Vulpes lagopus strain Blue_001 chromosome 16, ASM1834538v1, whole genome shotgun sequence.
type: Entry
definition: Vulpes lagopus strain Blue_001 chromosome 16, ASM1834538v1, whole genome shotgun sequence.
sequence version: NC_054839.1
sequence date: 2021-05-24
sequence: sequence
division: CON
label: NC_054839.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA730899
dblink: SAMN16815335
keyword: WGS
keyword: RefSeq
source: Vulpes lagopus (Arctic fox)
organism: Vulpes lagopus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes.
reference: 1
references: 33829635
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM031310.1.\nAssembly name: ASM1834538v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Hebei Normal University of\nScience and Technology on 2021/05/12. The original whole-genome\nshotgun project has the accession JADWOQ000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Hebei Normal University of Science and\n Technology\nAssembly Method :: WTDBG2 v. 2.5\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 121.0x\nSequencing Technology :: PacBio Sequel; Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Vulpes lagopus Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 61660527
topology: linear
so has quality: SO_0000987
location: 1..61660527
location: region:1-61660527:1
RO_0002162: 494514

NC_054839
type: RefSeq
SIO_000068: refseq

PRJNA730899
type: BioProject
SIO_000068: bioproject

SAMN16815335
type: BioSample
SIO_000068: biosample

1
title: Chromosome-level genome assembly of the Arctic fox (Vulpes lagopus) using PacBio sequencing and Hi-C technology
author: Peng, Y.
author: Li, H.
author: Liu, Z.
author: Zhang, C.
author: Li, K.
author: Gong, Y.
author: Geng, L.
author: Su, J.
author: Guan, X.
author: Liu, L.
author: Zhou, R.
author: Zhao, Z.
author: Guo, J.
author: Liang, Q.
author: Li, X.
journal: Mol Ecol Resour (2021) In press
pubmed: 33829635
comments: Publication Status: Available-Online prior to print

33829635
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61660527:1
position: 61660527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-61660527:1:source
so part of: sequence
organism: Vulpes lagopus
mol type: genomic DNA
strain: Blue_001
chromosome: 16
sex: female
tissue type: blood

494514
type: Taxonomy
SIO_000068: taxonomy

LOC121477171
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121477171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(89012..90533)
location: region:89012-90533:-1
so has part: feature:89012-90533:-1:exon
subclass of: SO_0000010

121477171
type: Gene
SIO_000068: ncbigene

position:89012:-1
position: 89012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90533:-1
position: 90533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89012-90533:-1:exon

LOC121477171
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LOC121477171
product: nascent polypeptide-associated complex subunit alpha, muscle-specific form
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_041731399.1
SIO_010081: LOC121477171
subclass of: SO_0000673
so part of: LOC121477171
location: complement(join(89012..90181,90510..90533))
location: region:89012-90533:-1
so has part: feature:90510-90533:-1:exon
so has part: feature:89012-90181:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90510-90533:-1:exon

position:90510:-1
position: 90510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:89012-90181:-1:exon

position:90181:-1
position: 90181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121477171
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LOC121477171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nascent polypeptide-associated complex subunit alpha, muscle-specific form
translation: MEQDDFTAGCTTILIIRFPDFSRAQTVTGIPTAPTPVPPVISTQGSGPVGDCLADFSPHVHTPAGPGTVFISESESHSTAKAAAGLPSTSRRTSEYLPFGYSEQSCWPLSELLGVKRQGRSCGAPAGAGTPLAPGGAHARLGVPSTPAAAPPQAPPKRPGPSPRFFPRTRAPPPRASRALEPPRALPAHAAGASRGRLPSGLPSSFQSSNNDESPRRPGQREPRPESQRERPSPAPRVPRCAPAPADAAGLASQPEAHPAGGLGAGRSSAHAPGGPLQTDPSRRDRPSPDDTPARPPRSSPARRGDVRTRAAPGEPGAQSRAAPRGLRRGGLPNGGSAQARAASARTCAPPRDERQGLMGSERGAPRPPAGPIRPRPPGAARPEARRRAEQSAPPRK
SIO_010081: LOC121477171
subclass of: SO_0000673
so part of: LOC121477171
location: complement(join(89012..90181,90510..90533))
location: region:89012-90533:-1
so has part: feature:90510-90533:-1:exon
so has part: feature:89012-90181:-1:exon

XP_041587333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90510-90533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89012-90181:-1:exon

CHAMP1
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: CHAMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 89171..103366
location: region:89171-103366:1
so has part: feature:89171-103366:1:exon
subclass of: SO_0000010

121476864
type: Gene
SIO_000068: ncbigene

position:89171:1
position: 89171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103366:1
position: 103366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89171-103366:1:exon

CHAMP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: CHAMP1
product: chromosome alignment maintaining phosphoprotein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041731001.1
SIO_010081: CHAMP1
subclass of: SO_0000673
so part of: CHAMP1
location: join(89171..89304,92960..93081,99799..103366)
location: region:89171-103366:1
so has part: feature:89171-89304:1:exon
so has part: feature:92960-93081:1:exon
so has part: feature:99799-103366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89171-89304:1:exon

position:89304:1
position: 89304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92960-93081:1:exon

position:92960:1
position: 92960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93081:1
position: 93081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:99799-103366:1:exon

position:99799:1
position: 99799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UPF3A
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: UPF3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(97498..147679)
location: region:97498-147679:-1
so has part: feature:97498-147679:-1:exon
subclass of: SO_0000010

121476865
type: Gene
SIO_000068: ncbigene

position:97498:-1
position: 97498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147679:-1
position: 147679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97498-147679:-1:exon

UPF3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: UPF3A
product: UPF3A regulator of nonsense mediated mRNA decay, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041731006.1
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(97498..97802,98702..98928,123804..123952,125531..125825,127858..128015,140898..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147678))
location: region:97498-147678:-1
so has part: feature:147339-147678:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140898-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125531-125825:-1:exon
so has part: feature:123804-123952:-1:exon
so has part: feature:98702-98928:-1:exon
so has part: feature:97498-97802:-1:exon

position:147678:-1
position: 147678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147678:-1:exon

position:147339:-1
position: 147339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

position:146702:-1
position: 146702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146808:-1
position: 146808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

position:145107:-1
position: 145107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145213:-1
position: 145213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

position:144138:-1
position: 144138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144236:-1
position: 144236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

position:143910:-1
position: 143910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144020:-1
position: 144020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

position:141147:-1
position: 141147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141202:-1
position: 141202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:140898-141056:-1:exon

position:140898:-1
position: 140898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141056:-1
position: 141056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

position:127858:-1
position: 127858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128015:-1
position: 128015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:125531-125825:-1:exon

position:125531:-1
position: 125531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125825:-1
position: 125825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:123804-123952:-1:exon

position:123804:-1
position: 123804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123952:-1
position: 123952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:98702-98928:-1:exon

position:98702:-1
position: 98702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98928:-1
position: 98928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:97498-97802:-1:exon

position:97802:-1
position: 97802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UPF3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: UPF3A
product: UPF3A regulator of nonsense mediated mRNA decay, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041731007.1
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(97498..97824,98702..98928,123804..123952,125531..125825,127858..128015,140898..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147678))
location: region:97498-147678:-1
so has part: feature:147339-147678:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140898-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125531-125825:-1:exon
so has part: feature:123804-123952:-1:exon
so has part: feature:98702-98928:-1:exon
so has part: feature:97498-97824:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140898-141056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125531-125825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123804-123952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98702-98928:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:97498-97824:-1:exon

position:97824:-1
position: 97824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UPF3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: UPF3A
product: UPF3A regulator of nonsense mediated mRNA decay, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041731005.1
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(98258..98928,123804..123952,125531..125825,127858..128015,140898..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147678))
location: region:98258-147678:-1
so has part: feature:147339-147678:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140898-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125531-125825:-1:exon
so has part: feature:123804-123952:-1:exon
so has part: feature:98258-98928:-1:exon

position:98258:-1
position: 98258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140898-141056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125531-125825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123804-123952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98258-98928:-1:exon

UPF3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: UPF3A
product: UPF3A regulator of nonsense mediated mRNA decay, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041731004.1
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(98796..98928,110945..112152,123804..123952,125531..125825,127858..128015,140910..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147679))
location: region:98796-147679:-1
so has part: feature:147339-147679:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140910-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125531-125825:-1:exon
so has part: feature:123804-123952:-1:exon
so has part: feature:110945-112152:-1:exon
so has part: feature:98796-98928:-1:exon

position:98796:-1
position: 98796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140910-141056:-1:exon

position:140910:-1
position: 140910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125531-125825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123804-123952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110945-112152:-1:exon

position:110945:-1
position: 110945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112152:-1
position: 112152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:98796-98928:-1:exon

UPF3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: UPF3A
product: UPF3A regulator of nonsense mediated mRNA decay, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041731002.1
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(98796..98928,110945..112152,123804..123952,125531..125825,127858..128015,140898..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147678))
location: region:98796-147678:-1
so has part: feature:147339-147678:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140898-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125531-125825:-1:exon
so has part: feature:123804-123952:-1:exon
so has part: feature:110945-112152:-1:exon
so has part: feature:98796-98928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140898-141056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125531-125825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123804-123952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110945-112152:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:98796-98928:-1:exon

UPF3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: UPF3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 3A isoform X3
translation: MRSEEEGVGGPRAAVPGRGPSGREKQSAGEVRFRRESPWREAEAHPASSSGGGAGTGKPREEKTVLSKVVVRRLPPSLTEGQLEEQLRPLPAHDYFAFFAADVSLYPHLYSRAYINFRNPEDILLFRDRFDGYIFTDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFLETYCVEEEKPNANPETLLGDIEAKTRELIARRTTPLLEYIRNRKLEKQRIREEKQEERRRRELEKKRLREEEKRKKREEERCKRKEADREKRAAEREVRIKLLKKPEKGQEPTEKPKERGEEVDVGDGKQEMSLSYAVLKPMPLESSLEKPRKKSQNDSDKEQREMERRLQAKEPETQRCHMDGSMHRVHCEFNRFARRNEEEPRWGKGVPPDRGKKGNQDSSIPVEAAEWPGREHKSEGGLASSMECPGNKDLPALQLYQPEAHIRAQESGGGISVEGCDGSRGEAEDLALAGSQKSEEAGEEKMLQEKEDQLLRLHGEKWSFSDSRNQRRPSFCVST
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(98814..98928,123804..123952,125531..125825,127858..128015,140898..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147542))
location: region:98814-147542:-1
so has part: feature:147339-147542:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140898-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125531-125825:-1:exon
so has part: feature:123804-123952:-1:exon
so has part: feature:98814-98928:-1:exon

XP_041586939.1
type: Protein
SIO_000068: ncbiprotein

position:98814:-1
position: 98814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147542:-1
position: 147542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140898-141056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125531-125825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123804-123952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98814-98928:-1:exon

UPF3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: UPF3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 3A isoform X3
translation: MRSEEEGVGGPRAAVPGRGPSGREKQSAGEVRFRRESPWREAEAHPASSSGGGAGTGKPREEKTVLSKVVVRRLPPSLTEGQLEEQLRPLPAHDYFAFFAADVSLYPHLYSRAYINFRNPEDILLFRDRFDGYIFTDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFLETYCVEEEKPNANPETLLGDIEAKTRELIARRTTPLLEYIRNRKLEKQRIREEKQEERRRRELEKKRLREEEKRKKREEERCKRKEADREKRAAEREVRIKLLKKPEKGQEPTEKPKERGEEVDVGDGKQEMSLSYAVLKPMPLESSLEKPRKKSQNDSDKEQREMERRLQAKEPETQRCHMDGSMHRVHCEFNRFARRNEEEPRWGKGVPPDRGKKGNQDSSIPVEAAEWPGREHKSEGGLASSMECPGNKDLPALQLYQPEAHIRAQESGGGISVEGCDGSRGEAEDLALAGSQKSEEAGEEKMLQEKEDQLLRLHGEKWSFSDSRNQRRPSFCVST
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(98814..98928,123804..123952,125531..125825,127858..128015,140898..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147542))
location: region:98814-147542:-1
so has part: feature:147339-147542:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140898-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125531-125825:-1:exon
so has part: feature:123804-123952:-1:exon
so has part: feature:98814-98928:-1:exon

XP_041586940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140898-141056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125531-125825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123804-123952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98814-98928:-1:exon

UPF3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: UPF3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 3A isoform X3
translation: MRSEEEGVGGPRAAVPGRGPSGREKQSAGEVRFRRESPWREAEAHPASSSGGGAGTGKPREEKTVLSKVVVRRLPPSLTEGQLEEQLRPLPAHDYFAFFAADVSLYPHLYSRAYINFRNPEDILLFRDRFDGYIFTDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFLETYCVEEEKPNANPETLLGDIEAKTRELIARRTTPLLEYIRNRKLEKQRIREEKQEERRRRELEKKRLREEEKRKKREEERCKRKEADREKRAAEREVRIKLLKKPEKGQEPTEKPKERGEEVDVGDGKQEMSLSYAVLKPMPLESSLEKPRKKSQNDSDKEQREMERRLQAKEPETQRCHMDGSMHRVHCEFNRFARRNEEEPRWGKGVPPDRGKKGNQDSSIPVEAAEWPGREHKSEGGLASSMECPGNKDLPALQLYQPEAHIRAQESGGGISVEGCDGSRGEAEDLALAGSQKSEEAGEEKMLQEKEDQLLRLHGEKWSFSDSRNQRRPSFCVST
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(98814..98928,123804..123952,125531..125825,127858..128015,140898..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147542))
location: region:98814-147542:-1
so has part: feature:147339-147542:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140898-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125531-125825:-1:exon
so has part: feature:123804-123952:-1:exon
so has part: feature:98814-98928:-1:exon

XP_041586941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140898-141056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125531-125825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123804-123952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98814-98928:-1:exon

UPF3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: UPF3A
product: UPF3A regulator of nonsense mediated mRNA decay, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041731003.1
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(98878..98928,108372..108453,110945..112152,123804..123952,125531..125825,127858..128015,140898..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147678))
location: region:98878-147678:-1
so has part: feature:147339-147678:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140898-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125531-125825:-1:exon
so has part: feature:123804-123952:-1:exon
so has part: feature:110945-112152:-1:exon
so has part: feature:108372-108453:-1:exon
so has part: feature:98878-98928:-1:exon

position:98878:-1
position: 98878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140898-141056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125531-125825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123804-123952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110945-112152:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:108372-108453:-1:exon

position:108372:-1
position: 108372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108453:-1
position: 108453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:98878-98928:-1:exon

UPF3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: UPF3A
product: UPF3A regulator of nonsense mediated mRNA decay, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041731008.1
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(98903..98928,110945..111095,112088..112152,123804..123952,125531..125825,127858..128015,140898..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147678))
location: region:98903-147678:-1
so has part: feature:147339-147678:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140898-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125531-125825:-1:exon
so has part: feature:123804-123952:-1:exon
so has part: feature:112088-112152:-1:exon
so has part: feature:110945-111095:-1:exon
so has part: feature:98903-98928:-1:exon

position:98903:-1
position: 98903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140898-141056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125531-125825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123804-123952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:112088-112152:-1:exon

position:112088:-1
position: 112088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:110945-111095:-1:exon

position:111095:-1
position: 111095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:98903-98928:-1:exon

CHAMP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: CHAMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromosome alignment-maintaining phosphoprotein 1
translation: MEVFQEVRKPSSRLECDHCSFRGTDYENVQIHMGTIHPEFCDEMDAGGLGKMIFYQKSAKLFHCHKCFFTSKMYSNVYYHITSKHAGPEKWNEKPKNPVSKETDPGKSPPLPEHQKMSSNSAELPKPIPALSIETQKLGPILSPESPKPTPLTYLEPQKPGPVVSPEPQTPSLPSPEPPKSASVSSPELPKPVPIVSESQKPVPVPSPEPQKLGPISPEPVKATLVNPKPQKHSHFTETLGPPSGSSPESPVLAASPEPWGPSPTASPESRKPARTISPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRSWKSSPSASSGPWKPAKPAPSVSPGPWKPIPSISPGPWKPTSSVSPASWKSSSVSPGSWKSPPASPEAWKSGPPELRKTAPTLSPEHWKTVPSVSPELRKAGPPLSPELRKPGPPLSPEIRSPAGSPELRKPSGSPELWKLSSDQRKTSPASLDFSESQKSSRGGSPDLWKSSFFIEPQKPVFPETRKPSGPCESPKAGSDIWKPVLSLDTEPRKPALFSEPTKTAPPASPEPRKRALFPEPRKHALFPELPKSAIFSESQKAVELGDELQTNAIDDQKCDILVQEELLATPKKLLEDTLFPSSKKLKKDNQESSDAELSSSEYIKADLDVIDSKGQESSSDQEQVDVESIDFSKENKMDMTNPEQSKNVLQFTEEKEAFISEEEIAKYMKRGKGKYYCKICCCRAMKKGAVLHHLVNKHNVHSPYKCTICGKAFLLESLLKNHVAAHGQSLLKCPRCNFESNFPRGFKKHLTHCQSRHNEEANKKLMEALEQPLEEQQI
SIO_010081: CHAMP1
subclass of: SO_0000673
so part of: CHAMP1
location: 99853..102327
location: region:99853-102327:1
so has part: feature:99853-102327:1:exon

XP_041586935.1
type: Protein
SIO_000068: ncbiprotein

position:99853:1
position: 99853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102327:1
position: 102327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99853-102327:1:exon

UPF3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: UPF3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 3A isoform X4
translation: MRSEEEGVGGPRAAVPGRGPSGREKQSAGEVRFRRESPWREAEAHPASSSGGGAGTGKPREEKTVLSKVVVRRLPPSLTEGQLEEQLRPLPAHDYFAFFAADVSLYPHLYSRAYINFRNPEDILLFRDRFDGYIFTDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFLETYCVEEEKPNANPETLLGDIEAKTRELIARRTTPLLEYIRNRKLEKQRIREEKQEERRRRELEKKRLREEEKRKKREEERCKRKEADREKRAAEREVRIKLLKKPEKGQEPTEKPKERGEEVDVGDGKQEMSLSYAVLKPMPLESSLEKPRKKSQNDSDKEQREMERRLQAKEPETQRCHMDGSMHRVHCEFNRFARRNEEEPRWGKGVPPDRGKKGNQDSSIPVEAAEWPGREHKSEGGLASSMECPGNKDLPALQLYQPEAHIRAQESGGGISVEGCDGSRGEAEDLALAGSQKSEEAGHLLQVGKDPQARQLARLRVCQDKLSREADTCILAQ
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(111052..111095,112088..112152,123804..123952,125531..125825,127858..128015,140898..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147542))
location: region:111052-147542:-1
so has part: feature:147339-147542:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140898-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125531-125825:-1:exon
so has part: feature:123804-123952:-1:exon
so has part: feature:112088-112152:-1:exon
so has part: feature:111052-111095:-1:exon

XP_041586942.1
type: Protein
SIO_000068: ncbiprotein

position:111052:-1
position: 111052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140898-141056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125531-125825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123804-123952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:112088-112152:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:111052-111095:-1:exon

UPF3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: UPF3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 3A isoform X2
translation: MRSEEEGVGGPRAAVPGRGPSGREKQSAGEVRFRRESPWREAEAHPASSSGGGAGTGKPREEKTVLSKVVVRRLPPSLTEGQLEEQLRPLPAHDYFAFFAADVSLYPHLYSRAYINFRNPEDILLFRDRFDGYIFTDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFLETYCVEEEKPNANPETLLGDIEAKTRELIARRTTPLLEYIRNRKLEKQRIREEKQEERRRRELEKKRLREEEKRKKREEERCKRKEADREKRAAERELLKKPEKGQEPTEKPKERGEEVDVGDGKQEMSLSYAVLKPMPLESSLEKPRKKSQNDSDKEQREMERRLQAKEPETQRCHMDGSMHRVHCEFNRFARRNEEEPRWGKGVPPDRGKKGNQDSSIPVEAAEWPGREHKSEGGLASSMECPGNKDLPALQLYQPEAHIRAQESGGGISVEGCDGSRGEAEDLALAGSQKSEEAGHLLQVGKDPQARQLARLRVCQGMEPARLQLTDALCATVELTVSSRGHRGPAWVSAVRGGLGMALL
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(111954..112152,123804..123952,125531..125825,127858..128015,140910..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147542))
location: region:111954-147542:-1
so has part: feature:147339-147542:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140910-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125531-125825:-1:exon
so has part: feature:123804-123952:-1:exon
so has part: feature:111954-112152:-1:exon

XP_041586938.1
type: Protein
SIO_000068: ncbiprotein

position:111954:-1
position: 111954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140910-141056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125531-125825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123804-123952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:111954-112152:-1:exon

UPF3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: UPF3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 3A isoform X1
translation: MRSEEEGVGGPRAAVPGRGPSGREKQSAGEVRFRRESPWREAEAHPASSSGGGAGTGKPREEKTVLSKVVVRRLPPSLTEGQLEEQLRPLPAHDYFAFFAADVSLYPHLYSRAYINFRNPEDILLFRDRFDGYIFTDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFLETYCVEEEKPNANPETLLGDIEAKTRELIARRTTPLLEYIRNRKLEKQRIREEKQEERRRRELEKKRLREEEKRKKREEERCKRKEADREKRAAEREVRIKLLKKPEKGQEPTEKPKERGEEVDVGDGKQEMSLSYAVLKPMPLESSLEKPRKKSQNDSDKEQREMERRLQAKEPETQRCHMDGSMHRVHCEFNRFARRNEEEPRWGKGVPPDRGKKGNQDSSIPVEAAEWPGREHKSEGGLASSMECPGNKDLPALQLYQPEAHIRAQESGGGISVEGCDGSRGEAEDLALAGSQKSEEAGHLLQVGKDPQARQLARLRVCQGMEPARLQLTDALCATVELTVSSRGHRGPAWVSAVRGGLGMALL
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(111954..112152,123804..123952,125531..125825,127858..128015,140898..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147542))
location: region:111954-147542:-1
so has part: feature:147339-147542:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140898-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125531-125825:-1:exon
so has part: feature:123804-123952:-1:exon
so has part: feature:111954-112152:-1:exon

XP_041586936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140898-141056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125531-125825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123804-123952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:111954-112152:-1:exon

UPF3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: UPF3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 3A isoform X1
translation: MRSEEEGVGGPRAAVPGRGPSGREKQSAGEVRFRRESPWREAEAHPASSSGGGAGTGKPREEKTVLSKVVVRRLPPSLTEGQLEEQLRPLPAHDYFAFFAADVSLYPHLYSRAYINFRNPEDILLFRDRFDGYIFTDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFLETYCVEEEKPNANPETLLGDIEAKTRELIARRTTPLLEYIRNRKLEKQRIREEKQEERRRRELEKKRLREEEKRKKREEERCKRKEADREKRAAEREVRIKLLKKPEKGQEPTEKPKERGEEVDVGDGKQEMSLSYAVLKPMPLESSLEKPRKKSQNDSDKEQREMERRLQAKEPETQRCHMDGSMHRVHCEFNRFARRNEEEPRWGKGVPPDRGKKGNQDSSIPVEAAEWPGREHKSEGGLASSMECPGNKDLPALQLYQPEAHIRAQESGGGISVEGCDGSRGEAEDLALAGSQKSEEAGHLLQVGKDPQARQLARLRVCQGMEPARLQLTDALCATVELTVSSRGHRGPAWVSAVRGGLGMALL
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(111954..112152,123804..123952,125531..125825,127858..128015,140898..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147542))
location: region:111954-147542:-1
so has part: feature:147339-147542:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140898-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125531-125825:-1:exon
so has part: feature:123804-123952:-1:exon
so has part: feature:111954-112152:-1:exon

XP_041586937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140898-141056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125531-125825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123804-123952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:111954-112152:-1:exon

UPF3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: UPF3A
product: UPF3A regulator of nonsense mediated mRNA decay, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041731009.1
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(114809..116439,123804..123952,125531..125825,127858..128015,140898..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147677))
location: region:114809-147677:-1
so has part: feature:147339-147677:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140898-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125531-125825:-1:exon
so has part: feature:123804-123952:-1:exon
so has part: feature:114809-116439:-1:exon

position:114809:-1
position: 114809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147677:-1
position: 147677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147677:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140898-141056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125531-125825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123804-123952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:114809-116439:-1:exon

position:116439:-1
position: 116439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UPF3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: UPF3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 3A isoform X5
translation: MRSEEEGVGGPRAAVPGRGPSGREKQSAGEVRFRRESPWREAEAHPASSSGGGAGTGKPREEKTVLSKVVVRRLPPSLTEGQLEEQLRPLPAHDYFAFFAADVSLYPHLYSRAYINFRNPEDILLFRDRFDGYIFTDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFLETYCVEEEKPNANPETLLGDIEAKTRELIARRTTPLLEYIRNRKLEKQRIREEKQEERRRRELEKKRLREEEKRKKREEERCKRKEADREKRAAEREVRIKLLKKPEKGQEPTEKPKERGEEVDVGDGKQEMSLSYAVLKPMPLESSLEKPRKKSQNDSDKEQREMERRLQAKEPETQRCHMDGSMHRVHCEFNRFARRNEEEPRWGKGVPPDRGKKGNQDSSIPVEAAEWPGREHKSEGGLASSMECPGNKDLPALQLYQPEAHIRAQESGGGISVEGCDGSRGEAEDLALAGSQKSEEAGFQQLPSVIQIKKREDL
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(116388..116439,123804..123952,125531..125825,127858..128015,140898..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147542))
location: region:116388-147542:-1
so has part: feature:147339-147542:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140898-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125531-125825:-1:exon
so has part: feature:123804-123952:-1:exon
so has part: feature:116388-116439:-1:exon

XP_041586943.1
type: Protein
SIO_000068: ncbiprotein

position:116388:-1
position: 116388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140898-141056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125531-125825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123804-123952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116388-116439:-1:exon

UPF3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: UPF3A
product: UPF3A regulator of nonsense mediated mRNA decay, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041731010.1
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(116469..122378,123804..123952,125531..125825,127858..128015,140898..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147677))
location: region:116469-147677:-1
so has part: feature:147339-147677:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140898-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125531-125825:-1:exon
so has part: feature:123804-123952:-1:exon
so has part: feature:116469-122378:-1:exon

position:116469:-1
position: 116469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147677:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140898-141056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125531-125825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123804-123952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116469-122378:-1:exon

position:122378:-1
position: 122378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UPF3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: UPF3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 3A isoform X6
translation: MRSEEEGVGGPRAAVPGRGPSGREKQSAGEVRFRRESPWREAEAHPASSSGGGAGTGKPREEKTVLSKVVVRRLPPSLTEGQLEEQLRPLPAHDYFAFFAADVSLYPHLYSRAYINFRNPEDILLFRDRFDGYIFTDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFLETYCVEEEKPNANPETLLGDIEAKTRELIARRTTPLLEYIRNRKLEKQRIREEKQEERRRRELEKKRLREEEKRKKREEERCKRKEADREKRAAEREVRIKLLKKPEKGQEPTEKPKERGEEVDVGDGKQEMSLSYAVLKPMPLESSLEKPRKKSQNDSDKEQREMERRLQAKEPETQRCHMDGSMHRVHCEFNRFARRNEEEPRWGKGVPPDRGKKGNQDSSIPVEAAEWPGREHKSEGGLASSMECPGNKDLPALQLYQPEAHIRAQESGGGISVEGCDGSRGEAEDLALAGSQKSEEAGSAAQNGLKTGT
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(122342..122378,123804..123952,125531..125825,127858..128015,140898..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147542))
location: region:122342-147542:-1
so has part: feature:147339-147542:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140898-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125531-125825:-1:exon
so has part: feature:123804-123952:-1:exon
so has part: feature:122342-122378:-1:exon

XP_041586944.1
type: Protein
SIO_000068: ncbiprotein

position:122342:-1
position: 122342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140898-141056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125531-125825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123804-123952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:122342-122378:-1:exon

UPF3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: UPF3A
product: UPF3A regulator of nonsense mediated mRNA decay, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041731011.1
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(123828..123952,125716..125825,127858..128015,140898..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147679))
location: region:123828-147679:-1
so has part: feature:147339-147679:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140898-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125716-125825:-1:exon
so has part: feature:123828-123952:-1:exon

position:123828:-1
position: 123828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140898-141056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125716-125825:-1:exon

position:125716:-1
position: 125716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:123828-123952:-1:exon

UPF3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: UPF3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 3A isoform X7
translation: MRSEEEGVGGPRAAVPGRGPSGREKQSAGEVRFRRESPWREAEAHPASSSGGGAGTGKPREEKTVLSKVVVRRLPPSLTEGQLEEQLRPLPAHDYFAFFAADVSLYPHLYSRAYINFRNPEDILLFRDRFDGYIFTDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFLETYCVEEEKPNANPETLLGDIEAKTRELIARRTTPLLEYIRNRKLEKQRIREEKQEERRRRELEKKRLREEEKRKKREEERCKRKEADREKRAAEREVRIKLLKKPEKGQEPTEKPKERGEEVDVGDGKQEMSLSYAVLKPMPLESSLEKPRKKSQNDSDKEQREMERRLQAKEPETQRCHMDGSMHRVH
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(123951..123952,125716..125825,127858..128015,140898..141056,141147..141202,143910..144020,144138..144236,145107..145213,146702..146808,147339..147542))
location: region:123951-147542:-1
so has part: feature:147339-147542:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:141147-141202:-1:exon
so has part: feature:140898-141056:-1:exon
so has part: feature:127858-128015:-1:exon
so has part: feature:125716-125825:-1:exon
so has part: feature:123951-123952:-1:exon

XP_041586945.1
type: Protein
SIO_000068: ncbiprotein

position:123951:-1
position: 123951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141147-141202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140898-141056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127858-128015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125716-125825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123951-123952:-1:exon

UPF3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: UPF3A
product: UPF3A regulator of nonsense mediated mRNA decay, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041731012.1
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(125690..125825,140898..141089,143910..144020,144138..144236,145107..145213,146702..146808,147339..147679))
location: region:125690-147679:-1
so has part: feature:147339-147679:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:140898-141089:-1:exon
so has part: feature:125690-125825:-1:exon

position:125690:-1
position: 125690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:140898-141089:-1:exon

position:141089:-1
position: 141089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:125690-125825:-1:exon

UPF3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: UPF3A
product: UPF3A regulator of nonsense mediated mRNA decay, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041731014.1
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(127877..128015,140910..141089,143910..144020,144138..144236,145107..145213,146702..146808,147339..147679))
location: region:127877-147679:-1
so has part: feature:147339-147679:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:140910-141089:-1:exon
so has part: feature:127877-128015:-1:exon

position:127877:-1
position: 127877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:140910-141089:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127877-128015:-1:exon

UPF3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: UPF3A
product: UPF3A regulator of nonsense mediated mRNA decay, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041731013.1
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(127879..128015,140898..141089,143910..144020,144138..144236,145107..145213,146702..146808,147339..147679))
location: region:127879-147679:-1
so has part: feature:147339-147679:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:140898-141089:-1:exon
so has part: feature:127879-128015:-1:exon

position:127879:-1
position: 127879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:140898-141089:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127879-128015:-1:exon

LOC121476867
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121476867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 132208..134164
location: region:132208-134164:1
so has part: feature:132208-134164:1:exon
subclass of: SO_0000010

121476867
type: Gene
SIO_000068: ncbigene

position:132208:1
position: 132208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134164:1
position: 134164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132208-134164:1:exon

LOC121476867
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LOC121476867
product: DET1- and DDB1-associated protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041731015.1
SIO_010081: LOC121476867
subclass of: SO_0000673
so part of: LOC121476867
location: 132208..134164
location: region:132208-134164:1
so has part: feature:132208-134164:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132208-134164:1:exon

LOC121476867
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LOC121476867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DET1- and DDB1-associated protein 1-like
translation: MADFLKGLPIYNKSNFSRFHADSVCKASNRRPSVYLPTREYPSEQIIVTEKTNILLHYLHKQWDKKNATKKRDQEQVDLEGESSAPLRKVAWTDSPDMHEDT
SIO_010081: LOC121476867
subclass of: SO_0000673
so part of: LOC121476867
location: 132409..132717
location: region:132409-132717:1
so has part: feature:132409-132717:1:exon

XP_041586949.1
type: Protein
SIO_000068: ncbiprotein

position:132409:1
position: 132409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132717:1
position: 132717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132409-132717:1:exon

UPF3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: UPF3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 3A isoform X8
translation: MRSEEEGVGGPRAAVPGRGPSGREKQSAGEVRFRRESPWREAEAHPASSSGGGAGTGKPREEKTVLSKVVVRRLPPSLTEGQLEEQLRPLPAHDYFAFFAADVSLYPHLYSRAYINFRNPEDILLFRDRFDGYIFTDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFLETYCVEEEKPNANPETLLGDIEAKTRELIDHLYTCFPTSLEDSRREARRAKEEGTGEEAFTGRRKEEEERRGEV
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(140953..141089,143910..144020,144138..144236,145107..145213,146702..146808,147339..147542))
location: region:140953-147542:-1
so has part: feature:147339-147542:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:140953-141089:-1:exon

XP_041586946.1
type: Protein
SIO_000068: ncbiprotein

position:140953:-1
position: 140953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:140953-141089:-1:exon

UPF3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: UPF3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 3A isoform X8
translation: MRSEEEGVGGPRAAVPGRGPSGREKQSAGEVRFRRESPWREAEAHPASSSGGGAGTGKPREEKTVLSKVVVRRLPPSLTEGQLEEQLRPLPAHDYFAFFAADVSLYPHLYSRAYINFRNPEDILLFRDRFDGYIFTDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFLETYCVEEEKPNANPETLLGDIEAKTRELIDHLYTCFPTSLEDSRREARRAKEEGTGEEAFTGRRKEEEERRGEV
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(140953..141089,143910..144020,144138..144236,145107..145213,146702..146808,147339..147542))
location: region:140953-147542:-1
so has part: feature:147339-147542:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:140953-141089:-1:exon

XP_041586947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:140953-141089:-1:exon

UPF3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: UPF3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 3A isoform X8
translation: MRSEEEGVGGPRAAVPGRGPSGREKQSAGEVRFRRESPWREAEAHPASSSGGGAGTGKPREEKTVLSKVVVRRLPPSLTEGQLEEQLRPLPAHDYFAFFAADVSLYPHLYSRAYINFRNPEDILLFRDRFDGYIFTDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFLETYCVEEEKPNANPETLLGDIEAKTRELIDHLYTCFPTSLEDSRREARRAKEEGTGEEAFTGRRKEEEERRGEV
SIO_010081: UPF3A
subclass of: SO_0000673
so part of: UPF3A
location: complement(join(140953..141089,143910..144020,144138..144236,145107..145213,146702..146808,147339..147542))
location: region:140953-147542:-1
so has part: feature:147339-147542:-1:exon
so has part: feature:146702-146808:-1:exon
so has part: feature:145107-145213:-1:exon
so has part: feature:144138-144236:-1:exon
so has part: feature:143910-144020:-1:exon
so has part: feature:140953-141089:-1:exon

XP_041586948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147339-147542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146702-146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145107-145213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144138-144236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143910-144020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:140953-141089:-1:exon

CDC16
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: CDC16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(150449..186755)
location: region:150449-186755:-1
so has part: feature:150449-186755:-1:exon
subclass of: SO_0000010

121477028
type: Gene
SIO_000068: ncbigene

position:150449:-1
position: 150449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186755:-1
position: 186755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150449-186755:-1:exon

CDC16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: CDC16
product: cell division cycle 16, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041731211.1
SIO_010081: CDC16
subclass of: SO_0000673
so part of: CDC16
location: complement(join(150449..151093,157219..157689,159780..159870,161374..161509,162536..162597,164963..165026,166566..166718,176198..176271,177159..177208,178554..178633,179487..179620,180006..180097,181060..181219,182895..183035,183393..183431,184233..184330,184433..184487,186631..186755))
location: region:150449-186755:-1
so has part: feature:186631-186755:-1:exon
so has part: feature:184433-184487:-1:exon
so has part: feature:184233-184330:-1:exon
so has part: feature:183393-183431:-1:exon
so has part: feature:182895-183035:-1:exon
so has part: feature:181060-181219:-1:exon
so has part: feature:180006-180097:-1:exon
so has part: feature:179487-179620:-1:exon
so has part: feature:178554-178633:-1:exon
so has part: feature:177159-177208:-1:exon
so has part: feature:176198-176271:-1:exon
so has part: feature:166566-166718:-1:exon
so has part: feature:164963-165026:-1:exon
so has part: feature:162536-162597:-1:exon
so has part: feature:161374-161509:-1:exon
so has part: feature:159780-159870:-1:exon
so has part: feature:157219-157689:-1:exon
so has part: feature:150449-151093:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186631-186755:-1:exon

position:186631:-1
position: 186631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:184433-184487:-1:exon

position:184433:-1
position: 184433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184487:-1
position: 184487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:184233-184330:-1:exon

position:184233:-1
position: 184233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184330:-1
position: 184330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:183393-183431:-1:exon

position:183393:-1
position: 183393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183431:-1
position: 183431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:182895-183035:-1:exon

position:182895:-1
position: 182895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183035:-1
position: 183035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:181060-181219:-1:exon

position:181060:-1
position: 181060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181219:-1
position: 181219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:180006-180097:-1:exon

position:180006:-1
position: 180006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180097:-1
position: 180097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:179487-179620:-1:exon

position:179487:-1
position: 179487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179620:-1
position: 179620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:178554-178633:-1:exon

position:178554:-1
position: 178554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178633:-1
position: 178633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:177159-177208:-1:exon

position:177159:-1
position: 177159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177208:-1
position: 177208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:176198-176271:-1:exon

position:176198:-1
position: 176198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176271:-1
position: 176271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:166566-166718:-1:exon

position:166566:-1
position: 166566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166718:-1
position: 166718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:164963-165026:-1:exon

position:164963:-1
position: 164963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165026:-1
position: 165026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:162536-162597:-1:exon

position:162536:-1
position: 162536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162597:-1
position: 162597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:161374-161509:-1:exon

position:161374:-1
position: 161374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161509:-1
position: 161509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:159780-159870:-1:exon

position:159780:-1
position: 159780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159870:-1
position: 159870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:157219-157689:-1:exon

position:157219:-1
position: 157219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157689:-1
position: 157689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:150449-151093:-1:exon

position:151093:-1
position: 151093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDC16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: CDC16
product: cell division cycle 16, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041731210.1
SIO_010081: CDC16
subclass of: SO_0000673
so part of: CDC16
location: complement(join(150455..151093,157219..157689,159780..159870,161374..161509,162536..162597,164963..165026,166566..166718,173855..173980,176198..176271,177159..177208,178554..178633,179487..179620,180006..180097,181060..181219,182895..183035,183393..183431,184233..184330,184433..184487,186631..186755))
location: region:150455-186755:-1
so has part: feature:186631-186755:-1:exon
so has part: feature:184433-184487:-1:exon
so has part: feature:184233-184330:-1:exon
so has part: feature:183393-183431:-1:exon
so has part: feature:182895-183035:-1:exon
so has part: feature:181060-181219:-1:exon
so has part: feature:180006-180097:-1:exon
so has part: feature:179487-179620:-1:exon
so has part: feature:178554-178633:-1:exon
so has part: feature:177159-177208:-1:exon
so has part: feature:176198-176271:-1:exon
so has part: feature:173855-173980:-1:exon
so has part: feature:166566-166718:-1:exon
so has part: feature:164963-165026:-1:exon
so has part: feature:162536-162597:-1:exon
so has part: feature:161374-161509:-1:exon
so has part: feature:159780-159870:-1:exon
so has part: feature:157219-157689:-1:exon
so has part: feature:150455-151093:-1:exon

position:150455:-1
position: 150455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186631-186755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184433-184487:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:184233-184330:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:183393-183431:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:182895-183035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181060-181219:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:180006-180097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:179487-179620:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:178554-178633:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:177159-177208:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:176198-176271:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:173855-173980:-1:exon

position:173855:-1
position: 173855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173980:-1
position: 173980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:166566-166718:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:164963-165026:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:162536-162597:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:161374-161509:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:159780-159870:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:157219-157689:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:150455-151093:-1:exon

CDC16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: CDC16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division cycle protein 16 homolog isoform X2
translation: MNLERLRKRVRQYLDQQQYQSALFWADKVASLSHEEPQDIYWLAQCLYLTAQYHRAAHALRSRKLDKLYEACRYLAARCHYAAKEHQQALDILDMEEPINKRLFEKCLKDESGLKDPSSDWEMSQSSIKSSICLLRGKIYDALDNRALATYSYKEALKLDAYCFEAFDLLTSHHMLTAQEEKELLESLPLSKLCTEEQELLRFLFENKLKKYNKPSETVLPESVDGLQENLDVVVSLAERHYYNCDFKMCYKLTSVVMEKDPFHANCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLRCHLPMLYIGLEYGLTNNSKLAERFFGQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEAYIGADIKDKLKCYDFDVHTMKTLKNIISPPWDFREFEVEKQTAEETGLVPLETSRKTPDPRPSLEETFEIEMNESDMMLETSMSDHST
SIO_010081: CDC16
subclass of: SO_0000673
so part of: CDC16
location: complement(join(157430..157689,159780..159870,161374..161509,162536..162597,164963..165026,166566..166718,176198..176271,177159..177208,178554..178633,179487..179620,180006..180097,181060..181219,182895..183035,183393..183431,184233..184330,184433..184487,186631..186678))
location: region:157430-186678:-1
so has part: feature:186631-186678:-1:exon
so has part: feature:184433-184487:-1:exon
so has part: feature:184233-184330:-1:exon
so has part: feature:183393-183431:-1:exon
so has part: feature:182895-183035:-1:exon
so has part: feature:181060-181219:-1:exon
so has part: feature:180006-180097:-1:exon
so has part: feature:179487-179620:-1:exon
so has part: feature:178554-178633:-1:exon
so has part: feature:177159-177208:-1:exon
so has part: feature:176198-176271:-1:exon
so has part: feature:166566-166718:-1:exon
so has part: feature:164963-165026:-1:exon
so has part: feature:162536-162597:-1:exon
so has part: feature:161374-161509:-1:exon
so has part: feature:159780-159870:-1:exon
so has part: feature:157430-157689:-1:exon

XP_041587145.1
type: Protein
SIO_000068: ncbiprotein

position:157430:-1
position: 157430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186678:-1
position: 186678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186631-186678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184433-184487:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:184233-184330:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:183393-183431:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:182895-183035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181060-181219:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:180006-180097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:179487-179620:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:178554-178633:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:177159-177208:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:176198-176271:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:166566-166718:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:164963-165026:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:162536-162597:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:161374-161509:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:159780-159870:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:157430-157689:-1:exon

CDC16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: CDC16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division cycle protein 16 homolog isoform X1
translation: MNLERLRKRVRQYLDQQQYQSALFWADKVASLSHEEPQDIYWLAQCLYLTAQYHRAAHALRSRKLDKLYEACRYLAARCHYAAKEHQQALDILDMEEPINKRLFEKCLKDESGLKDPSSDWEMSQSSIKSSICLLRGKIYDALDNRALATYSYKEALKLDAYCFEAFDLLTSHHMLTAQEEKELLESLPLSKLCTEEQELLRFLFENKLKKYNKPSETVLPESVDGLQENLDVVVSLAERHYYNCDFKMCYKLTSVVMEKDPFHANCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWVAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFGQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEAYIGADIKDKLKCYDFDVHTMKTLKNIISPPWDFREFEVEKQTAEETGLVPLETSRKTPDPRPSLEETFEIEMNESDMMLETSMSDHST
SIO_010081: CDC16
subclass of: SO_0000673
so part of: CDC16
location: complement(join(157430..157689,159780..159870,161374..161509,162536..162597,164963..165026,166566..166718,173855..173980,176198..176271,177159..177208,178554..178633,179487..179620,180006..180097,181060..181219,182895..183035,183393..183431,184233..184330,184433..184487,186631..186678))
location: region:157430-186678:-1
so has part: feature:186631-186678:-1:exon
so has part: feature:184433-184487:-1:exon
so has part: feature:184233-184330:-1:exon
so has part: feature:183393-183431:-1:exon
so has part: feature:182895-183035:-1:exon
so has part: feature:181060-181219:-1:exon
so has part: feature:180006-180097:-1:exon
so has part: feature:179487-179620:-1:exon
so has part: feature:178554-178633:-1:exon
so has part: feature:177159-177208:-1:exon
so has part: feature:176198-176271:-1:exon
so has part: feature:173855-173980:-1:exon
so has part: feature:166566-166718:-1:exon
so has part: feature:164963-165026:-1:exon
so has part: feature:162536-162597:-1:exon
so has part: feature:161374-161509:-1:exon
so has part: feature:159780-159870:-1:exon
so has part: feature:157430-157689:-1:exon

XP_041587144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186631-186678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184433-184487:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:184233-184330:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:183393-183431:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:182895-183035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181060-181219:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:180006-180097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:179487-179620:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:178554-178633:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:177159-177208:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:176198-176271:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:173855-173980:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:166566-166718:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:164963-165026:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:162536-162597:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:161374-161509:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:159780-159870:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:157430-157689:-1:exon

LOC121476860
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121476860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 218222..228445
location: region:218222-228445:1
so has part: feature:218222-228445:1:exon
subclass of: SO_0000011

121476860
type: Gene
SIO_000068: ncbigene

position:218222:1
position: 218222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228445:1
position: 228445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218222-228445:1:exon

LOC121476860
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: lncRNA
gene: LOC121476860
product: uncharacterized LOC121476860
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005984051.1
SIO_010081: LOC121476860
subclass of: SO_0000673
so part of: LOC121476860
location: join(218222..218304,220794..220898,228293..228445)
location: region:218222-228445:1
so has part: feature:218222-218304:1:exon
so has part: feature:220794-220898:1:exon
so has part: feature:228293-228445:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:218222-218304:1:exon

position:218304:1
position: 218304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:220794-220898:1:exon

position:220794:1
position: 220794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220898:1
position: 220898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:228293-228445:1:exon

position:228293:1
position: 228293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121476821
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121476821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(245054..245956)
location: region:245054-245956:-1
so has part: feature:245054-245956:-1:exon
subclass of: SO_0000010

121476821
type: Gene
SIO_000068: ncbigene

position:245054:-1
position: 245054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245956:-1
position: 245956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245054-245956:-1:exon

LOC121476821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LOC121476821
product: extensin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041730900.1
SIO_010081: LOC121476821
subclass of: SO_0000673
so part of: LOC121476821
location: complement(245054..245956)
location: region:245054-245956:-1
so has part: feature:245054-245956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:245054-245956:-1:exon

LOC121476821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LOC121476821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: extensin-like
translation: MEEQVETSVVSQEPTRMEKSTDTEEDNIAGPLFMNKTTQFPSVHAEVLLEPEETPEAACGGSPKPSTPKAVTPPSSPSPAAVSQEFAYVPADPAQFAAQMLAIAASKAGQPPPYSNMWTLYCLTDMNKQSRPSPPPAPGPFPQTTLYLSNPKDPQFLQQPPKVTSPTYVMMDDSKKTSAPPFILVGSNVQEAQDWKPLPGHAVVSQSDALKRYAAIQVPIAVPADQKFQKHSPNPQNVSPPTSGQDVPRPQSPVFLSVAFPVEDVAKKGSGSGDKCTPFRSYGIAGEITLTTAPVRRGET
SIO_010081: LOC121476821
subclass of: SO_0000673
so part of: LOC121476821
location: complement(245054..245956)
location: region:245054-245956:-1
so has part: feature:245054-245956:-1:exon

XP_041586834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245054-245956:-1:exon

RASA3
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: RASA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 266716..374772
location: region:266716-374772:1
so has part: feature:266716-374772:1:exon
subclass of: SO_0000010

121476868
type: Gene
SIO_000068: ncbigene

position:266716:1
position: 266716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374772:1
position: 374772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266716-374772:1:exon

RASA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: RASA3
product: RAS p21 protein activator 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041731016.1
SIO_010081: RASA3
subclass of: SO_0000673
so part of: RASA3
location: join(266716..266927,314411..314528,324231..324334,333505..333599,340183..340259,348867..348947,349325..349397,351648..351724,353324..353428,354933..355089,355883..356031,357024..357138,357875..357949,358706..358829,359900..360006,360756..360833,361536..361613,362573..362646,363411..363517,363982..364064,366657..366865,368309..368412,372673..372856,373344..374772)
location: region:266716-374772:1
so has part: feature:266716-266927:1:exon
so has part: feature:314411-314528:1:exon
so has part: feature:324231-324334:1:exon
so has part: feature:333505-333599:1:exon
so has part: feature:340183-340259:1:exon
so has part: feature:348867-348947:1:exon
so has part: feature:349325-349397:1:exon
so has part: feature:351648-351724:1:exon
so has part: feature:353324-353428:1:exon
so has part: feature:354933-355089:1:exon
so has part: feature:355883-356031:1:exon
so has part: feature:357024-357138:1:exon
so has part: feature:357875-357949:1:exon
so has part: feature:358706-358829:1:exon
so has part: feature:359900-360006:1:exon
so has part: feature:360756-360833:1:exon
so has part: feature:361536-361613:1:exon
so has part: feature:362573-362646:1:exon
so has part: feature:363411-363517:1:exon
so has part: feature:363982-364064:1:exon
so has part: feature:366657-366865:1:exon
so has part: feature:368309-368412:1:exon
so has part: feature:372673-372856:1:exon
so has part: feature:373344-374772:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:266716-266927:1:exon

position:266927:1
position: 266927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:314411-314528:1:exon

position:314411:1
position: 314411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314528:1
position: 314528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:324231-324334:1:exon

position:324231:1
position: 324231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324334:1
position: 324334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:333505-333599:1:exon

position:333505:1
position: 333505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333599:1
position: 333599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:340183-340259:1:exon

position:340183:1
position: 340183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340259:1
position: 340259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:348867-348947:1:exon

position:348867:1
position: 348867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348947:1
position: 348947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:349325-349397:1:exon

position:349325:1
position: 349325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349397:1
position: 349397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:351648-351724:1:exon

position:351648:1
position: 351648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351724:1
position: 351724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:353324-353428:1:exon

position:353324:1
position: 353324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353428:1
position: 353428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:354933-355089:1:exon

position:354933:1
position: 354933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355089:1
position: 355089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:355883-356031:1:exon

position:355883:1
position: 355883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356031:1
position: 356031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:357024-357138:1:exon

position:357024:1
position: 357024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357138:1
position: 357138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:357875-357949:1:exon

position:357875:1
position: 357875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357949:1
position: 357949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:358706-358829:1:exon

position:358706:1
position: 358706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358829:1
position: 358829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:359900-360006:1:exon

position:359900:1
position: 359900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360006:1
position: 360006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:360756-360833:1:exon

position:360756:1
position: 360756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360833:1
position: 360833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:361536-361613:1:exon

position:361536:1
position: 361536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361613:1
position: 361613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:362573-362646:1:exon

position:362573:1
position: 362573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362646:1
position: 362646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:363411-363517:1:exon

position:363411:1
position: 363411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363517:1
position: 363517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:363982-364064:1:exon

position:363982:1
position: 363982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364064:1
position: 364064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:366657-366865:1:exon

position:366657:1
position: 366657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366865:1
position: 366865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:368309-368412:1:exon

position:368309:1
position: 368309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368412:1
position: 368412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:372673-372856:1:exon

position:372673:1
position: 372673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372856:1
position: 372856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:373344-374772:1:exon

position:373344:1
position: 373344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RASA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: RASA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating protein 3
translation: MAVEDEGLRVFQSVRIKIGEAKNLPTYPGPNKMRDCYCTVNLDREEVFRTKIVEKSLCPFYGEDFYCEIPRSFRHLSFYIFDRDVFRRDSIIGKVAIQKEDLPKYHNRDTWFQLQHVDADSEVQGKVHLELRLSEVITDTGVVCHKLAARILECQGLPIVNGQCDPYATVTLAGPYRSEAKKTKVKKKTNNPQFDEVFYFEVTRPCSYNRKSHFDFEEEDVDKLEIRVDLWNASNLKFGDEFLGELRVPLNVLRQSSSYEAWYFLQPRDNGSKSLKPGDLGSLRLNVVYTEDHVFSSDYYSPLRDLLLRSADVEPVSASAAHVLGEVCREKQEAAIPLVRLFLHYGRVVPFISAIANAEVRRTQDPNTIFRGNSLTSKCIDETMKLAGMHYLHMTLKPAIEEICQSHKSCEIDPVKLKDGESLENNMENLRQYVDRIFNVITKSGVSCPTVMCDIFFSLREAAAKRFQDDLDVRYTAVSSFIFLRFFAPAILSPNLFQLTPHHTDPQTSRTLTLISKTIQTLGSLSKSKSASFKESYMAAFYEFFNEQKYADAVKNFLDLISSSGRRDPKSIEQPILLKEGFMIKRAQGRKRFGMKNFKKRWFCLTNHEFTYQKSKGDQPLCSIPIENILAVEKLEEESFKMKNMFQVIQPERALYIQANNCVEAKAWIDILTKVSQCNQKRLTVYHPSAYLNGHWLCCRASSDTAPGCSPCTGGLPANIQLDIDGDRETERIYSLFNSYMSKLEKMQEACGSRSVYDGPEQEEYSTFIIDDPQETYKTLKQVITGVGALEQEHAQYRRDKFKKTKYGSQEHPIGDKSFQSYIRQQSETSTHSI
SIO_010081: RASA3
subclass of: SO_0000673
so part of: RASA3
location: join(266873..266927,314411..314528,324231..324334,333505..333599,340183..340259,348867..348947,349325..349397,351648..351724,353324..353428,354933..355089,355883..356031,357024..357138,357875..357949,358706..358829,359900..360006,360756..360833,361536..361613,362573..362646,363411..363517,363982..364064,366657..366865,368309..368412,372673..372856,373344..373419)
location: region:266873-373419:1
so has part: feature:266873-266927:1:exon
so has part: feature:314411-314528:1:exon
so has part: feature:324231-324334:1:exon
so has part: feature:333505-333599:1:exon
so has part: feature:340183-340259:1:exon
so has part: feature:348867-348947:1:exon
so has part: feature:349325-349397:1:exon
so has part: feature:351648-351724:1:exon
so has part: feature:353324-353428:1:exon
so has part: feature:354933-355089:1:exon
so has part: feature:355883-356031:1:exon
so has part: feature:357024-357138:1:exon
so has part: feature:357875-357949:1:exon
so has part: feature:358706-358829:1:exon
so has part: feature:359900-360006:1:exon
so has part: feature:360756-360833:1:exon
so has part: feature:361536-361613:1:exon
so has part: feature:362573-362646:1:exon
so has part: feature:363411-363517:1:exon
so has part: feature:363982-364064:1:exon
so has part: feature:366657-366865:1:exon
so has part: feature:368309-368412:1:exon
so has part: feature:372673-372856:1:exon
so has part: feature:373344-373419:1:exon

XP_041586950.1
type: Protein
SIO_000068: ncbiprotein

position:266873:1
position: 266873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373419:1
position: 373419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266873-266927:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314411-314528:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324231-324334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333505-333599:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340183-340259:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:348867-348947:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:349325-349397:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:351648-351724:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:353324-353428:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:354933-355089:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:355883-356031:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:357024-357138:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:357875-357949:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:358706-358829:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:359900-360006:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:360756-360833:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:361536-361613:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:362573-362646:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:363411-363517:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:363982-364064:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:366657-366865:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:368309-368412:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:372673-372856:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:373344-373419:1:exon

C16H13orf46
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: C16H13orf46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 377549..388704
location: region:377549-388704:1
so has part: feature:377549-388704:1:exon
subclass of: SO_0000010

121476869
type: Gene
SIO_000068: ncbigene

position:377549:1
position: 377549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388704:1
position: 388704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377549-388704:1:exon

C16H13orf46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: C16H13orf46
product: chromosome 16 C13orf46 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041731017.1
SIO_010081: C16H13orf46
subclass of: SO_0000673
so part of: C16H13orf46
location: join(377549..377735,380499..380550,381067..381175,381280..381327,382195..382242,383790..383857,385754..385834,388412..388704)
location: region:377549-388704:1
so has part: feature:377549-377735:1:exon
so has part: feature:380499-380550:1:exon
so has part: feature:381067-381175:1:exon
so has part: feature:381280-381327:1:exon
so has part: feature:382195-382242:1:exon
so has part: feature:383790-383857:1:exon
so has part: feature:385754-385834:1:exon
so has part: feature:388412-388704:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377549-377735:1:exon

position:377735:1
position: 377735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:380499-380550:1:exon

position:380499:1
position: 380499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380550:1
position: 380550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:381067-381175:1:exon

position:381067:1
position: 381067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381175:1
position: 381175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:381280-381327:1:exon

position:381280:1
position: 381280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381327:1
position: 381327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:382195-382242:1:exon

position:382195:1
position: 382195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382242:1
position: 382242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:383790-383857:1:exon

position:383790:1
position: 383790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383857:1
position: 383857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:385754-385834:1:exon

position:385754:1
position: 385754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385834:1
position: 385834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:388412-388704:1:exon

position:388412:1
position: 388412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C16H13orf46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: C16H13orf46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C13orf46 homolog
translation: MEKDAAAHRRHRPGPGAPPPGVAPGHLKAASEIAELQRSRSVGGLHQKGDPPSCIKKPSKELESEDQGRDLRSDIEDASCQADPEEDKQEKNQDALEKLDTDGGRTEPEGKGCRPEEQEPESVKLDEPPGKEKPSEFVEIDLGDRAEEVVTGAVREEKRPQMDVGDLSEDETKTSWVCCIPYSTRRKAKESV
SIO_010081: C16H13orf46
subclass of: SO_0000673
so part of: C16H13orf46
location: join(377549..377735,380499..380550,381067..381175,381280..381327,382195..382242,383790..383857,385754..385820)
location: region:377549-385820:1
so has part: feature:377549-377735:1:exon
so has part: feature:380499-380550:1:exon
so has part: feature:381067-381175:1:exon
so has part: feature:381280-381327:1:exon
so has part: feature:382195-382242:1:exon
so has part: feature:383790-383857:1:exon
so has part: feature:385754-385820:1:exon

XP_041586951.1
type: Protein
SIO_000068: ncbiprotein

position:385820:1
position: 385820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377549-377735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:380499-380550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:381067-381175:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381280-381327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:382195-382242:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:383790-383857:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:385754-385820:1:exon

GAS6
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: GAS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 462202..495815
location: region:462202-495815:1
so has part: feature:462202-495815:1:exon
subclass of: SO_0000010

121476994
type: Gene
SIO_000068: ncbigene

position:462202:1
position: 462202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495815:1
position: 495815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462202-495815:1:exon

GAS6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: GAS6
product: growth arrest specific 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041731168.1
SIO_010081: GAS6
subclass of: SO_0000673
so part of: GAS6
location: join(462202..462792,463143..463309,474324..474348,475748..475810,484941..485063,485762..485883,486344..486462,486793..486982,489182..489346,490399..490567,492679..492851,494222..494450,495379..495815)
location: region:462202-495815:1
so has part: feature:462202-462792:1:exon
so has part: feature:463143-463309:1:exon
so has part: feature:474324-474348:1:exon
so has part: feature:475748-475810:1:exon
so has part: feature:484941-485063:1:exon
so has part: feature:485762-485883:1:exon
so has part: feature:486344-486462:1:exon
so has part: feature:486793-486982:1:exon
so has part: feature:489182-489346:1:exon
so has part: feature:490399-490567:1:exon
so has part: feature:492679-492851:1:exon
so has part: feature:494222-494450:1:exon
so has part: feature:495379-495815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:462202-462792:1:exon

position:462792:1
position: 462792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:463143-463309:1:exon

position:463143:1
position: 463143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463309:1
position: 463309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:474324-474348:1:exon

position:474324:1
position: 474324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474348:1
position: 474348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:475748-475810:1:exon

position:475748:1
position: 475748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475810:1
position: 475810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:484941-485063:1:exon

position:484941:1
position: 484941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485063:1
position: 485063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:485762-485883:1:exon

position:485762:1
position: 485762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485883:1
position: 485883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:486344-486462:1:exon

position:486344:1
position: 486344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486462:1
position: 486462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:486793-486982:1:exon

position:486793:1
position: 486793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486982:1
position: 486982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:489182-489346:1:exon

position:489182:1
position: 489182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489346:1
position: 489346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:490399-490567:1:exon

position:490399:1
position: 490399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490567:1
position: 490567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:492679-492851:1:exon

position:492679:1
position: 492679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492851:1
position: 492851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:494222-494450:1:exon

position:494222:1
position: 494222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494450:1
position: 494450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:495379-495815:1:exon

position:495379:1
position: 495379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GAS6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: GAS6
product: growth arrest specific 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041731167.1
SIO_010081: GAS6
subclass of: SO_0000673
so part of: GAS6
location: join(462205..462792,463143..463309,474324..474348,475748..475810,481084..481206,481852..481974,484941..485063,485762..485883,486344..486462,486793..486982,489182..489346,490399..490567,492679..492851,494222..494450,495379..495815)
location: region:462205-495815:1
so has part: feature:462205-462792:1:exon
so has part: feature:463143-463309:1:exon
so has part: feature:474324-474348:1:exon
so has part: feature:475748-475810:1:exon
so has part: feature:481084-481206:1:exon
so has part: feature:481852-481974:1:exon
so has part: feature:484941-485063:1:exon
so has part: feature:485762-485883:1:exon
so has part: feature:486344-486462:1:exon
so has part: feature:486793-486982:1:exon
so has part: feature:489182-489346:1:exon
so has part: feature:490399-490567:1:exon
so has part: feature:492679-492851:1:exon
so has part: feature:494222-494450:1:exon
so has part: feature:495379-495815:1:exon

position:462205:1
position: 462205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462205-462792:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463143-463309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474324-474348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475748-475810:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:481084-481206:1:exon

position:481084:1
position: 481084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481206:1
position: 481206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:481852-481974:1:exon

position:481852:1
position: 481852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481974:1
position: 481974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:484941-485063:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:485762-485883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:486344-486462:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:486793-486982:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:489182-489346:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:490399-490567:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:492679-492851:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:494222-494450:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:495379-495815:1:exon

GAS6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: GAS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest-specific protein 6 isoform X1
translation: MPPPPGPAAALGTALLLLLLASESAHAVMLRAREAAQFLRPRQRRAYQVFEEAKQGHLERECIEELCSQEEAREVFENDPETDYFYPRYLDCITKHGSPYTKSPDFVTCVQNLPDQCSPNPCTKEGTQVCQDLMGNFYCQCRAGWGGRLCDRDVNECGQQNGGCNHICFNKPGSFHCACYSGYALSHDGRTCQDVDECANGAACGEARCQNLPGSYSCLCDEGYAFSSQEKACRDVDECAEGRCEQVCVNSPGGYSCHCDGRGGLKLSPDMNTCEDILPCVPFNVAKSMKSLYLGRMFSGTPVIRLRFKRLQPTRLVTEFDFRTYDPEGVLFFAGGHQDSTWIVLGLRAGRLELQLRYHGVGRVTSSGPVINHGTWQTISVEELDRNLVIKVNKDAVMKIAVAGDLFQLDRGLYHLNLTVGGIPFKEKDLVQPINPRLDGCMRSWNWLNGEDTTIQETVKANPKMQCFSVTEKGSFYPGSGFAFYSLDYTRTSLDVGTEATWQIEVMARIRPAADTGVLLALVAGDHVVALSVALVDYHSTKKLKKQLVILAVESVTLALMEMKVCDGQEHQVAVSVRKDEATLEVDGTKGQSEVSSAGLRESLAVLGRHLQGSVLTFIGGLPDVPVTSAPVTAFYRGCMTLEVNQKALDLDEAAYKHSDITSHSCPPVEQEDRRPRSPQPTT
SIO_010081: GAS6
subclass of: SO_0000673
so part of: GAS6
location: join(462714..462792,463143..463309,474324..474348,475748..475810,481084..481206,481852..481974,484941..485063,485762..485883,486344..486462,486793..486982,489182..489346,490399..490567,492679..492851,494222..494450,495379..495560)
location: region:462714-495560:1
so has part: feature:462714-462792:1:exon
so has part: feature:463143-463309:1:exon
so has part: feature:474324-474348:1:exon
so has part: feature:475748-475810:1:exon
so has part: feature:481084-481206:1:exon
so has part: feature:481852-481974:1:exon
so has part: feature:484941-485063:1:exon
so has part: feature:485762-485883:1:exon
so has part: feature:486344-486462:1:exon
so has part: feature:486793-486982:1:exon
so has part: feature:489182-489346:1:exon
so has part: feature:490399-490567:1:exon
so has part: feature:492679-492851:1:exon
so has part: feature:494222-494450:1:exon
so has part: feature:495379-495560:1:exon

XP_041587101.1
type: Protein
SIO_000068: ncbiprotein

position:462714:1
position: 462714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495560:1
position: 495560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462714-462792:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463143-463309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474324-474348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475748-475810:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:481084-481206:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:481852-481974:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:484941-485063:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:485762-485883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:486344-486462:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:486793-486982:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:489182-489346:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:490399-490567:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:492679-492851:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:494222-494450:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:495379-495560:1:exon

GAS6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: GAS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest-specific protein 6 isoform X2
translation: MPPPPGPAAALGTALLLLLLASESAHAVMLRAREAAQFLRPRQRRAYQVFEEAKQGHLERECIEELCSQEEAREVFENDPETDYFYPRYLDCITKHGSPYTKSPDFVTCVQNVDECANGAACGEARCQNLPGSYSCLCDEGYAFSSQEKACRDVDECAEGRCEQVCVNSPGGYSCHCDGRGGLKLSPDMNTCEDILPCVPFNVAKSMKSLYLGRMFSGTPVIRLRFKRLQPTRLVTEFDFRTYDPEGVLFFAGGHQDSTWIVLGLRAGRLELQLRYHGVGRVTSSGPVINHGTWQTISVEELDRNLVIKVNKDAVMKIAVAGDLFQLDRGLYHLNLTVGGIPFKEKDLVQPINPRLDGCMRSWNWLNGEDTTIQETVKANPKMQCFSVTEKGSFYPGSGFAFYSLDYTRTSLDVGTEATWQIEVMARIRPAADTGVLLALVAGDHVVALSVALVDYHSTKKLKKQLVILAVESVTLALMEMKVCDGQEHQVAVSVRKDEATLEVDGTKGQSEVSSAGLRESLAVLGRHLQGSVLTFIGGLPDVPVTSAPVTAFYRGCMTLEVNQKALDLDEAAYKHSDITSHSCPPVEQEDRRPRSPQPTT
SIO_010081: GAS6
subclass of: SO_0000673
so part of: GAS6
location: join(462714..462792,463143..463309,474324..474348,475748..475810,484941..485063,485762..485883,486344..486462,486793..486982,489182..489346,490399..490567,492679..492851,494222..494450,495379..495560)
location: region:462714-495560:1
so has part: feature:462714-462792:1:exon
so has part: feature:463143-463309:1:exon
so has part: feature:474324-474348:1:exon
so has part: feature:475748-475810:1:exon
so has part: feature:484941-485063:1:exon
so has part: feature:485762-485883:1:exon
so has part: feature:486344-486462:1:exon
so has part: feature:486793-486982:1:exon
so has part: feature:489182-489346:1:exon
so has part: feature:490399-490567:1:exon
so has part: feature:492679-492851:1:exon
so has part: feature:494222-494450:1:exon
so has part: feature:495379-495560:1:exon

XP_041587102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:462714-462792:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463143-463309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474324-474348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475748-475810:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484941-485063:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:485762-485883:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:486344-486462:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:486793-486982:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:489182-489346:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:490399-490567:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:492679-492851:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:494222-494450:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:495379-495560:1:exon

TMEM255B
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: TMEM255B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(500207..537595)
location: region:500207-537595:-1
so has part: feature:500207-537595:-1:exon
subclass of: SO_0000010

121477172
type: Gene
SIO_000068: ncbigene

position:500207:-1
position: 500207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537595:-1
position: 537595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500207-537595:-1:exon

TMEM255B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: TMEM255B
product: transmembrane protein 255B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_041731401.1
SIO_010081: TMEM255B
subclass of: SO_0000673
so part of: TMEM255B
location: complement(join(500207..500278,501167..501298,501396..501458,506713..506856,508664..508823,509987..510072,512232..512312,521075..521164,531024..531086,533804..533946,537550..537595))
location: region:500207-537595:-1
so has part: feature:537550-537595:-1:exon
so has part: feature:533804-533946:-1:exon
so has part: feature:531024-531086:-1:exon
so has part: feature:521075-521164:-1:exon
so has part: feature:512232-512312:-1:exon
so has part: feature:509987-510072:-1:exon
so has part: feature:508664-508823:-1:exon
so has part: feature:506713-506856:-1:exon
so has part: feature:501396-501458:-1:exon
so has part: feature:501167-501298:-1:exon
so has part: feature:500207-500278:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:537550-537595:-1:exon

position:537550:-1
position: 537550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:533804-533946:-1:exon

position:533804:-1
position: 533804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533946:-1
position: 533946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:531024-531086:-1:exon

position:531024:-1
position: 531024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531086:-1
position: 531086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:521075-521164:-1:exon

position:521075:-1
position: 521075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521164:-1
position: 521164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:512232-512312:-1:exon

position:512232:-1
position: 512232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512312:-1
position: 512312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:509987-510072:-1:exon

position:509987:-1
position: 509987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510072:-1
position: 510072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:508664-508823:-1:exon

position:508664:-1
position: 508664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508823:-1
position: 508823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:506713-506856:-1:exon

position:506713:-1
position: 506713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506856:-1
position: 506856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:501396-501458:-1:exon

position:501396:-1
position: 501396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501458:-1
position: 501458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:501167-501298:-1:exon

position:501167:-1
position: 501167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501298:-1
position: 501298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:500207-500278:-1:exon

position:500278:-1
position: 500278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM255B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: TMEM255B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 255B
translation: MQPSVPGPLALLDATEGFAKRKKTSLWFVGSLLVVSVSILTVGLTATTMTENVTMGGYYPGIILGFGAFLGIIGINLVENRRQVLFAAIVFISFGVVAAFCCAIVDGMFAARHIEPRPLTAGRCQFFASEVGYVHDTYQTEVTCHSSNGQCQLKVRSSTCYCCDLYNCQSTEHPPAYYEFVGVHRCQDVLHLYWLLWASALLNVLGVLLGIVTAAVLGAFKDMVPLSQLAYGPSALPQILYNPAQHILAYTGFCPSPVTLPTCSSYPLPLQVNVQVPTGKQRTWDVGRVVGQEWDGVWGGSRAPTGHGPALTFAEEIPLQRRAGNGECGGSQPCAWNREYSVCPVNKNETLIITVKSGP
SIO_010081: TMEM255B
subclass of: SO_0000673
so part of: TMEM255B
location: complement(join(500207..500278,501167..501298,501396..501458,506713..506856,508664..508823,509987..510072,512232..512312,521075..521164,531024..531086,533804..533946,537550..537595))
location: region:500207-537595:-1
so has part: feature:537550-537595:-1:exon
so has part: feature:533804-533946:-1:exon
so has part: feature:531024-531086:-1:exon
so has part: feature:521075-521164:-1:exon
so has part: feature:512232-512312:-1:exon
so has part: feature:509987-510072:-1:exon
so has part: feature:508664-508823:-1:exon
so has part: feature:506713-506856:-1:exon
so has part: feature:501396-501458:-1:exon
so has part: feature:501167-501298:-1:exon
so has part: feature:500207-500278:-1:exon

XP_041587335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537550-537595:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533804-533946:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:531024-531086:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:521075-521164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512232-512312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:509987-510072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508664-508823:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:506713-506856:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:501396-501458:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:501167-501298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:500207-500278:-1:exon

GRK1
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: GRK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(545878..561604)
location: region:545878-561604:-1
so has part: feature:545878-561604:-1:exon
subclass of: SO_0000010

121477034
type: Gene
SIO_000068: ncbigene

position:545878:-1
position: 545878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561604:-1
position: 561604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545878-561604:-1:exon

GRK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: GRK1
product: G protein-coupled receptor kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041731214.1
SIO_010081: GRK1
subclass of: SO_0000673
so part of: GRK1
location: complement(join(545878..548995,549944..550145,552087..552211,555145..555228,555708..555865,559009..559136,560906..561604))
location: region:545878-561604:-1
so has part: feature:560906-561604:-1:exon
so has part: feature:559009-559136:-1:exon
so has part: feature:555708-555865:-1:exon
so has part: feature:555145-555228:-1:exon
so has part: feature:552087-552211:-1:exon
so has part: feature:549944-550145:-1:exon
so has part: feature:545878-548995:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:560906-561604:-1:exon

position:560906:-1
position: 560906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:559009-559136:-1:exon

position:559009:-1
position: 559009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559136:-1
position: 559136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:555708-555865:-1:exon

position:555708:-1
position: 555708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555865:-1
position: 555865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:555145-555228:-1:exon

position:555145:-1
position: 555145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555228:-1
position: 555228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:552087-552211:-1:exon

position:552087:-1
position: 552087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552211:-1
position: 552211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:549944-550145:-1:exon

position:549944:-1
position: 549944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550145:-1
position: 550145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:545878-548995:-1:exon

position:548995:-1
position: 548995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: GRK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhodopsin kinase GRK1
translation: MDFGSLETVVANSAFIAARGSFDGSSGPSSRDRKYLAKLKLPPLSKCEGLRESLDLAFQSVCSEQPIGKRLFQQFLGADERHVPALELWKDIEDYDTADDDLRPQKARAILAEYLDPQAKLFCSFLDEGVVAKFREGPTASEDGLFQPLLQATLEHLSQAPFQEYLGSLYFQRFLQWKWLEAQPTGEDWFLDFRVLGKGGFGEVSACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVNEESPGFQEPRAIFYTAQIISGLEHLHQRGIVYRDLKPENVLLDDDGNIRISDLGLAVELKDGQTKTKGYAGTPGFMAPELLRGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLSEAIKYPDKFSQVSKDFCEALLEKDPEKRLGFRDGTCDGLRASPLFKDINWRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFSTVKGVIFDKADTEFFQEFATGNCSIPWQEEMIETGVFAELNVWRADGQMPDDMKGIAVEEAAPASKSGMCLVS
SIO_010081: GRK1
subclass of: SO_0000673
so part of: GRK1
location: complement(join(548697..548995,549944..550145,552087..552211,555145..555228,555708..555865,559009..559136,560906..561604))
location: region:548697-561604:-1
so has part: feature:560906-561604:-1:exon
so has part: feature:559009-559136:-1:exon
so has part: feature:555708-555865:-1:exon
so has part: feature:555145-555228:-1:exon
so has part: feature:552087-552211:-1:exon
so has part: feature:549944-550145:-1:exon
so has part: feature:548697-548995:-1:exon

XP_041587148.1
type: Protein
SIO_000068: ncbiprotein

position:548697:-1
position: 548697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560906-561604:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559009-559136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555708-555865:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:555145-555228:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552087-552211:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:549944-550145:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:548697-548995:-1:exon

ATP4B
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: ATP4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 569435..574752
location: region:569435-574752:1
so has part: feature:569435-574752:1:exon
subclass of: SO_0000010

121477139
type: Gene
SIO_000068: ncbigene

position:569435:1
position: 569435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574752:1
position: 574752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569435-574752:1:exon

ATP4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ATP4B
product: ATPase H+/K+ transporting subunit beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_041731363.1
SIO_010081: ATP4B
subclass of: SO_0000673
so part of: ATP4B
location: join(569435..569546,569910..570038,571746..571859,572007..572206,573043..573099,573979..574077,574591..574752)
location: region:569435-574752:1
so has part: feature:569435-569546:1:exon
so has part: feature:569910-570038:1:exon
so has part: feature:571746-571859:1:exon
so has part: feature:572007-572206:1:exon
so has part: feature:573043-573099:1:exon
so has part: feature:573979-574077:1:exon
so has part: feature:574591-574752:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:569435-569546:1:exon

position:569546:1
position: 569546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:569910-570038:1:exon

position:569910:1
position: 569910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570038:1
position: 570038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:571746-571859:1:exon

position:571746:1
position: 571746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571859:1
position: 571859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:572007-572206:1:exon

position:572007:1
position: 572007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572206:1
position: 572206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:573043-573099:1:exon

position:573043:1
position: 573043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573099:1
position: 573099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:573979-574077:1:exon

position:573979:1
position: 573979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574077:1
position: 574077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:574591-574752:1:exon

position:574591:1
position: 574591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ATP4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium-transporting ATPase subunit beta
translation: MAALQEKKSCSQRMEEFQRYCWNPDTGQMLGRTLSRWVWISLYYVAFYVVMTGIFALCIYTLMCTLDPYTPDYQDQLKSPGVTLRPDVYGEKGLDISYNVSDNRTWVHLVNTLHNFLAGYSPTSQEDNVNCTSEKYFFQDVFGAPNHTKFSCKFMADMLQNCSGLTDPNFGFAEGKPCFIIKMNRIVNFLPSNSTAPRADCTFLDQHKDDRPLQVEYYPPNGTFSLHYFPYYGKKAQPHYSNPLVAAKLLNVPRNTEVLIVCKILADYVTFDNPHDPYEGKVEFKLTIQQ
SIO_010081: ATP4B
subclass of: SO_0000673
so part of: ATP4B
location: join(569435..569546,569910..570038,571746..571859,572007..572206,573043..573099,573979..574077,574591..574752)
location: region:569435-574752:1
so has part: feature:569435-569546:1:exon
so has part: feature:569910-570038:1:exon
so has part: feature:571746-571859:1:exon
so has part: feature:572007-572206:1:exon
so has part: feature:573043-573099:1:exon
so has part: feature:573979-574077:1:exon
so has part: feature:574591-574752:1:exon

XP_041587297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:569435-569546:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:569910-570038:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571746-571859:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572007-572206:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573043-573099:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:573979-574077:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:574591-574752:1:exon

TFDP1
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: TFDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(576091..619102)
location: region:576091-619102:-1
so has part: feature:576091-619102:-1:exon
subclass of: SO_0000010

121477091
type: Gene
SIO_000068: ncbigene

position:576091:-1
position: 576091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619102:-1
position: 619102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576091-619102:-1:exon

TFDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: TFDP1
product: transcription factor Dp-1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041731309.1
SIO_010081: TFDP1
subclass of: SO_0000673
so part of: TFDP1
location: complement(join(576091..577401,580819..580897,581672..581838,582543..582694,584472..584540,585071..585214,585591..585756,586828..586949,590416..590522,598874..598940,618288..618362,619065..619102))
location: region:576091-619102:-1
so has part: feature:619065-619102:-1:exon
so has part: feature:618288-618362:-1:exon
so has part: feature:598874-598940:-1:exon
so has part: feature:590416-590522:-1:exon
so has part: feature:586828-586949:-1:exon
so has part: feature:585591-585756:-1:exon
so has part: feature:585071-585214:-1:exon
so has part: feature:584472-584540:-1:exon
so has part: feature:582543-582694:-1:exon
so has part: feature:581672-581838:-1:exon
so has part: feature:580819-580897:-1:exon
so has part: feature:576091-577401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:619065-619102:-1:exon

position:619065:-1
position: 619065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:618288-618362:-1:exon

position:618288:-1
position: 618288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618362:-1
position: 618362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:598874-598940:-1:exon

position:598874:-1
position: 598874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598940:-1
position: 598940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:590416-590522:-1:exon

position:590416:-1
position: 590416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590522:-1
position: 590522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:586828-586949:-1:exon

position:586828:-1
position: 586828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586949:-1
position: 586949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:585591-585756:-1:exon

position:585591:-1
position: 585591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585756:-1
position: 585756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:585071-585214:-1:exon

position:585071:-1
position: 585071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585214:-1
position: 585214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:584472-584540:-1:exon

position:584472:-1
position: 584472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584540:-1
position: 584540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:582543-582694:-1:exon

position:582543:-1
position: 582543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582694:-1
position: 582694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:581672-581838:-1:exon

position:581672:-1
position: 581672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581838:-1
position: 581838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:580819-580897:-1:exon

position:580819:-1
position: 580819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580897:-1
position: 580897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:576091-577401:-1:exon

position:577401:-1
position: 577401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TFDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: TFDP1
product: transcription factor Dp-1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041731308.1
SIO_010081: TFDP1
subclass of: SO_0000673
so part of: TFDP1
location: complement(join(576091..577401,580819..580897,581672..581838,582543..582694,584472..584540,585071..585214,585591..585756,586828..586949,590416..590522,598874..598940,618288..618362,618970..619091))
location: region:576091-619091:-1
so has part: feature:618970-619091:-1:exon
so has part: feature:618288-618362:-1:exon
so has part: feature:598874-598940:-1:exon
so has part: feature:590416-590522:-1:exon
so has part: feature:586828-586949:-1:exon
so has part: feature:585591-585756:-1:exon
so has part: feature:585071-585214:-1:exon
so has part: feature:584472-584540:-1:exon
so has part: feature:582543-582694:-1:exon
so has part: feature:581672-581838:-1:exon
so has part: feature:580819-580897:-1:exon
so has part: feature:576091-577401:-1:exon

position:619091:-1
position: 619091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618970-619091:-1:exon

position:618970:-1
position: 618970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:618288-618362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:598874-598940:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590416-590522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:586828-586949:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:585591-585756:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585071-585214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:584472-584540:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:582543-582694:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:581672-581838:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:580819-580897:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:576091-577401:-1:exon

TFDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: TFDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Dp-1
translation: MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSAVNTLGKQLLPKTFGQSNVNIAQQVVIGTPQRPAAPNTIVVGSPHTPNTHFVSQNQPSDPSPWSAGKRHRKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRQAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVLKRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGSIGGVFVTSSVSTSNGTRLSASDLTNGADGMLATSSSGSQYSGSRVETPVSYVGEDEEEDDDFNENEEED
SIO_010081: TFDP1
subclass of: SO_0000673
so part of: TFDP1
location: complement(join(577254..577401,580819..580897,581672..581838,582543..582694,584472..584540,585071..585214,585591..585756,586828..586949,590416..590522,598874..598940,618288..618299))
location: region:577254-618299:-1
so has part: feature:618288-618299:-1:exon
so has part: feature:598874-598940:-1:exon
so has part: feature:590416-590522:-1:exon
so has part: feature:586828-586949:-1:exon
so has part: feature:585591-585756:-1:exon
so has part: feature:585071-585214:-1:exon
so has part: feature:584472-584540:-1:exon
so has part: feature:582543-582694:-1:exon
so has part: feature:581672-581838:-1:exon
so has part: feature:580819-580897:-1:exon
so has part: feature:577254-577401:-1:exon

XP_041587242.1
type: Protein
SIO_000068: ncbiprotein

position:577254:-1
position: 577254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618299:-1
position: 618299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618288-618299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:598874-598940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590416-590522:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:586828-586949:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:585591-585756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:585071-585214:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:584472-584540:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:582543-582694:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:581672-581838:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:580819-580897:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:577254-577401:-1:exon

TFDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: TFDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Dp-1
translation: MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSAVNTLGKQLLPKTFGQSNVNIAQQVVIGTPQRPAAPNTIVVGSPHTPNTHFVSQNQPSDPSPWSAGKRHRKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRQAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVLKRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGSIGGVFVTSSVSTSNGTRLSASDLTNGADGMLATSSSGSQYSGSRVETPVSYVGEDEEEDDDFNENEEED
SIO_010081: TFDP1
subclass of: SO_0000673
so part of: TFDP1
location: complement(join(577254..577401,580819..580897,581672..581838,582543..582694,584472..584540,585071..585214,585591..585756,586828..586949,590416..590522,598874..598940,618288..618299))
location: region:577254-618299:-1
so has part: feature:618288-618299:-1:exon
so has part: feature:598874-598940:-1:exon
so has part: feature:590416-590522:-1:exon
so has part: feature:586828-586949:-1:exon
so has part: feature:585591-585756:-1:exon
so has part: feature:585071-585214:-1:exon
so has part: feature:584472-584540:-1:exon
so has part: feature:582543-582694:-1:exon
so has part: feature:581672-581838:-1:exon
so has part: feature:580819-580897:-1:exon
so has part: feature:577254-577401:-1:exon

XP_041587243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:618288-618299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:598874-598940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590416-590522:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:586828-586949:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:585591-585756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:585071-585214:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:584472-584540:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:582543-582694:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:581672-581838:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:580819-580897:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:577254-577401:-1:exon

TMCO3
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: TMCO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(641623..691326)
location: region:641623-691326:-1
so has part: feature:641623-691326:-1:exon
subclass of: SO_0000010

121476798
type: Gene
SIO_000068: ncbigene

position:641623:-1
position: 641623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691326:-1
position: 691326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641623-691326:-1:exon

TMCO3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: TMCO3
product: transmembrane and coiled-coil domains 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041730880.1
SIO_010081: TMCO3
subclass of: SO_0000673
so part of: TMCO3
location: complement(join(641623..642293,644433..644582,645779..645858,649756..649906,653597..653792,664366..664486,672337..672523,673712..673804,676615..676743,677780..677971,679471..679650,682181..682705,688165..688270,690953..691326))
location: region:641623-691326:-1
so has part: feature:690953-691326:-1:exon
so has part: feature:688165-688270:-1:exon
so has part: feature:682181-682705:-1:exon
so has part: feature:679471-679650:-1:exon
so has part: feature:677780-677971:-1:exon
so has part: feature:676615-676743:-1:exon
so has part: feature:673712-673804:-1:exon
so has part: feature:672337-672523:-1:exon
so has part: feature:664366-664486:-1:exon
so has part: feature:653597-653792:-1:exon
so has part: feature:649756-649906:-1:exon
so has part: feature:645779-645858:-1:exon
so has part: feature:644433-644582:-1:exon
so has part: feature:641623-642293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:690953-691326:-1:exon

position:690953:-1
position: 690953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:688165-688270:-1:exon

position:688165:-1
position: 688165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688270:-1
position: 688270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:682181-682705:-1:exon

position:682181:-1
position: 682181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682705:-1
position: 682705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:679471-679650:-1:exon

position:679471:-1
position: 679471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679650:-1
position: 679650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:677780-677971:-1:exon

position:677780:-1
position: 677780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677971:-1
position: 677971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:676615-676743:-1:exon

position:676615:-1
position: 676615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676743:-1
position: 676743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:673712-673804:-1:exon

position:673712:-1
position: 673712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673804:-1
position: 673804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:672337-672523:-1:exon

position:672337:-1
position: 672337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672523:-1
position: 672523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:664366-664486:-1:exon

position:664366:-1
position: 664366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664486:-1
position: 664486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:653597-653792:-1:exon

position:653597:-1
position: 653597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653792:-1
position: 653792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:649756-649906:-1:exon

position:649756:-1
position: 649756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649906:-1
position: 649906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:645779-645858:-1:exon

position:645779:-1
position: 645779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645858:-1
position: 645858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:644433-644582:-1:exon

position:644433:-1
position: 644433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644582:-1
position: 644582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:641623-642293:-1:exon

position:642293:-1
position: 642293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMCO3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: TMCO3
product: transmembrane and coiled-coil domains 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041730878.1
SIO_010081: TMCO3
subclass of: SO_0000673
so part of: TMCO3
location: complement(join(641623..642293,644433..644582,645779..645858,649756..649906,653597..653792,664366..664486,672337..672523,673712..673804,676615..676743,677780..677971,679471..679650,682181..682705,688165..688273,690953..691326))
location: region:641623-691326:-1
so has part: feature:690953-691326:-1:exon
so has part: feature:688165-688273:-1:exon
so has part: feature:682181-682705:-1:exon
so has part: feature:679471-679650:-1:exon
so has part: feature:677780-677971:-1:exon
so has part: feature:676615-676743:-1:exon
so has part: feature:673712-673804:-1:exon
so has part: feature:672337-672523:-1:exon
so has part: feature:664366-664486:-1:exon
so has part: feature:653597-653792:-1:exon
so has part: feature:649756-649906:-1:exon
so has part: feature:645779-645858:-1:exon
so has part: feature:644433-644582:-1:exon
so has part: feature:641623-642293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:690953-691326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688165-688273:-1:exon

position:688273:-1
position: 688273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:682181-682705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:679471-679650:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:677780-677971:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:676615-676743:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673712-673804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:672337-672523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:664366-664486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:653597-653792:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:649756-649906:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:645779-645858:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:644433-644582:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:641623-642293:-1:exon

TMCO3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: TMCO3
product: transmembrane and coiled-coil domains 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041730879.1
SIO_010081: TMCO3
subclass of: SO_0000673
so part of: TMCO3
location: complement(join(641623..642293,644433..644582,645779..645858,649756..649906,653597..653792,664366..664486,672337..672523,673712..673804,676615..676743,677780..677971,679471..679650,682181..682705,683634..683740,688165..688273,690953..691326))
location: region:641623-691326:-1
so has part: feature:690953-691326:-1:exon
so has part: feature:688165-688273:-1:exon
so has part: feature:683634-683740:-1:exon
so has part: feature:682181-682705:-1:exon
so has part: feature:679471-679650:-1:exon
so has part: feature:677780-677971:-1:exon
so has part: feature:676615-676743:-1:exon
so has part: feature:673712-673804:-1:exon
so has part: feature:672337-672523:-1:exon
so has part: feature:664366-664486:-1:exon
so has part: feature:653597-653792:-1:exon
so has part: feature:649756-649906:-1:exon
so has part: feature:645779-645858:-1:exon
so has part: feature:644433-644582:-1:exon
so has part: feature:641623-642293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:690953-691326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688165-688273:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683634-683740:-1:exon

position:683634:-1
position: 683634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683740:-1
position: 683740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:682181-682705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:679471-679650:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:677780-677971:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:676615-676743:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:673712-673804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:672337-672523:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:664366-664486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:653597-653792:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:649756-649906:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:645779-645858:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:644433-644582:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:641623-642293:-1:exon

TMCO3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: TMCO3
product: transmembrane and coiled-coil domains 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041730881.1
SIO_010081: TMCO3
subclass of: SO_0000673
so part of: TMCO3
location: complement(join(641623..642293,644433..644582,645779..645858,649756..649906,653597..653792,664366..664483,672337..672523,673712..673804,676615..676743,677780..677971,679471..679650,682181..682705,688165..688273,690953..691325))
location: region:641623-691325:-1
so has part: feature:690953-691325:-1:exon
so has part: feature:688165-688273:-1:exon
so has part: feature:682181-682705:-1:exon
so has part: feature:679471-679650:-1:exon
so has part: feature:677780-677971:-1:exon
so has part: feature:676615-676743:-1:exon
so has part: feature:673712-673804:-1:exon
so has part: feature:672337-672523:-1:exon
so has part: feature:664366-664483:-1:exon
so has part: feature:653597-653792:-1:exon
so has part: feature:649756-649906:-1:exon
so has part: feature:645779-645858:-1:exon
so has part: feature:644433-644582:-1:exon
so has part: feature:641623-642293:-1:exon

position:691325:-1
position: 691325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:690953-691325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688165-688273:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:682181-682705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:679471-679650:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:677780-677971:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:676615-676743:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673712-673804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:672337-672523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:664366-664483:-1:exon

position:664483:-1
position: 664483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:653597-653792:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:649756-649906:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:645779-645858:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:644433-644582:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:641623-642293:-1:exon

TMCO3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: TMCO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domain-containing protein 3 isoform X2
translation: MKVLEKNYFWMLLPLLRLIADAAEHEEVAKHAIKLHRGRGAAIAQRKQWVLDSCRKLSGLLRQKAVVLNKLNSAIRAVEKDVSLSDEEKLFQVHTFEIFQKELNESENSVFQAIYGLQRALQGDYRDVVNMKESSRQRLEALREAAIKEETEYVELLAAEKHQVEALKNMQHQNKSLSILDEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNFTKREVEDDLGLSMLIDSQNNRYILTKPRDATIPRADHHFLKDIVTIGMLSLPCGWLCTTIGLPTMFGYIICGVLLGPSGLNSIKSVVQVETLGEVGVFFTLFLVGLEFSPERLRKVWKIALQGPCYMTLLMIAFGLLWGHLLQIRPTQSVFISTCLSLSSTPLVSRFLMGSARGEKEGDIDYSAVLLGMLVVQDVQLGLFIAGMPTLIQAGAGTYSSIIMETLRILALVGQILFSLAAAFLLCLVIKTYLIGPYYRKLHVESKGNKEILILGISAFIFLMLMVTELLDISMELGCFLAGALISSQGHMVTEEVMSYIEPIRDFLVIIFFASIGLHVFPTFVVYELTVLMVLTLSVVIMKFALAALVLSLLLPKSSQYVKWIVAAGLAQVSELSFVLGSRARRAGIISREVYLLILSVTTLSLLLAPVLWRAAIMRCVPRPERRLSL
SIO_010081: TMCO3
subclass of: SO_0000673
so part of: TMCO3
location: complement(join(642180..642293,644433..644582,645779..645858,649756..649906,653597..653792,664366..664483,672337..672523,673712..673804,676615..676743,677780..677971,679471..679650,682181..682624))
location: region:642180-682624:-1
so has part: feature:682181-682624:-1:exon
so has part: feature:679471-679650:-1:exon
so has part: feature:677780-677971:-1:exon
so has part: feature:676615-676743:-1:exon
so has part: feature:673712-673804:-1:exon
so has part: feature:672337-672523:-1:exon
so has part: feature:664366-664483:-1:exon
so has part: feature:653597-653792:-1:exon
so has part: feature:649756-649906:-1:exon
so has part: feature:645779-645858:-1:exon
so has part: feature:644433-644582:-1:exon
so has part: feature:642180-642293:-1:exon

XP_041586815.1
type: Protein
SIO_000068: ncbiprotein

position:642180:-1
position: 642180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682624:-1
position: 682624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:682181-682624:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:679471-679650:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677780-677971:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676615-676743:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:673712-673804:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:672337-672523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:664366-664483:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653597-653792:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:649756-649906:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:645779-645858:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:644433-644582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:642180-642293:-1:exon

TMCO3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: TMCO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domain-containing protein 3 isoform X1
translation: MKVLEKNYFWMLLPLLRLIADAAEHEEVAKHAIKLHRGRGAAIAQRKQWVLDSCRKLSGLLRQKAVVLNKLNSAIRAVEKDVSLSDEEKLFQVHTFEIFQKELNESENSVFQAIYGLQRALQGDYRDVVNMKESSRQRLEALREAAIKEETEYVELLAAEKHQVEALKNMQHQNKSLSILDEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNFTKREVEDDLGLSMLIDSQNNRYILTKPRDATIPRADHHFLKDIVTIGMLSLPCGWLCTTIGLPTMFGYIICGVLLGPSGLNSIKSVVQVETLGEVGVFFTLFLVGLEFSPERLRKVWKIALQGPCYMTLLMIAFGLLWGHLLQIRPTQSVFISTCLSLSSTPLVSRFLMGSARGEKEAGDIDYSAVLLGMLVVQDVQLGLFIAGMPTLIQAGAGTYSSIIMETLRILALVGQILFSLAAAFLLCLVIKTYLIGPYYRKLHVESKGNKEILILGISAFIFLMLMVTELLDISMELGCFLAGALISSQGHMVTEEVMSYIEPIRDFLVIIFFASIGLHVFPTFVVYELTVLMVLTLSVVIMKFALAALVLSLLLPKSSQYVKWIVAAGLAQVSELSFVLGSRARRAGIISREVYLLILSVTTLSLLLAPVLWRAAIMRCVPRPERRLSL
SIO_010081: TMCO3
subclass of: SO_0000673
so part of: TMCO3
location: complement(join(642180..642293,644433..644582,645779..645858,649756..649906,653597..653792,664366..664486,672337..672523,673712..673804,676615..676743,677780..677971,679471..679650,682181..682624))
location: region:642180-682624:-1
so has part: feature:682181-682624:-1:exon
so has part: feature:679471-679650:-1:exon
so has part: feature:677780-677971:-1:exon
so has part: feature:676615-676743:-1:exon
so has part: feature:673712-673804:-1:exon
so has part: feature:672337-672523:-1:exon
so has part: feature:664366-664486:-1:exon
so has part: feature:653597-653792:-1:exon
so has part: feature:649756-649906:-1:exon
so has part: feature:645779-645858:-1:exon
so has part: feature:644433-644582:-1:exon
so has part: feature:642180-642293:-1:exon

XP_041586812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:682181-682624:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:679471-679650:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677780-677971:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676615-676743:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:673712-673804:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:672337-672523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:664366-664486:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653597-653792:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:649756-649906:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:645779-645858:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:644433-644582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:642180-642293:-1:exon

TMCO3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: TMCO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domain-containing protein 3 isoform X1
translation: MKVLEKNYFWMLLPLLRLIADAAEHEEVAKHAIKLHRGRGAAIAQRKQWVLDSCRKLSGLLRQKAVVLNKLNSAIRAVEKDVSLSDEEKLFQVHTFEIFQKELNESENSVFQAIYGLQRALQGDYRDVVNMKESSRQRLEALREAAIKEETEYVELLAAEKHQVEALKNMQHQNKSLSILDEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNFTKREVEDDLGLSMLIDSQNNRYILTKPRDATIPRADHHFLKDIVTIGMLSLPCGWLCTTIGLPTMFGYIICGVLLGPSGLNSIKSVVQVETLGEVGVFFTLFLVGLEFSPERLRKVWKIALQGPCYMTLLMIAFGLLWGHLLQIRPTQSVFISTCLSLSSTPLVSRFLMGSARGEKEAGDIDYSAVLLGMLVVQDVQLGLFIAGMPTLIQAGAGTYSSIIMETLRILALVGQILFSLAAAFLLCLVIKTYLIGPYYRKLHVESKGNKEILILGISAFIFLMLMVTELLDISMELGCFLAGALISSQGHMVTEEVMSYIEPIRDFLVIIFFASIGLHVFPTFVVYELTVLMVLTLSVVIMKFALAALVLSLLLPKSSQYVKWIVAAGLAQVSELSFVLGSRARRAGIISREVYLLILSVTTLSLLLAPVLWRAAIMRCVPRPERRLSL
SIO_010081: TMCO3
subclass of: SO_0000673
so part of: TMCO3
location: complement(join(642180..642293,644433..644582,645779..645858,649756..649906,653597..653792,664366..664486,672337..672523,673712..673804,676615..676743,677780..677971,679471..679650,682181..682624))
location: region:642180-682624:-1
so has part: feature:682181-682624:-1:exon
so has part: feature:679471-679650:-1:exon
so has part: feature:677780-677971:-1:exon
so has part: feature:676615-676743:-1:exon
so has part: feature:673712-673804:-1:exon
so has part: feature:672337-672523:-1:exon
so has part: feature:664366-664486:-1:exon
so has part: feature:653597-653792:-1:exon
so has part: feature:649756-649906:-1:exon
so has part: feature:645779-645858:-1:exon
so has part: feature:644433-644582:-1:exon
so has part: feature:642180-642293:-1:exon

XP_041586813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:682181-682624:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:679471-679650:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677780-677971:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676615-676743:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:673712-673804:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:672337-672523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:664366-664486:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653597-653792:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:649756-649906:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:645779-645858:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:644433-644582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:642180-642293:-1:exon

TMCO3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: TMCO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domain-containing protein 3 isoform X1
translation: MKVLEKNYFWMLLPLLRLIADAAEHEEVAKHAIKLHRGRGAAIAQRKQWVLDSCRKLSGLLRQKAVVLNKLNSAIRAVEKDVSLSDEEKLFQVHTFEIFQKELNESENSVFQAIYGLQRALQGDYRDVVNMKESSRQRLEALREAAIKEETEYVELLAAEKHQVEALKNMQHQNKSLSILDEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNFTKREVEDDLGLSMLIDSQNNRYILTKPRDATIPRADHHFLKDIVTIGMLSLPCGWLCTTIGLPTMFGYIICGVLLGPSGLNSIKSVVQVETLGEVGVFFTLFLVGLEFSPERLRKVWKIALQGPCYMTLLMIAFGLLWGHLLQIRPTQSVFISTCLSLSSTPLVSRFLMGSARGEKEAGDIDYSAVLLGMLVVQDVQLGLFIAGMPTLIQAGAGTYSSIIMETLRILALVGQILFSLAAAFLLCLVIKTYLIGPYYRKLHVESKGNKEILILGISAFIFLMLMVTELLDISMELGCFLAGALISSQGHMVTEEVMSYIEPIRDFLVIIFFASIGLHVFPTFVVYELTVLMVLTLSVVIMKFALAALVLSLLLPKSSQYVKWIVAAGLAQVSELSFVLGSRARRAGIISREVYLLILSVTTLSLLLAPVLWRAAIMRCVPRPERRLSL
SIO_010081: TMCO3
subclass of: SO_0000673
so part of: TMCO3
location: complement(join(642180..642293,644433..644582,645779..645858,649756..649906,653597..653792,664366..664486,672337..672523,673712..673804,676615..676743,677780..677971,679471..679650,682181..682624))
location: region:642180-682624:-1
so has part: feature:682181-682624:-1:exon
so has part: feature:679471-679650:-1:exon
so has part: feature:677780-677971:-1:exon
so has part: feature:676615-676743:-1:exon
so has part: feature:673712-673804:-1:exon
so has part: feature:672337-672523:-1:exon
so has part: feature:664366-664486:-1:exon
so has part: feature:653597-653792:-1:exon
so has part: feature:649756-649906:-1:exon
so has part: feature:645779-645858:-1:exon
so has part: feature:644433-644582:-1:exon
so has part: feature:642180-642293:-1:exon

XP_041586814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:682181-682624:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:679471-679650:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677780-677971:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676615-676743:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:673712-673804:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:672337-672523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:664366-664486:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653597-653792:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:649756-649906:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:645779-645858:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:644433-644582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:642180-642293:-1:exon

LOC121476799
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121476799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 664494..666987
location: region:664494-666987:1
so has part: feature:664494-666987:1:exon
subclass of: SO_0000010

121476799
type: Gene
SIO_000068: ncbigene

position:664494:1
position: 664494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666987:1
position: 666987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664494-666987:1:exon

LOC121476799
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LOC121476799
product: small ubiquitin-related modifier 2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041730882.1
SIO_010081: LOC121476799
subclass of: SO_0000673
so part of: LOC121476799
location: 664494..666987
location: region:664494-666987:1
so has part: feature:664494-666987:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:664494-666987:1:exon

LOC121476799
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LOC121476799
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:665825..665827,aa:OTHER)
product: LOW QUALITY PROTEIN: small ubiquitin-related modifier 2-like
translation: MADEKPKEGVKTENNDHINLKMAGQDGSVVQFKIKRHTXYMLMKAYCEXQGLSMRQIRFRFDGQPMNETDTLAQLEMEDEDTIDVFQQQTGGVY
SIO_010081: LOC121476799
subclass of: SO_0000673
so part of: LOC121476799
location: 665683..665965
location: region:665683-665965:1
so has part: feature:665683-665965:1:exon

XP_041586816.1
type: Protein
SIO_000068: ncbiprotein

position:665683:1
position: 665683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665965:1
position: 665965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665683-665965:1:exon

DCUN1D2
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: DCUN1D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <697997..725333
location: region:697997-725333:1
so has part: feature:697997-725333:1:exon
subclass of: SO_0000010

121476800
type: Gene
SIO_000068: ncbigene

position:697997:1
position: 697997
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:725333:1
position: 725333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697997-725333:1:exon

DCUN1D2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: DCUN1D2
product: defective in cullin neddylation 1 domain containing 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041730883.1
SIO_010081: DCUN1D2
subclass of: SO_0000673
so part of: DCUN1D2
location: join(<697997..698259,701309..701477,708587..708717,720568..720650,722306..722402,723582..725333)
location: region:697997-725333:1
so has part: feature:697997-698259:1:exon
so has part: feature:701309-701477:1:exon
so has part: feature:708587-708717:1:exon
so has part: feature:720568-720650:1:exon
so has part: feature:722306-722402:1:exon
so has part: feature:723582-725333:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:697997-698259:1:exon

position:698259:1
position: 698259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:701309-701477:1:exon

position:701309:1
position: 701309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701477:1
position: 701477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:708587-708717:1:exon

position:708587:1
position: 708587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:708717:1
position: 708717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:720568-720650:1:exon

position:720568:1
position: 720568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720650:1
position: 720650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:722306-722402:1:exon

position:722306:1
position: 722306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722402:1
position: 722402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:723582-725333:1:exon

position:723582:1
position: 723582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DCUN1D2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: DCUN1D2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: DCN1-like protein 2
translation: EAPDQWCWLSCSYCDQSVCIGHFRTGPQLLVFPRAGHRSALCCVTQDEWKLGVATDRFLRKLDLFLKEPMRDAVDKKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLSLDPASVSVLVIAWKFKAATQCEFSKKEFIGGMTELGCDSTEKLRALLPRLEQELKDTVKFKDFYQFTFSFAKNPGQKGLDLEMAVAYWNLVLSGRFKFLDLWNTFLLEHHKRSIPRDTWNLLLDFGNMIADDMSNYDEEGAWPVLIDDFVEYARPVVTGSKRSPF
SIO_010081: DCUN1D2
subclass of: SO_0000673
so part of: DCUN1D2
location: join(<697997..698259,701309..701477,708587..708717,720568..720650,722306..722402,723582..723661)
location: region:697997-723661:1
so has part: feature:697997-698259:1:exon
so has part: feature:701309-701477:1:exon
so has part: feature:708587-708717:1:exon
so has part: feature:720568-720650:1:exon
so has part: feature:722306-722402:1:exon
so has part: feature:723582-723661:1:exon

XP_041586817.1
type: Protein
SIO_000068: ncbiprotein

position:723661:1
position: 723661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697997-698259:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701309-701477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708587-708717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:720568-720650:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722306-722402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:723582-723661:1:exon

ADPRHL1
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: ADPRHL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 727491..744898
location: region:727491-744898:1
so has part: feature:727491-744898:1:exon
subclass of: SO_0000010

121476950
type: Gene
SIO_000068: ncbigene

position:727491:1
position: 727491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744898:1
position: 744898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727491-744898:1:exon

ADPRHL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ADPRHL1
product: ADP-ribosylhydrolase like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041731087.1
SIO_010081: ADPRHL1
subclass of: SO_0000673
so part of: ADPRHL1
location: join(727491..727829,731920..732084,737129..737254,738971..739111,741828..741955,743240..743372,744021..744898)
location: region:727491-744898:1
so has part: feature:727491-727829:1:exon
so has part: feature:731920-732084:1:exon
so has part: feature:737129-737254:1:exon
so has part: feature:738971-739111:1:exon
so has part: feature:741828-741955:1:exon
so has part: feature:743240-743372:1:exon
so has part: feature:744021-744898:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:727491-727829:1:exon

position:727829:1
position: 727829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:731920-732084:1:exon

position:731920:1
position: 731920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732084:1
position: 732084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:737129-737254:1:exon

position:737129:1
position: 737129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737254:1
position: 737254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:738971-739111:1:exon

position:738971:1
position: 738971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739111:1
position: 739111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:741828-741955:1:exon

position:741828:1
position: 741828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741955:1
position: 741955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:743240-743372:1:exon

position:743240:1
position: 743240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743372:1
position: 743372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:744021-744898:1:exon

position:744021:1
position: 744021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADPRHL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ADPRHL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ADP-ribosylarginine hydrolase-like protein 1
translation: MEKFKAAMLLGAVGDALGHRNARRDSGAPGRKAREELQTGGDLDHPSPEKWWVSDNTIMHLTTAGALTTDYWCLDDLYREMVKRYVEVLEKLPEHWADPATLEGCSQLKPDNYLLAWHTPFNEKGSGFGAATKAMCIGMRYWKPERLETLVEVSIECGRMTHNHPTGFLGSLCTALFASYAAQGKPLEQWGRDMMRTVPLAEEYCKKTIRHLSEYQEHWFYFEAKWQFYLEERKLSEDTGSKAIFPDHYDAEERDKAYRKWSSEGRGGRRGHDAPMIAYDALLGAGDDWTELCHRAMCHGGESGATGTIAGCLFGLLHGLDTVPAGLYQDLEHKEELVQLGEALYRLSTEEK
SIO_010081: ADPRHL1
subclass of: SO_0000673
so part of: ADPRHL1
location: join(727622..727829,731920..732084,737129..737254,738971..739111,741828..741955,743240..743372,744021..744178)
location: region:727622-744178:1
so has part: feature:727622-727829:1:exon
so has part: feature:731920-732084:1:exon
so has part: feature:737129-737254:1:exon
so has part: feature:738971-739111:1:exon
so has part: feature:741828-741955:1:exon
so has part: feature:743240-743372:1:exon
so has part: feature:744021-744178:1:exon

XP_041587021.1
type: Protein
SIO_000068: ncbiprotein

position:727622:1
position: 727622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744178:1
position: 744178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727622-727829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:731920-732084:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:737129-737254:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:738971-739111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741828-741955:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:743240-743372:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:744021-744178:1:exon

LOC121477173
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121477173
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 748666..755988
location: region:748666-755988:1
so has part: feature:748666-755988:1:exon
subclass of: SO_0000010

121477173
type: Gene
SIO_000068: ncbigene

position:748666:1
position: 748666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755988:1
position: 755988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:748666-755988:1:exon

LOC121477173
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LOC121477173
product: nascent polypeptide-associated complex subunit alpha, muscle-specific form
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041731402.1
SIO_010081: LOC121477173
subclass of: SO_0000673
so part of: LOC121477173
location: join(748666..748695,749650..749804,752034..755988)
location: region:748666-755988:1
so has part: feature:748666-748695:1:exon
so has part: feature:749650-749804:1:exon
so has part: feature:752034-755988:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:748666-748695:1:exon

position:748695:1
position: 748695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:749650-749804:1:exon

position:749650:1
position: 749650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749804:1
position: 749804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:752034-755988:1:exon

position:752034:1
position: 752034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121477173
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LOC121477173
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nascent polypeptide-associated complex subunit alpha, muscle-specific form
translation: MASAAGAEYKHQPPAQSHHELSRCCQAGPHTRYGAQCLDSVWRCSALQRWVSSRRLGAAWLGSKRSKICESKKPVDTHTLRKKVSSMTCEPAVRAVLGSLLLYVTELQARPPEPAPAMRAEGTRSRVGRPSETQNTQRRPTCFQLLQARFMGTGREPRLKKTQEVGRLIFKDKQGPSRSLVTTTINKLLEKAREGASCPTRDRETLHSQKPRQGSPTRKGTVKNILKIFLAAEQKNVHEEPNAAKGPPPTPAPKRGSVLSRLREKFEQSGCLCSEAGVLPLRKDGRKKKNLQKRRLHRPETRVLCTATMTSTCIRTPLARFLACTAEPRLALNIATVVCRPRSWLSHCAKIRHSDRGRVPEGSKTAGQGQPAGGAPADRLHMALLGGEPAPCPVSPRGREPMVPLLQPACSGQAGAVGGCRMGEPPTGDATQYTWEPGEAGAGAGTAPEVALMVCSSEDETEGVTLGSEGNPLFAVQETFPEQKTVGHIPPLLAPVVQALWRTQSAMEPPQVTVMRPVVYKMPPSPATLPKTMQPPQVTTTRPDTCKVQPPPATLPKTMQPPQVTTTRPDTCKVQPPPATLPKSTEPPQVTATRPDTCKVQPPPATLPKSTEPPQVTATRSDTCKVQPPPATLPKTMQPPQVTTTQPDTCKVQPPPATLPKTMQPPQVTTTQPDTCKVQPPPATLPKTMQSPQVTTTRPDTCKVQPPPATLPKTAEPPQVTIPSARGATSVGQDLLTAAPQKCPTQGKETTHSFGAPKELQHPEGMAGEAMSELACEKHQLPMSHDKLIHGGDAPWHHPTASENQRSGDSPLAPGHEQGLPPDRGRPAGISALLEAPLSDRTRSDSPTSMDKKVLCGRELRGPPLRYSARPGPQAAGSTGPSLGGYRPASFGKCLKPSTEIPRLVVATGAMESHGTPVPGNTVNAVNSEAREQNPVHQGESLAAGALAQATSQPHSSVLAGSWRHLLGAAESGACGGSGHHQAETPESPAAVPLEAAGTPHKNVVTEGEASIVAGDRGAAAAHRSPWGADMTPGPGWAHPTPQSRGAVGSPPLPPENQQAQEDKHIMPKIQVLPRAGAPCRPPSPQAAAEGQRAGRAPPKCPNVQAQPLPASIPRAGVWEGAKVGDRRRPWSGLGMLEDGAMGPTRLDGAPKEGAALWGQKAGSHAAEEGQMWPWRVEGGRGTKVGARGVETGPHHTEKGPEHAREQQAQRAEHLPGGPGAQAGENQAPPPPESLGHPALAQASRMSPHIWAGPLHNSSEAVAVADVSGRSQGAPSASQGGPGAPHEVGRNQRSSSPKPVLGFTVPAPRPGGCQMPRAPTEEGSPHTMEAEKGALAHEHRTSLARFAKYRAQSFGDQRSFDLSFRPTTIRASDTFELPK
SIO_010081: LOC121477173
subclass of: SO_0000673
so part of: LOC121477173
location: join(748666..748695,749650..749804,752034..755988)
location: region:748666-755988:1
so has part: feature:748666-748695:1:exon
so has part: feature:749650-749804:1:exon
so has part: feature:752034-755988:1:exon

XP_041587336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:748666-748695:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:749650-749804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:752034-755988:1:exon

LOC121477115
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121477115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(763232..764402)
location: region:763232-764402:-1
so has part: feature:763232-764402:-1:exon
subclass of: SO_0000011

121477115
type: Gene
SIO_000068: ncbigene

position:763232:-1
position: 763232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764402:-1
position: 764402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:763232-764402:-1:exon

LOC121477115
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: lncRNA
gene: LOC121477115
product: uncharacterized LOC121477115
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005984099.1
SIO_010081: LOC121477115
subclass of: SO_0000673
so part of: LOC121477115
location: complement(join(763232..763974,764058..764147,764358..764402))
location: region:763232-764402:-1
so has part: feature:764358-764402:-1:exon
so has part: feature:764058-764147:-1:exon
so has part: feature:763232-763974:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:764358-764402:-1:exon

position:764358:-1
position: 764358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:764058-764147:-1:exon

position:764058:-1
position: 764058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764147:-1
position: 764147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:763232-763974:-1:exon

position:763974:-1
position: 763974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRTP1
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: GRTP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 764498..782719
location: region:764498-782719:1
so has part: feature:764498-782719:1:exon
subclass of: SO_0000010

121476973
type: Gene
SIO_000068: ncbigene

position:764498:1
position: 764498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782719:1
position: 782719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:764498-782719:1:exon

GRTP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: GRTP1
product: growth hormone regulated TBC protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041731130.1
SIO_010081: GRTP1
subclass of: SO_0000673
so part of: GRTP1
location: join(764498..764662,764809..764960,769502..769660,772101..772225,773832..773928,779338..779510,779589..779774,781932..782719)
location: region:764498-782719:1
so has part: feature:764498-764662:1:exon
so has part: feature:764809-764960:1:exon
so has part: feature:769502-769660:1:exon
so has part: feature:772101-772225:1:exon
so has part: feature:773832-773928:1:exon
so has part: feature:779338-779510:1:exon
so has part: feature:779589-779774:1:exon
so has part: feature:781932-782719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:764498-764662:1:exon

position:764662:1
position: 764662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:764809-764960:1:exon

position:764809:1
position: 764809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764960:1
position: 764960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:769502-769660:1:exon

position:769502:1
position: 769502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769660:1
position: 769660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:772101-772225:1:exon

position:772101:1
position: 772101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772225:1
position: 772225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:773832-773928:1:exon

position:773832:1
position: 773832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773928:1
position: 773928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:779338-779510:1:exon

position:779338:1
position: 779338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779510:1
position: 779510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:779589-779774:1:exon

position:779589:1
position: 779589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779774:1
position: 779774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:781932-782719:1:exon

position:781932:1
position: 781932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRTP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: GRTP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth hormone-regulated TBC protein 1
translation: MEPEGRARDRVPRIDPYGFERPEDFDYAAYEEFLSTYLVILTRRAIKWSKLLKGSSSVQRSGTVKRYIRKGVPLEHRARVWMGVSGAQAQMDQNPGYYHRLLQGERSDRLEEAIRTDMNRTFPDNVKFRKNADPCLQKTLYNILLAYGRHNEGVGYCQGMNFIAGYLLLVTKSEEESFWLLDALLGRILPDYYGPAMLGLKTDQEVLGELVKTKLPAVAALMDGHGVLWTLVVSRWFICLFVDILPVETVFRIWDCLFNEGSKIIFRVALTLIKQHQGFILEATSVVDICERFKEITRGSLVTDCHTFMQKIFSEPGSLSMATITRLRESCRAKLLAQG
SIO_010081: GRTP1
subclass of: SO_0000673
so part of: GRTP1
location: join(764625..764662,764809..764960,769502..769660,772101..772225,773832..773928,779338..779510,779589..779774,781932..782021)
location: region:764625-782021:1
so has part: feature:764625-764662:1:exon
so has part: feature:764809-764960:1:exon
so has part: feature:769502-769660:1:exon
so has part: feature:772101-772225:1:exon
so has part: feature:773832-773928:1:exon
so has part: feature:779338-779510:1:exon
so has part: feature:779589-779774:1:exon
so has part: feature:781932-782021:1:exon

XP_041587064.1
type: Protein
SIO_000068: ncbiprotein

position:764625:1
position: 764625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782021:1
position: 782021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:764625-764662:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:764809-764960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:769502-769660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:772101-772225:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:773832-773928:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:779338-779510:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:779589-779774:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:781932-782021:1:exon

LAMP1
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LAMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(783630..801131)
location: region:783630-801131:-1
so has part: feature:783630-801131:-1:exon
subclass of: SO_0000010

121476972
type: Gene
SIO_000068: ncbigene

position:783630:-1
position: 783630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801131:-1
position: 801131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783630-801131:-1:exon

LAMP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LAMP1
product: lysosomal associated membrane protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041731129.1
SIO_010081: LAMP1
subclass of: SO_0000673
so part of: LAMP1
location: complement(join(783630..784620,784997..785167,785238..785304,786158..786283,786787..786974,792162..792320,792418..792634,794645..794763,800883..801131))
location: region:783630-801131:-1
so has part: feature:800883-801131:-1:exon
so has part: feature:794645-794763:-1:exon
so has part: feature:792418-792634:-1:exon
so has part: feature:792162-792320:-1:exon
so has part: feature:786787-786974:-1:exon
so has part: feature:786158-786283:-1:exon
so has part: feature:785238-785304:-1:exon
so has part: feature:784997-785167:-1:exon
so has part: feature:783630-784620:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:800883-801131:-1:exon

position:800883:-1
position: 800883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:794645-794763:-1:exon

position:794645:-1
position: 794645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794763:-1
position: 794763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:792418-792634:-1:exon

position:792418:-1
position: 792418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792634:-1
position: 792634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:792162-792320:-1:exon

position:792162:-1
position: 792162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792320:-1
position: 792320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:786787-786974:-1:exon

position:786787:-1
position: 786787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786974:-1
position: 786974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:786158-786283:-1:exon

position:786158:-1
position: 786158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786283:-1
position: 786283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:785238-785304:-1:exon

position:785238:-1
position: 785238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785304:-1
position: 785304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:784997-785167:-1:exon

position:784997:-1
position: 784997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785167:-1
position: 785167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:783630-784620:-1:exon

position:784620:-1
position: 784620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LAMP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LAMP1
product: lysosomal associated membrane protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041731128.1
SIO_010081: LAMP1
subclass of: SO_0000673
so part of: LAMP1
location: complement(join(783630..784620,784997..785167,785238..785304,786158..786283,786787..786974,792162..792320,792418..792634,794645..794766,800883..801130))
location: region:783630-801130:-1
so has part: feature:800883-801130:-1:exon
so has part: feature:794645-794766:-1:exon
so has part: feature:792418-792634:-1:exon
so has part: feature:792162-792320:-1:exon
so has part: feature:786787-786974:-1:exon
so has part: feature:786158-786283:-1:exon
so has part: feature:785238-785304:-1:exon
so has part: feature:784997-785167:-1:exon
so has part: feature:783630-784620:-1:exon

position:801130:-1
position: 801130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:800883-801130:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:794645-794766:-1:exon

position:794766:-1
position: 794766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:792418-792634:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792162-792320:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:786787-786974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786158-786283:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:785238-785304:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:784997-785167:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:783630-784620:-1:exon

LAMP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LAMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosome-associated membrane glycoprotein 1 isoform X2
translation: MAAFGGARPRPLLLLLLLGLVHGAAAVFVVKDANGTACIMANFSAAFLASYETRSGPKNVTFDLPSDAVVLNSSSCGKENTSDPSLMIAFGKGHGLTLNFTRNATRYSVQLMSFIYNLSDTQIFPNASSKETKTVESATDIRADINKKYRCVSNTQIHMHNVTVTFRDVTIQAYLANSNFSKEETRCEQDGPFPTTAPPPPPRPSPSPAPESPSVHKYNVSGANGTCLLASMGLQLNVTYKKKDNTTMVKVVSINPNKTTAGGSCGAQLVTLELRSESVALLVFQFGMNASTSRFFLQGIQLNMTLPDARDPTFKAGNNSLRALQATIGNSYKCNAGEHVQVTEAFSVNIIKVWVQAFQVQGDKFGSVEECQLDENSMLIPIAVGGALAGLVLIVLIAYLIGRKRSHAGYQTI
SIO_010081: LAMP1
subclass of: SO_0000673
so part of: LAMP1
location: complement(join(784481..784620,784997..785167,785238..785304,786158..786283,786787..786974,792162..792320,792418..792634,794645..794763,800883..800937))
location: region:784481-800937:-1
so has part: feature:800883-800937:-1:exon
so has part: feature:794645-794763:-1:exon
so has part: feature:792418-792634:-1:exon
so has part: feature:792162-792320:-1:exon
so has part: feature:786787-786974:-1:exon
so has part: feature:786158-786283:-1:exon
so has part: feature:785238-785304:-1:exon
so has part: feature:784997-785167:-1:exon
so has part: feature:784481-784620:-1:exon

XP_041587063.1
type: Protein
SIO_000068: ncbiprotein

position:784481:-1
position: 784481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800937:-1
position: 800937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:800883-800937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:794645-794763:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:792418-792634:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792162-792320:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:786787-786974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786158-786283:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:785238-785304:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:784997-785167:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:784481-784620:-1:exon

LAMP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LAMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosome-associated membrane glycoprotein 1 isoform X1
translation: MAAFGGARPRPLLLLLLLAGLVHGAAAVFVVKDANGTACIMANFSAAFLASYETRSGPKNVTFDLPSDAVVLNSSSCGKENTSDPSLMIAFGKGHGLTLNFTRNATRYSVQLMSFIYNLSDTQIFPNASSKETKTVESATDIRADINKKYRCVSNTQIHMHNVTVTFRDVTIQAYLANSNFSKEETRCEQDGPFPTTAPPPPPRPSPSPAPESPSVHKYNVSGANGTCLLASMGLQLNVTYKKKDNTTMVKVVSINPNKTTAGGSCGAQLVTLELRSESVALLVFQFGMNASTSRFFLQGIQLNMTLPDARDPTFKAGNNSLRALQATIGNSYKCNAGEHVQVTEAFSVNIIKVWVQAFQVQGDKFGSVEECQLDENSMLIPIAVGGALAGLVLIVLIAYLIGRKRSHAGYQTI
SIO_010081: LAMP1
subclass of: SO_0000673
so part of: LAMP1
location: complement(join(784481..784620,784997..785167,785238..785304,786158..786283,786787..786974,792162..792320,792418..792634,794645..794766,800883..800937))
location: region:784481-800937:-1
so has part: feature:800883-800937:-1:exon
so has part: feature:794645-794766:-1:exon
so has part: feature:792418-792634:-1:exon
so has part: feature:792162-792320:-1:exon
so has part: feature:786787-786974:-1:exon
so has part: feature:786158-786283:-1:exon
so has part: feature:785238-785304:-1:exon
so has part: feature:784997-785167:-1:exon
so has part: feature:784481-784620:-1:exon

XP_041587062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:800883-800937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:794645-794766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:792418-792634:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792162-792320:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:786787-786974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786158-786283:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:785238-785304:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:784997-785167:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:784481-784620:-1:exon

CUL4A
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: CUL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(811359..854589)
location: region:811359-854589:-1
so has part: feature:811359-854589:-1:exon
subclass of: SO_0000010

121476822
type: Gene
SIO_000068: ncbigene

position:811359:-1
position: 811359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854589:-1
position: 854589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811359-854589:-1:exon

CUL4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: CUL4A
product: cullin 4A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041730901.1
SIO_010081: CUL4A
subclass of: SO_0000673
so part of: CUL4A
location: complement(join(811359..812633,813934..814086,817741..817913,818101..818206,819863..819976,823589..823696,824009..824094,824180..824290,824582..824686,826125..826317,828567..828685,830622..830689,833861..833943,835121..835210,835625..835787,838304..838377,839574..839643,845072..845175,853315..853430,854036..854589))
location: region:811359-854589:-1
so has part: feature:854036-854589:-1:exon
so has part: feature:853315-853430:-1:exon
so has part: feature:845072-845175:-1:exon
so has part: feature:839574-839643:-1:exon
so has part: feature:838304-838377:-1:exon
so has part: feature:835625-835787:-1:exon
so has part: feature:835121-835210:-1:exon
so has part: feature:833861-833943:-1:exon
so has part: feature:830622-830689:-1:exon
so has part: feature:828567-828685:-1:exon
so has part: feature:826125-826317:-1:exon
so has part: feature:824582-824686:-1:exon
so has part: feature:824180-824290:-1:exon
so has part: feature:824009-824094:-1:exon
so has part: feature:823589-823696:-1:exon
so has part: feature:819863-819976:-1:exon
so has part: feature:818101-818206:-1:exon
so has part: feature:817741-817913:-1:exon
so has part: feature:813934-814086:-1:exon
so has part: feature:811359-812633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:854036-854589:-1:exon

position:854036:-1
position: 854036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:853315-853430:-1:exon

position:853315:-1
position: 853315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853430:-1
position: 853430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:845072-845175:-1:exon

position:845072:-1
position: 845072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845175:-1
position: 845175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:839574-839643:-1:exon

position:839574:-1
position: 839574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839643:-1
position: 839643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:838304-838377:-1:exon

position:838304:-1
position: 838304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838377:-1
position: 838377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:835625-835787:-1:exon

position:835625:-1
position: 835625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835787:-1
position: 835787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:835121-835210:-1:exon

position:835121:-1
position: 835121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835210:-1
position: 835210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:833861-833943:-1:exon

position:833861:-1
position: 833861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833943:-1
position: 833943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:830622-830689:-1:exon

position:830622:-1
position: 830622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830689:-1
position: 830689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:828567-828685:-1:exon

position:828567:-1
position: 828567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828685:-1
position: 828685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:826125-826317:-1:exon

position:826125:-1
position: 826125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826317:-1
position: 826317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:824582-824686:-1:exon

position:824582:-1
position: 824582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824686:-1
position: 824686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:824180-824290:-1:exon

position:824180:-1
position: 824180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824290:-1
position: 824290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:824009-824094:-1:exon

position:824009:-1
position: 824009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824094:-1
position: 824094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:823589-823696:-1:exon

position:823589:-1
position: 823589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823696:-1
position: 823696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:819863-819976:-1:exon

position:819863:-1
position: 819863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819976:-1
position: 819976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:818101-818206:-1:exon

position:818101:-1
position: 818101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818206:-1
position: 818206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:817741-817913:-1:exon

position:817741:-1
position: 817741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817913:-1
position: 817913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:813934-814086:-1:exon

position:813934:-1
position: 813934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814086:-1
position: 814086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:811359-812633:-1:exon

position:812633:-1
position: 812633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CUL4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: CUL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cullin-4A
translation: MADETPRKGALSALVGHTNGLTKPASLAAAAVASKPGGAGGSKKLVIKNFRDRPRLPDNYTQDTWQKLHEAVRAIQSSTSIRYNLEELYQAVENLCSHKVSPTLYKQLRQVCEDHVQAQILQFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRNHIISDKMVQSKSIDGILLLIERERNGEAVDRSLLRSLLSMLSDLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPLIACVEKQLLGEHLTAILHKGLDHLLDENRVPDLTQMYQLFSRVKGGQQILLQHWSEYIKTFGTTIVINPEKDKDMVQDLLDFKDRVDHVIEVCFQRNEKFINLMKESFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELERILDKVMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVQFKQYMQNQSDPGSIDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKARVLVKSPKGKEVEDGDTFMFNGEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA
SIO_010081: CUL4A
subclass of: SO_0000673
so part of: CUL4A
location: complement(join(812538..812633,813934..814086,817741..817913,818101..818206,819863..819976,823589..823696,824009..824094,824180..824290,824582..824686,826125..826317,828567..828685,830622..830689,833861..833943,835121..835210,835625..835787,838304..838377,839574..839643,845072..845175,853315..853430,854036..854189))
location: region:812538-854189:-1
so has part: feature:854036-854189:-1:exon
so has part: feature:853315-853430:-1:exon
so has part: feature:845072-845175:-1:exon
so has part: feature:839574-839643:-1:exon
so has part: feature:838304-838377:-1:exon
so has part: feature:835625-835787:-1:exon
so has part: feature:835121-835210:-1:exon
so has part: feature:833861-833943:-1:exon
so has part: feature:830622-830689:-1:exon
so has part: feature:828567-828685:-1:exon
so has part: feature:826125-826317:-1:exon
so has part: feature:824582-824686:-1:exon
so has part: feature:824180-824290:-1:exon
so has part: feature:824009-824094:-1:exon
so has part: feature:823589-823696:-1:exon
so has part: feature:819863-819976:-1:exon
so has part: feature:818101-818206:-1:exon
so has part: feature:817741-817913:-1:exon
so has part: feature:813934-814086:-1:exon
so has part: feature:812538-812633:-1:exon

XP_041586835.1
type: Protein
SIO_000068: ncbiprotein

position:812538:-1
position: 812538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854189:-1
position: 854189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854036-854189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:853315-853430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:845072-845175:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:839574-839643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:838304-838377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:835625-835787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835121-835210:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:833861-833943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830622-830689:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:828567-828685:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:826125-826317:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:824582-824686:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:824180-824290:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:824009-824094:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:823589-823696:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:819863-819976:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:818101-818206:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:817741-817913:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:813934-814086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:812538-812633:-1:exon

LOC121477219
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121477219
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(819529..819632)
location: region:819529-819632:-1
so has part: feature:819529-819632:-1:exon
subclass of: SO_0000623

121477219
type: Gene
SIO_000068: ncbigene

position:819529:-1
position: 819529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819632:-1
position: 819632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819529-819632:-1:exon

LOC121477219
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: snRNA
gene: LOC121477219
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005984148.1
SIO_010081: LOC121477219
subclass of: SO_0000673
so part of: LOC121477219
location: complement(819529..819632)
location: region:819529-819632:-1
so has part: feature:819529-819632:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:819529-819632:-1:exon

PCID2
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: PCID2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 854481..876010
location: region:854481-876010:1
so has part: feature:854481-876010:1:exon
subclass of: SO_0000010

121476823
type: Gene
SIO_000068: ncbigene

position:854481:1
position: 854481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876010:1
position: 876010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854481-876010:1:exon

PCID2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: PCID2
product: PCI domain containing 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041730906.1
SIO_010081: PCID2
subclass of: SO_0000673
so part of: PCID2
location: join(854481..854611,860013..860102,861617..861690,863434..863499,864373..864414,865330..865384,868026..868129,871281..871356,871879..872020,873107..873207,874106..874179,874309..874434,874940..875063,875356..876010)
location: region:854481-876010:1
so has part: feature:854481-854611:1:exon
so has part: feature:860013-860102:1:exon
so has part: feature:861617-861690:1:exon
so has part: feature:863434-863499:1:exon
so has part: feature:864373-864414:1:exon
so has part: feature:865330-865384:1:exon
so has part: feature:868026-868129:1:exon
so has part: feature:871281-871356:1:exon
so has part: feature:871879-872020:1:exon
so has part: feature:873107-873207:1:exon
so has part: feature:874106-874179:1:exon
so has part: feature:874309-874434:1:exon
so has part: feature:874940-875063:1:exon
so has part: feature:875356-876010:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:854481-854611:1:exon

position:854611:1
position: 854611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:860013-860102:1:exon

position:860013:1
position: 860013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860102:1
position: 860102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:861617-861690:1:exon

position:861617:1
position: 861617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861690:1
position: 861690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:863434-863499:1:exon

position:863434:1
position: 863434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:863499:1
position: 863499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:864373-864414:1:exon

position:864373:1
position: 864373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864414:1
position: 864414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:865330-865384:1:exon

position:865330:1
position: 865330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865384:1
position: 865384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:868026-868129:1:exon

position:868026:1
position: 868026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868129:1
position: 868129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:871281-871356:1:exon

position:871281:1
position: 871281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871356:1
position: 871356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:871879-872020:1:exon

position:871879:1
position: 871879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872020:1
position: 872020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:873107-873207:1:exon

position:873107:1
position: 873107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873207:1
position: 873207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:874106-874179:1:exon

position:874106:1
position: 874106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874179:1
position: 874179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:874309-874434:1:exon

position:874309:1
position: 874309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874434:1
position: 874434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:874940-875063:1:exon

position:874940:1
position: 874940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875063:1
position: 875063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:875356-876010:1:exon

position:875356:1
position: 875356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCID2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: PCID2
product: PCI domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041730902.1
SIO_010081: PCID2
subclass of: SO_0000673
so part of: PCID2
location: join(854618..854754,860013..860102,861617..861690,863434..863499,864373..864414,865330..865384,868026..868129,871281..871356,871879..872020,873107..873207,874106..874179,874309..874434,874940..875063,875356..876010)
location: region:854618-876010:1
so has part: feature:854618-854754:1:exon
so has part: feature:860013-860102:1:exon
so has part: feature:861617-861690:1:exon
so has part: feature:863434-863499:1:exon
so has part: feature:864373-864414:1:exon
so has part: feature:865330-865384:1:exon
so has part: feature:868026-868129:1:exon
so has part: feature:871281-871356:1:exon
so has part: feature:871879-872020:1:exon
so has part: feature:873107-873207:1:exon
so has part: feature:874106-874179:1:exon
so has part: feature:874309-874434:1:exon
so has part: feature:874940-875063:1:exon
so has part: feature:875356-876010:1:exon

position:854618:1
position: 854618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854618-854754:1:exon

position:854754:1
position: 854754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:860013-860102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861617-861690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:863434-863499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:864373-864414:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865330-865384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:868026-868129:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:871281-871356:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:871879-872020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:873107-873207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:874106-874179:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:874309-874434:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:874940-875063:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:875356-876010:1:exon

PCID2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: PCID2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PCI domain-containing protein 2 isoform X1
translation: MAHITINQYLQQVYEAIDTRDGASCAELVSFKHPHVANPRLQMASPEEKCQQVLEPPYDEMFAAHLRCTYAVGNHDFVEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRIFANNADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLIRAIDSSNLKDDYSTAQRVTFRYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTIELLRKYHLMQFAEVTKAVSEGNLLLLNEALTKHETFFIRCGIFLILEKLKIITYRNLFKKVYLLLRTHQLSLDAFLVALKFMQVEDVDIDEVQCILANLIYMGHIKGYISHQHQKLVVSKQNPFPPLSTVC
SIO_010081: PCID2
subclass of: SO_0000673
so part of: PCID2
location: join(854719..854754,860013..860102,861617..861690,863434..863499,864373..864414,865330..865384,868026..868129,871281..871356,871879..872020,873107..873207,874106..874179,874309..874434,874940..875063,875356..875445)
location: region:854719-875445:1
so has part: feature:854719-854754:1:exon
so has part: feature:860013-860102:1:exon
so has part: feature:861617-861690:1:exon
so has part: feature:863434-863499:1:exon
so has part: feature:864373-864414:1:exon
so has part: feature:865330-865384:1:exon
so has part: feature:868026-868129:1:exon
so has part: feature:871281-871356:1:exon
so has part: feature:871879-872020:1:exon
so has part: feature:873107-873207:1:exon
so has part: feature:874106-874179:1:exon
so has part: feature:874309-874434:1:exon
so has part: feature:874940-875063:1:exon
so has part: feature:875356-875445:1:exon

XP_041586836.1
type: Protein
SIO_000068: ncbiprotein

position:854719:1
position: 854719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875445:1
position: 875445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854719-854754:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:860013-860102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861617-861690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:863434-863499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:864373-864414:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865330-865384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:868026-868129:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:871281-871356:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:871879-872020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:873107-873207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:874106-874179:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:874309-874434:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:874940-875063:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:875356-875445:1:exon

PCID2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: PCID2
product: PCI domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041730904.1
SIO_010081: PCID2
subclass of: SO_0000673
so part of: PCID2
location: join(854763..855499,860013..860102,861617..861690,863434..863499,864373..864414,865330..865384,868026..868129,871281..871356,871879..872020,873107..873207,874106..874179,874309..874434,874940..875063,875356..876010)
location: region:854763-876010:1
so has part: feature:854763-855499:1:exon
so has part: feature:860013-860102:1:exon
so has part: feature:861617-861690:1:exon
so has part: feature:863434-863499:1:exon
so has part: feature:864373-864414:1:exon
so has part: feature:865330-865384:1:exon
so has part: feature:868026-868129:1:exon
so has part: feature:871281-871356:1:exon
so has part: feature:871879-872020:1:exon
so has part: feature:873107-873207:1:exon
so has part: feature:874106-874179:1:exon
so has part: feature:874309-874434:1:exon
so has part: feature:874940-875063:1:exon
so has part: feature:875356-876010:1:exon

position:854763:1
position: 854763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854763-855499:1:exon

position:855499:1
position: 855499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:860013-860102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861617-861690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:863434-863499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:864373-864414:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865330-865384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:868026-868129:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:871281-871356:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:871879-872020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:873107-873207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:874106-874179:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:874309-874434:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:874940-875063:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:875356-876010:1:exon

PCID2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: PCID2
product: PCI domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041730903.1
SIO_010081: PCID2
subclass of: SO_0000673
so part of: PCID2
location: join(856902..858577,860013..860102,861617..861690,863434..863499,864373..864414,865330..865384,868026..868129,871281..871356,871879..872020,873107..873207,874106..874179,874309..874434,874940..875063,875356..876010)
location: region:856902-876010:1
so has part: feature:856902-858577:1:exon
so has part: feature:860013-860102:1:exon
so has part: feature:861617-861690:1:exon
so has part: feature:863434-863499:1:exon
so has part: feature:864373-864414:1:exon
so has part: feature:865330-865384:1:exon
so has part: feature:868026-868129:1:exon
so has part: feature:871281-871356:1:exon
so has part: feature:871879-872020:1:exon
so has part: feature:873107-873207:1:exon
so has part: feature:874106-874179:1:exon
so has part: feature:874309-874434:1:exon
so has part: feature:874940-875063:1:exon
so has part: feature:875356-876010:1:exon

position:856902:1
position: 856902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:856902-858577:1:exon

position:858577:1
position: 858577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:860013-860102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861617-861690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:863434-863499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:864373-864414:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865330-865384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:868026-868129:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:871281-871356:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:871879-872020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:873107-873207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:874106-874179:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:874309-874434:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:874940-875063:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:875356-876010:1:exon

PCID2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: PCID2
product: PCI domain containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041730905.1
SIO_010081: PCID2
subclass of: SO_0000673
so part of: PCID2
location: join(861617..861690,868026..868129,871281..871356,871879..872020,873107..873207,874106..874179,874309..874434,874940..875063,875356..876010)
location: region:861617-876010:1
so has part: feature:861617-861690:1:exon
so has part: feature:868026-868129:1:exon
so has part: feature:871281-871356:1:exon
so has part: feature:871879-872020:1:exon
so has part: feature:873107-873207:1:exon
so has part: feature:874106-874179:1:exon
so has part: feature:874309-874434:1:exon
so has part: feature:874940-875063:1:exon
so has part: feature:875356-876010:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:861617-861690:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868026-868129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:871281-871356:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:871879-872020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873107-873207:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:874106-874179:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874309-874434:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:874940-875063:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:875356-876010:1:exon

PCID2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: PCID2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PCI domain-containing protein 2 isoform X2
translation: MASPEEKCQQVLEPPYDEMFAAHLRCTYAVGNHDFVEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRIFANNADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLIRAIDSSNLKDDYSTAQRVTFRYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTIELLRKYHLMQFAEVTKAVSEGNLLLLNEALTKHETFFIRCGIFLILEKLKIITYRNLFKKVYLLLRTHQLSLDAFLVALKFMQVEDVDIDEVQCILANLIYMGHIKGYISHQHQKLVVSKQNPFPPLSTVC
SIO_010081: PCID2
subclass of: SO_0000673
so part of: PCID2
location: join(861617..861690,863434..863499,864373..864414,865330..865384,868026..868129,871281..871356,871879..872020,873107..873207,874106..874179,874309..874434,874940..875063,875356..875445)
location: region:861617-875445:1
so has part: feature:861617-861690:1:exon
so has part: feature:863434-863499:1:exon
so has part: feature:864373-864414:1:exon
so has part: feature:865330-865384:1:exon
so has part: feature:868026-868129:1:exon
so has part: feature:871281-871356:1:exon
so has part: feature:871879-872020:1:exon
so has part: feature:873107-873207:1:exon
so has part: feature:874106-874179:1:exon
so has part: feature:874309-874434:1:exon
so has part: feature:874940-875063:1:exon
so has part: feature:875356-875445:1:exon

XP_041586837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:861617-861690:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863434-863499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864373-864414:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:865330-865384:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:868026-868129:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:871281-871356:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:871879-872020:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873107-873207:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:874106-874179:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:874309-874434:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:874940-875063:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:875356-875445:1:exon

PCID2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: PCID2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PCI domain-containing protein 2 isoform X2
translation: MASPEEKCQQVLEPPYDEMFAAHLRCTYAVGNHDFVEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRIFANNADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLIRAIDSSNLKDDYSTAQRVTFRYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTIELLRKYHLMQFAEVTKAVSEGNLLLLNEALTKHETFFIRCGIFLILEKLKIITYRNLFKKVYLLLRTHQLSLDAFLVALKFMQVEDVDIDEVQCILANLIYMGHIKGYISHQHQKLVVSKQNPFPPLSTVC
SIO_010081: PCID2
subclass of: SO_0000673
so part of: PCID2
location: join(861617..861690,863434..863499,864373..864414,865330..865384,868026..868129,871281..871356,871879..872020,873107..873207,874106..874179,874309..874434,874940..875063,875356..875445)
location: region:861617-875445:1
so has part: feature:861617-861690:1:exon
so has part: feature:863434-863499:1:exon
so has part: feature:864373-864414:1:exon
so has part: feature:865330-865384:1:exon
so has part: feature:868026-868129:1:exon
so has part: feature:871281-871356:1:exon
so has part: feature:871879-872020:1:exon
so has part: feature:873107-873207:1:exon
so has part: feature:874106-874179:1:exon
so has part: feature:874309-874434:1:exon
so has part: feature:874940-875063:1:exon
so has part: feature:875356-875445:1:exon

XP_041586838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:861617-861690:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863434-863499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864373-864414:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:865330-865384:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:868026-868129:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:871281-871356:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:871879-872020:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873107-873207:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:874106-874179:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:874309-874434:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:874940-875063:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:875356-875445:1:exon

PCID2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: PCID2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PCI domain-containing protein 2 isoform X2
translation: MASPEEKCQQVLEPPYDEMFAAHLRCTYAVGNHDFVEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRIFANNADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLIRAIDSSNLKDDYSTAQRVTFRYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTIELLRKYHLMQFAEVTKAVSEGNLLLLNEALTKHETFFIRCGIFLILEKLKIITYRNLFKKVYLLLRTHQLSLDAFLVALKFMQVEDVDIDEVQCILANLIYMGHIKGYISHQHQKLVVSKQNPFPPLSTVC
SIO_010081: PCID2
subclass of: SO_0000673
so part of: PCID2
location: join(861617..861690,863434..863499,864373..864414,865330..865384,868026..868129,871281..871356,871879..872020,873107..873207,874106..874179,874309..874434,874940..875063,875356..875445)
location: region:861617-875445:1
so has part: feature:861617-861690:1:exon
so has part: feature:863434-863499:1:exon
so has part: feature:864373-864414:1:exon
so has part: feature:865330-865384:1:exon
so has part: feature:868026-868129:1:exon
so has part: feature:871281-871356:1:exon
so has part: feature:871879-872020:1:exon
so has part: feature:873107-873207:1:exon
so has part: feature:874106-874179:1:exon
so has part: feature:874309-874434:1:exon
so has part: feature:874940-875063:1:exon
so has part: feature:875356-875445:1:exon

XP_041586840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:861617-861690:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863434-863499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864373-864414:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:865330-865384:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:868026-868129:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:871281-871356:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:871879-872020:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873107-873207:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:874106-874179:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:874309-874434:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:874940-875063:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:875356-875445:1:exon

PCID2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: PCID2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PCI domain-containing protein 2 isoform X3
translation: MLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLIRAIDSSNLKDDYSTAQRVTFRYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTIELLRKYHLMQFAEVTKAVSEGNLLLLNEALTKHETFFIRCGIFLILEKLKIITYRNLFKKVYLLLRTHQLSLDAFLVALKFMQVEDVDIDEVQCILANLIYMGHIKGYISHQHQKLVVSKQNPFPPLSTVC
SIO_010081: PCID2
subclass of: SO_0000673
so part of: PCID2
location: join(868071..868129,871281..871356,871879..872020,873107..873207,874106..874179,874309..874434,874940..875063,875356..875445)
location: region:868071-875445:1
so has part: feature:868071-868129:1:exon
so has part: feature:871281-871356:1:exon
so has part: feature:871879-872020:1:exon
so has part: feature:873107-873207:1:exon
so has part: feature:874106-874179:1:exon
so has part: feature:874309-874434:1:exon
so has part: feature:874940-875063:1:exon
so has part: feature:875356-875445:1:exon

XP_041586839.1
type: Protein
SIO_000068: ncbiprotein

position:868071:1
position: 868071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:868071-868129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:871281-871356:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:871879-872020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:873107-873207:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:874106-874179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:874309-874434:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874940-875063:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:875356-875445:1:exon

F10
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: F10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(881433..892503)
location: region:881433-892503:-1
so has part: feature:881433-892503:-1:exon
subclass of: SO_0000010

121477072
type: Gene
SIO_000068: ncbigene

position:881433:-1
position: 881433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892503:-1
position: 892503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881433-892503:-1:exon

F10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: F10
product: coagulation factor X, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041731280.1
SIO_010081: F10
subclass of: SO_0000673
so part of: F10
location: complement(join(881433..882088,882742..882855,884813..885072,886089..886220,887128..887241,887890..887914,890499..890659,892346..892503))
location: region:881433-892503:-1
so has part: feature:892346-892503:-1:exon
so has part: feature:890499-890659:-1:exon
so has part: feature:887890-887914:-1:exon
so has part: feature:887128-887241:-1:exon
so has part: feature:886089-886220:-1:exon
so has part: feature:884813-885072:-1:exon
so has part: feature:882742-882855:-1:exon
so has part: feature:881433-882088:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:892346-892503:-1:exon

position:892346:-1
position: 892346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:890499-890659:-1:exon

position:890499:-1
position: 890499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890659:-1
position: 890659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:887890-887914:-1:exon

position:887890:-1
position: 887890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887914:-1
position: 887914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:887128-887241:-1:exon

position:887128:-1
position: 887128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887241:-1
position: 887241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:886089-886220:-1:exon

position:886089:-1
position: 886089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886220:-1
position: 886220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:884813-885072:-1:exon

position:884813:-1
position: 884813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885072:-1
position: 885072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:882742-882855:-1:exon

position:882742:-1
position: 882742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882855:-1
position: 882855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:881433-882088:-1:exon

position:882088:-1
position: 882088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

F10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: F10
product: coagulation factor X, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041731281.1
SIO_010081: F10
subclass of: SO_0000673
so part of: F10
location: complement(join(881433..882039,882738..882855,884813..885072,886089..886220,887128..887241,887890..887914,890499..890659,892346..892503))
location: region:881433-892503:-1
so has part: feature:892346-892503:-1:exon
so has part: feature:890499-890659:-1:exon
so has part: feature:887890-887914:-1:exon
so has part: feature:887128-887241:-1:exon
so has part: feature:886089-886220:-1:exon
so has part: feature:884813-885072:-1:exon
so has part: feature:882738-882855:-1:exon
so has part: feature:881433-882039:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:892346-892503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890499-890659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:887890-887914:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887128-887241:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:886089-886220:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:884813-885072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:882738-882855:-1:exon

position:882738:-1
position: 882738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:881433-882039:-1:exon

position:882039:-1
position: 882039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

F10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: F10
product: coagulation factor X, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041731282.1
SIO_010081: F10
subclass of: SO_0000673
so part of: F10
location: complement(join(881433..882088,882742..882855,884813..885072,886089..886220,887128..887241,887890..887914,890499..890659,892247..892376))
location: region:881433-892376:-1
so has part: feature:892247-892376:-1:exon
so has part: feature:890499-890659:-1:exon
so has part: feature:887890-887914:-1:exon
so has part: feature:887128-887241:-1:exon
so has part: feature:886089-886220:-1:exon
so has part: feature:884813-885072:-1:exon
so has part: feature:882742-882855:-1:exon
so has part: feature:881433-882088:-1:exon

position:892376:-1
position: 892376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892247-892376:-1:exon

position:892247:-1
position: 892247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:890499-890659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:887890-887914:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887128-887241:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:886089-886220:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:884813-885072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:882742-882855:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:881433-882088:-1:exon

F10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: F10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coagulation factor X isoform X1
translation: MAGPLCLVLLSASLACLPLPGGSVFLSPERASNVLGRVRRANSFLEEMKKGNLERECMEETCSFEEAREVFEDTAKTMEFWNKYKDGDQCESSPCQNQGQCKDGLLEYSCICPEGYEGKNCELSTRKLCSVDNGDCDQFCREEQSSVVCSCASGYVLGDNGKSCISTEPFPCGKTTVGRRKRATETAPGSEAPPDAEEEAGMLEQYDPGDLSPTQSTMFLLPFNQTTSDLDEDASGLVRIVGGQDCRDGECPWQALLINEENEGFCGGTILSEYYILTAAHCLQQAKKFTVRIFYDHIPFFLQTPPVAGERDTDKEEGNEAAHEVEMIIKHNKFVRETYDFDIAVIKLKTPITFRMNVAPACLPQKDWAESTLMTQKTGIVSGFGKTHEKGRLSTTLKMMEVPYVDRNTCKLSSSFSITQNMFCAGYDSKPEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTNFLKWIDRSMKARGAAPALAGGPHT
SIO_010081: F10
subclass of: SO_0000673
so part of: F10
location: complement(join(881459..882088,882742..882855,884813..885072,886089..886220,887128..887241,887890..887914,890499..890659,892346..892415))
location: region:881459-892415:-1
so has part: feature:892346-892415:-1:exon
so has part: feature:890499-890659:-1:exon
so has part: feature:887890-887914:-1:exon
so has part: feature:887128-887241:-1:exon
so has part: feature:886089-886220:-1:exon
so has part: feature:884813-885072:-1:exon
so has part: feature:882742-882855:-1:exon
so has part: feature:881459-882088:-1:exon

XP_041587214.1
type: Protein
SIO_000068: ncbiprotein

position:881459:-1
position: 881459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892415:-1
position: 892415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892346-892415:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890499-890659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:887890-887914:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887128-887241:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:886089-886220:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:884813-885072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:882742-882855:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:881459-882088:-1:exon

F10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: F10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coagulation factor X isoform X2
translation: MAGPLCLVLLSASLACLPLPGGSVFLSPERASNVLGRVRRANSFLEEMKKGNLERECMEETCSFEEAREVFEDTAKTMEFWNKYKDGDQCESSPCQNQGQCKDGLLEYSCICPEGYEGKNCELSTRKLCSVDNGDCDQFCREEQSSVVCSCASGYVLGDNGKSCISTEPFPCGKTTVGRRKRATETAPGSEAPPDAEEEAGMLEQYDPGDLSPTQSTMFLLPFNQTTSDLDEDASGLVRIVGGQDCRDGECPWQALLINEENEGFCGGTILSEYYILTAAHCLQQAKKFTVRVGERDTDKEEGNEAAHEVEMIIKHNKFVRETYDFDIAVIKLKTPITFRMNVAPACLPQKDWAESTLMTQKTGIVSGFGKTHEKGRLSTTLKMMEVPYVDRNTCKLSSSFSITQNMFCAGYDSKPEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTNFLKWIDRSMKARGAAPALAGGPHT
SIO_010081: F10
subclass of: SO_0000673
so part of: F10
location: complement(join(881459..882039,882738..882855,884813..885072,886089..886220,887128..887241,887890..887914,890499..890659,892346..892415))
location: region:881459-892415:-1
so has part: feature:892346-892415:-1:exon
so has part: feature:890499-890659:-1:exon
so has part: feature:887890-887914:-1:exon
so has part: feature:887128-887241:-1:exon
so has part: feature:886089-886220:-1:exon
so has part: feature:884813-885072:-1:exon
so has part: feature:882738-882855:-1:exon
so has part: feature:881459-882039:-1:exon

XP_041587215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:892346-892415:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890499-890659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:887890-887914:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887128-887241:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:886089-886220:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:884813-885072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:882738-882855:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:881459-882039:-1:exon

F10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: F10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coagulation factor X isoform X3
translation: MKKGNLERECMEETCSFEEAREVFEDTAKTMEFWNKYKDGDQCESSPCQNQGQCKDGLLEYSCICPEGYEGKNCELSTRKLCSVDNGDCDQFCREEQSSVVCSCASGYVLGDNGKSCISTEPFPCGKTTVGRRKRATETAPGSEAPPDAEEEAGMLEQYDPGDLSPTQSTMFLLPFNQTTSDLDEDASGLVRIVGGQDCRDGECPWQALLINEENEGFCGGTILSEYYILTAAHCLQQAKKFTVRIFYDHIPFFLQTPPVAGERDTDKEEGNEAAHEVEMIIKHNKFVRETYDFDIAVIKLKTPITFRMNVAPACLPQKDWAESTLMTQKTGIVSGFGKTHEKGRLSTTLKMMEVPYVDRNTCKLSSSFSITQNMFCAGYDSKPEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTNFLKWIDRSMKARGAAPALAGGPHT
SIO_010081: F10
subclass of: SO_0000673
so part of: F10
location: complement(join(881459..882088,882742..882855,884813..885072,886089..886220,887128..887241,887890..887914,890499..890588))
location: region:881459-890588:-1
so has part: feature:890499-890588:-1:exon
so has part: feature:887890-887914:-1:exon
so has part: feature:887128-887241:-1:exon
so has part: feature:886089-886220:-1:exon
so has part: feature:884813-885072:-1:exon
so has part: feature:882742-882855:-1:exon
so has part: feature:881459-882088:-1:exon

XP_041587216.1
type: Protein
SIO_000068: ncbiprotein

position:890588:-1
position: 890588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:890499-890588:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:887890-887914:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:887128-887241:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:886089-886220:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:884813-885072:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:882742-882855:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:881459-882088:-1:exon

F10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: F10
product: coagulation factor X, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041731283.1
SIO_010081: F10
subclass of: SO_0000673
so part of: F10
location: complement(join(881839..882039,882742..882855,884813..885072,886089..886220,887128..887241,887890..887914,890499..890659,892346..892503))
location: region:881839-892503:-1
so has part: feature:892346-892503:-1:exon
so has part: feature:890499-890659:-1:exon
so has part: feature:887890-887914:-1:exon
so has part: feature:887128-887241:-1:exon
so has part: feature:886089-886220:-1:exon
so has part: feature:884813-885072:-1:exon
so has part: feature:882742-882855:-1:exon
so has part: feature:881839-882039:-1:exon

position:881839:-1
position: 881839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892346-892503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890499-890659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:887890-887914:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887128-887241:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:886089-886220:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:884813-885072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:882742-882855:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:881839-882039:-1:exon

F10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: F10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coagulation factor X isoform X4
translation: MAGPLCLVLLSASLACLPLPGGSVFLSPERASNVLGRVRRANSFLEEMKKGNLERECMEETCSFEEAREVFEDTAKTMEFWNKYKDGDQCESSPCQNQGQCKDGLLEYSCICPEGYEGKNCELSTRKLCSVDNGDCDQFCREEQSSVVCSCASGYVLGDNGKSCISTEPFPCGKTTVGRRKRATETAPGSEAPPDAEEEAGMLEQYDPGDLSPTQSTMFLLPFNQTTSDLDEDASGLVRIVGGQDCRDGECPWQALLINEENEGFCGGTILSEYYILTAAHCLQQAKKFTVRVNGTQTRRRAMRRHTRWK
SIO_010081: F10
subclass of: SO_0000673
so part of: F10
location: complement(join(881983..882039,882742..882855,884813..885072,886089..886220,887128..887241,887890..887914,890499..890659,892346..892415))
location: region:881983-892415:-1
so has part: feature:892346-892415:-1:exon
so has part: feature:890499-890659:-1:exon
so has part: feature:887890-887914:-1:exon
so has part: feature:887128-887241:-1:exon
so has part: feature:886089-886220:-1:exon
so has part: feature:884813-885072:-1:exon
so has part: feature:882742-882855:-1:exon
so has part: feature:881983-882039:-1:exon

XP_041587217.1
type: Protein
SIO_000068: ncbiprotein

position:881983:-1
position: 881983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892346-892415:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890499-890659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:887890-887914:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887128-887241:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:886089-886220:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:884813-885072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:882742-882855:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:881983-882039:-1:exon

LOC121477195
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121477195
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(891143..891225)
location: region:891143-891225:-1
so has part: feature:891143-891225:-1:exon

121477195
type: Gene
SIO_000068: ncbigene

position:891143:-1
position: 891143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891225:-1
position: 891225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891143-891225:-1:exon

LOC121477195
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121477195
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00015
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC121477195
subclass of: SO_0000673
so part of: LOC121477195
location: complement(891143..891225)
location: region:891143-891225:-1
so has part: feature:891143-891225:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:891143-891225:-1:exon

F7
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: F7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(895330..905920)
location: region:895330-905920:-1
so has part: feature:895330-905920:-1:exon
subclass of: SO_0000010

121477073
type: Gene
SIO_000068: ncbigene

position:895330:-1
position: 895330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905920:-1
position: 905920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:895330-905920:-1:exon

F7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: F7
product: coagulation factor VII, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041731286.1
SIO_010081: F7
subclass of: SO_0000673
so part of: F7
location: complement(join(895330..895972,896433..896556,898302..898411,899094..899234,901489..901602,901679..901703,903218..903378,905782..905920))
location: region:895330-905920:-1
so has part: feature:905782-905920:-1:exon
so has part: feature:903218-903378:-1:exon
so has part: feature:901679-901703:-1:exon
so has part: feature:901489-901602:-1:exon
so has part: feature:899094-899234:-1:exon
so has part: feature:898302-898411:-1:exon
so has part: feature:896433-896556:-1:exon
so has part: feature:895330-895972:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:905782-905920:-1:exon

position:905782:-1
position: 905782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:903218-903378:-1:exon

position:903218:-1
position: 903218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903378:-1
position: 903378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:901679-901703:-1:exon

position:901679:-1
position: 901679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901703:-1
position: 901703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:901489-901602:-1:exon

position:901489:-1
position: 901489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901602:-1
position: 901602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:899094-899234:-1:exon

position:899094:-1
position: 899094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899234:-1
position: 899234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:898302-898411:-1:exon

position:898302:-1
position: 898302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898411:-1
position: 898411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:896433-896556:-1:exon

position:896433:-1
position: 896433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896556:-1
position: 896556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:895330-895972:-1:exon

position:895972:-1
position: 895972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

F7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: F7
product: coagulation factor VII, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041731285.1
SIO_010081: F7
subclass of: SO_0000673
so part of: F7
location: complement(join(895330..895972,896433..896556,898302..898411,899094..899234,901489..901602,901679..901703,903218..903423,905782..905894))
location: region:895330-905894:-1
so has part: feature:905782-905894:-1:exon
so has part: feature:903218-903423:-1:exon
so has part: feature:901679-901703:-1:exon
so has part: feature:901489-901602:-1:exon
so has part: feature:899094-899234:-1:exon
so has part: feature:898302-898411:-1:exon
so has part: feature:896433-896556:-1:exon
so has part: feature:895330-895972:-1:exon

position:905894:-1
position: 905894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:905782-905894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903218-903423:-1:exon

position:903423:-1
position: 903423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:901679-901703:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:901489-901602:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:899094-899234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:898302-898411:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:896433-896556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895330-895972:-1:exon

F7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: F7
product: coagulation factor VII, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041731284.1
SIO_010081: F7
subclass of: SO_0000673
so part of: F7
location: complement(join(895330..895972,896433..896556,898302..898411,899094..899234,901489..901602,901679..901703,903218..903426,905782..905894))
location: region:895330-905894:-1
so has part: feature:905782-905894:-1:exon
so has part: feature:903218-903426:-1:exon
so has part: feature:901679-901703:-1:exon
so has part: feature:901489-901602:-1:exon
so has part: feature:899094-899234:-1:exon
so has part: feature:898302-898411:-1:exon
so has part: feature:896433-896556:-1:exon
so has part: feature:895330-895972:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:905782-905894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903218-903426:-1:exon

position:903426:-1
position: 903426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:901679-901703:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:901489-901602:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:899094-899234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:898302-898411:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:896433-896556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895330-895972:-1:exon

F7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: F7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coagulation factor VII isoform X3
translation: MGLTMVAWAGELALLCFLLGLQGSLAAVFLTQEEAQGVLHRQRRANSFLEELRAGSLERECREEQCSFEEAREIFQDVDRTRQFWISYKDGDQCASNPCQNGGSCEDQLQSYICFCPDDFQGRNCEKNKKDQLICMNDNGGCQQYCSDHAEARRSCWCHEGYTLQDDGVSCMPIVEYPCGKIPVLEKRIGSNPQGRIVGGKVCPKGECPWQAAVKVDGKLLCGGTLIDTSWVVSAAHCFERIKNWKNLTVVLGEHDLSEDDGDEQERHVAQVIVPDKYIPLKTNHDIALLHLRTPVAYTDHVVPLCLPEKTFSERTLAFIRFSTVSGWGQLLDRGATALQLMAIDVPRVMTQDCQEQSRRRSGSPAITENMFCAGYLDGSKDACQGDSGGPHATKFQGTWYLTGVVSWGEGCAAEGYFGVYTRVSQYIEWLRQLMISSHTLRGLLRAPLP
SIO_010081: F7
subclass of: SO_0000673
so part of: F7
location: complement(join(895377..895972,896433..896556,898302..898411,899094..899234,901489..901602,901679..901703,903218..903378,905782..905863))
location: region:895377-905863:-1
so has part: feature:905782-905863:-1:exon
so has part: feature:903218-903378:-1:exon
so has part: feature:901679-901703:-1:exon
so has part: feature:901489-901602:-1:exon
so has part: feature:899094-899234:-1:exon
so has part: feature:898302-898411:-1:exon
so has part: feature:896433-896556:-1:exon
so has part: feature:895377-895972:-1:exon

XP_041587220.1
type: Protein
SIO_000068: ncbiprotein

position:895377:-1
position: 895377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905863:-1
position: 905863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:905782-905863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903218-903378:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:901679-901703:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:901489-901602:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:899094-899234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:898302-898411:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:896433-896556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895377-895972:-1:exon

F7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: F7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coagulation factor VII isoform X2
translation: MGLTMVAWAGELALLCFLLGLQGSLAAGCGTGGSVLTGTPPQVFLTQEEAQGVLHRQRRANSFLEELRAGSLERECREEQCSFEEAREIFQDVDRTRQFWISYKDGDQCASNPCQNGGSCEDQLQSYICFCPDDFQGRNCEKNKKDQLICMNDNGGCQQYCSDHAEARRSCWCHEGYTLQDDGVSCMPIVEYPCGKIPVLEKRIGSNPQGRIVGGKVCPKGECPWQAAVKVDGKLLCGGTLIDTSWVVSAAHCFERIKNWKNLTVVLGEHDLSEDDGDEQERHVAQVIVPDKYIPLKTNHDIALLHLRTPVAYTDHVVPLCLPEKTFSERTLAFIRFSTVSGWGQLLDRGATALQLMAIDVPRVMTQDCQEQSRRRSGSPAITENMFCAGYLDGSKDACQGDSGGPHATKFQGTWYLTGVVSWGEGCAAEGYFGVYTRVSQYIEWLRQLMISSHTLRGLLRAPLP
SIO_010081: F7
subclass of: SO_0000673
so part of: F7
location: complement(join(895377..895972,896433..896556,898302..898411,899094..899234,901489..901602,901679..901703,903218..903423,905782..905863))
location: region:895377-905863:-1
so has part: feature:905782-905863:-1:exon
so has part: feature:903218-903423:-1:exon
so has part: feature:901679-901703:-1:exon
so has part: feature:901489-901602:-1:exon
so has part: feature:899094-899234:-1:exon
so has part: feature:898302-898411:-1:exon
so has part: feature:896433-896556:-1:exon
so has part: feature:895377-895972:-1:exon

XP_041587219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:905782-905863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903218-903423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:901679-901703:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:901489-901602:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:899094-899234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:898302-898411:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:896433-896556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895377-895972:-1:exon

F7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: F7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coagulation factor VII isoform X1
translation: MGLTMVAWAGELALLCFLLGLQGSLAAAGCGTGGSVLTGTPPQVFLTQEEAQGVLHRQRRANSFLEELRAGSLERECREEQCSFEEAREIFQDVDRTRQFWISYKDGDQCASNPCQNGGSCEDQLQSYICFCPDDFQGRNCEKNKKDQLICMNDNGGCQQYCSDHAEARRSCWCHEGYTLQDDGVSCMPIVEYPCGKIPVLEKRIGSNPQGRIVGGKVCPKGECPWQAAVKVDGKLLCGGTLIDTSWVVSAAHCFERIKNWKNLTVVLGEHDLSEDDGDEQERHVAQVIVPDKYIPLKTNHDIALLHLRTPVAYTDHVVPLCLPEKTFSERTLAFIRFSTVSGWGQLLDRGATALQLMAIDVPRVMTQDCQEQSRRRSGSPAITENMFCAGYLDGSKDACQGDSGGPHATKFQGTWYLTGVVSWGEGCAAEGYFGVYTRVSQYIEWLRQLMISSHTLRGLLRAPLP
SIO_010081: F7
subclass of: SO_0000673
so part of: F7
location: complement(join(895377..895972,896433..896556,898302..898411,899094..899234,901489..901602,901679..901703,903218..903426,905782..905863))
location: region:895377-905863:-1
so has part: feature:905782-905863:-1:exon
so has part: feature:903218-903426:-1:exon
so has part: feature:901679-901703:-1:exon
so has part: feature:901489-901602:-1:exon
so has part: feature:899094-899234:-1:exon
so has part: feature:898302-898411:-1:exon
so has part: feature:896433-896556:-1:exon
so has part: feature:895377-895972:-1:exon

XP_041587218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:905782-905863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903218-903426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:901679-901703:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:901489-901602:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:899094-899234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:898302-898411:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:896433-896556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895377-895972:-1:exon

MCF2L
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: MCF2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(907642..1002681)
location: region:907642-1002681:-1
so has part: feature:907642-1002681:-1:exon
subclass of: SO_0000010

121476837
type: Gene
SIO_000068: ncbigene

position:907642:-1
position: 907642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002681:-1
position: 1002681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:907642-1002681:-1:exon

MCF2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: MCF2L
product: MCF.2 cell line derived transforming sequence like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041730946.1
SIO_010081: MCF2L
subclass of: SO_0000673
so part of: MCF2L
location: complement(join(907642..909409,909523..909626,909709..909821,910740..910861,914899..915017,915681..915747,915864..915942,916848..916940,917185..917406,918094..918219,918388..918480,918564..918656,919681..919750,920872..920987,921613..921679,922160..922236,922406..922476,923135..923294,923776..923967,924366..924557,924769..924888,928065..928179,929277..929401,930030..930179,930682..930798,933239..933358,941810..941900,958334..958448,961155..961238,1002522..1002681))
location: region:907642-1002681:-1
so has part: feature:1002522-1002681:-1:exon
so has part: feature:961155-961238:-1:exon
so has part: feature:958334-958448:-1:exon
so has part: feature:941810-941900:-1:exon
so has part: feature:933239-933358:-1:exon
so has part: feature:930682-930798:-1:exon
so has part: feature:930030-930179:-1:exon
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so has part: feature:924769-924888:-1:exon
so has part: feature:924366-924557:-1:exon
so has part: feature:923776-923967:-1:exon
so has part: feature:923135-923294:-1:exon
so has part: feature:922406-922476:-1:exon
so has part: feature:922160-922236:-1:exon
so has part: feature:921613-921679:-1:exon
so has part: feature:920872-920987:-1:exon
so has part: feature:919681-919750:-1:exon
so has part: feature:918564-918656:-1:exon
so has part: feature:918388-918480:-1:exon
so has part: feature:918094-918219:-1:exon
so has part: feature:917185-917406:-1:exon
so has part: feature:916848-916940:-1:exon
so has part: feature:915864-915942:-1:exon
so has part: feature:915681-915747:-1:exon
so has part: feature:914899-915017:-1:exon
so has part: feature:910740-910861:-1:exon
so has part: feature:909709-909821:-1:exon
so has part: feature:909523-909626:-1:exon
so has part: feature:907642-909409:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1002522-1002681:-1:exon

position:1002522:-1
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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:961155-961238:-1:exon

position:961155:-1
position: 961155
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type: ReverseStrandPosition
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position:961238:-1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:958334-958448:-1:exon

position:958334:-1
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reference: sequence
type: ReverseStrandPosition
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position:958448:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:941810-941900:-1:exon

position:941810:-1
position: 941810
reference: sequence
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position:941900:-1
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urn:…
SIO_000300: 5
SIO_000628: feature:933239-933358:-1:exon

position:933239:-1
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reference: sequence
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position:933358:-1
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urn:…
SIO_000300: 6
SIO_000628: feature:930682-930798:-1:exon

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urn:…
SIO_000300: 7
SIO_000628: feature:930030-930179:-1:exon

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position:930179:-1
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urn:…
SIO_000300: 8
SIO_000628: feature:929277-929401:-1:exon

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position:929401:-1
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urn:…
SIO_000300: 9
SIO_000628: feature:928065-928179:-1:exon

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urn:…
SIO_000300: 10
SIO_000628: feature:924769-924888:-1:exon

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urn:…
SIO_000300: 11
SIO_000628: feature:924366-924557:-1:exon

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position:924557:-1
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urn:…
SIO_000300: 12
SIO_000628: feature:923776-923967:-1:exon

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urn:…
SIO_000300: 13
SIO_000628: feature:923135-923294:-1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:922406-922476:-1:exon

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urn:…
SIO_000300: 15
SIO_000628: feature:922160-922236:-1:exon

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urn:…
SIO_000300: 16
SIO_000628: feature:921613-921679:-1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:920872-920987:-1:exon

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position:920987:-1
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urn:…
SIO_000300: 18
SIO_000628: feature:919681-919750:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:918564-918656:-1:exon

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urn:…
SIO_000300: 20
SIO_000628: feature:918388-918480:-1:exon

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urn:…
SIO_000300: 21
SIO_000628: feature:918094-918219:-1:exon

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urn:…
SIO_000300: 22
SIO_000628: feature:917185-917406:-1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:916848-916940:-1:exon

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urn:…
SIO_000300: 24
SIO_000628: feature:915864-915942:-1:exon

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urn:…
SIO_000300: 25
SIO_000628: feature:915681-915747:-1:exon

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urn:…
SIO_000300: 26
SIO_000628: feature:914899-915017:-1:exon

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reference: sequence
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urn:…
SIO_000300: 27
SIO_000628: feature:910740-910861:-1:exon

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urn:…
SIO_000300: 28
SIO_000628: feature:909709-909821:-1:exon

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urn:…
SIO_000300: 29
SIO_000628: feature:909523-909626:-1:exon

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urn:…
SIO_000300: 30
SIO_000628: feature:907642-909409:-1:exon

position:909409:-1
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reference: sequence
type: ReverseStrandPosition
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MCF2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: MCF2L
product: MCF.2 cell line derived transforming sequence like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041730942.1
SIO_010081: MCF2L
subclass of: SO_0000673
so part of: MCF2L
location: complement(join(907642..909259,909523..909626,909709..909821,910740..910861,913551..913625,914581..914673,914899..915017,915681..915747,915864..915942,916848..916940,917185..917406,918094..918219,918388..918480,918564..918656,919681..919750,920872..920987,921613..921679,922160..922236,922406..922476,923135..923294,923776..923967,924366..924557,924769..924888,928065..928179,929277..929401,930030..930179,930682..930798,933239..933358,941810..941900,958334..958448,959917..959967,961155..961238,989387..989991))
location: region:907642-989991:-1
so has part: feature:989387-989991:-1:exon
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so has part: feature:924769-924888:-1:exon
so has part: feature:924366-924557:-1:exon
so has part: feature:923776-923967:-1:exon
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so has part: feature:922160-922236:-1:exon
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so has part: feature:920872-920987:-1:exon
so has part: feature:919681-919750:-1:exon
so has part: feature:918564-918656:-1:exon
so has part: feature:918388-918480:-1:exon
so has part: feature:918094-918219:-1:exon
so has part: feature:917185-917406:-1:exon
so has part: feature:916848-916940:-1:exon
so has part: feature:915864-915942:-1:exon
so has part: feature:915681-915747:-1:exon
so has part: feature:914899-915017:-1:exon
so has part: feature:914581-914673:-1:exon
so has part: feature:913551-913625:-1:exon
so has part: feature:910740-910861:-1:exon
so has part: feature:909709-909821:-1:exon
so has part: feature:909523-909626:-1:exon
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position:989991:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:989387-989991:-1:exon

position:989387:-1
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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:961155-961238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:959917-959967:-1:exon

position:959917:-1
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reference: sequence
type: ReverseStrandPosition
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position:959967:-1
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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:958334-958448:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:941810-941900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:933239-933358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930682-930798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930030-930179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:929277-929401:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:928065-928179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:924769-924888:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:924366-924557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:923776-923967:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:923135-923294:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922406-922476:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:922160-922236:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:921613-921679:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:920872-920987:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:919681-919750:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:918564-918656:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:918388-918480:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:918094-918219:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:917185-917406:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:916848-916940:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:915864-915942:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:915681-915747:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:914899-915017:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:914581-914673:-1:exon

position:914581:-1
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reference: sequence
type: ReverseStrandPosition
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position:914673:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 29
SIO_000628: feature:913551-913625:-1:exon

position:913551:-1
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reference: sequence
type: ReverseStrandPosition
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position:913625:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 30
SIO_000628: feature:910740-910861:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:909709-909821:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:909523-909626:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:907642-909259:-1:exon

position:909259:-1
position: 909259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MCF2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: MCF2L
product: MCF.2 cell line derived transforming sequence like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041730940.1
SIO_010081: MCF2L
subclass of: SO_0000673
so part of: MCF2L
location: complement(join(907642..909409,909523..909626,909709..909821,910740..910861,913551..913625,914581..914673,914899..915017,915681..915747,915864..915942,916848..916940,917185..917406,918094..918219,918388..918480,918564..918656,919681..919750,920872..920987,921613..921679,922160..922236,922406..922476,923135..923294,923776..923967,924366..924557,924769..924888,928065..928179,929277..929401,930030..930179,930682..930798,933239..933358,941810..941900,958334..958448,959917..959967,961155..961238,989387..989991))
location: region:907642-989991:-1
so has part: feature:989387-989991:-1:exon
so has part: feature:961155-961238:-1:exon
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so has part: feature:958334-958448:-1:exon
so has part: feature:941810-941900:-1:exon
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so has part: feature:909709-909821:-1:exon
so has part: feature:909523-909626:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:989387-989991:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961155-961238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:959917-959967:-1:exon

urn:…
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SIO_000628: feature:958334-958448:-1:exon

urn:…
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urn:…
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SIO_000628: feature:933239-933358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930682-930798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930030-930179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:929277-929401:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:928065-928179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:924769-924888:-1:exon

urn:…
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SIO_000628: feature:924366-924557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:923776-923967:-1:exon

urn:…
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SIO_000628: feature:923135-923294:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922406-922476:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:922160-922236:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:921613-921679:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:920872-920987:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:919681-919750:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:918564-918656:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:918388-918480:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:918094-918219:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:917185-917406:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:916848-916940:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:915864-915942:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:915681-915747:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:914899-915017:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:914581-914673:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:913551-913625:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:910740-910861:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:909709-909821:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:909523-909626:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:907642-909409:-1:exon

MCF2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: MCF2L
product: MCF.2 cell line derived transforming sequence like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041730947.1
SIO_010081: MCF2L
subclass of: SO_0000673
so part of: MCF2L
location: complement(join(907642..909409,909523..909626,909709..909821,910740..910861,913551..913625,914899..915017,915681..915747,915864..915942,916848..916940,917185..917406,918094..918219,918388..918480,918564..918656,919681..919750,920872..920987,921613..921679,922160..922236,922406..922476,923135..923294,923776..923967,924366..924557,924769..924888,928065..928179,929277..929401,930030..930179,930682..930798,933239..933358,941810..941900,958334..958448,961155..961238,989387..989989))
location: region:907642-989989:-1
so has part: feature:989387-989989:-1:exon
so has part: feature:961155-961238:-1:exon
so has part: feature:958334-958448:-1:exon
so has part: feature:941810-941900:-1:exon
so has part: feature:933239-933358:-1:exon
so has part: feature:930682-930798:-1:exon
so has part: feature:930030-930179:-1:exon
so has part: feature:929277-929401:-1:exon
so has part: feature:928065-928179:-1:exon
so has part: feature:924769-924888:-1:exon
so has part: feature:924366-924557:-1:exon
so has part: feature:923776-923967:-1:exon
so has part: feature:923135-923294:-1:exon
so has part: feature:922406-922476:-1:exon
so has part: feature:922160-922236:-1:exon
so has part: feature:921613-921679:-1:exon
so has part: feature:920872-920987:-1:exon
so has part: feature:919681-919750:-1:exon
so has part: feature:918564-918656:-1:exon
so has part: feature:918388-918480:-1:exon
so has part: feature:918094-918219:-1:exon
so has part: feature:917185-917406:-1:exon
so has part: feature:916848-916940:-1:exon
so has part: feature:915864-915942:-1:exon
so has part: feature:915681-915747:-1:exon
so has part: feature:914899-915017:-1:exon
so has part: feature:913551-913625:-1:exon
so has part: feature:910740-910861:-1:exon
so has part: feature:909709-909821:-1:exon
so has part: feature:909523-909626:-1:exon
so has part: feature:907642-909409:-1:exon

position:989989:-1
position: 989989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:989387-989989:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961155-961238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958334-958448:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:941810-941900:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:933239-933358:-1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:930030-930179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:929277-929401:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:928065-928179:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924769-924888:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:924366-924557:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:923776-923967:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:923135-923294:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:922406-922476:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922160-922236:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:921613-921679:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:920872-920987:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:919681-919750:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:918564-918656:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:918388-918480:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:918094-918219:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:917185-917406:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:916848-916940:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:915864-915942:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:915681-915747:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:914899-915017:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:913551-913625:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:910740-910861:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:909709-909821:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:909523-909626:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:907642-909409:-1:exon

MCF2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: MCF2L
product: MCF.2 cell line derived transforming sequence like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041730944.1
SIO_010081: MCF2L
subclass of: SO_0000673
so part of: MCF2L
location: complement(join(907642..909409,909523..909626,909709..909821,910740..910861,914899..915017,915681..915747,915864..915942,916848..916940,917185..917406,918094..918219,918388..918480,918564..918656,919681..919750,920872..920987,921613..921679,922160..922236,922406..922476,923135..923294,923776..923967,924366..924557,924769..924888,928065..928179,929277..929401,930030..930179,930682..930798,933239..933358,941810..941900,958334..958448,959917..959967,961155..961238,989387..989989))
location: region:907642-989989:-1
so has part: feature:989387-989989:-1:exon
so has part: feature:961155-961238:-1:exon
so has part: feature:959917-959967:-1:exon
so has part: feature:958334-958448:-1:exon
so has part: feature:941810-941900:-1:exon
so has part: feature:933239-933358:-1:exon
so has part: feature:930682-930798:-1:exon
so has part: feature:930030-930179:-1:exon
so has part: feature:929277-929401:-1:exon
so has part: feature:928065-928179:-1:exon
so has part: feature:924769-924888:-1:exon
so has part: feature:924366-924557:-1:exon
so has part: feature:923776-923967:-1:exon
so has part: feature:923135-923294:-1:exon
so has part: feature:922406-922476:-1:exon
so has part: feature:922160-922236:-1:exon
so has part: feature:921613-921679:-1:exon
so has part: feature:920872-920987:-1:exon
so has part: feature:919681-919750:-1:exon
so has part: feature:918564-918656:-1:exon
so has part: feature:918388-918480:-1:exon
so has part: feature:918094-918219:-1:exon
so has part: feature:917185-917406:-1:exon
so has part: feature:916848-916940:-1:exon
so has part: feature:915864-915942:-1:exon
so has part: feature:915681-915747:-1:exon
so has part: feature:914899-915017:-1:exon
so has part: feature:910740-910861:-1:exon
so has part: feature:909709-909821:-1:exon
so has part: feature:909523-909626:-1:exon
so has part: feature:907642-909409:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:989387-989989:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961155-961238:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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SIO_000300: 5
SIO_000628: feature:941810-941900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:933239-933358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930682-930798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930030-930179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:929277-929401:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:928065-928179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:924769-924888:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:924366-924557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:923776-923967:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:923135-923294:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922406-922476:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:922160-922236:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:921613-921679:-1:exon

urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
SIO_000628: feature:919681-919750:-1:exon

urn:…
SIO_000300: 20
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
SIO_000628: feature:916848-916940:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:915864-915942:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:915681-915747:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:914899-915017:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:910740-910861:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:909709-909821:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:909523-909626:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:907642-909409:-1:exon

MCF2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: MCF2L
product: MCF.2 cell line derived transforming sequence like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041730943.1
SIO_010081: MCF2L
subclass of: SO_0000673
so part of: MCF2L
location: complement(join(907642..909409,909523..909626,909709..909821,910740..910861,913551..913625,914899..915017,915681..915747,915864..915942,916848..916940,917185..917406,918094..918219,918388..918480,918564..918656,919681..919750,920872..920987,921613..921679,922160..922236,922406..922476,923135..923294,923776..923967,924366..924557,924769..924888,928065..928179,929277..929401,930030..930179,930682..930798,933239..933358,941810..941900,958334..958448,959917..959967,961155..961238,989387..989989))
location: region:907642-989989:-1
so has part: feature:989387-989989:-1:exon
so has part: feature:961155-961238:-1:exon
so has part: feature:959917-959967:-1:exon
so has part: feature:958334-958448:-1:exon
so has part: feature:941810-941900:-1:exon
so has part: feature:933239-933358:-1:exon
so has part: feature:930682-930798:-1:exon
so has part: feature:930030-930179:-1:exon
so has part: feature:929277-929401:-1:exon
so has part: feature:928065-928179:-1:exon
so has part: feature:924769-924888:-1:exon
so has part: feature:924366-924557:-1:exon
so has part: feature:923776-923967:-1:exon
so has part: feature:923135-923294:-1:exon
so has part: feature:922406-922476:-1:exon
so has part: feature:922160-922236:-1:exon
so has part: feature:921613-921679:-1:exon
so has part: feature:920872-920987:-1:exon
so has part: feature:919681-919750:-1:exon
so has part: feature:918564-918656:-1:exon
so has part: feature:918388-918480:-1:exon
so has part: feature:918094-918219:-1:exon
so has part: feature:917185-917406:-1:exon
so has part: feature:916848-916940:-1:exon
so has part: feature:915864-915942:-1:exon
so has part: feature:915681-915747:-1:exon
so has part: feature:914899-915017:-1:exon
so has part: feature:913551-913625:-1:exon
so has part: feature:910740-910861:-1:exon
so has part: feature:909709-909821:-1:exon
so has part: feature:909523-909626:-1:exon
so has part: feature:907642-909409:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:989387-989989:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961155-961238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:959917-959967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958334-958448:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:941810-941900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:933239-933358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930682-930798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930030-930179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:929277-929401:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:928065-928179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:924769-924888:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:924366-924557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:923776-923967:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:923135-923294:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922406-922476:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:922160-922236:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:921613-921679:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:920872-920987:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:919681-919750:-1:exon

urn:…
SIO_000300: 20
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urn:…
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SIO_000628: feature:918388-918480:-1:exon

urn:…
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SIO_000628: feature:918094-918219:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:917185-917406:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:916848-916940:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:915864-915942:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:915681-915747:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:914899-915017:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:913551-913625:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:910740-910861:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:909709-909821:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:909523-909626:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:907642-909409:-1:exon

MCF2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: MCF2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide exchange factor DBS isoform X2
translation: MAERGASRGTLRGLLRRLLPRPLRCSGASTHPQPDEIMHQDITPLCAADIQDQLKKRFAYLSGFLHMGIWLSDSEDPSQGGRGQDGSPVITFPDYPAFSDVPDKEFQNVMTYLTSIPSLQDAGIGFILVIDRRQDKWTSVKASILRIAASFPANLQLVLVLRPTGFFQRALSDLAFKFNRDDLKMKVPVIMLSSVPELHGYIDKSQLTEDLGGTLDYCHTRWLCHRTAIESFALMVKQTAQMLQSFGTELAETELPNDVQSTSSVLCAHTEKKDKAKEDMRLALDEGQSILENIREPLAKSGEQSLNQDELDNQTTVQRLLAQLNETEAAFDEFWAKHQQKLQQCLQLRHFEQDFREVKSSLDALAQKIATFTDVGNSLAHAEHLLKDLASFEEKSSASVKRAHTLSLEGEKLIDTKHYAVDSIRPKCHELQYLCDQFAAEVERRRGLLSKSLELHGLLEASMKWCDEGIYLLASQPVDKCQSQDGAEAALQEIEKFLETGAENKIQELNKIYQDYESILTKDLMEHVQKVFQKQEGMEEMFHRRQASLKKLAAKQMRPVQPVAPRPEALTKSPCPSPGSRRGSENSSEGSTLRRGPYRRAKSEVSESRQGRSSSTGHEEESLAVLRRHVMNELLDTERVYVEELLCVLEGYAAELDNPLMAHLMSPGLQNKKDILFGNMEEIYHFHNRIFLRELEEYTDCPELVGRCFLERMEEFQIYEKYCQNKPRSESLWRQCSDCPFFQECQRKLDHKLSLDSYLLKPVQRITKYQLLLKEMLKYSKSCEGAEDLQEALSSILGILKAVNDSMHLIAITGYDGNLSDLGKLLMQGSFSVWTDHKKGHSKVKDLARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMAAVGITENVKGDVRKFEIWYNAREEVYIVQAPTAEVKAAWVSEIRKVLTSQLQACREASQHRTLEQSQSLPLPTPPSTSPSKGTTRNIKKLEERKTDPLSLEGYMSPSSLLKPPEKGRDDMVTSSTSESSALSRKRFTLQGFANLKGQKASPTSPDKKPKRHEVKSDPTPFGLRGWSKTSHPLEAPEDNDGWSSAEELMNSSDAEEEGRVGPRKLVPGKYTVVVDDEKGSPEALAVRNGDMVEVVQEGDEGLWYVRNLSSSKESWVPASSLSALLGMSGSAQCLSSSVW
SIO_010081: MCF2L
subclass of: SO_0000673
so part of: MCF2L
location: complement(join(909252..909259,909523..909626,909709..909821,910740..910861,913551..913625,914581..914673,914899..915017,915681..915747,915864..915942,916848..916940,917185..917406,918094..918219,918388..918480,918564..918656,919681..919750,920872..920987,921613..921679,922160..922236,922406..922476,923135..923294,923776..923967,924366..924557,924769..924888,928065..928179,929277..929401,930030..930179,930682..930798,933239..933358,941810..941900,958334..958448,959917..959967,961155..961238,989387..989489))
location: region:909252-989489:-1
so has part: feature:989387-989489:-1:exon
so has part: feature:961155-961238:-1:exon
so has part: feature:959917-959967:-1:exon
so has part: feature:958334-958448:-1:exon
so has part: feature:941810-941900:-1:exon
so has part: feature:933239-933358:-1:exon
so has part: feature:930682-930798:-1:exon
so has part: feature:930030-930179:-1:exon
so has part: feature:929277-929401:-1:exon
so has part: feature:928065-928179:-1:exon
so has part: feature:924769-924888:-1:exon
so has part: feature:924366-924557:-1:exon
so has part: feature:923776-923967:-1:exon
so has part: feature:923135-923294:-1:exon
so has part: feature:922406-922476:-1:exon
so has part: feature:922160-922236:-1:exon
so has part: feature:921613-921679:-1:exon
so has part: feature:920872-920987:-1:exon
so has part: feature:919681-919750:-1:exon
so has part: feature:918564-918656:-1:exon
so has part: feature:918388-918480:-1:exon
so has part: feature:918094-918219:-1:exon
so has part: feature:917185-917406:-1:exon
so has part: feature:916848-916940:-1:exon
so has part: feature:915864-915942:-1:exon
so has part: feature:915681-915747:-1:exon
so has part: feature:914899-915017:-1:exon
so has part: feature:914581-914673:-1:exon
so has part: feature:913551-913625:-1:exon
so has part: feature:910740-910861:-1:exon
so has part: feature:909709-909821:-1:exon
so has part: feature:909523-909626:-1:exon
so has part: feature:909252-909259:-1:exon

XP_041586876.1
type: Protein
SIO_000068: ncbiprotein

position:909252:-1
position: 909252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989489:-1
position: 989489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:989387-989489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961155-961238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:959917-959967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958334-958448:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:941810-941900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:933239-933358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930682-930798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930030-930179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:929277-929401:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:928065-928179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:924769-924888:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:924366-924557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:923776-923967:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:923135-923294:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922406-922476:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:922160-922236:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:921613-921679:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:920872-920987:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:919681-919750:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:918564-918656:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:918388-918480:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:918094-918219:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:917185-917406:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:916848-916940:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:915864-915942:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:915681-915747:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:914899-915017:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:914581-914673:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:913551-913625:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:910740-910861:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:909709-909821:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:909523-909626:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:909252-909259:-1:exon

MCF2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: MCF2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide exchange factor DBS isoform X6
translation: MRFWLRNEEMALEAMVQRLTAVCKRTDEIMHQDITPLCAADIQDQLKKRFAYLSGGRGQDGSPVITFPDYPAFSDVPDKEFQNVMTYLTSIPSLQDAGIGFILVIDRRQDKWTSVKASILRIAASFPANLQLVLVLRPTGFFQRALSDLAFKFNRDDLKMKVPVIMLSSVPELHGYIDKSQLTEDLGGTLDYCHTRWLCHRTAIESFALMVKQTAQMLQSFGTELAETELPNDVQSTSSVLCAHTEKKDKAKEDMRLALDEGQSILENIREPLAKSGEQSLNQDELDNQTTVQRLLAQLNETEAAFDEFWAKHQQKLQQCLQLRHFEQDFREVKSSLDALAQKIATFTDVGNSLAHAEHLLKDLASFEEKSSASVKRAHTLSLEGEKLIDTKHYAVDSIRPKCHELQYLCDQFAAEVERRRGLLSKSLELHGLLEASMKWCDEGIYLLASQPVDKCQSQDGAEAALQEIEKFLETGAENKIQELNKIYQDYESILTKDLMEHVQKVFQKQEGMEEMFHRRQASLKKLAAKQMRPVQPVAPRPEALTKSPCPSPGSRRGSENSSEGSTLRRGPYRRAKSEVSESRQGRSSSTGHEEESLAVLRRHVMNELLDTERVYVEELLCVLEGYAAELDNPLMAHLMSPGLQNKKDILFGNMEEIYHFHNRIFLRELEEYTDCPELVGRCFLERMEEFQIYEKYCQNKPRSESLWRQCSDCPFFQECQRKLDHKLSLDSYLLKPVQRITKYQLLLKEMLKYSKSCEGAEDLQEALSSILGILKAVNDSMHLIAITGYDGNLSDLGKLLMQGSFSVWTDHKKGHSKVKDLARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMAAVGITENVKGDVRKFEIWYNAREEVYIVQAPTAEVKAAWVSEIRKVLTSQLQACREASQHRTLEQSQSLPLPTPPSTSPSKGTTRNIKKLEERKTDPLSLEGYMSPSSLLKPPEKGRGWSKTSHPLEAPEDNDGWSSAEELMNSSDAEEEGRVGPRKLVPGKYTVVVDDEKGSPEALAVRNGDMVEVVQEGDEGLWYVRNLSSSKESWVPASSLSALLGMSGSAQCLSSSESSAGSTLLSASSSCSESCGVPLSDLQG
SIO_010081: MCF2L
subclass of: SO_0000673
so part of: MCF2L
location: complement(join(909324..909409,909523..909626,909709..909821,910740..910861,914899..915017,915681..915747,915864..915942,916848..916940,917185..917406,918094..918219,918388..918480,918564..918656,919681..919750,920872..920987,921613..921679,922160..922236,922406..922476,923135..923294,923776..923967,924366..924557,924769..924888,928065..928179,929277..929401,930030..930179,930682..930798,933239..933358,941810..941900,958334..958448,961155..961238,1002522..1002600))
location: region:909324-1002600:-1
so has part: feature:1002522-1002600:-1:exon
so has part: feature:961155-961238:-1:exon
so has part: feature:958334-958448:-1:exon
so has part: feature:941810-941900:-1:exon
so has part: feature:933239-933358:-1:exon
so has part: feature:930682-930798:-1:exon
so has part: feature:930030-930179:-1:exon
so has part: feature:929277-929401:-1:exon
so has part: feature:928065-928179:-1:exon
so has part: feature:924769-924888:-1:exon
so has part: feature:924366-924557:-1:exon
so has part: feature:923776-923967:-1:exon
so has part: feature:923135-923294:-1:exon
so has part: feature:922406-922476:-1:exon
so has part: feature:922160-922236:-1:exon
so has part: feature:921613-921679:-1:exon
so has part: feature:920872-920987:-1:exon
so has part: feature:919681-919750:-1:exon
so has part: feature:918564-918656:-1:exon
so has part: feature:918388-918480:-1:exon
so has part: feature:918094-918219:-1:exon
so has part: feature:917185-917406:-1:exon
so has part: feature:916848-916940:-1:exon
so has part: feature:915864-915942:-1:exon
so has part: feature:915681-915747:-1:exon
so has part: feature:914899-915017:-1:exon
so has part: feature:910740-910861:-1:exon
so has part: feature:909709-909821:-1:exon
so has part: feature:909523-909626:-1:exon
so has part: feature:909324-909409:-1:exon

XP_041586880.1
type: Protein
SIO_000068: ncbiprotein

position:909324:-1
position: 909324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002600:-1
position: 1002600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002522-1002600:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961155-961238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958334-958448:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:941810-941900:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:933239-933358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:930682-930798:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930030-930179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:929277-929401:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:928065-928179:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924769-924888:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:924366-924557:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:923776-923967:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:923135-923294:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:922406-922476:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922160-922236:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:921613-921679:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:920872-920987:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:919681-919750:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:918564-918656:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:918388-918480:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:918094-918219:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:917185-917406:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:916848-916940:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:915864-915942:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:915681-915747:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:914899-915017:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:910740-910861:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:909709-909821:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:909523-909626:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:909324-909409:-1:exon

MCF2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: MCF2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide exchange factor DBS isoform X7
translation: MAERGASRGTLRGLLRRLLPRPLRCSGASTHPQPDEIMHQDITPLCAADIQDQLKKRFAYLSGGRGQDGSPVITFPDYPAFSDVPDKEFQNVMTYLTSIPSLQDAGIGFILVIDRRQDKWTSVKASILRIAASFPANLQLVLVLRPTGFFQRALSDLAFKFNRDDLKMKVPVIMLSSVPELHGYIDKSQLTEDLGGTLDYCHTRWLCHRTAIESFALMVKQTAQMLQSFGTELAETELPNDVQSTSSVLCAHTEKKDKAKEDMRLALDEGQSILENIREPLAKSGEQSLNQDELDNQTTVQRLLAQLNETEAAFDEFWAKHQQKLQQCLQLRHFEQDFREVKSSLDALAQKIATFTDVGNSLAHAEHLLKDLASFEEKSSASVKRAHTLSLEGEKLIDTKHYAVDSIRPKCHELQYLCDQFAAEVERRRGLLSKSLELHGLLEASMKWCDEGIYLLASQPVDKCQSQDGAEAALQEIEKFLETGAENKIQELNKIYQDYESILTKDLMEHVQKVFQKQEGMEEMFHRRQASLKKLAAKQMRPVQPVAPRPEALTKSPCPSPGSRRGSENSSEGSTLRRGPYRRAKSEVSESRQGRSSSTGHEEESLAVLRRHVMNELLDTERVYVEELLCVLEGYAAELDNPLMAHLMSPGLQNKKDILFGNMEEIYHFHNRIFLRELEEYTDCPELVGRCFLERMEEFQIYEKYCQNKPRSESLWRQCSDCPFFQECQRKLDHKLSLDSYLLKPVQRITKYQLLLKEMLKYSKSCEGAEDLQEALSSILGILKAVNDSMHLIAITGYDGNLSDLGKLLMQGSFSVWTDHKKGHSKVKDLARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMAAVGITENVKGDVRKFEIWYNAREEVYIVQAPTAEVKAAWVSEIRKVLTSQLQACREASQHRTLEQSQSLPLPTPPSTSPSKGTTRNIKKLEERKTDPLSLEGYMSPSSLLKPPEKGRASPTSPDKKPKRHEVKSDPTPFGLRGWSKTSHPLEAPEDNDGWSSAEELMNSSDAEEEGRVGPRKLVPGKYTVVVDDEKGSPEALAVRNGDMVEVVQEGDEGLWYVRNLSSSKESWVPASSLSALLGMSGSAQCLSSSESSAGSTLLSASSSCSESCGVPLSDLQG
SIO_010081: MCF2L
subclass of: SO_0000673
so part of: MCF2L
location: complement(join(909324..909409,909523..909626,909709..909821,910740..910861,913551..913625,914899..915017,915681..915747,915864..915942,916848..916940,917185..917406,918094..918219,918388..918480,918564..918656,919681..919750,920872..920987,921613..921679,922160..922236,922406..922476,923135..923294,923776..923967,924366..924557,924769..924888,928065..928179,929277..929401,930030..930179,930682..930798,933239..933358,941810..941900,958334..958448,961155..961238,989387..989489))
location: region:909324-989489:-1
so has part: feature:989387-989489:-1:exon
so has part: feature:961155-961238:-1:exon
so has part: feature:958334-958448:-1:exon
so has part: feature:941810-941900:-1:exon
so has part: feature:933239-933358:-1:exon
so has part: feature:930682-930798:-1:exon
so has part: feature:930030-930179:-1:exon
so has part: feature:929277-929401:-1:exon
so has part: feature:928065-928179:-1:exon
so has part: feature:924769-924888:-1:exon
so has part: feature:924366-924557:-1:exon
so has part: feature:923776-923967:-1:exon
so has part: feature:923135-923294:-1:exon
so has part: feature:922406-922476:-1:exon
so has part: feature:922160-922236:-1:exon
so has part: feature:921613-921679:-1:exon
so has part: feature:920872-920987:-1:exon
so has part: feature:919681-919750:-1:exon
so has part: feature:918564-918656:-1:exon
so has part: feature:918388-918480:-1:exon
so has part: feature:918094-918219:-1:exon
so has part: feature:917185-917406:-1:exon
so has part: feature:916848-916940:-1:exon
so has part: feature:915864-915942:-1:exon
so has part: feature:915681-915747:-1:exon
so has part: feature:914899-915017:-1:exon
so has part: feature:913551-913625:-1:exon
so has part: feature:910740-910861:-1:exon
so has part: feature:909709-909821:-1:exon
so has part: feature:909523-909626:-1:exon
so has part: feature:909324-909409:-1:exon

XP_041586881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:989387-989489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961155-961238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958334-958448:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:941810-941900:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:933239-933358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:930682-930798:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930030-930179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:929277-929401:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:928065-928179:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924769-924888:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:924366-924557:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:923776-923967:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:923135-923294:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:922406-922476:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922160-922236:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:921613-921679:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:920872-920987:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:919681-919750:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:918564-918656:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:918388-918480:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:918094-918219:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:917185-917406:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:916848-916940:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:915864-915942:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:915681-915747:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:914899-915017:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:913551-913625:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:910740-910861:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:909709-909821:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:909523-909626:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:909324-909409:-1:exon

MCF2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: MCF2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide exchange factor DBS isoform X4
translation: MAERGASRGTLRGLLRRLLPRPLRCSGASTHPQPDEIMHQDITPLCAADIQDQLKKRFAYLSGFLHMGIWLSDSEDPSQGGRGQDGSPVITFPDYPAFSDVPDKEFQNVMTYLTSIPSLQDAGIGFILVIDRRQDKWTSVKASILRIAASFPANLQLVLVLRPTGFFQRALSDLAFKFNRDDLKMKVPVIMLSSVPELHGYIDKSQLTEDLGGTLDYCHTRWLCHRTAIESFALMVKQTAQMLQSFGTELAETELPNDVQSTSSVLCAHTEKKDKAKEDMRLALDEGQSILENIREPLAKSGEQSLNQDELDNQTTVQRLLAQLNETEAAFDEFWAKHQQKLQQCLQLRHFEQDFREVKSSLDALAQKIATFTDVGNSLAHAEHLLKDLASFEEKSSASVKRAHTLSLEGEKLIDTKHYAVDSIRPKCHELQYLCDQFAAEVERRRGLLSKSLELHGLLEASMKWCDEGIYLLASQPVDKCQSQDGAEAALQEIEKFLETGAENKIQELNKIYQDYESILTKDLMEHVQKVFQKQEGMEEMFHRRQASLKKLAAKQMRPVQPVAPRPEALTKSPCPSPGSRRGSENSSEGSTLRRGPYRRAKSEVSESRQGRSSSTGHEEESLAVLRRHVMNELLDTERVYVEELLCVLEGYAAELDNPLMAHLMSPGLQNKKDILFGNMEEIYHFHNRIFLRELEEYTDCPELVGRCFLERMEEFQIYEKYCQNKPRSESLWRQCSDCPFFQECQRKLDHKLSLDSYLLKPVQRITKYQLLLKEMLKYSKSCEGAEDLQEALSSILGILKAVNDSMHLIAITGYDGNLSDLGKLLMQGSFSVWTDHKKGHSKVKDLARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMAAVGITENVKGDVRKFEIWYNAREEVYIVQAPTAEVKAAWVSEIRKVLTSQLQACREASQHRTLEQSQSLPLPTPPSTSPSKGTTRNIKKLEERKTDPLSLEGYMSPSSLLKPPEKGRGWSKTSHPLEAPEDNDGWSSAEELMNSSDAEEEGRVGPRKLVPGKYTVVVDDEKGSPEALAVRNGDMVEVVQEGDEGLWYVRNLSSSKESWVPASSLSALLGMSGSAQCLSSSESSAGSTLLSASSSCSESCGVPLSDLQG
SIO_010081: MCF2L
subclass of: SO_0000673
so part of: MCF2L
location: complement(join(909324..909409,909523..909626,909709..909821,910740..910861,914899..915017,915681..915747,915864..915942,916848..916940,917185..917406,918094..918219,918388..918480,918564..918656,919681..919750,920872..920987,921613..921679,922160..922236,922406..922476,923135..923294,923776..923967,924366..924557,924769..924888,928065..928179,929277..929401,930030..930179,930682..930798,933239..933358,941810..941900,958334..958448,959917..959967,961155..961238,989387..989489))
location: region:909324-989489:-1
so has part: feature:989387-989489:-1:exon
so has part: feature:961155-961238:-1:exon
so has part: feature:959917-959967:-1:exon
so has part: feature:958334-958448:-1:exon
so has part: feature:941810-941900:-1:exon
so has part: feature:933239-933358:-1:exon
so has part: feature:930682-930798:-1:exon
so has part: feature:930030-930179:-1:exon
so has part: feature:929277-929401:-1:exon
so has part: feature:928065-928179:-1:exon
so has part: feature:924769-924888:-1:exon
so has part: feature:924366-924557:-1:exon
so has part: feature:923776-923967:-1:exon
so has part: feature:923135-923294:-1:exon
so has part: feature:922406-922476:-1:exon
so has part: feature:922160-922236:-1:exon
so has part: feature:921613-921679:-1:exon
so has part: feature:920872-920987:-1:exon
so has part: feature:919681-919750:-1:exon
so has part: feature:918564-918656:-1:exon
so has part: feature:918388-918480:-1:exon
so has part: feature:918094-918219:-1:exon
so has part: feature:917185-917406:-1:exon
so has part: feature:916848-916940:-1:exon
so has part: feature:915864-915942:-1:exon
so has part: feature:915681-915747:-1:exon
so has part: feature:914899-915017:-1:exon
so has part: feature:910740-910861:-1:exon
so has part: feature:909709-909821:-1:exon
so has part: feature:909523-909626:-1:exon
so has part: feature:909324-909409:-1:exon

XP_041586878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:989387-989489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961155-961238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:959917-959967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958334-958448:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:941810-941900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:933239-933358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930682-930798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930030-930179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:929277-929401:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:928065-928179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:924769-924888:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:924366-924557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:923776-923967:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:923135-923294:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922406-922476:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:922160-922236:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:921613-921679:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:920872-920987:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:919681-919750:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:918564-918656:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:918388-918480:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:918094-918219:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:917185-917406:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:916848-916940:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:915864-915942:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:915681-915747:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:914899-915017:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:910740-910861:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:909709-909821:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:909523-909626:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:909324-909409:-1:exon

MCF2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: MCF2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide exchange factor DBS isoform X3
translation: MAERGASRGTLRGLLRRLLPRPLRCSGASTHPQPDEIMHQDITPLCAADIQDQLKKRFAYLSGFLHMGIWLSDSEDPSQGGRGQDGSPVITFPDYPAFSDVPDKEFQNVMTYLTSIPSLQDAGIGFILVIDRRQDKWTSVKASILRIAASFPANLQLVLVLRPTGFFQRALSDLAFKFNRDDLKMKVPVIMLSSVPELHGYIDKSQLTEDLGGTLDYCHTRWLCHRTAIESFALMVKQTAQMLQSFGTELAETELPNDVQSTSSVLCAHTEKKDKAKEDMRLALDEGQSILENIREPLAKSGEQSLNQDELDNQTTVQRLLAQLNETEAAFDEFWAKHQQKLQQCLQLRHFEQDFREVKSSLDALAQKIATFTDVGNSLAHAEHLLKDLASFEEKSSASVKRAHTLSLEGEKLIDTKHYAVDSIRPKCHELQYLCDQFAAEVERRRGLLSKSLELHGLLEASMKWCDEGIYLLASQPVDKCQSQDGAEAALQEIEKFLETGAENKIQELNKIYQDYESILTKDLMEHVQKVFQKQEGMEEMFHRRQASLKKLAAKQMRPVQPVAPRPEALTKSPCPSPGSRRGSENSSEGSTLRRGPYRRAKSEVSESRQGRSSSTGHEEESLAVLRRHVMNELLDTERVYVEELLCVLEGYAAELDNPLMAHLMSPGLQNKKDILFGNMEEIYHFHNRIFLRELEEYTDCPELVGRCFLERMEEFQIYEKYCQNKPRSESLWRQCSDCPFFQECQRKLDHKLSLDSYLLKPVQRITKYQLLLKEMLKYSKSCEGAEDLQEALSSILGILKAVNDSMHLIAITGYDGNLSDLGKLLMQGSFSVWTDHKKGHSKVKDLARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMAAVGITENVKGDVRKFEIWYNAREEVYIVQAPTAEVKAAWVSEIRKVLTSQLQACREASQHRTLEQSQSLPLPTPPSTSPSKGTTRNIKKLEERKTDPLSLEGYMSPSSLLKPPEKGRASPTSPDKKPKRHEVKSDPTPFGLRGWSKTSHPLEAPEDNDGWSSAEELMNSSDAEEEGRVGPRKLVPGKYTVVVDDEKGSPEALAVRNGDMVEVVQEGDEGLWYVRNLSSSKESWVPASSLSALLGMSGSAQCLSSSESSAGSTLLSASSSCSESCGVPLSDLQG
SIO_010081: MCF2L
subclass of: SO_0000673
so part of: MCF2L
location: complement(join(909324..909409,909523..909626,909709..909821,910740..910861,913551..913625,914899..915017,915681..915747,915864..915942,916848..916940,917185..917406,918094..918219,918388..918480,918564..918656,919681..919750,920872..920987,921613..921679,922160..922236,922406..922476,923135..923294,923776..923967,924366..924557,924769..924888,928065..928179,929277..929401,930030..930179,930682..930798,933239..933358,941810..941900,958334..958448,959917..959967,961155..961238,989387..989489))
location: region:909324-989489:-1
so has part: feature:989387-989489:-1:exon
so has part: feature:961155-961238:-1:exon
so has part: feature:959917-959967:-1:exon
so has part: feature:958334-958448:-1:exon
so has part: feature:941810-941900:-1:exon
so has part: feature:933239-933358:-1:exon
so has part: feature:930682-930798:-1:exon
so has part: feature:930030-930179:-1:exon
so has part: feature:929277-929401:-1:exon
so has part: feature:928065-928179:-1:exon
so has part: feature:924769-924888:-1:exon
so has part: feature:924366-924557:-1:exon
so has part: feature:923776-923967:-1:exon
so has part: feature:923135-923294:-1:exon
so has part: feature:922406-922476:-1:exon
so has part: feature:922160-922236:-1:exon
so has part: feature:921613-921679:-1:exon
so has part: feature:920872-920987:-1:exon
so has part: feature:919681-919750:-1:exon
so has part: feature:918564-918656:-1:exon
so has part: feature:918388-918480:-1:exon
so has part: feature:918094-918219:-1:exon
so has part: feature:917185-917406:-1:exon
so has part: feature:916848-916940:-1:exon
so has part: feature:915864-915942:-1:exon
so has part: feature:915681-915747:-1:exon
so has part: feature:914899-915017:-1:exon
so has part: feature:913551-913625:-1:exon
so has part: feature:910740-910861:-1:exon
so has part: feature:909709-909821:-1:exon
so has part: feature:909523-909626:-1:exon
so has part: feature:909324-909409:-1:exon

XP_041586877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:989387-989489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961155-961238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:959917-959967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958334-958448:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:941810-941900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:933239-933358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930682-930798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930030-930179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:929277-929401:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:928065-928179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:924769-924888:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:924366-924557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:923776-923967:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:923135-923294:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922406-922476:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:922160-922236:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:921613-921679:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:920872-920987:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:919681-919750:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:918564-918656:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:918388-918480:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:918094-918219:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:917185-917406:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:916848-916940:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:915864-915942:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:915681-915747:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:914899-915017:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:913551-913625:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:910740-910861:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:909709-909821:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:909523-909626:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:909324-909409:-1:exon

MCF2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: MCF2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide exchange factor DBS isoform X1
translation: MAERGASRGTLRGLLRRLLPRPLRCSGASTHPQPDEIMHQDITPLCAADIQDQLKKRFAYLSGFLHMGIWLSDSEDPSQGGRGQDGSPVITFPDYPAFSDVPDKEFQNVMTYLTSIPSLQDAGIGFILVIDRRQDKWTSVKASILRIAASFPANLQLVLVLRPTGFFQRALSDLAFKFNRDDLKMKVPVIMLSSVPELHGYIDKSQLTEDLGGTLDYCHTRWLCHRTAIESFALMVKQTAQMLQSFGTELAETELPNDVQSTSSVLCAHTEKKDKAKEDMRLALDEGQSILENIREPLAKSGEQSLNQDELDNQTTVQRLLAQLNETEAAFDEFWAKHQQKLQQCLQLRHFEQDFREVKSSLDALAQKIATFTDVGNSLAHAEHLLKDLASFEEKSSASVKRAHTLSLEGEKLIDTKHYAVDSIRPKCHELQYLCDQFAAEVERRRGLLSKSLELHGLLEASMKWCDEGIYLLASQPVDKCQSQDGAEAALQEIEKFLETGAENKIQELNKIYQDYESILTKDLMEHVQKVFQKQEGMEEMFHRRQASLKKLAAKQMRPVQPVAPRPEALTKSPCPSPGSRRGSENSSEGSTLRRGPYRRAKSEVSESRQGRSSSTGHEEESLAVLRRHVMNELLDTERVYVEELLCVLEGYAAELDNPLMAHLMSPGLQNKKDILFGNMEEIYHFHNRIFLRELEEYTDCPELVGRCFLERMEEFQIYEKYCQNKPRSESLWRQCSDCPFFQECQRKLDHKLSLDSYLLKPVQRITKYQLLLKEMLKYSKSCEGAEDLQEALSSILGILKAVNDSMHLIAITGYDGNLSDLGKLLMQGSFSVWTDHKKGHSKVKDLARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMAAVGITENVKGDVRKFEIWYNAREEVYIVQAPTAEVKAAWVSEIRKVLTSQLQACREASQHRTLEQSQSLPLPTPPSTSPSKGTTRNIKKLEERKTDPLSLEGYMSPSSLLKPPEKGRDDMVTSSTSESSALSRKRFTLQGFANLKGQKASPTSPDKKPKRHEVKSDPTPFGLRGWSKTSHPLEAPEDNDGWSSAEELMNSSDAEEEGRVGPRKLVPGKYTVVVDDEKGSPEALAVRNGDMVEVVQEGDEGLWYVRNLSSSKESWVPASSLSALLGMSGSAQCLSSSESSAGSTLLSASSSCSESCGVPLSDLQG
SIO_010081: MCF2L
subclass of: SO_0000673
so part of: MCF2L
location: complement(join(909324..909409,909523..909626,909709..909821,910740..910861,913551..913625,914581..914673,914899..915017,915681..915747,915864..915942,916848..916940,917185..917406,918094..918219,918388..918480,918564..918656,919681..919750,920872..920987,921613..921679,922160..922236,922406..922476,923135..923294,923776..923967,924366..924557,924769..924888,928065..928179,929277..929401,930030..930179,930682..930798,933239..933358,941810..941900,958334..958448,959917..959967,961155..961238,989387..989489))
location: region:909324-989489:-1
so has part: feature:989387-989489:-1:exon
so has part: feature:961155-961238:-1:exon
so has part: feature:959917-959967:-1:exon
so has part: feature:958334-958448:-1:exon
so has part: feature:941810-941900:-1:exon
so has part: feature:933239-933358:-1:exon
so has part: feature:930682-930798:-1:exon
so has part: feature:930030-930179:-1:exon
so has part: feature:929277-929401:-1:exon
so has part: feature:928065-928179:-1:exon
so has part: feature:924769-924888:-1:exon
so has part: feature:924366-924557:-1:exon
so has part: feature:923776-923967:-1:exon
so has part: feature:923135-923294:-1:exon
so has part: feature:922406-922476:-1:exon
so has part: feature:922160-922236:-1:exon
so has part: feature:921613-921679:-1:exon
so has part: feature:920872-920987:-1:exon
so has part: feature:919681-919750:-1:exon
so has part: feature:918564-918656:-1:exon
so has part: feature:918388-918480:-1:exon
so has part: feature:918094-918219:-1:exon
so has part: feature:917185-917406:-1:exon
so has part: feature:916848-916940:-1:exon
so has part: feature:915864-915942:-1:exon
so has part: feature:915681-915747:-1:exon
so has part: feature:914899-915017:-1:exon
so has part: feature:914581-914673:-1:exon
so has part: feature:913551-913625:-1:exon
so has part: feature:910740-910861:-1:exon
so has part: feature:909709-909821:-1:exon
so has part: feature:909523-909626:-1:exon
so has part: feature:909324-909409:-1:exon

XP_041586874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:989387-989489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961155-961238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:959917-959967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958334-958448:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:941810-941900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:933239-933358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930682-930798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930030-930179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:929277-929401:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:928065-928179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:924769-924888:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:924366-924557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:923776-923967:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:923135-923294:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922406-922476:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:922160-922236:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:921613-921679:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:920872-920987:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:919681-919750:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:918564-918656:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:918388-918480:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:918094-918219:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:917185-917406:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:916848-916940:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:915864-915942:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:915681-915747:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:914899-915017:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:914581-914673:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:913551-913625:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:910740-910861:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:909709-909821:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:909523-909626:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:909324-909409:-1:exon

MCF2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: MCF2L
product: MCF.2 cell line derived transforming sequence like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041730948.1
SIO_010081: MCF2L
subclass of: SO_0000673
so part of: MCF2L
location: complement(join(909705..909821,910740..910861,914899..915017,915681..915747,915864..915942,916848..916940,917185..917406,918094..918219,918388..918480,918564..918656,919681..919750,920872..920987,921613..921679,922160..922236,922406..922476,923135..923294,923776..923967,924366..924557,924769..924888,928065..928179,929277..929401,930030..930179,930682..930798,933239..933358,941810..941900,958334..958448,961155..961238,989387..989989))
location: region:909705-989989:-1
so has part: feature:989387-989989:-1:exon
so has part: feature:961155-961238:-1:exon
so has part: feature:958334-958448:-1:exon
so has part: feature:941810-941900:-1:exon
so has part: feature:933239-933358:-1:exon
so has part: feature:930682-930798:-1:exon
so has part: feature:930030-930179:-1:exon
so has part: feature:929277-929401:-1:exon
so has part: feature:928065-928179:-1:exon
so has part: feature:924769-924888:-1:exon
so has part: feature:924366-924557:-1:exon
so has part: feature:923776-923967:-1:exon
so has part: feature:923135-923294:-1:exon
so has part: feature:922406-922476:-1:exon
so has part: feature:922160-922236:-1:exon
so has part: feature:921613-921679:-1:exon
so has part: feature:920872-920987:-1:exon
so has part: feature:919681-919750:-1:exon
so has part: feature:918564-918656:-1:exon
so has part: feature:918388-918480:-1:exon
so has part: feature:918094-918219:-1:exon
so has part: feature:917185-917406:-1:exon
so has part: feature:916848-916940:-1:exon
so has part: feature:915864-915942:-1:exon
so has part: feature:915681-915747:-1:exon
so has part: feature:914899-915017:-1:exon
so has part: feature:910740-910861:-1:exon
so has part: feature:909705-909821:-1:exon

position:909705:-1
position: 909705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:989387-989989:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961155-961238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958334-958448:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:941810-941900:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:933239-933358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:930682-930798:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930030-930179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:929277-929401:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:928065-928179:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924769-924888:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:924366-924557:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:923776-923967:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:923135-923294:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:922406-922476:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922160-922236:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:921613-921679:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:920872-920987:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:919681-919750:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:918564-918656:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:918388-918480:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:918094-918219:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:917185-917406:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:916848-916940:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:915864-915942:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:915681-915747:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:914899-915017:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:910740-910861:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:909705-909821:-1:exon

MCF2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: MCF2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide exchange factor DBS isoform X8
translation: MAERGASRGTLRGLLRRLLPRPLRCSGASTHPQPDEIMHQDITPLCAADIQDQLKKRFAYLSGGRGQDGSPVITFPDYPAFSDVPDKEFQNVMTYLTSIPSLQDAGIGFILVIDRRQDKWTSVKASILRIAASFPANLQLVLVLRPTGFFQRALSDLAFKFNRDDLKMKVPVIMLSSVPELHGYIDKSQLTEDLGGTLDYCHTRWLCHRTAIESFALMVKQTAQMLQSFGTELAETELPNDVQSTSSVLCAHTEKKDKAKEDMRLALDEGQSILENIREPLAKSGEQSLNQDELDNQTTVQRLLAQLNETEAAFDEFWAKHQQKLQQCLQLRHFEQDFREVKSSLDALAQKIATFTDVGNSLAHAEHLLKDLASFEEKSSASVKRAHTLSLEGEKLIDTKHYAVDSIRPKCHELQYLCDQFAAEVERRRGLLSKSLELHGLLEASMKWCDEGIYLLASQPVDKCQSQDGAEAALQEIEKFLETGAENKIQELNKIYQDYESILTKDLMEHVQKVFQKQEGMEEMFHRRQASLKKLAAKQMRPVQPVAPRPEALTKSPCPSPGSRRGSENSSEGSTLRRGPYRRAKSEVSESRQGRSSSTGHEEESLAVLRRHVMNELLDTERVYVEELLCVLEGYAAELDNPLMAHLMSPGLQNKKDILFGNMEEIYHFHNRIFLRELEEYTDCPELVGRCFLERMEEFQIYEKYCQNKPRSESLWRQCSDCPFFQECQRKLDHKLSLDSYLLKPVQRITKYQLLLKEMLKYSKSCEGAEDLQEALSSILGILKAVNDSMHLIAITGYDGNLSDLGKLLMQGSFSVWTDHKKGHSKVKDLARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMAAVGITENVKGDVRKFEIWYNAREEVYIVQAPTAEVKAAWVSEIRKVLTSQLQACREASQHRTLEQSQSLPLPTPPSTSPSKGTTRNIKKLEERKTDPLSLEGYMSPSSLLKPPEKGRGWSKTSHPLEAPEDNDGWSSAEELMNSSDAEEEGRVGPRKLVPGKYTVVVDDEKGSPEALAVRNGDMVEVVQEGDEGLW
SIO_010081: MCF2L
subclass of: SO_0000673
so part of: MCF2L
location: complement(join(909705..909821,910740..910861,914899..915017,915681..915747,915864..915942,916848..916940,917185..917406,918094..918219,918388..918480,918564..918656,919681..919750,920872..920987,921613..921679,922160..922236,922406..922476,923135..923294,923776..923967,924366..924557,924769..924888,928065..928179,929277..929401,930030..930179,930682..930798,933239..933358,941810..941900,958334..958448,961155..961238,989387..989489))
location: region:909705-989489:-1
so has part: feature:989387-989489:-1:exon
so has part: feature:961155-961238:-1:exon
so has part: feature:958334-958448:-1:exon
so has part: feature:941810-941900:-1:exon
so has part: feature:933239-933358:-1:exon
so has part: feature:930682-930798:-1:exon
so has part: feature:930030-930179:-1:exon
so has part: feature:929277-929401:-1:exon
so has part: feature:928065-928179:-1:exon
so has part: feature:924769-924888:-1:exon
so has part: feature:924366-924557:-1:exon
so has part: feature:923776-923967:-1:exon
so has part: feature:923135-923294:-1:exon
so has part: feature:922406-922476:-1:exon
so has part: feature:922160-922236:-1:exon
so has part: feature:921613-921679:-1:exon
so has part: feature:920872-920987:-1:exon
so has part: feature:919681-919750:-1:exon
so has part: feature:918564-918656:-1:exon
so has part: feature:918388-918480:-1:exon
so has part: feature:918094-918219:-1:exon
so has part: feature:917185-917406:-1:exon
so has part: feature:916848-916940:-1:exon
so has part: feature:915864-915942:-1:exon
so has part: feature:915681-915747:-1:exon
so has part: feature:914899-915017:-1:exon
so has part: feature:910740-910861:-1:exon
so has part: feature:909705-909821:-1:exon

XP_041586882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:989387-989489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961155-961238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958334-958448:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:941810-941900:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:933239-933358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:930682-930798:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930030-930179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:929277-929401:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:928065-928179:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924769-924888:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:924366-924557:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:923776-923967:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:923135-923294:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:922406-922476:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922160-922236:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:921613-921679:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:920872-920987:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:919681-919750:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:918564-918656:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:918388-918480:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:918094-918219:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:917185-917406:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:916848-916940:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:915864-915942:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:915681-915747:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:914899-915017:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:910740-910861:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:909705-909821:-1:exon

MCF2L
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 494514
gene: MCF2L
product: MCF.2 cell line derived transforming sequence like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005984046.1
SIO_010081: MCF2L
so part of: MCF2L
location: complement(join(909709..909821,910740..910861,915681..915747,915864..915942,916848..916940,917185..917406,918094..918219,918388..918480,918564..918656,919681..919750,920872..920987,921613..921679,922160..922236,922406..922476,923135..923294,923776..923967,924366..924557,924769..924888,928065..928179,929277..929401,930030..930179,930682..930798,933239..933358,941810..941900,958334..958448,959917..959967,961155..961238,989387..989991))
location: region:909709-989991:-1
so has part: feature:989387-989991:-1:exon
so has part: feature:961155-961238:-1:exon
so has part: feature:959917-959967:-1:exon
so has part: feature:958334-958448:-1:exon
so has part: feature:941810-941900:-1:exon
so has part: feature:933239-933358:-1:exon
so has part: feature:930682-930798:-1:exon
so has part: feature:930030-930179:-1:exon
so has part: feature:929277-929401:-1:exon
so has part: feature:928065-928179:-1:exon
so has part: feature:924769-924888:-1:exon
so has part: feature:924366-924557:-1:exon
so has part: feature:923776-923967:-1:exon
so has part: feature:923135-923294:-1:exon
so has part: feature:922406-922476:-1:exon
so has part: feature:922160-922236:-1:exon
so has part: feature:921613-921679:-1:exon
so has part: feature:920872-920987:-1:exon
so has part: feature:919681-919750:-1:exon
so has part: feature:918564-918656:-1:exon
so has part: feature:918388-918480:-1:exon
so has part: feature:918094-918219:-1:exon
so has part: feature:917185-917406:-1:exon
so has part: feature:916848-916940:-1:exon
so has part: feature:915864-915942:-1:exon
so has part: feature:915681-915747:-1:exon
so has part: feature:910740-910861:-1:exon
so has part: feature:909709-909821:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:989387-989991:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961155-961238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:959917-959967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958334-958448:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:941810-941900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:933239-933358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930682-930798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930030-930179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:929277-929401:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:928065-928179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:924769-924888:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:924366-924557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:923776-923967:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:923135-923294:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922406-922476:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:922160-922236:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:921613-921679:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:920872-920987:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:919681-919750:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:918564-918656:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:918388-918480:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:918094-918219:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:917185-917406:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:916848-916940:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:915864-915942:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:915681-915747:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:910740-910861:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:909709-909821:-1:exon

MCF2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: MCF2L
product: MCF.2 cell line derived transforming sequence like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041730945.1
SIO_010081: MCF2L
subclass of: SO_0000673
so part of: MCF2L
location: complement(join(910676..910861,915681..915747,915864..915942,916848..916940,917185..917406,918094..918219,918388..918480,918564..918656,919681..919750,920872..920987,921613..921679,922160..922236,922406..922476,923135..923294,923776..923967,924366..924557,924769..924888,928065..928179,929277..929401,930030..930179,930682..930798,933239..933358,941810..941900,958334..958448,959917..959967,961155..961238,989387..989992))
location: region:910676-989992:-1
so has part: feature:989387-989992:-1:exon
so has part: feature:961155-961238:-1:exon
so has part: feature:959917-959967:-1:exon
so has part: feature:958334-958448:-1:exon
so has part: feature:941810-941900:-1:exon
so has part: feature:933239-933358:-1:exon
so has part: feature:930682-930798:-1:exon
so has part: feature:930030-930179:-1:exon
so has part: feature:929277-929401:-1:exon
so has part: feature:928065-928179:-1:exon
so has part: feature:924769-924888:-1:exon
so has part: feature:924366-924557:-1:exon
so has part: feature:923776-923967:-1:exon
so has part: feature:923135-923294:-1:exon
so has part: feature:922406-922476:-1:exon
so has part: feature:922160-922236:-1:exon
so has part: feature:921613-921679:-1:exon
so has part: feature:920872-920987:-1:exon
so has part: feature:919681-919750:-1:exon
so has part: feature:918564-918656:-1:exon
so has part: feature:918388-918480:-1:exon
so has part: feature:918094-918219:-1:exon
so has part: feature:917185-917406:-1:exon
so has part: feature:916848-916940:-1:exon
so has part: feature:915864-915942:-1:exon
so has part: feature:915681-915747:-1:exon
so has part: feature:910676-910861:-1:exon

position:910676:-1
position: 910676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989992:-1
position: 989992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:989387-989992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961155-961238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:959917-959967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958334-958448:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:941810-941900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:933239-933358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930682-930798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930030-930179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:929277-929401:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:928065-928179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:924769-924888:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:924366-924557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:923776-923967:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:923135-923294:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922406-922476:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:922160-922236:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:921613-921679:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:920872-920987:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:919681-919750:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:918564-918656:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:918388-918480:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:918094-918219:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:917185-917406:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:916848-916940:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:915864-915942:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:915681-915747:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:910676-910861:-1:exon

MCF2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: MCF2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide exchange factor DBS isoform X5
translation: MAERGASRGTLRGLLRRLLPRPLRCSGASTHPQPDEIMHQDITPLCAADIQDQLKKRFAYLSGFLHMGIWLSDSEDPSQGGRGQDGSPVITFPDYPAFSDVPDKEFQNVMTYLTSIPSLQDAGIGFILVIDRRQDKWTSVKASILRIAASFPANLQLVLVLRPTGFFQRALSDLAFKFNRDDLKMKVPVIMLSSVPELHGYIDKSQLTEDLGGTLDYCHTRWLCHRTAIESFALMVKQTAQMLQSFGTELAETELPNDVQSTSSVLCAHTEKKDKAKEDMRLALDEGQSILENIREPLAKSGEQSLNQDELDNQTTVQRLLAQLNETEAAFDEFWAKHQQKLQQCLQLRHFEQDFREVKSSLDALAQKIATFTDVGNSLAHAEHLLKDLASFEEKSSASVKRAHTLSLEGEKLIDTKHYAVDSIRPKCHELQYLCDQFAAEVERRRGLLSKSLELHGLLEASMKWCDEGIYLLASQPVDKCQSQDGAEAALQEIEKFLETGAENKIQELNKIYQDYESILTKDLMEHVQKVFQKQEGMEEMFHRRQASLKKLAAKQMRPVQPVAPRPEALTKSPCPSPGSRRGSENSSEGSTLRRGPYRRAKSEVSESRQGRSSSTGHEEESLAVLRRHVMNELLDTERVYVEELLCVLEGYAAELDNPLMAHLMSPGLQNKKDILFGNMEEIYHFHNRIFLRELEEYTDCPELVGRCFLERMEEFQIYEKYCQNKPRSESLWRQCSDCPFFQECQRKLDHKLSLDSYLLKPVQRITKYQLLLKEMLKYSKSCEGAEDLQEALSSILGILKAVNDSMHLIAITGYDGNLSDLGKLLMQGSFSVWTDHKKGHSKVKDLARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMAAVGITENVKGDVRKFEIWYNAREEVYIVQAPTAEVKAAWVSEIRKVLTSQLQACREASQHRTLEQSQSLPLPTPPSTRLEQNISPLGGP
SIO_010081: MCF2L
subclass of: SO_0000673
so part of: MCF2L
location: complement(join(910825..910861,915681..915747,915864..915942,916848..916940,917185..917406,918094..918219,918388..918480,918564..918656,919681..919750,920872..920987,921613..921679,922160..922236,922406..922476,923135..923294,923776..923967,924366..924557,924769..924888,928065..928179,929277..929401,930030..930179,930682..930798,933239..933358,941810..941900,958334..958448,959917..959967,961155..961238,989387..989489))
location: region:910825-989489:-1
so has part: feature:989387-989489:-1:exon
so has part: feature:961155-961238:-1:exon
so has part: feature:959917-959967:-1:exon
so has part: feature:958334-958448:-1:exon
so has part: feature:941810-941900:-1:exon
so has part: feature:933239-933358:-1:exon
so has part: feature:930682-930798:-1:exon
so has part: feature:930030-930179:-1:exon
so has part: feature:929277-929401:-1:exon
so has part: feature:928065-928179:-1:exon
so has part: feature:924769-924888:-1:exon
so has part: feature:924366-924557:-1:exon
so has part: feature:923776-923967:-1:exon
so has part: feature:923135-923294:-1:exon
so has part: feature:922406-922476:-1:exon
so has part: feature:922160-922236:-1:exon
so has part: feature:921613-921679:-1:exon
so has part: feature:920872-920987:-1:exon
so has part: feature:919681-919750:-1:exon
so has part: feature:918564-918656:-1:exon
so has part: feature:918388-918480:-1:exon
so has part: feature:918094-918219:-1:exon
so has part: feature:917185-917406:-1:exon
so has part: feature:916848-916940:-1:exon
so has part: feature:915864-915942:-1:exon
so has part: feature:915681-915747:-1:exon
so has part: feature:910825-910861:-1:exon

XP_041586879.1
type: Protein
SIO_000068: ncbiprotein

position:910825:-1
position: 910825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:989387-989489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961155-961238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:959917-959967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958334-958448:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:941810-941900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:933239-933358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930682-930798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930030-930179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:929277-929401:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:928065-928179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:924769-924888:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:924366-924557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:923776-923967:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:923135-923294:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922406-922476:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:922160-922236:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:921613-921679:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:920872-920987:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:919681-919750:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:918564-918656:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:918388-918480:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:918094-918219:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:917185-917406:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:916848-916940:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:915864-915942:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:915681-915747:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:910825-910861:-1:exon

ATP11A
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: ATP11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1048283..1179232)
location: region:1048283-1179232:-1
so has part: feature:1048283-1179232:-1:exon
subclass of: SO_0000010

121476791
type: Gene
SIO_000068: ncbigene

position:1048283:-1
position: 1048283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179232:-1
position: 1179232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048283-1179232:-1:exon

ATP11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ATP11A
product: ATPase phospholipid transporting 11A, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041730875.1
SIO_010081: ATP11A
subclass of: SO_0000673
so part of: ATP11A
location: complement(join(1048283..1052401,1057296..1057461,1059288..1059391,1060041..1060106,1065524..1065659,1067189..1067316,1068380..1068439,1068925..1069070,1069205..1069307,1071087..1071261,1072763..1073014,1075116..1075297,1082067..1082170,1085521..1085594,1087252..1087323,1088500..1088663,1090455..1090628,1093705..1093855,1094970..1095051,1095666..1095730,1097723..1097773,1098446..1098549,1101082..1101210,1103106..1103213,1106419..1106499,1107252..1107341,1115414..1115536,1178843..1179232))
location: region:1048283-1179232:-1
so has part: feature:1178843-1179232:-1:exon
so has part: feature:1115414-1115536:-1:exon
so has part: feature:1107252-1107341:-1:exon
so has part: feature:1106419-1106499:-1:exon
so has part: feature:1103106-1103213:-1:exon
so has part: feature:1101082-1101210:-1:exon
so has part: feature:1098446-1098549:-1:exon
so has part: feature:1097723-1097773:-1:exon
so has part: feature:1095666-1095730:-1:exon
so has part: feature:1094970-1095051:-1:exon
so has part: feature:1093705-1093855:-1:exon
so has part: feature:1090455-1090628:-1:exon
so has part: feature:1088500-1088663:-1:exon
so has part: feature:1087252-1087323:-1:exon
so has part: feature:1085521-1085594:-1:exon
so has part: feature:1082067-1082170:-1:exon
so has part: feature:1075116-1075297:-1:exon
so has part: feature:1072763-1073014:-1:exon
so has part: feature:1071087-1071261:-1:exon
so has part: feature:1069205-1069307:-1:exon
so has part: feature:1068925-1069070:-1:exon
so has part: feature:1068380-1068439:-1:exon
so has part: feature:1067189-1067316:-1:exon
so has part: feature:1065524-1065659:-1:exon
so has part: feature:1060041-1060106:-1:exon
so has part: feature:1059288-1059391:-1:exon
so has part: feature:1057296-1057461:-1:exon
so has part: feature:1048283-1052401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1178843-1179232:-1:exon

position:1178843:-1
position: 1178843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1115414-1115536:-1:exon

position:1115414:-1
position: 1115414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1115536:-1
position: 1115536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1107252-1107341:-1:exon

position:1107252:-1
position: 1107252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1107341:-1
position: 1107341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1106419-1106499:-1:exon

position:1106419:-1
position: 1106419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106499:-1
position: 1106499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1103106-1103213:-1:exon

position:1103106:-1
position: 1103106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103213:-1
position: 1103213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1101082-1101210:-1:exon

position:1101082:-1
position: 1101082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101210:-1
position: 1101210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1098446-1098549:-1:exon

position:1098446:-1
position: 1098446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1098549:-1
position: 1098549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1097723-1097773:-1:exon

position:1097723:-1
position: 1097723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097773:-1
position: 1097773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1095666-1095730:-1:exon

position:1095666:-1
position: 1095666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095730:-1
position: 1095730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1094970-1095051:-1:exon

position:1094970:-1
position: 1094970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095051:-1
position: 1095051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1093705-1093855:-1:exon

position:1093705:-1
position: 1093705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093855:-1
position: 1093855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1090455-1090628:-1:exon

position:1090455:-1
position: 1090455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090628:-1
position: 1090628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1088500-1088663:-1:exon

position:1088500:-1
position: 1088500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088663:-1
position: 1088663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1087252-1087323:-1:exon

position:1087252:-1
position: 1087252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087323:-1
position: 1087323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1085521-1085594:-1:exon

position:1085521:-1
position: 1085521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085594:-1
position: 1085594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1082067-1082170:-1:exon

position:1082067:-1
position: 1082067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1082170:-1
position: 1082170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1075116-1075297:-1:exon

position:1075116:-1
position: 1075116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075297:-1
position: 1075297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1072763-1073014:-1:exon

position:1072763:-1
position: 1072763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073014:-1
position: 1073014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1071087-1071261:-1:exon

position:1071087:-1
position: 1071087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071261:-1
position: 1071261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1069205-1069307:-1:exon

position:1069205:-1
position: 1069205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069307:-1
position: 1069307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1068925-1069070:-1:exon

position:1068925:-1
position: 1068925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069070:-1
position: 1069070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1068380-1068439:-1:exon

position:1068380:-1
position: 1068380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068439:-1
position: 1068439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1067189-1067316:-1:exon

position:1067189:-1
position: 1067189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067316:-1
position: 1067316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1065524-1065659:-1:exon

position:1065524:-1
position: 1065524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065659:-1
position: 1065659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1060041-1060106:-1:exon

position:1060041:-1
position: 1060041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060106:-1
position: 1060106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1059288-1059391:-1:exon

position:1059288:-1
position: 1059288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059391:-1
position: 1059391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1057296-1057461:-1:exon

position:1057296:-1
position: 1057296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1057461:-1
position: 1057461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1048283-1052401:-1:exon

position:1052401:-1
position: 1052401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ATP11A
product: ATPase phospholipid transporting 11A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041730873.1
SIO_010081: ATP11A
subclass of: SO_0000673
so part of: ATP11A
location: complement(join(1048283..1052401,1053418..1053517,1057296..1057461,1059288..1059391,1060041..1060106,1065524..1065659,1067189..1067316,1068380..1068439,1068925..1069070,1069205..1069307,1071087..1071261,1072763..1073014,1075116..1075297,1082067..1082170,1085521..1085594,1087252..1087323,1088500..1088663,1090455..1090628,1092726..1092923,1093705..1093855,1094970..1095051,1095666..1095730,1097723..1097773,1098446..1098549,1101082..1101210,1103106..1103213,1106419..1106499,1107252..1107341,1115414..1115536,1178843..1179232))
location: region:1048283-1179232:-1
so has part: feature:1178843-1179232:-1:exon
so has part: feature:1115414-1115536:-1:exon
so has part: feature:1107252-1107341:-1:exon
so has part: feature:1106419-1106499:-1:exon
so has part: feature:1103106-1103213:-1:exon
so has part: feature:1101082-1101210:-1:exon
so has part: feature:1098446-1098549:-1:exon
so has part: feature:1097723-1097773:-1:exon
so has part: feature:1095666-1095730:-1:exon
so has part: feature:1094970-1095051:-1:exon
so has part: feature:1093705-1093855:-1:exon
so has part: feature:1092726-1092923:-1:exon
so has part: feature:1090455-1090628:-1:exon
so has part: feature:1088500-1088663:-1:exon
so has part: feature:1087252-1087323:-1:exon
so has part: feature:1085521-1085594:-1:exon
so has part: feature:1082067-1082170:-1:exon
so has part: feature:1075116-1075297:-1:exon
so has part: feature:1072763-1073014:-1:exon
so has part: feature:1071087-1071261:-1:exon
so has part: feature:1069205-1069307:-1:exon
so has part: feature:1068925-1069070:-1:exon
so has part: feature:1068380-1068439:-1:exon
so has part: feature:1067189-1067316:-1:exon
so has part: feature:1065524-1065659:-1:exon
so has part: feature:1060041-1060106:-1:exon
so has part: feature:1059288-1059391:-1:exon
so has part: feature:1057296-1057461:-1:exon
so has part: feature:1053418-1053517:-1:exon
so has part: feature:1048283-1052401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1178843-1179232:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115414-1115536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107252-1107341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106419-1106499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1103106-1103213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1101082-1101210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1098446-1098549:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1097723-1097773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1095666-1095730:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1094970-1095051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1093705-1093855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1092726-1092923:-1:exon

position:1092726:-1
position: 1092726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092923:-1
position: 1092923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1090455-1090628:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1088500-1088663:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1087252-1087323:-1:exon

urn:…
SIO_000300: 16
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position:1053418:-1
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position:1053517:-1
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ATP11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ATP11A
product: ATPase phospholipid transporting 11A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041730872.1
SIO_010081: ATP11A
subclass of: SO_0000673
so part of: ATP11A
location: complement(join(1048283..1053517,1057296..1057461,1059288..1059391,1060041..1060106,1065524..1065659,1067189..1067316,1068380..1068439,1068925..1069070,1069205..1069307,1071087..1071261,1072763..1073014,1075116..1075297,1082067..1082170,1085521..1085594,1087252..1087323,1088500..1088663,1090455..1090628,1092726..1092923,1093705..1093855,1094970..1095051,1095666..1095730,1097723..1097773,1098446..1098549,1101082..1101210,1103106..1103213,1106419..1106499,1107252..1107341,1115414..1115536,1178843..1179232))
location: region:1048283-1179232:-1
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ATP11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ATP11A
product: ATPase phospholipid transporting 11A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041730871.1
SIO_010081: ATP11A
subclass of: SO_0000673
so part of: ATP11A
location: complement(join(1048283..1052401,1053418..1053520,1057296..1057461,1059288..1059391,1060041..1060106,1065524..1065659,1067189..1067316,1068380..1068439,1068925..1069070,1069205..1069307,1071087..1071261,1072763..1073014,1075116..1075297,1082067..1082170,1085521..1085594,1087252..1087323,1088500..1088663,1090455..1090628,1092726..1092923,1093705..1093855,1094970..1095051,1095666..1095730,1097723..1097773,1098446..1098549,1101082..1101210,1103106..1103213,1106419..1106499,1107252..1107341,1115414..1115536,1178843..1179232))
location: region:1048283-1179232:-1
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position:1053520:-1
position: 1053520
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type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1048283-1052401:-1:exon

ATP11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ATP11A
product: ATPase phospholipid transporting 11A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041730870.1
SIO_010081: ATP11A
subclass of: SO_0000673
so part of: ATP11A
location: complement(join(1048283..1053520,1057296..1057461,1059288..1059391,1060041..1060106,1065524..1065659,1067189..1067316,1068380..1068439,1068925..1069070,1069205..1069307,1071087..1071261,1072763..1073014,1075116..1075297,1082067..1082170,1085521..1085594,1087252..1087323,1088500..1088663,1090455..1090628,1092726..1092923,1093705..1093855,1094970..1095051,1095666..1095730,1097723..1097773,1098446..1098549,1101082..1101210,1103106..1103213,1106419..1106499,1107252..1107341,1115414..1115536,1178843..1179232))
location: region:1048283-1179232:-1
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ATP11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ATP11A
product: ATPase phospholipid transporting 11A, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041730874.1
SIO_010081: ATP11A
subclass of: SO_0000673
so part of: ATP11A
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location: region:1048283-1179232:-1
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SIO_000628: feature:1093705-1093855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1092726-1092923:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1090455-1090628:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1088500-1088663:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1087252-1087323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1085521-1085594:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1082067-1082170:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1075116-1075297:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1072763-1073014:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1071087-1071261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1069205-1069307:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1068925-1069070:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1068380-1068439:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1067189-1067316:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1065524-1065659:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1060041-1060106:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1059288-1059391:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1057296-1057461:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1055595-1055681:-1:exon

position:1055595:-1
position: 1055595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1055681:-1
position: 1055681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1048283-1052401:-1:exon

ATP11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ATP11A
product: ATPase phospholipid transporting 11A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041730869.1
SIO_010081: ATP11A
subclass of: SO_0000673
so part of: ATP11A
location: complement(join(1048283..1052401,1057296..1057461,1059288..1059391,1060041..1060106,1065524..1065659,1067189..1067316,1068380..1068439,1068925..1069070,1069205..1069307,1071087..1071261,1072763..1073014,1075116..1075297,1082067..1082170,1085521..1085594,1087252..1087323,1088500..1088663,1090455..1090628,1092726..1092923,1093705..1093855,1094970..1095051,1095666..1095730,1097723..1097773,1098446..1098549,1101082..1101210,1103106..1103213,1106419..1106499,1107252..1107341,1115414..1115536,1178843..1179231))
location: region:1048283-1179231:-1
so has part: feature:1178843-1179231:-1:exon
so has part: feature:1115414-1115536:-1:exon
so has part: feature:1107252-1107341:-1:exon
so has part: feature:1106419-1106499:-1:exon
so has part: feature:1103106-1103213:-1:exon
so has part: feature:1101082-1101210:-1:exon
so has part: feature:1098446-1098549:-1:exon
so has part: feature:1097723-1097773:-1:exon
so has part: feature:1095666-1095730:-1:exon
so has part: feature:1094970-1095051:-1:exon
so has part: feature:1093705-1093855:-1:exon
so has part: feature:1092726-1092923:-1:exon
so has part: feature:1090455-1090628:-1:exon
so has part: feature:1088500-1088663:-1:exon
so has part: feature:1087252-1087323:-1:exon
so has part: feature:1085521-1085594:-1:exon
so has part: feature:1082067-1082170:-1:exon
so has part: feature:1075116-1075297:-1:exon
so has part: feature:1072763-1073014:-1:exon
so has part: feature:1071087-1071261:-1:exon
so has part: feature:1069205-1069307:-1:exon
so has part: feature:1068925-1069070:-1:exon
so has part: feature:1068380-1068439:-1:exon
so has part: feature:1067189-1067316:-1:exon
so has part: feature:1065524-1065659:-1:exon
so has part: feature:1060041-1060106:-1:exon
so has part: feature:1059288-1059391:-1:exon
so has part: feature:1057296-1057461:-1:exon
so has part: feature:1048283-1052401:-1:exon

position:1179231:-1
position: 1179231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178843-1179231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115414-1115536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107252-1107341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106419-1106499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1103106-1103213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1101082-1101210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1098446-1098549:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1097723-1097773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1095666-1095730:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1094970-1095051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1093705-1093855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1092726-1092923:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1090455-1090628:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1088500-1088663:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1087252-1087323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1085521-1085594:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1082067-1082170:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1075116-1075297:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1072763-1073014:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1071087-1071261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1069205-1069307:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1068925-1069070:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1068380-1068439:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1067189-1067316:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1065524-1065659:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1060041-1060106:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1059288-1059391:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1057296-1057461:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1048283-1052401:-1:exon

ATP11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ATP11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IH isoform X5
translation: MDCSLARTLVRRYCAGEENWVDSRTIYVGHKEPPPGAEAYILQRHPDNRIVSSKYTFWNFIPKNLFEQFRRIANFYFLIIFLVQLIIDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQSRKLRVGDIVMVKEDETFPCDLIFLSSSRGDGTCHVTTASLDGESSHKTHYAVQDTKGFHTEEDIDGLHATIECEQPQPDLYKFVGRINVYNDRNDPVVRPLGSENLLLRGATLKNTEKIFGVAIYTGMETKMALNYQSKSQKRSAVEKSMNVFLIVYLCILISKALINTVLKYVWQSEPFRDEPWYNQKTESERQRNLVEYIFTDKTGTLTENNMEFKECCIEGHVYVPHAICNGQVLPGASGIDMIDSSPGTSAREREELFFRALCLCHTIQVKDDDDVDGPRKSPDSGKSCTYISSSPDEVALVEGIQRLGFTYLRLKDNYMEILNRENDMERFELLEILSFDSVRRRMSVIVKSATGEIYLFCKGADSSIFPRVIEGKVDQIRARVERNAVEGLRTLCVAYKRLNPEEYEGICMLLQAAKVALQDREKKLAEAYEQIEKDLVLLGATAVEDRLQEKAADTIEALQKAGIKVWVLTGDKMETAAATCYACKLFRRNTQLLELTTKKIEEQSLHDVLFELSKTVLRHSGSLTRDNFSGLSADMQDYGLIIDGAALSLIMKPREDGSCGNYRELFLEICRNCSAVLCCRMAPLQKAQIVKLIKLSKEHPITLAIGDGANDVSMILEAHVGIGVIGKEGRQAARNSDYAVPKFKHLKKMLLVHGHFYYIRISELVQYFFYKNVCFIFPQFLYQFFCGFSQQTLYDTAYLTLYNISFTSLPILLYSLMEQHVSIDTLRRDPSLYRDIAKNALLRWRVFIYWTFLGVFDALVFFFGAYFMFENTTVTSNGQIFGNWTFGTLVFTVMVFTVTLKLALDTHYWTWINHFVIWGSLLFYIVFSLLWGGIIWPFLNYQRMYYVFIQMLSSGPAWLVIILLITVSLLPDVLKKVLCRQLWPSATERVQSTCMCGHDHLPELTLLACPQSPSPWAMFQARTQNR
SIO_010081: ATP11A
subclass of: SO_0000673
so part of: ATP11A
location: complement(join(1052294..1052401,1057296..1057461,1059288..1059391,1060041..1060106,1065524..1065659,1067189..1067316,1068380..1068439,1068925..1069070,1069205..1069307,1071087..1071261,1072763..1073014,1075116..1075297,1082067..1082170,1085521..1085594,1087252..1087323,1088500..1088663,1090455..1090628,1093705..1093855,1094970..1095051,1095666..1095730,1097723..1097773,1098446..1098549,1101082..1101210,1103106..1103213,1106419..1106499,1107252..1107341,1115414..1115536,1178843..1178881))
location: region:1052294-1178881:-1
so has part: feature:1178843-1178881:-1:exon
so has part: feature:1115414-1115536:-1:exon
so has part: feature:1107252-1107341:-1:exon
so has part: feature:1106419-1106499:-1:exon
so has part: feature:1103106-1103213:-1:exon
so has part: feature:1101082-1101210:-1:exon
so has part: feature:1098446-1098549:-1:exon
so has part: feature:1097723-1097773:-1:exon
so has part: feature:1095666-1095730:-1:exon
so has part: feature:1094970-1095051:-1:exon
so has part: feature:1093705-1093855:-1:exon
so has part: feature:1090455-1090628:-1:exon
so has part: feature:1088500-1088663:-1:exon
so has part: feature:1087252-1087323:-1:exon
so has part: feature:1085521-1085594:-1:exon
so has part: feature:1082067-1082170:-1:exon
so has part: feature:1075116-1075297:-1:exon
so has part: feature:1072763-1073014:-1:exon
so has part: feature:1071087-1071261:-1:exon
so has part: feature:1069205-1069307:-1:exon
so has part: feature:1068925-1069070:-1:exon
so has part: feature:1068380-1068439:-1:exon
so has part: feature:1067189-1067316:-1:exon
so has part: feature:1065524-1065659:-1:exon
so has part: feature:1060041-1060106:-1:exon
so has part: feature:1059288-1059391:-1:exon
so has part: feature:1057296-1057461:-1:exon
so has part: feature:1052294-1052401:-1:exon

XP_041586809.1
type: Protein
SIO_000068: ncbiprotein

position:1052294:-1
position: 1052294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1178881:-1
position: 1178881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178843-1178881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115414-1115536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107252-1107341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106419-1106499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1103106-1103213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1101082-1101210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1098446-1098549:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1097723-1097773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1095666-1095730:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1094970-1095051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1093705-1093855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1090455-1090628:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1088500-1088663:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1087252-1087323:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1085521-1085594:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1082067-1082170:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1075116-1075297:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1072763-1073014:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1071087-1071261:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1069205-1069307:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1068925-1069070:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1068380-1068439:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1067189-1067316:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1065524-1065659:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1060041-1060106:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1059288-1059391:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1057296-1057461:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1052294-1052401:-1:exon

ATP11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ATP11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IH isoform X1
translation: MDCSLARTLVRRYCAGEENWVDSRTIYVGHKEPPPGAEAYILQRHPDNRIVSSKYTFWNFIPKNLFEQFRRIANFYFLIIFLVQLIIDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQSRKLRVGDIVMVKEDETFPCDLIFLSSSRGDGTCHVTTASLDGESSHKTHYAVQDTKGFHTEEDIDGLHATIECEQPQPDLYKFVGRINVYNDRNDPVVRPLGSENLLLRGATLKNTEKIFGVAIYTGMETKMALNYQSKSQKRSAVEKSMNVFLIVYLCILISKALINTVLKYVWQSEPFRDEPWYNQKTESERQRNLFLRAFTDFLAFMVLFNYIIPVSMYVTVEMQKFLGSYFITWDEEMFDEDSGEGPLVNTSDLNEELGQVEYIFTDKTGTLTENNMEFKECCIEGHVYVPHAICNGQVLPGASGIDMIDSSPGTSAREREELFFRALCLCHTIQVKDDDDVDGPRKSPDSGKSCTYISSSPDEVALVEGIQRLGFTYLRLKDNYMEILNRENDMERFELLEILSFDSVRRRMSVIVKSATGEIYLFCKGADSSIFPRVIEGKVDQIRARVERNAVEGLRTLCVAYKRLNPEEYEGICMLLQAAKVALQDREKKLAEAYEQIEKDLVLLGATAVEDRLQEKAADTIEALQKAGIKVWVLTGDKMETAAATCYACKLFRRNTQLLELTTKKIEEQSLHDVLFELSKTVLRHSGSLTRDNFSGLSADMQDYGLIIDGAALSLIMKPREDGSCGNYRELFLEICRNCSAVLCCRMAPLQKAQIVKLIKLSKEHPITLAIGDGANDVSMILEAHVGIGVIGKEGRQAARNSDYAVPKFKHLKKMLLVHGHFYYIRISELVQYFFYKNVCFIFPQFLYQFFCGFSQQTLYDTAYLTLYNISFTSLPILLYSLMEQHVSIDTLRRDPSLYRDIAKNALLRWRVFIYWTFLGVFDALVFFFGAYFMFENTTVTSNGQIFGNWTFGTLVFTVMVFTVTLKLALDTHYWTWINHFVIWGSLLFYIVFSLLWGGIIWPFLNYQRMYYVFIQMLSSGPAWLVIILLITVSLLPDVLKKVLCRQLWPSATERVQSTCMCGHDHLPELTLLACPQSPSPWAMFQARTQNR
SIO_010081: ATP11A
subclass of: SO_0000673
so part of: ATP11A
location: complement(join(1052294..1052401,1057296..1057461,1059288..1059391,1060041..1060106,1065524..1065659,1067189..1067316,1068380..1068439,1068925..1069070,1069205..1069307,1071087..1071261,1072763..1073014,1075116..1075297,1082067..1082170,1085521..1085594,1087252..1087323,1088500..1088663,1090455..1090628,1092726..1092923,1093705..1093855,1094970..1095051,1095666..1095730,1097723..1097773,1098446..1098549,1101082..1101210,1103106..1103213,1106419..1106499,1107252..1107341,1115414..1115536,1178843..1178881))
location: region:1052294-1178881:-1
so has part: feature:1178843-1178881:-1:exon
so has part: feature:1115414-1115536:-1:exon
so has part: feature:1107252-1107341:-1:exon
so has part: feature:1106419-1106499:-1:exon
so has part: feature:1103106-1103213:-1:exon
so has part: feature:1101082-1101210:-1:exon
so has part: feature:1098446-1098549:-1:exon
so has part: feature:1097723-1097773:-1:exon
so has part: feature:1095666-1095730:-1:exon
so has part: feature:1094970-1095051:-1:exon
so has part: feature:1093705-1093855:-1:exon
so has part: feature:1092726-1092923:-1:exon
so has part: feature:1090455-1090628:-1:exon
so has part: feature:1088500-1088663:-1:exon
so has part: feature:1087252-1087323:-1:exon
so has part: feature:1085521-1085594:-1:exon
so has part: feature:1082067-1082170:-1:exon
so has part: feature:1075116-1075297:-1:exon
so has part: feature:1072763-1073014:-1:exon
so has part: feature:1071087-1071261:-1:exon
so has part: feature:1069205-1069307:-1:exon
so has part: feature:1068925-1069070:-1:exon
so has part: feature:1068380-1068439:-1:exon
so has part: feature:1067189-1067316:-1:exon
so has part: feature:1065524-1065659:-1:exon
so has part: feature:1060041-1060106:-1:exon
so has part: feature:1059288-1059391:-1:exon
so has part: feature:1057296-1057461:-1:exon
so has part: feature:1052294-1052401:-1:exon

XP_041586803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1178843-1178881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115414-1115536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107252-1107341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106419-1106499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1103106-1103213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1101082-1101210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1098446-1098549:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1097723-1097773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1095666-1095730:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1094970-1095051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1093705-1093855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1092726-1092923:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1090455-1090628:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1088500-1088663:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1087252-1087323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1085521-1085594:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1082067-1082170:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1075116-1075297:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1072763-1073014:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1071087-1071261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1069205-1069307:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1068925-1069070:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1068380-1068439:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1067189-1067316:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1065524-1065659:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1060041-1060106:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1059288-1059391:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1057296-1057461:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1052294-1052401:-1:exon

ATP11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ATP11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IH isoform X3
translation: MDCSLARTLVRRYCAGEENWVDSRTIYVGHKEPPPGAEAYILQRHPDNRIVSSKYTFWNFIPKNLFEQFRRIANFYFLIIFLVQLIIDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQSRKLRVGDIVMVKEDETFPCDLIFLSSSRGDGTCHVTTASLDGESSHKTHYAVQDTKGFHTEEDIDGLHATIECEQPQPDLYKFVGRINVYNDRNDPVVRPLGSENLLLRGATLKNTEKIFGVAIYTGMETKMALNYQSKSQKRSAVEKSMNVFLIVYLCILISKALINTVLKYVWQSEPFRDEPWYNQKTESERQRNLFLRAFTDFLAFMVLFNYIIPVSMYVTVEMQKFLGSYFITWDEEMFDEDSGEGPLVNTSDLNEELGQVEYIFTDKTGTLTENNMEFKECCIEGHVYVPHAICNGQVLPGASGIDMIDSSPGTSAREREELFFRALCLCHTIQVKDDDDVDGPRKSPDSGKSCTYISSSPDEVALVEGIQRLGFTYLRLKDNYMEILNRENDMERFELLEILSFDSVRRRMSVIVKSATGEIYLFCKGADSSIFPRVIEGKVDQIRARVERNAVEGLRTLCVAYKRLNPEEYEGICMLLQAAKVALQDREKKLAEAYEQIEKDLVLLGATAVEDRLQEKAADTIEALQKAGIKVWVLTGDKMETAAATCYACKLFRRNTQLLELTTKKIEEQSLHDVLFELSKTVLRHSGSLTRDNFSGLSADMQDYGLIIDGAALSLIMKPREDGSCGNYRELFLEICRNCSAVLCCRMAPLQKAQIVKLIKLSKEHPITLAIGDGANDVSMILEAHVGIGVIGKEGRQAARNSDYAVPKFKHLKKMLLVHGHFYYIRISELVQYFFYKNVCFIFPQFLYQFFCGFSQQTLYDTAYLTLYNISFTSLPILLYSLMEQHVSIDTLRRDPSLYRDIAKNALLRWRVFIYWTFLGVFDALVFFFGAYFMFENTTVTSNGQIFGNWTFGTLVFTVMVFTVTLKLALDTHYWTWINHFVIWGSLLFYIVFSLLWGGIIWPFLNYQRMYYVFIQMLSSGPAWLVIILLITVSLLPDVLKKVLCRQLWPSATERVQSTKLKASVAAAPSMDGPLLKDLLPRPRRH
SIO_010081: ATP11A
subclass of: SO_0000673
so part of: ATP11A
location: complement(join(1053428..1053517,1057296..1057461,1059288..1059391,1060041..1060106,1065524..1065659,1067189..1067316,1068380..1068439,1068925..1069070,1069205..1069307,1071087..1071261,1072763..1073014,1075116..1075297,1082067..1082170,1085521..1085594,1087252..1087323,1088500..1088663,1090455..1090628,1092726..1092923,1093705..1093855,1094970..1095051,1095666..1095730,1097723..1097773,1098446..1098549,1101082..1101210,1103106..1103213,1106419..1106499,1107252..1107341,1115414..1115536,1178843..1178881))
location: region:1053428-1178881:-1
so has part: feature:1178843-1178881:-1:exon
so has part: feature:1115414-1115536:-1:exon
so has part: feature:1107252-1107341:-1:exon
so has part: feature:1106419-1106499:-1:exon
so has part: feature:1103106-1103213:-1:exon
so has part: feature:1101082-1101210:-1:exon
so has part: feature:1098446-1098549:-1:exon
so has part: feature:1097723-1097773:-1:exon
so has part: feature:1095666-1095730:-1:exon
so has part: feature:1094970-1095051:-1:exon
so has part: feature:1093705-1093855:-1:exon
so has part: feature:1092726-1092923:-1:exon
so has part: feature:1090455-1090628:-1:exon
so has part: feature:1088500-1088663:-1:exon
so has part: feature:1087252-1087323:-1:exon
so has part: feature:1085521-1085594:-1:exon
so has part: feature:1082067-1082170:-1:exon
so has part: feature:1075116-1075297:-1:exon
so has part: feature:1072763-1073014:-1:exon
so has part: feature:1071087-1071261:-1:exon
so has part: feature:1069205-1069307:-1:exon
so has part: feature:1068925-1069070:-1:exon
so has part: feature:1068380-1068439:-1:exon
so has part: feature:1067189-1067316:-1:exon
so has part: feature:1065524-1065659:-1:exon
so has part: feature:1060041-1060106:-1:exon
so has part: feature:1059288-1059391:-1:exon
so has part: feature:1057296-1057461:-1:exon
so has part: feature:1053428-1053517:-1:exon

XP_041586806.1
type: Protein
SIO_000068: ncbiprotein

position:1053428:-1
position: 1053428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178843-1178881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115414-1115536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107252-1107341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106419-1106499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1103106-1103213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1101082-1101210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1098446-1098549:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1097723-1097773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1095666-1095730:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1094970-1095051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1093705-1093855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1092726-1092923:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1090455-1090628:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1088500-1088663:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1087252-1087323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1085521-1085594:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1082067-1082170:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1075116-1075297:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1072763-1073014:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1071087-1071261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1069205-1069307:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1068925-1069070:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1068380-1068439:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1067189-1067316:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1065524-1065659:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1060041-1060106:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1059288-1059391:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1057296-1057461:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1053428-1053517:-1:exon

ATP11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ATP11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IH isoform X3
translation: MDCSLARTLVRRYCAGEENWVDSRTIYVGHKEPPPGAEAYILQRHPDNRIVSSKYTFWNFIPKNLFEQFRRIANFYFLIIFLVQLIIDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQSRKLRVGDIVMVKEDETFPCDLIFLSSSRGDGTCHVTTASLDGESSHKTHYAVQDTKGFHTEEDIDGLHATIECEQPQPDLYKFVGRINVYNDRNDPVVRPLGSENLLLRGATLKNTEKIFGVAIYTGMETKMALNYQSKSQKRSAVEKSMNVFLIVYLCILISKALINTVLKYVWQSEPFRDEPWYNQKTESERQRNLFLRAFTDFLAFMVLFNYIIPVSMYVTVEMQKFLGSYFITWDEEMFDEDSGEGPLVNTSDLNEELGQVEYIFTDKTGTLTENNMEFKECCIEGHVYVPHAICNGQVLPGASGIDMIDSSPGTSAREREELFFRALCLCHTIQVKDDDDVDGPRKSPDSGKSCTYISSSPDEVALVEGIQRLGFTYLRLKDNYMEILNRENDMERFELLEILSFDSVRRRMSVIVKSATGEIYLFCKGADSSIFPRVIEGKVDQIRARVERNAVEGLRTLCVAYKRLNPEEYEGICMLLQAAKVALQDREKKLAEAYEQIEKDLVLLGATAVEDRLQEKAADTIEALQKAGIKVWVLTGDKMETAAATCYACKLFRRNTQLLELTTKKIEEQSLHDVLFELSKTVLRHSGSLTRDNFSGLSADMQDYGLIIDGAALSLIMKPREDGSCGNYRELFLEICRNCSAVLCCRMAPLQKAQIVKLIKLSKEHPITLAIGDGANDVSMILEAHVGIGVIGKEGRQAARNSDYAVPKFKHLKKMLLVHGHFYYIRISELVQYFFYKNVCFIFPQFLYQFFCGFSQQTLYDTAYLTLYNISFTSLPILLYSLMEQHVSIDTLRRDPSLYRDIAKNALLRWRVFIYWTFLGVFDALVFFFGAYFMFENTTVTSNGQIFGNWTFGTLVFTVMVFTVTLKLALDTHYWTWINHFVIWGSLLFYIVFSLLWGGIIWPFLNYQRMYYVFIQMLSSGPAWLVIILLITVSLLPDVLKKVLCRQLWPSATERVQSTKLKASVAAAPSMDGPLLKDLLPRPRRH
SIO_010081: ATP11A
subclass of: SO_0000673
so part of: ATP11A
location: complement(join(1053428..1053517,1057296..1057461,1059288..1059391,1060041..1060106,1065524..1065659,1067189..1067316,1068380..1068439,1068925..1069070,1069205..1069307,1071087..1071261,1072763..1073014,1075116..1075297,1082067..1082170,1085521..1085594,1087252..1087323,1088500..1088663,1090455..1090628,1092726..1092923,1093705..1093855,1094970..1095051,1095666..1095730,1097723..1097773,1098446..1098549,1101082..1101210,1103106..1103213,1106419..1106499,1107252..1107341,1115414..1115536,1178843..1178881))
location: region:1053428-1178881:-1
so has part: feature:1178843-1178881:-1:exon
so has part: feature:1115414-1115536:-1:exon
so has part: feature:1107252-1107341:-1:exon
so has part: feature:1106419-1106499:-1:exon
so has part: feature:1103106-1103213:-1:exon
so has part: feature:1101082-1101210:-1:exon
so has part: feature:1098446-1098549:-1:exon
so has part: feature:1097723-1097773:-1:exon
so has part: feature:1095666-1095730:-1:exon
so has part: feature:1094970-1095051:-1:exon
so has part: feature:1093705-1093855:-1:exon
so has part: feature:1092726-1092923:-1:exon
so has part: feature:1090455-1090628:-1:exon
so has part: feature:1088500-1088663:-1:exon
so has part: feature:1087252-1087323:-1:exon
so has part: feature:1085521-1085594:-1:exon
so has part: feature:1082067-1082170:-1:exon
so has part: feature:1075116-1075297:-1:exon
so has part: feature:1072763-1073014:-1:exon
so has part: feature:1071087-1071261:-1:exon
so has part: feature:1069205-1069307:-1:exon
so has part: feature:1068925-1069070:-1:exon
so has part: feature:1068380-1068439:-1:exon
so has part: feature:1067189-1067316:-1:exon
so has part: feature:1065524-1065659:-1:exon
so has part: feature:1060041-1060106:-1:exon
so has part: feature:1059288-1059391:-1:exon
so has part: feature:1057296-1057461:-1:exon
so has part: feature:1053428-1053517:-1:exon

XP_041586807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1178843-1178881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115414-1115536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107252-1107341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106419-1106499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1103106-1103213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1101082-1101210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1098446-1098549:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1097723-1097773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1095666-1095730:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1094970-1095051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1093705-1093855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1092726-1092923:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1090455-1090628:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1088500-1088663:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1087252-1087323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1085521-1085594:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1082067-1082170:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1075116-1075297:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1072763-1073014:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1071087-1071261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1069205-1069307:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1068925-1069070:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1068380-1068439:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1067189-1067316:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1065524-1065659:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1060041-1060106:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1059288-1059391:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1057296-1057461:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1053428-1053517:-1:exon

ATP11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ATP11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IH isoform X2
translation: MDCSLARTLVRRYCAGEENWVDSRTIYVGHKEPPPGAEAYILQRHPDNRIVSSKYTFWNFIPKNLFEQFRRIANFYFLIIFLVQLIIDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQSRKLRVGDIVMVKEDETFPCDLIFLSSSRGDGTCHVTTASLDGESSHKTHYAVQDTKGFHTEEDIDGLHATIECEQPQPDLYKFVGRINVYNDRNDPVVRPLGSENLLLRGATLKNTEKIFGVAIYTGMETKMALNYQSKSQKRSAVEKSMNVFLIVYLCILISKALINTVLKYVWQSEPFRDEPWYNQKTESERQRNLFLRAFTDFLAFMVLFNYIIPVSMYVTVEMQKFLGSYFITWDEEMFDEDSGEGPLVNTSDLNEELGQVEYIFTDKTGTLTENNMEFKECCIEGHVYVPHAICNGQVLPGASGIDMIDSSPGTSAREREELFFRALCLCHTIQVKDDDDVDGPRKSPDSGKSCTYISSSPDEVALVEGIQRLGFTYLRLKDNYMEILNRENDMERFELLEILSFDSVRRRMSVIVKSATGEIYLFCKGADSSIFPRVIEGKVDQIRARVERNAVEGLRTLCVAYKRLNPEEYEGICMLLQAAKVALQDREKKLAEAYEQIEKDLVLLGATAVEDRLQEKAADTIEALQKAGIKVWVLTGDKMETAAATCYACKLFRRNTQLLELTTKKIEEQSLHDVLFELSKTVLRHSGSLTRDNFSGLSADMQDYGLIIDGAALSLIMKPREDGSCGNYRELFLEICRNCSAVLCCRMAPLQKAQIVKLIKLSKEHPITLAIGDGANDVSMILEAHVGIGVIGKEGRQAARNSDYAVPKFKHLKKMLLVHGHFYYIRISELVQYFFYKNVCFIFPQFLYQFFCGFSQQTLYDTAYLTLYNISFTSLPILLYSLMEQHVSIDTLRRDPSLYRDIAKNALLRWRVFIYWTFLGVFDALVFFFGAYFMFENTTVTSNGQIFGNWTFGTLVFTVMVFTVTLKLALDTHYWTWINHFVIWGSLLFYIVFSLLWGGIIWPFLNYQRMYYVFIQMLSSGPAWLVIILLITVSLLPDVLKKVLCRQLWPSATERVQQSTKLKASVAAAPSMDGPLLKDLLPRPRRH
SIO_010081: ATP11A
subclass of: SO_0000673
so part of: ATP11A
location: complement(join(1053428..1053520,1057296..1057461,1059288..1059391,1060041..1060106,1065524..1065659,1067189..1067316,1068380..1068439,1068925..1069070,1069205..1069307,1071087..1071261,1072763..1073014,1075116..1075297,1082067..1082170,1085521..1085594,1087252..1087323,1088500..1088663,1090455..1090628,1092726..1092923,1093705..1093855,1094970..1095051,1095666..1095730,1097723..1097773,1098446..1098549,1101082..1101210,1103106..1103213,1106419..1106499,1107252..1107341,1115414..1115536,1178843..1178881))
location: region:1053428-1178881:-1
so has part: feature:1178843-1178881:-1:exon
so has part: feature:1115414-1115536:-1:exon
so has part: feature:1107252-1107341:-1:exon
so has part: feature:1106419-1106499:-1:exon
so has part: feature:1103106-1103213:-1:exon
so has part: feature:1101082-1101210:-1:exon
so has part: feature:1098446-1098549:-1:exon
so has part: feature:1097723-1097773:-1:exon
so has part: feature:1095666-1095730:-1:exon
so has part: feature:1094970-1095051:-1:exon
so has part: feature:1093705-1093855:-1:exon
so has part: feature:1092726-1092923:-1:exon
so has part: feature:1090455-1090628:-1:exon
so has part: feature:1088500-1088663:-1:exon
so has part: feature:1087252-1087323:-1:exon
so has part: feature:1085521-1085594:-1:exon
so has part: feature:1082067-1082170:-1:exon
so has part: feature:1075116-1075297:-1:exon
so has part: feature:1072763-1073014:-1:exon
so has part: feature:1071087-1071261:-1:exon
so has part: feature:1069205-1069307:-1:exon
so has part: feature:1068925-1069070:-1:exon
so has part: feature:1068380-1068439:-1:exon
so has part: feature:1067189-1067316:-1:exon
so has part: feature:1065524-1065659:-1:exon
so has part: feature:1060041-1060106:-1:exon
so has part: feature:1059288-1059391:-1:exon
so has part: feature:1057296-1057461:-1:exon
so has part: feature:1053428-1053520:-1:exon

XP_041586804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1178843-1178881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115414-1115536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107252-1107341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106419-1106499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1103106-1103213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1101082-1101210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1098446-1098549:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1097723-1097773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1095666-1095730:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1094970-1095051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1093705-1093855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1092726-1092923:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1090455-1090628:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1088500-1088663:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1087252-1087323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1085521-1085594:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1082067-1082170:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1075116-1075297:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1072763-1073014:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1071087-1071261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1069205-1069307:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1068925-1069070:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1068380-1068439:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1067189-1067316:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1065524-1065659:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1060041-1060106:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1059288-1059391:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1057296-1057461:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1053428-1053520:-1:exon

ATP11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ATP11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IH isoform X2
translation: MDCSLARTLVRRYCAGEENWVDSRTIYVGHKEPPPGAEAYILQRHPDNRIVSSKYTFWNFIPKNLFEQFRRIANFYFLIIFLVQLIIDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQSRKLRVGDIVMVKEDETFPCDLIFLSSSRGDGTCHVTTASLDGESSHKTHYAVQDTKGFHTEEDIDGLHATIECEQPQPDLYKFVGRINVYNDRNDPVVRPLGSENLLLRGATLKNTEKIFGVAIYTGMETKMALNYQSKSQKRSAVEKSMNVFLIVYLCILISKALINTVLKYVWQSEPFRDEPWYNQKTESERQRNLFLRAFTDFLAFMVLFNYIIPVSMYVTVEMQKFLGSYFITWDEEMFDEDSGEGPLVNTSDLNEELGQVEYIFTDKTGTLTENNMEFKECCIEGHVYVPHAICNGQVLPGASGIDMIDSSPGTSAREREELFFRALCLCHTIQVKDDDDVDGPRKSPDSGKSCTYISSSPDEVALVEGIQRLGFTYLRLKDNYMEILNRENDMERFELLEILSFDSVRRRMSVIVKSATGEIYLFCKGADSSIFPRVIEGKVDQIRARVERNAVEGLRTLCVAYKRLNPEEYEGICMLLQAAKVALQDREKKLAEAYEQIEKDLVLLGATAVEDRLQEKAADTIEALQKAGIKVWVLTGDKMETAAATCYACKLFRRNTQLLELTTKKIEEQSLHDVLFELSKTVLRHSGSLTRDNFSGLSADMQDYGLIIDGAALSLIMKPREDGSCGNYRELFLEICRNCSAVLCCRMAPLQKAQIVKLIKLSKEHPITLAIGDGANDVSMILEAHVGIGVIGKEGRQAARNSDYAVPKFKHLKKMLLVHGHFYYIRISELVQYFFYKNVCFIFPQFLYQFFCGFSQQTLYDTAYLTLYNISFTSLPILLYSLMEQHVSIDTLRRDPSLYRDIAKNALLRWRVFIYWTFLGVFDALVFFFGAYFMFENTTVTSNGQIFGNWTFGTLVFTVMVFTVTLKLALDTHYWTWINHFVIWGSLLFYIVFSLLWGGIIWPFLNYQRMYYVFIQMLSSGPAWLVIILLITVSLLPDVLKKVLCRQLWPSATERVQQSTKLKASVAAAPSMDGPLLKDLLPRPRRH
SIO_010081: ATP11A
subclass of: SO_0000673
so part of: ATP11A
location: complement(join(1053428..1053520,1057296..1057461,1059288..1059391,1060041..1060106,1065524..1065659,1067189..1067316,1068380..1068439,1068925..1069070,1069205..1069307,1071087..1071261,1072763..1073014,1075116..1075297,1082067..1082170,1085521..1085594,1087252..1087323,1088500..1088663,1090455..1090628,1092726..1092923,1093705..1093855,1094970..1095051,1095666..1095730,1097723..1097773,1098446..1098549,1101082..1101210,1103106..1103213,1106419..1106499,1107252..1107341,1115414..1115536,1178843..1178881))
location: region:1053428-1178881:-1
so has part: feature:1178843-1178881:-1:exon
so has part: feature:1115414-1115536:-1:exon
so has part: feature:1107252-1107341:-1:exon
so has part: feature:1106419-1106499:-1:exon
so has part: feature:1103106-1103213:-1:exon
so has part: feature:1101082-1101210:-1:exon
so has part: feature:1098446-1098549:-1:exon
so has part: feature:1097723-1097773:-1:exon
so has part: feature:1095666-1095730:-1:exon
so has part: feature:1094970-1095051:-1:exon
so has part: feature:1093705-1093855:-1:exon
so has part: feature:1092726-1092923:-1:exon
so has part: feature:1090455-1090628:-1:exon
so has part: feature:1088500-1088663:-1:exon
so has part: feature:1087252-1087323:-1:exon
so has part: feature:1085521-1085594:-1:exon
so has part: feature:1082067-1082170:-1:exon
so has part: feature:1075116-1075297:-1:exon
so has part: feature:1072763-1073014:-1:exon
so has part: feature:1071087-1071261:-1:exon
so has part: feature:1069205-1069307:-1:exon
so has part: feature:1068925-1069070:-1:exon
so has part: feature:1068380-1068439:-1:exon
so has part: feature:1067189-1067316:-1:exon
so has part: feature:1065524-1065659:-1:exon
so has part: feature:1060041-1060106:-1:exon
so has part: feature:1059288-1059391:-1:exon
so has part: feature:1057296-1057461:-1:exon
so has part: feature:1053428-1053520:-1:exon

XP_041586805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1178843-1178881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115414-1115536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107252-1107341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106419-1106499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1103106-1103213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1101082-1101210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1098446-1098549:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1097723-1097773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1095666-1095730:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1094970-1095051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1093705-1093855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1092726-1092923:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1090455-1090628:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1088500-1088663:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1087252-1087323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1085521-1085594:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1082067-1082170:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1075116-1075297:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1072763-1073014:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1071087-1071261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1069205-1069307:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1068925-1069070:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1068380-1068439:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1067189-1067316:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1065524-1065659:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1060041-1060106:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1059288-1059391:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1057296-1057461:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1053428-1053520:-1:exon

ATP11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ATP11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IH isoform X4
translation: MDCSLARTLVRRYCAGEENWVDSRTIYVGHKEPPPGAEAYILQRHPDNRIVSSKYTFWNFIPKNLFEQFRRIANFYFLIIFLVQLIIDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQSRKLRVGDIVMVKEDETFPCDLIFLSSSRGDGTCHVTTASLDGESSHKTHYAVQDTKGFHTEEDIDGLHATIECEQPQPDLYKFVGRINVYNDRNDPVVRPLGSENLLLRGATLKNTEKIFGVAIYTGMETKMALNYQSKSQKRSAVEKSMNVFLIVYLCILISKALINTVLKYVWQSEPFRDEPWYNQKTESERQRNLFLRAFTDFLAFMVLFNYIIPVSMYVTVEMQKFLGSYFITWDEEMFDEDSGEGPLVNTSDLNEELGQVEYIFTDKTGTLTENNMEFKECCIEGHVYVPHAICNGQVLPGASGIDMIDSSPGTSAREREELFFRALCLCHTIQVKDDDDVDGPRKSPDSGKSCTYISSSPDEVALVEGIQRLGFTYLRLKDNYMEILNRENDMERFELLEILSFDSVRRRMSVIVKSATGEIYLFCKGADSSIFPRVIEGKVDQIRARVERNAVEGLRTLCVAYKRLNPEEYEGICMLLQAAKVALQDREKKLAEAYEQIEKDLVLLGATAVEDRLQEKAADTIEALQKAGIKVWVLTGDKMETAAATCYACKLFRRNTQLLELTTKKIEEQSLHDVLFELSKTVLRHSGSLTRDNFSGLSADMQDYGLIIDGAALSLIMKPREDGSCGNYRELFLEICRNCSAVLCCRMAPLQKAQIVKLIKLSKEHPITLAIGDGANDVSMILEAHVGIGVIGKEGRQAARNSDYAVPKFKHLKKMLLVHGHFYYIRISELVQYFFYKNVCFIFPQFLYQFFCGFSQQTLYDTAYLTLYNISFTSLPILLYSLMEQHVSIDTLRRDPSLYRDIAKNALLRWRVFIYWTFLGVFDALVFFFGAYFMFENTTVTSNGQIFGNWTFGTLVFTVMVFTVTLKLALDTHYWTWINHFVIWGSLLFYIVFSLLWGGIIWPFLNYQRMYYVFIQMLSSGPAWLVIILLITVSLLPDVLKKVLCRQLWPSATERVQTKNQCLSVEQSTIFMLSQTSSSLSF
SIO_010081: ATP11A
subclass of: SO_0000673
so part of: ATP11A
location: complement(join(1055604..1055681,1057296..1057461,1059288..1059391,1060041..1060106,1065524..1065659,1067189..1067316,1068380..1068439,1068925..1069070,1069205..1069307,1071087..1071261,1072763..1073014,1075116..1075297,1082067..1082170,1085521..1085594,1087252..1087323,1088500..1088663,1090455..1090628,1092726..1092923,1093705..1093855,1094970..1095051,1095666..1095730,1097723..1097773,1098446..1098549,1101082..1101210,1103106..1103213,1106419..1106499,1107252..1107341,1115414..1115536,1178843..1178881))
location: region:1055604-1178881:-1
so has part: feature:1178843-1178881:-1:exon
so has part: feature:1115414-1115536:-1:exon
so has part: feature:1107252-1107341:-1:exon
so has part: feature:1106419-1106499:-1:exon
so has part: feature:1103106-1103213:-1:exon
so has part: feature:1101082-1101210:-1:exon
so has part: feature:1098446-1098549:-1:exon
so has part: feature:1097723-1097773:-1:exon
so has part: feature:1095666-1095730:-1:exon
so has part: feature:1094970-1095051:-1:exon
so has part: feature:1093705-1093855:-1:exon
so has part: feature:1092726-1092923:-1:exon
so has part: feature:1090455-1090628:-1:exon
so has part: feature:1088500-1088663:-1:exon
so has part: feature:1087252-1087323:-1:exon
so has part: feature:1085521-1085594:-1:exon
so has part: feature:1082067-1082170:-1:exon
so has part: feature:1075116-1075297:-1:exon
so has part: feature:1072763-1073014:-1:exon
so has part: feature:1071087-1071261:-1:exon
so has part: feature:1069205-1069307:-1:exon
so has part: feature:1068925-1069070:-1:exon
so has part: feature:1068380-1068439:-1:exon
so has part: feature:1067189-1067316:-1:exon
so has part: feature:1065524-1065659:-1:exon
so has part: feature:1060041-1060106:-1:exon
so has part: feature:1059288-1059391:-1:exon
so has part: feature:1057296-1057461:-1:exon
so has part: feature:1055604-1055681:-1:exon

XP_041586808.1
type: Protein
SIO_000068: ncbiprotein

position:1055604:-1
position: 1055604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178843-1178881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115414-1115536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107252-1107341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106419-1106499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1103106-1103213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1101082-1101210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1098446-1098549:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1097723-1097773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1095666-1095730:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1094970-1095051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1093705-1093855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1092726-1092923:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1090455-1090628:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1088500-1088663:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1087252-1087323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1085521-1085594:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1082067-1082170:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1075116-1075297:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1072763-1073014:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1071087-1071261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1069205-1069307:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1068925-1069070:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1068380-1068439:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1067189-1067316:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1065524-1065659:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1060041-1060106:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1059288-1059391:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1057296-1057461:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1055604-1055681:-1:exon

ATP11A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 494514
gene: ATP11A
product: ATPase phospholipid transporting 11A, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005984033.1
SIO_010081: ATP11A
so part of: ATP11A
location: complement(join(1057328..1057461,1059073..1059391,1060041..1060106,1065524..1065659,1067189..1067316,1068380..1068439,1068925..1069070,1069205..1069307,1071087..1071261,1072763..1073014,1075116..1075297,1082067..1082170,1085521..1085594,1087252..1087323,1088500..1088663,1090455..1090628,1092726..1092923,1093705..1093855,1094970..1095051,1095666..1095730,1097723..1097773,1098446..1098549,1101082..1101210,1103106..1103213,1106419..1106499,1107252..1107341,1115414..1115536,1178843..1179231))
location: region:1057328-1179231:-1
so has part: feature:1178843-1179231:-1:exon
so has part: feature:1115414-1115536:-1:exon
so has part: feature:1107252-1107341:-1:exon
so has part: feature:1106419-1106499:-1:exon
so has part: feature:1103106-1103213:-1:exon
so has part: feature:1101082-1101210:-1:exon
so has part: feature:1098446-1098549:-1:exon
so has part: feature:1097723-1097773:-1:exon
so has part: feature:1095666-1095730:-1:exon
so has part: feature:1094970-1095051:-1:exon
so has part: feature:1093705-1093855:-1:exon
so has part: feature:1092726-1092923:-1:exon
so has part: feature:1090455-1090628:-1:exon
so has part: feature:1088500-1088663:-1:exon
so has part: feature:1087252-1087323:-1:exon
so has part: feature:1085521-1085594:-1:exon
so has part: feature:1082067-1082170:-1:exon
so has part: feature:1075116-1075297:-1:exon
so has part: feature:1072763-1073014:-1:exon
so has part: feature:1071087-1071261:-1:exon
so has part: feature:1069205-1069307:-1:exon
so has part: feature:1068925-1069070:-1:exon
so has part: feature:1068380-1068439:-1:exon
so has part: feature:1067189-1067316:-1:exon
so has part: feature:1065524-1065659:-1:exon
so has part: feature:1060041-1060106:-1:exon
so has part: feature:1059073-1059391:-1:exon
so has part: feature:1057328-1057461:-1:exon

position:1057328:-1
position: 1057328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178843-1179231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115414-1115536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107252-1107341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106419-1106499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1103106-1103213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1101082-1101210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1098446-1098549:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1097723-1097773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1095666-1095730:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1094970-1095051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1093705-1093855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1092726-1092923:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1090455-1090628:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1088500-1088663:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1087252-1087323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1085521-1085594:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1082067-1082170:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1075116-1075297:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1072763-1073014:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1071087-1071261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1069205-1069307:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1068925-1069070:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1068380-1068439:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1067189-1067316:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1065524-1065659:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1060041-1060106:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1059073-1059391:-1:exon

position:1059073:-1
position: 1059073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1057328-1057461:-1:exon

LOC121477174
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121477174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1178943..1182000
location: region:1178943-1182000:1
so has part: feature:1178943-1182000:1:exon
subclass of: SO_0000010

121477174
type: Gene
SIO_000068: ncbigene

position:1178943:1
position: 1178943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182000:1
position: 1182000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178943-1182000:1:exon

LOC121477174
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LOC121477174
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041731403.1
SIO_010081: LOC121477174
subclass of: SO_0000673
so part of: LOC121477174
location: join(1178943..1179036,1179650..1180329,1181215..1182000)
location: region:1178943-1182000:1
so has part: feature:1178943-1179036:1:exon
so has part: feature:1179650-1180329:1:exon
so has part: feature:1181215-1182000:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1178943-1179036:1:exon

position:1179036:1
position: 1179036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1179650-1180329:1:exon

position:1179650:1
position: 1179650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180329:1
position: 1180329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1181215-1182000:1:exon

position:1181215:1
position: 1181215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121477174
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LOC121477174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like
translation: MGPAPARSRPGSAARCRGRPRPLGAHARPGPARPRRGEAAGPWGGRRGGAGGAPCRFRCRGGAGPGGGGRGARPAEASARARGTSCLRPEGPRAGAGRGVAGALLRSGGAAPCLGAAGSAQRFPRGLQVSGAREPTPAPASPCPSRQHQGGPGWSRPAACDSSRLPAWRPLPAGPPQPPPARPCSPRALRAWAGGLLLALTPPPHSGDACSRGRSRALSNAGSLVLTQLLAPTCLPASPVTPPVRREQPRPCPGKDAKVCVWMRRPVPAAFLCL
SIO_010081: LOC121477174
subclass of: SO_0000673
so part of: LOC121477174
location: join(1178943..1179036,1179650..1180329,1181215..1181265)
location: region:1178943-1181265:1
so has part: feature:1178943-1179036:1:exon
so has part: feature:1179650-1180329:1:exon
so has part: feature:1181215-1181265:1:exon

XP_041587337.1
type: Protein
SIO_000068: ncbiprotein

position:1181265:1
position: 1181265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178943-1179036:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1179650-1180329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1181215-1181265:1:exon

TUBGCP3
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: TUBGCP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1241337..1329845
location: region:1241337-1329845:1
so has part: feature:1241337-1329845:1:exon
subclass of: SO_0000010

121476878
type: Gene
SIO_000068: ncbigene

position:1241337:1
position: 1241337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1329845:1
position: 1329845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1241337-1329845:1:exon

TUBGCP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: TUBGCP3
product: tubulin gamma complex associated protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041731034.1
SIO_010081: TUBGCP3
subclass of: SO_0000673
so part of: TUBGCP3
location: join(1241337..1241569,1251783..1251890,1255399..1255466,1259358..1259435,1260755..1260972,1262860..1263032,1265132..1265250,1265822..1265947,1267422..1267490,1267864..1268032,1269567..1269733,1283174..1283284,1283587..1283695,1286683..1286872,1287755..1287890,1288649..1288717,1292319..1292454,1300207..1300295,1300420..1300551,1310777..1310917,1314963..1315079,1322945..1329845)
location: region:1241337-1329845:1
so has part: feature:1241337-1241569:1:exon
so has part: feature:1251783-1251890:1:exon
so has part: feature:1255399-1255466:1:exon
so has part: feature:1259358-1259435:1:exon
so has part: feature:1260755-1260972:1:exon
so has part: feature:1262860-1263032:1:exon
so has part: feature:1265132-1265250:1:exon
so has part: feature:1265822-1265947:1:exon
so has part: feature:1267422-1267490:1:exon
so has part: feature:1267864-1268032:1:exon
so has part: feature:1269567-1269733:1:exon
so has part: feature:1283174-1283284:1:exon
so has part: feature:1283587-1283695:1:exon
so has part: feature:1286683-1286872:1:exon
so has part: feature:1287755-1287890:1:exon
so has part: feature:1288649-1288717:1:exon
so has part: feature:1292319-1292454:1:exon
so has part: feature:1300207-1300295:1:exon
so has part: feature:1300420-1300551:1:exon
so has part: feature:1310777-1310917:1:exon
so has part: feature:1314963-1315079:1:exon
so has part: feature:1322945-1329845:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1241337-1241569:1:exon

position:1241569:1
position: 1241569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1251783-1251890:1:exon

position:1251783:1
position: 1251783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251890:1
position: 1251890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1255399-1255466:1:exon

position:1255399:1
position: 1255399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1255466:1
position: 1255466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1259358-1259435:1:exon

position:1259358:1
position: 1259358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1259435:1
position: 1259435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1260755-1260972:1:exon

position:1260755:1
position: 1260755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260972:1
position: 1260972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1262860-1263032:1:exon

position:1262860:1
position: 1262860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263032:1
position: 1263032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1265132-1265250:1:exon

position:1265132:1
position: 1265132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1265250:1
position: 1265250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1265822-1265947:1:exon

position:1265822:1
position: 1265822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1265947:1
position: 1265947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1267422-1267490:1:exon

position:1267422:1
position: 1267422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267490:1
position: 1267490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1267864-1268032:1:exon

position:1267864:1
position: 1267864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268032:1
position: 1268032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1269567-1269733:1:exon

position:1269567:1
position: 1269567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269733:1
position: 1269733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1283174-1283284:1:exon

position:1283174:1
position: 1283174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283284:1
position: 1283284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1283587-1283695:1:exon

position:1283587:1
position: 1283587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283695:1
position: 1283695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1286683-1286872:1:exon

position:1286683:1
position: 1286683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1286872:1
position: 1286872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1287755-1287890:1:exon

position:1287755:1
position: 1287755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1287890:1
position: 1287890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1288649-1288717:1:exon

position:1288649:1
position: 1288649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288717:1
position: 1288717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1292319-1292454:1:exon

position:1292319:1
position: 1292319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292454:1
position: 1292454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1300207-1300295:1:exon

position:1300207:1
position: 1300207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300295:1
position: 1300295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1300420-1300551:1:exon

position:1300420:1
position: 1300420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300551:1
position: 1300551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1310777-1310917:1:exon

position:1310777:1
position: 1310777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1310917:1
position: 1310917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1314963-1315079:1:exon

position:1314963:1
position: 1314963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1315079:1
position: 1315079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1322945-1329845:1:exon

position:1322945:1
position: 1322945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TUBGCP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: TUBGCP3
product: tubulin gamma complex associated protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041731032.1
SIO_010081: TUBGCP3
subclass of: SO_0000673
so part of: TUBGCP3
location: join(1241337..1241569,1251783..1251890,1255399..1255466,1259358..1259435,1260755..1260972,1262860..1263032,1265132..1265250,1265822..1265947,1267422..1267490,1267864..1268032,1269567..1269733,1283174..1283284,1283587..1283695,1286683..1286872,1287755..1287890,1288649..1288717,1292319..1292454,1300207..1300295,1300420..1300551,1310777..1310917,1314963..1315079,1317211..1318335)
location: region:1241337-1318335:1
so has part: feature:1241337-1241569:1:exon
so has part: feature:1251783-1251890:1:exon
so has part: feature:1255399-1255466:1:exon
so has part: feature:1259358-1259435:1:exon
so has part: feature:1260755-1260972:1:exon
so has part: feature:1262860-1263032:1:exon
so has part: feature:1265132-1265250:1:exon
so has part: feature:1265822-1265947:1:exon
so has part: feature:1267422-1267490:1:exon
so has part: feature:1267864-1268032:1:exon
so has part: feature:1269567-1269733:1:exon
so has part: feature:1283174-1283284:1:exon
so has part: feature:1283587-1283695:1:exon
so has part: feature:1286683-1286872:1:exon
so has part: feature:1287755-1287890:1:exon
so has part: feature:1288649-1288717:1:exon
so has part: feature:1292319-1292454:1:exon
so has part: feature:1300207-1300295:1:exon
so has part: feature:1300420-1300551:1:exon
so has part: feature:1310777-1310917:1:exon
so has part: feature:1314963-1315079:1:exon
so has part: feature:1317211-1318335:1:exon

position:1318335:1
position: 1318335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1241337-1241569:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1251783-1251890:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1255399-1255466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259358-1259435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1260755-1260972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1262860-1263032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1265132-1265250:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1265822-1265947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1267422-1267490:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1267864-1268032:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1269567-1269733:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1283174-1283284:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1283587-1283695:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1286683-1286872:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1287755-1287890:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1288649-1288717:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1292319-1292454:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1300207-1300295:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1300420-1300551:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1310777-1310917:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1314963-1315079:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1317211-1318335:1:exon

position:1317211:1
position: 1317211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TUBGCP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: TUBGCP3
product: tubulin gamma complex associated protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041731033.1
SIO_010081: TUBGCP3
subclass of: SO_0000673
so part of: TUBGCP3
location: join(1241337..1241569,1251783..1251890,1255399..1255466,1259358..1259435,1260755..1260972,1262860..1263032,1265132..1265250,1265822..1265947,1267422..1267490,1267864..1267996,1269567..1269733,1283174..1283284,1283587..1283695,1286683..1286872,1287755..1287890,1288649..1288717,1292319..1292454,1300207..1300295,1300420..1300551,1310777..1310917,1314963..1315079,1317211..1318335)
location: region:1241337-1318335:1
so has part: feature:1241337-1241569:1:exon
so has part: feature:1251783-1251890:1:exon
so has part: feature:1255399-1255466:1:exon
so has part: feature:1259358-1259435:1:exon
so has part: feature:1260755-1260972:1:exon
so has part: feature:1262860-1263032:1:exon
so has part: feature:1265132-1265250:1:exon
so has part: feature:1265822-1265947:1:exon
so has part: feature:1267422-1267490:1:exon
so has part: feature:1267864-1267996:1:exon
so has part: feature:1269567-1269733:1:exon
so has part: feature:1283174-1283284:1:exon
so has part: feature:1283587-1283695:1:exon
so has part: feature:1286683-1286872:1:exon
so has part: feature:1287755-1287890:1:exon
so has part: feature:1288649-1288717:1:exon
so has part: feature:1292319-1292454:1:exon
so has part: feature:1300207-1300295:1:exon
so has part: feature:1300420-1300551:1:exon
so has part: feature:1310777-1310917:1:exon
so has part: feature:1314963-1315079:1:exon
so has part: feature:1317211-1318335:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1241337-1241569:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1251783-1251890:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1255399-1255466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259358-1259435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1260755-1260972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1262860-1263032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1265132-1265250:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1265822-1265947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1267422-1267490:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1267864-1267996:1:exon

position:1267996:1
position: 1267996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1269567-1269733:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1283174-1283284:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1283587-1283695:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1286683-1286872:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1287755-1287890:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1288649-1288717:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1292319-1292454:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1300207-1300295:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1300420-1300551:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1310777-1310917:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1314963-1315079:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1317211-1318335:1:exon

TUBGCP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: TUBGCP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-tubulin complex component 3 isoform X3
translation: MATPDQKSPNVLLQNLCCRILGRSEADVAQQFQYAVRVIGSNFAPTVERDEFLVAEKIKKELIRQRREADAALFSELHRKLHSQGVLKNKWSILYLLLSLSEDPRKQPNKVSSYAALFAQALPRDAHSTPYYYARPQTLPLNYQDRSTQSTQSAGSMGSSGVSSISVYTLNGPTPTPQSLLPGQPHHAPGVGDCLRQQLGSRLAWTLTTNQPSSQITTSKGIPNTVSRNVTRPRREGDAGGAGEVTEAALVRDILYVFQGIDGKNIKMSTTENCYKVEAKANLSKSLRDTAVRLAELGWLHNKIRKYTDQRSLDRSFGLVGQSFCAALHQELKEYYRLLSVLHSQLQLEDDQGVNLGLENSLTLRRLLVWTYDPKIRLKTLAALVDHCQGCSLSYGPVLFQGRKGGELASAVHAYTKTGDPYVRSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVASDPAVKTDRLWQDKYTLRKSMIPSFITMDQSRKVLLIGKSINFLHQVCHDQTPTTKMIAVTQSADSPQDAADVFTDLENAFRGKIDAAYFETSKYLLDVLNRKYSLLDHMQAVRRYLLLGQGDFIRHLMDLLKPELVRPATTLYQHNLTGILETAVRATNAQFDSPEILKRLDVRLLEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTDIRKGHMCNAKLLRNMPEFSGVLHHCHILASEMVHFIHQMQYYITFEVLECSWDELWNKVQQAQDLDHIIAAHEVFLDTIISRCLLDTDSRALLNQLRAVFDQIIELQNTQDAIYRAALEELQRRLQFEEKKKQHEIEGRWGVTAAEEEEENKRIQEFRESIPKMCSQLRILTHFYQGANCECGSSP
SIO_010081: TUBGCP3
subclass of: SO_0000673
so part of: TUBGCP3
location: join(1241494..1241569,1251783..1251890,1255399..1255466,1259358..1259435,1260755..1260972,1262860..1263032,1265132..1265250,1265822..1265947,1267422..1267490,1267864..1268032,1269567..1269733,1283174..1283284,1283587..1283695,1286683..1286872,1287755..1287890,1288649..1288717,1292319..1292454,1300207..1300295,1300420..1300551,1310777..1310917,1314963..1315079,1322945..1322977)
location: region:1241494-1322977:1
so has part: feature:1241494-1241569:1:exon
so has part: feature:1251783-1251890:1:exon
so has part: feature:1255399-1255466:1:exon
so has part: feature:1259358-1259435:1:exon
so has part: feature:1260755-1260972:1:exon
so has part: feature:1262860-1263032:1:exon
so has part: feature:1265132-1265250:1:exon
so has part: feature:1265822-1265947:1:exon
so has part: feature:1267422-1267490:1:exon
so has part: feature:1267864-1268032:1:exon
so has part: feature:1269567-1269733:1:exon
so has part: feature:1283174-1283284:1:exon
so has part: feature:1283587-1283695:1:exon
so has part: feature:1286683-1286872:1:exon
so has part: feature:1287755-1287890:1:exon
so has part: feature:1288649-1288717:1:exon
so has part: feature:1292319-1292454:1:exon
so has part: feature:1300207-1300295:1:exon
so has part: feature:1300420-1300551:1:exon
so has part: feature:1310777-1310917:1:exon
so has part: feature:1314963-1315079:1:exon
so has part: feature:1322945-1322977:1:exon

XP_041586968.1
type: Protein
SIO_000068: ncbiprotein

position:1241494:1
position: 1241494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1322977:1
position: 1322977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1241494-1241569:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1251783-1251890:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1255399-1255466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259358-1259435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1260755-1260972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1262860-1263032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1265132-1265250:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1265822-1265947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1267422-1267490:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1267864-1268032:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1269567-1269733:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1283174-1283284:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1283587-1283695:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1286683-1286872:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1287755-1287890:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1288649-1288717:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1292319-1292454:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1300207-1300295:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1300420-1300551:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1310777-1310917:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1314963-1315079:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1322945-1322977:1:exon

TUBGCP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: TUBGCP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-tubulin complex component 3 isoform X1
translation: MATPDQKSPNVLLQNLCCRILGRSEADVAQQFQYAVRVIGSNFAPTVERDEFLVAEKIKKELIRQRREADAALFSELHRKLHSQGVLKNKWSILYLLLSLSEDPRKQPNKVSSYAALFAQALPRDAHSTPYYYARPQTLPLNYQDRSTQSTQSAGSMGSSGVSSISVYTLNGPTPTPQSLLPGQPHHAPGVGDCLRQQLGSRLAWTLTTNQPSSQITTSKGIPNTVSRNVTRPRREGDAGGAGEVTEAALVRDILYVFQGIDGKNIKMSTTENCYKVEAKANLSKSLRDTAVRLAELGWLHNKIRKYTDQRSLDRSFGLVGQSFCAALHQELKEYYRLLSVLHSQLQLEDDQGVNLGLENSLTLRRLLVWTYDPKIRLKTLAALVDHCQGCSLSYGPVLFQGRKGGELASAVHAYTKTGDPYVRSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVASDPAVKTDRLWQDKYTLRKSMIPSFITMDQSRKVLLIGKSINFLHQVCHDQTPTTKMIAVTQSADSPQDAADVFTDLENAFRGKIDAAYFETSKYLLDVLNRKYSLLDHMQAVRRYLLLGQGDFIRHLMDLLKPELVRPATTLYQHNLTGILETAVRATNAQFDSPEILKRLDVRLLEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTDIRKGHMCNAKLLRNMPEFSGVLHHCHILASEMVHFIHQMQYYITFEVLECSWDELWNKVQQAQDLDHIIAAHEVFLDTIISRCLLDTDSRALLNQLRAVFDQIIELQNTQDAIYRAALEELQRRLQFEEKKKQHEIEGRWGVTAAEEEEENKRIQEFRESIPKMCSQLRILTHFYQGIVQQFLVLLTTSSDESLRFLSFRLDFNEHYEAREPRLRVSLGSRGRRGSHT
SIO_010081: TUBGCP3
subclass of: SO_0000673
so part of: TUBGCP3
location: join(1241494..1241569,1251783..1251890,1255399..1255466,1259358..1259435,1260755..1260972,1262860..1263032,1265132..1265250,1265822..1265947,1267422..1267490,1267864..1268032,1269567..1269733,1283174..1283284,1283587..1283695,1286683..1286872,1287755..1287890,1288649..1288717,1292319..1292454,1300207..1300295,1300420..1300551,1310777..1310917,1314963..1315079,1317211..1317369)
location: region:1241494-1317369:1
so has part: feature:1241494-1241569:1:exon
so has part: feature:1251783-1251890:1:exon
so has part: feature:1255399-1255466:1:exon
so has part: feature:1259358-1259435:1:exon
so has part: feature:1260755-1260972:1:exon
so has part: feature:1262860-1263032:1:exon
so has part: feature:1265132-1265250:1:exon
so has part: feature:1265822-1265947:1:exon
so has part: feature:1267422-1267490:1:exon
so has part: feature:1267864-1268032:1:exon
so has part: feature:1269567-1269733:1:exon
so has part: feature:1283174-1283284:1:exon
so has part: feature:1283587-1283695:1:exon
so has part: feature:1286683-1286872:1:exon
so has part: feature:1287755-1287890:1:exon
so has part: feature:1288649-1288717:1:exon
so has part: feature:1292319-1292454:1:exon
so has part: feature:1300207-1300295:1:exon
so has part: feature:1300420-1300551:1:exon
so has part: feature:1310777-1310917:1:exon
so has part: feature:1314963-1315079:1:exon
so has part: feature:1317211-1317369:1:exon

XP_041586966.1
type: Protein
SIO_000068: ncbiprotein

position:1317369:1
position: 1317369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1241494-1241569:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1251783-1251890:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1255399-1255466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259358-1259435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1260755-1260972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1262860-1263032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1265132-1265250:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1265822-1265947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1267422-1267490:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1267864-1268032:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1269567-1269733:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1283174-1283284:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1283587-1283695:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1286683-1286872:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1287755-1287890:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1288649-1288717:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1292319-1292454:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1300207-1300295:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1300420-1300551:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1310777-1310917:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1314963-1315079:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1317211-1317369:1:exon

TUBGCP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: TUBGCP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-tubulin complex component 3 isoform X2
translation: MATPDQKSPNVLLQNLCCRILGRSEADVAQQFQYAVRVIGSNFAPTVERDEFLVAEKIKKELIRQRREADAALFSELHRKLHSQGVLKNKWSILYLLLSLSEDPRKQPNKVSSYAALFAQALPRDAHSTPYYYARPQTLPLNYQDRSTQSTQSAGSMGSSGVSSISVYTLNGPTPTPQSLLPGQPHHAPGVGDCLRQQLGSRLAWTLTTNQPSSQITTSKGIPNTVSRNVTRPRREGDAGGAGEVTEAALVRDILYVFQGIDGKNIKMSTTENCYKVEAKANLSKSLRDTAVRLAELGWLHNKIRKYTDQRSLDRSFGLVGQSFCAALHQELKEYYRLLSVLHSQLQLEDDQGVNLGLENSLTLRRLLVWTYDPKIRLKTLAALVDHCQGRKGGELASAVHAYTKTGDPYVRSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVASDPAVKTDRLWQDKYTLRKSMIPSFITMDQSRKVLLIGKSINFLHQVCHDQTPTTKMIAVTQSADSPQDAADVFTDLENAFRGKIDAAYFETSKYLLDVLNRKYSLLDHMQAVRRYLLLGQGDFIRHLMDLLKPELVRPATTLYQHNLTGILETAVRATNAQFDSPEILKRLDVRLLEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTDIRKGHMCNAKLLRNMPEFSGVLHHCHILASEMVHFIHQMQYYITFEVLECSWDELWNKVQQAQDLDHIIAAHEVFLDTIISRCLLDTDSRALLNQLRAVFDQIIELQNTQDAIYRAALEELQRRLQFEEKKKQHEIEGRWGVTAAEEEEENKRIQEFRESIPKMCSQLRILTHFYQGIVQQFLVLLTTSSDESLRFLSFRLDFNEHYEAREPRLRVSLGSRGRRGSHT
SIO_010081: TUBGCP3
subclass of: SO_0000673
so part of: TUBGCP3
location: join(1241494..1241569,1251783..1251890,1255399..1255466,1259358..1259435,1260755..1260972,1262860..1263032,1265132..1265250,1265822..1265947,1267422..1267490,1267864..1267996,1269567..1269733,1283174..1283284,1283587..1283695,1286683..1286872,1287755..1287890,1288649..1288717,1292319..1292454,1300207..1300295,1300420..1300551,1310777..1310917,1314963..1315079,1317211..1317369)
location: region:1241494-1317369:1
so has part: feature:1241494-1241569:1:exon
so has part: feature:1251783-1251890:1:exon
so has part: feature:1255399-1255466:1:exon
so has part: feature:1259358-1259435:1:exon
so has part: feature:1260755-1260972:1:exon
so has part: feature:1262860-1263032:1:exon
so has part: feature:1265132-1265250:1:exon
so has part: feature:1265822-1265947:1:exon
so has part: feature:1267422-1267490:1:exon
so has part: feature:1267864-1267996:1:exon
so has part: feature:1269567-1269733:1:exon
so has part: feature:1283174-1283284:1:exon
so has part: feature:1283587-1283695:1:exon
so has part: feature:1286683-1286872:1:exon
so has part: feature:1287755-1287890:1:exon
so has part: feature:1288649-1288717:1:exon
so has part: feature:1292319-1292454:1:exon
so has part: feature:1300207-1300295:1:exon
so has part: feature:1300420-1300551:1:exon
so has part: feature:1310777-1310917:1:exon
so has part: feature:1314963-1315079:1:exon
so has part: feature:1317211-1317369:1:exon

XP_041586967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1241494-1241569:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1251783-1251890:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1255399-1255466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259358-1259435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1260755-1260972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1262860-1263032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1265132-1265250:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1265822-1265947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1267422-1267490:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1267864-1267996:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1269567-1269733:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1283174-1283284:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1283587-1283695:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1286683-1286872:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1287755-1287890:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1288649-1288717:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1292319-1292454:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1300207-1300295:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1300420-1300551:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1310777-1310917:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1314963-1315079:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1317211-1317369:1:exon

TUBGCP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: TUBGCP3
product: tubulin gamma complex associated protein 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041731035.1
SIO_010081: TUBGCP3
subclass of: SO_0000673
so part of: TUBGCP3
location: join(1259388..1259435,1260829..1260972,1262860..1263032,1265132..1265250,1265822..1265947,1267422..1267490,1267864..1268032,1269567..1269733,1283174..1283284,1283587..1283695,1286683..1286872,1287755..1287890,1288649..1288717,1292319..1292454,1300207..1300295,1300420..1300551,1310777..1310917,1314963..1315079,1317211..1318335)
location: region:1259388-1318335:1
so has part: feature:1259388-1259435:1:exon
so has part: feature:1260829-1260972:1:exon
so has part: feature:1262860-1263032:1:exon
so has part: feature:1265132-1265250:1:exon
so has part: feature:1265822-1265947:1:exon
so has part: feature:1267422-1267490:1:exon
so has part: feature:1267864-1268032:1:exon
so has part: feature:1269567-1269733:1:exon
so has part: feature:1283174-1283284:1:exon
so has part: feature:1283587-1283695:1:exon
so has part: feature:1286683-1286872:1:exon
so has part: feature:1287755-1287890:1:exon
so has part: feature:1288649-1288717:1:exon
so has part: feature:1292319-1292454:1:exon
so has part: feature:1300207-1300295:1:exon
so has part: feature:1300420-1300551:1:exon
so has part: feature:1310777-1310917:1:exon
so has part: feature:1314963-1315079:1:exon
so has part: feature:1317211-1318335:1:exon

position:1259388:1
position: 1259388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259388-1259435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1260829-1260972:1:exon

position:1260829:1
position: 1260829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1262860-1263032:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1265132-1265250:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1265822-1265947:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1267422-1267490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1267864-1268032:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1269567-1269733:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1283174-1283284:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1283587-1283695:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1286683-1286872:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1287755-1287890:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1288649-1288717:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1292319-1292454:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1300207-1300295:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1300420-1300551:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1310777-1310917:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1314963-1315079:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1317211-1318335:1:exon

TUBGCP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: TUBGCP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-tubulin complex component 3 isoform X4
translation: MGSSGVSSISVYTLNGPTPTPQSLLPGQPHHAPGVGDCLRQQLGSRLAWTLTTNQPSSQITTSKGIPNTVSRNVTRPRREGDAGGAGEVTEAALVRDILYVFQGIDGKNIKMSTTENCYKVEAKANLSKSLRDTAVRLAELGWLHNKIRKYTDQRSLDRSFGLVGQSFCAALHQELKEYYRLLSVLHSQLQLEDDQGVNLGLENSLTLRRLLVWTYDPKIRLKTLAALVDHCQGCSLSYGPVLFQGRKGGELASAVHAYTKTGDPYVRSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVASDPAVKTDRLWQDKYTLRKSMIPSFITMDQSRKVLLIGKSINFLHQVCHDQTPTTKMIAVTQSADSPQDAADVFTDLENAFRGKIDAAYFETSKYLLDVLNRKYSLLDHMQAVRRYLLLGQGDFIRHLMDLLKPELVRPATTLYQHNLTGILETAVRATNAQFDSPEILKRLDVRLLEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTDIRKGHMCNAKLLRNMPEFSGVLHHCHILASEMVHFIHQMQYYITFEVLECSWDELWNKVQQAQDLDHIIAAHEVFLDTIISRCLLDTDSRALLNQLRAVFDQIIELQNTQDAIYRAALEELQRRLQFEEKKKQHEIEGRWGVTAAEEEEENKRIQEFRESIPKMCSQLRILTHFYQGIVQQFLVLLTTSSDESLRFLSFRLDFNEHYEAREPRLRVSLGSRGRRGSHT
SIO_010081: TUBGCP3
subclass of: SO_0000673
so part of: TUBGCP3
location: join(1260893..1260972,1262860..1263032,1265132..1265250,1265822..1265947,1267422..1267490,1267864..1268032,1269567..1269733,1283174..1283284,1283587..1283695,1286683..1286872,1287755..1287890,1288649..1288717,1292319..1292454,1300207..1300295,1300420..1300551,1310777..1310917,1314963..1315079,1317211..1317369)
location: region:1260893-1317369:1
so has part: feature:1260893-1260972:1:exon
so has part: feature:1262860-1263032:1:exon
so has part: feature:1265132-1265250:1:exon
so has part: feature:1265822-1265947:1:exon
so has part: feature:1267422-1267490:1:exon
so has part: feature:1267864-1268032:1:exon
so has part: feature:1269567-1269733:1:exon
so has part: feature:1283174-1283284:1:exon
so has part: feature:1283587-1283695:1:exon
so has part: feature:1286683-1286872:1:exon
so has part: feature:1287755-1287890:1:exon
so has part: feature:1288649-1288717:1:exon
so has part: feature:1292319-1292454:1:exon
so has part: feature:1300207-1300295:1:exon
so has part: feature:1300420-1300551:1:exon
so has part: feature:1310777-1310917:1:exon
so has part: feature:1314963-1315079:1:exon
so has part: feature:1317211-1317369:1:exon

XP_041586969.1
type: Protein
SIO_000068: ncbiprotein

position:1260893:1
position: 1260893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1260893-1260972:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1262860-1263032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1265132-1265250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1265822-1265947:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1267422-1267490:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1267864-1268032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1269567-1269733:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1283174-1283284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1283587-1283695:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1286683-1286872:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1287755-1287890:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1288649-1288717:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1292319-1292454:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1300207-1300295:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1300420-1300551:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1310777-1310917:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1314963-1315079:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1317211-1317369:1:exon

LOC121477094
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121477094
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1343013..1343543
location: region:1343013-1343543:1
so has part: feature:1343013-1343543:1:exon
subclass of: SO_0000010

121477094
type: Gene
SIO_000068: ncbigene

position:1343013:1
position: 1343013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343543:1
position: 1343543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1343013-1343543:1:exon

LOC121477094
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LOC121477094
product: 60S ribosomal protein L34-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041731312.1
SIO_010081: LOC121477094
subclass of: SO_0000673
so part of: LOC121477094
location: 1343013..1343543
location: region:1343013-1343543:1
so has part: feature:1343013-1343543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1343013-1343543:1:exon

LOC121477094
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LOC121477094
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L34-like
translation: MVQRLTYCRRLSYNTASNKTRLSRTPGNRIVYLYIKKVGKAPKSACGVCPGRLRGVHAVRPKVLMRLSKTKKHISRAYGGSMCAKCVRDRIKCAFLIKEQKIVVKVLEGTSTESES
SIO_010081: LOC121477094
subclass of: SO_0000673
so part of: LOC121477094
location: 1343132..1343482
location: region:1343132-1343482:1
so has part: feature:1343132-1343482:1:exon

XP_041587246.1
type: Protein
SIO_000068: ncbiprotein

position:1343132:1
position: 1343132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343482:1
position: 1343482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1343132-1343482:1:exon

LOC121477019
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121477019
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1359230..1359719)
location: region:1359230-1359719:-1
so has part: feature:1359230-1359719:-1:exon
subclass of: SO_0000010

121477019
type: Gene
SIO_000068: ncbigene

position:1359230:-1
position: 1359230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1359719:-1
position: 1359719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1359230-1359719:-1:exon

LOC121477019
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: LOC121477019
product: 40S ribosomal protein S25-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041731200.1
SIO_010081: LOC121477019
subclass of: SO_0000673
so part of: LOC121477019
location: complement(1359230..1359719)
location: region:1359230-1359719:-1
so has part: feature:1359230-1359719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1359230-1359719:-1:exon

LOC121477019
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: LOC121477019
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S25-like
translation: MPPKDDKKKKDARKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLSDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPAAGEDA
SIO_010081: LOC121477019
subclass of: SO_0000673
so part of: LOC121477019
location: complement(1359289..1359666)
location: region:1359289-1359666:-1
so has part: feature:1359289-1359666:-1:exon

XP_041587134.1
type: Protein
SIO_000068: ncbiprotein

position:1359289:-1
position: 1359289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1359666:-1
position: 1359666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1359289-1359666:-1:exon

SOX1
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: SOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1578899..1580089)
location: region:1578899-1580089:-1
so has part: feature:1578899-1580089:-1:exon
subclass of: SO_0000010

121477026
type: Gene
SIO_000068: ncbigene

position:1578899:-1
position: 1578899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1580089:-1
position: 1580089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1578899-1580089:-1:exon

SOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: SOX1
product: SRY-box transcription factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 118 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041731208.1
SIO_010081: SOX1
subclass of: SO_0000673
so part of: SOX1
location: complement(1578899..1580089)
location: region:1578899-1580089:-1
so has part: feature:1578899-1580089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1578899-1580089:-1:exon

SOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: SOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-1
translation: MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGGGGGVAKASQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGVGAAAVGQRLESPGGAAGGGYAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHPHNPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNSAVAAAAAAAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPGGETGDPAAAAAAAAQSRLHSLPQHYQGAGAGVNGTVPLTHI
SIO_010081: SOX1
subclass of: SO_0000673
so part of: SOX1
location: complement(1578899..1580089)
location: region:1578899-1580089:-1
so has part: feature:1578899-1580089:-1:exon

XP_041587142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1578899-1580089:-1:exon

LOC121477198
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121477198
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1773637..1773743
location: region:1773637-1773743:1
so has part: feature:1773637-1773743:1:exon
subclass of: SO_0000623

121477198
type: Gene
SIO_000068: ncbigene

position:1773637:1
position: 1773637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1773743:1
position: 1773743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1773637-1773743:1:exon

LOC121477198
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 494514
nc RNA class: snRNA
gene: LOC121477198
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005984129.1
SIO_010081: LOC121477198
subclass of: SO_0000673
so part of: LOC121477198
location: 1773637..1773743
location: region:1773637-1773743:1
so has part: feature:1773637-1773743:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1773637-1773743:1:exon

TEX29
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: TEX29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2152392..2172091)
location: region:2152392-2172091:-1
so has part: feature:2152392-2172091:-1:exon
subclass of: SO_0000010

121476777
type: Gene
SIO_000068: ncbigene

position:2152392:-1
position: 2152392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2172091:-1
position: 2172091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2152392-2172091:-1:exon

TEX29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: TEX29
product: testis expressed 29
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041730833.1
SIO_010081: TEX29
subclass of: SO_0000673
so part of: TEX29
location: complement(join(2152392..2153605,2154364..2154527,2155141..2155210,2165698..2165808,2169058..2172091))
location: region:2152392-2172091:-1
so has part: feature:2169058-2172091:-1:exon
so has part: feature:2165698-2165808:-1:exon
so has part: feature:2155141-2155210:-1:exon
so has part: feature:2154364-2154527:-1:exon
so has part: feature:2152392-2153605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2169058-2172091:-1:exon

position:2169058:-1
position: 2169058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2165698-2165808:-1:exon

position:2165698:-1
position: 2165698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2165808:-1
position: 2165808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2155141-2155210:-1:exon

position:2155141:-1
position: 2155141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2155210:-1
position: 2155210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2154364-2154527:-1:exon

position:2154364:-1
position: 2154364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2154527:-1
position: 2154527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2152392-2153605:-1:exon

position:2153605:-1
position: 2153605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TEX29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: TEX29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-expressed protein 29
translation: MAASPRGPTCANLFSLPGFLDPLVCPSTATMRYAPEFKKSPSHLLKKFAVCDIPLYDICDYNVTRDRCKELGCCFYKGVCYEKAVPIYVQVFSALIVIIAGAFIITIIYRVFQENKREKEVPAGVPLSSKPSERGRAALSSEKLESKTEGLGPLSKTTGSRAEDAIVTIMNEEEESED
SIO_010081: TEX29
subclass of: SO_0000673
so part of: TEX29
location: complement(join(2153562..2153605,2154364..2154527,2155141..2155210,2165698..2165808,2169058..2169205))
location: region:2153562-2169205:-1
so has part: feature:2169058-2169205:-1:exon
so has part: feature:2165698-2165808:-1:exon
so has part: feature:2155141-2155210:-1:exon
so has part: feature:2154364-2154527:-1:exon
so has part: feature:2153562-2153605:-1:exon

XP_041586767.1
type: Protein
SIO_000068: ncbiprotein

position:2153562:-1
position: 2153562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2169205:-1
position: 2169205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2169058-2169205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2165698-2165808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2155141-2155210:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2154364-2154527:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2153562-2153605:-1:exon

ARHGEF7
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2173659..2297282)
location: region:2173659-2297282:-1
so has part: feature:2173659-2297282:-1:exon
subclass of: SO_0000010

121477147
type: Gene
SIO_000068: ncbigene

position:2173659:-1
position: 2173659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2297282:-1
position: 2297282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2173659-2297282:-1:exon

ARHGEF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ARHGEF7
product: Rho guanine nucleotide exchange factor 7, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041731375.1
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(2173659..2176256,2177148..2177202,2177347..2177446,2185266..2185442,2188231..2188320,2192632..2192725,2195014..2195238,2197888..2198027,2198222..2198300,2200659..2200745,2202617..2202763,2203388..2203447,2204363..2204501,2210047..2210169,2212569..2212664,2212884..2212978,2224222..2224310,2232853..2233054,2238516..2238646,2243136..2243220,2268612..2268698,2296808..2297277))
location: region:2173659-2297277:-1
so has part: feature:2296808-2297277:-1:exon
so has part: feature:2268612-2268698:-1:exon
so has part: feature:2243136-2243220:-1:exon
so has part: feature:2238516-2238646:-1:exon
so has part: feature:2232853-2233054:-1:exon
so has part: feature:2224222-2224310:-1:exon
so has part: feature:2212884-2212978:-1:exon
so has part: feature:2212569-2212664:-1:exon
so has part: feature:2210047-2210169:-1:exon
so has part: feature:2204363-2204501:-1:exon
so has part: feature:2203388-2203447:-1:exon
so has part: feature:2202617-2202763:-1:exon
so has part: feature:2200659-2200745:-1:exon
so has part: feature:2198222-2198300:-1:exon
so has part: feature:2197888-2198027:-1:exon
so has part: feature:2195014-2195238:-1:exon
so has part: feature:2192632-2192725:-1:exon
so has part: feature:2188231-2188320:-1:exon
so has part: feature:2185266-2185442:-1:exon
so has part: feature:2177347-2177446:-1:exon
so has part: feature:2177148-2177202:-1:exon
so has part: feature:2173659-2176256:-1:exon

position:2297277:-1
position: 2297277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2296808-2297277:-1:exon

position:2296808:-1
position: 2296808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2268612-2268698:-1:exon

position:2268612:-1
position: 2268612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2268698:-1
position: 2268698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2243136-2243220:-1:exon

position:2243136:-1
position: 2243136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2243220:-1
position: 2243220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2238516-2238646:-1:exon

position:2238516:-1
position: 2238516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2238646:-1
position: 2238646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2232853-2233054:-1:exon

position:2232853:-1
position: 2232853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2233054:-1
position: 2233054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2224222-2224310:-1:exon

position:2224222:-1
position: 2224222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2224310:-1
position: 2224310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2212884-2212978:-1:exon

position:2212884:-1
position: 2212884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2212978:-1
position: 2212978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2212569-2212664:-1:exon

position:2212569:-1
position: 2212569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2212664:-1
position: 2212664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2210047-2210169:-1:exon

position:2210047:-1
position: 2210047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2210169:-1
position: 2210169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2204363-2204501:-1:exon

position:2204363:-1
position: 2204363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2204501:-1
position: 2204501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2203388-2203447:-1:exon

position:2203388:-1
position: 2203388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2203447:-1
position: 2203447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2202617-2202763:-1:exon

position:2202617:-1
position: 2202617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2202763:-1
position: 2202763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2200659-2200745:-1:exon

position:2200659:-1
position: 2200659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2200745:-1
position: 2200745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2198222-2198300:-1:exon

position:2198222:-1
position: 2198222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2198300:-1
position: 2198300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2197888-2198027:-1:exon

position:2197888:-1
position: 2197888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2198027:-1
position: 2198027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2195014-2195238:-1:exon

position:2195014:-1
position: 2195014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2195238:-1
position: 2195238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2192632-2192725:-1:exon

position:2192632:-1
position: 2192632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2192725:-1
position: 2192725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2188231-2188320:-1:exon

position:2188231:-1
position: 2188231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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urn:…
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position:2176256:-1
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reference: sequence
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ARHGEF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ARHGEF7
product: Rho guanine nucleotide exchange factor 7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041731372.1
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(2173659..2176256,2177148..2177202,2177347..2177446,2188231..2188320,2192632..2192725,2195014..2195238,2197888..2198027,2198222..2198300,2200659..2200745,2202617..2202763,2203388..2203447,2204363..2204501,2210047..2210169,2212569..2212664,2212884..2212978,2224222..2224310,2232853..2233054,2238516..2238646,2243136..2243220,2296808..2297269))
location: region:2173659-2297269:-1
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ARHGEF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ARHGEF7
product: Rho guanine nucleotide exchange factor 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041731368.1
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(2173659..2176256,2177148..2177202,2177347..2177446,2188231..2188320,2192632..2192725,2195014..2195238,2197888..2198027,2198222..2198300,2200659..2200745,2202617..2202763,2203388..2203447,2204363..2204501,2210047..2210169,2212569..2212664,2212884..2212978,2224222..2224310,2232853..2233054,2238516..2238646,2243136..2243220,2268612..2268698,2296808..2297267))
location: region:2173659-2297267:-1
so has part: feature:2296808-2297267:-1:exon
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position:2297267:-1
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urn:…
SIO_000300: 21
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ARHGEF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ARHGEF7
product: Rho guanine nucleotide exchange factor 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041731371.1
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(2173659..2176256,2177148..2177202,2177347..2177446,2188231..2188320,2192632..2192725,2195014..2195238,2197888..2198027,2198222..2198300,2200659..2200745,2202617..2202763,2203388..2203447,2204363..2204501,2210047..2210169,2212569..2212664,2212884..2212978,2224222..2224310,2232853..2233054,2238516..2238646,2243136..2243220,2258763..2259383))
location: region:2173659-2259383:-1
so has part: feature:2258763-2259383:-1:exon
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urn:…
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ARHGEF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ARHGEF7
product: Rho guanine nucleotide exchange factor 7, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041731374.1
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(2173659..2176256,2177148..2177202,2177347..2177446,2188231..2188320,2192632..2192725,2195014..2195238,2197888..2198027,2198222..2198300,2200659..2200745,2202617..2202763,2203388..2203447,2204363..2204501,2210047..2210169,2212569..2212664,2212884..2212978,2224222..2224310,2232853..2233054,2238516..2238646,2243136..2243220,2245374..2245427))
location: region:2173659-2245427:-1
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position:2245427:-1
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urn:…
SIO_000300: 1
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urn:…
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ARHGEF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 7 isoform X4
translation: MNSAEQTVTWLIALGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKTFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGAQPSHSRTSKLFQGQYRSLDMTDNSNSQLVVRAKFNFQQTNEDELSFTKGDVIHVTRVEEGGWWEGTHNGKTGWFPSNYVREMKPSEKPVSPKSGALKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANTSYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMKTLYLAYCANHPSAVNVLTEHSEQLGEFMEARGASSPGILVLTTGLSRPFMRLDKYPTLLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDITTLGSVVYMSQVMVQCAGSEEKNERYLLLFPNILLMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLHEWVDHLQKQTKVTSVGNPTIKPHSVPSHTLPSHPIAPSSKHADSKPVPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSRKESAPQVLLPEEEKMIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVRKVLKNMNDPAWDETNL
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(2176134..2176256,2177148..2177202,2177347..2177446,2188231..2188320,2192632..2192725,2195014..2195238,2197888..2198027,2198222..2198300,2200659..2200745,2202617..2202763,2203388..2203447,2204363..2204501,2210047..2210169,2212569..2212664,2212884..2212978,2224222..2224310,2232853..2233054,2238516..2238646,2243136..2243220,2296808..2296972))
location: region:2176134-2296972:-1
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XP_041587306.1
type: Protein
SIO_000068: ncbiprotein

position:2176134:-1
position: 2176134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2296972:-1
position: 2296972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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SIO_000300: 2
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SIO_000300: 3
SIO_000628: feature:2238516-2238646:-1:exon

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SIO_000300: 4
SIO_000628: feature:2232853-2233054:-1:exon

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SIO_000300: 5
SIO_000628: feature:2224222-2224310:-1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 11
SIO_000628: feature:2202617-2202763:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2200659-2200745:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2198222-2198300:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2197888-2198027:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2195014-2195238:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2192632-2192725:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2188231-2188320:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2177347-2177446:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2177148-2177202:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2176134-2176256:-1:exon

ARHGEF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 7 isoform X1
translation: MNSAEQTVTWLIALGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSESECLSNIREFLRGCGASLRLETFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGAQPSHSRTSKLFQGQYRSLDMTDNSNSQLVVRAKFNFQQTNEDELSFTKGDVIHVTRVEEGGWWEGTHNGKTGWFPSNYVREMKPSEKPVSPKSGALKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANTSYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMKTLYLAYCANHPSAVNVLTEHSEQLGEFMEARGASSPGILVLTTGLSRPFMRLDKYPTLLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDITTLGSVVYMSQVMVQCAGSEEKNERYLLLFPNILLMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLHEWVDHLQKQTKVTSVGNPTIKPHSVPSHTLPSHPIAPSSKHADSKPVPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSRKESAPQVLLPEEEKMIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVRKVLKNMNDPAWDETNL
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(2176134..2176256,2177148..2177202,2177347..2177446,2188231..2188320,2192632..2192725,2195014..2195238,2197888..2198027,2198222..2198300,2200659..2200745,2202617..2202763,2203388..2203447,2204363..2204501,2210047..2210169,2212569..2212664,2212884..2212978,2224222..2224310,2232853..2233054,2238516..2238646,2243136..2243220,2268612..2268698,2296808..2296972))
location: region:2176134-2296972:-1
so has part: feature:2296808-2296972:-1:exon
so has part: feature:2268612-2268698:-1:exon
so has part: feature:2243136-2243220:-1:exon
so has part: feature:2238516-2238646:-1:exon
so has part: feature:2232853-2233054:-1:exon
so has part: feature:2224222-2224310:-1:exon
so has part: feature:2212884-2212978:-1:exon
so has part: feature:2212569-2212664:-1:exon
so has part: feature:2210047-2210169:-1:exon
so has part: feature:2204363-2204501:-1:exon
so has part: feature:2203388-2203447:-1:exon
so has part: feature:2202617-2202763:-1:exon
so has part: feature:2200659-2200745:-1:exon
so has part: feature:2198222-2198300:-1:exon
so has part: feature:2197888-2198027:-1:exon
so has part: feature:2195014-2195238:-1:exon
so has part: feature:2192632-2192725:-1:exon
so has part: feature:2188231-2188320:-1:exon
so has part: feature:2177347-2177446:-1:exon
so has part: feature:2177148-2177202:-1:exon
so has part: feature:2176134-2176256:-1:exon

XP_041587302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2296808-2296972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2268612-2268698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2243136-2243220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2238516-2238646:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2232853-2233054:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2224222-2224310:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2212884-2212978:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2212569-2212664:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2210047-2210169:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2204363-2204501:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2203388-2203447:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2202617-2202763:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2200659-2200745:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2198222-2198300:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2197888-2198027:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2195014-2195238:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2192632-2192725:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2188231-2188320:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2177347-2177446:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2177148-2177202:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2176134-2176256:-1:exon

ARHGEF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 7 isoform X7
translation: MNSAEQTVTWLIALGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSESECLSNIREFLRGCGASLRLETFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGAQPSHSRTSKLFQGQYRSLDMTDNSNSQLVVRAKFNFQQTNEDELSFTKGDVIHVTRVEEGGWWEGTHNGKTGWFPSNYVREMKPSEKPVSPKSGALKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANTSYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMKTLYLAYCANHPSAVNVLTEHSEQLGEFMEARGASSPGILVLTTGLSRPFMRLDKYPTLLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDITTLGSVVYMSQVMVQCAGSEEKNERYLLLFPNILLMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLHEWVDHLQKQTKVTSVGNPTIKPHSVPSHTLPSHPIAPSSKHADSKPVPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSTWQGTDLMHNHVLADDDQSSLDSLGRRSSLSRLEPSDLSEDSDYDSIWTAHSYRMGSTSRSRKESAPQVLLPEEEKMIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVRKVLKNMNDPAWDETNL
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(2176134..2176256,2177148..2177202,2177347..2177446,2185266..2185442,2188231..2188320,2192632..2192725,2195014..2195238,2197888..2198027,2198222..2198300,2200659..2200745,2202617..2202763,2203388..2203447,2204363..2204501,2210047..2210169,2212569..2212664,2212884..2212978,2224222..2224310,2232853..2233054,2238516..2238646,2243136..2243220,2268612..2268698,2296808..2296972))
location: region:2176134-2296972:-1
so has part: feature:2296808-2296972:-1:exon
so has part: feature:2268612-2268698:-1:exon
so has part: feature:2243136-2243220:-1:exon
so has part: feature:2238516-2238646:-1:exon
so has part: feature:2232853-2233054:-1:exon
so has part: feature:2224222-2224310:-1:exon
so has part: feature:2212884-2212978:-1:exon
so has part: feature:2212569-2212664:-1:exon
so has part: feature:2210047-2210169:-1:exon
so has part: feature:2204363-2204501:-1:exon
so has part: feature:2203388-2203447:-1:exon
so has part: feature:2202617-2202763:-1:exon
so has part: feature:2200659-2200745:-1:exon
so has part: feature:2198222-2198300:-1:exon
so has part: feature:2197888-2198027:-1:exon
so has part: feature:2195014-2195238:-1:exon
so has part: feature:2192632-2192725:-1:exon
so has part: feature:2188231-2188320:-1:exon
so has part: feature:2185266-2185442:-1:exon
so has part: feature:2177347-2177446:-1:exon
so has part: feature:2177148-2177202:-1:exon
so has part: feature:2176134-2176256:-1:exon

XP_041587309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2296808-2296972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2268612-2268698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2243136-2243220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2238516-2238646:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2232853-2233054:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2224222-2224310:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2212884-2212978:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2212569-2212664:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2210047-2210169:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2204363-2204501:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2203388-2203447:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2202617-2202763:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2200659-2200745:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2198222-2198300:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2197888-2198027:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2195014-2195238:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2192632-2192725:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2188231-2188320:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2185266-2185442:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2177347-2177446:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2177148-2177202:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2176134-2176256:-1:exon

ARHGEF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 7 isoform X3
translation: MARVACTPRPASLSSGTDHATILLNSCPGQAPVTQRAVSWSFSMVNRKSPAPPLDFTLQTFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGAQPSHSRTSKLFQGQYRSLDMTDNSNSQLVVRAKFNFQQTNEDELSFTKGDVIHVTRVEEGGWWEGTHNGKTGWFPSNYVREMKPSEKPVSPKSGALKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANTSYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMKTLYLAYCANHPSAVNVLTEHSEQLGEFMEARGASSPGILVLTTGLSRPFMRLDKYPTLLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDITTLGSVVYMSQVMVQCAGSEEKNERYLLLFPNILLMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLHEWVDHLQKQTKVTSVGNPTIKPHSVPSHTLPSHPIAPSSKHADSKPVPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSRKESAPQVLLPEEEKMIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVRKVLKNMNDPAWDETNL
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(2176134..2176256,2177148..2177202,2177347..2177446,2188231..2188320,2192632..2192725,2195014..2195238,2197888..2198027,2198222..2198300,2200659..2200745,2202617..2202763,2203388..2203447,2204363..2204501,2210047..2210169,2212569..2212664,2212884..2212978,2224222..2224310,2232853..2233054,2238516..2238646,2243136..2243220,2258763..2258939))
location: region:2176134-2258939:-1
so has part: feature:2258763-2258939:-1:exon
so has part: feature:2243136-2243220:-1:exon
so has part: feature:2238516-2238646:-1:exon
so has part: feature:2232853-2233054:-1:exon
so has part: feature:2224222-2224310:-1:exon
so has part: feature:2212884-2212978:-1:exon
so has part: feature:2212569-2212664:-1:exon
so has part: feature:2210047-2210169:-1:exon
so has part: feature:2204363-2204501:-1:exon
so has part: feature:2203388-2203447:-1:exon
so has part: feature:2202617-2202763:-1:exon
so has part: feature:2200659-2200745:-1:exon
so has part: feature:2198222-2198300:-1:exon
so has part: feature:2197888-2198027:-1:exon
so has part: feature:2195014-2195238:-1:exon
so has part: feature:2192632-2192725:-1:exon
so has part: feature:2188231-2188320:-1:exon
so has part: feature:2177347-2177446:-1:exon
so has part: feature:2177148-2177202:-1:exon
so has part: feature:2176134-2176256:-1:exon

XP_041587305.1
type: Protein
SIO_000068: ncbiprotein

position:2258939:-1
position: 2258939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2258763-2258939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2243136-2243220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2238516-2238646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2232853-2233054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2224222-2224310:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2212884-2212978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2212569-2212664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2210047-2210169:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2204363-2204501:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2203388-2203447:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2202617-2202763:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2200659-2200745:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2198222-2198300:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2197888-2198027:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2195014-2195238:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2192632-2192725:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2188231-2188320:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2177347-2177446:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2177148-2177202:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2176134-2176256:-1:exon

ARHGEF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 7 isoform X6
translation: MKTFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGAQPSHSRTSKLFQGQYRSLDMTDNSNSQLVVRAKFNFQQTNEDELSFTKGDVIHVTRVEEGGWWEGTHNGKTGWFPSNYVREMKPSEKPVSPKSGALKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANTSYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMKTLYLAYCANHPSAVNVLTEHSEQLGEFMEARGASSPGILVLTTGLSRPFMRLDKYPTLLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDITTLGSVVYMSQVMVQCAGSEEKNERYLLLFPNILLMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLHEWVDHLQKQTKVTSVGNPTIKPHSVPSHTLPSHPIAPSSKHADSKPVPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSRKESAPQVLLPEEEKMIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVRKVLKNMNDPAWDETNL
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(2176134..2176256,2177148..2177202,2177347..2177446,2188231..2188320,2192632..2192725,2195014..2195238,2197888..2198027,2198222..2198300,2200659..2200745,2202617..2202763,2203388..2203447,2204363..2204501,2210047..2210169,2212569..2212664,2212884..2212978,2224222..2224310,2232853..2233054,2238516..2238646,2243136..2243220,2245374..2245379))
location: region:2176134-2245379:-1
so has part: feature:2245374-2245379:-1:exon
so has part: feature:2243136-2243220:-1:exon
so has part: feature:2238516-2238646:-1:exon
so has part: feature:2232853-2233054:-1:exon
so has part: feature:2224222-2224310:-1:exon
so has part: feature:2212884-2212978:-1:exon
so has part: feature:2212569-2212664:-1:exon
so has part: feature:2210047-2210169:-1:exon
so has part: feature:2204363-2204501:-1:exon
so has part: feature:2203388-2203447:-1:exon
so has part: feature:2202617-2202763:-1:exon
so has part: feature:2200659-2200745:-1:exon
so has part: feature:2198222-2198300:-1:exon
so has part: feature:2197888-2198027:-1:exon
so has part: feature:2195014-2195238:-1:exon
so has part: feature:2192632-2192725:-1:exon
so has part: feature:2188231-2188320:-1:exon
so has part: feature:2177347-2177446:-1:exon
so has part: feature:2177148-2177202:-1:exon
so has part: feature:2176134-2176256:-1:exon

XP_041587308.1
type: Protein
SIO_000068: ncbiprotein

position:2245379:-1
position: 2245379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2245374-2245379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2243136-2243220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2238516-2238646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2232853-2233054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2224222-2224310:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2212884-2212978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2212569-2212664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2210047-2210169:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2204363-2204501:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2203388-2203447:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2202617-2202763:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2200659-2200745:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2198222-2198300:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2197888-2198027:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2195014-2195238:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2192632-2192725:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2188231-2188320:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2177347-2177446:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2177148-2177202:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2176134-2176256:-1:exon

ARHGEF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ARHGEF7
product: Rho guanine nucleotide exchange factor 7, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041731373.1
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(2182306..2185442,2188231..2188320,2192632..2192725,2195014..2195238,2197888..2198027,2198222..2198300,2200659..2200745,2202617..2202763,2203388..2203447,2204363..2204501,2210047..2210169,2212569..2212664,2212884..2212978,2224222..2224310,2232853..2233054,2238516..2238646,2243136..2243220,2296808..2297282))
location: region:2182306-2297282:-1
so has part: feature:2296808-2297282:-1:exon
so has part: feature:2243136-2243220:-1:exon
so has part: feature:2238516-2238646:-1:exon
so has part: feature:2232853-2233054:-1:exon
so has part: feature:2224222-2224310:-1:exon
so has part: feature:2212884-2212978:-1:exon
so has part: feature:2212569-2212664:-1:exon
so has part: feature:2210047-2210169:-1:exon
so has part: feature:2204363-2204501:-1:exon
so has part: feature:2203388-2203447:-1:exon
so has part: feature:2202617-2202763:-1:exon
so has part: feature:2200659-2200745:-1:exon
so has part: feature:2198222-2198300:-1:exon
so has part: feature:2197888-2198027:-1:exon
so has part: feature:2195014-2195238:-1:exon
so has part: feature:2192632-2192725:-1:exon
so has part: feature:2188231-2188320:-1:exon
so has part: feature:2182306-2185442:-1:exon

position:2182306:-1
position: 2182306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2296808-2297282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2243136-2243220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2238516-2238646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2232853-2233054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2224222-2224310:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2212884-2212978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2212569-2212664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2210047-2210169:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2204363-2204501:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2203388-2203447:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2202617-2202763:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2200659-2200745:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2198222-2198300:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2197888-2198027:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2195014-2195238:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2192632-2192725:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2188231-2188320:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2182306-2185442:-1:exon

ARHGEF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ARHGEF7
product: Rho guanine nucleotide exchange factor 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041731370.1
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(2182310..2185442,2188231..2188320,2192632..2192725,2195014..2195238,2197888..2198027,2198222..2198300,2200659..2200745,2202617..2202763,2203388..2203447,2204363..2204501,2210047..2210169,2212569..2212664,2212884..2212978,2224222..2224310,2232853..2233054,2238516..2238646,2243136..2243220,2268612..2268698,2296808..2297280))
location: region:2182310-2297280:-1
so has part: feature:2296808-2297280:-1:exon
so has part: feature:2268612-2268698:-1:exon
so has part: feature:2243136-2243220:-1:exon
so has part: feature:2238516-2238646:-1:exon
so has part: feature:2232853-2233054:-1:exon
so has part: feature:2224222-2224310:-1:exon
so has part: feature:2212884-2212978:-1:exon
so has part: feature:2212569-2212664:-1:exon
so has part: feature:2210047-2210169:-1:exon
so has part: feature:2204363-2204501:-1:exon
so has part: feature:2203388-2203447:-1:exon
so has part: feature:2202617-2202763:-1:exon
so has part: feature:2200659-2200745:-1:exon
so has part: feature:2198222-2198300:-1:exon
so has part: feature:2197888-2198027:-1:exon
so has part: feature:2195014-2195238:-1:exon
so has part: feature:2192632-2192725:-1:exon
so has part: feature:2188231-2188320:-1:exon
so has part: feature:2182310-2185442:-1:exon

position:2182310:-1
position: 2182310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2297280:-1
position: 2297280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2296808-2297280:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2268612-2268698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2243136-2243220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2238516-2238646:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2232853-2233054:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2224222-2224310:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2212884-2212978:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2212569-2212664:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2210047-2210169:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2204363-2204501:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2203388-2203447:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2202617-2202763:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2200659-2200745:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2198222-2198300:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2197888-2198027:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2195014-2195238:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2192632-2192725:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2188231-2188320:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2182310-2185442:-1:exon

ARHGEF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 7 isoform X5
translation: MNSAEQTVTWLIALGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKTFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGAQPSHSRTSKLFQGQYRSLDMTDNSNSQLVVRAKFNFQQTNEDELSFTKGDVIHVTRVEEGGWWEGTHNGKTGWFPSNYVREMKPSEKPVSPKSGALKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANTSYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMKTLYLAYCANHPSAVNVLTEHSEQLGEFMEARGASSPGILVLTTGLSRPFMRLDKYPTLLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDITTLGSVVYMSQVMVQCAGSEEKNERYLLLFPNILLMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLHEWVDHLQKQTKVTSVGNPTIKPHSVPSHTLPSHPIAPSSKHADSKPVPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSTWQGTDLMHNHVLADDDQSSLDSLGRRSSLSRLEPSDLSEDSDYDSIWTAHSYRMGSTSRKSCCSYISHQN
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(2185228..2185442,2188231..2188320,2192632..2192725,2195014..2195238,2197888..2198027,2198222..2198300,2200659..2200745,2202617..2202763,2203388..2203447,2204363..2204501,2210047..2210169,2212569..2212664,2212884..2212978,2224222..2224310,2232853..2233054,2238516..2238646,2243136..2243220,2296808..2296972))
location: region:2185228-2296972:-1
so has part: feature:2296808-2296972:-1:exon
so has part: feature:2243136-2243220:-1:exon
so has part: feature:2238516-2238646:-1:exon
so has part: feature:2232853-2233054:-1:exon
so has part: feature:2224222-2224310:-1:exon
so has part: feature:2212884-2212978:-1:exon
so has part: feature:2212569-2212664:-1:exon
so has part: feature:2210047-2210169:-1:exon
so has part: feature:2204363-2204501:-1:exon
so has part: feature:2203388-2203447:-1:exon
so has part: feature:2202617-2202763:-1:exon
so has part: feature:2200659-2200745:-1:exon
so has part: feature:2198222-2198300:-1:exon
so has part: feature:2197888-2198027:-1:exon
so has part: feature:2195014-2195238:-1:exon
so has part: feature:2192632-2192725:-1:exon
so has part: feature:2188231-2188320:-1:exon
so has part: feature:2185228-2185442:-1:exon

XP_041587307.1
type: Protein
SIO_000068: ncbiprotein

position:2185228:-1
position: 2185228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2296808-2296972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2243136-2243220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2238516-2238646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2232853-2233054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2224222-2224310:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2212884-2212978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2212569-2212664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2210047-2210169:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2204363-2204501:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2203388-2203447:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2202617-2202763:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2200659-2200745:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2198222-2198300:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2197888-2198027:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2195014-2195238:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2192632-2192725:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2188231-2188320:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2185228-2185442:-1:exon

ARHGEF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 7 isoform X2
translation: MNSAEQTVTWLIALGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSESECLSNIREFLRGCGASLRLETFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGAQPSHSRTSKLFQGQYRSLDMTDNSNSQLVVRAKFNFQQTNEDELSFTKGDVIHVTRVEEGGWWEGTHNGKTGWFPSNYVREMKPSEKPVSPKSGALKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANTSYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNLMPQMKTLYLAYCANHPSAVNVLTEHSEQLGEFMEARGASSPGILVLTTGLSRPFMRLDKYPTLLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDITTLGSVVYMSQVMVQCAGSEEKNERYLLLFPNILLMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLHEWVDHLQKQTKVTSVGNPTIKPHSVPSHTLPSHPIAPSSKHADSKPVPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSTWQGTDLMHNHVLADDDQSSLDSLGRRSSLSRLEPSDLSEDSDYDSIWTAHSYRMGSTSRKSCCSYISHQN
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(2185228..2185442,2188231..2188320,2192632..2192725,2195014..2195238,2197888..2198027,2198222..2198300,2200659..2200745,2202617..2202763,2203388..2203447,2204363..2204501,2210047..2210169,2212569..2212664,2212884..2212978,2224222..2224310,2232853..2233054,2238516..2238646,2243136..2243220,2268612..2268698,2296808..2296972))
location: region:2185228-2296972:-1
so has part: feature:2296808-2296972:-1:exon
so has part: feature:2268612-2268698:-1:exon
so has part: feature:2243136-2243220:-1:exon
so has part: feature:2238516-2238646:-1:exon
so has part: feature:2232853-2233054:-1:exon
so has part: feature:2224222-2224310:-1:exon
so has part: feature:2212884-2212978:-1:exon
so has part: feature:2212569-2212664:-1:exon
so has part: feature:2210047-2210169:-1:exon
so has part: feature:2204363-2204501:-1:exon
so has part: feature:2203388-2203447:-1:exon
so has part: feature:2202617-2202763:-1:exon
so has part: feature:2200659-2200745:-1:exon
so has part: feature:2198222-2198300:-1:exon
so has part: feature:2197888-2198027:-1:exon
so has part: feature:2195014-2195238:-1:exon
so has part: feature:2192632-2192725:-1:exon
so has part: feature:2188231-2188320:-1:exon
so has part: feature:2185228-2185442:-1:exon

XP_041587304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2296808-2296972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2268612-2268698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2243136-2243220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2238516-2238646:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2232853-2233054:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2224222-2224310:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2212884-2212978:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2212569-2212664:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2210047-2210169:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2204363-2204501:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2203388-2203447:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2202617-2202763:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2200659-2200745:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2198222-2198300:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2197888-2198027:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2195014-2195238:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2192632-2192725:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2188231-2188320:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2185228-2185442:-1:exon

LOC121477175
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121477175
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2336460..2336945)
location: region:2336460-2336945:-1
so has part: feature:2336460-2336945:-1:exon

121477175
type: Gene
SIO_000068: ncbigene

position:2336460:-1
position: 2336460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2336945:-1
position: 2336945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2336460-2336945:-1:exon

LOC121477175
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121477175
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC121477175
subclass of: SO_0000673
so part of: LOC121477175
location: complement(2336460..2336945)
location: region:2336460-2336945:-1
so has part: feature:2336460-2336945:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2336460-2336945:-1:exon

ANKRD10
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: ANKRD10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2379425..2412734
location: region:2379425-2412734:1
so has part: feature:2379425-2412734:1:exon
subclass of: SO_0000010

121476840
type: Gene
SIO_000068: ncbigene

position:2379425:1
position: 2379425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2412734:1
position: 2412734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2379425-2412734:1:exon

ANKRD10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ANKRD10
product: ankyrin repeat domain 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041730949.1
SIO_010081: ANKRD10
subclass of: SO_0000673
so part of: ANKRD10
location: join(2379425..2379781,2382895..2383047,2388287..2388378,2395107..2395208,2399536..2399771,2407846..2407941,2411135..2412734)
location: region:2379425-2412734:1
so has part: feature:2379425-2379781:1:exon
so has part: feature:2382895-2383047:1:exon
so has part: feature:2388287-2388378:1:exon
so has part: feature:2395107-2395208:1:exon
so has part: feature:2399536-2399771:1:exon
so has part: feature:2407846-2407941:1:exon
so has part: feature:2411135-2412734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2379425-2379781:1:exon

position:2379781:1
position: 2379781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2382895-2383047:1:exon

position:2382895:1
position: 2382895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2383047:1
position: 2383047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2388287-2388378:1:exon

position:2388287:1
position: 2388287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2388378:1
position: 2388378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2395107-2395208:1:exon

position:2395107:1
position: 2395107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2395208:1
position: 2395208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2399536-2399771:1:exon

position:2399536:1
position: 2399536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2399771:1
position: 2399771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2407846-2407941:1:exon

position:2407846:1
position: 2407846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2407941:1
position: 2407941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2411135-2412734:1:exon

position:2411135:1
position: 2411135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANKRD10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ANKRD10
product: ankyrin repeat domain 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041730950.1
SIO_010081: ANKRD10
subclass of: SO_0000673
so part of: ANKRD10
location: join(2379425..2379781,2382895..2383047,2388287..2388378,2399536..2399771,2407846..2407941,2411135..2412734)
location: region:2379425-2412734:1
so has part: feature:2379425-2379781:1:exon
so has part: feature:2382895-2383047:1:exon
so has part: feature:2388287-2388378:1:exon
so has part: feature:2399536-2399771:1:exon
so has part: feature:2407846-2407941:1:exon
so has part: feature:2411135-2412734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2379425-2379781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2382895-2383047:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2388287-2388378:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2399536-2399771:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2407846-2407941:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2411135-2412734:1:exon

ANKRD10
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 494514
gene: ANKRD10
product: ankyrin repeat domain 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005984047.1
SIO_010081: ANKRD10
so part of: ANKRD10
location: join(2379425..2379781,2382895..2383047,2388287..2388378,2395107..2395208,2399536..2399771,2407846..2410078,2411135..2411212)
location: region:2379425-2411212:1
so has part: feature:2379425-2379781:1:exon
so has part: feature:2382895-2383047:1:exon
so has part: feature:2388287-2388378:1:exon
so has part: feature:2395107-2395208:1:exon
so has part: feature:2399536-2399771:1:exon
so has part: feature:2407846-2410078:1:exon
so has part: feature:2411135-2411212:1:exon

position:2411212:1
position: 2411212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2379425-2379781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2382895-2383047:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2388287-2388378:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2395107-2395208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2399536-2399771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2407846-2410078:1:exon

position:2410078:1
position: 2410078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2411135-2411212:1:exon

ANKRD10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ANKRD10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 10 isoform X1
translation: MSTAGTGAGVEAGFSSEELLSLRFPLHRACRDGDLAALCSLLQQTPRAHLAAEDSFYGWTPVHWAAHFGKLECLIQLVRAGATLDVSTTRYAQTPAHIAAFGGHPQCLIWLIQAGASINKPDCEGETPIHKAARSGSLDCVSALVANGAHIEKSAMADPEQRWNGELPCPLPTRGHTPELLPLTGSLRNASGLTAADIAQTQGFQECTQFLLNLQNCHLSRFYDNGTINGGHQNIFPNHTSVGANRKRCLEDPEPFGVKKARTEAQSLGPCMPLGNSDVEDEADKMLVDREFAAVTDMKNSSSMSDTLTNGCVINGHLDFPSATQLNATESPNDQCLSESNGISNGLVPGRPFPSSQGSVCVNGTEEPEKTMSANAEMCGSLHLNGSPSSCVASRPSWVEDIEENLHYGHYHGFGDTAESIPELHSVVEQPSSIKGVERHGSAILGAMHLYHGS
SIO_010081: ANKRD10
subclass of: SO_0000673
so part of: ANKRD10
location: join(2379572..2379781,2382895..2383047,2388287..2388378,2395107..2395208,2399536..2399771,2407846..2407941,2411135..2411610)
location: region:2379572-2411610:1
so has part: feature:2379572-2379781:1:exon
so has part: feature:2382895-2383047:1:exon
so has part: feature:2388287-2388378:1:exon
so has part: feature:2395107-2395208:1:exon
so has part: feature:2399536-2399771:1:exon
so has part: feature:2407846-2407941:1:exon
so has part: feature:2411135-2411610:1:exon

XP_041586883.1
type: Protein
SIO_000068: ncbiprotein

position:2379572:1
position: 2379572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2411610:1
position: 2411610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2379572-2379781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2382895-2383047:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2388287-2388378:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2395107-2395208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2399536-2399771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2407846-2407941:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2411135-2411610:1:exon

ANKRD10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ANKRD10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 10 isoform X2
translation: MSTAGTGAGVEAGFSSEELLSLRFPLHRACRDGDLAALCSLLQQTPRAHLAAEDSFYGWTPVHWAAHFGKLECLIQLVRAGATLDVSTTRYAQTPAHIAAFGGHPQCLIWLIQAGASINKPDCEGETPIHKAARSGSLDCVSALVANGAHIDLRNASGLTAADIAQTQGFQECTQFLLNLQNCHLSRFYDNGTINGGHQNIFPNHTSVGANRKRCLEDPEPFGVKKARTEAQSLGPCMPLGNSDVEDEADKMLVDREFAAVTDMKNSSSMSDTLTNGCVINGHLDFPSATQLNATESPNDQCLSESNGISNGLVPGRPFPSSQGSVCVNGTEEPEKTMSANAEMCGSLHLNGSPSSCVASRPSWVEDIEENLHYGHYHGFGDTAESIPELHSVVEQPSSIKGVERHGSAILGAMHLYHGS
SIO_010081: ANKRD10
subclass of: SO_0000673
so part of: ANKRD10
location: join(2379572..2379781,2382895..2383047,2388287..2388378,2399536..2399771,2407846..2407941,2411135..2411610)
location: region:2379572-2411610:1
so has part: feature:2379572-2379781:1:exon
so has part: feature:2382895-2383047:1:exon
so has part: feature:2388287-2388378:1:exon
so has part: feature:2399536-2399771:1:exon
so has part: feature:2407846-2407941:1:exon
so has part: feature:2411135-2411610:1:exon

XP_041586884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2379572-2379781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2382895-2383047:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2388287-2388378:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2399536-2399771:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2407846-2407941:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2411135-2411610:1:exon

LOC121477107
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: LOC121477107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2448829..2449518
location: region:2448829-2449518:1
so has part: feature:2448829-2449518:1:exon

121477107
type: Gene
SIO_000068: ncbigene

position:2448829:1
position: 2448829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2449518:1
position: 2449518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2448829-2449518:1:exon

LOC121477107
type: Exon
subclass of: SO_0000147
RO_0002162: 494514
gene: LOC121477107
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121477107
subclass of: SO_0000673
so part of: LOC121477107
location: 2448829..2449518
location: region:2448829-2449518:1
so has part: feature:2448829-2449518:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2448829-2449518:1:exon

ING1
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: ING1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2512482..2518034)
location: region:2512482-2518034:-1
so has part: feature:2512482-2518034:-1:exon
subclass of: SO_0000010

121477134
type: Gene
SIO_000068: ncbigene

position:2512482:-1
position: 2512482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2518034:-1
position: 2518034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2512482-2518034:-1:exon

ING1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ING1
product: inhibitor of growth family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041731357.1
SIO_010081: ING1
subclass of: SO_0000673
so part of: ING1
location: complement(join(2512482..2513434,2517748..2518034))
location: region:2512482-2518034:-1
so has part: feature:2517748-2518034:-1:exon
so has part: feature:2512482-2513434:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2517748-2518034:-1:exon

position:2517748:-1
position: 2517748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2512482-2513434:-1:exon

position:2513434:-1
position: 2513434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ING1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: ING1
product: inhibitor of growth family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041731356.1
SIO_010081: ING1
subclass of: SO_0000673
so part of: ING1
location: complement(join(2512482..2513434,2515921..2516211))
location: region:2512482-2516211:-1
so has part: feature:2515921-2516211:-1:exon
so has part: feature:2512482-2513434:-1:exon

position:2516211:-1
position: 2516211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2515921-2516211:-1:exon

position:2515921:-1
position: 2515921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2512482-2513434:-1:exon

ING1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ING1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibitor of growth protein 1 isoform X2
translation: MLSPANGEQIHLVNYVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDEYYEKFKRETDSVQKRRVLHCIQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAHQEVNDTTGHSGKAGQDKSKSETITQAEKSNNKRSRRQRNNENRENAANNHDHDDITSGTPKEKKAKASKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAYNR
SIO_010081: ING1
subclass of: SO_0000673
so part of: ING1
location: complement(join(2512731..2513434,2517748..2517883))
location: region:2512731-2517883:-1
so has part: feature:2517748-2517883:-1:exon
so has part: feature:2512731-2513434:-1:exon

XP_041587291.1
type: Protein
SIO_000068: ncbiprotein

position:2512731:-1
position: 2512731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2517883:-1
position: 2517883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2517748-2517883:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2512731-2513434:-1:exon

ING1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 494514
gene: ING1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibitor of growth protein 1 isoform X1
translation: MAGFAVSGAVPERARESCSGCFGPCTPESCAAAAAAAAWGAPGPRGACRGAAGQHLPCCGTAAVRFGGRRLGPPRPTEILKELDEYYEKFKRETDSVQKRRVLHCIQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAHQEVNDTTGHSGKAGQDKSKSETITQAEKSNNKRSRRQRNNENRENAANNHDHDDITSGTPKEKKAKASKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAYNR
SIO_010081: ING1
subclass of: SO_0000673
so part of: ING1
location: complement(join(2512731..2513434,2515921..2516152))
location: region:2512731-2516152:-1
so has part: feature:2515921-2516152:-1:exon
so has part: feature:2512731-2513434:-1:exon

XP_041587290.1
type: Protein
SIO_000068: ncbiprotein

position:2516152:-1
position: 2516152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2515921-2516152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2512731-2513434:-1:exon

CARS2
type: Gene
subclass of: SO_0000704
RO_0002162: 494514
gene: CARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2522932..2567257
location: region:2522932-2567257:1
so has part: feature:2522932-2567257:1:exon
subclass of: SO_0000010

121476997
type: Gene
SIO_000068: ncbigene

position:2522932:1
position: 2522932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2567257:1
position: 2567257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2522932-2567257:1:exon

CARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 494514
gene: CARS2
product: cysteinyl-tRNA synthetase 2, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041731173.1
SIO_010081: CARS2
subclass of: SO_0000673
so part of: CARS2
location: join(2522932..2523484,2523701..2523751,2526540..2526657,2535644..2535715,2535832..2535937,2537815..2537898,2539983..2540112,2550925..2551058,2552983..2553050,2561927..2561993,2562610..2562748,2564287..2564410,2564924..2565022,2566602..2566808,2567095..2567257)
location: region:2522932-2567257:1
so has part: feature:2522932-2523484:1:exon
so has part: feature:2523701-2523751:1:exon
so has part: feature:2526540-2526657:1:exon
so has part: feature:2535644-2535715:1:exon
so has part: feature:2535832-2535937:1:exon
so has part: feature:2537815-2537898:1:exon
so has part: feature:2539983-2540112:1:exon
so has part: feature:2550925-2551058:1:exon
so has part: feature:2552983-2553050:1:exon
so has part: feature:2561927-2561993:1:exon
so has part: feature:2562610-2562748:1:exon
so has part: feature:2564287-2564410:1:exon
so has part: feature:2564924-2565022:1:exon
so has part: feature:2566602-2566808:1:exon
so has part: feature:2567095-2567257:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2522932-2523484:1:exon

position:2523484:1
position: 2523484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2523701-2523751:1:exon

position:2523701:1
position: 2523701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2523751:1
position: 2523751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2526540-2526657:1:exon

position:2526540:1
position: 2526540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2526657:1
position: 2526657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2535644-2535715:1:exon

position:2535644:1
position: 2535644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2535715:1
position: 2535715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2535832-2535937:1:exon

position:2535832:1
position: 2535832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2535937:1
position: 2535937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2537815-2537898:1:exon

position:2537815:1
position: 2537815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2537898:1
position: 2537898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2539983-2540112:1:exon

position:2539983:1
position: 2539983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2540112:1
position: 2540112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2550925-2551058:1:exon

position:2550925:1
position: 2550925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2551058:1
position: 2551058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2552983-2553050:1:exon

position:2552983:1
position: 2552983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2553050:1
position: 2553050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2561927-2561993:1:exon

position:2561927:1
position: 2561927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2561993:1
position: 2561993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2562610-2562748:1:exon

position:2562610:1
position: 2562610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2562748:1
position: 2562748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2564287-2564410:1:exon

position:2564287:1
position: 2564287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2564410:1
position: 2564410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2564924-2565022:1:exon