Schizosaccharomyces pombe mitochondrion, complete genome.
type: Entry
definition: Schizosaccharomyces pombe mitochondrion, complete genome.
sequence version: NC_001326.1
sequence date: 2023-04-03
sequence: sequence
division: PLN
label: NC_001326.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
keyword: apocytochrome b
keyword: ATPase
keyword: cob gene
keyword: cox gene
keyword: cytochrome b
keyword: cytochrome oxidase
keyword: large ribosomal RNA
keyword: mitochondrial genome
keyword: oxidase
keyword: ribosomal DNA
keyword: ribosomal RNA
keyword: small ribosomal RNA
keyword: transfer RNA
source: mitochondrion Schizosaccharomyces pombe (fission yeast)
organism: Schizosaccharomyces pombe
taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces.
reference: 1
references: 15811919
reference: 2
references: 2251129
reference: 3
references: 2780299
reference: 4
references: 2446871
reference: 5
references: 4046021
reference: 6
references: 6092057
reference: 7
reference: 8
reference: 9
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence was derived from X54421.\nSee <X06597> for overlapping sequence ([2]).\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 19431
topology: circular
so has quality: SO_0000988
location: 1..19431
location: region:1-19431:1
RO_0002162: 4896

NC_001326
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Transcription and RNA-processing in fission yeast mitochondria
author: Schafer, B.
author: Hansen, M.
author: Lang, B.F.
journal: RNA
volume: 11
issue: 5
pages: 785-795
year: 2005
pubmed: 15811919

15811919
type: PubMed
SIO_000068: pubmed

2
title: Nucleotide sequence of the unassigned reading frame urf a in the mitochondrial genome of three Schizosaccharomyces pombe strains
author: Zimmer, M.
author: Schiebner, T.
author: Krabusch, M.
author: Wolf, K.
journal: Nucleic Acids Res. 18 (22), 6686 (1990)
pubmed: 2251129

2251129
type: PubMed
SIO_000068: pubmed

3
title: Nucleotide sequence of the gene encoding the small ribosomal RNA in the mitochondrial genome of the fission yeast Schizosaccharomyces pombe
author: Trinkl, H.
author: Lang, B.F.
author: Wolf, K.
journal: Nucleic Acids Res. 17 (16), 6730 (1989)
pubmed: 2780299

2780299
type: PubMed
SIO_000068: pubmed

4
title: The mitochondrial genome of the fission yeast, Schizosaccharomyces pombe. Sequence of the large-subunit ribosomal RNA gene, comparison of potential secondary structure in fungal mitochondrial large-subunit rRNAs and evolutionary considerations
author: Lang, B.F.
author: Cedergren, R.
author: Gray, M.W.
journal: Eur. J. Biochem.
volume: 169
issue: 3
pages: 527-537
year: 1987
pubmed: 2446871

2446871
type: PubMed
SIO_000068: pubmed

5
title: The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene
author: Lang, B.F.
author: Ahne, F.
author: Bonen, L.
journal: J. Mol. Biol.
volume: 184
issue: 3
pages: 353-366
year: 1985
pubmed: 4046021

4046021
type: PubMed
SIO_000068: pubmed

6
title: The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans
author: Lang, B.F.
journal: EMBO J.
volume: 3
issue: 9
pages: 2129-2136
year: 1984
pubmed: 6092057

6092057
type: PubMed
SIO_000068: pubmed

7
author: Lang, B.F.
author: Ahne, F.
author: Distler, S.
author: Trinkl, H.
author: Kaudewitz, F.
author: Wolf, K.
journal: Unpublished

8
title: Direct Submission
journal: Submitted (30-NOV-2000) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

9
title: Direct Submission
author: Lang, B.F.
journal: Submitted (16-AUG-1990) Lang B.F., Departement de Biochemie, Universite de Montreal, C.P. 6128, Montreal, Quebec H3C 3J7, Canada

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

position:19431:1
position: 19431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19431:1:source
so part of: sequence
organism: Schizosaccharomyces pombe
organelle: mitochondrion
mol type: genomic DNA
strain: ad7-50h-.

4896
type: Taxonomy
SIO_000068: taxonomy

exon
type: Exon
subclass of: SO_0000147
RO_0002162: 4896
number: 1
so part of: sequence
location: <1..5289
location: region:1-5289:1
so has part: feature:1-5289:1:region

position:5289:1
position: 5289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-5289:1:region

ScpofMr11
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMr11
so part of: sequence
location: 1..2822
location: region:1-2822:1
so has part: feature:1-2822:1:exon
subclass of: SO_0000573

1669496
type: Gene
SIO_000068: ncbigene

position:2822:1
position: 2822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-2822:1:exon

ScpofMr11
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 4896
locus tag: ScpofMr11
product: large subunit ribosomal RNA
SIO_010081: ScpofMr11
subclass of: SO_0000673
so part of: ScpofMr11
location: 1..2822
location: region:1-2822:1
so has part: feature:1-2822:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-2822:1:exon

ScpofMr11
type: Miscellaneous Difference
subclass of: SO_0000413
RO_0002162: 4896
locus tag: ScpofMr11
note: conflict
citation: [4]
replace: g
SIO_010081: ScpofMr11
subclass of: SO_0000673
so part of: ScpofMr11
location: 2091
location: region:2091-2091:1
so has part: feature:2091-2091:1:exon

position:2091:1
position: 2091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2091-2091:1:exon

ScpofMt13
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt13
so part of: sequence
location: 2857..2929
location: region:2857-2929:1
so has part: feature:2857-2929:1:exon
subclass of: SO_0000663

1669497
type: Gene
SIO_000068: ncbigene

position:2857:1
position: 2857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2929:1
position: 2929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2857-2929:1:exon

ScpofMt13
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt13
product: tRNA-Lys
note: anticodon=uuu, lys
SIO_010081: ScpofMt13
subclass of: SO_0000673
so part of: ScpofMt13
location: 2857..2929
location: region:2857-2929:1
so has part: feature:2857-2929:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2857-2929:1:exon

ScpofMt14
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt14
so part of: sequence
location: 2968..3050
location: region:2968-3050:1
so has part: feature:2968-3050:1:exon
subclass of: SO_0000663

1669498
type: Gene
SIO_000068: ncbigene

position:2968:1
position: 2968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3050:1
position: 3050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2968-3050:1:exon

ScpofMt14
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt14
product: tRNA-Ser
note: anticodon=gcu, ser
SIO_010081: ScpofMt14
subclass of: SO_0000673
so part of: ScpofMt14
location: 2968..3050
location: region:2968-3050:1
so has part: feature:2968-3050:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2968-3050:1:exon

ScpofMt15
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt15
so part of: sequence
location: 3060..3130
location: region:3060-3130:1
so has part: feature:3060-3130:1:exon
subclass of: SO_0000663

1669499
type: Gene
SIO_000068: ncbigene

position:3060:1
position: 3060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3130:1
position: 3130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3060-3130:1:exon

ScpofMt15
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt15
product: tRNA-Asn
note: anticodon=guu, asn
SIO_010081: ScpofMt15
subclass of: SO_0000673
so part of: ScpofMt15
location: 3060..3130
location: region:3060-3130:1
so has part: feature:3060-3130:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3060-3130:1:exon

ScpofMr12
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMr12
so part of: sequence
location: 3131..4552
location: region:3131-4552:1
so has part: feature:3131-4552:1:exon
subclass of: SO_0000573

1669500
type: Gene
SIO_000068: ncbigene

position:3131:1
position: 3131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4552:1
position: 4552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3131-4552:1:exon

ScpofMr12
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 4896
locus tag: ScpofMr12
product: small subunit ribosomal RNA
SIO_010081: ScpofMr12
subclass of: SO_0000673
so part of: ScpofMr12
location: 3131..4552
location: region:3131-4552:1
so has part: feature:3131-4552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3131-4552:1:exon

ScpofMr12
type: Miscellaneous Difference
subclass of: SO_0000413
RO_0002162: 4896
locus tag: ScpofMr12
note: conflict
citation: [3]
replace: g
SIO_010081: ScpofMr12
subclass of: SO_0000673
so part of: ScpofMr12
location: 4102
location: region:4102-4102:1
so has part: feature:4102-4102:1:exon

position:4102:1
position: 4102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4102-4102:1:exon

ScpofMt16
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt16
so part of: sequence
location: 4591..4665
location: region:4591-4665:1
so has part: feature:4591-4665:1:exon
subclass of: SO_0000663

1669501
type: Gene
SIO_000068: ncbigene

position:4591:1
position: 4591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4665:1
position: 4665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4591-4665:1:exon

ScpofMt16
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt16
product: tRNA-Met
note: anticodon=cau, met
SIO_010081: ScpofMt16
subclass of: SO_0000673
so part of: ScpofMt16
location: 4591..4665
location: region:4591-4665:1
so has part: feature:4591-4665:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4591-4665:1:exon

ScpofMp01
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
gene: cox1
locus tag: ScpofMp01
so part of: sequence
location: 4886..8790
location: region:4886-8790:1
so has part: feature:4886-8790:1:exon
subclass of: SO_0000010

1669524
type: Gene
SIO_000068: ncbigene

position:4886:1
position: 4886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8790:1
position: 8790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4886-8790:1:exon

ScpofMp01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4896
gene: cox1
locus tag: ScpofMp01
codon start: 1
transl table: 4
product: cytochrome c oxidase 1
translation: MNSWWTYVNRWIFSTNAKDIAILYLLFGLVSGIIGSVFSFIIRMELSAPGSQFLSGNGQLYNVAISAHGILMIFFFIIPALFGAFGNYLVPLMIGAPDVAYPRVNNFTFWLLPPALMLLLISALTEEGPGGGWTVYPPLSSITSHSGPAIDLAILSLQLTGISSTLGSVNLIATMINMRAPGLSLYQMPLFAWAIMITSILLLLTLPVLAGGLFMLFSDRNLNTSFYAPEGGGDPVLYQHLFWFFGHPEVYILIMPAFGVVSHIIPSLAHKPIFGKEGMLWAMLSIALLGLMVWSHHLFTVGLDVDTRAYFSAATMVIAIPTGIKIFSWLATLTGGAIQWSRVPMLYAIGFLILFTIGGLTGVILSNSVLDIAFHDTYFVVAHFHYVLSMGALFGLCGAYYWSPKMFGLMYNETLASIQFWILFIGVNIVFGPQHFLGLNGMPRRIPDYPEAFVGWNFVSSIGSVISILSLFLFMYVMYDQFTSNRVVKTNPYLIPSYFDDNVIFVNEKLGVAQSIEWLLHSPVHEHAFNTLPTKSI
SIO_010081: ScpofMp01
subclass of: SO_0000673
so part of: ScpofMp01
location: join(4886..5289,6500..6844,7926..8790)
location: region:4886-8790:1
so has part: feature:4886-5289:1:exon
so has part: feature:6500-6844:1:exon
so has part: feature:7926-8790:1:exon

NP_039499.1
type: Protein
SIO_000068: ncbiprotein

P07657
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:4886-5289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6500-6844:1:exon

position:6500:1
position: 6500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6844:1
position: 6844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7926-8790:1:exon

position:7926:1
position: 7926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ScpofMp01
type: Intron
subclass of: SO_0000188
RO_0002162: 4896
gene: cox1
locus tag: ScpofMp01
number: 1
SIO_010081: ScpofMp01
subclass of: SO_0000673
so part of: ScpofMp01
location: 5290..6499
location: region:5290-6499:1
so has part: feature:5290-6499:1:exon

position:5290:1
position: 5290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6499:1
position: 6499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5290-6499:1:exon

ScpofMp02
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMp02
so part of: sequence
location: 5291..6445
location: region:5291-6445:1
so has part: feature:5291-6445:1:exon
subclass of: SO_0000010

1669527
type: Gene
SIO_000068: ncbigene

position:5291:1
position: 5291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6445:1
position: 6445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5291-6445:1:exon

ScpofMp02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4896
locus tag: ScpofMp02
note: intronic ORF
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKPQTKLSENSSRCEKVLYSEVITQLIYFLTSKKITNLGKIRLVKSIRDSFLSQLENILCFFLVYRTTYSFGVCLMKRFLFNKFFNRHPFTRVKSCFSSSSPSKFSFTQWLVGFTDGDGCFSISKQKIKNGKNKWSLTFKLTQNLYNYRILYFIKRNLGIGSLYKESSTNTVIYRLRRREHLKKIIDIFDQFPLLTKKYWDYYLFKKAFLILEDANLNSFEKNSKLEEIRIEKKSLKQYSPVNLEKYLTKSWLIGFIEAEGSFYLLQKSPVRIIHGFEITQNYEQPLLAQISEFLFNSQISPKIKSKKNSLITNYSLSTSSKERMLFLSSYFENCFKGVKSLEFKIWSRSLRKNYNFEQLLRARDLIRKLKNKYSRGSQHPKDK
SIO_010081: ScpofMp02
subclass of: SO_0000673
so part of: ScpofMp02
location: 5291..6445
location: region:5291-6445:1
so has part: feature:5291-6445:1:exon

NP_112417.1
type: Protein
SIO_000068: ncbiprotein

P22191
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:5291-6445:1:exon

ScpofMp01
type: Exon
subclass of: SO_0000147
RO_0002162: 4896
gene: cox1
locus tag: ScpofMp01
number: 2
SIO_010081: ScpofMp01
subclass of: SO_0000673
so part of: ScpofMp01
location: 6500..6844
location: region:6500-6844:1
so has part: feature:6500-6844:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6500-6844:1:exon

ScpofMp01
type: Intron
subclass of: SO_0000188
RO_0002162: 4896
gene: cox1
locus tag: ScpofMp01
number: 2
SIO_010081: ScpofMp01
subclass of: SO_0000673
so part of: ScpofMp01
location: 6845..7925
location: region:6845-7925:1
so has part: feature:6845-7925:1:exon

position:6845:1
position: 6845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

position:7925:1
position: 7925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6845-7925:1:exon

ScpofMp03
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMp03
so part of: sequence
location: <6845..7817
location: region:6845-7817:1
so has part: feature:6845-7817:1:exon
subclass of: SO_0000010

1669528
type: Gene
SIO_000068: ncbigene

position:7817:1
position: 7817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6845-7817:1:exon

ScpofMp03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4896
locus tag: ScpofMp03
note: intronic ORF
codon start: 2
transl table: 4
product: hypothetical protein
translation: NLIGLLTLLYAGTTWKILDKSFCFKYSKKNTRLVFIFIVKMLKQLSISAGNLLNKGTSETLRNEITTKKVSIHLPKHLKPANDSQFGHYLAGLIDGDGHFSSKQQLIIAFHSLDIQLAYYIKKQIGYGIVRKIKDKNAILFIIANSKGIERVITLINNKFRTTSKYNQIINNIFAHPRFKEFSKTITLGLNSNNNLNNHWLAGFSDADASFQIKILNRDKKIEVRLNYQIDQKKEYLLSLIKDNLGGNIGYRKSQDTYYYGSTSFGSAKKVINYFDNYHLLSSKYISYLKWRKAYLIIQENKHLTESGLSQIKKPHPYRKNIN
SIO_010081: ScpofMp03
subclass of: SO_0000673
so part of: ScpofMp03
location: <6845..7817
location: region:6845-7817:1
so has part: feature:6845-7817:1:exon

NP_039501.1
type: Protein
SIO_000068: ncbiprotein

P22190
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:6845-7817:1:exon

ScpofMp01
type: Exon
subclass of: SO_0000147
RO_0002162: 4896
gene: cox1
locus tag: ScpofMp01
number: 3
SIO_010081: ScpofMp01
subclass of: SO_0000673
so part of: ScpofMp01
location: 7926..>8790
location: region:7926-8790:1
so has part: feature:7926-8790:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7926-8790:1:exon

ScpofMt17
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt17
so part of: sequence
location: 9818..9894
location: region:9818-9894:1
so has part: feature:9818-9894:1:exon
subclass of: SO_0000663

1669502
type: Gene
SIO_000068: ncbigene

position:9818:1
position: 9818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9894:1
position: 9894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9818-9894:1:exon

ScpofMt17
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt17
product: tRNA-Arg
note: anticodon=ucu, arg
SIO_010081: ScpofMt17
subclass of: SO_0000673
so part of: ScpofMt17
location: 9818..9894
location: region:9818-9894:1
so has part: feature:9818-9894:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9818-9894:1:exon

ScpofMt18
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt18
so part of: sequence
location: 9920..9992
location: region:9920-9992:1
so has part: feature:9920-9992:1:exon
subclass of: SO_0000663

1669503
type: Gene
SIO_000068: ncbigene

position:9920:1
position: 9920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9992:1
position: 9992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9920-9992:1:exon

ScpofMt18
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt18
product: tRNA-Thr
note: anticodon=ugu, thr
SIO_010081: ScpofMt18
subclass of: SO_0000673
so part of: ScpofMt18
location: 9920..9992
location: region:9920-9992:1
so has part: feature:9920-9992:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9920-9992:1:exon

ScpofMp04
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
gene: cob
locus tag: ScpofMp04
so part of: sequence
location: 10173..13862
location: region:10173-13862:1
so has part: feature:10173-13862:1:exon
subclass of: SO_0000010

1669523
type: Gene
SIO_000068: ncbigene

position:10173:1
position: 10173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

position:13862:1
position: 13862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10173-13862:1:exon

ScpofMp04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4896
gene: cob
locus tag: ScpofMp04
codon start: 1
transl table: 4
product: cytochrome b
translation: MKILKSNPFLALANNYMIDAPEPSNISYFWNFGSLLACVLVIQIVIGILLACFYIPNMDLAFLSVERIVRDVNYGFLLRAFHANGASFFFIFLYLHIGRGLYYGSYKYPRTMTWNIGVIIFLLTIITAFLGYCLPANQMSFWGATVITNLLSAVPFIGDDLVHLLWGGFSVSNPTLNRFFSLHYLMPFVIAALSVMHLIALHTNGSSNPLGVTANMDRIPMNPYYLIKDLITIFIFLIGINYMAFYNPYGFMEPDCALPADPLKTPMSIVPEWYLLPFYAILRAIPNFQLGVIAMLLSILVLLLLPLLDFSAIRGNSFNPFGKFFFWTFVADFVILAWIGGSHPENVFITIGAIATIFYFSYFFILIPVYTILGNTLIDLNLSSIKR
SIO_010081: ScpofMp04
subclass of: SO_0000673
so part of: ScpofMp04
location: join(10173..10856,13383..13862)
location: region:10173-13862:1
so has part: feature:10173-10856:1:exon
so has part: feature:13383-13862:1:exon

NP_039502.1
type: Protein
SIO_000068: ncbiprotein

P05501
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:10173-10856:1:exon

position:10856:1
position: 10856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13383-13862:1:exon

position:13383:1
position: 13383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ScpofMp04
type: Exon
subclass of: SO_0000147
RO_0002162: 4896
gene: cob
locus tag: ScpofMp04
number: 1
SIO_010081: ScpofMp04
subclass of: SO_0000673
so part of: ScpofMp04
location: <10173..10856
location: region:10173-10856:1
so has part: feature:10173-10856:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10173-10856:1:exon

ScpofMp04
type: Intron
subclass of: SO_0000188
RO_0002162: 4896
gene: cob
locus tag: ScpofMp04
number: 1
SIO_010081: ScpofMp04
subclass of: SO_0000673
so part of: ScpofMp04
location: 10857..13382
location: region:10857-13382:1
so has part: feature:10857-13382:1:exon

position:10857:1
position: 10857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13382:1
position: 13382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10857-13382:1:exon

ScpofMp05
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMp05
so part of: sequence
location: 10857..13280
location: region:10857-13280:1
so has part: feature:10857-13280:1:exon
subclass of: SO_0000010

1669529
type: Gene
SIO_000068: ncbigene

position:13280:1
position: 13280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10857-13280:1:exon

ScpofMp05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4896
locus tag: ScpofMp05
note: intronic ORF
codon start: 1
transl table: 4
product: hypothetical protein
translation: MRRCGIYVYPHRERDILCVKIWTIHLGSWGNPMPNRACVQKVLPVTKQISSDGSVQIDTVRAVLPEFQFPSHPQIGDCLSWIETFFSRSLVGFYDQGYTPGEESCTNSTIKGMSGKPTSIISNIYTTTGPAKVSNDYAVRDPGVAVDHFDQYGPLKEGRSLNSAKISTQWSGSATLKSSNRSIFNIGLGYINTFLGVSNVRGFSTGSGRSKNVLNKLDDLSKRSKNYPNLVIDRNLYKDFLLNRDMFLIAYNKLKSNPGMMTHGLKPDTLDGMSIDVIDKIIQSLKSEEFNFTPGRRILIDKASGGKRPLTIGSPRDKLVQEILRIVLEAIYEPLFNTASHGFRPGRSCHSALRSIFTNFKGCTWWIEGDIKACFDSIPHDKLIALLSSKIKDQRFIQLIRKALNAGYLTENRYKYDIVGTPQGSIVSPILANIYLHQLDEFIENLKSEFDYKGPIARKRTSESRHLHYLMAKAKRENADSKTIRKIAIEMRNVPNKIHGIQSNKLMYVRYADDWIVAVNGSYTQTKEILAKITCFCSSIGLTVSPTKTKITNSYTDKILFLGTNISHSKNVTFSRHFGILQRNSGFILLSAPMDRIAKKLRETGLMLNHKGRSVIRWLPLDVRQIIGLANSIIRGYDNYYSFVHNRGRFATYVYFIIKDCVLRTLAHKLSLGTRMKVIKKFGPDLSIYDYNSRDENNKPKLITQLFKPSWKVNVWGFKSDKVKLNIRTLYASHLSMANLENLQCAACQSTYKVEMHHVRQMKNLKPIKGTLDYLMAKANRKQIPLCRSCHMKLHANKLTLNEDKKV
SIO_010081: ScpofMp05
subclass of: SO_0000673
so part of: ScpofMp05
location: 10857..13280
location: region:10857-13280:1
so has part: feature:10857-13280:1:exon

NP_039503.1
type: Protein
SIO_000068: ncbiprotein

P05511
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:10857-13280:1:exon

ScpofMp04
type: Exon
subclass of: SO_0000147
RO_0002162: 4896
gene: cob
locus tag: ScpofMp04
number: 2
SIO_010081: ScpofMp04
subclass of: SO_0000673
so part of: ScpofMp04
location: 13383..>13862
location: region:13383-13862:1
so has part: feature:13383-13862:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13383-13862:1:exon

ScpofMt19
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt19
so part of: sequence
location: 14081..14153
location: region:14081-14153:1
so has part: feature:14081-14153:1:exon
subclass of: SO_0000663

1669504
type: Gene
SIO_000068: ncbigene

position:14081:1
position: 14081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14153:1
position: 14153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14081-14153:1:exon

ScpofMt19
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt19
product: tRNA-Met
note: anticodon=cau, fmet
SIO_010081: ScpofMt19
subclass of: SO_0000673
so part of: ScpofMt19
location: 14081..14153
location: region:14081-14153:1
so has part: feature:14081-14153:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14081-14153:1:exon

ScpofMt20
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt20
so part of: sequence
location: 14159..14230
location: region:14159-14230:1
so has part: feature:14159-14230:1:exon
subclass of: SO_0000663

1669505
type: Gene
SIO_000068: ncbigene

position:14159:1
position: 14159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14230:1
position: 14230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14159-14230:1:exon

ScpofMt20
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt20
product: tRNA-Phe
note: anticodon=gaa, phe
SIO_010081: ScpofMt20
subclass of: SO_0000673
so part of: ScpofMt20
location: 14159..14230
location: region:14159-14230:1
so has part: feature:14159-14230:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14159-14230:1:exon

ScpofMt21
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt21
so part of: sequence
location: 14238..14308
location: region:14238-14308:1
so has part: feature:14238-14308:1:exon
subclass of: SO_0000663

1669506
type: Gene
SIO_000068: ncbigene

position:14238:1
position: 14238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14308:1
position: 14308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14238-14308:1:exon

ScpofMt21
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt21
product: tRNA-Asp
note: anticodon=guc, asp
SIO_010081: ScpofMt21
subclass of: SO_0000673
so part of: ScpofMt21
location: 14238..14308
location: region:14238-14308:1
so has part: feature:14238-14308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14238-14308:1:exon

ScpofMt22
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt22
so part of: sequence
location: 14314..14385
location: region:14314-14385:1
so has part: feature:14314-14385:1:exon
subclass of: SO_0000663

1669507
type: Gene
SIO_000068: ncbigene

position:14314:1
position: 14314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14385:1
position: 14385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14314-14385:1:exon

ScpofMt22
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt22
product: tRNA-Gly
note: anticodon=ucc, gly
SIO_010081: ScpofMt22
subclass of: SO_0000673
so part of: ScpofMt22
location: 14314..14385
location: region:14314-14385:1
so has part: feature:14314-14385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14314-14385:1:exon

ScpofMt23
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt23
so part of: sequence
location: 14394..14476
location: region:14394-14476:1
so has part: feature:14394-14476:1:exon
subclass of: SO_0000663

1669508
type: Gene
SIO_000068: ncbigene

position:14394:1
position: 14394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14476:1
position: 14476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14394-14476:1:exon

ScpofMt23
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt23
product: tRNA-Leu
note: anticodon=uaa, leu
SIO_010081: ScpofMt23
subclass of: SO_0000673
so part of: ScpofMt23
location: 14394..14476
location: region:14394-14476:1
so has part: feature:14394-14476:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14394-14476:1:exon

ScpofMt24
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt24
so part of: sequence
location: 14492..14563
location: region:14492-14563:1
so has part: feature:14492-14563:1:exon
subclass of: SO_0000663

1669509
type: Gene
SIO_000068: ncbigene

position:14492:1
position: 14492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14563:1
position: 14563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14492-14563:1:exon

ScpofMt24
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt24
product: tRNA-Trp
note: anticodon=cca, trp
SIO_010081: ScpofMt24
subclass of: SO_0000673
so part of: ScpofMt24
location: 14492..14563
location: region:14492-14563:1
so has part: feature:14492-14563:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14492-14563:1:exon

ScpofMt25
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt25
so part of: sequence
location: 14596..14669
location: region:14596-14669:1
so has part: feature:14596-14669:1:exon
subclass of: SO_0000663

1669510
type: Gene
SIO_000068: ncbigene

position:14596:1
position: 14596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14669:1
position: 14669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14596-14669:1:exon

ScpofMt25
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt25
product: tRNA-Leu
note: anticodon=uag, leu
SIO_010081: ScpofMt25
subclass of: SO_0000673
so part of: ScpofMt25
location: 14596..14669
location: region:14596-14669:1
so has part: feature:14596-14669:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14596-14669:1:exon

ScpofMp06
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMp06
so part of: sequence
location: 14756..15529
location: region:14756-15529:1
so has part: feature:14756-15529:1:exon
subclass of: SO_0000010

1669530
type: Gene
SIO_000068: ncbigene

position:14756:1
position: 14756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15529:1
position: 15529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14756-15529:1:exon

ScpofMp06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4896
locus tag: ScpofMp06
codon start: 1
transl table: 4
product: ATPase6
translation: MFITSPLEQFELNNYFGFYLFNYHFDFSNFGFYLGLSALIAISLAIINLTPYGSGAKIVPQKFGIAMEAIYFTMLNLVENQIHSSKTVSGQSYFPFIWSLFVLILFSNLLRLIPYGYATTAQLIFTLGLSISILIGATILGLQQHKAKVFGLFLPSGTPTPLIPLLVLIEFVSYIARGLSLGIRLGANIIAGHLTMSILGGLIFTFMGLNLITFIIGFLPITVLVAISLLEFGIAFIQAYVFAILTCGFINDSLNLH
SIO_010081: ScpofMp06
subclass of: SO_0000673
so part of: ScpofMp06
location: 14756..15529
location: region:14756-15529:1
so has part: feature:14756-15529:1:exon

NP_039504.1
type: Protein
SIO_000068: ncbiprotein

P21535
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:14756-15529:1:exon

ScpofMt26
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt26
so part of: sequence
location: 15550..15622
location: region:15550-15622:1
so has part: feature:15550-15622:1:exon
subclass of: SO_0000663

1669511
type: Gene
SIO_000068: ncbigene

position:15550:1
position: 15550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15622:1
position: 15622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15550-15622:1:exon

ScpofMt26
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt26
product: tRNA-His
note: anticodon=gug, his
SIO_010081: ScpofMt26
subclass of: SO_0000673
so part of: ScpofMt26
location: 15550..15622
location: region:15550-15622:1
so has part: feature:15550-15622:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15550-15622:1:exon

ScpofMt27
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt27
so part of: sequence
location: 15661..15735
location: region:15661-15735:1
so has part: feature:15661-15735:1:exon
subclass of: SO_0000663

1669512
type: Gene
SIO_000068: ncbigene

position:15661:1
position: 15661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15735:1
position: 15735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15661-15735:1:exon

ScpofMt27
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt27
product: tRNA-Pro
note: anticodon=ugg, pro
SIO_010081: ScpofMt27
subclass of: SO_0000673
so part of: ScpofMt27
location: 15661..15735
location: region:15661-15735:1
so has part: feature:15661-15735:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15661-15735:1:exon

ScpofMt28
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt28
so part of: sequence
location: 15747..15819
location: region:15747-15819:1
so has part: feature:15747-15819:1:exon
subclass of: SO_0000663

1669513
type: Gene
SIO_000068: ncbigene

position:15747:1
position: 15747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15819:1
position: 15819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15747-15819:1:exon

ScpofMt28
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt28
product: tRNA-Gln
note: anticodon=uug, gln
SIO_010081: ScpofMt28
subclass of: SO_0000673
so part of: ScpofMt28
location: 15747..15819
location: region:15747-15819:1
so has part: feature:15747-15819:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15747-15819:1:exon

ScpofMp07
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMp07
note: unassigned reading frame a
so part of: sequence
location: 15954..16637
location: region:15954-16637:1
so has part: feature:15954-16637:1:exon
subclass of: SO_0000010

1669526
type: Gene
SIO_000068: ncbigene

position:15954:1
position: 15954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16637:1
position: 16637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15954-16637:1:exon

ScpofMp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4896
locus tag: ScpofMp07
note: urf a; unassigned reading frame a
codon start: 1
transl table: 4
product: hypothetical protein
translation: MQKNNLKNLITTIVTNAFFNQKANFSIPLKGVIGEKRPSILIGNININFKSDSLIEVSFPYYPLLNKNYPNPSIISNIIQKALSNHLLYSSKNYSFIVNIRALPISTPYGSSLIFSKYIAIIIGSNPKIASTLWIDPKRFINLPKLQSDSIFKILGLNVPKGWKGIHISLNLIKWNSLSSRGRITNIIKGSVPLTNNSNGYDESSLAIYSKMGTIQIKVRLSYSSNL
SIO_010081: ScpofMp07
subclass of: SO_0000673
so part of: ScpofMp07
location: 15954..16637
location: region:15954-16637:1
so has part: feature:15954-16637:1:exon

NP_039505.1
type: Protein
SIO_000068: ncbiprotein

P21547
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:15954-16637:1:exon

ScpofMt29
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt29
so part of: sequence
location: 16662..16734
location: region:16662-16734:1
so has part: feature:16662-16734:1:exon
subclass of: SO_0000663

1669514
type: Gene
SIO_000068: ncbigene

position:16662:1
position: 16662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16734:1
position: 16734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16662-16734:1:exon

ScpofMt29
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt29
product: tRNA-Ile
note: anticodon=gau, ile
SIO_010081: ScpofMt29
subclass of: SO_0000673
so part of: ScpofMt29
location: 16662..16734
location: region:16662-16734:1
so has part: feature:16662-16734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16662-16734:1:exon

ScpofMp08
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMp08
so part of: sequence
location: 16914..17060
location: region:16914-17060:1
so has part: feature:16914-17060:1:exon
subclass of: SO_0000010

1669531
type: Gene
SIO_000068: ncbigene

position:16914:1
position: 16914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17060:1
position: 17060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16914-17060:1:exon

ScpofMp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4896
locus tag: ScpofMp08
codon start: 1
transl table: 4
product: ATPase 8
translation: MPQLVPFYFINILSFGFLIFTVLLYISSVYVLPRYNELFISRSIISSL
SIO_010081: ScpofMp08
subclass of: SO_0000673
so part of: ScpofMp08
location: 16914..17060
location: region:16914-17060:1
so has part: feature:16914-17060:1:exon

NP_039506.1
type: Protein
SIO_000068: ncbiprotein

P21536
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:16914-17060:1:exon

ScpofMt30
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt30
so part of: sequence
location: 17082..17150
location: region:17082-17150:1
so has part: feature:17082-17150:1:exon
subclass of: SO_0000663

1669515
type: Gene
SIO_000068: ncbigene

position:17082:1
position: 17082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17150:1
position: 17150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17082-17150:1:exon

ScpofMt30
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt30
product: tRNA-Cys
note: anticodon=gca, cys
SIO_010081: ScpofMt30
subclass of: SO_0000673
so part of: ScpofMt30
location: 17082..17150
location: region:17082-17150:1
so has part: feature:17082-17150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17082-17150:1:exon

ScpofMt31
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt31
so part of: sequence
location: 17166..17238
location: region:17166-17238:1
so has part: feature:17166-17238:1:exon
subclass of: SO_0000663

1669516
type: Gene
SIO_000068: ncbigene

position:17166:1
position: 17166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17238:1
position: 17238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17166-17238:1:exon

ScpofMt31
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt31
product: tRNA-Val
note: anticodon=uac, val
SIO_010081: ScpofMt31
subclass of: SO_0000673
so part of: ScpofMt31
location: 17166..17238
location: region:17166-17238:1
so has part: feature:17166-17238:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17166-17238:1:exon

ScpofMt32
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt32
so part of: sequence
location: 17257..17342
location: region:17257-17342:1
so has part: feature:17257-17342:1:exon
subclass of: SO_0000663

1669517
type: Gene
SIO_000068: ncbigene

position:17257:1
position: 17257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17342:1
position: 17342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17257-17342:1:exon

ScpofMt32
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt32
product: tRNA-Tyr
note: anticodon=gua, tyr
SIO_010081: ScpofMt32
subclass of: SO_0000673
so part of: ScpofMt32
location: 17257..17342
location: region:17257-17342:1
so has part: feature:17257-17342:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17257-17342:1:exon

ScpofMt33
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt33
so part of: sequence
location: 17460..17532
location: region:17460-17532:1
so has part: feature:17460-17532:1:exon
subclass of: SO_0000663

1669518
type: Gene
SIO_000068: ncbigene

position:17460:1
position: 17460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17532:1
position: 17532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17460-17532:1:exon

ScpofMt33
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt33
product: tRNA-Arg
note: anticodon=ucg, arg
SIO_010081: ScpofMt33
subclass of: SO_0000673
so part of: ScpofMt33
location: 17460..17532
location: region:17460-17532:1
so has part: feature:17460-17532:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17460-17532:1:exon

ScpofMt34
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt34
so part of: sequence
location: 17542..17613
location: region:17542-17613:1
so has part: feature:17542-17613:1:exon
subclass of: SO_0000663

1669519
type: Gene
SIO_000068: ncbigene

position:17542:1
position: 17542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17613:1
position: 17613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17542-17613:1:exon

ScpofMt34
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt34
product: tRNA-Ile
note: anticodon=cau, ile
SIO_010081: ScpofMt34
subclass of: SO_0000673
so part of: ScpofMt34
location: 17542..17613
location: region:17542-17613:1
so has part: feature:17542-17613:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17542-17613:1:exon

ScpofMt35
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt35
so part of: sequence
location: 17635..17716
location: region:17635-17716:1
so has part: feature:17635-17716:1:exon
subclass of: SO_0000663

1669520
type: Gene
SIO_000068: ncbigene

position:17635:1
position: 17635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17716:1
position: 17716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17635-17716:1:exon

ScpofMt35
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt35
product: tRNA-Ser
note: anticodon=uga, ser
SIO_010081: ScpofMt35
subclass of: SO_0000673
so part of: ScpofMt35
location: 17635..17716
location: region:17635-17716:1
so has part: feature:17635-17716:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17635-17716:1:exon

ScpofMp09
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMp09
so part of: sequence
location: 17806..18030
location: region:17806-18030:1
so has part: feature:17806-18030:1:exon
subclass of: SO_0000010

1669532
type: Gene
SIO_000068: ncbigene

position:17806:1
position: 17806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18030:1
position: 18030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17806-18030:1:exon

ScpofMp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4896
locus tag: ScpofMp09
codon start: 1
transl table: 4
product: ATPase 9
translation: MIQAAKYIGAGLATIGVSGAGVGIGLIFSNLISGTSRNPSVRPHLFSMAILGFALTEATGLFCLMLAFLIIYAA
SIO_010081: ScpofMp09
subclass of: SO_0000673
so part of: ScpofMp09
location: 17806..18030
location: region:17806-18030:1
so has part: feature:17806-18030:1:exon

NP_039507.1
type: Protein
SIO_000068: ncbiprotein

P21537
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:17806-18030:1:exon

ScpofMt36
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt36
so part of: sequence
location: 18057..18129
location: region:18057-18129:1
so has part: feature:18057-18129:1:exon
subclass of: SO_0000663

1669521
type: Gene
SIO_000068: ncbigene

position:18057:1
position: 18057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18129:1
position: 18129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18057-18129:1:exon

ScpofMt36
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt36
product: tRNA-Ala
note: anticodon=ugc, ala
SIO_010081: ScpofMt36
subclass of: SO_0000673
so part of: ScpofMt36
location: 18057..18129
location: region:18057-18129:1
so has part: feature:18057-18129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18057-18129:1:exon

ScpofMr38
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
gene: RnpB
locus tag: ScpofMr38
so part of: sequence
location: 18130..18403
location: region:18130-18403:1
so has part: feature:18130-18403:1:exon

4397541
type: Gene
SIO_000068: ncbigene

position:18130:1
position: 18130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18403:1
position: 18403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18130-18403:1:exon

ScpofMr38
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 4896
gene: RnpB
locus tag: ScpofMr38
product: RNase P
SIO_010081: ScpofMr38
so part of: ScpofMr38
location: 18130..18403
location: region:18130-18403:1
so has part: feature:18130-18403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18130-18403:1:exon

ScpofMt37
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
locus tag: ScpofMt37
so part of: sequence
location: 18404..18475
location: region:18404-18475:1
so has part: feature:18404-18475:1:exon
subclass of: SO_0000663

1669522
type: Gene
SIO_000068: ncbigene

position:18404:1
position: 18404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18475:1
position: 18475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18404-18475:1:exon

ScpofMt37
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4896
locus tag: ScpofMt37
product: tRNA-Glu
note: anticodon=uuc, glu
SIO_010081: ScpofMt37
subclass of: SO_0000673
so part of: ScpofMt37
location: 18404..18475
location: region:18404-18475:1
so has part: feature:18404-18475:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18404-18475:1:exon

ScpofMp10
type: Gene
subclass of: SO_0000704
RO_0002162: 4896
gene: cox2
locus tag: ScpofMp10
so part of: sequence
location: 18561..19307
location: region:18561-19307:1
so has part: feature:18561-19307:1:exon
subclass of: SO_0000010

1669525
type: Gene
SIO_000068: ncbigene

position:18561:1
position: 18561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19307:1
position: 19307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18561-19307:1:exon

ScpofMp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4896
gene: cox2
locus tag: ScpofMp10
codon start: 1
transl table: 4
product: cytochrome c oxidase 2
translation: MLFFNSILNDAPSSWALYFQDGASPSYLGVTHLNDYLMFYLTFIFIGVIYAICKAVIEYNYNSHPIAAKYTTHGSIVEFIWTLIPALILILVALPSFKLLYLLDEVQKPSMTVKAIGRQWFWSYELNDFVTNENEPVSFDSYMVPEEDLEEGSLRQLEVDNRLVLPIDTRIRLILTSGDVIHSWAVPSLGIKCDCIPSRLNQVSLSIDREGLFYGQCSELCGVLHSSMPIVVQGVSLEDFLAWLEENS
SIO_010081: ScpofMp10
subclass of: SO_0000673
so part of: ScpofMp10
location: 18561..19307
location: region:18561-19307:1
so has part: feature:18561-19307:1:exon

NP_039508.1
type: Protein
SIO_000068: ncbiprotein

P21534
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:18561-19307:1:exon