Schizosaccharomyces pombe chromosome III, complete sequence.
Schizosaccharomyces pombe (fission yeast)
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces.
The genome sequence of Schizosaccharomyces pombe
Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]]
Submitted (13-JUL-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (03-JUL-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CU329672.\nOn May 5, 2005 this sequence version replaced NC_003421.1.\nNotes:\n\nS. pombe (fission yeast) sequence and annotation are available\nfrom: (URL, http://www.genedb.org/genedb/pombe/index.jsp) (URL,\nhttp://www.sanger.ac.uk/Projects/S_pombe/)\n\nCDS are numbered using the following system eg SPAC5H10.01c. SP (S.\npombe), A (chromosome 1), c5H10 (cosmid name), .01 (first CDS), c\n(complementary strand). However, clones may have been reorientated\nsince the original submission, therefore the complementary strand\nnotation may be invalid for strand inference.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: PomBase\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
S. pombe specific UPF0321 family protein 1
GPI-anchored glycosyl hydrolase family 13 protein
non-coding RNA, poly(A)-bearing (predicted)
antisense RNA (predicted), possible alternative UTR
putative cyclin-dependent kinase regulator
putative tRNA-splicing endonuclease subunit Sen54
putative ubiquinol-cytochrome-c reductase complex core protein Qcr2
orotidine 5'-phosphate decarboxylase Ura4
intergenic RNA (predicted), possible alternative UTR
succinate dehydrogenase cytochrome B subunit
putative DNA-directed RNA polymerase III complex subunit Rpc37
putative threo-3-hydroxyaspartate ammonia-lyase
putative RNA-binding and ribosome biogenesis protein
putative signal recognition particle subunit Srp72
putative vacuolar H+-ATPase assembly protein Vma21
mitochondrial protein, human BRP44L ortholog
pseudogene wtf element Wtf3 (no methionine)
putative glucose-6-phosphate 1-dehydrogenase
putative dihydrolipoamide S-acetyltransferase E2 Lat1
translation elongation factor EF-1 alpha Ef1a-a
putative UTP-glucose-1-phosphate uridylyltransferase
putative ENTH/VHS domain-containing protein Ent3
putative transcription factor TFIIA complex small subunit
putative oligosaccharyltransferase delta subunit Swp1
putative cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp9
putative glutamine-dependent NAD(+) synthetase
CBF1/Su(H)/LAG-1 family transcription factor Cbf11
putative mitochondrial ribosomal protein subunit S8
putative steroid oxidoreductase superfamily protein
putative ubiquinol-cytochrome-c reductase complex subunit 9
putative signal recognition particle subunit protein
transcription factor TFIIH complex subunit Ssl1
putative proteasome regulatory subunit Rpn8
putative choline transmembrane transporter family protein
putative proteasome regulatory subunit Rpt4
putative U3 snoRNP-associated Cic1/Utp30 family protein
adenylyl cyclase-associated protein Cap1
putative ribosome biogenesis protein Rix1
putative metal-dependent HD domain-containing phosphohydrolase
bifunctional CMP deaminase family methyltransferase/riboflavin-specific deaminase
putative DNAJ domain-containing protein Mdj1
putative CUE domain-containing Cue1/4 family protein
PHD finger domain-containing protein Phf1
putative mitochondrial ribosomal protein subunit L4
Holliday junction resolvase subunit Mus81
putative D-3 phosphoglycerate dehydrogenase
putative CASP domain-containing family protein
putative mannan endo-1,6-alpha-mannosidase
putative tyrosine--tRNA (Tyr) ligase Yrs1
putative inositol hexakisphosphate kinase/inositol pyrophosphate synthase
putative U3 snoRNP-associated protein Utp21
putative triglyceride lipase-cholesterol esterase
putative U3 snoRNP-associated protein Rrp5
serine/threonine protein phosphatase Sds21
putative COPII cargo receptor subunit Sec23a
transcription initiation factor TFIID subunit 5
peptidyl-prolyl cis-trans isomerase Pin1
p21-activated protein kinase inhibitor Skb15
histone-like transcription factor family (CBF/NF-Y)
Pho85/PhoA-like cyclin-dependent kinase Pef1
putative NatB N-acetyltransferase complex catalytic subunit Naa20
transcription factor TFIIIC subunit Sfc4
putative mitochondrial ribosomal protein subunit L2
putative mitochondrial ribosomal protein subunit S18
putative translation release factor eRF1 family protein
putative ribosome biogenesis protein Urb1
putative proteasome maturation factor Ump1
heterotrimeric G protein beta subunit Gnr1
putative wybutosine biosynthesis protein Tyw1
DNA-directed RNA polymerase subunit Rpb6
putative mitochondrial iron ion transporter
putative non-specific DNA-binding protein Spt2
putative zf-GATA type transcription factor
nuclear telomere cap complex subunit Ten1
putative mitochondrial ribosomal protein subunit L20
putative inorganic phosphate transporter
autophagy and CVT pathway serine/threonine protein kinase Atg1
putative U5 snRNP-associated protein Prp28
putative proteasome core particle subunit beta 3 Pup3
putative U3 snoRNP-associated protein Utp13
U4/U6 x U5 tri-snRNP complex subunit Dim1
putative pig-B family GPI synthesis protein
putative TIM23 translocase complex subunit Tim23
putative mitochondrial ribosomal protein subunit L31
19S proteasome regulatory subunit rpn1302
putative Tim9-Tim10 complex subunit Tim9
putative EKC/KEOPS complex subunit Cgi121
putative COPII-coated vesicle-associated protein Emp24
human Leydig cell tumor 10 kDa protein homolog
IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamideform yltransferase
tRNA (guanine-N7-)-methyltransferase catalytic subunit Trm8
NuA4 histone acetyltransferase complex subunit Vid21
putative mitochondrial ribosomal protein subunit S37
putative proteasome core particle subunit alpha 7 Pre10
putative SUA5/yciO/yrdC family protein Sua5
putative ATP-dependent RNA helicase Ucp12
putative histone N-acetyltransferase Naa40
DNA-directed RNA polymerase complex I subunit Rpa12
putative cytochrome c oxidase subunit VIIa
putative transcription factor TFIID complex subunit 8
S. pombe specific UPF0300 family protein 5
putative phosphopantothenate-cysteine ligase
cytochrome c oxidase biogenesis protein cmc2
putative ubiquinol cytochrome-c reductase assembly protein Cbp3
TIP41-like type 2a phosphatase regulator Tip41
inositol 1,3,4,5,6-pentakisphosphate (IP5) kinase
putative mitochondrial ribosomal protein subunit L12
putative Lsk1 complex gamma subunit lsg1
putative uroporphyrinogen decarboxylase Hem12
putative thiosulfate sulfurtransferase Tum1
putative respiratory chain complex assembly protein
putative pig-C family GPI synthesis protein
Hsk1-Dfp1 kinase complex regulatory subunit Dfp1
putative cardiolipin synthase PGP phosphatase domain-containing Gep4
RhoGEF family guanine nucleotide exchange factor Rgf1
putative mitochondrial ribosomal protein subunit L37
putative ATP/CTP tRNA nucleotidyltransferase
putative transcription elongation regulator
phosphoribosylaminoimidazole carboxylase Ade6
putative transporter chaperone complex subunit vtc4
putative NAD-dependent glutamate dehydrogenase Gdh2
trichothecene 3-O-acetyltransferase pseudogene
mitotic cohesin complex non-SMC subunit Rad21
putative dolichyl-diphosphooligosaccharide--protein glycotransferase subunit Wbp1
putative NatA N-acetyltransferase complex regulatory subunit Naa15
putative NADP-specific glutamate dehydrogenase Gdh1
carbohydrate kinase domain family protein
S. pombe specific multicopy membrane protein family 1
putative dynactin complex subunit dynamitin
putative translation initiation factor eIF2B alpha subunit
protein phosphatase regulatory subunit Par1
signal recognition particle subunit Srp54
gamma-aminobutyric acid/polyamine transporter
human ATXN10 ortholog, implicated in amino acid biosynthesis
putative sulfite reductase NADPH flavoprotein subunit
putative Cu metalloregulatory transcription factor Cuf2
eRF3-like class 2 translation release factor sup35
single-stranded DNA-binding protein Ssb2
3'(2'),5'-bisphosphate nucleotidase/inositol-1,4-bisphosphate 1-phosphatase
putative uridine kinase/uracil phosphoribosyltransferase
putative serine/threonine protein kinase Ppk33
3-hydroxy-3-methylglutaryl-CoA reductase Hmg1
hexaprenyldihydroxybenzoate methyltransferase Coq3
putative U4/U5/U6 small nuclear ribonucleoprotein complex subunit
putative hydroxyacylglutathione hydrolase
putative glutathione-dependent formaldehyde dehydrogenase
putative cysteine desulfurase nifs family protein
putative alpha-1,2-mannosyltransferase Omh3
putative mitochondrial ribosomal protein subunit L9
putative tRNA dihydrouridine synthase Dus4
putative protein phosphatase regulatory subunit Ekc1
putative NatA N-acetyltransferase subunit Naa50
putative chitin synthase regulatory factor Chr2
putative dipeptide transmembrane transporter
glutamate-1-semialdehyde 2,1-aminomutase aminotransferase
putative NADH:ubiquinone reductase complex subunit
putative nucleoside 2-deoxyribosyltransferase
putative ribonucleoprotein complex protein
translation elongation factor EF-1 beta subunit (eEF1B)
putative pig-F family GPI synthesis protein
putative central kinetochore-associated family protein
putative proteasome core particle subunit alpha 2 Pre8
putative ubiquitin/metalloprotease fusion protein
putative cytochrome c oxidase subunit VIb
putative anthranilate synthase component I
putative mitochondrial ribosomal protein Mrp49
putative adenosine 5'-monophosphoramidase
putative NADPH quinone oxidoreductase/ARE-binding protein
putative ATP-dependent RNA helicase Dbp6
putative purine nucleoside transmembrane transporter
putative UBA/UAS domain-containing protein Ucp10
putative U6 snRNP-associated protein Lsm7
RNA polymerase I upstream activation factor complex subunit Spp27
putative glycerol-3-phosphate dehydrogenase Gut2
ribosomal protein lysine methyltransferase Set11
putative aspartate--tRNA (Asp) ligase Drs1
RNA polymerase II transcription elongation factor SpEAF
CBF1/Su(H)/LAG-1 family transcription factor Cbf12
putative histone lysine methyltransferase Set7
putative ubiquinol-cytochrome-c reductase complex subunit 6
integral inner nuclear membrane protein Ima1
S. pombe specific UPF0300 family protein 6
putative glutamate-cysteine ligase regulatory subunit
putative DNA polymerase alpha-associated DNA helicase A
ATP-binding cassette-type vacuolar membrane transporter Hmt1
cleavage and polyadenylation specificity factor complex-associated protein
putative shuttle craft like transcriptional regulator
CCR4-Not complex CAF1 family ribonuclease subunit Caf1
putative oligosaccharyltransferase complex zeta subunit Ost5
putative DNA-directed RNA polymerase III complex subunit Rpc53
human aprataxin homolog, involved in DNA repair (predicted)
putative pyridoxine-pyridoxal-pyridoxamine kinase
tRNA (guanine-N7-)-methyltransferase subunit Trm82
WD repeat protein, human WDR85 family, implicated in rRNA transcription
putative proteasome non-ATPase regulatory subunit
putative DNA-directed RNA polymerase III complex subunit Rpc34
mannose-1-phosphate guanyltransferase Mpg1
putative CUE domain-containing protein Cue3
putative mitochondrial ribosomal protein subunit L22
putative histone lysine methyltransferase Set5
Cut3-interacting putative exosome subunit Cti1
putative cytochrome c oxidase subunit VIa
serine/threonine protein phosphatase Ppe1
putative hydantoin racemase family protein
putative proteasome regulatory subunit Rpt3
putative pyridoxamine/pyridoxine/pyridoxal transmembrane transporter
putative mitochondrial ribosomal protein subunit L17
PHD and RING finger domain-containing protein
human CTD-binding SR-like protein rA9 homolog (predicted)
putative lectin family glycoprotein receptor
putative isoamyl acetate hydrolytic enzyme Iah1
NGG1 interacting factor 3 family protein
putative SAP128 family histone deacetylase complex subunit
putative U5 snRNP-associated protein Prp18
putative signal recognition particle subunit Sec65
putative U6 snRNP-associated core protein
putative Rab geranylgeranyltransferase alpha subunit
putative ribose-phosphate pyrophosphokinase
putative succinate-CoA ligase alpha subunit
putative transcription factor TFIIF complex alpha subunit Tfg1
putative phosphoglycerate mutase family protein
NuA4 histone acetyltransferase complex Epl1
putative calcineurin regulatory subunit B
AMP-activated protein kinase beta subunit Amk2
putative Ski complex TPR repeat subunit Ski3
putative mitochondrial ribosomal protein subunit YmL33
putative transcription factor TFIIIB complex subunit Bdp1
NAD-dependent epimerase/dehydratase family protein
putative U6 snRNP-associated protein Lsm8
putative OPT oligopeptide transporter family protein
Fe/ascorbate oxidoreductase family protein
putative transcription factor TFIID complex subunit Taf13
armadillo repeat-containing zfs1 target protein 1
putative NADP-dependent prephenate dehydrogenase Tyr1
CSN-associated deubiquitinating enzyme Ubp12
putative ATP-dependent RNA helicase Dbp9
putative serine/threonine protein kinase
putative cholinephosphate cytidylyltransferase
putative aspartate semialdehyde dehydrogenase
putative SPX/EXS domain-containing protein
putative acyl-coA-sterol acyltransferase Are2
putative Puf family RNA-binding protein Puf6
putative phosphoribosylglycinamide formyltransferase
S. pombe specific UPF0321 family protein 2