:1
position: 2681535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2682684-2682838:1:exon

position:2682684:1
position: 2682684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2682838:1
position: 2682838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2682933-2683011:1:exon

position:2682933:1
position: 2682933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2683011:1
position: 2683011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2683668-2683778:1:exon

position:2683668:1
position: 2683668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2683778:1
position: 2683778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2684321-2684415:1:exon

position:2684321:1
position: 2684321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2684415:1
position: 2684415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2684630-2684716:1:exon

position:2684630:1
position: 2684630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2684716:1
position: 2684716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2684930-2685069:1:exon

position:2684930:1
position: 2684930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2685069:1
position: 2685069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2685658-2685810:1:exon

position:2685658:1
position: 2685658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2685810:1
position: 2685810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2686696-2687784:1:exon

position:2686696:1
position: 2686696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2687784:1
position: 2687784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2690526-2690634:1:exon

position:2690526:1
position: 2690526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2690634:1
position: 2690634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2693704-2694142:1:exon

position:2693704:1
position: 2693704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2694142:1
position: 2694142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2698332-2698495:1:exon

position:2698332:1
position: 2698332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2698495:1
position: 2698495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2698613-2698705:1:exon

position:2698613:1
position: 2698613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2698705:1
position: 2698705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2700048-2700263:1:exon

position:2700048:1
position: 2700048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2700263:1
position: 2700263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2702011-2702643:1:exon

position:2702011:1
position: 2702011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDR33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: WDR33
product: WD repeat domain 33, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041739986.1
SIO_010081: WDR33
subclass of: SO_0000673
so part of: WDR33
location: join(2585466..2585596,2636142..2636368,2637913..2637981,2638584..2638688,2641251..2641346,2641528..2641679,2643388..2643485,2681409..2681535,2682684..2682838,2682933..2683011,2683668..2683778,2684321..2684415,2684630..2684716,2684930..2685069,2685658..2685810,2686696..2687784,2690526..2690634,2691903..2692011,2693704..2693835)
location: region:2585466-2693835:1
so has part: feature:2585466-2585596:1:exon
so has part: feature:2636142-2636368:1:exon
so has part: feature:2637913-2637981:1:exon
so has part: feature:2638584-2638688:1:exon
so has part: feature:2641251-2641346:1:exon
so has part: feature:2641528-2641679:1:exon
so has part: feature:2643388-2643485:1:exon
so has part: feature:2681409-2681535:1:exon
so has part: feature:2682684-2682838:1:exon
so has part: feature:2682933-2683011:1:exon
so has part: feature:2683668-2683778:1:exon
so has part: feature:2684321-2684415:1:exon
so has part: feature:2684630-2684716:1:exon
so has part: feature:2684930-2685069:1:exon
so has part: feature:2685658-2685810:1:exon
so has part: feature:2686696-2687784:1:exon
so has part: feature:2690526-2690634:1:exon
so has part: feature:2691903-2692011:1:exon
so has part: feature:2693704-2693835:1:exon

position:2693835:1
position: 2693835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585466-2585596:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2636142-2636368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2637913-2637981:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2638584-2638688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641251-2641346:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2641528-2641679:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2643388-2643485:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2681409-2681535:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2682684-2682838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2682933-2683011:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2683668-2683778:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2684321-2684415:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2684630-2684716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2684930-2685069:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2685658-2685810:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2686696-2687784:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2690526-2690634:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2691903-2692011:1:exon

position:2691903:1
position: 2691903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2692011:1
position: 2692011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2693704-2693835:1:exon

WDR33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: WDR33
product: WD repeat domain 33, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041739988.1
SIO_010081: WDR33
subclass of: SO_0000673
so part of: WDR33
location: join(2585466..2585596,2636142..2636368,2637913..2637981,2638584..2638688,2641251..2641346,2641528..2641679,2643388..2643485,2674145..2674691)
location: region:2585466-2674691:1
so has part: feature:2585466-2585596:1:exon
so has part: feature:2636142-2636368:1:exon
so has part: feature:2637913-2637981:1:exon
so has part: feature:2638584-2638688:1:exon
so has part: feature:2641251-2641346:1:exon
so has part: feature:2641528-2641679:1:exon
so has part: feature:2643388-2643485:1:exon
so has part: feature:2674145-2674691:1:exon

position:2674691:1
position: 2674691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585466-2585596:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2636142-2636368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2637913-2637981:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2638584-2638688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641251-2641346:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2641528-2641679:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2643388-2643485:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2674145-2674691:1:exon

position:2674145:1
position: 2674145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDR33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: WDR33
product: WD repeat domain 33, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739991.1
SIO_010081: WDR33
subclass of: SO_0000673
so part of: WDR33
location: join(2585466..2585596,2636142..2636368,2637913..2637981,2638584..2638688,2641251..2641346,2641528..2641679,2643388..2643485,2655834..2655859)
location: region:2585466-2655859:1
so has part: feature:2585466-2585596:1:exon
so has part: feature:2636142-2636368:1:exon
so has part: feature:2637913-2637981:1:exon
so has part: feature:2638584-2638688:1:exon
so has part: feature:2641251-2641346:1:exon
so has part: feature:2641528-2641679:1:exon
so has part: feature:2643388-2643485:1:exon
so has part: feature:2655834-2655859:1:exon

position:2655859:1
position: 2655859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585466-2585596:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2636142-2636368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2637913-2637981:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2638584-2638688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641251-2641346:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2641528-2641679:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2643388-2643485:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2655834-2655859:1:exon

position:2655834:1
position: 2655834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDR33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: WDR33
product: WD repeat domain 33, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041739989.1
SIO_010081: WDR33
subclass of: SO_0000673
so part of: WDR33
location: join(2585466..2585596,2636142..2636368,2637913..2637981,2638584..2638688,2641251..2641346,2641528..2641679,2643388..2643485,2650220..2650278)
location: region:2585466-2650278:1
so has part: feature:2585466-2585596:1:exon
so has part: feature:2636142-2636368:1:exon
so has part: feature:2637913-2637981:1:exon
so has part: feature:2638584-2638688:1:exon
so has part: feature:2641251-2641346:1:exon
so has part: feature:2641528-2641679:1:exon
so has part: feature:2643388-2643485:1:exon
so has part: feature:2650220-2650278:1:exon

position:2650278:1
position: 2650278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585466-2585596:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2636142-2636368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2637913-2637981:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2638584-2638688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641251-2641346:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2641528-2641679:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2643388-2643485:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2650220-2650278:1:exon

position:2650220:1
position: 2650220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121482212
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482212
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2600158..2600260)
location: region:2600158-2600260:-1
so has part: feature:2600158-2600260:-1:exon
subclass of: SO_0000623

121482212
type: Gene
SIO_000068: ncbigene

position:2600158:-1
position: 2600158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2600260:-1
position: 2600260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2600158-2600260:-1:exon

LOC121482212
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: snRNA
gene: LOC121482212
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005985562.1
SIO_010081: LOC121482212
subclass of: SO_0000673
so part of: LOC121482212
location: complement(2600158..2600260)
location: region:2600158-2600260:-1
so has part: feature:2600158-2600260:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2600158-2600260:-1:exon

LOC121482104
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2605591..2607444)
location: region:2605591-2607444:-1
so has part: feature:2605591-2607444:-1:exon

121482104
type: Gene
SIO_000068: ncbigene

position:2605591:-1
position: 2605591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2607444:-1
position: 2607444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2605591-2607444:-1:exon

LOC121482104
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121482104
subclass of: SO_0000673
so part of: LOC121482104
location: complement(2605591..2606222)
location: region:2605591-2606222:-1
so has part: feature:2605591-2606222:-1:exon

position:2606222:-1
position: 2606222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2605591-2606222:-1:exon

LOC121482104
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121482104
subclass of: SO_0000673
so part of: LOC121482104
location: complement(2607403..2607444)
location: region:2607403-2607444:-1
so has part: feature:2607403-2607444:-1:exon

position:2607403:-1
position: 2607403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2607403-2607444:-1:exon

LOC121482105
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482105
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2611119..2623200)
location: region:2611119-2623200:-1
so has part: feature:2611119-2623200:-1:exon

121482105
type: Gene
SIO_000068: ncbigene

position:2611119:-1
position: 2611119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2623200:-1
position: 2623200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2611119-2623200:-1:exon

LOC121482105
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482105
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121482105
subclass of: SO_0000673
so part of: LOC121482105
location: complement(2611119..2611750)
location: region:2611119-2611750:-1
so has part: feature:2611119-2611750:-1:exon

position:2611750:-1
position: 2611750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2611119-2611750:-1:exon

LOC121482105
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482105
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121482105
subclass of: SO_0000673
so part of: LOC121482105
location: complement(2614227..2614300)
location: region:2614227-2614300:-1
so has part: feature:2614227-2614300:-1:exon

position:2614227:-1
position: 2614227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2614300:-1
position: 2614300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2614227-2614300:-1:exon

LOC121482105
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482105
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121482105
subclass of: SO_0000673
so part of: LOC121482105
location: complement(2623116..2623200)
location: region:2623116-2623200:-1
so has part: feature:2623116-2623200:-1:exon

position:2623116:-1
position: 2623116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2623116-2623200:-1:exon

LOC121482106
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2624344..2624549)
location: region:2624344-2624549:-1
so has part: feature:2624344-2624549:-1:exon

121482106
type: Gene
SIO_000068: ncbigene

position:2624344:-1
position: 2624344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2624549:-1
position: 2624549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2624344-2624549:-1:exon

LOC121482106
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482106
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC121482106
subclass of: SO_0000673
so part of: LOC121482106
location: complement(2624344..2624549)
location: region:2624344-2624549:-1
so has part: feature:2624344-2624549:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2624344-2624549:-1:exon

WDR33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: WDR33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA 3' end processing protein WDR33 isoform X1
translation: MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAEIEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQGFQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLNPRGMQGPPGPRENQGPAPQGMMMGHPPQEMRGPHPPSGLLGHGPQEMRGPQEMRGMQGPPAQGSMLGPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPIPFQQQKTALLGDGPRAPFNQEGQNAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSRGPPNHHMGPMSERRHEQSSGPEHGPERGPFRGSQDCRGPPDRRGPHPDFPDDFSRPDDFHPDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFNEGDGRGAARGPPGAWEGRRPGDERFPRDPEDPRFRGRREESFRRGVPPRHEGRAPPRGRDGFPGPEDFGPEENFDPSDEAARGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPRPDHPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHRELEAPGGPSEDRGGKGRGGPGPSQRVPKSGRSSSLDGDHHDGYHRDEPFGGPPGSGTPSRGGRSGSNWGRGSTMNSGPPRRGASRGGGRGR
SIO_010081: WDR33
subclass of: SO_0000673
so part of: WDR33
location: join(2636165..2636368,2637913..2637981,2638584..2638688,2641251..2641346,2641528..2641679,2643388..2643485,2681409..2681535,2682684..2682838,2682933..2683011,2683668..2683778,2684321..2684415,2684630..2684716,2684930..2685069,2685658..2685810,2686696..2687784,2690526..2690634,2693704..2694142,2698332..2698495,2698613..2698705,2700048..2700263,2702011..2702240)
location: region:2636165-2702240:1
so has part: feature:2636165-2636368:1:exon
so has part: feature:2637913-2637981:1:exon
so has part: feature:2638584-2638688:1:exon
so has part: feature:2641251-2641346:1:exon
so has part: feature:2641528-2641679:1:exon
so has part: feature:2643388-2643485:1:exon
so has part: feature:2681409-2681535:1:exon
so has part: feature:2682684-2682838:1:exon
so has part: feature:2682933-2683011:1:exon
so has part: feature:2683668-2683778:1:exon
so has part: feature:2684321-2684415:1:exon
so has part: feature:2684630-2684716:1:exon
so has part: feature:2684930-2685069:1:exon
so has part: feature:2685658-2685810:1:exon
so has part: feature:2686696-2687784:1:exon
so has part: feature:2690526-2690634:1:exon
so has part: feature:2693704-2694142:1:exon
so has part: feature:2698332-2698495:1:exon
so has part: feature:2698613-2698705:1:exon
so has part: feature:2700048-2700263:1:exon
so has part: feature:2702011-2702240:1:exon

XP_041595919.1
type: Protein
SIO_000068: ncbiprotein

position:2636165:1
position: 2636165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2702240:1
position: 2702240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2636165-2636368:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2637913-2637981:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2638584-2638688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2641251-2641346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641528-2641679:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2643388-2643485:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2681409-2681535:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2682684-2682838:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2682933-2683011:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2683668-2683778:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2684321-2684415:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2684630-2684716:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2684930-2685069:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2685658-2685810:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2686696-2687784:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2690526-2690634:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2693704-2694142:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2698332-2698495:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2698613-2698705:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2700048-2700263:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2702011-2702240:1:exon

WDR33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: WDR33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA 3' end processing protein WDR33 isoform X2
translation: MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAEIEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQGFQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLNPRGMQGPPGPRENQGPAPQGMMMGHPPQEMRGPHPPSGLLGHGPQEMRGPQEMRGMQGPPAQGSMLGPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPIPFQQQKTALLGDGPRAPFNQEGQNAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGTKGRRESRESGPAIPYWINQRRRPITGGHIPSNL
SIO_010081: WDR33
subclass of: SO_0000673
so part of: WDR33
location: join(2636165..2636368,2637913..2637981,2638584..2638688,2641251..2641346,2641528..2641679,2643388..2643485,2681409..2681535,2682684..2682838,2682933..2683011,2683668..2683778,2684321..2684415,2684630..2684716,2684930..2685069,2685658..2685810,2686696..2687784,2690526..2690634,2691903..2692009)
location: region:2636165-2692009:1
so has part: feature:2636165-2636368:1:exon
so has part: feature:2637913-2637981:1:exon
so has part: feature:2638584-2638688:1:exon
so has part: feature:2641251-2641346:1:exon
so has part: feature:2641528-2641679:1:exon
so has part: feature:2643388-2643485:1:exon
so has part: feature:2681409-2681535:1:exon
so has part: feature:2682684-2682838:1:exon
so has part: feature:2682933-2683011:1:exon
so has part: feature:2683668-2683778:1:exon
so has part: feature:2684321-2684415:1:exon
so has part: feature:2684630-2684716:1:exon
so has part: feature:2684930-2685069:1:exon
so has part: feature:2685658-2685810:1:exon
so has part: feature:2686696-2687784:1:exon
so has part: feature:2690526-2690634:1:exon
so has part: feature:2691903-2692009:1:exon

XP_041595920.1
type: Protein
SIO_000068: ncbiprotein

position:2692009:1
position: 2692009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2636165-2636368:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2637913-2637981:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2638584-2638688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2641251-2641346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641528-2641679:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2643388-2643485:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2681409-2681535:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2682684-2682838:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2682933-2683011:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2683668-2683778:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2684321-2684415:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2684630-2684716:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2684930-2685069:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2685658-2685810:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2686696-2687784:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2690526-2690634:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2691903-2692009:1:exon

WDR33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: WDR33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA 3' end processing protein WDR33 isoform X4
translation: MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRVLRHGKVYRSLSTTTCSVTFD
SIO_010081: WDR33
subclass of: SO_0000673
so part of: WDR33
location: join(2636165..2636368,2637913..2637981,2638584..2638688,2641251..2641346,2641528..2641679,2643388..2643485,2674145..2674209)
location: region:2636165-2674209:1
so has part: feature:2636165-2636368:1:exon
so has part: feature:2637913-2637981:1:exon
so has part: feature:2638584-2638688:1:exon
so has part: feature:2641251-2641346:1:exon
so has part: feature:2641528-2641679:1:exon
so has part: feature:2643388-2643485:1:exon
so has part: feature:2674145-2674209:1:exon

XP_041595922.1
type: Protein
SIO_000068: ncbiprotein

position:2674209:1
position: 2674209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2636165-2636368:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2637913-2637981:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2638584-2638688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2641251-2641346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641528-2641679:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2643388-2643485:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2674145-2674209:1:exon

WDR33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: WDR33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA 3' end processing protein WDR33 isoform X6
translation: MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRDFI
SIO_010081: WDR33
subclass of: SO_0000673
so part of: WDR33
location: join(2636165..2636368,2637913..2637981,2638584..2638688,2641251..2641346,2641528..2641679,2643388..2643485,2655834..2655844)
location: region:2636165-2655844:1
so has part: feature:2636165-2636368:1:exon
so has part: feature:2637913-2637981:1:exon
so has part: feature:2638584-2638688:1:exon
so has part: feature:2641251-2641346:1:exon
so has part: feature:2641528-2641679:1:exon
so has part: feature:2643388-2643485:1:exon
so has part: feature:2655834-2655844:1:exon

XP_041595925.1
type: Protein
SIO_000068: ncbiprotein

position:2655844:1
position: 2655844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2636165-2636368:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2637913-2637981:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2638584-2638688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2641251-2641346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641528-2641679:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2643388-2643485:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2655834-2655844:1:exon

WDR33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: WDR33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA 3' end processing protein WDR33 isoform X5
translation: MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRAIHREAGSLQEA
SIO_010081: WDR33
subclass of: SO_0000673
so part of: WDR33
location: join(2636165..2636368,2637913..2637981,2638584..2638688,2641251..2641346,2641528..2641679,2643388..2643485,2650220..2650257)
location: region:2636165-2650257:1
so has part: feature:2636165-2636368:1:exon
so has part: feature:2637913-2637981:1:exon
so has part: feature:2638584-2638688:1:exon
so has part: feature:2641251-2641346:1:exon
so has part: feature:2641528-2641679:1:exon
so has part: feature:2643388-2643485:1:exon
so has part: feature:2650220-2650257:1:exon

XP_041595923.1
type: Protein
SIO_000068: ncbiprotein

position:2650257:1
position: 2650257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2636165-2636368:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2637913-2637981:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2638584-2638688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2641251-2641346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641528-2641679:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2643388-2643485:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2650220-2650257:1:exon

WDR33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: WDR33
product: WD repeat domain 33, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041739987.1
SIO_010081: WDR33
subclass of: SO_0000673
so part of: WDR33
location: join(2691903..2692011,2693704..2694142,2698332..2698495,2698613..2698705,2700048..2700263,2702011..2702643)
location: region:2691903-2702643:1
so has part: feature:2691903-2692011:1:exon
so has part: feature:2693704-2694142:1:exon
so has part: feature:2698332-2698495:1:exon
so has part: feature:2698613-2698705:1:exon
so has part: feature:2700048-2700263:1:exon
so has part: feature:2702011-2702643:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2691903-2692011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2693704-2694142:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2698332-2698495:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2698613-2698705:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2700048-2700263:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2702011-2702643:1:exon

WDR33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: WDR33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA 3' end processing protein WDR33 isoform X3
translation: MSRAAVLSMGLRGGLSGAARTAGVPLIGVALTPTSLMTSADQMTSTRTSALVTDYVNLRGEEDLYHKKRSGGVGALGLRFHLITGNSTRGMAGEQPGALQGLGKAADLEMNDSPEIPRTHVFEGAEKKALGEEYHQDMRAVPLHEEGMAFLVLKTLVQRRILILLMKQPEEEISEVEVGVRHEEEGKVYFPLLMSSLALKEDGNQIPGMEIESQGQVMNISVMLLALIIPLMMVIPQLVENVPLLSRAWTWHPCHHESVPGMMGQGPQSTENWKPQEVLLRIEEAKAEGAQGLPRECQNPGVPVPWMGITMTATTEMNPLGALQAAVLLPEGAGVAVTGVEGVP
SIO_010081: WDR33
subclass of: SO_0000673
so part of: WDR33
location: join(2693758..2694142,2698332..2698495,2698613..2698705,2700048..2700263,2702011..2702187)
location: region:2693758-2702187:1
so has part: feature:2693758-2694142:1:exon
so has part: feature:2698332-2698495:1:exon
so has part: feature:2698613-2698705:1:exon
so has part: feature:2700048-2700263:1:exon
so has part: feature:2702011-2702187:1:exon

XP_041595921.1
type: Protein
SIO_000068: ncbiprotein

position:2693758:1
position: 2693758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2702187:1
position: 2702187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2693758-2694142:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2698332-2698495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2698613-2698705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2700048-2700263:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2702011-2702187:1:exon

SFT2D3
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: SFT2D3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2703903..2707135)
location: region:2703903-2707135:-1
so has part: feature:2703903-2707135:-1:exon
subclass of: SO_0000010

121482148
type: Gene
SIO_000068: ncbigene

position:2703903:-1
position: 2703903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2707135:-1
position: 2707135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2703903-2707135:-1:exon

SFT2D3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: SFT2D3
product: SFT2 domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041739994.1
SIO_010081: SFT2D3
subclass of: SO_0000673
so part of: SFT2D3
location: complement(2703903..2707135)
location: region:2703903-2707135:-1
so has part: feature:2703903-2707135:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2703903-2707135:-1:exon

SFT2D3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: SFT2D3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle transport protein SFT2C
translation: MADLHRQLQEYLAQGKAGGVAAAEPLVAAEKAEGPAARPWLGRVGLRWAWSPAEPSAVAVAGAACGPGVTRAQRLAAGGACLLLAALCLGLAALQAPALLLRARKFALLWSLGSALALAGGALLRGGAACGRLLRGEERPSRPALLYVAALGATLYAALGLRSAGLTALGACAQVAALLAGLCGLLPWGAGPALRAALGRLGPAAGLAKALPV
SIO_010081: SFT2D3
subclass of: SO_0000673
so part of: SFT2D3
location: complement(2705259..2705900)
location: region:2705259-2705900:-1
so has part: feature:2705259-2705900:-1:exon

XP_041595928.1
type: Protein
SIO_000068: ncbiprotein

position:2705259:-1
position: 2705259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2705900:-1
position: 2705900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2705259-2705900:-1:exon

LIMS2
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LIMS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2748658..2775171
location: region:2748658-2775171:1
so has part: feature:2748658-2775171:1:exon
subclass of: SO_0000010

121482146
type: Gene
SIO_000068: ncbigene

position:2748658:1
position: 2748658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2775171:1
position: 2775171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2748658-2775171:1:exon

LIMS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LIMS2
product: LIM zinc finger domain containing 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041739992.1
SIO_010081: LIMS2
subclass of: SO_0000673
so part of: LIMS2
location: join(2748658..2748834,2755004..2755164,2757334..2757400,2757651..2757771,2770627..2770776,2771373..2771523,2772420..2772512,2773097..2773145,2773292..2773367,2773944..2775171)
location: region:2748658-2775171:1
so has part: feature:2748658-2748834:1:exon
so has part: feature:2755004-2755164:1:exon
so has part: feature:2757334-2757400:1:exon
so has part: feature:2757651-2757771:1:exon
so has part: feature:2770627-2770776:1:exon
so has part: feature:2771373-2771523:1:exon
so has part: feature:2772420-2772512:1:exon
so has part: feature:2773097-2773145:1:exon
so has part: feature:2773292-2773367:1:exon
so has part: feature:2773944-2775171:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2748658-2748834:1:exon

position:2748834:1
position: 2748834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2755004-2755164:1:exon

position:2755004:1
position: 2755004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2755164:1
position: 2755164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2757334-2757400:1:exon

position:2757334:1
position: 2757334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2757400:1
position: 2757400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2757651-2757771:1:exon

position:2757651:1
position: 2757651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2757771:1
position: 2757771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2770627-2770776:1:exon

position:2770627:1
position: 2770627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2770776:1
position: 2770776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2771373-2771523:1:exon

position:2771373:1
position: 2771373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2771523:1
position: 2771523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2772420-2772512:1:exon

position:2772420:1
position: 2772420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2772512:1
position: 2772512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2773097-2773145:1:exon

position:2773097:1
position: 2773097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2773145:1
position: 2773145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2773292-2773367:1:exon

position:2773292:1
position: 2773292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2773367:1
position: 2773367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2773944-2775171:1:exon

position:2773944:1
position: 2773944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LIMS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LIMS2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: LIM and senescent cell antigen-like-containing domain protein 2
translation: MAGRLGALAASGLYRRRRHPQRPPPPAPGNMSNALANAVCQRCQARFAPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYVCQRCHLVIDEQPLMFKNDAYHPDHFSCTHCGKELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSKLTLKNKFVEFDMKPVCKRCYEKFPLELKKRLKKLSELAARKAHPKSVGLNSA
SIO_010081: LIMS2
subclass of: SO_0000673
so part of: LIMS2
location: join(2748749..2748834,2755004..2755164,2757334..2757400,2757651..2757771,2770627..2770776,2771373..2771523,2772420..2772512,2773097..2773145,2773292..2773367,2773944..2774091)
location: region:2748749-2774091:1
so has part: feature:2748749-2748834:1:exon
so has part: feature:2755004-2755164:1:exon
so has part: feature:2757334-2757400:1:exon
so has part: feature:2757651-2757771:1:exon
so has part: feature:2770627-2770776:1:exon
so has part: feature:2771373-2771523:1:exon
so has part: feature:2772420-2772512:1:exon
so has part: feature:2773097-2773145:1:exon
so has part: feature:2773292-2773367:1:exon
so has part: feature:2773944-2774091:1:exon

XP_041595926.1
type: Protein
SIO_000068: ncbiprotein

position:2748749:1
position: 2748749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2774091:1
position: 2774091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2748749-2748834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2755004-2755164:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2757334-2757400:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2757651-2757771:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2770627-2770776:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2771373-2771523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2772420-2772512:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2773097-2773145:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2773292-2773367:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2773944-2774091:1:exon

GPR17
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: GPR17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2755194..2765990)
location: region:2755194-2765990:-1
so has part: feature:2755194-2765990:-1:exon
subclass of: SO_0000010

121482147
type: Gene
SIO_000068: ncbigene

position:2755194:-1
position: 2755194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2765990:-1
position: 2765990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2755194-2765990:-1:exon

GPR17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: GPR17
product: G protein-coupled receptor 17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739993.1
SIO_010081: GPR17
subclass of: SO_0000673
so part of: GPR17
location: complement(join(2755194..2761595,2765312..2765990))
location: region:2755194-2765990:-1
so has part: feature:2765312-2765990:-1:exon
so has part: feature:2755194-2761595:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2765312-2765990:-1:exon

position:2765312:-1
position: 2765312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2755194-2761595:-1:exon

position:2761595:-1
position: 2761595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: GPR17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uracil nucleotide/cysteinyl leukotriene receptor
translation: MNGIEVASSGLTANSSLATAQQCGQETPLENILFASFYLLDFILAFVGNALALWLFIRDHKSGTPANVFLMHLAVADLSCVLVLPTRLVYHFSGNHWPFGEIPCRLTGFLFYLNMYASIYFLTCISADRFLAIVHPVKSLKLRRPLYAHLACAFLWVVVAVAMAPLLVSAQTVQTNHTVICLQLYREKASHHALVSLAVAFTFPFVTTVTCYLLIIRSLRQGPRVEKRLKSKAVRMIAVVLTIFLVCFVPYHVHRAAYVLHYRGRGTSCATQRVLALGNRITSCLTSLNGALDPVMYFFVAEKFRDALCNLICGKRLSGPPPSFEGKTNESSLSARSEL
SIO_010081: GPR17
subclass of: SO_0000673
so part of: GPR17
location: complement(2760513..2761532)
location: region:2760513-2761532:-1
so has part: feature:2760513-2761532:-1:exon

XP_041595927.1
type: Protein
SIO_000068: ncbiprotein

position:2760513:-1
position: 2760513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2761532:-1
position: 2761532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2760513-2761532:-1:exon

MYO7B
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: MYO7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2775831..2862406)
location: region:2775831-2862406:-1
so has part: feature:2775831-2862406:-1:exon
subclass of: SO_0000010

121482143
type: Gene
SIO_000068: ncbigene

position:2775831:-1
position: 2775831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2862406:-1
position: 2862406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2775831-2862406:-1:exon

MYO7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: MYO7B
product: myosin VIIB, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041739982.1
SIO_010081: MYO7B
subclass of: SO_0000673
so part of: MYO7B
location: complement(join(2775831..2776229,2776620..2776739,2776926..2777009,2777195..2777311,2777619..2777804,2778289..2778395,2778957..2779044,2779356..2779469,2780636..2780741,2781611..2781766,2782179..2782332,2782517..2782674,2782879..2783009,2783872..2784053,2784934..2785100,2786130..2786256,2786345..2786462,2789631..2789798,2790944..2791171,2791766..2791939,2792980..2793099,2794375..2794501,2798784..2798911,2799055..2799132,2802338..2802505,2802617..2802826,2803597..2803767,2804875..2805093,2806575..2806659,2813126..2813220,2814355..2814453,2815147..2815299,2817386..2817523,2819568..2819731,2823810..2823945,2824623..2824833,2826868..2827010,2827317..2827436,2828471..2828547,2830705..2830858,2832349..2832462,2833166..2833308,2837699..2837820,2840794..2840978,2842411..2842563,2842758..2842871,2848495..2848536,2862244..2862406))
location: region:2775831-2862406:-1
so has part: feature:2862244-2862406:-1:exon
so has part: feature:2848495-2848536:-1:exon
so has part: feature:2842758-2842871:-1:exon
so has part: feature:2842411-2842563:-1:exon
so has part: feature:2840794-2840978:-1:exon
so has part: feature:2837699-2837820:-1:exon
so has part: feature:2833166-2833308:-1:exon
so has part: feature:2832349-2832462:-1:exon
so has part: feature:2830705-2830858:-1:exon
so has part: feature:2828471-2828547:-1:exon
so has part: feature:2827317-2827436:-1:exon
so has part: feature:2826868-2827010:-1:exon
so has part: feature:2824623-2824833:-1:exon
so has part: feature:2823810-2823945:-1:exon
so has part: feature:2819568-2819731:-1:exon
so has part: feature:2817386-2817523:-1:exon
so has part: feature:2815147-2815299:-1:exon
so has part: feature:2814355-2814453:-1:exon
so has part: feature:2813126-2813220:-1:exon
so has part: feature:2806575-2806659:-1:exon
so has part: feature:2804875-2805093:-1:exon
so has part: feature:2803597-2803767:-1:exon
so has part: feature:2802617-2802826:-1:exon
so has part: feature:2802338-2802505:-1:exon
so has part: feature:2799055-2799132:-1:exon
so has part: feature:2798784-2798911:-1:exon
so has part: feature:2794375-2794501:-1:exon
so has part: feature:2792980-2793099:-1:exon
so has part: feature:2791766-2791939:-1:exon
so has part: feature:2790944-2791171:-1:exon
so has part: feature:2789631-2789798:-1:exon
so has part: feature:2786345-2786462:-1:exon
so has part: feature:2786130-2786256:-1:exon
so has part: feature:2784934-2785100:-1:exon
so has part: feature:2783872-2784053:-1:exon
so has part: feature:2782879-2783009:-1:exon
so has part: feature:2782517-2782674:-1:exon
so has part: feature:2782179-2782332:-1:exon
so has part: feature:2781611-2781766:-1:exon
so has part: feature:2780636-2780741:-1:exon
so has part: feature:2779356-2779469:-1:exon
so has part: feature:2778957-2779044:-1:exon
so has part: feature:2778289-2778395:-1:exon
so has part: feature:2777619-2777804:-1:exon
so has part: feature:2777195-2777311:-1:exon
so has part: feature:2776926-2777009:-1:exon
so has part: feature:2776620-2776739:-1:exon
so has part: feature:2775831-2776229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2862244-2862406:-1:exon

position:2862244:-1
position: 2862244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2848495-2848536:-1:exon

position:2848495:-1
position: 2848495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2848536:-1
position: 2848536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2842758-2842871:-1:exon

position:2842758:-1
position: 2842758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2842871:-1
position: 2842871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2842411-2842563:-1:exon

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urn:…
SIO_000300: 5
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urn:…
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
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urn:…
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urn:…
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
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SIO_000300: 27
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SIO_000300: 28
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urn:…
SIO_000300: 29
SIO_000628: feature:2791766-2791939:-1:exon

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urn:…
SIO_000300: 30
SIO_000628: feature:2790944-2791171:-1:exon

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urn:…
SIO_000300: 31
SIO_000628: feature:2789631-2789798:-1:exon

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SIO_000300: 32
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SIO_000300: 33
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SIO_000300: 34
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SIO_000300: 36
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SIO_000300: 38
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urn:…
SIO_000300: 46
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SIO_000300: 47
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SIO_000300: 48
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MYO7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: MYO7B
product: myosin VIIB, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041739981.1
SIO_010081: MYO7B
subclass of: SO_0000673
so part of: MYO7B
location: complement(join(2775831..2776229,2776620..2776739,2776926..2777009,2777195..2777311,2777619..2777804,2778289..2778395,2778957..2779044,2779356..2779469,2780636..2780741,2781611..2781766,2782179..2782332,2782517..2782677,2782879..2783009,2783872..2784053,2784934..2785100,2786130..2786256,2786345..2786462,2789631..2789798,2790944..2791171,2791766..2791939,2792980..2793099,2794375..2794501,2798784..2798911,2799055..2799132,2802338..2802505,2802617..2802826,2803597..2803767,2804875..2805093,2806575..2806659,2813126..2813220,2814355..2814453,2815147..2815299,2817386..2817523,2819568..2819731,2823810..2823945,2824623..2824833,2826868..2827010,2827317..2827436,2828471..2828547,2830705..2830858,2832349..2832462,2833166..2833308,2837699..2837820,2840794..2840978,2842411..2842563,2842758..2842871,2848495..2848536,2862244..2862406))
location: region:2775831-2862406:-1
so has part: feature:2862244-2862406:-1:exon
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so has part: feature:2842758-2842871:-1:exon
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so has part: feature:2794375-2794501:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:2862244-2862406:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2848495-2848536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2842758-2842871:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2842411-2842563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2840794-2840978:-1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:2833166-2833308:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2832349-2832462:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2830705-2830858:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2828471-2828547:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2827317-2827436:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2826868-2827010:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2824623-2824833:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2823810-2823945:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2819568-2819731:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2817386-2817523:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2815147-2815299:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2814355-2814453:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 25
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urn:…
SIO_000300: 27
SIO_000628: feature:2794375-2794501:-1:exon

urn:…
SIO_000300: 28
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SIO_000628: feature:2791766-2791939:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2790944-2791171:-1:exon

urn:…
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SIO_000628: feature:2789631-2789798:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2786345-2786462:-1:exon

urn:…
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SIO_000628: feature:2786130-2786256:-1:exon

urn:…
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SIO_000628: feature:2784934-2785100:-1:exon

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urn:…
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SIO_000628: feature:2782879-2783009:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2782517-2782677:-1:exon

position:2782677:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 38
SIO_000628: feature:2782179-2782332:-1:exon

urn:…
SIO_000300: 39
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urn:…
SIO_000300: 40
SIO_000628: feature:2780636-2780741:-1:exon

urn:…
SIO_000300: 41
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SIO_000300: 42
SIO_000628: feature:2778957-2779044:-1:exon

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SIO_000628: feature:2778289-2778395:-1:exon

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SIO_000628: feature:2777619-2777804:-1:exon

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SIO_000628: feature:2777195-2777311:-1:exon

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urn:…
SIO_000300: 47
SIO_000628: feature:2776620-2776739:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2775831-2776229:-1:exon

MYO7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: MYO7B
product: myosin VIIB, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041739980.1
SIO_010081: MYO7B
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MYO7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: MYO7B
product: myosin VIIB, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739983.1
SIO_010081: MYO7B
subclass of: SO_0000673
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MYO7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: MYO7B
product: myosin VIIB, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739984.1
SIO_010081: MYO7B
subclass of: SO_0000673
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urn:…
SIO_000300: 19
SIO_000628: feature:2794375-2794501:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2792980-2793099:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2791766-2791939:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2790944-2791171:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2789631-2789798:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2786345-2786462:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2786130-2786256:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2784934-2785100:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2783872-2784053:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2782807-2783009:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2782517-2782674:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2782179-2782332:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2781611-2781766:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2780636-2780741:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2779356-2779469:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2778957-2779044:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2778289-2778395:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2777619-2777804:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2777195-2777311:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2776926-2777009:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2776620-2776739:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2775831-2776229:-1:exon

MYO7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: MYO7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-VIIb isoform X3
translation: MSAFRLGDHVWLNPPSANKTSVAIGSIVKETKPGKILVVDDEGKEHWIQAKDLDTLSPMHPNSVQGVDDMIRLGELNEAGMVHNLLIRYRQHKIYTYTGSILMAVNPFQVLPLYTLEQVQLYYNRHMGELPPHVFAIANNCYFNMKRNKRDQCCIISGESGAGKTETTKLILQFLATVSGQHSWIEQQVLEANPILEAFGNAKTIRNDNSSRFGKYIDIHFNPSGVIEGARIEQFLLEKSRVCRQAPEERNYHIFYGMLLGMTAEEKKLLSLGTPSEYHYLTTGNCTSCEGLNDAKDYAHVRSAMKILMFSDSENWDLSKLLAAILHLGNVEFMAAVFENLDSSDVMETPAFPTVLKLLEVEYQALRDCLIKHSIIIRGEFVTRPLNITQAADRRDAFVKGIYGHLFLWIVKKINTAIFTPPAQDPKNVRRAIGLLDIFGFENFQNNSFEQLCINFANEHLQQFFVQHVFTMEQEEYLSENIAWDYIHYNDNRPTLDLLALKPMSIISLLDEESHFPQGTDTTMLQKLNSVHANNKAYLQPRNIHEARFGIAHFAGEVYYQTEGFLEKNRDMLSTDILTLVYSSKNKFLKEIFKLESAGTKLGQSTIIRARAGSQLFKSADSSKQPSTLAGQFKKSLDQLMKILTSCQPYFIRCIKPNEYKKPLLFDRDLCLRQLRYSGMMETVRIRRSGFPIRYTFQDFAQRFGVLLPSALRLQLRDKARQMTLRIAEMQLGTDKEWKVGKTKIFLKDNQDTLLEVQRSQTLDQAAINIQRVLRGYKYRKEFLRQRQAAVTLQARWRGYYNKRNFKQILLGFERLQAIARSQWLAKQYQTMRQRMVQLQALCRGYLVRQQVQAKRRAVVVIQAYARGMAARRNFQQQKANGPLVIPAEGQKSQSILPTRKRKSIYDTITDTEMVEQVFGFLPSMIGGQEGQAPWRFEDPEAKSQKLPEVDLDAVPLVEESEDDGAGLAEYTFPKFAATYFQKSATHTHIRRPLRYPLLYHEDDADCSAALAVWNLILRFMGDLPEPVLFARKGPRGGSVMRHLHGSPGRDAGARSPQHCEATQKSSRRDRGSKDISSMKLKRSSKITGQVTSQLTIGEEAFEPDGPISDRPMSNLEKVHFIVGYAILRPNLRDEIYCQICKQLSENFKTSCLARGWILLSLCLGCFPPSERFMKYLLNFIGQGPAGYGPFCAERLRRTYANGVRTEPPTWLELQAVKSKKHIPIHVILVTGESLTVMVDSASTAREVCLHVAHKQGLSDHLGFSLQVAVYDKFWSLGSGRDHVLDTVAQCEQLARDRGENERQSPWRMYFRKEFFTPWHDSREDPASTQLIYRQVLHGVWSGEYNFEKEEDLVQLLAKHCYVQLGASVGSEAVQELLPSCIPSKLYKTKPPEKWASLVTAAHAKAQYTQKQAKPLTVQEQVVDTARLQWPLLFSRLFEVTTLSGPRLPKTQLILAVNWKGMYFLDQREKILLELSFPEVMSLITNREAQGGQRLVLSTLHEEEYKFMSPSSVAIAEMVAMFLEGLKERSVFAMALQNRKATDDTTILPFKKGDLLILTKKQGLLASENWTLGQNDRTGQTGLVPTACLYAIPTVTKPSAQLMSLLAMSPEKRKLAAQEVRPAEPLPEEQPKEKPHTLEEFSYEFFRAPEKGTVRRTVLPLARTQGLLWAHSPEPLRQPLLQQVHANAELRDAACQIFTGVLRYMGDYPGRQARPSAELTDQIFSLPLREPALQDEVYCQILKQLTHNTTRYSEERGWQLLWLCTGLFPPGKALLPHAQKFVDTRRKKPLAPDCSRRIQRVLRTGPRKQPPHPVEVEAIEQNISRICHKIYFPNDTSEMLEVGTYTRVRDVCQGIATRLQLSSWEGCSLFIKIADKVISQKEGDFFFDSLRQVSDWVKKNKPQKEGAPVTLPYQVYFMRKLWLNVTPGKDVNADTVLHYHQELPKYLRGFHKCSQEDAVHLAGLIYKAQFDNNRSQLASIPKILRELVPENLTRLMSSEE…
SIO_010081: MYO7B
subclass of: SO_0000673
so part of: MYO7B
location: complement(join(2776128..2776229,2776620..2776739,2776926..2777009,2777195..2777311,2777619..2777804,2778289..2778395,2778957..2779044,2779356..2779469,2780636..2780741,2781611..2781766,2782179..2782332,2782517..2782674,2782879..2783009,2783872..2784053,2784934..2785100,2786130..2786256,2786345..2786462,2789631..2789798,2790944..2791171,2791766..2791939,2792980..2793099,2794375..2794501,2798784..2798911,2799055..2799132,2802338..2802505,2802617..2802826,2803597..2803767,2804875..2805093,2806575..2806659,2813126..2813220,2814355..2814453,2815147..2815299,2817386..2817523,2819568..2819731,2823810..2823945,2824623..2824833,2826868..2827010,2827317..2827436,2828471..2828547,2830705..2830858,2832349..2832462,2833166..2833308,2837699..2837820,2840794..2840978,2842411..2842563,2842758..2842871,2848495..2848512))
location: region:2776128-2848512:-1
so has part: feature:2848495-2848512:-1:exon
so has part: feature:2842758-2842871:-1:exon
so has part: feature:2842411-2842563:-1:exon
so has part: feature:2840794-2840978:-1:exon
so has part: feature:2837699-2837820:-1:exon
so has part: feature:2833166-2833308:-1:exon
so has part: feature:2832349-2832462:-1:exon
so has part: feature:2830705-2830858:-1:exon
so has part: feature:2828471-2828547:-1:exon
so has part: feature:2827317-2827436:-1:exon
so has part: feature:2826868-2827010:-1:exon
so has part: feature:2824623-2824833:-1:exon
so has part: feature:2823810-2823945:-1:exon
so has part: feature:2819568-2819731:-1:exon
so has part: feature:2817386-2817523:-1:exon
so has part: feature:2815147-2815299:-1:exon
so has part: feature:2814355-2814453:-1:exon
so has part: feature:2813126-2813220:-1:exon
so has part: feature:2806575-2806659:-1:exon
so has part: feature:2804875-2805093:-1:exon
so has part: feature:2803597-2803767:-1:exon
so has part: feature:2802617-2802826:-1:exon
so has part: feature:2802338-2802505:-1:exon
so has part: feature:2799055-2799132:-1:exon
so has part: feature:2798784-2798911:-1:exon
so has part: feature:2794375-2794501:-1:exon
so has part: feature:2792980-2793099:-1:exon
so has part: feature:2791766-2791939:-1:exon
so has part: feature:2790944-2791171:-1:exon
so has part: feature:2789631-2789798:-1:exon
so has part: feature:2786345-2786462:-1:exon
so has part: feature:2786130-2786256:-1:exon
so has part: feature:2784934-2785100:-1:exon
so has part: feature:2783872-2784053:-1:exon
so has part: feature:2782879-2783009:-1:exon
so has part: feature:2782517-2782674:-1:exon
so has part: feature:2782179-2782332:-1:exon
so has part: feature:2781611-2781766:-1:exon
so has part: feature:2780636-2780741:-1:exon
so has part: feature:2779356-2779469:-1:exon
so has part: feature:2778957-2779044:-1:exon
so has part: feature:2778289-2778395:-1:exon
so has part: feature:2777619-2777804:-1:exon
so has part: feature:2777195-2777311:-1:exon
so has part: feature:2776926-2777009:-1:exon
so has part: feature:2776620-2776739:-1:exon
so has part: feature:2776128-2776229:-1:exon

XP_041595916.1
type: Protein
SIO_000068: ncbiprotein

position:2776128:-1
position: 2776128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2848512:-1
position: 2848512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2848495-2848512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2842758-2842871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2842411-2842563:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2840794-2840978:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2837699-2837820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2833166-2833308:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2832349-2832462:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2830705-2830858:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2828471-2828547:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2827317-2827436:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2826868-2827010:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2824623-2824833:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2823810-2823945:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2819568-2819731:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2817386-2817523:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2815147-2815299:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2814355-2814453:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2813126-2813220:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2806575-2806659:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2804875-2805093:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2803597-2803767:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2802617-2802826:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2802338-2802505:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2799055-2799132:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2798784-2798911:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2794375-2794501:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2792980-2793099:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2791766-2791939:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2790944-2791171:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2789631-2789798:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2786345-2786462:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2786130-2786256:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2784934-2785100:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2783872-2784053:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2782879-2783009:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2782517-2782674:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2782179-2782332:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2781611-2781766:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2780636-2780741:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2779356-2779469:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2778957-2779044:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2778289-2778395:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2777619-2777804:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2777195-2777311:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2776926-2777009:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2776620-2776739:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2776128-2776229:-1:exon

MYO7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: MYO7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-VIIb isoform X2
translation: MSAFRLGDHVWLNPPSANKTSVAIGSIVKETKPGKILVVDDEGKEHWIQAKDLDTLSPMHPNSVQGVDDMIRLGELNEAGMVHNLLIRYRQHKIYTYTGSILMAVNPFQVLPLYTLEQVQLYYNRHMGELPPHVFAIANNCYFNMKRNKRDQCCIISGESGAGKTETTKLILQFLATVSGQHSWIEQQVLEANPILEAFGNAKTIRNDNSSRFGKYIDIHFNPSGVIEGARIEQFLLEKSRVCRQAPEERNYHIFYGMLLGMTAEEKKLLSLGTPSEYHYLTTGNCTSCEGLNDAKDYAHVRSAMKILMFSDSENWDLSKLLAAILHLGNVEFMAAVFENLDSSDVMETPAFPTVLKLLEVEYQALRDCLIKHSIIIRGEFVTRPLNITQAADRRDAFVKGIYGHLFLWIVKKINTAIFTPPAQDPKNVRRAIGLLDIFGFENFQNNSFEQLCINFANEHLQQFFVQHVFTMEQEEYLSENIAWDYIHYNDNRPTLDLLALKPMSIISLLDEESHFPQGTDTTMLQKLNSVHANNKAYLQPRNIHEARFGIAHFAGEVYYQTEGFLEKNRDMLSTDILTLVYSSKNKFLKEIFKLESAGTKLGQSTIIRARAGSQLFKSADSSKQPSTLAGQFKKSLDQLMKILTSCQPYFIRCIKPNEYKKPLLFDRDLCLRQLRYSGMMETVRIRRSGFPIRYTFQDFAQRFGVLLPSALRLQLRDKARQMTLRIAEMQLGTDKEWKVGKTKIFLKDNQDTLLEVQRSQTLDQAAINIQRVLRGYKYRKEFLRQRQAAVTLQARWRGYYNKRNFKQILLGFERLQAIARSQWLAKQYQTMRQRMVQLQALCRGYLVRQQVQAKRRAVVVIQAYARGMAARRNFQQQKANGPLVIPAEGQKSQSILPTRKRKSIYDTITDTEMVEQVFGFLPSMIGGQEGQAPWRFEDPEAKSQKLPEVDLDAVPLVEESEDDGAGLAEYTFPKFAATYFQKSATHTHIRRPLRYPLLYHEDDADCSAALAVWNLILRFMGDLPEPVLFARKGPRGGSVMRHLHGSPGRDAGARSPQHCEATQKSSRRDRGSKDISSMKLKRSSKITGQVTSQLTIGEEAFEPDGPISDRPMSNLEKVHFIVGYAILRPNLRDEIYCQICKQLSENFKTSCLARGWILLSLCLGCFPPSERFMKYLLNFIGQGPAGYGPFCAERLRRTYANGVRTEPPTWLELQAVKSKKHIPIHVILVTGESLTVMVDSASTAREVCLHVAHKQGLSDHLGFSLQVAVYDKFWSLGSGRDHVLDTVAQCEQLARDRGENERQSPWRMYFRKEFFTPWHDSREDPASTQLIYRQVLHGVWSGEYNFEKEEDLVQLLAKHCYVQLGASVGSEAVQELLPSCIPSKLYKTKPPEKWASLVTAAHAKAQYTQKQAKPLTVQEQVVDTARLQWPLLFSRLFEVTTLSGPRLPKTQLILAVNWKGMYFLDQREKILLELSFPEVMSLITNREAQGGQRLVLSTLHEEEYKFMSPSSVAIAEMVAMFLEGLKERSVFAMALQNRKATDDTTILPFKKGDLLILTKKQGLLASENWTLGQNDRTGQTGLVPTACLYAIPTVTKPSAQLMSLLAMSPEKRKLAAQEVRPAEPLPEEQPKEKPHTLEEFSYEFFSRAPEKGTVRRTVLPLARTQGLLWAHSPEPLRQPLLQQVHANAELRDAACQIFTGVLRYMGDYPGRQARPSAELTDQIFSLPLREPALQDEVYCQILKQLTHNTTRYSEERGWQLLWLCTGLFPPGKALLPHAQKFVDTRRKKPLAPDCSRRIQRVLRTGPRKQPPHPVEVEAIEQNISRICHKIYFPNDTSEMLEVGTYTRVRDVCQGIATRLQLSSWEGCSLFIKIADKVISQKEGDFFFDSLRQVSDWVKKNKPQKEGAPVTLPYQVYFMRKLWLNVTPGKDVNADTVLHYHQELPKYLRGFHKCSQEDAVHLAGLIYKAQFDNNRSQLASIPKILRELVPENLTRLMSSE…
SIO_010081: MYO7B
subclass of: SO_0000673
so part of: MYO7B
location: complement(join(2776128..2776229,2776620..2776739,2776926..2777009,2777195..2777311,2777619..2777804,2778289..2778395,2778957..2779044,2779356..2779469,2780636..2780741,2781611..2781766,2782179..2782332,2782517..2782677,2782879..2783009,2783872..2784053,2784934..2785100,2786130..2786256,2786345..2786462,2789631..2789798,2790944..2791171,2791766..2791939,2792980..2793099,2794375..2794501,2798784..2798911,2799055..2799132,2802338..2802505,2802617..2802826,2803597..2803767,2804875..2805093,2806575..2806659,2813126..2813220,2814355..2814453,2815147..2815299,2817386..2817523,2819568..2819731,2823810..2823945,2824623..2824833,2826868..2827010,2827317..2827436,2828471..2828547,2830705..2830858,2832349..2832462,2833166..2833308,2837699..2837820,2840794..2840978,2842411..2842563,2842758..2842871,2848495..2848512))
location: region:2776128-2848512:-1
so has part: feature:2848495-2848512:-1:exon
so has part: feature:2842758-2842871:-1:exon
so has part: feature:2842411-2842563:-1:exon
so has part: feature:2840794-2840978:-1:exon
so has part: feature:2837699-2837820:-1:exon
so has part: feature:2833166-2833308:-1:exon
so has part: feature:2832349-2832462:-1:exon
so has part: feature:2830705-2830858:-1:exon
so has part: feature:2828471-2828547:-1:exon
so has part: feature:2827317-2827436:-1:exon
so has part: feature:2826868-2827010:-1:exon
so has part: feature:2824623-2824833:-1:exon
so has part: feature:2823810-2823945:-1:exon
so has part: feature:2819568-2819731:-1:exon
so has part: feature:2817386-2817523:-1:exon
so has part: feature:2815147-2815299:-1:exon
so has part: feature:2814355-2814453:-1:exon
so has part: feature:2813126-2813220:-1:exon
so has part: feature:2806575-2806659:-1:exon
so has part: feature:2804875-2805093:-1:exon
so has part: feature:2803597-2803767:-1:exon
so has part: feature:2802617-2802826:-1:exon
so has part: feature:2802338-2802505:-1:exon
so has part: feature:2799055-2799132:-1:exon
so has part: feature:2798784-2798911:-1:exon
so has part: feature:2794375-2794501:-1:exon
so has part: feature:2792980-2793099:-1:exon
so has part: feature:2791766-2791939:-1:exon
so has part: feature:2790944-2791171:-1:exon
so has part: feature:2789631-2789798:-1:exon
so has part: feature:2786345-2786462:-1:exon
so has part: feature:2786130-2786256:-1:exon
so has part: feature:2784934-2785100:-1:exon
so has part: feature:2783872-2784053:-1:exon
so has part: feature:2782879-2783009:-1:exon
so has part: feature:2782517-2782677:-1:exon
so has part: feature:2782179-2782332:-1:exon
so has part: feature:2781611-2781766:-1:exon
so has part: feature:2780636-2780741:-1:exon
so has part: feature:2779356-2779469:-1:exon
so has part: feature:2778957-2779044:-1:exon
so has part: feature:2778289-2778395:-1:exon
so has part: feature:2777619-2777804:-1:exon
so has part: feature:2777195-2777311:-1:exon
so has part: feature:2776926-2777009:-1:exon
so has part: feature:2776620-2776739:-1:exon
so has part: feature:2776128-2776229:-1:exon

XP_041595915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2848495-2848512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2842758-2842871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2842411-2842563:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2840794-2840978:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2837699-2837820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2833166-2833308:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2832349-2832462:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2830705-2830858:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2828471-2828547:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2827317-2827436:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2826868-2827010:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2824623-2824833:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2823810-2823945:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2819568-2819731:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2817386-2817523:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2815147-2815299:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2814355-2814453:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2813126-2813220:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2806575-2806659:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2804875-2805093:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2803597-2803767:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2802617-2802826:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2802338-2802505:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2799055-2799132:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2798784-2798911:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2794375-2794501:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2792980-2793099:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2791766-2791939:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2790944-2791171:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2789631-2789798:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2786345-2786462:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2786130-2786256:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2784934-2785100:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2783872-2784053:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2782879-2783009:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2782517-2782677:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2782179-2782332:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2781611-2781766:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2780636-2780741:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2779356-2779469:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2778957-2779044:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2778289-2778395:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2777619-2777804:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2777195-2777311:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2776926-2777009:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2776620-2776739:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2776128-2776229:-1:exon

MYO7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: MYO7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-VIIb isoform X1
translation: MSAFRLGDHVWLNPPSANKTSVAIGSIVKETKPGKILVVDDEGKEHWIQAKDLDTLSPMHPNSVQGVDDMIRLGELNEAGMVHNLLIRYRQHKIYTYTGSILMAVNPFQVLPLYTLEQVQLYYNRHMGELPPHVFAIANNCYFNMKRNKRDQCCIISGESGAGKTETTKLILQFLATVSGQHSWIEQQVLEANPILEAFGNAKTIRNDNSSRFGKYIDIHFNPSGVIEGARIEQFLLEKSRVCRQAPEERNYHIFYGMLLGMTAEEKKLLSLGTPSEYHYLTTGNCTSCEGLNDAKDYAHVRSAMKILMFSDSENWDLSKLLAAILHLGNVEFMAAVFENLDSSDVMETPAFPTVLKLLEVEYQALRDCLIKHSIIIRGEFVTRPLNITQAADRRDAFVKGIYGHLFLWIVKKINTAIFTPPAQDPKNVRRAIGLLDIFGFENFQNNSFEQLCINFANEHLQQFFVQHVFTMEQEEYLSENIAWDYIHYNDNRPTLDLLALKPMSIISLLDEESHFPQGTDTTMLQKLNSVHANNKAYLQPRNIHEARFGIAHFAGEVYYQTEGFLEKNRDMLSTDILTLVYSSKNKFLKEIFKLESAGTKLGQSTIIRARAGSQLFKSADSSKQPSTLAGQFKKSLDQLMKILTSCQPYFIRCIKPNEYKKPLLFDRDLCLRQLRYSGMMETVRIRRSGFPIRYTFQDFAQRFGVLLPSALRLQLRDKARQMTLRIAEMQLGTDKEWKVGKTKIFLKDNQDTLLEVQRSQTLDQAAINIQRVLRGYKYRKEFLRQRQAAVTLQARWRGYYNKRNFKQILLGFERLQAIARSQWLAKQYQTMRQRMVQLQALCRGYLVRQQVQAKRRAVVVIQAYARGMAARRNFQQQKANGPLVIPAEGQKSQSILPTRKRKSIYDTITDTEMVEQVFGFLPSMIGGQEGQAPWRFEDPEAKSQKLPEVDLDAVPLVEESEDDGAGLAEYTFPKFAATYFQKSATHTHIRRPLRYPLLYHEDDADCSAALAVWNLILRFMGDLPEPVLFARKGPRGGSVMRHLHGSPGRDAGARSPQHCEATQKSSRRDRGSKDISSMKLKRSSKITGQVTSQLTIGEEAFEPDGPISDRPMSNLEKVHFIVGYAILRPNLRDEIYCQICKQLSENFKTSCLARGWILLSLCLGCFPPSERFMKYLLNFIGQGPAGYGPFCAERLRRTYANGVRTEPPTWLELQAVKSKKHIPIHVILVTGESLTVMVDSASTAREVCLHVAHKQGLSDHLGFSLQVAVYDKFWSLGSGRDHVLDTVAQCEQLARDRGENERQSPWRMYFRKEFFTPWHDSREDPASTQLIYRQVLHGVWSGEYNFEKEEDLVQLLAKHCYVQLGASVGSEAVQELLPSCIPSKLYKTKPPEKWASLVTAAHAKAQYTQKQAKPLTVQEQVVDTARLQWPLLFSRLFEVTTLSGPRLPKTQLILAVNWKGMYFLDQREKILLELSFPEVMSLITNREAQGGQRLVLSTLHEEEYKFMSPSSVAIAEMVAMFLEGLKERSVFAMALQNRKATDDTTILPFKKGDLLILTKKQGLLASENWTLGQNDRTGQTGLVPTACLYAIPTVTKPSAQLMSLLAMSPEKRKLAAQEVRPAEPLPEEQPKEKPHTLEEFSYEFFRCPLRPPPGPASPWCSLKFTGKPRRAPEKGTVRRTVLPLARTQGLLWAHSPEPLRQPLLQQVHANAELRDAACQIFTGVLRYMGDYPGRQARPSAELTDQIFSLPLREPALQDEVYCQILKQLTHNTTRYSEERGWQLLWLCTGLFPPGKALLPHAQKFVDTRRKKPLAPDCSRRIQRVLRTGPRKQPPHPVEVEAIEQNISRICHKIYFPNDTSEMLEVGTYTRVRDVCQGIATRLQLSSWEGCSLFIKIADKVISQKEGDFFFDSLRQVSDWVKKNKPQKEGAPVTLPYQVYFMRKLWLNVTPGKDVNADTVLHYHQELPKYLRGFHKCSQEDAVHLAGLIYKAQFDNNRSQ…
SIO_010081: MYO7B
subclass of: SO_0000673
so part of: MYO7B
location: complement(join(2776128..2776229,2776620..2776739,2776926..2777009,2777195..2777311,2777619..2777804,2778289..2778395,2778957..2779044,2779356..2779469,2780636..2780741,2781611..2781766,2782179..2782332,2782517..2782674,2782807..2783009,2783872..2784053,2784934..2785100,2786130..2786256,2786345..2786462,2789631..2789798,2790944..2791171,2791766..2791939,2792980..2793099,2794375..2794501,2798784..2798911,2799055..2799132,2802338..2802505,2802617..2802826,2803597..2803767,2804875..2805093,2806575..2806659,2813126..2813220,2814355..2814453,2815147..2815299,2817386..2817523,2819568..2819731,2823810..2823945,2824623..2824833,2826868..2827010,2827317..2827436,2828471..2828547,2830705..2830858,2832349..2832462,2833166..2833308,2837699..2837820,2840794..2840978,2842411..2842563,2842758..2842871,2848495..2848512))
location: region:2776128-2848512:-1
so has part: feature:2848495-2848512:-1:exon
so has part: feature:2842758-2842871:-1:exon
so has part: feature:2842411-2842563:-1:exon
so has part: feature:2840794-2840978:-1:exon
so has part: feature:2837699-2837820:-1:exon
so has part: feature:2833166-2833308:-1:exon
so has part: feature:2832349-2832462:-1:exon
so has part: feature:2830705-2830858:-1:exon
so has part: feature:2828471-2828547:-1:exon
so has part: feature:2827317-2827436:-1:exon
so has part: feature:2826868-2827010:-1:exon
so has part: feature:2824623-2824833:-1:exon
so has part: feature:2823810-2823945:-1:exon
so has part: feature:2819568-2819731:-1:exon
so has part: feature:2817386-2817523:-1:exon
so has part: feature:2815147-2815299:-1:exon
so has part: feature:2814355-2814453:-1:exon
so has part: feature:2813126-2813220:-1:exon
so has part: feature:2806575-2806659:-1:exon
so has part: feature:2804875-2805093:-1:exon
so has part: feature:2803597-2803767:-1:exon
so has part: feature:2802617-2802826:-1:exon
so has part: feature:2802338-2802505:-1:exon
so has part: feature:2799055-2799132:-1:exon
so has part: feature:2798784-2798911:-1:exon
so has part: feature:2794375-2794501:-1:exon
so has part: feature:2792980-2793099:-1:exon
so has part: feature:2791766-2791939:-1:exon
so has part: feature:2790944-2791171:-1:exon
so has part: feature:2789631-2789798:-1:exon
so has part: feature:2786345-2786462:-1:exon
so has part: feature:2786130-2786256:-1:exon
so has part: feature:2784934-2785100:-1:exon
so has part: feature:2783872-2784053:-1:exon
so has part: feature:2782807-2783009:-1:exon
so has part: feature:2782517-2782674:-1:exon
so has part: feature:2782179-2782332:-1:exon
so has part: feature:2781611-2781766:-1:exon
so has part: feature:2780636-2780741:-1:exon
so has part: feature:2779356-2779469:-1:exon
so has part: feature:2778957-2779044:-1:exon
so has part: feature:2778289-2778395:-1:exon
so has part: feature:2777619-2777804:-1:exon
so has part: feature:2777195-2777311:-1:exon
so has part: feature:2776926-2777009:-1:exon
so has part: feature:2776620-2776739:-1:exon
so has part: feature:2776128-2776229:-1:exon

XP_041595914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2848495-2848512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2842758-2842871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2842411-2842563:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2840794-2840978:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2837699-2837820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2833166-2833308:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2832349-2832462:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2830705-2830858:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2828471-2828547:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2827317-2827436:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2826868-2827010:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2824623-2824833:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2823810-2823945:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2819568-2819731:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2817386-2817523:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2815147-2815299:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2814355-2814453:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2813126-2813220:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2806575-2806659:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2804875-2805093:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2803597-2803767:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2802617-2802826:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2802338-2802505:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2799055-2799132:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2798784-2798911:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2794375-2794501:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2792980-2793099:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2791766-2791939:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2790944-2791171:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2789631-2789798:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2786345-2786462:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2786130-2786256:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2784934-2785100:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2783872-2784053:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2782807-2783009:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2782517-2782674:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2782179-2782332:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2781611-2781766:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2780636-2780741:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2779356-2779469:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2778957-2779044:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2778289-2778395:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2777619-2777804:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2777195-2777311:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2776926-2777009:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2776620-2776739:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2776128-2776229:-1:exon

MYO7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: MYO7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-VIIb isoform X4
translation: MLLGMTAEEKKLLSLGTPSEYHYLTTGNCTSCEGLNDAKDYAHVRSAMKILMFSDSENWDLSKLLAAILHLGNVEFMAAVFENLDSSDVMETPAFPTVLKLLEVEYQALRDCLIKHSIIIRGEFVTRPLNITQAADRRDAFVKGIYGHLFLWIVKKINTAIFTPPAQDPKNVRRAIGLLDIFGFENFQNNSFEQLCINFANEHLQQFFVQHVFTMEQEEYLSENIAWDYIHYNDNRPTLDLLALKPMSIISLLDEESHFPQGTDTTMLQKLNSVHANNKAYLQPRNIHEARFGIAHFAGEVYYQTEGFLEKNRDMLSTDILTLVYSSKNKFLKEIFKLESAGTKLGQSTIIRARAGSQLFKSADSSKQPSTLAGQFKKSLDQLMKILTSCQPYFIRCIKPNEYKKPLLFDRDLCLRQLRYSGMMETVRIRRSGFPIRYTFQDFAQRFGVLLPSALRLQLRDKARQMTLRIAEMQLGTDKEWKVGKTKIFLKDNQDTLLEVQRSQTLDQAAINIQRVLRGYKYRKEFLRQRQAAVTLQARWRGYYNKRNFKQILLGFERLQAIARSQWLAKQYQTMRQRMVQLQALCRGYLVRQQVQAKRRAVVVIQAYARGMAARRNFQQQKANGPLVIPAEGQKSQSILPTRKRKSIYDTITDTEMVEQVFGFLPSMIGGQEGQAPWRFEDPEAKSQKLPEVDLDAVPLVEESEDDGAGLAEYTFPKFAATYFQKSATHTHIRRPLRYPLLYHEDDADCSAALAVWNLILRFMGDLPEPVLFARKGPRGGSVMRHLHGSPGRDAGARSPQHCEATQKSSRRDRGSKDISSMKLKRSSKITGQVTSQLTIGEEAFEPDGPISDRPMSNLEKVHFIVGYAILRPNLRDEIYCQICKQLSENFKTSCLARGWILLSLCLGCFPPSERFMKYLLNFIGQGPAGYGPFCAERLRRTYANGVRTEPPTWLELQAVKSKKHIPIHVILVTGESLTVMVDSASTAREVCLHVAHKQGLSDHLGFSLQVAVYDKFWSLGSGRDHVLDTVAQCEQLARDRGENERQSPWRMYFRKEFFTPWHDSREDPASTQLIYRQVLHGVWSGEYNFEKEEDLVQLLAKHCYVQLGASVGSEAVQELLPSCIPSKLYKTKPPEKWASLVTAAHAKAQYTQKQAKPLTVQEQVVDTARLQWPLLFSRLFEVTTLSGPRLPKTQLILAVNWKGMYFLDQREKILLELSFPEVMSLITNREAQGGQRLVLSTLHEEEYKFMSPSSVAIAEMVAMFLEGLKERSVFAMALQNRKATDDTTILPFKKGDLLILTKKQGLLASENWTLGQNDRTGQTGLVPTACLYAIPTVTKPSAQLMSLLAMSPEKRKLAAQEVRPAEPLPEEQPKEKPHTLEEFSYEFFRCPLRPPPGPASPWCSLKFTGKPRRAPEKGTVRRTVLPLARTQGLLWAHSPEPLRQPLLQQVHANAELRDAACQIFTGVLRYMGDYPGRQARPSAELTDQIFSLPLREPALQDEVYCQILKQLTHNTTRYSEERGWQLLWLCTGLFPPGKALLPHAQKFVDTRRKKPLAPDCSRRIQRVLRTGPRKQPPHPVEVEAIEQNISRICHKIYFPNDTSEMLEVGTYTRVRDVCQGIATRLQLSSWEGCSLFIKIADKVISQKEGDFFFDSLRQVSDWVKKNKPQKEGAPVTLPYQVYFMRKLWLNVTPGKDVNADTVLHYHQELPKYLRGFHKCSQEDAVHLAGLIYKAQFDNNRSQLASIPKILRELVPENLTRLMSSEEWRKNILLAYDKHKDKTVEEAKVAFLKGICRWPTFGSAFFEVKQTSEPSYPDIILIAINRHGVLLIHPKTKELLTTYPFTKISSWSSGSTYFHMALGSLARGSRLLCETSLGYKMDDLLTSYVQQLLSAMNKQRGSQTPALADP
SIO_010081: MYO7B
subclass of: SO_0000673
so part of: MYO7B
location: complement(join(2776128..2776229,2776620..2776739,2776926..2777009,2777195..2777311,2777619..2777804,2778289..2778395,2778957..2779044,2779356..2779469,2780636..2780741,2781611..2781766,2782179..2782332,2782517..2782674,2782807..2783009,2783872..2784053,2784934..2785100,2786130..2786256,2786345..2786462,2789631..2789798,2790944..2791171,2791766..2791939,2792980..2793099,2794375..2794501,2798784..2798911,2799055..2799132,2802338..2802505,2802617..2802826,2803597..2803767,2804875..2805093,2806575..2806659,2813126..2813220,2814355..2814453,2815147..2815299,2817386..2817523,2819568..2819731,2823810..2823945,2824623..2824833,2826868..2827010,2827317..2827436,2828471..2828547,2830705..2830858,2832349..2832426))
location: region:2776128-2832426:-1
so has part: feature:2832349-2832426:-1:exon
so has part: feature:2830705-2830858:-1:exon
so has part: feature:2828471-2828547:-1:exon
so has part: feature:2827317-2827436:-1:exon
so has part: feature:2826868-2827010:-1:exon
so has part: feature:2824623-2824833:-1:exon
so has part: feature:2823810-2823945:-1:exon
so has part: feature:2819568-2819731:-1:exon
so has part: feature:2817386-2817523:-1:exon
so has part: feature:2815147-2815299:-1:exon
so has part: feature:2814355-2814453:-1:exon
so has part: feature:2813126-2813220:-1:exon
so has part: feature:2806575-2806659:-1:exon
so has part: feature:2804875-2805093:-1:exon
so has part: feature:2803597-2803767:-1:exon
so has part: feature:2802617-2802826:-1:exon
so has part: feature:2802338-2802505:-1:exon
so has part: feature:2799055-2799132:-1:exon
so has part: feature:2798784-2798911:-1:exon
so has part: feature:2794375-2794501:-1:exon
so has part: feature:2792980-2793099:-1:exon
so has part: feature:2791766-2791939:-1:exon
so has part: feature:2790944-2791171:-1:exon
so has part: feature:2789631-2789798:-1:exon
so has part: feature:2786345-2786462:-1:exon
so has part: feature:2786130-2786256:-1:exon
so has part: feature:2784934-2785100:-1:exon
so has part: feature:2783872-2784053:-1:exon
so has part: feature:2782807-2783009:-1:exon
so has part: feature:2782517-2782674:-1:exon
so has part: feature:2782179-2782332:-1:exon
so has part: feature:2781611-2781766:-1:exon
so has part: feature:2780636-2780741:-1:exon
so has part: feature:2779356-2779469:-1:exon
so has part: feature:2778957-2779044:-1:exon
so has part: feature:2778289-2778395:-1:exon
so has part: feature:2777619-2777804:-1:exon
so has part: feature:2777195-2777311:-1:exon
so has part: feature:2776926-2777009:-1:exon
so has part: feature:2776620-2776739:-1:exon
so has part: feature:2776128-2776229:-1:exon

XP_041595917.1
type: Protein
SIO_000068: ncbiprotein

position:2832426:-1
position: 2832426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2832349-2832426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2830705-2830858:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2828471-2828547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2827317-2827436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2826868-2827010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2824623-2824833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2823810-2823945:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2819568-2819731:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2817386-2817523:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2815147-2815299:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2814355-2814453:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2813126-2813220:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2806575-2806659:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2804875-2805093:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2803597-2803767:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2802617-2802826:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2802338-2802505:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2799055-2799132:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2798784-2798911:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2794375-2794501:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2792980-2793099:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2791766-2791939:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2790944-2791171:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2789631-2789798:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2786345-2786462:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2786130-2786256:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2784934-2785100:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2783872-2784053:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2782807-2783009:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2782517-2782674:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2782179-2782332:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2781611-2781766:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2780636-2780741:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2779356-2779469:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2778957-2779044:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2778289-2778395:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2777619-2777804:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2777195-2777311:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2776926-2777009:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2776620-2776739:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2776128-2776229:-1:exon

MYO7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: MYO7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-VIIb isoform X5
translation: METPAFPTVLKLLEVEYQALRDCLIKHSIIIRGEFVTRPLNITQAADRRDAFVKGIYGHLFLWIVKKINTAIFTPPAQDPKNVRRAIGLLDIFGFENFQNNSFEQLCINFANEHLQQFFVQHVFTMEQEEYLSENIAWDYIHYNDNRPTLDLLALKPMSIISLLDEESHFPQGTDTTMLQKLNSVHANNKAYLQPRNIHEARFGIAHFAGEVYYQTEGFLEKNRDMLSTDILTLVYSSKNKFLKEIFKLESAGTKLGQSTIIRARAGSQLFKSADSSKQPSTLAGQFKKSLDQLMKILTSCQPYFIRCIKPNEYKKPLLFDRDLCLRQLRYSGMMETVRIRRSGFPIRYTFQDFAQRFGVLLPSALRLQLRDKARQMTLRIAEMQLGTDKEWKVGKTKIFLKDNQDTLLEVQRSQTLDQAAINIQRVLRGYKYRKEFLRQRQAAVTLQARWRGYYNKRNFKQILLGFERLQAIARSQWLAKQYQTMRQRMVQLQALCRGYLVRQQVQAKRRAVVVIQAYARGMAARRNFQQQKANGPLVIPAEGQKSQSILPTRKRKSIYDTITDTEMVEQVFGFLPSMIGGQEGQAPWRFEDPEAKSQKLPEVDLDAVPLVEESEDDGAGLAEYTFPKFAATYFQKSATHTHIRRPLRYPLLYHEDDADCSAALAVWNLILRFMGDLPEPVLFARKGPRGGSVMRHLHGSPGRDAGARSPQHCEATQKSSRRDRGSKDISSMKLKRSSKITGQVTSQLTIGEEAFEPDGPISDRPMSNLEKVHFIVGYAILRPNLRDEIYCQICKQLSENFKTSCLARGWILLSLCLGCFPPSERFMKYLLNFIGQGPAGYGPFCAERLRRTYANGVRTEPPTWLELQAVKSKKHIPIHVILVTGESLTVMVDSASTAREVCLHVAHKQGLSDHLGFSLQVAVYDKFWSLGSGRDHVLDTVAQCEQLARDRGENERQSPWRMYFRKEFFTPWHDSREDPASTQLIYRQVLHGVWSGEYNFEKEEDLVQLLAKHCYVQLGASVGSEAVQELLPSCIPSKLYKTKPPEKWASLVTAAHAKAQYTQKQAKPLTVQEQVVDTARLQWPLLFSRLFEVTTLSGPRLPKTQLILAVNWKGMYFLDQREKILLELSFPEVMSLITNREAQGGQRLVLSTLHEEEYKFMSPSSVAIAEMVAMFLEGLKERSVFAMALQNRKATDDTTILPFKKGDLLILTKKQGLLASENWTLGQNDRTGQTGLVPTACLYAIPTVTKPSAQLMSLLAMSPEKRKLAAQEVRPAEPLPEEQPKEKPHTLEEFSYEFFRCPLRPPPGPASPWCSLKFTGKPRRAPEKGTVRRTVLPLARTQGLLWAHSPEPLRQPLLQQVHANAELRDAACQIFTGVLRYMGDYPGRQARPSAELTDQIFSLPLREPALQDEVYCQILKQLTHNTTRYSEERGWQLLWLCTGLFPPGKALLPHAQKFVDTRRKKPLAPDCSRRIQRVLRTGPRKQPPHPVEVEAIEQNISRICHKIYFPNDTSEMLEVGTYTRVRDVCQGIATRLQLSSWEGCSLFIKIADKVISQKEGDFFFDSLRQVSDWVKKNKPQKEGAPVTLPYQVYFMRKLWLNVTPGKDVNADTVLHYHQELPKYLRGFHKCSQEDAVHLAGLIYKAQFDNNRSQLASIPKILRELVPENLTRLMSSEEWRKNILLAYDKHKDKTVEEAKVAFLKGICRWPTFGSAFFEVKQTSEPSYPDIILIAINRHGVLLIHPKTKELLTTYPFTKISSWSSGSTYFHMALGSLARGSRLLCETSLGYKMDDLLTSYVQQLLSAMNKQRGSQTPALADP
SIO_010081: MYO7B
subclass of: SO_0000673
so part of: MYO7B
location: complement(join(2776128..2776229,2776620..2776739,2776926..2777009,2777195..2777311,2777619..2777804,2778289..2778395,2778957..2779044,2779356..2779469,2780636..2780741,2781611..2781766,2782179..2782332,2782517..2782674,2782807..2783009,2783872..2784053,2784934..2785100,2786130..2786256,2786345..2786462,2789631..2789798,2790944..2791171,2791766..2791939,2792980..2793099,2794375..2794501,2798784..2798911,2799055..2799132,2802338..2802505,2802617..2802826,2803597..2803767,2804875..2805093,2806575..2806659,2813126..2813220,2814355..2814453,2815147..2815299,2817386..2817523,2819568..2819731,2823810..2823945,2824623..2824833,2826868..2827010,2827317..2827436,2828471..2828512))
location: region:2776128-2828512:-1
so has part: feature:2828471-2828512:-1:exon
so has part: feature:2827317-2827436:-1:exon
so has part: feature:2826868-2827010:-1:exon
so has part: feature:2824623-2824833:-1:exon
so has part: feature:2823810-2823945:-1:exon
so has part: feature:2819568-2819731:-1:exon
so has part: feature:2817386-2817523:-1:exon
so has part: feature:2815147-2815299:-1:exon
so has part: feature:2814355-2814453:-1:exon
so has part: feature:2813126-2813220:-1:exon
so has part: feature:2806575-2806659:-1:exon
so has part: feature:2804875-2805093:-1:exon
so has part: feature:2803597-2803767:-1:exon
so has part: feature:2802617-2802826:-1:exon
so has part: feature:2802338-2802505:-1:exon
so has part: feature:2799055-2799132:-1:exon
so has part: feature:2798784-2798911:-1:exon
so has part: feature:2794375-2794501:-1:exon
so has part: feature:2792980-2793099:-1:exon
so has part: feature:2791766-2791939:-1:exon
so has part: feature:2790944-2791171:-1:exon
so has part: feature:2789631-2789798:-1:exon
so has part: feature:2786345-2786462:-1:exon
so has part: feature:2786130-2786256:-1:exon
so has part: feature:2784934-2785100:-1:exon
so has part: feature:2783872-2784053:-1:exon
so has part: feature:2782807-2783009:-1:exon
so has part: feature:2782517-2782674:-1:exon
so has part: feature:2782179-2782332:-1:exon
so has part: feature:2781611-2781766:-1:exon
so has part: feature:2780636-2780741:-1:exon
so has part: feature:2779356-2779469:-1:exon
so has part: feature:2778957-2779044:-1:exon
so has part: feature:2778289-2778395:-1:exon
so has part: feature:2777619-2777804:-1:exon
so has part: feature:2777195-2777311:-1:exon
so has part: feature:2776926-2777009:-1:exon
so has part: feature:2776620-2776739:-1:exon
so has part: feature:2776128-2776229:-1:exon

XP_041595918.1
type: Protein
SIO_000068: ncbiprotein

position:2828512:-1
position: 2828512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2828471-2828512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2827317-2827436:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2826868-2827010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2824623-2824833:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2823810-2823945:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2819568-2819731:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2817386-2817523:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2815147-2815299:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2814355-2814453:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2813126-2813220:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2806575-2806659:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2804875-2805093:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2803597-2803767:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2802617-2802826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2802338-2802505:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2799055-2799132:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2798784-2798911:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2794375-2794501:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2792980-2793099:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2791766-2791939:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2790944-2791171:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2789631-2789798:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2786345-2786462:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2786130-2786256:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2784934-2785100:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2783872-2784053:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2782807-2783009:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2782517-2782674:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2782179-2782332:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2781611-2781766:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2780636-2780741:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2779356-2779469:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2778957-2779044:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2778289-2778395:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2777619-2777804:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2777195-2777311:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2776926-2777009:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2776620-2776739:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2776128-2776229:-1:exon

IWS1
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: IWS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2880782..2921321
location: region:2880782-2921321:1
so has part: feature:2880782-2921321:1:exon
subclass of: SO_0000010

121481970
type: Gene
SIO_000068: ncbigene

position:2880782:1
position: 2880782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2921321:1
position: 2921321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2880782-2921321:1:exon

IWS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: IWS1
product: interacts with SUPT6H, CTD assembly factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739683.1
SIO_010081: IWS1
subclass of: SO_0000673
so part of: IWS1
location: join(2880782..2881115,2883439..2883557,2898886..2900035,2901224..2901416,2901944..2902001,2906901..2906998,2907706..2907856,2908325..2908407,2909837..2909966,2910819..2910936,2912643..2912754,2913320..2913376,2916204..2916315,2920946..2921321)
location: region:2880782-2921321:1
so has part: feature:2880782-2881115:1:exon
so has part: feature:2883439-2883557:1:exon
so has part: feature:2898886-2900035:1:exon
so has part: feature:2901224-2901416:1:exon
so has part: feature:2901944-2902001:1:exon
so has part: feature:2906901-2906998:1:exon
so has part: feature:2907706-2907856:1:exon
so has part: feature:2908325-2908407:1:exon
so has part: feature:2909837-2909966:1:exon
so has part: feature:2910819-2910936:1:exon
so has part: feature:2912643-2912754:1:exon
so has part: feature:2913320-2913376:1:exon
so has part: feature:2916204-2916315:1:exon
so has part: feature:2920946-2921321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2880782-2881115:1:exon

position:2881115:1
position: 2881115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2883439-2883557:1:exon

position:2883439:1
position: 2883439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2883557:1
position: 2883557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2898886-2900035:1:exon

position:2898886:1
position: 2898886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2900035:1
position: 2900035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2901224-2901416:1:exon

position:2901224:1
position: 2901224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2901416:1
position: 2901416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2901944-2902001:1:exon

position:2901944:1
position: 2901944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2902001:1
position: 2902001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2906901-2906998:1:exon

position:2906901:1
position: 2906901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2906998:1
position: 2906998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2907706-2907856:1:exon

position:2907706:1
position: 2907706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2907856:1
position: 2907856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2908325-2908407:1:exon

position:2908325:1
position: 2908325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2908407:1
position: 2908407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2909837-2909966:1:exon

position:2909837:1
position: 2909837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2909966:1
position: 2909966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2910819-2910936:1:exon

position:2910819:1
position: 2910819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2910936:1
position: 2910936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2912643-2912754:1:exon

position:2912643:1
position: 2912643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2912754:1
position: 2912754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2913320-2913376:1:exon

position:2913320:1
position: 2913320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2913376:1
position: 2913376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2916204-2916315:1:exon

position:2916204:1
position: 2916204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2916315:1
position: 2916315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2920946-2921321:1:exon

position:2920946:1
position: 2920946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IWS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: IWS1
product: interacts with SUPT6H, CTD assembly factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739685.1
SIO_010081: IWS1
subclass of: SO_0000673
so part of: IWS1
location: join(2880782..2881115,2883439..2883557,2898886..2900035,2901227..2901416,2901944..2902001,2906901..2906998,2907706..2907856,2908325..2908407,2909837..2909966,2910819..2910936,2912643..2912754,2913320..2913376,2916204..2916315,2920946..2921321)
location: region:2880782-2921321:1
so has part: feature:2880782-2881115:1:exon
so has part: feature:2883439-2883557:1:exon
so has part: feature:2898886-2900035:1:exon
so has part: feature:2901227-2901416:1:exon
so has part: feature:2901944-2902001:1:exon
so has part: feature:2906901-2906998:1:exon
so has part: feature:2907706-2907856:1:exon
so has part: feature:2908325-2908407:1:exon
so has part: feature:2909837-2909966:1:exon
so has part: feature:2910819-2910936:1:exon
so has part: feature:2912643-2912754:1:exon
so has part: feature:2913320-2913376:1:exon
so has part: feature:2916204-2916315:1:exon
so has part: feature:2920946-2921321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2880782-2881115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2883439-2883557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2898886-2900035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2901227-2901416:1:exon

position:2901227:1
position: 2901227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2901944-2902001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2906901-2906998:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2907706-2907856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2908325-2908407:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2909837-2909966:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2910819-2910936:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2912643-2912754:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2913320-2913376:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2916204-2916315:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2920946-2921321:1:exon

IWS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: IWS1
product: interacts with SUPT6H, CTD assembly factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739684.1
SIO_010081: IWS1
subclass of: SO_0000673
so part of: IWS1
location: join(2880782..2881115,2883442..2883557,2898886..2900035,2901224..2901416,2901944..2902001,2906901..2906998,2907706..2907856,2908325..2908407,2909837..2909966,2910819..2910936,2912643..2912754,2913320..2913376,2916204..2916315,2920946..2921321)
location: region:2880782-2921321:1
so has part: feature:2880782-2881115:1:exon
so has part: feature:2883442-2883557:1:exon
so has part: feature:2898886-2900035:1:exon
so has part: feature:2901224-2901416:1:exon
so has part: feature:2901944-2902001:1:exon
so has part: feature:2906901-2906998:1:exon
so has part: feature:2907706-2907856:1:exon
so has part: feature:2908325-2908407:1:exon
so has part: feature:2909837-2909966:1:exon
so has part: feature:2910819-2910936:1:exon
so has part: feature:2912643-2912754:1:exon
so has part: feature:2913320-2913376:1:exon
so has part: feature:2916204-2916315:1:exon
so has part: feature:2920946-2921321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2880782-2881115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2883442-2883557:1:exon

position:2883442:1
position: 2883442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2898886-2900035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2901224-2901416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2901944-2902001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2906901-2906998:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2907706-2907856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2908325-2908407:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2909837-2909966:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2910819-2910936:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2912643-2912754:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2913320-2913376:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2916204-2916315:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2920946-2921321:1:exon

IWS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: IWS1
product: interacts with SUPT6H, CTD assembly factor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739687.1
SIO_010081: IWS1
subclass of: SO_0000673
so part of: IWS1
location: join(2880782..2881115,2883439..2883557,2898886..2900035,2901224..2901416,2901944..2902001,2906901..2906998,2907706..2907856,2908325..2908407,2909837..2909966,2910819..2910936,2912643..2912754,2913320..2913376,2916204..2916315,2916771..2916928,2920946..2921079)
location: region:2880782-2921079:1
so has part: feature:2880782-2881115:1:exon
so has part: feature:2883439-2883557:1:exon
so has part: feature:2898886-2900035:1:exon
so has part: feature:2901224-2901416:1:exon
so has part: feature:2901944-2902001:1:exon
so has part: feature:2906901-2906998:1:exon
so has part: feature:2907706-2907856:1:exon
so has part: feature:2908325-2908407:1:exon
so has part: feature:2909837-2909966:1:exon
so has part: feature:2910819-2910936:1:exon
so has part: feature:2912643-2912754:1:exon
so has part: feature:2913320-2913376:1:exon
so has part: feature:2916204-2916315:1:exon
so has part: feature:2916771-2916928:1:exon
so has part: feature:2920946-2921079:1:exon

position:2921079:1
position: 2921079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2880782-2881115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2883439-2883557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2898886-2900035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2901224-2901416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2901944-2902001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2906901-2906998:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2907706-2907856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2908325-2908407:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2909837-2909966:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2910819-2910936:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2912643-2912754:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2913320-2913376:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2916204-2916315:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2916771-2916928:1:exon

position:2916771:1
position: 2916771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2916928:1
position: 2916928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2920946-2921079:1:exon

IWS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: IWS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein IWS1 homolog isoform X1
translation: MDSEYYSGDQSADDGGATPVQDERDSGSDVEDDVNEQHSGSDTGSVERHSENEPSDREDGLNKRHHVTDSENDDPSNLNASDSESEELQRQKDSDSESEEHAEPPASDSENEDTNQHGSDSESEETRKLPVSDSENEELLNGHASDSENEDVRKHPASDSEVEELPKSPASDSETEDALKPQISDSESEEPQQHQASDSENEELPKPRISDSESEELPKPRVSDSESEEPQRTQASDSENEELPKPRISDSESEDPPRHQASDSENEELPKPRISDSESEGPPRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVSDSESEEPQKGPASDSETEDASRHKQKPESDDDSDGENKGEDTEMQNDSFHSDSHIDRKRIQSSDSEEEEPKRPKMDSDEDEEKVGEEEKVAKRKAAVLSDSEDEEKASAKKSRVVSDADDSDSDVISDKSGKREKTLASDSEEEVGKEELSDKKNEEKDLFGSDSESGNEEENLIADIFGESGDEEEEEFTGFNQEDLEEEKSETQVKEAEDSDSDDNIKRGKHMDFLSDFEMMLQRKKSMSGKRRRNRDGGTFISDADDVVSAMIVKMNEAAEEDRQLNNQKKPALKKLTLLPTVVMHLKKQDLKETFIDSGVMSAIKEWLSPLPDRSLPALKIREELLKILQELPSVSQETLKHSGIGRAVMYLYKHPKESRSNKDMAGKLINEWSRPIFGLTSNYKGMTREEREQRDLEQMPQRRRMNSTGGQTPRRDLEKVLTGEEKALRPGDPGFCARARVPMPSNKDYVVRPKWNVEMESSRFQGTSKKGISRLDKQMRKFTDIRKKSRSAHAVKISIEGNKMPL
SIO_010081: IWS1
subclass of: SO_0000673
so part of: IWS1
location: join(2881082..2881115,2883439..2883557,2898886..2900035,2901224..2901416,2901944..2902001,2906901..2906998,2907706..2907856,2908325..2908407,2909837..2909966,2910819..2910936,2912643..2912754,2913320..2913376,2916204..2916315,2920946..2921077)
location: region:2881082-2921077:1
so has part: feature:2881082-2881115:1:exon
so has part: feature:2883439-2883557:1:exon
so has part: feature:2898886-2900035:1:exon
so has part: feature:2901224-2901416:1:exon
so has part: feature:2901944-2902001:1:exon
so has part: feature:2906901-2906998:1:exon
so has part: feature:2907706-2907856:1:exon
so has part: feature:2908325-2908407:1:exon
so has part: feature:2909837-2909966:1:exon
so has part: feature:2910819-2910936:1:exon
so has part: feature:2912643-2912754:1:exon
so has part: feature:2913320-2913376:1:exon
so has part: feature:2916204-2916315:1:exon
so has part: feature:2920946-2921077:1:exon

XP_041595617.1
type: Protein
SIO_000068: ncbiprotein

position:2881082:1
position: 2881082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2921077:1
position: 2921077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2881082-2881115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2883439-2883557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2898886-2900035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2901224-2901416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2901944-2902001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2906901-2906998:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2907706-2907856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2908325-2908407:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2909837-2909966:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2910819-2910936:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2912643-2912754:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2913320-2913376:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2916204-2916315:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2920946-2921077:1:exon

IWS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: IWS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein IWS1 homolog isoform X3
translation: MDSEYYSGDQSADDGGATPVQDERDSGSDVEDDVNEQHSGSDTGSVERHSENEPSDREDGLNKRHHVTDSENDDPSNLNASDSESEELQRQKDSDSESEEHAEPPASDSENEDTNQHGSDSESEETRKLPVSDSENEELLNGHASDSENEDVRKHPASDSEVEELPKSPASDSETEDALKPQISDSESEEPQQHQASDSENEELPKPRISDSESEELPKPRVSDSESEEPQRTQASDSENEELPKPRISDSESEDPPRHQASDSENEELPKPRISDSESEGPPRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVSDSESEEPQKGPASDSETEDASRHKQKPESDDDSDGENKGEDTEMQNDSFHSDSHIDRKRIQSSDSEEEEPKRPKMDSDEDEEKVGEEEKVAKRKAAVLSDSEDEEKASKKSRVVSDADDSDSDVISDKSGKREKTLASDSEEEVGKEELSDKKNEEKDLFGSDSESGNEEENLIADIFGESGDEEEEEFTGFNQEDLEEEKSETQVKEAEDSDSDDNIKRGKHMDFLSDFEMMLQRKKSMSGKRRRNRDGGTFISDADDVVSAMIVKMNEAAEEDRQLNNQKKPALKKLTLLPTVVMHLKKQDLKETFIDSGVMSAIKEWLSPLPDRSLPALKIREELLKILQELPSVSQETLKHSGIGRAVMYLYKHPKESRSNKDMAGKLINEWSRPIFGLTSNYKGMTREEREQRDLEQMPQRRRMNSTGGQTPRRDLEKVLTGEEKALRPGDPGFCARARVPMPSNKDYVVRPKWNVEMESSRFQGTSKKGISRLDKQMRKFTDIRKKSRSAHAVKISIEGNKMPL
SIO_010081: IWS1
subclass of: SO_0000673
so part of: IWS1
location: join(2881082..2881115,2883439..2883557,2898886..2900035,2901227..2901416,2901944..2902001,2906901..2906998,2907706..2907856,2908325..2908407,2909837..2909966,2910819..2910936,2912643..2912754,2913320..2913376,2916204..2916315,2920946..2921077)
location: region:2881082-2921077:1
so has part: feature:2881082-2881115:1:exon
so has part: feature:2883439-2883557:1:exon
so has part: feature:2898886-2900035:1:exon
so has part: feature:2901227-2901416:1:exon
so has part: feature:2901944-2902001:1:exon
so has part: feature:2906901-2906998:1:exon
so has part: feature:2907706-2907856:1:exon
so has part: feature:2908325-2908407:1:exon
so has part: feature:2909837-2909966:1:exon
so has part: feature:2910819-2910936:1:exon
so has part: feature:2912643-2912754:1:exon
so has part: feature:2913320-2913376:1:exon
so has part: feature:2916204-2916315:1:exon
so has part: feature:2920946-2921077:1:exon

XP_041595619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2881082-2881115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2883439-2883557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2898886-2900035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2901227-2901416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2901944-2902001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2906901-2906998:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2907706-2907856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2908325-2908407:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2909837-2909966:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2910819-2910936:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2912643-2912754:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2913320-2913376:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2916204-2916315:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2920946-2921077:1:exon

IWS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: IWS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein IWS1 homolog isoform X2
translation: MDSEYYSGDQSDDGGATPVQDERDSGSDVEDDVNEQHSGSDTGSVERHSENEPSDREDGLNKRHHVTDSENDDPSNLNASDSESEELQRQKDSDSESEEHAEPPASDSENEDTNQHGSDSESEETRKLPVSDSENEELLNGHASDSENEDVRKHPASDSEVEELPKSPASDSETEDALKPQISDSESEEPQQHQASDSENEELPKPRISDSESEELPKPRVSDSESEEPQRTQASDSENEELPKPRISDSESEDPPRHQASDSENEELPKPRISDSESEGPPRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVSDSESEEPQKGPASDSETEDASRHKQKPESDDDSDGENKGEDTEMQNDSFHSDSHIDRKRIQSSDSEEEEPKRPKMDSDEDEEKVGEEEKVAKRKAAVLSDSEDEEKASAKKSRVVSDADDSDSDVISDKSGKREKTLASDSEEEVGKEELSDKKNEEKDLFGSDSESGNEEENLIADIFGESGDEEEEEFTGFNQEDLEEEKSETQVKEAEDSDSDDNIKRGKHMDFLSDFEMMLQRKKSMSGKRRRNRDGGTFISDADDVVSAMIVKMNEAAEEDRQLNNQKKPALKKLTLLPTVVMHLKKQDLKETFIDSGVMSAIKEWLSPLPDRSLPALKIREELLKILQELPSVSQETLKHSGIGRAVMYLYKHPKESRSNKDMAGKLINEWSRPIFGLTSNYKGMTREEREQRDLEQMPQRRRMNSTGGQTPRRDLEKVLTGEEKALRPGDPGFCARARVPMPSNKDYVVRPKWNVEMESSRFQGTSKKGISRLDKQMRKFTDIRKKSRSAHAVKISIEGNKMPL
SIO_010081: IWS1
subclass of: SO_0000673
so part of: IWS1
location: join(2881082..2881115,2883442..2883557,2898886..2900035,2901224..2901416,2901944..2902001,2906901..2906998,2907706..2907856,2908325..2908407,2909837..2909966,2910819..2910936,2912643..2912754,2913320..2913376,2916204..2916315,2920946..2921077)
location: region:2881082-2921077:1
so has part: feature:2881082-2881115:1:exon
so has part: feature:2883442-2883557:1:exon
so has part: feature:2898886-2900035:1:exon
so has part: feature:2901224-2901416:1:exon
so has part: feature:2901944-2902001:1:exon
so has part: feature:2906901-2906998:1:exon
so has part: feature:2907706-2907856:1:exon
so has part: feature:2908325-2908407:1:exon
so has part: feature:2909837-2909966:1:exon
so has part: feature:2910819-2910936:1:exon
so has part: feature:2912643-2912754:1:exon
so has part: feature:2913320-2913376:1:exon
so has part: feature:2916204-2916315:1:exon
so has part: feature:2920946-2921077:1:exon

XP_041595618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2881082-2881115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2883442-2883557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2898886-2900035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2901224-2901416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2901944-2902001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2906901-2906998:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2907706-2907856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2908325-2908407:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2909837-2909966:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2910819-2910936:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2912643-2912754:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2913320-2913376:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2916204-2916315:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2920946-2921077:1:exon

IWS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: IWS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein IWS1 homolog isoform X4
translation: MDSEYYSGDQSADDGGATPVQDERDSGSDVEDDVNEQHSGSDTGSVERHSENEPSDREDGLNKRHHVTDSENDDPSNLNASDSESEELQRQKDSDSESEEHAEPPASDSENEDTNQHGSDSESEETRKLPVSDSENEELLNGHASDSENEDVRKHPASDSEVEELPKSPASDSETEDALKPQISDSESEEPQQHQASDSENEELPKPRISDSESEELPKPRVSDSESEEPQRTQASDSENEELPKPRISDSESEDPPRHQASDSENEELPKPRISDSESEGPPRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVSDSESEEPQKGPASDSETEDASRHKQKPESDDDSDGENKGEDTEMQNDSFHSDSHIDRKRIQSSDSEEEEPKRPKMDSDEDEEKVGEEEKVAKRKAAVLSDSEDEEKASAKKSRVVSDADDSDSDVISDKSGKREKTLASDSEEEVGKEELSDKKNEEKDLFGSDSESGNEEENLIADIFGESGDEEEEEFTGFNQEDLEEEKSETQVKEAEDSDSDDNIKRGKHMDFLSDFEMMLQRKKSMSGKRRRNRDGGTFISDADDVVSAMIVKMNEAAEEDRQLNNQKKPALKKLTLLPTVVMHLKKQDLKETFIDSGVMSAIKEWLSPLPDRSLPALKIREELLKILQELPSVSQETLKHSGIGRAVMYLYKHPKESRSNKDMAGKLINEWSRPIFGLTSNYKGMTREEREQRDLEQMPQRRRMNSTGGQTPRRDLEKVLTGEEKALRPGDPGFCARARVPMPSNKDYVVRPKWNVEMESSRPGILKKGLSRLEKHKRRFAEQKRLSKVHRAVKFSIEGNRMPL
SIO_010081: IWS1
subclass of: SO_0000673
so part of: IWS1
location: join(2881082..2881115,2883439..2883557,2898886..2900035,2901224..2901416,2901944..2902001,2906901..2906998,2907706..2907856,2908325..2908407,2909837..2909966,2910819..2910936,2912643..2912754,2913320..2913376,2916204..2916315,2916771..2916899)
location: region:2881082-2916899:1
so has part: feature:2881082-2881115:1:exon
so has part: feature:2883439-2883557:1:exon
so has part: feature:2898886-2900035:1:exon
so has part: feature:2901224-2901416:1:exon
so has part: feature:2901944-2902001:1:exon
so has part: feature:2906901-2906998:1:exon
so has part: feature:2907706-2907856:1:exon
so has part: feature:2908325-2908407:1:exon
so has part: feature:2909837-2909966:1:exon
so has part: feature:2910819-2910936:1:exon
so has part: feature:2912643-2912754:1:exon
so has part: feature:2913320-2913376:1:exon
so has part: feature:2916204-2916315:1:exon
so has part: feature:2916771-2916899:1:exon

XP_041595621.1
type: Protein
SIO_000068: ncbiprotein

position:2916899:1
position: 2916899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2881082-2881115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2883439-2883557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2898886-2900035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2901224-2901416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2901944-2902001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2906901-2906998:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2907706-2907856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2908325-2908407:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2909837-2909966:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2910819-2910936:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2912643-2912754:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2913320-2913376:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2916204-2916315:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2916771-2916899:1:exon

LOC121482107
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2922874..2927998)
location: region:2922874-2927998:-1
so has part: feature:2922874-2927998:-1:exon

121482107
type: Gene
SIO_000068: ncbigene

position:2922874:-1
position: 2922874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2927998:-1
position: 2927998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2922874-2927998:-1:exon

LOC121482107
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482107
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121482107
subclass of: SO_0000673
so part of: LOC121482107
location: complement(2922874..2925256)
location: region:2922874-2925256:-1
so has part: feature:2922874-2925256:-1:exon

position:2925256:-1
position: 2925256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2922874-2925256:-1:exon

LOC121482107
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482107
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121482107
subclass of: SO_0000673
so part of: LOC121482107
location: complement(2927837..2927998)
location: region:2927837-2927998:-1
so has part: feature:2927837-2927998:-1:exon

position:2927837:-1
position: 2927837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2927837-2927998:-1:exon

LOC121482108
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2967083..2968043)
location: region:2967083-2968043:-1
so has part: feature:2967083-2968043:-1:exon

121482108
type: Gene
SIO_000068: ncbigene

position:2967083:-1
position: 2967083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2968043:-1
position: 2968043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2967083-2968043:-1:exon

LOC121482108
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482108
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC121482108
subclass of: SO_0000673
so part of: LOC121482108
location: complement(2967083..2967458)
location: region:2967083-2967458:-1
so has part: feature:2967083-2967458:-1:exon

position:2967458:-1
position: 2967458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2967083-2967458:-1:exon

LOC121482108
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482108
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC121482108
subclass of: SO_0000673
so part of: LOC121482108
location: complement(2967646..2968043)
location: region:2967646-2968043:-1
so has part: feature:2967646-2968043:-1:exon

position:2967646:-1
position: 2967646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2967646-2968043:-1:exon

PROC
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: PROC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2978411..2988026)
location: region:2978411-2988026:-1
so has part: feature:2978411-2988026:-1:exon
subclass of: SO_0000010

121482037
type: Gene
SIO_000068: ncbigene

position:2978411:-1
position: 2978411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2988026:-1
position: 2988026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2978411-2988026:-1:exon

PROC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: PROC
product: protein C, inactivator of coagulation factors Va and VIIIa
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739802.1
SIO_010081: PROC
subclass of: SO_0000673
so part of: PROC
location: complement(join(2978411..2979091,2980219..2980336,2981224..2981363,2983312..2983446,2983562..2983699,2983778..2983802,2985178..2985344,2986557..2986751,2987966..2988026))
location: region:2978411-2988026:-1
so has part: feature:2987966-2988026:-1:exon
so has part: feature:2986557-2986751:-1:exon
so has part: feature:2985178-2985344:-1:exon
so has part: feature:2983778-2983802:-1:exon
so has part: feature:2983562-2983699:-1:exon
so has part: feature:2983312-2983446:-1:exon
so has part: feature:2981224-2981363:-1:exon
so has part: feature:2980219-2980336:-1:exon
so has part: feature:2978411-2979091:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2987966-2988026:-1:exon

position:2987966:-1
position: 2987966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2986557-2986751:-1:exon

position:2986557:-1
position: 2986557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2986751:-1
position: 2986751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2985178-2985344:-1:exon

position:2985178:-1
position: 2985178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2985344:-1
position: 2985344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2983778-2983802:-1:exon

position:2983778:-1
position: 2983778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2983802:-1
position: 2983802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2983562-2983699:-1:exon

position:2983562:-1
position: 2983562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2983699:-1
position: 2983699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2983312-2983446:-1:exon

position:2983312:-1
position: 2983312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2983446:-1
position: 2983446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2981224-2981363:-1:exon

position:2981224:-1
position: 2981224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2981363:-1
position: 2981363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2980219-2980336:-1:exon

position:2980219:-1
position: 2980219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2980336:-1
position: 2980336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2978411-2979091:-1:exon

position:2979091:-1
position: 2979091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PROC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: PROC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin K-dependent protein C
translation: MAVGQQPSSFFPAHPRIPQPQPSRSAPIWGPGSRQNRSWWGCWKLRSPPQTGVSNSRMWQLASLSLLLTIWGTCSTAAPPGSVFSSSESAHQVLRIRKRANSFLEEIRAGSLERECMEEICDFEEAKEIFQNVDDTLAYWSKYVDGDQCAALPPGHACPSACCGRGSCIDGIGAFHCDCGRGWEGRFCQREVSHSNCSRDNGGCSHYCLEEEGGRRCSCAPGYRLGDDHLHCRPAVKFPCGRPGKQMEKKRKHLKRDTNQTDQIDPRLVNGKVTRRGESPWQVVLLDSKKKLACGAVLIHTSWVLTAAHCMEDSKKLIVRLGEYDLRRWEKGEMDVDIKEVLIHPNYSKSTTDNDIALLHLAQPASFSETIVPICLPDSGLAERELTQVGQETVVTGWGYRSETKRNRTFVLNFINIPVAPHNECIQAMYNMISENMLCAGILGDPRDACEGDSGGPMVTSFRGTWFLVGLVSWGEGCGRLHNYGIYTKVSRYLDWIHSHIRGEEASLENQVP
SIO_010081: PROC
subclass of: SO_0000673
so part of: PROC
location: complement(join(2978514..2979091,2980219..2980336,2981224..2981363,2983312..2983446,2983562..2983699,2983778..2983802,2985178..2985344,2986557..2986751,2987966..2988011))
location: region:2978514-2988011:-1
so has part: feature:2987966-2988011:-1:exon
so has part: feature:2986557-2986751:-1:exon
so has part: feature:2985178-2985344:-1:exon
so has part: feature:2983778-2983802:-1:exon
so has part: feature:2983562-2983699:-1:exon
so has part: feature:2983312-2983446:-1:exon
so has part: feature:2981224-2981363:-1:exon
so has part: feature:2980219-2980336:-1:exon
so has part: feature:2978514-2979091:-1:exon

XP_041595736.1
type: Protein
SIO_000068: ncbiprotein

position:2978514:-1
position: 2978514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2988011:-1
position: 2988011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2987966-2988011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2986557-2986751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2985178-2985344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2983778-2983802:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2983562-2983699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2983312-2983446:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2981224-2981363:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2980219-2980336:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2978514-2979091:-1:exon

LOC121482039
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482039
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2986986..2990927
location: region:2986986-2990927:1
so has part: feature:2986986-2990927:1:exon
subclass of: SO_0000011

121482039
type: Gene
SIO_000068: ncbigene

position:2986986:1
position: 2986986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2990927:1
position: 2990927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2986986-2990927:1:exon

LOC121482039
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: lncRNA
gene: LOC121482039
product: uncharacterized LOC121482039, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005985497.1
SIO_010081: LOC121482039
subclass of: SO_0000673
so part of: LOC121482039
location: join(2986986..2987108,2987734..2988028,2990714..2990927)
location: region:2986986-2990927:1
so has part: feature:2986986-2987108:1:exon
so has part: feature:2987734-2988028:1:exon
so has part: feature:2990714-2990927:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2986986-2987108:1:exon

position:2987108:1
position: 2987108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2987734-2988028:1:exon

position:2987734:1
position: 2987734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2988028:1
position: 2988028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2990714-2990927:1:exon

position:2990714:1
position: 2990714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121482039
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: lncRNA
gene: LOC121482039
product: uncharacterized LOC121482039, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005985498.1
SIO_010081: LOC121482039
subclass of: SO_0000673
so part of: LOC121482039
location: join(2986986..2987108,2987866..2988028,2990714..2990927)
location: region:2986986-2990927:1
so has part: feature:2986986-2987108:1:exon
so has part: feature:2987866-2988028:1:exon
so has part: feature:2990714-2990927:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2986986-2987108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2987866-2988028:1:exon

position:2987866:1
position: 2987866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2990714-2990927:1:exon

LOC121482038
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2992496..2995254
location: region:2992496-2995254:1
so has part: feature:2992496-2995254:1:exon
subclass of: SO_0000011

121482038
type: Gene
SIO_000068: ncbigene

position:2992496:1
position: 2992496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2995254:1
position: 2995254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2992496-2995254:1:exon

LOC121482038
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: lncRNA
gene: LOC121482038
product: uncharacterized LOC121482038, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005985496.1
SIO_010081: LOC121482038
subclass of: SO_0000673
so part of: LOC121482038
location: join(2992496..2992611,2992870..2993011,2993660..2993771,2994538..2995254)
location: region:2992496-2995254:1
so has part: feature:2992496-2992611:1:exon
so has part: feature:2992870-2993011:1:exon
so has part: feature:2993660-2993771:1:exon
so has part: feature:2994538-2995254:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2992496-2992611:1:exon

position:2992611:1
position: 2992611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2992870-2993011:1:exon

position:2992870:1
position: 2992870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2993011:1
position: 2993011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2993660-2993771:1:exon

position:2993660:1
position: 2993660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2993771:1
position: 2993771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2994538-2995254:1:exon

position:2994538:1
position: 2994538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121482038
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: lncRNA
gene: LOC121482038
product: uncharacterized LOC121482038, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005985495.1
SIO_010081: LOC121482038
subclass of: SO_0000673
so part of: LOC121482038
location: join(2992513..2992611,2992777..2993011,2993660..2993771,2994538..2995254)
location: region:2992513-2995254:1
so has part: feature:2992513-2992611:1:exon
so has part: feature:2992777-2993011:1:exon
so has part: feature:2993660-2993771:1:exon
so has part: feature:2994538-2995254:1:exon

position:2992513:1
position: 2992513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2992513-2992611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2992777-2993011:1:exon

position:2992777:1
position: 2992777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2993660-2993771:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2994538-2995254:1:exon

LOC121482038
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: lncRNA
gene: LOC121482038
product: uncharacterized LOC121482038, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005985494.1
SIO_010081: LOC121482038
subclass of: SO_0000673
so part of: LOC121482038
location: join(2992632..2993011,2993660..2993771,2994538..2995254)
location: region:2992632-2995254:1
so has part: feature:2992632-2993011:1:exon
so has part: feature:2993660-2993771:1:exon
so has part: feature:2994538-2995254:1:exon

position:2992632:1
position: 2992632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2992632-2993011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2993660-2993771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2994538-2995254:1:exon

LOC121481973
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121481973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3006984..3014397)
location: region:3006984-3014397:-1
so has part: feature:3006984-3014397:-1:exon

121481973
type: Gene
SIO_000068: ncbigene

position:3006984:-1
position: 3006984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3014397:-1
position: 3014397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3006984-3014397:-1:exon

LOC121481973
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121481973
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pseudo: true
SIO_010081: LOC121481973
subclass of: SO_0000673
so part of: LOC121481973
location: complement(3006984..3008159)
location: region:3006984-3008159:-1
so has part: feature:3006984-3008159:-1:exon

position:3008159:-1
position: 3008159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3006984-3008159:-1:exon

MAP3K2
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: MAP3K2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3011908..3105334
location: region:3011908-3105334:1
so has part: feature:3011908-3105334:1:exon
subclass of: SO_0000010

121481972
type: Gene
SIO_000068: ncbigene

position:3011908:1
position: 3011908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3105334:1
position: 3105334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3011908-3105334:1:exon

MAP3K2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: MAP3K2
product: mitogen-activated protein kinase kinase kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041739690.1
SIO_010081: MAP3K2
subclass of: SO_0000673
so part of: MAP3K2
location: join(3011908..3012031,3057482..3057550,3059651..3059769,3060401..3060441,3061832..3061931,3067229..3067342,3067775..3067862,3072666..3072796,3073638..3073717,3075342..3075409,3075599..3075694,3076695..3076901,3077893..3078041,3078420..3078551,3083581..3083710,3095340..3095517,3096239..3105334)
location: region:3011908-3105334:1
so has part: feature:3011908-3012031:1:exon
so has part: feature:3057482-3057550:1:exon
so has part: feature:3059651-3059769:1:exon
so has part: feature:3060401-3060441:1:exon
so has part: feature:3061832-3061931:1:exon
so has part: feature:3067229-3067342:1:exon
so has part: feature:3067775-3067862:1:exon
so has part: feature:3072666-3072796:1:exon
so has part: feature:3073638-3073717:1:exon
so has part: feature:3075342-3075409:1:exon
so has part: feature:3075599-3075694:1:exon
so has part: feature:3076695-3076901:1:exon
so has part: feature:3077893-3078041:1:exon
so has part: feature:3078420-3078551:1:exon
so has part: feature:3083581-3083710:1:exon
so has part: feature:3095340-3095517:1:exon
so has part: feature:3096239-3105334:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3011908-3012031:1:exon

position:3012031:1
position: 3012031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3057482-3057550:1:exon

position:3057482:1
position: 3057482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3057550:1
position: 3057550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3059651-3059769:1:exon

position:3059651:1
position: 3059651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3059769:1
position: 3059769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3060401-3060441:1:exon

position:3060401:1
position: 3060401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3060441:1
position: 3060441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3061832-3061931:1:exon

position:3061832:1
position: 3061832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3061931:1
position: 3061931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3067229-3067342:1:exon

position:3067229:1
position: 3067229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3067342:1
position: 3067342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3067775-3067862:1:exon

position:3067775:1
position: 3067775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3067862:1
position: 3067862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3072666-3072796:1:exon

position:3072666:1
position: 3072666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3072796:1
position: 3072796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3073638-3073717:1:exon

position:3073638:1
position: 3073638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3073717:1
position: 3073717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3075342-3075409:1:exon

position:3075342:1
position: 3075342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3075409:1
position: 3075409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3075599-3075694:1:exon

position:3075599:1
position: 3075599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3075694:1
position: 3075694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3076695-3076901:1:exon

position:3076695:1
position: 3076695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3076901:1
position: 3076901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3077893-3078041:1:exon

position:3077893:1
position: 3077893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3078041:1
position: 3078041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3078420-3078551:1:exon

position:3078420:1
position: 3078420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3078551:1
position: 3078551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3083581-3083710:1:exon

position:3083581:1
position: 3083581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3083710:1
position: 3083710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3095340-3095517:1:exon

position:3095340:1
position: 3095340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3095517:1
position: 3095517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3096239-3105334:1:exon

position:3096239:1
position: 3096239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAP3K2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: MAP3K2
product: mitogen-activated protein kinase kinase kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041739692.1
SIO_010081: MAP3K2
subclass of: SO_0000673
so part of: MAP3K2
location: join(3011908..3012031,3057482..3057550,3059651..3059769,3060401..3060441,3061832..3061931,3067229..3067342,3067775..3067862,3072666..3072796,3073638..3073717,3075342..3075409,3075602..3075694,3076695..3076901,3077893..3078041,3078420..3078551,3083581..3083710,3095340..3095517,3096239..3105334)
location: region:3011908-3105334:1
so has part: feature:3011908-3012031:1:exon
so has part: feature:3057482-3057550:1:exon
so has part: feature:3059651-3059769:1:exon
so has part: feature:3060401-3060441:1:exon
so has part: feature:3061832-3061931:1:exon
so has part: feature:3067229-3067342:1:exon
so has part: feature:3067775-3067862:1:exon
so has part: feature:3072666-3072796:1:exon
so has part: feature:3073638-3073717:1:exon
so has part: feature:3075342-3075409:1:exon
so has part: feature:3075602-3075694:1:exon
so has part: feature:3076695-3076901:1:exon
so has part: feature:3077893-3078041:1:exon
so has part: feature:3078420-3078551:1:exon
so has part: feature:3083581-3083710:1:exon
so has part: feature:3095340-3095517:1:exon
so has part: feature:3096239-3105334:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3011908-3012031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3057482-3057550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3059651-3059769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3060401-3060441:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3061832-3061931:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3067229-3067342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3067775-3067862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3072666-3072796:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3073638-3073717:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3075342-3075409:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3075602-3075694:1:exon

position:3075602:1
position: 3075602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3076695-3076901:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3077893-3078041:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3078420-3078551:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3083581-3083710:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3095340-3095517:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3096239-3105334:1:exon

MAP3K2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: MAP3K2
product: mitogen-activated protein kinase kinase kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739691.1
SIO_010081: MAP3K2
subclass of: SO_0000673
so part of: MAP3K2
location: join(3011953..3012031,3012372..3012497,3057482..3057550,3059651..3059769,3060401..3060441,3061832..3061931,3067229..3067342,3067775..3067862,3072666..3072796,3073638..3073717,3075342..3075409,3075599..3075694,3076695..3076901,3077893..3078041,3078420..3078551,3083581..3083710,3095340..3095517,3096239..3105334)
location: region:3011953-3105334:1
so has part: feature:3011953-3012031:1:exon
so has part: feature:3012372-3012497:1:exon
so has part: feature:3057482-3057550:1:exon
so has part: feature:3059651-3059769:1:exon
so has part: feature:3060401-3060441:1:exon
so has part: feature:3061832-3061931:1:exon
so has part: feature:3067229-3067342:1:exon
so has part: feature:3067775-3067862:1:exon
so has part: feature:3072666-3072796:1:exon
so has part: feature:3073638-3073717:1:exon
so has part: feature:3075342-3075409:1:exon
so has part: feature:3075599-3075694:1:exon
so has part: feature:3076695-3076901:1:exon
so has part: feature:3077893-3078041:1:exon
so has part: feature:3078420-3078551:1:exon
so has part: feature:3083581-3083710:1:exon
so has part: feature:3095340-3095517:1:exon
so has part: feature:3096239-3105334:1:exon

position:3011953:1
position: 3011953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3011953-3012031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3012372-3012497:1:exon

position:3012372:1
position: 3012372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3012497:1
position: 3012497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3057482-3057550:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3059651-3059769:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3060401-3060441:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3061832-3061931:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3067229-3067342:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3067775-3067862:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3072666-3072796:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3073638-3073717:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3075342-3075409:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3075599-3075694:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3076695-3076901:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3077893-3078041:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3078420-3078551:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3083581-3083710:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3095340-3095517:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3096239-3105334:1:exon

LOC121481973
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121481973
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pseudo: true
SIO_010081: LOC121481973
subclass of: SO_0000673
so part of: LOC121481973
location: complement(3012240..3014397)
location: region:3012240-3014397:-1
so has part: feature:3012240-3014397:-1:exon

position:3012240:-1
position: 3012240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3012240-3014397:-1:exon

MAP3K2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: MAP3K2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 2 isoform X1
translation: MMDDQQALNSIMQDLAVLHKASRPALSLQETRKTKSSSPTKQNDVRVKFEHRGEKRILQFSRPVKLEDLRSKAKIAFGQSMDLHYTNNELVIPLTTQDDLDKAVELLDRSIHMKSLKILLVINGSTQATNLEPLPSLEDLDNTVFGAERKKRLSIIGPTSRDRSSPPPGYIPDELHQVARNGSFTSINSEGEFIPESMDQMLDPLSLSSPENSGSGSCPSLDSPLDGESYPKSRMPRAQSYPDNHQEFSVDYDNPIFEKFGKGGTYPRRYHVSYHHQDYNDGRKTFPRARRTQGTSFRSPVSFSPTDHSLSTSSGSSIFTPEYDDSRIRRRGSDIDNPTLTVMDISPPSRSPRAPTNWRLGKLLGQGAFGRVYLCYDVDTGRELAVKQVQFDPDSPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPQEKTLSIFMEYMPGGSIKDQLKAYGALTENVTRKYTRQILEGVHYLHSNMIVHRDIKGANILRDSTGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPKLPPHVSDYTRDFLKRIFIEAKLRPSADELLRHMFVHYH
SIO_010081: MAP3K2
subclass of: SO_0000673
so part of: MAP3K2
location: join(3057544..3057550,3059651..3059769,3060401..3060441,3061832..3061931,3067229..3067342,3067775..3067862,3072666..3072796,3073638..3073717,3075342..3075409,3075599..3075694,3076695..3076901,3077893..3078041,3078420..3078551,3083581..3083710,3095340..3095517,3096239..3096464)
location: region:3057544-3096464:1
so has part: feature:3057544-3057550:1:exon
so has part: feature:3059651-3059769:1:exon
so has part: feature:3060401-3060441:1:exon
so has part: feature:3061832-3061931:1:exon
so has part: feature:3067229-3067342:1:exon
so has part: feature:3067775-3067862:1:exon
so has part: feature:3072666-3072796:1:exon
so has part: feature:3073638-3073717:1:exon
so has part: feature:3075342-3075409:1:exon
so has part: feature:3075599-3075694:1:exon
so has part: feature:3076695-3076901:1:exon
so has part: feature:3077893-3078041:1:exon
so has part: feature:3078420-3078551:1:exon
so has part: feature:3083581-3083710:1:exon
so has part: feature:3095340-3095517:1:exon
so has part: feature:3096239-3096464:1:exon

XP_041595624.1
type: Protein
SIO_000068: ncbiprotein

position:3057544:1
position: 3057544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3096464:1
position: 3096464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3057544-3057550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3059651-3059769:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3060401-3060441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3061832-3061931:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3067229-3067342:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3067775-3067862:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3072666-3072796:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3073638-3073717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3075342-3075409:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3075599-3075694:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3076695-3076901:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3077893-3078041:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3078420-3078551:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3083581-3083710:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3095340-3095517:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3096239-3096464:1:exon

MAP3K2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: MAP3K2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 2 isoform X1
translation: MMDDQQALNSIMQDLAVLHKASRPALSLQETRKTKSSSPTKQNDVRVKFEHRGEKRILQFSRPVKLEDLRSKAKIAFGQSMDLHYTNNELVIPLTTQDDLDKAVELLDRSIHMKSLKILLVINGSTQATNLEPLPSLEDLDNTVFGAERKKRLSIIGPTSRDRSSPPPGYIPDELHQVARNGSFTSINSEGEFIPESMDQMLDPLSLSSPENSGSGSCPSLDSPLDGESYPKSRMPRAQSYPDNHQEFSVDYDNPIFEKFGKGGTYPRRYHVSYHHQDYNDGRKTFPRARRTQGTSFRSPVSFSPTDHSLSTSSGSSIFTPEYDDSRIRRRGSDIDNPTLTVMDISPPSRSPRAPTNWRLGKLLGQGAFGRVYLCYDVDTGRELAVKQVQFDPDSPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPQEKTLSIFMEYMPGGSIKDQLKAYGALTENVTRKYTRQILEGVHYLHSNMIVHRDIKGANILRDSTGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPKLPPHVSDYTRDFLKRIFIEAKLRPSADELLRHMFVHYH
SIO_010081: MAP3K2
subclass of: SO_0000673
so part of: MAP3K2
location: join(3057544..3057550,3059651..3059769,3060401..3060441,3061832..3061931,3067229..3067342,3067775..3067862,3072666..3072796,3073638..3073717,3075342..3075409,3075599..3075694,3076695..3076901,3077893..3078041,3078420..3078551,3083581..3083710,3095340..3095517,3096239..3096464)
location: region:3057544-3096464:1
so has part: feature:3057544-3057550:1:exon
so has part: feature:3059651-3059769:1:exon
so has part: feature:3060401-3060441:1:exon
so has part: feature:3061832-3061931:1:exon
so has part: feature:3067229-3067342:1:exon
so has part: feature:3067775-3067862:1:exon
so has part: feature:3072666-3072796:1:exon
so has part: feature:3073638-3073717:1:exon
so has part: feature:3075342-3075409:1:exon
so has part: feature:3075599-3075694:1:exon
so has part: feature:3076695-3076901:1:exon
so has part: feature:3077893-3078041:1:exon
so has part: feature:3078420-3078551:1:exon
so has part: feature:3083581-3083710:1:exon
so has part: feature:3095340-3095517:1:exon
so has part: feature:3096239-3096464:1:exon

XP_041595625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3057544-3057550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3059651-3059769:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3060401-3060441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3061832-3061931:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3067229-3067342:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3067775-3067862:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3072666-3072796:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3073638-3073717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3075342-3075409:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3075599-3075694:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3076695-3076901:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3077893-3078041:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3078420-3078551:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3083581-3083710:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3095340-3095517:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3096239-3096464:1:exon

MAP3K2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: MAP3K2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 2 isoform X2
translation: MMDDQQALNSIMQDLAVLHKASRPALSLQETRKTKSSSPTKQNDVRVKFEHRGEKRILQFSRPVKLEDLRSKAKIAFGQSMDLHYTNNELVIPLTTQDDLDKAVELLDRSIHMKSLKILLVINGSTQATNLEPLPSLEDLDNTVFGAERKKRLSIIGPTSRDRSSPPPGYIPDELHQVARNGSFTSINSEGEFIPESMDQMLDPLSLSSPENSGSGSCPSLDSPLDGESYPKSRMPRAQSYPDNHQEFSDYDNPIFEKFGKGGTYPRRYHVSYHHQDYNDGRKTFPRARRTQGTSFRSPVSFSPTDHSLSTSSGSSIFTPEYDDSRIRRRGSDIDNPTLTVMDISPPSRSPRAPTNWRLGKLLGQGAFGRVYLCYDVDTGRELAVKQVQFDPDSPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPQEKTLSIFMEYMPGGSIKDQLKAYGALTENVTRKYTRQILEGVHYLHSNMIVHRDIKGANILRDSTGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPKLPPHVSDYTRDFLKRIFIEAKLRPSADELLRHMFVHYH
SIO_010081: MAP3K2
subclass of: SO_0000673
so part of: MAP3K2
location: join(3057544..3057550,3059651..3059769,3060401..3060441,3061832..3061931,3067229..3067342,3067775..3067862,3072666..3072796,3073638..3073717,3075342..3075409,3075602..3075694,3076695..3076901,3077893..3078041,3078420..3078551,3083581..3083710,3095340..3095517,3096239..3096464)
location: region:3057544-3096464:1
so has part: feature:3057544-3057550:1:exon
so has part: feature:3059651-3059769:1:exon
so has part: feature:3060401-3060441:1:exon
so has part: feature:3061832-3061931:1:exon
so has part: feature:3067229-3067342:1:exon
so has part: feature:3067775-3067862:1:exon
so has part: feature:3072666-3072796:1:exon
so has part: feature:3073638-3073717:1:exon
so has part: feature:3075342-3075409:1:exon
so has part: feature:3075602-3075694:1:exon
so has part: feature:3076695-3076901:1:exon
so has part: feature:3077893-3078041:1:exon
so has part: feature:3078420-3078551:1:exon
so has part: feature:3083581-3083710:1:exon
so has part: feature:3095340-3095517:1:exon
so has part: feature:3096239-3096464:1:exon

XP_041595626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3057544-3057550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3059651-3059769:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3060401-3060441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3061832-3061931:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3067229-3067342:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3067775-3067862:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3072666-3072796:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3073638-3073717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3075342-3075409:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3075602-3075694:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3076695-3076901:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3077893-3078041:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3078420-3078551:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3083581-3083710:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3095340-3095517:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3096239-3096464:1:exon

ERCC3
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: ERCC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3113704..3146950
location: region:3113704-3146950:1
so has part: feature:3113704-3146950:1:exon
subclass of: SO_0000010

121481971
type: Gene
SIO_000068: ncbigene

position:3113704:1
position: 3113704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3146950:1
position: 3146950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3113704-3146950:1:exon

ERCC3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 494514
gene: ERCC3
product: ERCC excision repair 3, TFIIH core complex helicase subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005985469.1
SIO_010081: ERCC3
so part of: ERCC3
location: join(3113704..3113821,3114115..3114320,3115179..3115415,3117835..3117884,3118257..3118392,3118588..3118752,3119253..3119457,3121014..3121328,3126700..3126884,3130501..3130703,3131469..3131565,3133070..3133185,3136187..3136308,3138229..3138366)
location: region:3113704-3138366:1
so has part: feature:3113704-3113821:1:exon
so has part: feature:3114115-3114320:1:exon
so has part: feature:3115179-3115415:1:exon
so has part: feature:3117835-3117884:1:exon
so has part: feature:3118257-3118392:1:exon
so has part: feature:3118588-3118752:1:exon
so has part: feature:3119253-3119457:1:exon
so has part: feature:3121014-3121328:1:exon
so has part: feature:3126700-3126884:1:exon
so has part: feature:3130501-3130703:1:exon
so has part: feature:3131469-3131565:1:exon
so has part: feature:3133070-3133185:1:exon
so has part: feature:3136187-3136308:1:exon
so has part: feature:3138229-3138366:1:exon

position:3138366:1
position: 3138366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3113704-3113821:1:exon

position:3113821:1
position: 3113821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3114115-3114320:1:exon

position:3114115:1
position: 3114115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3114320:1
position: 3114320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3115179-3115415:1:exon

position:3115179:1
position: 3115179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3115415:1
position: 3115415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3117835-3117884:1:exon

position:3117835:1
position: 3117835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3117884:1
position: 3117884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3118257-3118392:1:exon

position:3118257:1
position: 3118257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3118392:1
position: 3118392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3118588-3118752:1:exon

position:3118588:1
position: 3118588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3118752:1
position: 3118752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3119253-3119457:1:exon

position:3119253:1
position: 3119253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3119457:1
position: 3119457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3121014-3121328:1:exon

position:3121014:1
position: 3121014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3121328:1
position: 3121328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3126700-3126884:1:exon

position:3126700:1
position: 3126700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3126884:1
position: 3126884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3130501-3130703:1:exon

position:3130501:1
position: 3130501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3130703:1
position: 3130703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3131469-3131565:1:exon

position:3131469:1
position: 3131469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3131565:1
position: 3131565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3133070-3133185:1:exon

position:3133070:1
position: 3133070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3133185:1
position: 3133185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3136187-3136308:1:exon

position:3136187:1
position: 3136187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3136308:1
position: 3136308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3138229-3138366:1:exon

position:3138229:1
position: 3138229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERCC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ERCC3
product: ERCC excision repair 3, TFIIH core complex helicase subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739689.1
SIO_010081: ERCC3
subclass of: SO_0000673
so part of: ERCC3
location: join(3113705..3113821,3114115..3114320,3115179..3115415,3117835..3117884,3118257..3118392,3118588..3118752,3119253..3119457,3121014..3121328,3126700..3126884,3130501..3130703,3131469..3131565,3133070..3133187,3136190..3136308,3138229..3138381,3140003..3140181,3146794..3146950)
location: region:3113705-3146950:1
so has part: feature:3113705-3113821:1:exon
so has part: feature:3114115-3114320:1:exon
so has part: feature:3115179-3115415:1:exon
so has part: feature:3117835-3117884:1:exon
so has part: feature:3118257-3118392:1:exon
so has part: feature:3118588-3118752:1:exon
so has part: feature:3119253-3119457:1:exon
so has part: feature:3121014-3121328:1:exon
so has part: feature:3126700-3126884:1:exon
so has part: feature:3130501-3130703:1:exon
so has part: feature:3131469-3131565:1:exon
so has part: feature:3133070-3133187:1:exon
so has part: feature:3136190-3136308:1:exon
so has part: feature:3138229-3138381:1:exon
so has part: feature:3140003-3140181:1:exon
so has part: feature:3146794-3146950:1:exon

position:3113705:1
position: 3113705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3113705-3113821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3114115-3114320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3115179-3115415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3117835-3117884:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3118257-3118392:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3118588-3118752:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3119253-3119457:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3121014-3121328:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3126700-3126884:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3130501-3130703:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3131469-3131565:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3133070-3133187:1:exon

position:3133187:1
position: 3133187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3136190-3136308:1:exon

position:3136190:1
position: 3136190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3138229-3138381:1:exon

position:3138381:1
position: 3138381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3140003-3140181:1:exon

position:3140003:1
position: 3140003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3140181:1
position: 3140181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3146794-3146950:1:exon

position:3146794:1
position: 3146794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERCC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ERCC3
product: ERCC excision repair 3, TFIIH core complex helicase subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739688.1
SIO_010081: ERCC3
subclass of: SO_0000673
so part of: ERCC3
location: join(3113705..3113821,3114115..3114320,3115179..3115415,3117835..3117884,3118257..3118392,3118588..3118752,3119253..3119457,3121014..3121328,3126700..3126884,3130501..3130703,3131469..3131565,3133070..3133187,3136190..3136308,3138229..3138381,3140003..3140456)
location: region:3113705-3140456:1
so has part: feature:3113705-3113821:1:exon
so has part: feature:3114115-3114320:1:exon
so has part: feature:3115179-3115415:1:exon
so has part: feature:3117835-3117884:1:exon
so has part: feature:3118257-3118392:1:exon
so has part: feature:3118588-3118752:1:exon
so has part: feature:3119253-3119457:1:exon
so has part: feature:3121014-3121328:1:exon
so has part: feature:3126700-3126884:1:exon
so has part: feature:3130501-3130703:1:exon
so has part: feature:3131469-3131565:1:exon
so has part: feature:3133070-3133187:1:exon
so has part: feature:3136190-3136308:1:exon
so has part: feature:3138229-3138381:1:exon
so has part: feature:3140003-3140456:1:exon

position:3140456:1
position: 3140456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3113705-3113821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3114115-3114320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3115179-3115415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3117835-3117884:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3118257-3118392:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3118588-3118752:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3119253-3119457:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3121014-3121328:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3126700-3126884:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3130501-3130703:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3131469-3131565:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3133070-3133187:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3136190-3136308:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3138229-3138381:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3140003-3140456:1:exon

ERCC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ERCC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription and DNA repair factor IIH helicase subunit XPB
translation: MGKRDRDKKKAKKRHYEDEEEDEDDVPGNDSQEAVPSAAGKQVDESGTKVDEYGAKDYRLQMPLKDDHASRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTAYSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESSHPDVIQHLLQDPVIRECRLRNSEGEATELITETFMSKSAIAKTAEGSGGPSTSRVTDPQGKSDIPTDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEDEELAFSTREEQQQLLQKVLAATDLDAEEEVVAGEFGSKSSQVSRRFGTMSSMSGADDTVYMEYHSARSKASTKHVHPLFKRFRK
SIO_010081: ERCC3
subclass of: SO_0000673
so part of: ERCC3
location: join(3113803..3113821,3114115..3114320,3115179..3115415,3117835..3117884,3118257..3118392,3118588..3118752,3119253..3119457,3121014..3121328,3126700..3126884,3130501..3130703,3131469..3131565,3133070..3133187,3136190..3136308,3138229..3138381,3140003..3140134)
location: region:3113803-3140134:1
so has part: feature:3113803-3113821:1:exon
so has part: feature:3114115-3114320:1:exon
so has part: feature:3115179-3115415:1:exon
so has part: feature:3117835-3117884:1:exon
so has part: feature:3118257-3118392:1:exon
so has part: feature:3118588-3118752:1:exon
so has part: feature:3119253-3119457:1:exon
so has part: feature:3121014-3121328:1:exon
so has part: feature:3126700-3126884:1:exon
so has part: feature:3130501-3130703:1:exon
so has part: feature:3131469-3131565:1:exon
so has part: feature:3133070-3133187:1:exon
so has part: feature:3136190-3136308:1:exon
so has part: feature:3138229-3138381:1:exon
so has part: feature:3140003-3140134:1:exon

XP_041595622.1
type: Protein
SIO_000068: ncbiprotein

position:3113803:1
position: 3113803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3140134:1
position: 3140134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3113803-3113821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3114115-3114320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3115179-3115415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3117835-3117884:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3118257-3118392:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3118588-3118752:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3119253-3119457:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3121014-3121328:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3126700-3126884:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3130501-3130703:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3131469-3131565:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3133070-3133187:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3136190-3136308:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3138229-3138381:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3140003-3140134:1:exon

ERCC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ERCC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription and DNA repair factor IIH helicase subunit XPB
translation: MGKRDRDKKKAKKRHYEDEEEDEDDVPGNDSQEAVPSAAGKQVDESGTKVDEYGAKDYRLQMPLKDDHASRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTAYSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESSHPDVIQHLLQDPVIRECRLRNSEGEATELITETFMSKSAIAKTAEGSGGPSTSRVTDPQGKSDIPTDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEDEELAFSTREEQQQLLQKVLAATDLDAEEEVVAGEFGSKSSQVSRRFGTMSSMSGADDTVYMEYHSARSKASTKHVHPLFKRFRK
SIO_010081: ERCC3
subclass of: SO_0000673
so part of: ERCC3
location: join(3113803..3113821,3114115..3114320,3115179..3115415,3117835..3117884,3118257..3118392,3118588..3118752,3119253..3119457,3121014..3121328,3126700..3126884,3130501..3130703,3131469..3131565,3133070..3133187,3136190..3136308,3138229..3138381,3140003..3140134)
location: region:3113803-3140134:1
so has part: feature:3113803-3113821:1:exon
so has part: feature:3114115-3114320:1:exon
so has part: feature:3115179-3115415:1:exon
so has part: feature:3117835-3117884:1:exon
so has part: feature:3118257-3118392:1:exon
so has part: feature:3118588-3118752:1:exon
so has part: feature:3119253-3119457:1:exon
so has part: feature:3121014-3121328:1:exon
so has part: feature:3126700-3126884:1:exon
so has part: feature:3130501-3130703:1:exon
so has part: feature:3131469-3131565:1:exon
so has part: feature:3133070-3133187:1:exon
so has part: feature:3136190-3136308:1:exon
so has part: feature:3138229-3138381:1:exon
so has part: feature:3140003-3140134:1:exon

XP_041595623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3113803-3113821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3114115-3114320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3115179-3115415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3117835-3117884:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3118257-3118392:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3118588-3118752:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3119253-3119457:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3121014-3121328:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3126700-3126884:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3130501-3130703:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3131469-3131565:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3133070-3133187:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3136190-3136308:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3138229-3138381:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3140003-3140134:1:exon

LOC121482057
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482057
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3170473..3194415
location: region:3170473-3194415:1
so has part: feature:3170473-3194415:1:exon
subclass of: SO_0000010

121482057
type: Gene
SIO_000068: ncbigene

position:3170473:1
position: 3170473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3194415:1
position: 3194415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3170473-3194415:1:exon

LOC121482057
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LOC121482057
product: cytochrome P450 27C1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041739855.1
SIO_010081: LOC121482057
subclass of: SO_0000673
so part of: LOC121482057
location: join(3170473..3170532,3176310..3176427,3177471..3177670,3179375..3179584,3180795..3180958,3187194..3187360,3188727..3188805,3189281..3189484,3194077..3194415)
location: region:3170473-3194415:1
so has part: feature:3170473-3170532:1:exon
so has part: feature:3176310-3176427:1:exon
so has part: feature:3177471-3177670:1:exon
so has part: feature:3179375-3179584:1:exon
so has part: feature:3180795-3180958:1:exon
so has part: feature:3187194-3187360:1:exon
so has part: feature:3188727-3188805:1:exon
so has part: feature:3189281-3189484:1:exon
so has part: feature:3194077-3194415:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3170473-3170532:1:exon

position:3170532:1
position: 3170532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3176310-3176427:1:exon

position:3176310:1
position: 3176310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3176427:1
position: 3176427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3177471-3177670:1:exon

position:3177471:1
position: 3177471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3177670:1
position: 3177670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3179375-3179584:1:exon

position:3179375:1
position: 3179375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3179584:1
position: 3179584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3180795-3180958:1:exon

position:3180795:1
position: 3180795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3180958:1
position: 3180958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3187194-3187360:1:exon

position:3187194:1
position: 3187194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3187360:1
position: 3187360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3188727-3188805:1:exon

position:3188727:1
position: 3188727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3188805:1
position: 3188805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3189281-3189484:1:exon

position:3189281:1
position: 3189281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3189484:1
position: 3189484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3194077-3194415:1:exon

position:3194077:1
position: 3194077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121482057
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LOC121482057
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome P450 27C1
translation: MVAQVLRAEGATPQRANMESWQEYRHLRGRSTGLISAEGEQWLKMRRVLRQRILKPRDVAIFSGEINQVIADLIKRIYILKSQAEDGETVTNVNDLFFKYSMEGVATILYESRLGCLENSVPQPTVDYIEALGLMFSMFKTSMYAGAIPRWLRPLIPKPWLEFCRSWDGLFKFSQIHVDNKLKDIQCHMDRGERVRGGLLTCLFLSQELTLEEIYANMTEMLLAGVDTTSFTLSWAVYLLARHPQVQQTLYQEIVKNLGERHIPTAADVPKVPLVRALLKETLRLFPVLPGNGRVTQEDLVVGGYLIPKGTQLALCHYATSYEDENFPRAKEFWPERWLRKGSLDRVDNFGSIPFGYGVRSCIGRRIAELEIHLVIIQLLQHFEIKPSSWTKAVPAKTHGLLTPGGPIHVRFVNRK
SIO_010081: LOC121482057
subclass of: SO_0000673
so part of: LOC121482057
location: join(3176318..3176427,3177471..3177670,3179375..3179584,3180795..3180958,3187194..3187360,3188727..3188805,3189281..3189484,3194077..3194193)
location: region:3176318-3194193:1
so has part: feature:3176318-3176427:1:exon
so has part: feature:3177471-3177670:1:exon
so has part: feature:3179375-3179584:1:exon
so has part: feature:3180795-3180958:1:exon
so has part: feature:3187194-3187360:1:exon
so has part: feature:3188727-3188805:1:exon
so has part: feature:3189281-3189484:1:exon
so has part: feature:3194077-3194193:1:exon

XP_041595789.1
type: Protein
SIO_000068: ncbiprotein

position:3176318:1
position: 3176318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3194193:1
position: 3194193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3176318-3176427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3177471-3177670:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3179375-3179584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3180795-3180958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3187194-3187360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3188727-3188805:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3189281-3189484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3194077-3194193:1:exon

LOC121482026
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482026
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3274614..3276054)
location: region:3274614-3276054:-1
so has part: feature:3274614-3276054:-1:exon
subclass of: SO_0000011

121482026
type: Gene
SIO_000068: ncbigene

position:3274614:-1
position: 3274614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3276054:-1
position: 3276054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3274614-3276054:-1:exon

LOC121482026
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: lncRNA
gene: LOC121482026
product: uncharacterized LOC121482026
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005985488.1
SIO_010081: LOC121482026
subclass of: SO_0000673
so part of: LOC121482026
location: complement(join(3274614..3275149,3275753..3276054))
location: region:3274614-3276054:-1
so has part: feature:3275753-3276054:-1:exon
so has part: feature:3274614-3275149:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3275753-3276054:-1:exon

position:3275753:-1
position: 3275753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3274614-3275149:-1:exon

position:3275149:-1
position: 3275149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BIN1
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: BIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3277098..3329022
location: region:3277098-3329022:1
so has part: feature:3277098-3329022:1:exon
subclass of: SO_0000010

121481942
type: Gene
SIO_000068: ncbigene

position:3277098:1
position: 3277098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3329022:1
position: 3329022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3277098-3329022:1:exon

BIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: BIN1
product: bridging integrator 1, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041739610.1
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277098..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3310679..3310771,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3320214..3320342,3323456..3323563,3324044..3324067,3325016..3325123,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3329022)
location: region:3277098-3329022:1
so has part: feature:3277098-3277349:1:exon
so has part: feature:3304398-3304478:1:exon
so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3310679-3310771:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3320214-3320342:1:exon
so has part: feature:3323456-3323563:1:exon
so has part: feature:3324044-3324067:1:exon
so has part: feature:3325016-3325123:1:exon
so has part: feature:3325997-3326086:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3329022:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3277098-3277349:1:exon

position:3277349:1
position: 3277349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

position:3304398:1
position: 3304398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3304478:1
position: 3304478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

position:3308051:1
position: 3308051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3308105:1
position: 3308105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

position:3308336:1
position: 3308336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3308430:1
position: 3308430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

position:3308796:1
position: 3308796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3308891:1
position: 3308891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

position:3309800:1
position: 3309800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3309907:1
position: 3309907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3310679-3310771:1:exon

position:3310679:1
position: 3310679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3310771:1
position: 3310771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3314474-3314559:1:exon

position:3314474:1
position: 3314474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3314559:1
position: 3314559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3314752-3314827:1:exon

position:3314752:1
position: 3314752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3314827:1
position: 3314827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3315892-3315974:1:exon

position:3315892:1
position: 3315892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3315974:1
position: 3315974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3318842-3318983:1:exon

position:3318842:1
position: 3318842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3318983:1
position: 3318983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3320214-3320342:1:exon

position:3320214:1
position: 3320214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3320342:1
position: 3320342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3323456-3323563:1:exon

position:3323456:1
position: 3323456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3323563:1
position: 3323563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3324044-3324067:1:exon

position:3324044:1
position: 3324044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3324067:1
position: 3324067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3325016-3325123:1:exon

position:3325016:1
position: 3325016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3325123:1
position: 3325123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3325997-3326086:1:exon

position:3325997:1
position: 3325997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3326086:1
position: 3326086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3326331-3326441:1:exon

position:3326331:1
position: 3326331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3326441:1
position: 3326441
reference: sequence
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urn:…
SIO_000300: 18
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position:3326741:1
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reference: sequence
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position:3326842:1
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reference: sequence
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urn:…
SIO_000300: 19
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position:3328397:1
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reference: sequence
type: ForwardStrandPosition
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BIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: BIN1
product: bridging integrator 1, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041739611.1
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277101..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3310679..3310771,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3320214..3320342,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3329022)
location: region:3277101-3329022:1
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urn:…
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BIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: BIN1
product: bridging integrator 1, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041739612.1
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277101..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3310679..3310771,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3325016..3325123,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3329022)
location: region:3277101-3329022:1
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urn:…
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BIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: BIN1
product: bridging integrator 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739597.1
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277101..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3320214..3320342,3323456..3323563,3324044..3324067,3325016..3325123,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3329022)
location: region:3277101-3329022:1
so has part: feature:3277101-3277349:1:exon
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urn:…
SIO_000300: 1
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urn:…
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SIO_000628: feature:3328397-3329022:1:exon

BIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: BIN1
product: bridging integrator 1, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041739613.1
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277103..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3310679..3310771,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3329022)
location: region:3277103-3329022:1
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so has part: feature:3328397-3329022:1:exon

position:3277103:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
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SIO_000628: feature:3277103-3277349:1:exon

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SIO_000628: feature:3304398-3304478:1:exon

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BIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: BIN1
product: bridging integrator 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739600.1
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277103..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3320214..3320342,3325016..3325123,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3329022)
location: region:3277103-3329022:1
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BIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: BIN1
product: bridging integrator 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041739596.1
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
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reference: sequence
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urn:…
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urn:…
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BIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: BIN1
product: bridging integrator 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739603.1
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277105..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3320214..3320342,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3329022)
location: region:3277105-3329022:1
so has part: feature:3277105-3277349:1:exon
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position:3277105:1
position: 3277105
reference: sequence
type: ForwardStrandPosition
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urn:…
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BIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: BIN1
product: bridging integrator 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739604.1
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
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location: region:3277105-3329022:1
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BIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: BIN1
product: bridging integrator 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041739599.1
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
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location: region:3277106-3329022:1
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position:3277106:1
position: 3277106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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BIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: BIN1
product: bridging integrator 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739606.1
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277106..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3329022)
location: region:3277106-3329022:1
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BIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: BIN1
product: bridging integrator 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041739601.1
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
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location: region:3277107-3329022:1
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position:3277107:1
position: 3277107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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BIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: BIN1
product: bridging integrator 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041739602.1
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
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BIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: BIN1
product: bridging integrator 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041739605.1
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277108..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3317272..3317316,3318842..3318983,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3329022)
location: region:3277108-3329022:1
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position:3277108:1
position: 3277108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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BIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: BIN1
product: bridging integrator 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739608.1
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277108..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3326331..3326441,3326741..3326842,3328397..3329022)
location: region:3277108-3329022:1
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so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3329022:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3277108-3277349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3314474-3314559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3314752-3314827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3315892-3315974:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3318842-3318983:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3326331-3326441:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3326741-3326842:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3328397-3329022:1:exon

BIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: BIN1
product: bridging integrator 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041739607.1
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277110..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3317272..3317316,3318842..3318983,3326331..3326441,3326741..3326842,3328397..3329022)
location: region:3277110-3329022:1
so has part: feature:3277110-3277349:1:exon
so has part: feature:3304398-3304478:1:exon
so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3317272-3317316:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3329022:1:exon

position:3277110:1
position: 3277110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3277110-3277349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3314474-3314559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3314752-3314827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3315892-3315974:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3317272-3317316:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3318842-3318983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3326331-3326441:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3326741-3326842:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3328397-3329022:1:exon

BIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: BIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myc box-dependent-interacting protein 1 isoform X13
translation: MAEMGSKGVTAGKIASNVQKKLTRAQEKVLQKLGKADETKDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDEANKIAENNDLLWLDYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKPVSLLEKAAPQWCQGKLQAHLVAQTNLLRNQAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVSLEKQHGSNTFTVKAQPSDNAPAKGNKSPSPPPDGSPAATPEIRVNHEPEPSAAAGAALPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFDDTFVPEISVTTPSQFEAPGPFSEQASLLDLDFDPLPPVASPVKAPTPSGQSIPWDLWEPTESPAGSLPSGEPSATEGTFAVAWPSQTAEPGPAQPAEASEVAGGTPPAAGAQEPGETAASEAASSSLPAVVVETFSATVNGTVEGGGGAGRLDLPPGFMFKVQAQHDYVATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277266..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3310679..3310771,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3320214..3320342,3323456..3323563,3324044..3324067,3325016..3325123,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3328504)
location: region:3277266-3328504:1
so has part: feature:3277266-3277349:1:exon
so has part: feature:3304398-3304478:1:exon
so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3310679-3310771:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3320214-3320342:1:exon
so has part: feature:3323456-3323563:1:exon
so has part: feature:3324044-3324067:1:exon
so has part: feature:3325016-3325123:1:exon
so has part: feature:3325997-3326086:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3328504:1:exon

XP_041595544.1
type: Protein
SIO_000068: ncbiprotein

position:3277266:1
position: 3277266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3328504:1
position: 3328504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3277266-3277349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3310679-3310771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3314474-3314559:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3314752-3314827:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3315892-3315974:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3318842-3318983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3320214-3320342:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3323456-3323563:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3324044-3324067:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3325016-3325123:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3325997-3326086:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3326331-3326441:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3326741-3326842:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3328397-3328504:1:exon

BIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: BIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myc box-dependent-interacting protein 1 isoform X14
translation: MAEMGSKGVTAGKIASNVQKKLTRAQEKVLQKLGKADETKDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDEANKIAENNDLLWLDYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKPVSLLEKAAPQWCQGKLQAHLVAQTNLLRNQAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVSLEKQHGSNTFTVKAQPSDNAPAKGNKSPSPPPDGSPAATPEIRVNHEPEPSAAAGAALPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFDDTFVPEISVTTPSQPAEASEVAGGTPPAAGAQEPGETAASEAASSSLPAVVVETFSATVNGTVEGGGGAGRLDLPPGFMFKVQAQHDYVATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277266..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3310679..3310771,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3320214..3320342,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3328504)
location: region:3277266-3328504:1
so has part: feature:3277266-3277349:1:exon
so has part: feature:3304398-3304478:1:exon
so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3310679-3310771:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3320214-3320342:1:exon
so has part: feature:3325997-3326086:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3328504:1:exon

XP_041595545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3277266-3277349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3310679-3310771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3314474-3314559:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3314752-3314827:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3315892-3315974:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3318842-3318983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3320214-3320342:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3325997-3326086:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3326331-3326441:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3326741-3326842:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3328397-3328504:1:exon

BIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: BIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myc box-dependent-interacting protein 1 isoform X15
translation: MAEMGSKGVTAGKIASNVQKKLTRAQEKVLQKLGKADETKDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDEANKIAENNDLLWLDYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKPVSLLEKAAPQWCQGKLQAHLVAQTNLLRNQAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVSLEKQHGSNTFTVKAQPSDNAPAKGNKSPSPPPDGSPAATPEIRVNHEPEPSAAAGAALPKSPSQPTESPAGSLPSGEPSATEGTFAVAWPSQTAEPGPAQPAEASEVAGGTPPAAGAQEPGETAASEAASSSLPAVVVETFSATVNGTVEGGGGAGRLDLPPGFMFKVQAQHDYVATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277266..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3310679..3310771,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3325016..3325123,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3328504)
location: region:3277266-3328504:1
so has part: feature:3277266-3277349:1:exon
so has part: feature:3304398-3304478:1:exon
so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3310679-3310771:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3325016-3325123:1:exon
so has part: feature:3325997-3326086:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3328504:1:exon

XP_041595546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3277266-3277349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3310679-3310771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3314474-3314559:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3314752-3314827:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3315892-3315974:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3318842-3318983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3325016-3325123:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3325997-3326086:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3326331-3326441:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3326741-3326842:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3328397-3328504:1:exon

BIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: BIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myc box-dependent-interacting protein 1 isoform X16
translation: MAEMGSKGVTAGKIASNVQKKLTRAQEKVLQKLGKADETKDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDEANKIAENNDLLWLDYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKPVSLLEKAAPQWCQGKLQAHLVAQTNLLRNQAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVSLEKQHGSNTFTVKAQPSDNAPAKGNKSPSPPPDGSPAATPEIRVNHEPEPSAAAGAALPKSPSQPAEASEVAGGTPPAAGAQEPGETAASEAASSSLPAVVVETFSATVNGTVEGGGGAGRLDLPPGFMFKVQAQHDYVATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277266..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3310679..3310771,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3328504)
location: region:3277266-3328504:1
so has part: feature:3277266-3277349:1:exon
so has part: feature:3304398-3304478:1:exon
so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3310679-3310771:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3325997-3326086:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3328504:1:exon

XP_041595547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3277266-3277349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3310679-3310771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3314474-3314559:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3314752-3314827:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3315892-3315974:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3318842-3318983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3325997-3326086:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3326331-3326441:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3326741-3326842:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3328397-3328504:1:exon

BIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: BIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myc box-dependent-interacting protein 1 isoform X1
translation: MAEMGSKGVTAGKIASNVQKKLTRAQEKVLQKLGKADETKDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDEANKIAENNDLLWLDYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVSLEKQHGSNTFTVKAQPRKKTKLLSRLLRKKNSDNAPAKGNKSPSPPPDGSPAATPEIRVNHEPEPSAAAGAALPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFDDTFVPEISVTTPSQFEAPGPFSEQASLLDLDFDPLPPVASPVKAPTPSGQSIPWDLWEPTESPAGSLPSGEPSATEGTFAVAWPSQTAEPGPAQPAEASEVAGGTPPAAGAQEPGETAASEAASSSLPAVVVETFSATVNGTVEGGGGAGRLDLPPGFMFKVQAQHDYVATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277266..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3317272..3317316,3318842..3318983,3320214..3320342,3323456..3323563,3324044..3324067,3325016..3325123,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3328504)
location: region:3277266-3328504:1
so has part: feature:3277266-3277349:1:exon
so has part: feature:3304398-3304478:1:exon
so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3317272-3317316:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3320214-3320342:1:exon
so has part: feature:3323456-3323563:1:exon
so has part: feature:3324044-3324067:1:exon
so has part: feature:3325016-3325123:1:exon
so has part: feature:3325997-3326086:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3328504:1:exon

XP_041595530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3277266-3277349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3314474-3314559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3314752-3314827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3315892-3315974:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3317272-3317316:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3318842-3318983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3320214-3320342:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3323456-3323563:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3324044-3324067:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3325016-3325123:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3325997-3326086:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3326331-3326441:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3326741-3326842:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3328397-3328504:1:exon

BIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: BIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myc box-dependent-interacting protein 1 isoform X3
translation: MAEMGSKGVTAGKIASNVQKKLTRAQEKVLQKLGKADETKDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDEANKIAENNDLLWLDYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVSLEKQHGSNTFTVKAQPRKKTKLLSRLLRKKNSDNAPAKGNKSPSPPPDGSPAATPEIRVNHEPEPSAAAGAALPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFDDTFVPEISVTTPSQPTESPAGSLPSGEPSATEGTFAVAWPSQTAEPGPAQPAEASEVAGGTPPAAGAQEPGETAASEAASSSLPAVVVETFSATVNGTVEGGGGAGRLDLPPGFMFKVQAQHDYVATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277266..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3317272..3317316,3318842..3318983,3320214..3320342,3325016..3325123,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3328504)
location: region:3277266-3328504:1
so has part: feature:3277266-3277349:1:exon
so has part: feature:3304398-3304478:1:exon
so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3317272-3317316:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3320214-3320342:1:exon
so has part: feature:3325016-3325123:1:exon
so has part: feature:3325997-3326086:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3328504:1:exon

XP_041595533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3277266-3277349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3314474-3314559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3314752-3314827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3315892-3315974:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3317272-3317316:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3318842-3318983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3320214-3320342:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3325016-3325123:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3325997-3326086:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3326331-3326441:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3326741-3326842:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3328397-3328504:1:exon

BIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: BIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myc box-dependent-interacting protein 1 isoform X5
translation: MAEMGSKGVTAGKIASNVQKKLTRAQEKVLQKLGKADETKDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDEANKIAENNDLLWLDYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVSLEKQHGSNTFTVKAQPRKKTKLLSRLLRKKNSDNAPAKGNKSPSPPPDGSPAATPEIRVNHEPEPSAAAGAALPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFDDTFVPEISVTTPSQPAEASEVAGGTPPAAGAQEPGETAASEAASSSLPAVVVETFSATVNGTVEGGGGAGRLDLPPGFMFKVQAQHDYVATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277266..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3317272..3317316,3318842..3318983,3320214..3320342,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3328504)
location: region:3277266-3328504:1
so has part: feature:3277266-3277349:1:exon
so has part: feature:3304398-3304478:1:exon
so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3317272-3317316:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3320214-3320342:1:exon
so has part: feature:3325997-3326086:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3328504:1:exon

XP_041595535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3277266-3277349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3314474-3314559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3314752-3314827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3315892-3315974:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3317272-3317316:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3318842-3318983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3320214-3320342:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3325997-3326086:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3326331-3326441:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3326741-3326842:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3328397-3328504:1:exon

BIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: BIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myc box-dependent-interacting protein 1 isoform X6
translation: MAEMGSKGVTAGKIASNVQKKLTRAQEKVLQKLGKADETKDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDEANKIAENNDLLWLDYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVSLEKQHGSNTFTVKAQPRKKTKLLSRLLRKKNSDNAPAKGNKSPSPPPDGSPAATPEIRVNHEPEPSAAAGAALPKSPSQPTESPAGSLPSGEPSATEGTFAVAWPSQTAEPGPAQPAEASEVAGGTPPAAGAQEPGETAASEAASSSLPAVVVETFSATVNGTVEGGGGAGRLDLPPGFMFKVQAQHDYVATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277266..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3317272..3317316,3318842..3318983,3325016..3325123,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3328504)
location: region:3277266-3328504:1
so has part: feature:3277266-3277349:1:exon
so has part: feature:3304398-3304478:1:exon
so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3317272-3317316:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3325016-3325123:1:exon
so has part: feature:3325997-3326086:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3328504:1:exon

XP_041595536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3277266-3277349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3314474-3314559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3314752-3314827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3315892-3315974:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3317272-3317316:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3318842-3318983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3325016-3325123:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3325997-3326086:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3326331-3326441:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3326741-3326842:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3328397-3328504:1:exon

BIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: BIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myc box-dependent-interacting protein 1 isoform X9
translation: MAEMGSKGVTAGKIASNVQKKLTRAQEKVLQKLGKADETKDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDEANKIAENNDLLWLDYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVSLEKQHGSNTFTVKAQPRKKTKLLSRLLRKKNSDNAPAKGNKSPSPPPDGSPAATPEIRVNHEPEPSAAAGAALPKSPSQPAEASEVAGGTPPAAGAQEPGETAASEAASSSLPAVVVETFSATVNGTVEGGGGAGRLDLPPGFMFKVQAQHDYVATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277266..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3317272..3317316,3318842..3318983,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3328504)
location: region:3277266-3328504:1
so has part: feature:3277266-3277349:1:exon
so has part: feature:3304398-3304478:1:exon
so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3317272-3317316:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3325997-3326086:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3328504:1:exon

XP_041595539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3277266-3277349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3314474-3314559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3314752-3314827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3315892-3315974:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3317272-3317316:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3318842-3318983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3325997-3326086:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3326331-3326441:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3326741-3326842:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3328397-3328504:1:exon

BIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: BIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myc box-dependent-interacting protein 1 isoform X11
translation: MAEMGSKGVTAGKIASNVQKKLTRAQEKVLQKLGKADETKDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDEANKIAENNDLLWLDYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVSLEKQHGSNTFTVKAQPRKKTKLLSRLLRKKNSDNAPAKGNKSPSPPPDGSPAATPEIRVNHEPEPSAAAGAALPKSPSQSSLPAVVVETFSATVNGTVEGGGGAGRLDLPPGFMFKVQAQHDYVATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277266..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3317272..3317316,3318842..3318983,3326331..3326441,3326741..3326842,3328397..3328504)
location: region:3277266-3328504:1
so has part: feature:3277266-3277349:1:exon
so has part: feature:3304398-3304478:1:exon
so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3317272-3317316:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3328504:1:exon

XP_041595541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3277266-3277349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3314474-3314559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3314752-3314827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3315892-3315974:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3317272-3317316:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3318842-3318983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3326331-3326441:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3326741-3326842:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3328397-3328504:1:exon

BIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: BIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myc box-dependent-interacting protein 1 isoform X2
translation: MAEMGSKGVTAGKIASNVQKKLTRAQEKVLQKLGKADETKDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDEANKIAENNDLLWLDYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVSLEKQHGSNTFTVKAQPSDNAPAKGNKSPSPPPDGSPAATPEIRVNHEPEPSAAAGAALPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFDDTFVPEISVTTPSQFEAPGPFSEQASLLDLDFDPLPPVASPVKAPTPSGQSIPWDLWEPTESPAGSLPSGEPSATEGTFAVAWPSQTAEPGPAQPAEASEVAGGTPPAAGAQEPGETAASEAASSSLPAVVVETFSATVNGTVEGGGGAGRLDLPPGFMFKVQAQHDYVATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277266..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3320214..3320342,3323456..3323563,3324044..3324067,3325016..3325123,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3328504)
location: region:3277266-3328504:1
so has part: feature:3277266-3277349:1:exon
so has part: feature:3304398-3304478:1:exon
so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3320214-3320342:1:exon
so has part: feature:3323456-3323563:1:exon
so has part: feature:3324044-3324067:1:exon
so has part: feature:3325016-3325123:1:exon
so has part: feature:3325997-3326086:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3328504:1:exon

XP_041595531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3277266-3277349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3314474-3314559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3314752-3314827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3315892-3315974:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3318842-3318983:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3320214-3320342:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3323456-3323563:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3324044-3324067:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3325016-3325123:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3325997-3326086:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3326331-3326441:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3326741-3326842:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3328397-3328504:1:exon

BIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: BIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myc box-dependent-interacting protein 1 isoform X4
translation: MAEMGSKGVTAGKIASNVQKKLTRAQEKVLQKLGKADETKDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDEANKIAENNDLLWLDYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVSLEKQHGSNTFTVKAQPSDNAPAKGNKSPSPPPDGSPAATPEIRVNHEPEPSAAAGAALPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFDDTFVPEISVTTPSQPTESPAGSLPSGEPSATEGTFAVAWPSQTAEPGPAQPAEASEVAGGTPPAAGAQEPGETAASEAASSSLPAVVVETFSATVNGTVEGGGGAGRLDLPPGFMFKVQAQHDYVATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277266..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3320214..3320342,3325016..3325123,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3328504)
location: region:3277266-3328504:1
so has part: feature:3277266-3277349:1:exon
so has part: feature:3304398-3304478:1:exon
so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3320214-3320342:1:exon
so has part: feature:3325016-3325123:1:exon
so has part: feature:3325997-3326086:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3328504:1:exon

XP_041595534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3277266-3277349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3314474-3314559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3314752-3314827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3315892-3315974:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3318842-3318983:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3320214-3320342:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3325016-3325123:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3325997-3326086:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3326331-3326441:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3326741-3326842:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3328397-3328504:1:exon

BIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: BIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myc box-dependent-interacting protein 1 isoform X7
translation: MAEMGSKGVTAGKIASNVQKKLTRAQEKVLQKLGKADETKDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDEANKIAENNDLLWLDYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVSLEKQHGSNTFTVKAQPSDNAPAKGNKSPSPPPDGSPAATPEIRVNHEPEPSAAAGAALPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFDDTFVPEISVTTPSQPAEASEVAGGTPPAAGAQEPGETAASEAASSSLPAVVVETFSATVNGTVEGGGGAGRLDLPPGFMFKVQAQHDYVATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277266..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3320214..3320342,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3328504)
location: region:3277266-3328504:1
so has part: feature:3277266-3277349:1:exon
so has part: feature:3304398-3304478:1:exon
so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3320214-3320342:1:exon
so has part: feature:3325997-3326086:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3328504:1:exon

XP_041595537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3277266-3277349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3314474-3314559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3314752-3314827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3315892-3315974:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3318842-3318983:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3320214-3320342:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3325997-3326086:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3326331-3326441:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3326741-3326842:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3328397-3328504:1:exon

BIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: BIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myc box-dependent-interacting protein 1 isoform X8
translation: MAEMGSKGVTAGKIASNVQKKLTRAQEKVLQKLGKADETKDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDEANKIAENNDLLWLDYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVSLEKQHGSNTFTVKAQPSDNAPAKGNKSPSPPPDGSPAATPEIRVNHEPEPSAAAGAALPKSPSQPTESPAGSLPSGEPSATEGTFAVAWPSQTAEPGPAQPAEASEVAGGTPPAAGAQEPGETAASEAASSSLPAVVVETFSATVNGTVEGGGGAGRLDLPPGFMFKVQAQHDYVATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277266..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3325016..3325123,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3328504)
location: region:3277266-3328504:1
so has part: feature:3277266-3277349:1:exon
so has part: feature:3304398-3304478:1:exon
so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3325016-3325123:1:exon
so has part: feature:3325997-3326086:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3328504:1:exon

XP_041595538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3277266-3277349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3314474-3314559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3314752-3314827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3315892-3315974:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3318842-3318983:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3325016-3325123:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3325997-3326086:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3326331-3326441:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3326741-3326842:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3328397-3328504:1:exon

BIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: BIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myc box-dependent-interacting protein 1 isoform X10
translation: MAEMGSKGVTAGKIASNVQKKLTRAQEKVLQKLGKADETKDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDEANKIAENNDLLWLDYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVSLEKQHGSNTFTVKAQPSDNAPAKGNKSPSPPPDGSPAATPEIRVNHEPEPSAAAGAALPKSPSQPAEASEVAGGTPPAAGAQEPGETAASEAASSSLPAVVVETFSATVNGTVEGGGGAGRLDLPPGFMFKVQAQHDYVATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277266..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3325997..3326086,3326331..3326441,3326741..3326842,3328397..3328504)
location: region:3277266-3328504:1
so has part: feature:3277266-3277349:1:exon
so has part: feature:3304398-3304478:1:exon
so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3325997-3326086:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3328504:1:exon

XP_041595540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3277266-3277349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3314474-3314559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3314752-3314827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3315892-3315974:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3318842-3318983:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3325997-3326086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3326331-3326441:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3326741-3326842:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3328397-3328504:1:exon

BIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: BIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myc box-dependent-interacting protein 1 isoform X12
translation: MAEMGSKGVTAGKIASNVQKKLTRAQEKVLQKLGKADETKDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDEANKIAENNDLLWLDYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVSLEKQHGSNTFTVKAQPSDNAPAKGNKSPSPPPDGSPAATPEIRVNHEPEPSAAAGAALPKSPSQSSLPAVVVETFSATVNGTVEGGGGAGRLDLPPGFMFKVQAQHDYVATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
SIO_010081: BIN1
subclass of: SO_0000673
so part of: BIN1
location: join(3277266..3277349,3304398..3304478,3308051..3308105,3308336..3308430,3308796..3308891,3309800..3309907,3314474..3314559,3314752..3314827,3315892..3315974,3318842..3318983,3326331..3326441,3326741..3326842,3328397..3328504)
location: region:3277266-3328504:1
so has part: feature:3277266-3277349:1:exon
so has part: feature:3304398-3304478:1:exon
so has part: feature:3308051-3308105:1:exon
so has part: feature:3308336-3308430:1:exon
so has part: feature:3308796-3308891:1:exon
so has part: feature:3309800-3309907:1:exon
so has part: feature:3314474-3314559:1:exon
so has part: feature:3314752-3314827:1:exon
so has part: feature:3315892-3315974:1:exon
so has part: feature:3318842-3318983:1:exon
so has part: feature:3326331-3326441:1:exon
so has part: feature:3326741-3326842:1:exon
so has part: feature:3328397-3328504:1:exon

XP_041595542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3277266-3277349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3304398-3304478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3308051-3308105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3308336-3308430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3308796-3308891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309800-3309907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3314474-3314559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3314752-3314827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3315892-3315974:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3318842-3318983:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3326331-3326441:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3326741-3326842:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3328397-3328504:1:exon

LOC121481943
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121481943
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3295857..3310669)
location: region:3295857-3310669:-1
so has part: feature:3295857-3310669:-1:exon
subclass of: SO_0000011

121481943
type: Gene
SIO_000068: ncbigene

position:3295857:-1
position: 3295857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3310669:-1
position: 3310669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3295857-3310669:-1:exon

LOC121481943
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: lncRNA
gene: LOC121481943
product: uncharacterized LOC121481943
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005985456.1
SIO_010081: LOC121481943
subclass of: SO_0000673
so part of: LOC121481943
location: complement(join(3295857..3296531,3299664..3299881,3310516..3310669))
location: region:3295857-3310669:-1
so has part: feature:3310516-3310669:-1:exon
so has part: feature:3299664-3299881:-1:exon
so has part: feature:3295857-3296531:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3310516-3310669:-1:exon

position:3310516:-1
position: 3310516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3299664-3299881:-1:exon

position:3299664:-1
position: 3299664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3299881:-1
position: 3299881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3295857-3296531:-1:exon

position:3296531:-1
position: 3296531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GYPC
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: GYPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3738393..3780954)
location: region:3738393-3780954:-1
so has part: feature:3738393-3780954:-1:exon
subclass of: SO_0000010

121481953
type: Gene
SIO_000068: ncbigene

position:3738393:-1
position: 3738393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3780954:-1
position: 3780954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3738393-3780954:-1:exon

GYPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: GYPC
product: glycophorin C (Gerbich blood group), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739653.1
SIO_010081: GYPC
subclass of: SO_0000673
so part of: GYPC
location: complement(join(3738393..3739097,3740049..3740105,3758147..3758218,3779967..3780598))
location: region:3738393-3780598:-1
so has part: feature:3779967-3780598:-1:exon
so has part: feature:3758147-3758218:-1:exon
so has part: feature:3740049-3740105:-1:exon
so has part: feature:3738393-3739097:-1:exon

position:3780598:-1
position: 3780598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3779967-3780598:-1:exon

position:3779967:-1
position: 3779967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3758147-3758218:-1:exon

position:3758147:-1
position: 3758147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3758218:-1
position: 3758218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3740049-3740105:-1:exon

position:3740049:-1
position: 3740049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3740105:-1
position: 3740105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3738393-3739097:-1:exon

position:3739097:-1
position: 3739097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GYPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: GYPC
product: glycophorin C (Gerbich blood group), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739654.1
SIO_010081: GYPC
subclass of: SO_0000673
so part of: GYPC
location: complement(join(3738393..3739097,3740049..3740105,3779967..3780589))
location: region:3738393-3780589:-1
so has part: feature:3779967-3780589:-1:exon
so has part: feature:3740049-3740105:-1:exon
so has part: feature:3738393-3739097:-1:exon

position:3780589:-1
position: 3780589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3779967-3780589:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3740049-3740105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3738393-3739097:-1:exon

GYPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: GYPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycophorin-C isoform X3
translation: MSGLNGTSPPRFELDTGTFFMSLGANIAIIAGVIAAIALVLICLLIFMLRYMYQHKGTYYTNEAKGTEFAESADTALQDDPSLQDTGDNSKKEYFI
SIO_010081: GYPC
subclass of: SO_0000673
so part of: GYPC
location: complement(join(3738901..3739097,3740049..3740105,3779967..3780003))
location: region:3738901-3780003:-1
so has part: feature:3779967-3780003:-1:exon
so has part: feature:3740049-3740105:-1:exon
so has part: feature:3738901-3739097:-1:exon

XP_041595588.1
type: Protein
SIO_000068: ncbiprotein

position:3738901:-1
position: 3738901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3780003:-1
position: 3780003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3779967-3780003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3740049-3740105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3738901-3739097:-1:exon

GYPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: GYPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycophorin-C isoform X2
translation: MSGLNGTSPPRFGALDPGAIYVCTHVCRSYAQINGNELDTGTFFMSLGANIAIIAGVIAAIALVLICLLIFMLRYMYQHKGTYYTNEAKGTEFAESADTALQDDPSLQDTGDNSKKEYFI
SIO_010081: GYPC
subclass of: SO_0000673
so part of: GYPC
location: complement(join(3738901..3739097,3740049..3740105,3758147..3758218,3779967..3780003))
location: region:3738901-3780003:-1
so has part: feature:3779967-3780003:-1:exon
so has part: feature:3758147-3758218:-1:exon
so has part: feature:3740049-3740105:-1:exon
so has part: feature:3738901-3739097:-1:exon

XP_041595587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3779967-3780003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3758147-3758218:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3740049-3740105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738901-3739097:-1:exon

GYPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: GYPC
product: glycophorin C (Gerbich blood group), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739652.1
SIO_010081: GYPC
subclass of: SO_0000673
so part of: GYPC
location: complement(join(3742432..3742513,3748288..3748459,3779967..3780954))
location: region:3742432-3780954:-1
so has part: feature:3779967-3780954:-1:exon
so has part: feature:3748288-3748459:-1:exon
so has part: feature:3742432-3742513:-1:exon

position:3742432:-1
position: 3742432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3779967-3780954:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3748288-3748459:-1:exon

position:3748288:-1
position: 3748288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3748459:-1
position: 3748459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3742432-3742513:-1:exon

position:3742513:-1
position: 3742513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GYPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: GYPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycophorin-C isoform X1
translation: MQPAHLGPGPLPSGRARAARTGAPPPAPGCGAEAEAGPSLPPSCAALAPSSPLRSAARALRDERPQWHVAAALRKRVSVRTLDSSHIWSSSIHICSPGKRQDELGALNALAVFPCEDFFIGRENVYWVRQKKLKSVNIKYFADTPP
SIO_010081: GYPC
subclass of: SO_0000673
so part of: GYPC
location: complement(join(3742466..3742513,3748288..3748459,3779967..3780187))
location: region:3742466-3780187:-1
so has part: feature:3779967-3780187:-1:exon
so has part: feature:3748288-3748459:-1:exon
so has part: feature:3742466-3742513:-1:exon

XP_041595586.1
type: Protein
SIO_000068: ncbiprotein

position:3742466:-1
position: 3742466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3780187:-1
position: 3780187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3779967-3780187:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3748288-3748459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3742466-3742513:-1:exon

LOC121482109
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4257786..4265337)
location: region:4257786-4265337:-1
so has part: feature:4257786-4265337:-1:exon
subclass of: SO_0000010

121482109
type: Gene
SIO_000068: ncbigene

position:4257786:-1
position: 4257786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4265337:-1
position: 4265337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4257786-4265337:-1:exon

LOC121482109
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LOC121482109
product: glutathione S-transferase kappa 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041739949.1
SIO_010081: LOC121482109
subclass of: SO_0000673
so part of: LOC121482109
location: complement(join(4257786..4258451,4265269..4265337))
location: region:4257786-4265337:-1
so has part: feature:4265269-4265337:-1:exon
so has part: feature:4257786-4258451:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4265269-4265337:-1:exon

position:4265269:-1
position: 4265269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4257786-4258451:-1:exon

position:4258451:-1
position: 4258451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121482109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LOC121482109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione S-transferase kappa 1-like
translation: MIGKSNGFSLTLVQGGKTYKYGKGPLPPTLELFYDVLSPLSWLGFEVLCRYKNIWNISLQLRPSLIAGIMKDSRKQLPALLPRKAQYLKNDIRLRGQHVQVPMQFPKDFFFVILDKGSLSAMRFLTAVTMKHPEMLEEVSRELWMRVWSRDEDITEPQSILAAAEKAGMSTEQAQGLLEKIVTPKVKNELKENTEAAGKYRAFGLPVTVAQLDGQTHMLFGSDRMELLGEKWMGPGPAAINPKL
SIO_010081: LOC121482109
subclass of: SO_0000673
so part of: LOC121482109
location: complement(join(4257786..4258451,4265269..4265337))
location: region:4257786-4265337:-1
so has part: feature:4265269-4265337:-1:exon
so has part: feature:4257786-4258451:-1:exon

XP_041595883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4265269-4265337:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4257786-4258451:-1:exon

LOC121482110
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482110
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4916457..4984260)
location: region:4916457-4984260:-1
so has part: feature:4916457-4984260:-1:exon

121482110
type: Gene
SIO_000068: ncbigene

position:4916457:-1
position: 4916457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4984260:-1
position: 4984260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4916457-4984260:-1:exon

LOC121482110
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482110
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
pseudo: true
SIO_010081: LOC121482110
subclass of: SO_0000673
so part of: LOC121482110
location: complement(4916457..4917071)
location: region:4916457-4917071:-1
so has part: feature:4916457-4917071:-1:exon

position:4917071:-1
position: 4917071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4916457-4917071:-1:exon

LOC121482110
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482110
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
pseudo: true
SIO_010081: LOC121482110
subclass of: SO_0000673
so part of: LOC121482110
location: complement(4921105..4921201)
location: region:4921105-4921201:-1
so has part: feature:4921105-4921201:-1:exon

position:4921105:-1
position: 4921105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4921201:-1
position: 4921201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4921105-4921201:-1:exon

LOC121482110
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482110
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
pseudo: true
SIO_010081: LOC121482110
subclass of: SO_0000673
so part of: LOC121482110
location: complement(4937961..4938066)
location: region:4937961-4938066:-1
so has part: feature:4937961-4938066:-1:exon

position:4937961:-1
position: 4937961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4938066:-1
position: 4938066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4937961-4938066:-1:exon

LOC121482110
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482110
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
pseudo: true
SIO_010081: LOC121482110
subclass of: SO_0000673
so part of: LOC121482110
location: complement(4984119..4984260)
location: region:4984119-4984260:-1
so has part: feature:4984119-4984260:-1:exon

position:4984119:-1
position: 4984119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4984119-4984260:-1:exon

LOC121482111
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482111
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5003124..5007846
location: region:5003124-5007846:1
so has part: feature:5003124-5007846:1:exon

121482111
type: Gene
SIO_000068: ncbigene

position:5003124:1
position: 5003124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5007846:1
position: 5007846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5003124-5007846:1:exon

LOC121482111
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482111
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC121482111
subclass of: SO_0000673
so part of: LOC121482111
location: 5003124..5003177
location: region:5003124-5003177:1
so has part: feature:5003124-5003177:1:exon

position:5003177:1
position: 5003177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5003124-5003177:1:exon

LOC121482111
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482111
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC121482111
subclass of: SO_0000673
so part of: LOC121482111
location: 5003269..5003827
location: region:5003269-5003827:1
so has part: feature:5003269-5003827:1:exon

position:5003269:1
position: 5003269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5003827:1
position: 5003827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5003269-5003827:1:exon

LOC121482111
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482111
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC121482111
subclass of: SO_0000673
so part of: LOC121482111
location: 5007743..5007846
location: region:5007743-5007846:1
so has part: feature:5007743-5007846:1:exon

position:5007743:1
position: 5007743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5007743-5007846:1:exon

LOC121481831
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121481831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5059615..5059860
location: region:5059615-5059860:1
so has part: feature:5059615-5059860:1:exon
subclass of: SO_0000010

121481831
type: Gene
SIO_000068: ncbigene

position:5059615:1
position: 5059615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5059860:1
position: 5059860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5059615-5059860:1:exon

LOC121481831
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LOC121481831
product: 40S ribosomal protein S27-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_041739373.1
SIO_010081: LOC121481831
subclass of: SO_0000673
so part of: LOC121481831
location: 5059615..5059860
location: region:5059615-5059860:1
so has part: feature:5059615-5059860:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5059615-5059860:1:exon

LOC121481831
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LOC121481831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S27-like
translation: MLIVKDIFHLSTEEEKKKHKKKCLVQSPNSYFIMDVKYPGCYKITTMFIYAHVVVLCVGCSTVLCQPTGGKARLTEGCSFS
SIO_010081: LOC121481831
subclass of: SO_0000673
so part of: LOC121481831
location: 5059615..5059860
location: region:5059615-5059860:1
so has part: feature:5059615-5059860:1:exon

XP_041595307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5059615-5059860:1:exon

LOC121482022
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5218379..5219754
location: region:5218379-5219754:1
so has part: feature:5218379-5219754:1:exon

121482022
type: Gene
SIO_000068: ncbigene

position:5218379:1
position: 5218379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5219754:1
position: 5219754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5218379-5219754:1:exon

LOC121482022
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482022
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121482022
subclass of: SO_0000673
so part of: LOC121482022
location: 5218379..5219754
location: region:5218379-5219754:1
so has part: feature:5218379-5219754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5218379-5219754:1:exon

LOC121482112
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482112
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5347552..5366934
location: region:5347552-5366934:1
so has part: feature:5347552-5366934:1:exon

121482112
type: Gene
SIO_000068: ncbigene

position:5347552:1
position: 5347552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5366934:1
position: 5366934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5347552-5366934:1:exon

LOC121482112
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482112
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121482112
subclass of: SO_0000673
so part of: LOC121482112
location: 5347552..5347666
location: region:5347552-5347666:1
so has part: feature:5347552-5347666:1:exon

position:5347666:1
position: 5347666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5347552-5347666:1:exon

LOC121482112
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482112
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121482112
subclass of: SO_0000673
so part of: LOC121482112
location: 5351537..5351711
location: region:5351537-5351711:1
so has part: feature:5351537-5351711:1:exon

position:5351537:1
position: 5351537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5351711:1
position: 5351711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5351537-5351711:1:exon

LOC121482112
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482112
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121482112
subclass of: SO_0000673
so part of: LOC121482112
location: 5365577..5366934
location: region:5365577-5366934:1
so has part: feature:5365577-5366934:1:exon

position:5365577:1
position: 5365577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5365577-5366934:1:exon

CNTNAP5
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: CNTNAP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5402512..6195056)
location: region:5402512-6195056:-1
so has part: feature:5402512-6195056:-1:exon
subclass of: SO_0000010

121482070
type: Gene
SIO_000068: ncbigene

position:5402512:-1
position: 5402512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6195056:-1
position: 6195056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5402512-6195056:-1:exon

CNTNAP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: CNTNAP5
product: contactin associated protein family member 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739874.1
SIO_010081: CNTNAP5
subclass of: SO_0000673
so part of: CNTNAP5
location: complement(join(5402512..5409817,5412393..5412464,5414151..5414369,5446882..5446969,5454760..5454890,5499102..5499323,5506951..5507190,5525325..5525543,5535354..5535524,5535695..5535822,5551069..5551225,5649909..5650109,5676636..5676755,5725226..5725332,5754696..5754867,5757668..5757817,5774447..5774711,5804582..5804725,5822674..5822858,5837540..5837743,5860479..5860626,5998739..5998932,6017544..6017648,6194630..6195056))
location: region:5402512-6195056:-1
so has part: feature:6194630-6195056:-1:exon
so has part: feature:6017544-6017648:-1:exon
so has part: feature:5998739-5998932:-1:exon
so has part: feature:5860479-5860626:-1:exon
so has part: feature:5837540-5837743:-1:exon
so has part: feature:5822674-5822858:-1:exon
so has part: feature:5804582-5804725:-1:exon
so has part: feature:5774447-5774711:-1:exon
so has part: feature:5757668-5757817:-1:exon
so has part: feature:5754696-5754867:-1:exon
so has part: feature:5725226-5725332:-1:exon
so has part: feature:5676636-5676755:-1:exon
so has part: feature:5649909-5650109:-1:exon
so has part: feature:5551069-5551225:-1:exon
so has part: feature:5535695-5535822:-1:exon
so has part: feature:5535354-5535524:-1:exon
so has part: feature:5525325-5525543:-1:exon
so has part: feature:5506951-5507190:-1:exon
so has part: feature:5499102-5499323:-1:exon
so has part: feature:5454760-5454890:-1:exon
so has part: feature:5446882-5446969:-1:exon
so has part: feature:5414151-5414369:-1:exon
so has part: feature:5412393-5412464:-1:exon
so has part: feature:5402512-5409817:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6194630-6195056:-1:exon

position:6194630:-1
position: 6194630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6017544-6017648:-1:exon

position:6017544:-1
position: 6017544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6017648:-1
position: 6017648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5998739-5998932:-1:exon

position:5998739:-1
position: 5998739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5998932:-1
position: 5998932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5860479-5860626:-1:exon

position:5860479:-1
position: 5860479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5860626:-1
position: 5860626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5837540-5837743:-1:exon

position:5837540:-1
position: 5837540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5837743:-1
position: 5837743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5822674-5822858:-1:exon

position:5822674:-1
position: 5822674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5822858:-1
position: 5822858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5804582-5804725:-1:exon

position:5804582:-1
position: 5804582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5804725:-1
position: 5804725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5774447-5774711:-1:exon

position:5774447:-1
position: 5774447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5774711:-1
position: 5774711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5757668-5757817:-1:exon

position:5757668:-1
position: 5757668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5757817:-1
position: 5757817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5754696-5754867:-1:exon

position:5754696:-1
position: 5754696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5754867:-1
position: 5754867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5725226-5725332:-1:exon

position:5725226:-1
position: 5725226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5725332:-1
position: 5725332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5676636-5676755:-1:exon

position:5676636:-1
position: 5676636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5676755:-1
position: 5676755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5649909-5650109:-1:exon

position:5649909:-1
position: 5649909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5650109:-1
position: 5650109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5551069-5551225:-1:exon

position:5551069:-1
position: 5551069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5551225:-1
position: 5551225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5535695-5535822:-1:exon

position:5535695:-1
position: 5535695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5535822:-1
position: 5535822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5535354-5535524:-1:exon

position:5535354:-1
position: 5535354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5535524:-1
position: 5535524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5525325-5525543:-1:exon

position:5525325:-1
position: 5525325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5525543:-1
position: 5525543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5506951-5507190:-1:exon

position:5506951:-1
position: 5506951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5507190:-1
position: 5507190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5499102-5499323:-1:exon

position:5499102:-1
position: 5499102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5499323:-1
position: 5499323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5454760-5454890:-1:exon

position:5454760:-1
position: 5454760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5454890:-1
position: 5454890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5446882-5446969:-1:exon

position:5446882:-1
position: 5446882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5446969:-1
position: 5446969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5414151-5414369:-1:exon

position:5414151:-1
position: 5414151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5414369:-1
position: 5414369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5412393-5412464:-1:exon

position:5412393:-1
position: 5412393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5412464:-1
position: 5412464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5402512-5409817:-1:exon

position:5409817:-1
position: 5409817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNTNAP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: CNTNAP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-associated protein-like 5 isoform X1
translation: MDPVPRLTSVFTLLLSSGLWHVGSSATNYNCDDPLASLLSPMAFSSSSDLTGTHSPAQLNRRVGTGGWSPADSNAQQWLQMDLGNRVEITAVATQGRYGSSDWVTSYSLMFSDTGRNWKQYKQEDSIWTFAGNMNADSVMHHKLLHSVRARFVRFVPLEWNPSGKIGMRVEVYGCSYKSDVADFDGRSSLLYRFNQKLMSTLKDVISLKFKSMQGDGVLFHGEGQRGDHITLELQKGRLALHLNLDDSKPRLSSSPPSVTLGSLLDDQHWHSVLIERVGKQVNFSVDKHTQHFRTKGEADALDIDYELSFGGIPVPGKPGTFLKKNFHGCIENLYYNGVNIIDLAKRRKHQIYTVGNVTFSCSEPQIVPITFVNSSSSYLLLPGTPQIDGLSVSFQFRTWNKDGLLLSTELSEGSGTLLLSLEGGTVRLVIQKRTERTAEILTGSSLNDGLWHSVSINARRDRITLSLDNDAASPAQDTTRVQIYSGNSYYFGGCPDNLTDSQCLNPIKAFQGCMRLIFIDNQPKDLISVQQGSLGNFSDLHIDLCSIKDRCLPNYCEHGGFCSQSWTTFYCNCSNTGYTGATCHNSLYEQSCEVYRHQGNTAGFFYIDSDGSGPLGPLQVYCNITEDKIWTSVQHNNTELTHVRGANPEKPYTMALDYGGSMEQLEAMIDSSEHCEQEVAYHCRRSRLLNTPDGTPFTWWIGRSNEKHPYWGGAPPGVQQCECGLDESCLDVRHFCNCDADKDEWTNDTGFLSFKDHLPVTQIVITDTNRSNSEAAWRIGPLRCYGDRHFWNAVSFYTEASYLHFPTFHAEFSADISFFFKTTALSGVFLENLGIKDFIRLEISSPSEITFAIDVGNGPVELIVHSPSLLNDNQWHYVRAERNLKETSLQVDSLPRMTRETSEEGHFRLQLNSQLFVGGTSSRQKGFLGCIRSLHLNGQKLDLEERAKVTSGVRPGCPGHCSTYGSICHNGGKCVEKYSGYFCDCTNSPYEGPFCKKEVSAVFEAGTSVTYMFQEPYPVTKNISLSSSAIYADAAPSKENIAFSFVTAQAPSLLLYINSSQDYLAVLLCKNGSLQVRYQLSKEETQVFNIDAENFANRRMHQLKINREGRELAIQVDHQLRLSYNFSSEVEFRAIRSLTLGKVREHLGLDSEIAKANTLGFVGCLSSVQYNQVAPLKAALRHATIAPVTVQGTLMESSCGSMVDVDVNTVTTVHSSSDPFGKTDEREPLTNAVRSDSAVIGGVIAVVIFIIFSIIGIMTRFLYQHKQSHRTNQMKEKEYPENLDSSFRNDIDLQNTVSECKREYFI
SIO_010081: CNTNAP5
subclass of: SO_0000673
so part of: CNTNAP5
location: complement(join(5409621..5409817,5412393..5412464,5414151..5414369,5446882..5446969,5454760..5454890,5499102..5499323,5506951..5507190,5525325..5525543,5535354..5535524,5535695..5535822,5551069..5551225,5649909..5650109,5676636..5676755,5725226..5725332,5754696..5754867,5757668..5757817,5774447..5774711,5804582..5804725,5822674..5822858,5837540..5837743,5860479..5860626,5998739..5998932,6017544..6017648,6194630..6194714))
location: region:5409621-6194714:-1
so has part: feature:6194630-6194714:-1:exon
so has part: feature:6017544-6017648:-1:exon
so has part: feature:5998739-5998932:-1:exon
so has part: feature:5860479-5860626:-1:exon
so has part: feature:5837540-5837743:-1:exon
so has part: feature:5822674-5822858:-1:exon
so has part: feature:5804582-5804725:-1:exon
so has part: feature:5774447-5774711:-1:exon
so has part: feature:5757668-5757817:-1:exon
so has part: feature:5754696-5754867:-1:exon
so has part: feature:5725226-5725332:-1:exon
so has part: feature:5676636-5676755:-1:exon
so has part: feature:5649909-5650109:-1:exon
so has part: feature:5551069-5551225:-1:exon
so has part: feature:5535695-5535822:-1:exon
so has part: feature:5535354-5535524:-1:exon
so has part: feature:5525325-5525543:-1:exon
so has part: feature:5506951-5507190:-1:exon
so has part: feature:5499102-5499323:-1:exon
so has part: feature:5454760-5454890:-1:exon
so has part: feature:5446882-5446969:-1:exon
so has part: feature:5414151-5414369:-1:exon
so has part: feature:5412393-5412464:-1:exon
so has part: feature:5409621-5409817:-1:exon

XP_041595808.1
type: Protein
SIO_000068: ncbiprotein

position:5409621:-1
position: 5409621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6194714:-1
position: 6194714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6194630-6194714:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6017544-6017648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5998739-5998932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5860479-5860626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5837540-5837743:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5822674-5822858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5804582-5804725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5774447-5774711:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5757668-5757817:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5754696-5754867:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5725226-5725332:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5676636-5676755:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5649909-5650109:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5551069-5551225:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5535695-5535822:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5535354-5535524:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5525325-5525543:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5506951-5507190:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5499102-5499323:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5454760-5454890:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5446882-5446969:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5414151-5414369:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5412393-5412464:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5409621-5409817:-1:exon

CNTNAP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: CNTNAP5
product: contactin associated protein family member 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739876.1
SIO_010081: CNTNAP5
subclass of: SO_0000673
so part of: CNTNAP5
location: complement(join(5486317..5488686,5499102..5499323,5506951..5507190,5525325..5525543,5535354..5535524,5535695..5535822,5551069..5551225,5649909..5650109,5676636..5676755,5725226..5725332,5754696..5754867,5757668..5757817,5774447..5774711,5804582..5804725,5822674..5822858,5837540..5837743,5860479..5860626,5998739..5998932,6017544..6017648,6194630..6195056))
location: region:5486317-6195056:-1
so has part: feature:6194630-6195056:-1:exon
so has part: feature:6017544-6017648:-1:exon
so has part: feature:5998739-5998932:-1:exon
so has part: feature:5860479-5860626:-1:exon
so has part: feature:5837540-5837743:-1:exon
so has part: feature:5822674-5822858:-1:exon
so has part: feature:5804582-5804725:-1:exon
so has part: feature:5774447-5774711:-1:exon
so has part: feature:5757668-5757817:-1:exon
so has part: feature:5754696-5754867:-1:exon
so has part: feature:5725226-5725332:-1:exon
so has part: feature:5676636-5676755:-1:exon
so has part: feature:5649909-5650109:-1:exon
so has part: feature:5551069-5551225:-1:exon
so has part: feature:5535695-5535822:-1:exon
so has part: feature:5535354-5535524:-1:exon
so has part: feature:5525325-5525543:-1:exon
so has part: feature:5506951-5507190:-1:exon
so has part: feature:5499102-5499323:-1:exon
so has part: feature:5486317-5488686:-1:exon

position:5486317:-1
position: 5486317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6194630-6195056:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6017544-6017648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5998739-5998932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5860479-5860626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5837540-5837743:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5822674-5822858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5804582-5804725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5774447-5774711:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5757668-5757817:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5754696-5754867:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5725226-5725332:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5676636-5676755:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5649909-5650109:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5551069-5551225:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5535695-5535822:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5535354-5535524:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5525325-5525543:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5506951-5507190:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5499102-5499323:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5486317-5488686:-1:exon

position:5488686:-1
position: 5488686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNTNAP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: CNTNAP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-associated protein-like 5 isoform X3
translation: MDPVPRLTSVFTLLLSSGLWHVGSSATNYNCDDPLASLLSPMAFSSSSDLTGTHSPAQLNRRVGTGGWSPADSNAQQWLQMDLGNRVEITAVATQGRYGSSDWVTSYSLMFSDTGRNWKQYKQEDSIWTFAGNMNADSVMHHKLLHSVRARFVRFVPLEWNPSGKIGMRVEVYGCSYKSDVADFDGRSSLLYRFNQKLMSTLKDVISLKFKSMQGDGVLFHGEGQRGDHITLELQKGRLALHLNLDDSKPRLSSSPPSVTLGSLLDDQHWHSVLIERVGKQVNFSVDKHTQHFRTKGEADALDIDYELSFGGIPVPGKPGTFLKKNFHGCIENLYYNGVNIIDLAKRRKHQIYTVGNVTFSCSEPQIVPITFVNSSSSYLLLPGTPQIDGLSVSFQFRTWNKDGLLLSTELSEGSGTLLLSLEGGTVRLVIQKRTERTAEILTGSSLNDGLWHSVSINARRDRITLSLDNDAASPAQDTTRVQIYSGNSYYFGGCPDNLTDSQCLNPIKAFQGCMRLIFIDNQPKDLISVQQGSLGNFSDLHIDLCSIKDRCLPNYCEHGGFCSQSWTTFYCNCSNTGYTGATCHNSLYEQSCEVYRHQGNTAGFFYIDSDGSGPLGPLQVYCNITEDKIWTSVQHNNTELTHVRGANPEKPYTMALDYGGSMEQLEAMIDSSEHCEQEVAYHCRRSRLLNTPDGTPFTWWIGRSNEKHPYWGGAPPGVQQCECGLDESCLDVRHFCNCDADKDEWTNDTGFLSFKDHLPVTQIVITDTNRSNSEAAWRIGPLRCYGDRHFWNAVSFYTEASYLHFPTFHAEFSADISFFFKTTALSGVFLENLGIKDFIRLEISSPSEITFAIDVGNGPVELIVHSPSLLNDNQWHYVRAERNLKETSLQVDSLPRMTRETSEEGHFRLQLNSQLFVGGTSSRQKGFLGCIRSLHLNGQKLDLEERAKVTSGVRPGCPGHCSTYGSICHNGGKCVEKYSGYFCDCTNSPYEGPFCKKEVSAVFEAGTSVTYMFQEPYPVTKNISLSSSAIYADAAPSKENIAFSFVTAQAPSLLLYINSSQDYLAVLLCKNGDERVFHRRTEQLHEKYM
SIO_010081: CNTNAP5
subclass of: SO_0000673
so part of: CNTNAP5
location: complement(join(5488631..5488686,5499102..5499323,5506951..5507190,5525325..5525543,5535354..5535524,5535695..5535822,5551069..5551225,5649909..5650109,5676636..5676755,5725226..5725332,5754696..5754867,5757668..5757817,5774447..5774711,5804582..5804725,5822674..5822858,5837540..5837743,5860479..5860626,5998739..5998932,6017544..6017648,6194630..6194714))
location: region:5488631-6194714:-1
so has part: feature:6194630-6194714:-1:exon
so has part: feature:6017544-6017648:-1:exon
so has part: feature:5998739-5998932:-1:exon
so has part: feature:5860479-5860626:-1:exon
so has part: feature:5837540-5837743:-1:exon
so has part: feature:5822674-5822858:-1:exon
so has part: feature:5804582-5804725:-1:exon
so has part: feature:5774447-5774711:-1:exon
so has part: feature:5757668-5757817:-1:exon
so has part: feature:5754696-5754867:-1:exon
so has part: feature:5725226-5725332:-1:exon
so has part: feature:5676636-5676755:-1:exon
so has part: feature:5649909-5650109:-1:exon
so has part: feature:5551069-5551225:-1:exon
so has part: feature:5535695-5535822:-1:exon
so has part: feature:5535354-5535524:-1:exon
so has part: feature:5525325-5525543:-1:exon
so has part: feature:5506951-5507190:-1:exon
so has part: feature:5499102-5499323:-1:exon
so has part: feature:5488631-5488686:-1:exon

XP_041595810.1
type: Protein
SIO_000068: ncbiprotein

position:5488631:-1
position: 5488631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6194630-6194714:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6017544-6017648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5998739-5998932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5860479-5860626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5837540-5837743:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5822674-5822858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5804582-5804725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5774447-5774711:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5757668-5757817:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5754696-5754867:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5725226-5725332:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5676636-5676755:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5649909-5650109:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5551069-5551225:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5535695-5535822:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5535354-5535524:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5525325-5525543:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5506951-5507190:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5499102-5499323:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5488631-5488686:-1:exon

CNTNAP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: CNTNAP5
product: contactin associated protein family member 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041739875.1
SIO_010081: CNTNAP5
subclass of: SO_0000673
so part of: CNTNAP5
location: complement(join(5494400..5495106,5499102..5499323,5506951..5507190,5525325..5525543,5535354..5535524,5535695..5535822,5551069..5551225,5649909..5650109,5676636..5676755,5725226..5725332,5754696..5754867,5757668..5757817,5774447..5774711,5804582..5804725,5822674..5822858,5837540..5837743,5860479..5860626,5998739..5998932,6017544..6017648,6194630..6195056))
location: region:5494400-6195056:-1
so has part: feature:6194630-6195056:-1:exon
so has part: feature:6017544-6017648:-1:exon
so has part: feature:5998739-5998932:-1:exon
so has part: feature:5860479-5860626:-1:exon
so has part: feature:5837540-5837743:-1:exon
so has part: feature:5822674-5822858:-1:exon
so has part: feature:5804582-5804725:-1:exon
so has part: feature:5774447-5774711:-1:exon
so has part: feature:5757668-5757817:-1:exon
so has part: feature:5754696-5754867:-1:exon
so has part: feature:5725226-5725332:-1:exon
so has part: feature:5676636-5676755:-1:exon
so has part: feature:5649909-5650109:-1:exon
so has part: feature:5551069-5551225:-1:exon
so has part: feature:5535695-5535822:-1:exon
so has part: feature:5535354-5535524:-1:exon
so has part: feature:5525325-5525543:-1:exon
so has part: feature:5506951-5507190:-1:exon
so has part: feature:5499102-5499323:-1:exon
so has part: feature:5494400-5495106:-1:exon

position:5494400:-1
position: 5494400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6194630-6195056:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6017544-6017648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5998739-5998932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5860479-5860626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5837540-5837743:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5822674-5822858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5804582-5804725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5774447-5774711:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5757668-5757817:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5754696-5754867:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5725226-5725332:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5676636-5676755:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5649909-5650109:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5551069-5551225:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5535695-5535822:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5535354-5535524:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5525325-5525543:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5506951-5507190:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5499102-5499323:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5494400-5495106:-1:exon

position:5495106:-1
position: 5495106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNTNAP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: CNTNAP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-associated protein-like 5 isoform X2
translation: MDPVPRLTSVFTLLLSSGLWHVGSSATNYNCDDPLASLLSPMAFSSSSDLTGTHSPAQLNRRVGTGGWSPADSNAQQWLQMDLGNRVEITAVATQGRYGSSDWVTSYSLMFSDTGRNWKQYKQEDSIWTFAGNMNADSVMHHKLLHSVRARFVRFVPLEWNPSGKIGMRVEVYGCSYKSDVADFDGRSSLLYRFNQKLMSTLKDVISLKFKSMQGDGVLFHGEGQRGDHITLELQKGRLALHLNLDDSKPRLSSSPPSVTLGSLLDDQHWHSVLIERVGKQVNFSVDKHTQHFRTKGEADALDIDYELSFGGIPVPGKPGTFLKKNFHGCIENLYYNGVNIIDLAKRRKHQIYTVGNVTFSCSEPQIVPITFVNSSSSYLLLPGTPQIDGLSVSFQFRTWNKDGLLLSTELSEGSGTLLLSLEGGTVRLVIQKRTERTAEILTGSSLNDGLWHSVSINARRDRITLSLDNDAASPAQDTTRVQIYSGNSYYFGGCPDNLTDSQCLNPIKAFQGCMRLIFIDNQPKDLISVQQGSLGNFSDLHIDLCSIKDRCLPNYCEHGGFCSQSWTTFYCNCSNTGYTGATCHNSLYEQSCEVYRHQGNTAGFFYIDSDGSGPLGPLQVYCNITEDKIWTSVQHNNTELTHVRGANPEKPYTMALDYGGSMEQLEAMIDSSEHCEQEVAYHCRRSRLLNTPDGTPFTWWIGRSNEKHPYWGGAPPGVQQCECGLDESCLDVRHFCNCDADKDEWTNDTGFLSFKDHLPVTQIVITDTNRSNSEAAWRIGPLRCYGDRHFWNAVSFYTEASYLHFPTFHAEFSADISFFFKTTALSGVFLENLGIKDFIRLEISSPSEITFAIDVGNGPVELIVHSPSLLNDNQWHYVRAERNLKETSLQVDSLPRMTRETSEEGHFRLQLNSQLFVGGTSSRQKGFLGCIRSLHLNGQKLDLEERAKVTSGVRPGCPGHCSTYGSICHNGGKCVEKYSGYFCDCTNSPYEGPFCKKEVSAVFEAGTSVTYMFQEPYPVTKNISLSSSAIYADAAPSKENIAFSFVTAQAPSLLLYINSSQDYLAVLLCKNGGRKCPWPCHTKWLQFQHCGLRSQEVETSG
SIO_010081: CNTNAP5
subclass of: SO_0000673
so part of: CNTNAP5
location: complement(join(5495015..5495106,5499102..5499323,5506951..5507190,5525325..5525543,5535354..5535524,5535695..5535822,5551069..5551225,5649909..5650109,5676636..5676755,5725226..5725332,5754696..5754867,5757668..5757817,5774447..5774711,5804582..5804725,5822674..5822858,5837540..5837743,5860479..5860626,5998739..5998932,6017544..6017648,6194630..6194714))
location: region:5495015-6194714:-1
so has part: feature:6194630-6194714:-1:exon
so has part: feature:6017544-6017648:-1:exon
so has part: feature:5998739-5998932:-1:exon
so has part: feature:5860479-5860626:-1:exon
so has part: feature:5837540-5837743:-1:exon
so has part: feature:5822674-5822858:-1:exon
so has part: feature:5804582-5804725:-1:exon
so has part: feature:5774447-5774711:-1:exon
so has part: feature:5757668-5757817:-1:exon
so has part: feature:5754696-5754867:-1:exon
so has part: feature:5725226-5725332:-1:exon
so has part: feature:5676636-5676755:-1:exon
so has part: feature:5649909-5650109:-1:exon
so has part: feature:5551069-5551225:-1:exon
so has part: feature:5535695-5535822:-1:exon
so has part: feature:5535354-5535524:-1:exon
so has part: feature:5525325-5525543:-1:exon
so has part: feature:5506951-5507190:-1:exon
so has part: feature:5499102-5499323:-1:exon
so has part: feature:5495015-5495106:-1:exon

XP_041595809.1
type: Protein
SIO_000068: ncbiprotein

position:5495015:-1
position: 5495015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6194630-6194714:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6017544-6017648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5998739-5998932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5860479-5860626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5837540-5837743:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5822674-5822858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5804582-5804725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5774447-5774711:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5757668-5757817:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5754696-5754867:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5725226-5725332:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5676636-5676755:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5649909-5650109:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5551069-5551225:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5535695-5535822:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5535354-5535524:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5525325-5525543:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5506951-5507190:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5499102-5499323:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5495015-5495106:-1:exon

LOC121482132
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482132
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6195207..6198005
location: region:6195207-6198005:1
so has part: feature:6195207-6198005:1:exon
subclass of: SO_0000011

121482132
type: Gene
SIO_000068: ncbigene

position:6195207:1
position: 6195207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6198005:1
position: 6198005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6195207-6198005:1:exon

LOC121482132
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: lncRNA
gene: LOC121482132
product: uncharacterized LOC121482132, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005985515.1
SIO_010081: LOC121482132
subclass of: SO_0000673
so part of: LOC121482132
location: join(6195207..6195490,6195948..6196192,6197959..6198005)
location: region:6195207-6198005:1
so has part: feature:6195207-6195490:1:exon
so has part: feature:6195948-6196192:1:exon
so has part: feature:6197959-6198005:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6195207-6195490:1:exon

position:6195490:1
position: 6195490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6195948-6196192:1:exon

position:6195948:1
position: 6195948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6196192:1
position: 6196192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6197959-6198005:1:exon

position:6197959:1
position: 6197959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121482132
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: lncRNA
gene: LOC121482132
product: uncharacterized LOC121482132, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005985516.1
SIO_010081: LOC121482132
subclass of: SO_0000673
so part of: LOC121482132
location: join(6195207..6195490,6195948..6196192,6196598..6196684)
location: region:6195207-6196684:1
so has part: feature:6195207-6195490:1:exon
so has part: feature:6195948-6196192:1:exon
so has part: feature:6196598-6196684:1:exon

position:6196684:1
position: 6196684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6195207-6195490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6195948-6196192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6196598-6196684:1:exon

position:6196598:1
position: 6196598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121482041
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6400538..6402453
location: region:6400538-6402453:1
so has part: feature:6400538-6402453:1:exon

121482041
type: Gene
SIO_000068: ncbigene

position:6400538:1
position: 6400538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6402453:1
position: 6402453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6400538-6402453:1:exon

LOC121482041
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482041
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121482041
subclass of: SO_0000673
so part of: LOC121482041
location: 6400538..6402453
location: region:6400538-6402453:1
so has part: feature:6400538-6402453:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6400538-6402453:1:exon

LOC121482113
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482113
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6577506..6582527
location: region:6577506-6582527:1
so has part: feature:6577506-6582527:1:exon

121482113
type: Gene
SIO_000068: ncbigene

position:6577506:1
position: 6577506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6582527:1
position: 6582527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6577506-6582527:1:exon

LOC121482113
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482113
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC121482113
subclass of: SO_0000673
so part of: LOC121482113
location: 6577506..6577581
location: region:6577506-6577581:1
so has part: feature:6577506-6577581:1:exon

position:6577581:1
position: 6577581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6577506-6577581:1:exon

LOC121482113
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482113
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC121482113
subclass of: SO_0000673
so part of: LOC121482113
location: 6580454..6581707
location: region:6580454-6581707:1
so has part: feature:6580454-6581707:1:exon

position:6580454:1
position: 6580454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6581707:1
position: 6581707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6580454-6581707:1:exon

LOC121482113
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482113
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC121482113
subclass of: SO_0000673
so part of: LOC121482113
location: 6581811..6582527
location: region:6581811-6582527:1
so has part: feature:6581811-6582527:1:exon

position:6581811:1
position: 6581811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6581811-6582527:1:exon

LOC121482114
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6971096..7007509
location: region:6971096-7007509:1
so has part: feature:6971096-7007509:1:exon
subclass of: SO_0000010

121482114
type: Gene
SIO_000068: ncbigene

position:6971096:1
position: 6971096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7007509:1
position: 7007509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6971096-7007509:1:exon

LOC121482114
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LOC121482114
product: synaptosomal-associated protein 23-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_041739951.1
SIO_010081: LOC121482114
subclass of: SO_0000673
so part of: LOC121482114
location: join(6971096..6971416,7007147..7007509)
location: region:6971096-7007509:1
so has part: feature:6971096-6971416:1:exon
so has part: feature:7007147-7007509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6971096-6971416:1:exon

position:6971416:1
position: 6971416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7007147-7007509:1:exon

position:7007147:1
position: 7007147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121482114
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LOC121482114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptosomal-associated protein 23-like
translation: MSFMPRLHESSSLRIAAGGEMGHEVGEVKRTNTNAKWFNSNLGTVLRQHTPLLVSMASPSDRPCESTGRYNCLKRGQDQVASSGSLTPPIFPLTTLLPKRRMPHTVKNSESSNVYKATWGDGKDNTLSNVVCSQPGRVTNGQLQQATTGTANSRSIQLRTNDARDDEIEENLTQVGSILGHWKNKALDMGSGVEATDPQIDWITEKAGINKDRIDFASARAKKFIAS
SIO_010081: LOC121482114
subclass of: SO_0000673
so part of: LOC121482114
location: join(6971096..6971416,7007147..7007509)
location: region:6971096-7007509:1
so has part: feature:6971096-6971416:1:exon
so has part: feature:7007147-7007509:1:exon

XP_041595885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6971096-6971416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7007147-7007509:1:exon

LOC121482116
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482116
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7879030..7879272)
location: region:7879030-7879272:-1
so has part: feature:7879030-7879272:-1:exon
subclass of: SO_0000010

121482116
type: Gene
SIO_000068: ncbigene

position:7879030:-1
position: 7879030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7879272:-1
position: 7879272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7879030-7879272:-1:exon

LOC121482116
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LOC121482116
product: 40S ribosomal protein S27-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins
transcript id: XM_041739953.1
SIO_010081: LOC121482116
subclass of: SO_0000673
so part of: LOC121482116
location: complement(7879030..7879272)
location: region:7879030-7879272:-1
so has part: feature:7879030-7879272:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7879030-7879272:-1:exon

LOC121482116
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LOC121482116
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S27-like
translation: MPLVKDLLHSSPEEKRKHKKKHLVQTPNSYFVDMKCPGCYKITTAFIHAQTVVLCVGCSTVLCQPIGDARLTEGCSFRWK
SIO_010081: LOC121482116
subclass of: SO_0000673
so part of: LOC121482116
location: complement(7879030..7879272)
location: region:7879030-7879272:-1
so has part: feature:7879030-7879272:-1:exon

XP_041595887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7879030-7879272:-1:exon

TSN
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: TSN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8247193..8256071)
location: region:8247193-8256071:-1
so has part: feature:8247193-8256071:-1:exon
subclass of: SO_0000010

121481954
type: Gene
SIO_000068: ncbigene

position:8247193:-1
position: 8247193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8256071:-1
position: 8256071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8247193-8256071:-1:exon

TSN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: TSN
product: translin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739656.1
SIO_010081: TSN
subclass of: SO_0000673
so part of: TSN
location: complement(join(8247193..8249371,8250776..8250855,8251485..8251600,8253520..8253616,8254567..8254660,8255840..8256052))
location: region:8247193-8256052:-1
so has part: feature:8255840-8256052:-1:exon
so has part: feature:8254567-8254660:-1:exon
so has part: feature:8253520-8253616:-1:exon
so has part: feature:8251485-8251600:-1:exon
so has part: feature:8250776-8250855:-1:exon
so has part: feature:8247193-8249371:-1:exon

position:8256052:-1
position: 8256052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8255840-8256052:-1:exon

position:8255840:-1
position: 8255840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8254567-8254660:-1:exon

position:8254567:-1
position: 8254567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8254660:-1
position: 8254660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8253520-8253616:-1:exon

position:8253520:-1
position: 8253520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8253616:-1
position: 8253616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8251485-8251600:-1:exon

position:8251485:-1
position: 8251485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8251600:-1
position: 8251600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8250776-8250855:-1:exon

position:8250776:-1
position: 8250776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8250855:-1
position: 8250855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8247193-8249371:-1:exon

position:8249371:-1
position: 8249371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: TSN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translin isoform X1
translation: MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLESETLVTREAVTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACAEK
SIO_010081: TSN
subclass of: SO_0000673
so part of: TSN
location: complement(join(8249138..8249371,8250776..8250855,8251485..8251600,8253520..8253616,8254567..8254660,8255840..8255905))
location: region:8249138-8255905:-1
so has part: feature:8255840-8255905:-1:exon
so has part: feature:8254567-8254660:-1:exon
so has part: feature:8253520-8253616:-1:exon
so has part: feature:8251485-8251600:-1:exon
so has part: feature:8250776-8250855:-1:exon
so has part: feature:8249138-8249371:-1:exon

XP_041595590.1
type: Protein
SIO_000068: ncbiprotein

position:8249138:-1
position: 8249138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8255905:-1
position: 8255905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8255840-8255905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8254567-8254660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8253520-8253616:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8251485-8251600:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8250776-8250855:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8249138-8249371:-1:exon

TSN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: TSN
product: translin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041739657.1
SIO_010081: TSN
subclass of: SO_0000673
so part of: TSN
location: complement(join(8249152..8249371,8251485..8251600,8253520..8253616,8254567..8254660,8255840..8256071))
location: region:8249152-8256071:-1
so has part: feature:8255840-8256071:-1:exon
so has part: feature:8254567-8254660:-1:exon
so has part: feature:8253520-8253616:-1:exon
so has part: feature:8251485-8251600:-1:exon
so has part: feature:8249152-8249371:-1:exon

position:8249152:-1
position: 8249152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8255840-8256071:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8254567-8254660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8253520-8253616:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8251485-8251600:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8249152-8249371:-1:exon

TSN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: TSN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translin isoform X2
translation: MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLESETLVTREAVTEILGIEAVCEQCDCWRLLSAPPHLHLHQ
SIO_010081: TSN
subclass of: SO_0000673
so part of: TSN
location: complement(join(8249298..8249371,8251485..8251600,8253520..8253616,8254567..8254660,8255840..8255905))
location: region:8249298-8255905:-1
so has part: feature:8255840-8255905:-1:exon
so has part: feature:8254567-8254660:-1:exon
so has part: feature:8253520-8253616:-1:exon
so has part: feature:8251485-8251600:-1:exon
so has part: feature:8249298-8249371:-1:exon

XP_041595591.1
type: Protein
SIO_000068: ncbiprotein

position:8249298:-1
position: 8249298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8255840-8255905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8254567-8254660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8253520-8253616:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8251485-8251600:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8249298-8249371:-1:exon

LOC121481955
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121481955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8255907..8258439
location: region:8255907-8258439:1
so has part: feature:8255907-8258439:1:exon
subclass of: SO_0000010

121481955
type: Gene
SIO_000068: ncbigene

position:8255907:1
position: 8255907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8258439:1
position: 8258439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8255907-8258439:1:exon

LOC121481955
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LOC121481955
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739658.1
SIO_010081: LOC121481955
subclass of: SO_0000673
so part of: LOC121481955
location: join(8255907..8256412,8256645..8258439)
location: region:8255907-8258439:1
so has part: feature:8255907-8256412:1:exon
so has part: feature:8256645-8258439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8255907-8256412:1:exon

position:8256412:1
position: 8256412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8256645-8258439:1:exon

position:8256645:1
position: 8256645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121481955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LOC121481955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like
translation: MRRPHPRPGSRGARPGGGAEGSGRGFQRGLFGQASPRTARAVGSPQGRGRLGGGAGGARLRLPASGFRLPASGFVLCRGRGEGDAFRGRRERARAQAGAGGAPLEAGALRIPRPCSFPYLDPQTGLSVPAAGPPGRRPPERRVRAEVERLQLGGRRLSD
SIO_010081: LOC121481955
subclass of: SO_0000673
so part of: LOC121481955
location: join(8256109..8256412,8256645..8256820)
location: region:8256109-8256820:1
so has part: feature:8256109-8256412:1:exon
so has part: feature:8256645-8256820:1:exon

XP_041595592.1
type: Protein
SIO_000068: ncbiprotein

position:8256109:1
position: 8256109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8256820:1
position: 8256820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8256109-8256412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8256645-8256820:1:exon

NIFK
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: NIFK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8265199..8277451
location: region:8265199-8277451:1
so has part: feature:8265199-8277451:1:exon
subclass of: SO_0000010

121481773
type: Gene
SIO_000068: ncbigene

position:8265199:1
position: 8265199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8277451:1
position: 8277451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8265199-8277451:1:exon

NIFK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: NIFK
product: nucleolar protein interacting with the FHA domain of MKI67
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041739266.1
SIO_010081: NIFK
subclass of: SO_0000673
so part of: NIFK
location: join(8265199..8265366,8265878..8266015,8270824..8270932,8272959..8273170,8274363..8274425,8275224..8275298,8276678..8277451)
location: region:8265199-8277451:1
so has part: feature:8265199-8265366:1:exon
so has part: feature:8265878-8266015:1:exon
so has part: feature:8270824-8270932:1:exon
so has part: feature:8272959-8273170:1:exon
so has part: feature:8274363-8274425:1:exon
so has part: feature:8275224-8275298:1:exon
so has part: feature:8276678-8277451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8265199-8265366:1:exon

position:8265366:1
position: 8265366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8265878-8266015:1:exon

position:8265878:1
position: 8265878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8266015:1
position: 8266015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8270824-8270932:1:exon

position:8270824:1
position: 8270824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8270932:1
position: 8270932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8272959-8273170:1:exon

position:8272959:1
position: 8272959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8273170:1
position: 8273170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8274363-8274425:1:exon

position:8274363:1
position: 8274363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8274425:1
position: 8274425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8275224-8275298:1:exon

position:8275224:1
position: 8275224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8275298:1
position: 8275298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8276678-8277451:1:exon

position:8276678:1
position: 8276678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NIFK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: NIFK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MKI67 FHA domain-interacting nucleolar phosphoprotein
translation: MAAFAGPAKPFLSLDPQQEAKFRKEVTQARRRAAQQKEKEKLTPGVIYVGHLPPALYETQIRAYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFASEDVAKIVADTMNNYLFGERLLQCHFIPPEKVHEELFREWYIPFKKPSYPAVKRYNQNRTLLQKLRMEERFKKKEKLLRKKLAKKGIDYDFPSLILHKKEKNASNTGLQKPTDSQVLSKKKKKKKSSRTTTTPEKTVDSQGSTPVCTPAFLEKRKSEAAKINVDDEDNEIVFKQPVPGVKEETQETQTPTCSRKKRRRKSNQ
SIO_010081: NIFK
subclass of: SO_0000673
so part of: NIFK
location: join(8265262..8265366,8265878..8266015,8270824..8270932,8272959..8273170,8274363..8274425,8275224..8275298,8276678..8276866)
location: region:8265262-8276866:1
so has part: feature:8265262-8265366:1:exon
so has part: feature:8265878-8266015:1:exon
so has part: feature:8270824-8270932:1:exon
so has part: feature:8272959-8273170:1:exon
so has part: feature:8274363-8274425:1:exon
so has part: feature:8275224-8275298:1:exon
so has part: feature:8276678-8276866:1:exon

XP_041595200.1
type: Protein
SIO_000068: ncbiprotein

position:8265262:1
position: 8265262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8276866:1
position: 8276866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8265262-8265366:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8265878-8266015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8270824-8270932:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8272959-8273170:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8274363-8274425:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8275224-8275298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8276678-8276866:1:exon

LOC121482118
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482118
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8279106..8280510
location: region:8279106-8280510:1
so has part: feature:8279106-8280510:1:exon

121482118
type: Gene
SIO_000068: ncbigene

position:8279106:1
position: 8279106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8280510:1
position: 8280510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8279106-8280510:1:exon

LOC121482118
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482118
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 28% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121482118
subclass of: SO_0000673
so part of: LOC121482118
location: 8279106..8279285
location: region:8279106-8279285:1
so has part: feature:8279106-8279285:1:exon

position:8279285:1
position: 8279285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8279106-8279285:1:exon

LOC121482118
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121482118
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 28% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121482118
subclass of: SO_0000673
so part of: LOC121482118
location: 8279988..8280510
location: region:8279988-8280510:1
so has part: feature:8279988-8280510:1:exon

position:8279988:1
position: 8279988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8279988-8280510:1:exon

LOC121482211
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121482211
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8324603..8324706)
location: region:8324603-8324706:-1
so has part: feature:8324603-8324706:-1:exon
subclass of: SO_0000623

121482211
type: Gene
SIO_000068: ncbigene

position:8324603:-1
position: 8324603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8324706:-1
position: 8324706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8324603-8324706:-1:exon

LOC121482211
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: snRNA
gene: LOC121482211
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005985561.1
SIO_010081: LOC121482211
subclass of: SO_0000673
so part of: LOC121482211
location: complement(8324603..8324706)
location: region:8324603-8324706:-1
so has part: feature:8324603-8324706:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8324603-8324706:-1:exon

CLASP1
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: CLASP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8340063..8603893
location: region:8340063-8603893:1
so has part: feature:8340063-8603893:1:exon
subclass of: SO_0000010

121482085
type: Gene
SIO_000068: ncbigene

position:8340063:1
position: 8340063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8603893:1
position: 8603893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8340063-8603893:1:exon

CLASP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: CLASP1
product: cytoplasmic linker associated protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041739917.1
SIO_010081: CLASP1
subclass of: SO_0000673
so part of: CLASP1
location: join(8340063..8340203,8372513..8372992,8431251..8431329,8432672..8432775,8434167..8434258,8436061..8436136,8440875..8440972,8452722..8452789,8483361..8483513,8486288..8486361,8487518..8487610,8488491..8488636,8489685..8489820,8490864..8490934,8494779..8494838,8500870..8500947,8502698..8502865,8503398..8503447,8504298..8504468,8506319..8506366,8506836..8506859,8519115..8519219,8521514..8521540,8523314..8523481,8537068..8537171,8539169..8539192,8540581..8540825,8542653..8542716,8545126..8545128,8545269..8545432,8549326..8549404,8550425..8550568,8558698..8558841,8559628..8559734,8563584..8563700,8568460..8568610,8572364..8572610,8574067..8574257,8575973..8576101,8590160..8590366,8591964..8592080,8600674..8603893)
location: region:8340063-8603893:1
so has part: feature:8340063-8340203:1:exon
so has part: feature:8372513-8372992:1:exon
so has part: feature:8431251-8431329:1:exon
so has part: feature:8432672-8432775:1:exon
so has part: feature:8434167-8434258:1:exon
so has part: feature:8436061-8436136:1:exon
so has part: feature:8440875-8440972:1:exon
so has part: feature:8452722-8452789:1:exon
so has part: feature:8483361-8483513:1:exon
so has part: feature:8486288-8486361:1:exon
so has part: feature:8487518-8487610:1:exon
so has part: feature:8488491-8488636:1:exon
so has part: feature:8489685-8489820:1:exon
so has part: feature:8490864-8490934:1:exon
so has part: feature:8494779-8494838:1:exon
so has part: feature:8500870-8500947:1:exon
so has part: feature:8502698-8502865:1:exon
so has part: feature:8503398-8503447:1:exon
so has part: feature:8504298-8504468:1:exon
so has part: feature:8506319-8506366:1:exon
so has part: feature:8506836-8506859:1:exon
so has part: feature:8519115-8519219:1:exon
so has part: feature:8521514-8521540:1:exon
so has part: feature:8523314-8523481:1:exon
so has part: feature:8537068-8537171:1:exon
so has part: feature:8539169-8539192:1:exon
so has part: feature:8540581-8540825:1:exon
so has part: feature:8542653-8542716:1:exon
so has part: feature:8545126-8545128:1:exon
so has part: feature:8545269-8545432:1:exon
so has part: feature:8549326-8549404:1:exon
so has part: feature:8550425-8550568:1:exon
so has part: feature:8558698-8558841:1:exon
so has part: feature:8559628-8559734:1:exon
so has part: feature:8563584-8563700:1:exon
so has part: feature:8568460-8568610:1:exon
so has part: feature:8572364-8572610:1:exon
so has part: feature:8574067-8574257:1:exon
so has part: feature:8575973-8576101:1:exon
so has part: feature:8590160-8590366:1:exon
so has part: feature:8591964-8592080:1:exon
so has part: feature:8600674-8603893:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8340063-8340203:1:exon

position:8340203:1
position: 8340203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8372513-8372992:1:exon

position:8372513:1
position: 8372513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8372992:1
position: 8372992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8431251-8431329:1:exon

position:8431251:1
position: 8431251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8431329:1
position: 8431329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8432672-8432775:1:exon

position:8432672:1
position: 8432672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8432775:1
position: 8432775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8434167-8434258:1:exon