Xanthomonas fragariae strain PD885 chromosome 1, complete sequence.
type: Entry
definition: Xanthomonas fragariae strain PD885 chromosome 1, complete sequence.
sequence version: NZ_LT853882.1
sequence date: 2023-03-25
sequence: sequence
division: CON
label: NZ_LT853882.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMEA104068692
keyword: RefSeq
source: Xanthomonas fragariae
organism: Xanthomonas fragariae
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLT853882.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/25/2023 20:08:19\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,084\nCDSs (total) :: 3,940\nGenes (coding) :: 3,292\nCDSs (with protein) :: 3,292\nGenes (RNA) :: 144\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 52\nncRNAs :: 86\nPseudo Genes (total) :: 648\nCDSs (without protein) :: 648\nPseudo Genes (ambiguous residues) :: 0 of 648\nPseudo Genes (frameshifted) :: 393 of 648\nPseudo Genes (incomplete) :: 414 of 648\nPseudo Genes (internal stop) :: 173 of 648\nPseudo Genes (multiple problems) :: 272 of 648\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000340
sequence length: 4272102
topology: circular
so has quality: SO_0000988
location: 1..4272102
location: region:1-4272102:1
RO_0002162: 48664

NZ_LT853882
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMEA104068692
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Blom, J.
journal: Submitted (11-MAY-2017) JLU, JLU, Justus-Liebig-University Giessen, Bioinformatics and Systems Biology, Heinrich-Buff-Ring 58, 35392 Giessen, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4272102:1
position: 4272102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-4272102:1:source
so part of: sequence
organism: Xanthomonas fragariae
mol type: genomic DNA
strain: PD885
type material: type strain of Xanthomonas fragariae
chromosome: 1

48664
type: Taxonomy
SIO_000068: taxonomy

PD885_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: dnaA
locus tag: PD885_RS00005
old locus tag: PD885_00001
so part of: sequence
location: 1..1329
location: region:1-1329:1
so has part: feature:1-1329:1:exon
subclass of: SO_0000010

61892483
type: Gene
SIO_000068: ncbigene

position:1329:1
position: 1329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1329:1:exon

PD885_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: dnaA
locus tag: PD885_RS00005
old locus tag: PD885_00001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011050021.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosomal replication initiator protein DnaA
translation: MDAWPRCLERLEAEFPPEDVHTWLKPLQAEDRGDSIVLYAPNAFIVDQVRERYLARIRELLTYFAGNGDVALAVGSRPRAPDPLPAPMTAPCAPVAVPIVPFAGNLDSHYTFANFVEGRSNQLGLAAAIQAAQKPGDRAHNPLLLYGSTGLGKTHLMFAAGNALRRANPASKVMYLRSEQFFSAMIRALQDKAMDQFKRQFQQIDALLIDDIQFFAGKDRTQEEFFHTFNALFDGRQQIILTCDRYPREVEGLEPRLKSRLAWGLSVAIDPPDFETRAAIVLAKARERGAEIPDDVAFLIAKKMRSNVRDLEGALNTLVARANFTGRSITVEFAQETLRDLLRAQQQAIGIPNIQKTVADYYGLQMKDLLSKRRTRSLARPRQVAMALTKELTEHSLPEIGDAFAGRDHTTVLHACRQIRTLMEADGKLREDWEKLIRKLSE
SIO_010081: PD885_RS00005
subclass of: SO_0000673
so part of: PD885_RS00005
location: 1..1329
location: region:1-1329:1
so has part: feature:1-1329:1:exon

WP_002805910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1329:1:exon

PD885_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: dnaN
locus tag: PD885_RS00010
old locus tag: PD885_00002
so part of: sequence
location: 1606..2706
location: region:1606-2706:1
so has part: feature:1606-2706:1:exon
subclass of: SO_0000010

61892484
type: Gene
SIO_000068: ncbigene

position:1606:1
position: 1606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2706:1
position: 2706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1606-2706:1:exon

PD885_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: dnaN
locus tag: PD885_RS00010
old locus tag: PD885_00002
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006451791.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MRFTLQREAFLKPLAQVVNVVERRQTLPVLANLLVHVKDGEVSLTGTDLEVEMISRTMVEDAQDGETTIPARKLFDIVRALPDGSRVTILQTGDKVTVQAGRSRFTLATLPATDFPSVDEVEATERVVVPEAGLKELIERTAFAMAQQDVRYYLNGLLFDLRDGLLRCVATDGHRLALCEMDLEKAGGAKRQIIVPRKGVTELQRLLEGTDRDVELEVGRSHIRVKRGDVTFTSKLIDGRFPDYETVIPIGADHEVKVDREALRSSLQRAAILSNEKYRGVRVEISPGQLKISAHNPEQEEAQEEIEADTKVDDLAIGFNVNYLLDALSALRDEHVVIQLRDANSSALVREASSEKSRHVVMPLRL
SIO_010081: PD885_RS00010
subclass of: SO_0000673
so part of: PD885_RS00010
location: 1606..2706
location: region:1606-2706:1
so has part: feature:1606-2706:1:exon

WP_002805913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1606-2706:1:exon

PD885_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00015
pseudo: true
so part of: sequence
location: 2800..3785
location: region:2800-3785:1
so has part: feature:2800-3785:1:exon
subclass of: SO_0000010

61892485
type: Gene
SIO_000068: ncbigene

position:2800:1
position: 2800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3785:1
position: 3785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2800-3785:1:exon

PD885_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611254.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase domain-containing protein
SIO_010081: PD885_RS00015
subclass of: SO_0000673
so part of: PD885_RS00015
location: 2800..3785
location: region:2800-3785:1
so has part: feature:2800-3785:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2800-3785:1:exon

PD885_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: recF
locus tag: PD885_RS00020
old locus tag: PD885_00005
so part of: sequence
location: 4456..5562
location: region:4456-5562:1
so has part: feature:4456-5562:1:exon
subclass of: SO_0000010

61892486
type: Gene
SIO_000068: ncbigene

position:4456:1
position: 4456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5562:1
position: 5562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4456-5562:1:exon

PD885_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: recF
locus tag: PD885_RS00020
old locus tag: PD885_00005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035261.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA replication/repair protein RecF
translation: MHVVRLSIHRLRRFETVELCPASSLNLLTGDNGAGKTSVLEALHVMAYGRSFRGRVRDGLIQQGASDLEVFVEWRERSGEAGQRSRRAGLRHSGREWTGRLDGEDVTQLGALCAALAVVTFEPGSHVLISGGGEPRRRFLDWGLFHVEPDFLALWRRYARALKQRNVLLKQGAQPRMLDAWDHELAESGETLTSRRLRYLERLQDRLIPMANAIAPSLNLSVLSFAPGWKHHEVSLADALFLARERDCQNGYTSQGPHRADWVPVFDVLPGKDALSRGQAKLTALACLLAQAEDFAYERGEWPVIALDDLGSELDRHHQARVLQRLASAPAQVLITATEIPPGLADAGALLHRFHVEHGQVIIHTSSD
SIO_010081: PD885_RS00020
subclass of: SO_0000673
so part of: PD885_RS00020
location: 4456..5562
location: region:4456-5562:1
so has part: feature:4456-5562:1:exon

WP_002805917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4456-5562:1:exon

PD885_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: gyrB
locus tag: PD885_RS00025
old locus tag: PD885_00006
so part of: sequence
location: 5677..8121
location: region:5677-8121:1
so has part: feature:5677-8121:1:exon
subclass of: SO_0000010

61892487
type: Gene
SIO_000068: ncbigene

position:5677:1
position: 5677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8121:1
position: 8121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5677-8121:1:exon

PD885_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: gyrB
locus tag: PD885_RS00025
old locus tag: PD885_00006
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005912438.1
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit B
translation: MTDERNTPATPNGTYDSSKITVLRGLEAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSVDEALAGHADDIVVKILVDGSVAVSDNGRGVPVDIHKEEGVSAAEVILTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEHLWLDIWRDGFHYQQEYALGEPQYPLKQLEASTKRGTTLRFKPAVAIFSDVEFHYEILARRLRELSFLNSGVKIALIDERGEGRRDDFHYEGGIRSFVEHLAQLKSPLHPNVISVTGEHNGIVVDVALQWTDAYQETMYCFTNNIPQKDGGTHLAGFRAALTRVLSNYIEQNGIAKQAKVALTGDDMREGMIAVLSVKVPDPSFSSQTKEKLVSSDVRPAVENAFGARLQEFLQENPNEAKAITGKIVDAARAREAARKARDLTRRKGALDIAGLPGKLADCQEKDPALSELFIVEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLASDQVGTLITALGTGIGRDEYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIGLPPLYKLKQGKSELYLKDDAALNAYLASNAVEGAALIPATGEPPITGEALEKLLMLFTSANEAIARNAHRYDPALLTALIDLPPLDVEKLQAEGDQHPTLDALQAVLNRGTLGTARYQLRFDPATENTAATLIAIRRHMGEEFTQVLPMGVFESGELRPLRDVSLALHDLVREGAQIVRGNKTHPITSFAQAHAWLLEEAKKGRQVQRFKGLGEMNAEQLWETTVNPDTRRLLQVRIEDAVAADQIFSTLMGDVVEPRREFIEDNALKVSNLDI
SIO_010081: PD885_RS00025
subclass of: SO_0000673
so part of: PD885_RS00025
location: 5677..8121
location: region:5677-8121:1
so has part: feature:5677-8121:1:exon

WP_002805919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5677-8121:1:exon

PD885_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00030
old locus tag: PD885_00007
so part of: sequence
location: 8189..9025
location: region:8189-9025:1
so has part: feature:8189-9025:1:exon
subclass of: SO_0000010

61892488
type: Gene
SIO_000068: ncbigene

position:8189:1
position: 8189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9025:1
position: 9025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8189-9025:1:exon

PD885_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00030
old locus tag: PD885_00007
EC number: 3.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007971885.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CPBP family intramembrane metalloprotease
translation: MSTDFPPLPAPHTASGKLPLLPVLVGFSIDVLIATGLLLTLSVAGFALWGGVRGFSHVQAAKAQGLTLSSPEIMAAIGQPGVAVQLLSALVSTATPAVLLYYWRRRATPVEHAASRAAIRRASTWGCTGLIAAAVFLLSNLVGATASALGIKPAPTNLPLMEEAIKQWPVALVLFAVVIAPAYEELLFRRVLFGRLLSAGRPWLGIALSSAIFALVHEVPGISGNGPAAIAQLWLVYGSMGAAFAWLYWRTGTLWAPIAAHGINNATALAALYFFGLG
SIO_010081: PD885_RS00030
subclass of: SO_0000673
so part of: PD885_RS00030
location: 8189..9025
location: region:8189-9025:1
so has part: feature:8189-9025:1:exon

WP_002805921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8189-9025:1:exon

PD885_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00035
old locus tag: PD885_00008
so part of: sequence
location: 9088..9894
location: region:9088-9894:1
so has part: feature:9088-9894:1:exon
subclass of: SO_0000010

61892489
type: Gene
SIO_000068: ncbigene

position:9088:1
position: 9088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9894:1
position: 9894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9088-9894:1:exon

PD885_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00035
old locus tag: PD885_00008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016901838.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M48 family metallopeptidase
translation: MKARLLIVVAVLALTACATTTSPTGRRQVAGGVSQQQLDQLGAQSFAQTKAKEKVSTDGRQNAYVQCVVNALVAQLQPQWRQTRWETALFVDDEANAFALPGGKMGVNTGIFTVAKTQDQLAAVLGHEIGHVISRHHEERITRQLGAQTGLDIIGALAGTAYGDGAASAVNQVGGMTAQTVFLLPGSRTQESEADVVGQRLIAQAGFDPAQAVTFWQNMMSASGNRQPQWLSTHPAPANRIRELQADVNQLEPVYQQALQDGREPRCG
SIO_010081: PD885_RS00035
subclass of: SO_0000673
so part of: PD885_RS00035
location: 9088..9894
location: region:9088-9894:1
so has part: feature:9088-9894:1:exon

WP_002805923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9088-9894:1:exon

PD885_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00040
old locus tag: PD885_00009
so part of: sequence
location: 10168..11364
location: region:10168-11364:1
so has part: feature:10168-11364:1:exon
subclass of: SO_0000010

61892490
type: Gene
SIO_000068: ncbigene

position:10168:1
position: 10168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11364:1
position: 11364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10168-11364:1:exon

PD885_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00040
old locus tag: PD885_00009
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010376399.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MKLLNRKQALLSLFIAASLGGAVVADAVAQSDHSSERASRKSKSSGKAADLYPQSTRAAPTIKPSSKLSSKLQKLIEIFNKGEDYPGVRTQADEILANSAANEADKALAAQLAAQAAYNLDDVAAAKKYLQQAIGLNALDNNGQFQSMLMLAQLQLQDNQHAEGLVMLDKYLDESKSQRPEDLILKGQALYQAERYKEAIPVLKQAIAASPEPKDTWNQLLMSSYAEAGQTGEAVAAAEALAVKSPGDKKAQLNLASMYMQADQMDKAAAVMDKLRAAGQLTEEKEYKQLYSIYANTEKKEKDVIAVINEGMQKGILKPDYQTYLALAQSYYYSEDVPKAIENWQKAAPLSKDGETYLNLAKVLHSEGRIPEARQAAQQAIAKGVKKPDDAKKIINLK
SIO_010081: PD885_RS00040
subclass of: SO_0000673
so part of: PD885_RS00040
location: 10168..11364
location: region:10168-11364:1
so has part: feature:10168-11364:1:exon

WP_002805925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10168-11364:1:exon

PD885_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00045
old locus tag: PD885_00010
so part of: sequence
location: 11632..12189
location: region:11632-12189:1
so has part: feature:11632-12189:1:exon
subclass of: SO_0000010

61892491
type: Gene
SIO_000068: ncbigene

position:11632:1
position: 11632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12189:1
position: 12189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11632-12189:1:exon

PD885_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00045
old locus tag: PD885_00010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505935.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy transducer TonB
translation: MMLLIPAVAPKAPAEKERTTTVTLVDAPPPPPPPPPPPPPEDKPPPPVRNLSPPKPSPVPPPPEAPVVDVPEPRPSDIVTPPSPPSQPQPPSDIGASVDISSKNMNPPKYPPAAFRAGIQGEVVLIVDVDASGNVTNVSVEKSSRNRDLDRAAMDAARKWKFNASTVNGQKSAGRVRVPVNFALN
SIO_010081: PD885_RS00045
subclass of: SO_0000673
so part of: PD885_RS00045
location: 11632..12189
location: region:11632-12189:1
so has part: feature:11632-12189:1:exon

WP_040762538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11632-12189:1:exon

PD885_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: exbB
locus tag: PD885_RS00050
old locus tag: PD885_00011
so part of: sequence
location: 12276..13037
location: region:12276-13037:1
so has part: feature:12276-13037:1:exon
subclass of: SO_0000010

61892492
type: Gene
SIO_000068: ncbigene

position:12276:1
position: 12276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13037:1
position: 13037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12276-13037:1:exon

PD885_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: exbB
locus tag: PD885_RS00050
old locus tag: PD885_00011
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002805928.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-system energizer ExbB
translation: MLQEFFIAAAAGGSNPSAALSQMGFEHLITEMTSNPGDFAVSWVVLITLIAMSASSWYWTVINIFRATRLKSAADRVTTAFWDAPNAQDAIRAMEAQSASEPFSKIALDAAQAAAHHQRAEGSTGGLGESLSRSEFVDRALRQAVTRESTKLQSGMTLLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAVAGPVGEALIMTAIGLFVAIPAVFAFNFFSKVNSSVIAKFDTFAHDLHDFFATGSRVR
SIO_010081: PD885_RS00050
subclass of: SO_0000673
so part of: PD885_RS00050
location: 12276..13037
location: region:12276-13037:1
so has part: feature:12276-13037:1:exon

WP_002805928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12276-13037:1:exon

PD885_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00055
old locus tag: PD885_00012
so part of: sequence
location: 13084..13506
location: region:13084-13506:1
so has part: feature:13084-13506:1:exon
subclass of: SO_0000010

61892493
type: Gene
SIO_000068: ncbigene

position:13084:1
position: 13084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13506:1
position: 13506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13084-13506:1:exon

PD885_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00055
old locus tag: PD885_00012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005912447.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biopolymer transporter ExbD
translation: MAFSSGNSGGPMADINVTPLVDVMLVLLIIFIITAPLMSHKVKVELPQANLIQKEDAEKRAAPITLAVKEDGSLYWNDEPISKEALESRLSTAAQQTPQPPLNLRGDRTTKMRTINEITKIAQGQGMLDVGFVATKEKGQ
SIO_010081: PD885_RS00055
subclass of: SO_0000673
so part of: PD885_RS00055
location: 13084..13506
location: region:13084-13506:1
so has part: feature:13084-13506:1:exon

WP_002805930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13084-13506:1:exon

PD885_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00060
old locus tag: PD885_00013
so part of: sequence
location: 13510..13920
location: region:13510-13920:1
so has part: feature:13510-13920:1:exon
subclass of: SO_0000010

61892494
type: Gene
SIO_000068: ncbigene

position:13510:1
position: 13510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13920:1
position: 13920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13510-13920:1:exon

PD885_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00060
old locus tag: PD885_00013
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035269.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biopolymer transporter ExbD
translation: MAFSTSGNRGPMADINVTPLVDVMLVLLIIFIVTAPIMTYPIAVDLPQRVLNPPPQTTEPPPPIELRIDASNQVFWNNSPTPVAQLQQKMEEVVQADPTNQPELRIDANEDAEYEVMAKVLAAAKNSQMKKIGFMQ
SIO_010081: PD885_RS00060
subclass of: SO_0000673
so part of: PD885_RS00060
location: 13510..13920
location: region:13510-13920:1
so has part: feature:13510-13920:1:exon

WP_002805932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13510-13920:1:exon

PD885_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00065
old locus tag: PD885_00014
so part of: sequence
location: complement(14405..15028)
location: region:14405-15028:-1
so has part: feature:14405-15028:-1:exon
subclass of: SO_0000010

61892495
type: Gene
SIO_000068: ncbigene

position:14405:-1
position: 14405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15028:-1
position: 15028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14405-15028:-1:exon

PD885_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00065
old locus tag: PD885_00014
inference: COORDINATES: protein motif:HMM:NF039851.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5765 domain-containing protein
translation: MEILQAFTYTVINSCSNPMNQVATLLGFLHIAIQPFFINAISLYFIPEAAKNKVKNYAYFACFICLILMILKIYPFEWASHVPKGTALCSDRLCSVSGNWHIAWELPVNDILSVTIFGFKVVWAPYIFAAFIVPLAYGSWRFTIFHLLLGPILARLTTNNPNEFPAVWCLLSIGFLLLVIKTPVRSWLFVKTVWWRRVSTSQEQGSV
SIO_010081: PD885_RS00065
subclass of: SO_0000673
so part of: PD885_RS00065
location: complement(14405..15028)
location: region:14405-15028:-1
so has part: feature:14405-15028:-1:exon

WP_002805934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14405-15028:-1:exon

PD885_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00070
old locus tag: PD885_00015
pseudo: true
so part of: sequence
location: 15978..17329
location: region:15978-17329:1
so has part: feature:15978-17329:1:exon
subclass of: SO_0000010

61892496
type: Gene
SIO_000068: ncbigene

position:15978:1
position: 15978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17329:1
position: 17329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15978-17329:1:exon

PD885_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00070
old locus tag: PD885_00015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035783.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: PD885_RS00070
subclass of: SO_0000673
so part of: PD885_RS00070
location: 15978..17329
location: region:15978-17329:1
so has part: feature:15978-17329:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15978-17329:1:exon

PD885_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00075
old locus tag: PD885_00017
so part of: sequence
location: complement(17449..18216)
location: region:17449-18216:-1
so has part: feature:17449-18216:-1:exon
subclass of: SO_0000010

61892497
type: Gene
SIO_000068: ncbigene

position:17449:-1
position: 17449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18216:-1
position: 18216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17449-18216:-1:exon

PD885_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00075
old locus tag: PD885_00017
EC number: 2.6.99.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016901833.1
GO function: GO:0033856 - pyridoxine 5'-phosphate synthase activity [Evidence IEA]
GO process: GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxine 5'-phosphate synthase
translation: MTTRLSVNVNKIAALRNSRGGHVPDVVHAARTCIAAGAHGITVHPRPDQRHIRADDVLALSVLTRAHSVEFNIEGNPFAPPRDGYPGLLELCRATRPEQVTLVPDEDGQLTSDHGFDFAQNTAPLGELIGAFKTLGSRVSLFVDAGNPDVARAAALGADRVELYTGPYAQAHASGKPDAAFRLFADAARGASDASLGINAGHDLSQTNLGDFLAAVPGVLEVSIGHALTSEALYQGLDATVRAYLQILRSASIKV
SIO_010081: PD885_RS00075
subclass of: SO_0000673
so part of: PD885_RS00075
location: complement(17449..18216)
location: region:17449-18216:-1
so has part: feature:17449-18216:-1:exon

WP_002802292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17449-18216:-1:exon

PD885_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00080
old locus tag: PD885_00018
so part of: sequence
location: complement(18228..18497)
location: region:18228-18497:-1
so has part: feature:18228-18497:-1:exon
subclass of: SO_0000010

61892498
type: Gene
SIO_000068: ncbigene

position:18228:-1
position: 18228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18497:-1
position: 18497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18228-18497:-1:exon

PD885_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00080
old locus tag: PD885_00018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505939.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHWLFLLMALGALVLAFSTPHVWLLVVSLLVALLLLLLWTRGWFASRMGDTQRDASSMIDPAELRHLRELAEARKSATVAPTHSGEPQA
SIO_010081: PD885_RS00080
subclass of: SO_0000673
so part of: PD885_RS00080
location: complement(18228..18497)
location: region:18228-18497:-1
so has part: feature:18228-18497:-1:exon

WP_002802288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18228-18497:-1:exon

PD885_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: cls
locus tag: PD885_RS00085
old locus tag: PD885_00019
so part of: sequence
location: complement(18572..20032)
location: region:18572-20032:-1
so has part: feature:18572-20032:-1:exon
subclass of: SO_0000010

61892499
type: Gene
SIO_000068: ncbigene

position:18572:-1
position: 18572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20032:-1
position: 20032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18572-20032:-1:exon

PD885_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: cls
locus tag: PD885_RS00085
old locus tag: PD885_00019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019301611.1
GO function: GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO process: GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cardiolipin synthase
translation: MLARIQSAWDWLATIPHLEALLLAAYVLYLLWIVGWIVLQKREPVATLSWVLSLAALPYLGLLIYYWLGPQKVKRQRLRRGRSRSGMESYSSVCPPDANCTELAKVAQSTTGLAPSSATEVHWLVDGATTYAAIIEAIRSARDHIHLEYYIFQPDRSGTAICDALMERARAGVKVRLLMDAVGSSAMTRRALRMLGEAGVETAWFHPSQLLKPFKRPWLNLRTHRKVIVIDGRIAFTGGINVTDDENEHVRADAYRDLHVRLQGHVVHSLQLVFLEDWLYATRQSRDAFHGQKLWPEDVPTRAQGTVDAQVLVSGPDSSWEAIHRLMVAAIHEAKHRIWLVTPYFVPGEAARMALTSAALGGLDVRLLVPRVSDSRLVTYAARSYFDELLEAGVRIYEYGPRMLHTKALLADDEVCIVGSANFDSRSFRLNFELSMLFRNQAVAAELAGLIGTDLQRAQEVRFARHRPLWRSRLPEAFARLLSPLL
SIO_010081: PD885_RS00085
subclass of: SO_0000673
so part of: PD885_RS00085
location: complement(18572..20032)
location: region:18572-20032:-1
so has part: feature:18572-20032:-1:exon

WP_002802287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18572-20032:-1:exon

PD885_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00090
pseudo: true
so part of: sequence
location: 20169..21262
location: region:20169-21262:1
so has part: feature:20169-21262:1:exon
subclass of: SO_0000010

61892500
type: Gene
SIO_000068: ncbigene

position:20169:1
position: 20169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21262:1
position: 21262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20169-21262:1:exon

PD885_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017117235.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: PA0069 family radical SAM protein
SIO_010081: PD885_RS00090
subclass of: SO_0000673
so part of: PD885_RS00090
location: 20169..21262
location: region:20169-21262:1
so has part: feature:20169-21262:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20169-21262:1:exon

PD885_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00095
old locus tag: PD885_00022
pseudo: true
so part of: sequence
location: complement(21355..22684)
location: region:21355-22684:-1
so has part: feature:21355-22684:-1:exon
subclass of: SO_0000010

61892501
type: Gene
SIO_000068: ncbigene

position:21355:-1
position: 21355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22684:-1
position: 22684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21355-22684:-1:exon

PD885_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00095
old locus tag: PD885_00022
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035783.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: PD885_RS00095
subclass of: SO_0000673
so part of: PD885_RS00095
location: complement(21355..22684)
location: region:21355-22684:-1
so has part: feature:21355-22684:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21355-22684:-1:exon

PD885_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00100
old locus tag: PD885_00025
pseudo: true
so part of: sequence
location: complement(23182..24530)
location: region:23182-24530:-1
so has part: feature:23182-24530:-1:exon
subclass of: SO_0000010

61892502
type: Gene
SIO_000068: ncbigene

position:23182:-1
position: 23182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24530:-1
position: 24530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23182-24530:-1:exon

PD885_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00100
old locus tag: PD885_00025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007968187.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: outer membrane protein transport protein
SIO_010081: PD885_RS00100
subclass of: SO_0000673
so part of: PD885_RS00100
location: complement(23182..24530)
location: region:23182-24530:-1
so has part: feature:23182-24530:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23182-24530:-1:exon

PD885_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00105
old locus tag: PD885_00026
so part of: sequence
location: 24749..25441
location: region:24749-25441:1
so has part: feature:24749-25441:1:exon
subclass of: SO_0000010

61892503
type: Gene
SIO_000068: ncbigene

position:24749:1
position: 24749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25441:1
position: 25441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24749-25441:1:exon

PD885_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00105
old locus tag: PD885_00026
EC number: 3.4.21.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019301614.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhomboid family intramembrane serine protease
translation: MFVSIPSRKKSAPRWAVPLLFATVWLAYVWSISRPGEARSTLWLDWGALSSGVSNLGDWWATLRDGSVLRLFTALFLHADWSHLLGNLVFLLIFGLPAERILGPWRLLLLFLVGGAASNLAAIFAIGTPDRVIIGASGAVSALIGTYLALFPGAKLGVVLPLGVFLEFIRVPAPLLIGVWALLQVVFAYIGPAFGMVAWSAHIAGFVFGIVYGLYVRAAIARRLRKRHGF
SIO_010081: PD885_RS00105
subclass of: SO_0000673
so part of: PD885_RS00105
location: 24749..25441
location: region:24749-25441:1
so has part: feature:24749-25441:1:exon

WP_002803684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24749-25441:1:exon

PD885_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00110
old locus tag: PD885_00027
so part of: sequence
location: 25546..25866
location: region:25546-25866:1
so has part: feature:25546-25866:1:exon
subclass of: SO_0000010

61892504
type: Gene
SIO_000068: ncbigene

position:25546:1
position: 25546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25866:1
position: 25866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25546-25866:1:exon

PD885_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00110
old locus tag: PD885_00027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014088873.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1820 family protein
translation: MSKPLYKVTFLNHGKVYELYARQVTGSHLWGFNQIGELVFDVHDGVVVDPTEERLREEFGNTKTLHLPMQSIVRIEEVEKKGQSVIRDATTGDKVVTPFPSPTKPR
SIO_010081: PD885_RS00110
subclass of: SO_0000673
so part of: PD885_RS00110
location: 25546..25866
location: region:25546-25866:1
so has part: feature:25546-25866:1:exon

WP_002803682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25546-25866:1:exon

PD885_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00115
old locus tag: PD885_00028
so part of: sequence
location: 25866..26852
location: region:25866-26852:1
so has part: feature:25866-26852:1:exon
subclass of: SO_0000010

61892505
type: Gene
SIO_000068: ncbigene

position:26852:1
position: 26852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25866-26852:1:exon

PD885_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00115
old locus tag: PD885_00028
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505945.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-2-hydroxyacid dehydrogenase family protein
translation: MRILVPDDYQGAVRQLPCLQRLQGHDVQVLGALATDPNEWAERLVEADALVLIRERTRVDATLLRRLPRLKLISQTGRVGAHVDVAACTEFGVAVAEGVGSSVAPAELTWALILSASRRLSEYQRALHQGRWQALGDPGVGRVLHERTLGIWSYGRIGQRVANFGCAFGMQVLVWGGEDSCAKAARDGFEIAESREDLFERSDVLSLHRRLTAQTRHDVSAQDLARMRGDALLVNTSRAELIAPGALLAALDAGRPAQAAVDVFEREPVLDPRDPLLQHPRVLATPHLGYVERDSYALYFEAAFDNVLAFAAGTPRNLVNPEALVTAR
SIO_010081: PD885_RS00115
subclass of: SO_0000673
so part of: PD885_RS00115
location: 25866..26852
location: region:25866-26852:1
so has part: feature:25866-26852:1:exon

WP_002803681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25866-26852:1:exon

PD885_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00120
old locus tag: PD885_00029
so part of: sequence
location: complement(27205..28668)
location: region:27205-28668:-1
so has part: feature:27205-28668:-1:exon
subclass of: SO_0000010

61892506
type: Gene
SIO_000068: ncbigene

position:27205:-1
position: 27205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28668:-1
position: 28668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27205-28668:-1:exon

PD885_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00120
old locus tag: PD885_00029
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345785.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S41 family peptidase
translation: MRVAVLSVALLLALFASPGWTQTARPAAAQATADDPEANEAAISKVPLNEIRRFVAVYNAVKQAYVDPVEDKKLMHAAVRGLLSDLDPHSTYFDKEDAKAFDEQATGAYDGIGVELLQQQDNTLKVIAPIDDTPAARAGIRAGDVIVAIDGKPIDASKAMEPLRGESGSKVVLTIVRDKAPKPFDVTLQRETIRVASVRSKLLEPGYGYIRISTFQADTGANFQKNLKQLQAGGKLRGLVLDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDASPGDLLGGAPVVVLVDAGSASASEVLAGALRDNQRARVIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQASGILPEVLLTPEPQPGDADVPASLTDYSEATLPGHLRGDEEGEEGYRTGDVLPGDGPIATALAELKQPGSAAKAQAALKAKAQAAQKARATKTAAEPKPAAARPATADKPKAAELVEKAKPAEPVK
SIO_010081: PD885_RS00120
subclass of: SO_0000673
so part of: PD885_RS00120
location: complement(27205..28668)
location: region:27205-28668:-1
so has part: feature:27205-28668:-1:exon

WP_002803679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27205-28668:-1:exon

PD885_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00125
old locus tag: PD885_00030
so part of: sequence
location: complement(28773..30071)
location: region:28773-30071:-1
so has part: feature:28773-30071:-1:exon
subclass of: SO_0000010

61892507
type: Gene
SIO_000068: ncbigene

position:28773:-1
position: 28773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30071:-1
position: 30071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28773-30071:-1:exon

PD885_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00125
old locus tag: PD885_00030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016850464.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidoglycan DD-metalloendopeptidase family protein
translation: MPPSPAQLPRLPFAPATGRGRVWLAATVLACALLASAGADAQSQRETERKLQQLRDELKTISADRRELEGKRSTAAQQLRQADEKVAKTARALSETETAMYEQEQHLSNLQQDRAQLQRGLQRQRVQLAGLLRGADQVGRNAPLKVLLSQDTVGDATRMLADHRYVQNARAQRIQALTTQLDALAKVEQDIASRRQALDAARARQKAQASSLQKDRSQQAATVAQLDDRYKQHAEREKALGQDAQSLEQLLANLRAAAAKAEAERRAAAKRAAAEAAAQAKRSKSDRPDRPGKTPPKVIASAPAPKVGGLSWPVSGNLLARFDATLPDGHTSKGVLIGAPKGSTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHNDTLLRDAGASIKRGEAVAKVGSSGGQGVPALYFELRRNGQPVDPSSWLQRR
SIO_010081: PD885_RS00125
subclass of: SO_0000673
so part of: PD885_RS00125
location: complement(28773..30071)
location: region:28773-30071:-1
so has part: feature:28773-30071:-1:exon

WP_172402137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28773-30071:-1:exon

PD885_RS21225
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21225
old locus tag: PD885_00031
so part of: sequence
location: 30169..30330
location: region:30169-30330:1
so has part: feature:30169-30330:1:exon
subclass of: SO_0000010

61896431
type: Gene
SIO_000068: ncbigene

position:30169:1
position: 30169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30330:1
position: 30330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30169-30330:1:exon

PD885_RS21225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21225
old locus tag: PD885_00031
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKPQHLLLVLSAVCTSACADEDISEVDGRISAKIAVVRGATPRSFNSDVAPKE
SIO_010081: PD885_RS21225
subclass of: SO_0000673
so part of: PD885_RS21225
location: 30169..30330
location: region:30169-30330:1
so has part: feature:30169-30330:1:exon

WP_002803677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30169-30330:1:exon

PD885_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00135
old locus tag: PD885_00032
so part of: sequence
location: 30440..32260
location: region:30440-32260:1
so has part: feature:30440-32260:1:exon
subclass of: SO_0000010

61892508
type: Gene
SIO_000068: ncbigene

position:30440:1
position: 30440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32260:1
position: 32260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30440-32260:1:exon

PD885_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00135
old locus tag: PD885_00032
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017155959.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M28 family metallopeptidase
translation: MPRKILLCLAAILALAGCKREPADAPTAPTAQAPVDRAPSAPVSRHAFSPELTSGDFAELVKTLASDDFEGRGPGTPGEEMTVTYIRDQMQRIGLQPGNGDSWFQEVPMVETTAAPSTAPSLRSGDRTRTLAFGSDILVGTRTGQPEVKLDNSELVFVGYGVDAPEQQWNDYAGQDWKGKTVVMFVNDPGFQTGDAKLFDGKRMSYYGRWTYKFEEAARKGAAAALIVHDTPGASYGWDVVKNSWSGPQYDLPAKDDPDARLPVQGWISAETAKQLFANAGLDLAQAYSDASKRGFKPVPLKASWSVDLKSTIAEKISRNVVGVLPGSTHADEAVLYVAHWDHLGKHPGESGDNIYNGAVDNATGVAGILEIADGFAHQDPKPARSVVFVAVTLEESGLLGSKYYVANPSFPLDKIAAVINLDAMSVAGRARDVTVVGMGSSELEDILKPIAAMQGRTLHAEATPESGSYFRSDHFNFAKAGVPALYADGGEDLREGGTRAGRAAAKDYGRNRYHAPGDEYDAASWKLDGTIEDLQAVYGVGKEVAAGERWPNWYAGNPFKAARDRMMAGRPGILAAADAQTPQAEDSGNQDGKNDASTKKAAPAR
SIO_010081: PD885_RS00135
subclass of: SO_0000673
so part of: PD885_RS00135
location: 30440..32260
location: region:30440-32260:1
so has part: feature:30440-32260:1:exon

WP_002803675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30440-32260:1:exon

PD885_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00140
old locus tag: PD885_00033
so part of: sequence
location: complement(32578..33024)
location: region:32578-33024:-1
so has part: feature:32578-33024:-1:exon
subclass of: SO_0000010

61892509
type: Gene
SIO_000068: ncbigene

position:32578:-1
position: 32578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33024:-1
position: 33024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32578-33024:-1:exon

PD885_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00140
old locus tag: PD885_00033
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017166071.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PepSY domain-containing protein
translation: MTQRLLKTALIGALALASHGAFAQAAADKPAKALTSAEVASMLTAKGYTKVHDVKFKHGVWTADARSGDGKNVDVRIDPVTGRVYGDHTTSKLNEADIRAALSTNGYLNVHDLAFENGLWKAEAKRGGQKVDLQLDPEDGHVVSVDNN
SIO_010081: PD885_RS00140
subclass of: SO_0000673
so part of: PD885_RS00140
location: complement(32578..33024)
location: region:32578-33024:-1
so has part: feature:32578-33024:-1:exon

WP_002803672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32578-33024:-1:exon

PD885_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00145
old locus tag: PD885_00034
pseudo: true
so part of: sequence
location: complement(33223..>33380)
location: region:33223-33380:-1
so has part: feature:33223-33380:-1:exon
subclass of: SO_0000010

61892510
type: Gene
SIO_000068: ncbigene

position:33223:-1
position: 33223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33380:-1
position: 33380
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33223-33380:-1:exon

PD885_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00145
old locus tag: PD885_00034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014508081.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: PD885_RS00145
subclass of: SO_0000673
so part of: PD885_RS00145
location: complement(33223..>33380)
location: region:33223-33380:-1
so has part: feature:33223-33380:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33223-33380:-1:exon

PD885_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00150
pseudo: true
so part of: sequence
location: 33373..>33632
location: region:33373-33632:1
so has part: feature:33373-33632:1:exon
subclass of: SO_0000010

61892511
type: Gene
SIO_000068: ncbigene

position:33373:1
position: 33373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33632:1
position: 33632
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33373-33632:1:exon

PD885_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: PD885_RS00150
subclass of: SO_0000673
so part of: PD885_RS00150
location: 33373..>33632
location: region:33373-33632:1
so has part: feature:33373-33632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33373-33632:1:exon

PD885_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00155
old locus tag: PD885_00035
so part of: sequence
location: complement(34063..35448)
location: region:34063-35448:-1
so has part: feature:34063-35448:-1:exon
subclass of: SO_0000010

61892512
type: Gene
SIO_000068: ncbigene

position:34063:-1
position: 34063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35448:-1
position: 35448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34063-35448:-1:exon

PD885_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00155
old locus tag: PD885_00035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016903093.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-linked oxidase C-terminal domain-containing protein
translation: MTDVLPAALAELLAARLGPDGWLTGADARRRYGEDDSRRWALPAAVALPRDTDDVVAIVQACRTHGVPIVARGAGTGTTGAAVPFSGGVVVSMARMNRILALRPEDRCAIVQPGLLNGELQQALQPHALFWPPDPSSAEICSIGGNLSTNAGGPRAVKYGATRDNVLGLVAVTGTGEVIRCGGAYTKNSTGYDLTHLLVGSEGTLAIIVEATLKLTPRAIAHAGLRALYRDASSAAAAVSRLMAQPTTPTMLEFMDASAIALLRRKGSDVPEAGAMLLIEADGDHDTLPYALQALHDAADGEGVLSLDVAADGSARDRLWAARRALSPALRTIKPGKVNEDVVVPVSRIPALVAGVEALAAEFALPIVAFGHAGNGNLHINIMYDPADADEDARAHAALPRLFALVLSLEGTLSGEHGIGVAKRDFMTQAFSAPTLAAMRAIKAALDPDGILNPGKVLPPL
SIO_010081: PD885_RS00155
subclass of: SO_0000673
so part of: PD885_RS00155
location: complement(34063..35448)
location: region:34063-35448:-1
so has part: feature:34063-35448:-1:exon

WP_002803666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34063-35448:-1:exon

PD885_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00160
pseudo: true
so part of: sequence
location: complement(35445..>35553)
location: region:35445-35553:-1
so has part: feature:35445-35553:-1:exon
subclass of: SO_0000010

61892513
type: Gene
SIO_000068: ncbigene

position:35445:-1
position: 35445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35553:-1
position: 35553
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35445-35553:-1:exon

PD885_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017167832.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: metal-dependent hydrolase
SIO_010081: PD885_RS00160
subclass of: SO_0000673
so part of: PD885_RS00160
location: complement(35445..>35553)
location: region:35445-35553:-1
so has part: feature:35445-35553:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35445-35553:-1:exon

PD885_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00165
so part of: sequence
location: complement(35703..35778)
location: region:35703-35778:-1
so has part: feature:35703-35778:-1:exon
subclass of: SO_0000011

61892514
type: Gene
SIO_000068: ncbigene

position:35703:-1
position: 35703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35778:-1
position: 35778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35703-35778:-1:exon

PD885_RS00165
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 48664
nc RNA class: other
locus tag: PD885_RS00165
product: sX9 sRNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02228
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: PD885_RS00165
subclass of: SO_0000673
so part of: PD885_RS00165
location: complement(35703..35778)
location: region:35703-35778:-1
so has part: feature:35703-35778:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35703-35778:-1:exon

PD885_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00175
old locus tag: PD885_00036
pseudo: true
so part of: sequence
location: <36299..36631
location: region:36299-36631:1
so has part: feature:36299-36631:1:exon
subclass of: SO_0000010

61892515
type: Gene
SIO_000068: ncbigene

position:36299:1
position: 36299
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:36631:1
position: 36631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36299-36631:1:exon

PD885_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00175
old locus tag: PD885_00036
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: PD885_RS00175
subclass of: SO_0000673
so part of: PD885_RS00175
location: <36299..36631
location: region:36299-36631:1
so has part: feature:36299-36631:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36299-36631:1:exon

PD885_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00180
old locus tag: PD885_00037
so part of: sequence
location: complement(36698..37474)
location: region:36698-37474:-1
so has part: feature:36698-37474:-1:exon
subclass of: SO_0000010

61892516
type: Gene
SIO_000068: ncbigene

position:36698:-1
position: 36698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37474:-1
position: 37474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36698-37474:-1:exon

PD885_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00180
old locus tag: PD885_00037
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016903673.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MTTHRWRLDGQTALITGASVGIGLAIARELLGFGADLLMVARDADALAQARDELAEEFPERELHGLAADVSDDEERRAILDWVEDHTDGLHLLINNAGGNIARAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLAKHAASVIVNVGSVSGITHVRSGAPYGMTKAALQQMTRNLAVEWAEDGIRVNAVAPWYIRTRRTSGPLSDPDYYEQVIERTPMRRIGEPEEVAAAVSFLCLPAASYITGECIAVDGGFLRYGF
SIO_010081: PD885_RS00180
subclass of: SO_0000673
so part of: PD885_RS00180
location: complement(36698..37474)
location: region:36698-37474:-1
so has part: feature:36698-37474:-1:exon

WP_002803662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36698-37474:-1:exon

PD885_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00185
old locus tag: PD885_00038
so part of: sequence
location: 37579..37794
location: region:37579-37794:1
so has part: feature:37579-37794:1:exon
subclass of: SO_0000010

61892517
type: Gene
SIO_000068: ncbigene

position:37579:1
position: 37579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37794:1
position: 37794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37579-37794:1:exon

PD885_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00185
old locus tag: PD885_00038
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157045.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLHWILAASLTLLIGGCQQPQPVPTEQKPEPQATALRDHIHEPLNRAHAVQAVTDQSADDQRKAIDAATQ
SIO_010081: PD885_RS00185
subclass of: SO_0000673
so part of: PD885_RS00185
location: 37579..37794
location: region:37579-37794:1
so has part: feature:37579-37794:1:exon

WP_002803660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37579-37794:1:exon

PD885_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: sppA
locus tag: PD885_RS00190
old locus tag: PD885_00039
so part of: sequence
location: complement(37994..39895)
location: region:37994-39895:-1
so has part: feature:37994-39895:-1:exon
subclass of: SO_0000010

61892518
type: Gene
SIO_000068: ncbigene

position:37994:-1
position: 37994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39895:-1
position: 39895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37994-39895:-1:exon

PD885_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: sppA
locus tag: PD885_RS00190
old locus tag: PD885_00039
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019300058.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008233 - peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptide peptidase SppA
translation: MNHPVRRTPIASFFVGLWDVMNFTRRLIFNLVFFGFLFLMLLLFVVAIARGDGTKPLAERTTLVINPEGTLVEQFSADPVSRSLAKAVGNKGAEEVQLRDLVRVIEAAGKDRKIERVLLNLDKLQPPGFASQREVAAALQKLRASGKQMVAFSESMSQGQYLLAAQANEVYLDPMGSVLLEGLGRYRQYFREGLQDKLGVDVHLFRVGEYKSAAEPYILDAASADAKEADLFWMNDVWQRYLADVGTARKLSPAQLTAGIDTLPEGVAAAGGDLAKFALQQKLVDGLKTREEVDALLTKRGVADSDADSGFRNIDFSSYLTQLQAQGSPMDSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDDEVKAVVLRVDSPGGEVFASEQIRRQVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLTRALNKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVEAIDKVARGRVWSGAQARQHGLVDAFGGMQEAVADAANRAKLSKGKFRVSYVEKPATPFSQFMSGFAGSRMGAWMLGNSGMARAMLARSLPEVDTQLRFVEDAVHDSKAGGTPVKALAYCFCGF
SIO_010081: PD885_RS00190
subclass of: SO_0000673
so part of: PD885_RS00190
location: complement(37994..39895)
location: region:37994-39895:-1
so has part: feature:37994-39895:-1:exon

WP_002803659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37994-39895:-1:exon

PD885_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00195
old locus tag: PD885_00040
so part of: sequence
location: complement(39980..41356)
location: region:39980-41356:-1
so has part: feature:39980-41356:-1:exon
subclass of: SO_0000010

61892519
type: Gene
SIO_000068: ncbigene

position:39980:-1
position: 39980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41356:-1
position: 41356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39980-41356:-1:exon

PD885_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00195
old locus tag: PD885_00040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014091226.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MATE family efflux transporter
translation: MSVSSAPSAATPSVASEVRTTGLLALPLVIGHVSSGLIGFVDNVIAGHHGTATLAAVTIGTSLLWLPMLVPIGTLISLTASVSQLVGAGREREIGPLFRQALWLSLALGAVMFTFLGAVPPLLPTFGIAPDIVPGATDFLHAVRWGGPAMTFYFCMRYLCEGMHWTLPTMVLGVAGLLVLAPLGYALTYGTFGFAEHGAQGLGMASAITMWVQASVFALYLWRSRRFAHLELFNHLEGPRWRAIDDLLRTGLPIGITVLMEGGLFIVTALLIGRLGSAEAAAHQIAINVAQLCFMIPMGVAEATTVRVGHAVGRGDPLGMRRAAWAGYAIVLGTQALSASVLLLGHDAIVSVYTNDVTVAALASVLLLFAATFQFPDGIQVLSSGALRGLKDTRVPMFLAMFSYWGVGMPIGAGLGLGLGWGPQGMWIGLILGLTVASILMGLRFRQTSQRLTATATP
SIO_010081: PD885_RS00195
subclass of: SO_0000673
so part of: PD885_RS00195
location: complement(39980..41356)
location: region:39980-41356:-1
so has part: feature:39980-41356:-1:exon

WP_002803657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39980-41356:-1:exon

PD885_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00200
old locus tag: PD885_00041
so part of: sequence
location: complement(41784..42374)
location: region:41784-42374:-1
so has part: feature:41784-42374:-1:exon
subclass of: SO_0000010

61892520
type: Gene
SIO_000068: ncbigene

position:41784:-1
position: 41784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42374:-1
position: 42374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41784-42374:-1:exon

PD885_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00200
old locus tag: PD885_00041
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012443959.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3106 domain-containing protein
translation: MTKLINWCGLLLFALAGSAAAQTLPTPLEEGGAVASSHVPTPATPSAAQQHARWDALTPAQQAELRARYAAWNGLTATDRVVLRQARERLHALPEDQQRALRTQFTAMDRLHRDGWRLGSQLGAFYPQLQPLIGYVPAAQRDSVLAVLRSLDAGQLEQLAVLAQRTPPQDRDALRDAFLAEAPATRSIWLKRQLAR
SIO_010081: PD885_RS00200
subclass of: SO_0000673
so part of: PD885_RS00200
location: complement(41784..42374)
location: region:41784-42374:-1
so has part: feature:41784-42374:-1:exon

WP_002803656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41784-42374:-1:exon

PD885_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00205
old locus tag: PD885_00042
so part of: sequence
location: complement(42358..43392)
location: region:42358-43392:-1
so has part: feature:42358-43392:-1:exon
subclass of: SO_0000010

61892521
type: Gene
SIO_000068: ncbigene

position:42358:-1
position: 42358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43392:-1
position: 43392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42358-43392:-1:exon

PD885_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00205
old locus tag: PD885_00042
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157040.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVVPDAPVTPAALSAFLRGVERRGLVLARLQCGDGAAAEQALAAALRAFNSQAAGRPMAFWPMRFWSLLATAPPLRREPMPGTWLPPFTALGRMQTADRLALLLRIVAGLEENAASEVHGIDVAVYRQSLARACPRDAAGNPDAHAWRVLAEAVQLELRDLTPVQLTRLRQLRDSALAGLPLQPAAVVVAPTEPRQPAAPRVRAARREHWSRVNRRHAGNVLGVLALTLLLAAIGWWWIHRRPALPPEPVSQAPAGVLHVTDAAPVLVEELPAADRPDALAAPGMDSRDQAMLADPDLELARAADFYAWYAAGHPVPADESGAHATAAEQPSAALETVDDETN
SIO_010081: PD885_RS00205
subclass of: SO_0000673
so part of: PD885_RS00205
location: complement(42358..43392)
location: region:42358-43392:-1
so has part: feature:42358-43392:-1:exon

WP_002803655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42358-43392:-1:exon

PD885_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00210
old locus tag: PD885_00043
so part of: sequence
location: 43862..46084
location: region:43862-46084:1
so has part: feature:43862-46084:1:exon
subclass of: SO_0000010

61892522
type: Gene
SIO_000068: ncbigene

position:43862:1
position: 43862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46084:1
position: 46084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43862-46084:1:exon

PD885_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00210
old locus tag: PD885_00043
EC number: 3.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017167545.1
GO function: GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0032508 - DNA duplex unwinding [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: primosomal protein N'
translation: MTSTVATLRVALPVPLPQLFDYLPPADAPLANLARVGCRVRVPLGPRELVGVVVEIGQLASAEGLRPALAWCDAAPLLVDELARSLQWLARYTHAPLGEAQASALPGPLRRGEPLADTHAWAWQLTEAGRTGAASLRAGSRPALLAALLLTAAVGEDQLDPLLPQWREAARSLVKRGYAERVAVAADTIAPRPRSGPQLNDEQQAAADTIRARSGFATYLLDGVTGSGKTEVYLQAIADCLAAGRQALVLVPEIGLTPQTLGRFRARLGVPVHALHSGLSDGERARVWAAAWRGEAKLIVGTRSAVFTPLPNAGLIVIDEEHDGSYKQQDGIRYHARDFALVRGKALDVPVILGSATPSLESLHNAYSGRFQHLRLSRRAGEARPPRVRVLDVRKRPLKDGLSPEVLAGIGATLARGEQVLVFKNRRGYAPVLLCHDCGWTAACQRCSTPLHQTPMTVHAGGRRLQCHHCGARQSAPLACPACASLALQPQGIGTERLEERLTEQFPDFPVVRIDRSTTRRRDALETQLARLGTEAGILVGTQILAKGHDLPRLTMVVVVGIDEGLFSADFRAAEKLSQQLIQVAGRAGRADRPGEVWLQTHHPEHPLLQTLVNGGYHAFADAELQQREAAGFPPSAHLALFRAEAKDVAAANQFLMAVRVLTNADTSAESPASAAVECYGPMPAPMPRRAGFQRTQLLLSAQQRSALHRLLDAQLPAIYALPQARRVRWSLDVDPIDLY
SIO_010081: PD885_RS00210
subclass of: SO_0000673
so part of: PD885_RS00210
location: 43862..46084
location: region:43862-46084:1
so has part: feature:43862-46084:1:exon

WP_002803653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43862-46084:1:exon

PD885_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00215
pseudo: true
so part of: sequence
location: 46103..>46527
location: region:46103-46527:1
so has part: feature:46103-46527:1:exon
subclass of: SO_0000010

61892523
type: Gene
SIO_000068: ncbigene

position:46103:1
position: 46103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46527:1
position: 46527
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46103-46527:1:exon

PD885_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017165282.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
SIO_010081: PD885_RS00215
subclass of: SO_0000673
so part of: PD885_RS00215
location: 46103..>46527
location: region:46103-46527:1
so has part: feature:46103-46527:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46103-46527:1:exon

PD885_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00220
pseudo: true
so part of: sequence
location: <46579..46712
location: region:46579-46712:1
so has part: feature:46579-46712:1:exon
subclass of: SO_0000010

61892524
type: Gene
SIO_000068: ncbigene

position:46579:1
position: 46579
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:46712:1
position: 46712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46579-46712:1:exon

PD885_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011348802.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: trimeric intracellular cation channel family protein
SIO_010081: PD885_RS00220
subclass of: SO_0000673
so part of: PD885_RS00220
location: <46579..46712
location: region:46579-46712:1
so has part: feature:46579-46712:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46579-46712:1:exon

PD885_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: rpoH
locus tag: PD885_RS00225
old locus tag: PD885_00045
so part of: sequence
location: complement(46956..47831)
location: region:46956-47831:-1
so has part: feature:46956-47831:-1:exon
subclass of: SO_0000010

61892525
type: Gene
SIO_000068: ncbigene

position:46956:-1
position: 46956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47831:-1
position: 47831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46956-47831:-1:exon

PD885_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: rpoH
locus tag: PD885_RS00225
old locus tag: PD885_00045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002803651.1
GO function: GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoH
translation: MNQTTSTALVANNLPIPSALGSLDAYIGAVHQIPVLSVDEEQNLARRFRDELDLDAARELVHSHLRFVVHVARGYNGYGLPLGDLIQEGNIGLMKAVKRFDPEMGVRLVSFAVHWIRAEMHEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWLNASEVTAVAKDLNVSEREVMEMESRLSGRDIGFDASSDEDDDHGPPSPVSYLVANDEDPSQAYERHDSEDNQLQLLREGMAGLDTRSRDIVKRRWLDSDSKVTLQELADEYGVSAERIRQIEANALKKMKALFVA
SIO_010081: PD885_RS00225
subclass of: SO_0000673
so part of: PD885_RS00225
location: complement(46956..47831)
location: region:46956-47831:-1
so has part: feature:46956-47831:-1:exon

WP_002803651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46956-47831:-1:exon

PD885_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: ung
locus tag: PD885_RS00230
old locus tag: PD885_00046
so part of: sequence
location: complement(48028..48753)
location: region:48028-48753:-1
so has part: feature:48028-48753:-1:exon
subclass of: SO_0000010

61892526
type: Gene
SIO_000068: ncbigene

position:48028:-1
position: 48028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48753:-1
position: 48753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48028-48753:-1:exon

PD885_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: ung
locus tag: PD885_RS00230
old locus tag: PD885_00046
EC number: 3.2.2.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014506372.1
GO function: GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO process: GO:0006284 - base-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-DNA glycosylase
translation: MTEAEGRIQLEPSWKARVGDWLLRPEMQELSGFLRQRKAAGARVFPPGPQIFAAFDATPFEQVKVVILGQDPYHGEGQAHGLCFSVLPGVPVPPSLLNIYKEIQDDLGIARPDHGYLMPWARQGVLLLNAVLTVERGRAGAHQNKGWEGFTDHVVETLNREREGVVFLLWGSYAQSKGKVIDQARHRVLKAPHPSPLSAHRGFLGCQHFSKTNEHLQRRGVSPIDWSLPPRNALDTTSAGG
SIO_010081: PD885_RS00230
subclass of: SO_0000673
so part of: PD885_RS00230
location: complement(48028..48753)
location: region:48028-48753:-1
so has part: feature:48028-48753:-1:exon

WP_002803647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48028-48753:-1:exon

PD885_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00235
old locus tag: PD885_00047
so part of: sequence
location: complement(48750..49592)
location: region:48750-49592:-1
so has part: feature:48750-49592:-1:exon
subclass of: SO_0000010

61892527
type: Gene
SIO_000068: ncbigene

position:48750:-1
position: 48750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49592:-1
position: 49592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48750-49592:-1:exon

PD885_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00235
old locus tag: PD885_00047
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016903686.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MHPSDLKHLISAAPRVMVVDGSKLVRKLIADVLKRDLPNVQVIGCSSIAEARQALEAGAVDLVTTSLSLPDGDGLTLARSVREAASQAYVPVIVVSGDAQQHLMERRFTEYVTDYFDKALGHEALATFIRGYVQPEPVVGATVLYIEDSRVVAEATKRMLERQRLKVVHVLTAEDAFALLTAESLGRTERRIDVVLTDVTLKGELNGRDVVERIRIDFAYGKRRLPVLVMTGDTNPRNQSELLRAGANDLVQKPIEERLLVTKVLFQLRLARLEDQAVTL
SIO_010081: PD885_RS00235
subclass of: SO_0000673
so part of: PD885_RS00235
location: complement(48750..49592)
location: region:48750-49592:-1
so has part: feature:48750-49592:-1:exon

WP_002803646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48750-49592:-1:exon

PD885_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: ftsX
locus tag: PD885_RS00240
old locus tag: PD885_00048
so part of: sequence
location: complement(49601..50551)
location: region:49601-50551:-1
so has part: feature:49601-50551:-1:exon
subclass of: SO_0000010

61892528
type: Gene
SIO_000068: ncbigene

position:49601:-1
position: 49601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50551:-1
position: 50551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49601-50551:-1:exon

PD885_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: ftsX
locus tag: PD885_RS00240
old locus tag: PD885_00048
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003484495.1
GO process: GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: permease-like cell division protein FtsX
translation: MNKPANTEAVAPSRFGVWIDHHLHSIAFSLGRAMRKPWATLLTIVVMALALALPLGLSIALDNVKLLAGSVQQSREINLFLKVDVGADAAQALAVELRARPDVAQVTLRTPTQRLAELRESAKLDEAIDALGDNPLPTLLIVTPTDAADDAQLAGALQALPQTDQVQHDVLWRKRLDGWLRFGERLVQVLSALLGIGAVLVVGNTVRLDIQSRREEIGVLQLLGASDGFIRRPFLYLGAWYGLGAGAVALALIAASGLALRAPLAILADSYGSSFTLHGLDLLHSAMVLVGTLVLGWLGAWLVTGHFLRQTRPTET
SIO_010081: PD885_RS00240
subclass of: SO_0000673
so part of: PD885_RS00240
location: complement(49601..50551)
location: region:49601-50551:-1
so has part: feature:49601-50551:-1:exon

WP_002803644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49601-50551:-1:exon

PD885_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: ftsE
locus tag: PD885_RS00245
old locus tag: PD885_00049
so part of: sequence
location: complement(50548..51234)
location: region:50548-51234:-1
so has part: feature:50548-51234:-1:exon
subclass of: SO_0000010

61892529
type: Gene
SIO_000068: ncbigene

position:50548:-1
position: 50548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51234:-1
position: 51234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50548-51234:-1:exon

PD885_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: ftsE
locus tag: PD885_RS00245
old locus tag: PD885_00049
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003484499.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0000910 - cytokinesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division ATP-binding protein FtsE
translation: MTVLRFDNVSKHYAGGHQALTDVSFEVADGEMLFVTGHSGAGKSTLLKLIHLSERPSQGAVLLGERNLLKVRGRQISLHRRQVGAVYQDHRLLNDRSIAENVALPLILRGTRRAEIGKRVRSALERIGLAHREKALPSQLSAGEQQRVGIARAIVGEPRLLVADEPTGNLDPALAAEIMQLFAELPARGTSVLVVSHDLALLKQMRKRVLILDHGRLVDDISPQDLAE
SIO_010081: PD885_RS00245
subclass of: SO_0000673
so part of: PD885_RS00245
location: complement(50548..51234)
location: region:50548-51234:-1
so has part: feature:50548-51234:-1:exon

WP_002803642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50548-51234:-1:exon

PD885_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: rhlB
locus tag: PD885_RS00250
old locus tag: PD885_00050
so part of: sequence
location: complement(51310..53022)
location: region:51310-53022:-1
so has part: feature:51310-53022:-1:exon
subclass of: SO_0000010

61892530
type: Gene
SIO_000068: ncbigene

position:51310:-1
position: 51310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53022:-1
position: 53022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51310-53022:-1:exon

PD885_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: rhlB
locus tag: PD885_RS00250
old locus tag: PD885_00050
EC number: 3.6.4.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157031.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent RNA helicase RhlB
translation: MSDKPLTDLTFSTFDLHPSLIAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLIRSALADRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDIRFLLRRMPERGTRQTLLFSATLSHRVLELAYEYMNEPEKLVVETETITAARVRQRIYFPSDEEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSLPDIEAYIEQKIPVEPVTSELLTPLPRAARVPVEGEEVDENEGESVGTIFREAREQRAAEEQRRGGGRGGPGSASLSGSGGGRRDGADGKPRPRRKPRVEGQAPATAAPTETPMVAAASAEAPSTSIVADVERTPRKRRRRRNGRPIEGVEPVAATPVAEPAAPRKPTQVVAKPVRAAAKPSGSPSLLSRIGRRLRSLVSGN
SIO_010081: PD885_RS00250
subclass of: SO_0000673
so part of: PD885_RS00250
location: complement(51310..53022)
location: region:51310-53022:-1
so has part: feature:51310-53022:-1:exon

WP_002803641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51310-53022:-1:exon

PD885_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: trxA
locus tag: PD885_RS00255
old locus tag: PD885_00051
so part of: sequence
location: 53221..53562
location: region:53221-53562:1
so has part: feature:53221-53562:1:exon
subclass of: SO_0000010

61892531
type: Gene
SIO_000068: ncbigene

position:53221:1
position: 53221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53562:1
position: 53562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53221-53562:1:exon

PD885_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: trxA
locus tag: PD885_RS00255
old locus tag: PD885_00051
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017159364.1
GO function: GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO process: GO:0006662 - glycerol ether metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin TrxA
translation: MSDKVQHVGDADFDTAVLQSGEPVLVDFWAEWCGPCKMIAPVLDSLADTYQGRLKVAKVNVDQNRALAIKYHVRSIPMLLLFKNGQVQATQIGAVGKGQLTQMIDKTLGGAAA
SIO_010081: PD885_RS00255
subclass of: SO_0000673
so part of: PD885_RS00255
location: 53221..53562
location: region:53221-53562:1
so has part: feature:53221-53562:1:exon

WP_002803639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53221-53562:1:exon

PD885_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: rho
locus tag: PD885_RS00260
old locus tag: PD885_00052
so part of: sequence
location: 53779..55620
location: region:53779-55620:1
so has part: feature:53779-55620:1:exon
subclass of: SO_0000010

61892532
type: Gene
SIO_000068: ncbigene

position:53779:1
position: 53779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55620:1
position: 55620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53779-55620:1:exon

PD885_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: rho
locus tag: PD885_RS00260
old locus tag: PD885_00052
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017171708.1
GO function: GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor Rho
translation: MSDHPSSDIGSVDAPVEKRVRKPRVSKTAVTNEDGGAQQPNLPLPASPAPDAPQLPSRAPAQTSSDGVHVGSAHSASQGGDNYGESREGGQSQQQRFNQAQQQQHQNQAQSQGQGYNQGQAPSQGQSAVQNQQGQGQGQNQQGNRRDRFRNRRDRGPRDRFGNEIGGSGMPSTDGSNEPFIARPHPAVPEGFPVYSLSDLKRMPAQKLLDIADQLNIQEGVARARKQDVIFALLKVLTRHGEGVAADGVLEILPDGFGFLRAAEASYLAGPDDTYISPSQIRRLVLRTGDHLSGRIRFPKDGERYFALSIIDTINGEPLEASKNKVLFENLTPLFPRRRFRLERGDGSTEDITGRILDLMAPQGKGQRALIVSPPKAGKTMMMQQVATAITNNHPEVHMIVLLIDERPEEVTEMQRTVRGEVISSTFDEPAARHVQVAEMVIERAKRLVEHKRDVVILLDSITRLARAYNNVVPSSGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNSEVHLNRRITEKRVYPAIDINRSGTRREDLLIEPELLQKIWILRKLLHPMDEIAAMEFLLDKMKTTKSNDEFFSSMKR
SIO_010081: PD885_RS00260
subclass of: SO_0000673
so part of: PD885_RS00260
location: 53779..55620
location: region:53779-55620:1
so has part: feature:53779-55620:1:exon

WP_040762174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53779-55620:1:exon

PD885_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00265
old locus tag: PD885_00053
pseudo: true
so part of: sequence
location: 55730..>56550
location: region:55730-56550:1
so has part: feature:55730-56550:1:exon
subclass of: SO_0000010

61892533
type: Gene
SIO_000068: ncbigene

position:55730:1
position: 55730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56550:1
position: 56550
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55730-56550:1:exon

PD885_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00265
old locus tag: PD885_00053
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014502954.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS4 family transposase
SIO_010081: PD885_RS00265
subclass of: SO_0000673
so part of: PD885_RS00265
location: 55730..>56550
location: region:55730-56550:1
so has part: feature:55730-56550:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55730-56550:1:exon

PD885_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00270
old locus tag: PD885_00054
so part of: sequence
location: complement(56762..58993)
location: region:56762-58993:-1
so has part: feature:56762-58993:-1:exon
subclass of: SO_0000010

61892534
type: Gene
SIO_000068: ncbigene

position:56762:-1
position: 56762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58993:-1
position: 58993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56762-58993:-1:exon

PD885_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00270
old locus tag: PD885_00054
EC number: 1.1.1.42
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157024.1
GO function: GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]
GO process: GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADP-dependent isocitrate dehydrogenase
translation: MSNTPKIIYTLTDEAPFLATQSLLPIIDAYTDTAGIVVETRDISLAGRILALFPEQLTDAQKIADDLGELGQLATTPEANIIKLPNISASVPQLKAAIKELQSQGYALPEYPDAPQDAAEKDVKARYDTVKGSAVNPVLREGNSDRRAPLSVKNYARKHPHRMGTWSSDSKSHVSHMDEGDFFGSEQSITVVDAGTLKIEFVGNDGSSTVLKDKVAVKAGEIVDAAVLSKRALASFIDAQIEDAKARNVLFSVHLKATMMKVSDPVLFGVVVGEFYKDTLSKHADALRSVGFDPNNGIGDLYARIGALPEDQQAQIKADIQAEYAQRPGLAMVNSDKGITNLHVPSDVIVDASMPAMIRDSGQMWNAEGKLQVTKAVIPDRCYADVYQAVIDDCKAHGAFDPSTMGSVPNVGLMAQKAEEYGSHDKTFQISAAGTVKVTDGSGSVVFEHAVEAGDVWRMCQVKDAPIQDWVKLAVERARLSDTPAVFWLDTARAHDAQVIAKVEQYLKDHDTNGLDIRILPPVEATTLSLERIRKGQDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGLFETGAGGSAPKHVQQFVEENCLRWDSLGEFLALAASLEHLGNRYDNPAATVLAKALDVANGQFLENNKSPARKVGELDNRGSHFYLAMYWAQALAAQTEDTALQAKFAPLAKALTENEATIVAEFNGAQGKPVEIGGYYHPDLAKVSEAMRPSKTFNDVLATLKA
SIO_010081: PD885_RS00270
subclass of: SO_0000673
so part of: PD885_RS00270
location: complement(56762..58993)
location: region:56762-58993:-1
so has part: feature:56762-58993:-1:exon

WP_002803633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56762-58993:-1:exon

PD885_RS21230
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21230
old locus tag: PD885_00055
so part of: sequence
location: 58992..60857
location: region:58992-60857:1
so has part: feature:58992-60857:1:exon
subclass of: SO_0000010

61896432
type: Gene
SIO_000068: ncbigene

position:58992:1
position: 58992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60857:1
position: 60857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58992-60857:1:exon

PD885_RS21230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21230
old locus tag: PD885_00055
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEFALPEGMRKEHWARTRQRAPGASIVACRPAMGKSRFPLQPPNHEQGRAMHFTLDTMTPPSTSSIDSRLLQRLADSRSYARGLAYFEQGRAVLVQATEGRVAANVRGSENYRVTLEWDGTLLQGECDCPIGRGGDFCKHQVAVAFAWARGQAVAPENTSAGRKRSAGTQQPLTEVQEWLADMPAHAMRSLLLELAAADASIGKRLLAQAHMARSTPQEWRKAITTLLGRKRFMDYRASVAYARHIAPLPDLLDQALQRDPMAALDLHEYALRRLMTIYHECDDSSGHVGDALASLARSHVRFAAAAHPQNLPRRLLDLRLQDAWGLMPPLRDYCPPLDERDVAMLQHATLETLQQPLSAAQQLAAETLLEDAARNGGEVDAMLQWFAPRCSSGWDYFQMARRCREHRREREETSWLERGIRACPDDGRLKATLAAAYTRDGMTEEALQLRWEVFTQTPSEDAYLALRHATRAAHVPWESWRARALAAVAANRSLQRHAQDLQVRLFLAEGEHTAALQAGAAHQADIAMTTWERLLQVAESHDASFAVRIYKLLIENKAERTNQQGYSAALILLRSLRRLCEMHKAMSEFDDYLVQIRQHYRAKRTFIEMLSQAFGLGSGS
SIO_010081: PD885_RS21230
subclass of: SO_0000673
so part of: PD885_RS21230
location: 58992..60857
location: region:58992-60857:1
so has part: feature:58992-60857:1:exon

WP_145954027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58992-60857:1:exon

PD885_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00280
old locus tag: PD885_00056
so part of: sequence
location: complement(60992..61552)
location: region:60992-61552:-1
so has part: feature:60992-61552:-1:exon
subclass of: SO_0000010

61892535
type: Gene
SIO_000068: ncbigene

position:60992:-1
position: 60992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61552:-1
position: 61552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60992-61552:-1:exon

PD885_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00280
old locus tag: PD885_00056
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157023.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTKSVSSTLVIALAGVLALSGCRKEANDDSNVAKDPTSGAATDAMPGPAGTPPASDQAGQSTATGADSTGGDAAAGSTVTVSSVAVGTKAAADKTVTPSANIGTKDTIIVSVKTDGSASNVPVAAKLTYQDGQVAGEQNATLTTTGAETTNLSFSKPDGWPAGTYTAQVMVDGKPAGTAQTITVK
SIO_010081: PD885_RS00280
subclass of: SO_0000673
so part of: PD885_RS00280
location: complement(60992..61552)
location: region:60992-61552:-1
so has part: feature:60992-61552:-1:exon

WP_040762171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60992-61552:-1:exon

PD885_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00285
so part of: sequence
location: complement(61643..61718)
location: region:61643-61718:-1
so has part: feature:61643-61718:-1:exon
subclass of: SO_0000011

61892536
type: Gene
SIO_000068: ncbigene

position:61643:-1
position: 61643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61718:-1
position: 61718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61643-61718:-1:exon

PD885_RS00285
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 48664
nc RNA class: other
locus tag: PD885_RS00285
product: sX9 sRNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02228
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: PD885_RS00285
subclass of: SO_0000673
so part of: PD885_RS00285
location: complement(61643..61718)
location: region:61643-61718:-1
so has part: feature:61643-61718:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61643-61718:-1:exon

PD885_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00290
old locus tag: PD885_00057
so part of: sequence
location: complement(61815..62108)
location: region:61815-62108:-1
so has part: feature:61815-62108:-1:exon
subclass of: SO_0000010

61892537
type: Gene
SIO_000068: ncbigene

position:61815:-1
position: 61815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62108:-1
position: 62108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61815-62108:-1:exon

PD885_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00290
old locus tag: PD885_00057
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005923039.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysM peptidoglycan-binding domain-containing protein
translation: MSVDKKADFSNVASSADSTADVAPAADFSNVRTSVQSTAQLIEESVTVQAGDSLSSIAKRHLGDGNLWPRIFEANRETLKDPDKIFPGQMLRLPPKA
SIO_010081: PD885_RS00290
subclass of: SO_0000673
so part of: PD885_RS00290
location: complement(61815..62108)
location: region:61815-62108:-1
so has part: feature:61815-62108:-1:exon

WP_002803629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61815-62108:-1:exon

PD885_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: queF
locus tag: PD885_RS00295
old locus tag: PD885_00058
so part of: sequence
location: complement(62212..63027)
location: region:62212-63027:-1
so has part: feature:62212-63027:-1:exon
subclass of: SO_0000010

61892538
type: Gene
SIO_000068: ncbigene

position:62212:-1
position: 62212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63027:-1
position: 63027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62212-63027:-1:exon

PD885_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: queF
locus tag: PD885_RS00295
old locus tag: PD885_00058
EC number: 1.7.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017171998.1
GO function: GO:0043867 - 7-cyano-7-deazaguanine tRNA-ribosyltransferase activity [Evidence IEA]; GO:0033739 - preQ1 synthase activity [Evidence IEA]
GO process: GO:0008616 - queuosine biosynthetic process [Evidence IEA]
note: Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADPH-dependent 7-cyano-7-deazaguanine reductase QueF
translation: MNTPEDSTLGRETAYPSGYDPSLLFPIPRAAGREAIGLTGALPFIGCDRWHAYELSWLNAHGKPCVATATLHVPSDSPSLIESKSLKLYLNSLNATRFTSAEAVRTRIANDLSTRAGADVSVDFGLPPVDAVGEGESIDTLDVSIDDYGPPNAAYLLAHAQATVEEVLTSALLKSNCPVTGQPDWASVTLRYRGAPIHRDGLLRYLVSFRNHAEFHEQCVERIFNDVLTRCAPEWLVVEARYTRRGGLDINPLRSSPSVPAPLSIFRDLRQ
SIO_010081: PD885_RS00295
subclass of: SO_0000673
so part of: PD885_RS00295
location: complement(62212..63027)
location: region:62212-63027:-1
so has part: feature:62212-63027:-1:exon

WP_002803628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62212-63027:-1:exon

PD885_RS21785
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21785
pseudo: true
so part of: sequence
location: complement(<63240..63461)
location: region:63240-63461:-1
so has part: feature:63240-63461:-1:exon
subclass of: SO_0000010

69055285
type: Gene
SIO_000068: ncbigene

position:63240:-1
position: 63240
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:63461:-1
position: 63461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63240-63461:-1:exon

PD885_RS21785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157020.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: PD885_RS21785
subclass of: SO_0000673
so part of: PD885_RS21785
location: complement(<63240..63461)
location: region:63240-63461:-1
so has part: feature:63240-63461:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63240-63461:-1:exon

PD885_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00305
old locus tag: PD885_00059
so part of: sequence
location: 63725..64963
location: region:63725-64963:1
so has part: feature:63725-64963:1:exon
subclass of: SO_0000010

61892539
type: Gene
SIO_000068: ncbigene

position:63725:1
position: 63725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64963:1
position: 64963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63725-64963:1:exon

PD885_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00305
old locus tag: PD885_00059
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016849343.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
translation: MSRFWKITLLVVAVLVVVFVAMRMMGGSNHGKRSGTQDGNGAENSGPVPVTVVAATTQDVPVYASALGTVTALNTVTVSPQVGGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVSQYEAAVSANDAQMRSAQVQLQFTRVTAPIDGIAGIRGVDAGNIVSSTSTIVTLTQIRPIYVSFNLPERELQAVRSGQAAAPLGVAALDRGDAHVISGDGKLDVIDNRIAADSGTFGARAIFDNADNTLWPGQFVNVRLQLRTISDGTVVPTQAVQRGPDGDYVYVVGTDNTAQMRTVVQGVEVDDSRVQITKGLKPGERVVTEGQFRLKPGSKVSALKPGETPPEPTEAELKAAQNKQERGGGGRRDGGPR
SIO_010081: PD885_RS00305
subclass of: SO_0000673
so part of: PD885_RS00305
location: 63725..64963
location: region:63725-64963:1
so has part: feature:63725-64963:1:exon

WP_002803626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63725-64963:1:exon

PD885_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00310
old locus tag: PD885_00060
so part of: sequence
location: 65055..68291
location: region:65055-68291:1
so has part: feature:65055-68291:1:exon
subclass of: SO_0000010

61892540
type: Gene
SIO_000068: ncbigene

position:65055:1
position: 65055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68291:1
position: 68291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65055-68291:1:exon

PD885_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00310
old locus tag: PD885_00060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003465403.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter permease subunit
translation: MGFSTIFIRRPIATSLLMAGVLLLGILGYRQLPVSALPEIDAPSLVVTTQYPGANATTMASLVTTPLERQFGQISGLQMMTSDSSAGLSTIILQFSMKRDIDIASQDVQAAIRQATLPSSLPYQPVYNRVNPADAAILTLKLTSDSLPLREVNRYADAILAQRLSQVPGVGLVSIAGNVRPAVRIQVNPAQLSNMGLTMESLRSALTQTNVSAPKGSLNGKTQSYSIGTNDQLTDAAQYRETIISYSNDRPVRLADVANVVDGVENDQLAAWADGKPAVLLEIRRQPGANIVQTVEQIRSILPQLQSVLPADVHLEVFSDRTETIRASVREVKLTLVLTIALVVAVIFVFLRRLWATIIPSVAVPLSLAGTFGVMAFAGMSLDNLSLMALVVATGFVVDDAIVMIENIVRYIEQGKSGPEAAEIGAKQIGFTVLSLTVSLVAVFLPLLLMPGVTGRLFHEFAWVLSIAVVISMLVSLTLTPMMCAYLLKPDALPDGEDAHERAAAAGKTNLWTRTVGAYERSLDWVLAHQPLTLAVAIGAVALTVVLYVAIPKGLLPEQDTGLITGVVQADQNVAFPQMEQRTQAVAAALGKDPAVTGVAAFIGAGTMNPTINQGQLSIVLKTRGDRDGLDEVLPRLQKAVAGIPGVALFLKPVQDVTLDTRVAATEYQYSISDVDSTELAAWAGRMTEAMRKLPELADVDNNLANQGRALELTIDRDKAGTLGVPMQTIDDTLYDAFGQRQISTIFTELNQYRVVLEVAPEFRSSTSLMNQLAVASNGSGALTGTNATSFGQVTSSNSSTATGVGAQNTGIVVGAGSIIPLAALAEAKVTNTPLVVSHQQQLPAVTISFNLAPGHSLSQAVAAIEKAREDLKIPTQVHAQFVGKAAEFTGSQTDIVWLLLASIVVIYIVLGVLYESYIHPLTIISTLPPAGVGALLALMMCGLSLSVDGIVGIVLLIGIVKKNAIMMIDFAIDARREGANAHDAIRRACLLRFRPIMMTTAAAMLGALPLALGTGIGSELRRPLGIAIVGGLLLSQLVTLYTTPVIYLYMERAGERLRAWRERHAVAAAHGRAEGRA
SIO_010081: PD885_RS00310
subclass of: SO_0000673
so part of: PD885_RS00310
location: 65055..68291
location: region:65055-68291:1
so has part: feature:65055-68291:1:exon

WP_002803624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65055-68291:1:exon

PD885_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00315
old locus tag: PD885_00062
so part of: sequence
location: 68446..71583
location: region:68446-71583:1
so has part: feature:68446-71583:1:exon
subclass of: SO_0000010

61892541
type: Gene
SIO_000068: ncbigene

position:68446:1
position: 68446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71583:1
position: 71583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68446-71583:1:exon

PD885_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00315
old locus tag: PD885_00062
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017171705.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter permease subunit
translation: MNISAPFIKRPIGISLLAIGLFVIGLMCYLRLGVAALPNIQIPVIFVHATQSGADASTMASTVTAPLERHLGQLPGIDHMRSSSSESSSIVFMVFQSNRNIDSAAQDVQTAVNSAQSDLPSGLGTPMYQKANPNDDPVIAIALTSDTQSADELYNVADSLLAQRLRRITGISSVDIAGASTPAVRVDVDLRALNALGLTPDDLRNAVRAANVTSPTGFLSDGNTTMAIVANDAVAKAADFAQLAIATQSNGRIVRLGDVATVYDGQQDAYQAAWFDGKPAVVMYAFTRAGANIVETVDQVKAQIPELRAYLHPGTKLTPYLDRTPTIRASLHEVQAALMISLAMVVLTMALFLRRLAPTLIAAVTVPLSLAGSALVMYMLGFTLNNLSLLALVIAIGFVVDDAIVVIENIMRHLDEGMPRLDAALAGAREIGFTIVSITASLVAVFIPMLFASGMIGAFFREFTVTLVAAIVVSMLVSLTLTPALCSRFLSAHTEPEKPSRFSALLDRMHARMLAVYTVALDFSLRHALLLALTPLLLIAATIFLGGAVKKGAFPAQDTGLIWGRANSSATVSFADMVSRQRRITDMLMADPAVKTVGARLGSGRQGSSASFNIELKQRDEGRRDTTAQVVARLSAKADRYPDLDLRLRAIQDLPSDGGGGTSQGAQYRVSLQGNDLAQLQEWLPKLQTALKKNPRLRNVGTDVDTSGLRQNIVIDRAKAARLGISVGAIDGALYGAFGQRSISTIYSDLNQYSVVVNALPSQTATPRALDQIFVPNRAGQMVPITAVANQMPGLAPPQIIHENQYTTMDLSYNLAPGVSTGEADLIIKSTVDGLRMPDGIRLSGDDSFNVQLSPSAMGVLLLAAVLTVYIVLGMLYESLIHPVTILSTLPAAGVGALLALFITNTELSVISMIALVLLIGIVKKNAIMMIDFALVAQRTHGMDARAAAREASIVRFRPIMMTTMVAILAAVPLAVGLGEGSELRRPLGIAMIGGLVFSQGLTLLSTPALYVIFSCLSERWKARRTRARARRAARAAARRPAAAH
SIO_010081: PD885_RS00315
subclass of: SO_0000673
so part of: PD885_RS00315
location: 68446..71583
location: region:68446-71583:1
so has part: feature:68446-71583:1:exon

WP_002803622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68446-71583:1:exon

PD885_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00320
old locus tag: PD885_00063
so part of: sequence
location: 71899..73368
location: region:71899-73368:1
so has part: feature:71899-73368:1:exon
subclass of: SO_0000010

61892542
type: Gene
SIO_000068: ncbigene

position:71899:1
position: 71899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73368:1
position: 73368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71899-73368:1:exon

PD885_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00320
old locus tag: PD885_00063
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDALAGIAMREDRTGAELGDAALRAHYPLRPVQVSAEQTDPTLPAFFRHAPHAPHVVVAPPLPAAPSTHTGSTHADTSSLSSSSAAASTPPPAVDAHTRMQQDHAAQQHQQRIQQAPSHRQTMAQPSHTAPAPEKPASVDMQEQARMAQPQQQEPHTQAAREQQHHLAQHHAQVHRQAMEAQQRDYAQRHTQDTRPHPHTQPQAAEPMLYTPPTRPPGSDEHLTDFRHPDHPLHKRYILFKNALEQSHTLPRNGDTLPYGPAQQERLAAGFTDALGAEMRFNHDIRGFKQHQGQLLAYEQPPSFDQKGKVLRIDPQHALAQSPEQHAATWRAREATHVPAPPSRAIAPVVITAEDMRHPAHPRHALFAQARDAIADVHERWGRLVPDAAQLDRHAAQVVVETRKLGQTEVEKIYLGMPQGHATQMPHYGVQSNGELWARVSAPQLTQAPDVAQASQQLQTVEQQNLAEQAMQAQRAAQMQGQMQGQAMA
SIO_010081: PD885_RS00320
subclass of: SO_0000673
so part of: PD885_RS00320
location: 71899..73368
location: region:71899-73368:1
so has part: feature:71899-73368:1:exon

WP_156775337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71899-73368:1:exon

PD885_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00335
old locus tag: PD885_00065
so part of: sequence
location: complement(74723..76090)
location: region:74723-76090:-1
so has part: feature:74723-76090:-1:exon
subclass of: SO_0000010

61892544
type: Gene
SIO_000068: ncbigene

position:74723:-1
position: 74723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76090:-1
position: 76090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74723-76090:-1:exon

PD885_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00335
old locus tag: PD885_00065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007973536.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VOC family protein
translation: MRDTVFVSPDQIRSLFAQAMSDMYRAEVPLYGDLMTLVAQVNADTLRADAALAVRLQRNDERARLDLERHGAIRVGTAQELATLRRLFAVMGMHAVGYYDLSVAGVPVHSTAFRPIDDVALSANPFRVFTSLLRLELIEDAALREQAAQILEQRQIFTAGVLELIEQRERVGGLDATQAQQFVAEALETFRWHGDACVSLQTYRALSQAHKLIADVVSFHGPHINHLTPRTLDIDAAQAQMQRAGIAAKTVIEGPPRRRIPILLRQTSFKALEEPVRFLGDSGQAEHGTHTARFGEIEQRGLALTPKGRALYDALLAQARDSDGAGSTGTDYATRLQTAFVAFPDDEAVLRQEGLGYFRYALTDAGRADPAQVAAMPAETAIALGLVSADPIIYEDFLPVSAAGIFQSNLGGAEQRAYAAHSSKDSFEQALGSQVHDAFALYAQLERASLQALLG
SIO_010081: PD885_RS00335
subclass of: SO_0000673
so part of: PD885_RS00335
location: complement(74723..76090)
location: region:74723-76090:-1
so has part: feature:74723-76090:-1:exon

WP_002803617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74723-76090:-1:exon

PD885_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00345
old locus tag: PD885_00066
so part of: sequence
location: complement(76254..76868)
location: region:76254-76868:-1
so has part: feature:76254-76868:-1:exon
subclass of: SO_0000010

61892545
type: Gene
SIO_000068: ncbigene

position:76254:-1
position: 76254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76868:-1
position: 76868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76254-76868:-1:exon

PD885_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00345
old locus tag: PD885_00066
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017112508.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRHHRRMPAPSPSLLRSLPLRMALLLPALAAAQAAPAAAPAPEDPAPAVMMPGTGDAWVNQHLADMDSYAQRYPDSFIDEVARYTGTPRGYVQALLQVHGWHAGDIYFACFWAQTVQLSCRDSVRAYSRDHHDSWEGVIARLSVAPDPVHMRALRHAIVASYDHWERPISLDPLLRRQLGDHAQRLDAARQAGKAAEAAAQAGL
SIO_010081: PD885_RS00345
subclass of: SO_0000673
so part of: PD885_RS00345
location: complement(76254..76868)
location: region:76254-76868:-1
so has part: feature:76254-76868:-1:exon

WP_065974996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76254-76868:-1:exon

PD885_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00350
old locus tag: PD885_00067
pseudo: true
so part of: sequence
location: 77202..>77671
location: region:77202-77671:1
so has part: feature:77202-77671:1:exon
subclass of: SO_0000010

61892546
type: Gene
SIO_000068: ncbigene

position:77202:1
position: 77202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77671:1
position: 77671
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77202-77671:1:exon

PD885_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00350
old locus tag: PD885_00067
inference: COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: PD885_RS00350
subclass of: SO_0000673
so part of: PD885_RS00350
location: 77202..>77671
location: region:77202-77671:1
so has part: feature:77202-77671:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:77202-77671:1:exon

PD885_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00355
old locus tag: PD885_00068
so part of: sequence
location: 77841..78647
location: region:77841-78647:1
so has part: feature:77841-78647:1:exon
subclass of: SO_0000010

61892547
type: Gene
SIO_000068: ncbigene

position:77841:1
position: 77841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78647:1
position: 78647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77841-78647:1:exon

PD885_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00355
old locus tag: PD885_00068
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002801519.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MKPRKPYSTDISDEEWAFAAPYLTLMDVQAPQRKYELRAMFNALRWIARAGAPWRLLPNDFPPWEAVYQQTQRWLQAGCFEAMVSDLRSLLRVAQGKKGQPSAVIFDARTLQSTCESGPRAGYDGYKRKKGSKVHMAVDTLGHLLAVQVTPANEQERAQVRSLAQEVQHVTGETVKIAFVDQGYTGQEPAQAATEEGIELHVIKLQEAKKGFVLLPRRWVVERSFGWANRFRRLARDYERLPETLAGLHFVVFTILMLGNAATLFQSS
SIO_010081: PD885_RS00355
subclass of: SO_0000673
so part of: PD885_RS00355
location: 77841..78647
location: region:77841-78647:1
so has part: feature:77841-78647:1:exon

WP_002801519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77841-78647:1:exon

PD885_RS21235
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21235
old locus tag: PD885_00069
pseudo: true
so part of: sequence
location: <78997..79203
location: region:78997-79203:1
so has part: feature:78997-79203:1:exon
subclass of: SO_0000010

61896433
type: Gene
SIO_000068: ncbigene

position:78997:1
position: 78997
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:79203:1
position: 79203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78997-79203:1:exon

PD885_RS21235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21235
old locus tag: PD885_00069
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003485112.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF4380 domain-containing protein
SIO_010081: PD885_RS21235
subclass of: SO_0000673
so part of: PD885_RS21235
location: <78997..79203
location: region:78997-79203:1
so has part: feature:78997-79203:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78997-79203:1:exon

PD885_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00360
old locus tag: PD885_00070
so part of: sequence
location: 79272..80873
location: region:79272-80873:1
so has part: feature:79272-80873:1:exon
subclass of: SO_0000010

61892548
type: Gene
SIO_000068: ncbigene

position:79272:1
position: 79272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80873:1
position: 80873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79272-80873:1:exon

PD885_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00360
old locus tag: PD885_00070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014091511.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucan biosynthesis protein D
translation: MQRRHFLQNAAAALAALGLPALPQWALAAKAVGLRRLGQPQPFDYAWLKGQARELGKAPYKSHTQVLPGPLEALNWDQYQSIRYRQGHALWAGGNGKFQAKFFHLGLFFHTPVDIYDIVDGKAQQLAYDPTAFDYGSSGLDGTQFPKDLGFAGFRLNSRKDPDRDFSAFLGASYFRAVGKEGQYGQSARGLAIDTGTGGPEEFPDFIAYYLEQPADDSDTVVVYGLLDSPSVAGAYRFAITNGEVLVMDIDSALYPRKTIERLGIGPCTSMYQVGENDSRMDWDWRPEIHDTDGLAMWTGVGEWIWRPLCNPANLRFNMFVDENPRGFGLLQRDRNFDHYQDDGVFYEKRPCLWVEPKSGWGKGSVQLVEIPTVDETVDNIVAFWNLQAKPQAGQELLMGYRLYWGAHPPASSPLAHCVATRTGLGGIVGKKRSHFSWRFAVDFAGGELAALVNEPKAKVETVLQVSRGTTEIVSARPLRELKGYRAMFDLVPPDDSTQQIDIRLYLRANGKPLTETWLYQWTPPPVSERKIY
SIO_010081: PD885_RS00360
subclass of: SO_0000673
so part of: PD885_RS00360
location: 79272..80873
location: region:79272-80873:1
so has part: feature:79272-80873:1:exon

WP_088057086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79272-80873:1:exon

PD885_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00365
old locus tag: PD885_00071
so part of: sequence
location: complement(81418..82053)
location: region:81418-82053:-1
so has part: feature:81418-82053:-1:exon
subclass of: SO_0000010

61892549
type: Gene
SIO_000068: ncbigene

position:81418:-1
position: 81418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82053:-1
position: 82053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81418-82053:-1:exon

PD885_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00365
old locus tag: PD885_00071
EC number: 2.7.1.21
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006452668.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thymidine kinase
translation: MAKLYFYYSAMNAGKTTTLLQSAHNYRERGMRTLILTPKLDHRAGSGVVASRIGLRADGRPFDRDTELQQLIGRDIQAEGALHCVLVDEAQFLSRAQVWQLSEVVDRLRIPVLCYGLRTDFRGELFEGSQFLLAWADELDEIKTICHSGSKATMTVRVDAQGHAVQDGPQVEIGGNERYVSVSRAEFKKIMRGEGRIDPLQIVLPLPPAEA
SIO_010081: PD885_RS00365
subclass of: SO_0000673
so part of: PD885_RS00365
location: complement(81418..82053)
location: region:81418-82053:-1
so has part: feature:81418-82053:-1:exon

WP_002803605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81418-82053:-1:exon

PD885_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: rep
locus tag: PD885_RS00370
old locus tag: PD885_00072
so part of: sequence
location: 82166..84142
location: region:82166-84142:1
so has part: feature:82166-84142:1:exon
subclass of: SO_0000010

61892550
type: Gene
SIO_000068: ncbigene

position:82166:1
position: 82166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84142:1
position: 84142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82166-84142:1:exon

PD885_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: rep
locus tag: PD885_RS00370
old locus tag: PD885_00072
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014091509.1
GO function: GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA helicase Rep
translation: MHGLNPPQRAAVLHCEGPLLVLAGAGSGKTRVIVEKIAHLIAIGRYPAKRIAAITFTNKSAKEMRERVAKRIRGDGADGLTICTFHALGLKFLQIEHAAAGLKRGFSIFDSDDAAAQIKDLMHGAKPDAIEDAKNLISRAKNAGLSPEQAMAAARSNREKEAASLYERYQARLTTFNAVDFDDLIRLPVQILEANEEIVMGWRERIGYLLVDECQDTNDAQYRLLKMLAGPRGNFTCVGDDDQSIYAWRGANPENLQQMGCDYPALKIIKLEQNYRCSNRVLRAANALIAHNPHEHLKTLWSDQADGERIRVWECRDGEHEAEKVAAEISFLGTAKQVPWSDFCILFRGNFQSRPLEKALQLLRVPYHLTGGTAFLERQEVKDLLSWLRLIVNPDDDAAFLRAVQSPKREVGATSLARLAELASAKSVPMSRAAESMGALQHLPPRAANGLSAFNDILCDMRQHSATMSAGELVRMLADKSGLLNDLRNQSKDETGFQRRKRNLDELAEWFEGGPRGASASDLAAQLALLSRNDKDDGGNQVRMMTMHASKGLEFRYVFIVGCEDGVLPHEVSLEEGNLQEERRLLYVGITRAKQQLWMSYSKLTRKFGEHVRLKPSRFFDELPAEELQRDGADPVADAERKKERASAGLAAIQALFD
SIO_010081: PD885_RS00370
subclass of: SO_0000673
so part of: PD885_RS00370
location: 82166..84142
location: region:82166-84142:1
so has part: feature:82166-84142:1:exon

WP_002803604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82166-84142:1:exon

PD885_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00375
so part of: sequence
location: 84363..84438
location: region:84363-84438:1
so has part: feature:84363-84438:1:exon
subclass of: SO_0000011

61892551
type: Gene
SIO_000068: ncbigene

position:84363:1
position: 84363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84438:1
position: 84438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84363-84438:1:exon

PD885_RS00375
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 48664
nc RNA class: other
locus tag: PD885_RS00375
product: sX9 sRNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02228
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: PD885_RS00375
subclass of: SO_0000673
so part of: PD885_RS00375
location: 84363..84438
location: region:84363-84438:1
so has part: feature:84363-84438:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84363-84438:1:exon

PD885_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00390
old locus tag: PD885_00074
so part of: sequence
location: 85074..87338
location: region:85074-87338:1
so has part: feature:85074-87338:1:exon
subclass of: SO_0000010

61892552
type: Gene
SIO_000068: ncbigene

position:85074:1
position: 85074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87338:1
position: 87338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85074-87338:1:exon

PD885_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00390
old locus tag: PD885_00074
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPDDSPPPSRPLHHSPLWRADAPESQEATAQQPAFEDAAIHEERPAPVDCSSTFGRKRKVPIPRGTGSSDADLSYSADKELIAGFLDGAEKGGSNVNTAKKYSFLLISFSAWLKQQKKGGLKDRLSQDELTRDAEEFQRQTGRTNVTVALTHLRSVESHGTVTISTLPRHLTPAGDAQLINDASSAISRRYLTELRAFSEWLHAAHKEGLCAPGRLDSQSLEGDANTFLIEKERLSVYTVFLALRKLRAFCRGERPAVQSNVRSNKREISDVDRQLKEQYQYALSIAFSASGPEKKYANGETYSGKMAGSMHTFSAWLKAKKKASMATRLHAPTLDEDFNLFKDAKYPRDTRAIGNMLTQVREMYPSDVQSPDQANKRQAHDLDRQLSEQFKAALLAPGRETTSIKREKYADMLSAHVRHFSAWLHNNDKAPMASRLHEPMLDDDLNLYIRGKTLGYKSVLRHMLMQVRQVCPSNVQLPDLGSTAEPSGSACSSLLPSTLPSGLPQAPENVLTPDTPAERVAEPSLPAQPEASSPISEFDWDALDEVDGFQPPPQSDLDFETLADELMAPSWSVQPEASSSTFPVDSDAPHQASGLPQAHESSWTLETLAEELLGPSWSAQPEASSSTFPVDSDALHQADGLPQTHESSWTLETLEKELLGPSWSAQLETSSSTFPVDSDTVHQAGGLPQADESSWDFEKLVEEEMGPSWSAQSGASIYDFAFDWNALHPENAVPHRTTAMPQASLPTFDEDDT
SIO_010081: PD885_RS00390
subclass of: SO_0000673
so part of: PD885_RS00390
location: 85074..87338
location: region:85074-87338:1
so has part: feature:85074-87338:1:exon

WP_145954086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85074-87338:1:exon

PD885_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00395
so part of: sequence
location: 87399..87465
location: region:87399-87465:1
so has part: feature:87399-87465:1:exon
subclass of: SO_0000011

61892553
type: Gene
SIO_000068: ncbigene

position:87399:1
position: 87399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87465:1
position: 87465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87399-87465:1:exon

PD885_RS00395
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 48664
nc RNA class: other
locus tag: PD885_RS00395
product: sX9 sRNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02228
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: PD885_RS00395
subclass of: SO_0000673
so part of: PD885_RS00395
location: 87399..87465
location: region:87399-87465:1
so has part: feature:87399-87465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87399-87465:1:exon

PD885_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00400
old locus tag: PD885_00075
so part of: sequence
location: complement(87672..88340)
location: region:87672-88340:-1
so has part: feature:87672-88340:-1:exon
subclass of: SO_0000010

61892554
type: Gene
SIO_000068: ncbigene

position:87672:-1
position: 87672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88340:-1
position: 88340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87672-88340:-1:exon

PD885_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00400
old locus tag: PD885_00075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010374589.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF480 domain-containing protein
translation: MPEISPPPVLDTAQARVLGCLIEKEATTPDAYPLTVNAAQVAANQKTAREPVLNLETGVVHHALRQLETMGLVRQQFSSRAERYEHRLGSMLDLTRQQVALIGLLLLRGPQTLGELYARSERLARFNDADDVRHHLDRLIQRTLAVQLPRASSQREERYTHLLSGELDVEALQAAAARAAPSARNSADSSELEARVQSLEATVAELQDALAAVQARLEAAGA
SIO_010081: PD885_RS00400
subclass of: SO_0000673
so part of: PD885_RS00400
location: complement(87672..88340)
location: region:87672-88340:-1
so has part: feature:87672-88340:-1:exon

WP_002803599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87672-88340:-1:exon

PD885_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00405
old locus tag: PD885_00076
so part of: sequence
location: 88651..89643
location: region:88651-89643:1
so has part: feature:88651-89643:1:exon
subclass of: SO_0000010

61892555
type: Gene
SIO_000068: ncbigene

position:88651:1
position: 88651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89643:1
position: 89643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88651-89643:1:exon

PD885_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00405
old locus tag: PD885_00076
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017159717.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5'-nucleotidase, lipoprotein e(P4) family
translation: MDAMRPSLYAPLPLLACTALALSACKPSDKGPVQSAAVSATAAPSATADKTATPPVATTAPAGDDNLNAVLWMQRSEEYRAVAEQTYRAAADKLDTALKQANWDALVPKERSNAATGLKPAVVLDVDETVLDNSPYQARLLRDGKEYDELSWDQWVAEKKATAIPGVVDFAKAASARGITLIYISNRAVHLKDATLTNLRSVGLPVADDSVFLGLGTLVQGCEQSGSEKNCRRQLAGQKYRVLMQFGDQLGDFVQVTANTGQARGALLQQYHDWFGERWWMLPNPNPNPNPNPNPNPSYGGREPAQFNNDFAQPWQARHDAKRAALEVAR
SIO_010081: PD885_RS00405
subclass of: SO_0000673
so part of: PD885_RS00405
location: 88651..89643
location: region:88651-89643:1
so has part: feature:88651-89643:1:exon

WP_088057087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88651-89643:1:exon

PD885_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: pyrF
locus tag: PD885_RS00410
old locus tag: PD885_00077
so part of: sequence
location: 89640..90371
location: region:89640-90371:1
so has part: feature:89640-90371:1:exon
subclass of: SO_0000010

61892556
type: Gene
SIO_000068: ncbigene

position:89640:1
position: 89640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90371:1
position: 90371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89640-90371:1:exon

PD885_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: pyrF
locus tag: PD885_RS00410
old locus tag: PD885_00077
EC number: 4.1.1.23
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010377021.1
GO function: GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO process: GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: orotidine-5'-phosphate decarboxylase
translation: MSRVPLPLAAHERLIFALDVPSHDEAIAWVDRLGEAVSFYKIGMELLASGEYFHVLDALAKRDKRVFVDLKFFDIPATVAGTIRRLAQWPVSYCTIHGWHAGMLQAAVEANHGDMRLLAVTVLTSMGRPDLAAMGIDREPVEVVVERALAAQAAGIDGVIASGQEAGPIRRATGRAFSIVCPGIRPGGPVGDDQQRTVGVAQAFTDGADAIVVGRPIRLAADPAAVAAAIQTEILAAAGQQQR
SIO_010081: PD885_RS00410
subclass of: SO_0000673
so part of: PD885_RS00410
location: 89640..90371
location: region:89640-90371:1
so has part: feature:89640-90371:1:exon

WP_002803596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89640-90371:1:exon

PD885_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00415
pseudo: true
so part of: sequence
location: complement(90613..>90910)
location: region:90613-90910:-1
so has part: feature:90613-90910:-1:exon
subclass of: SO_0000010

61892557
type: Gene
SIO_000068: ncbigene

position:90613:-1
position: 90613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90910:-1
position: 90910
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90613-90910:-1:exon

PD885_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012443718.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tryptophan 7-halogenase
SIO_010081: PD885_RS00415
subclass of: SO_0000673
so part of: PD885_RS00415
location: complement(90613..>90910)
location: region:90613-90910:-1
so has part: feature:90613-90910:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90613-90910:-1:exon

PD885_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00420
pseudo: true
so part of: sequence
location: 91143..>91444
location: region:91143-91444:1
so has part: feature:91143-91444:1:exon
subclass of: SO_0000010

61892558
type: Gene
SIO_000068: ncbigene

position:91143:1
position: 91143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91444:1
position: 91444
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91143-91444:1:exon

PD885_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: PD885_RS00420
subclass of: SO_0000673
so part of: PD885_RS00420
location: 91143..>91444
location: region:91143-91444:1
so has part: feature:91143-91444:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91143-91444:1:exon

PD885_RS21790
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21790
pseudo: true
so part of: sequence
location: complement(<91553..91693)
location: region:91553-91693:-1
so has part: feature:91553-91693:-1:exon
subclass of: SO_0000010

69055286
type: Gene
SIO_000068: ncbigene

position:91553:-1
position: 91553
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:91693:-1
position: 91693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91553-91693:-1:exon

PD885_RS21790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017159719.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tryptophan 7-halogenase
SIO_010081: PD885_RS21790
subclass of: SO_0000673
so part of: PD885_RS21790
location: complement(<91553..91693)
location: region:91553-91693:-1
so has part: feature:91553-91693:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91553-91693:-1:exon

PD885_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00425
old locus tag: PD885_00079
pseudo: true
so part of: sequence
location: complement(91751..>94561)
location: region:91751-94561:-1
so has part: feature:91751-94561:-1:exon
subclass of: SO_0000010

61892559
type: Gene
SIO_000068: ncbigene

position:91751:-1
position: 91751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94561:-1
position: 94561
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91751-94561:-1:exon

PD885_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00425
old locus tag: PD885_00079
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017171731.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: TonB-dependent receptor
SIO_010081: PD885_RS00425
subclass of: SO_0000673
so part of: PD885_RS00425
location: complement(91751..>94561)
location: region:91751-94561:-1
so has part: feature:91751-94561:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91751-94561:-1:exon

PD885_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00430
old locus tag: PD885_00080
so part of: sequence
location: 94881..95855
location: region:94881-95855:1
so has part: feature:94881-95855:1:exon
subclass of: SO_0000010

61892560
type: Gene
SIO_000068: ncbigene

position:94881:1
position: 94881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95855:1
position: 95855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94881-95855:1:exon

PD885_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00430
old locus tag: PD885_00080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010377011.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLSTARAGRFQSIAWALLAALCVSGCQRNDTAAALPGAKAEPAAAMQSMTLPLRRNDLVAYARIRVTPAQYAQLEIAWRSGASRWPLTELPLPNEVGALLGSLSAPGAERGLQQSFDAQLAGQAQGIAQAAQSLGQFGVQYLRSRNDYRPEQRAHYVQLVDALSAWAATAPLADRTRAKASIADLVAAARATGIRSDADLQRLGMEESLRRLGPFWSACKKVLKRYDLSLDNSLDGLRAGLIKQDGDRAQVRLRYLLAAHDIDLTVDLIKRDGHWYQQQTQDEVQALLSAAPAQPLPDAAATPDTPAAAPAMPANTGQRPAGR
SIO_010081: PD885_RS00430
subclass of: SO_0000673
so part of: PD885_RS00430
location: 94881..95855
location: region:94881-95855:1
so has part: feature:94881-95855:1:exon

WP_002803590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94881-95855:1:exon

PD885_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: plsB
locus tag: PD885_RS00435
old locus tag: PD885_00081
so part of: sequence
location: 95855..98524
location: region:95855-98524:1
so has part: feature:95855-98524:1:exon
subclass of: SO_0000010

61892561
type: Gene
SIO_000068: ncbigene

position:98524:1
position: 98524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95855-98524:1:exon

PD885_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: plsB
locus tag: PD885_RS00435
old locus tag: PD885_00081
EC number: 2.3.1.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017155190.1
GO function: GO:0004366 - glycerol-3-phosphate O-acyltransferase activity [Evidence IEA]
GO process: GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol-3-phosphate 1-O-acyltransferase PlsB
translation: MTAMPEQNPLPFPNGQPAPPSAAAAANPGATSVALSAAPSALDTPPLTTPVLAAGRNAKRPWWARLLGRLADPWLSLTIEPDQPGRYDDGSPVVYVLEDYGLSNALILDKACREVGLPSPLVPLPGDPLERKRAYLALSRRSSSNSLIPEQRGGKTHSDSLAKLLQAHRVRDELDVHLVPVSIFVGRAPDKQSGWFAVLFSENWALVGRFRRLLSVLLNGRTTIVRFAQPISLRQIVAEGLPPERTLRKLQRVLRMHFRRIREAVIGPDLSTRRLLVDQVLAADSVREAIIIQAKRDNSKHVDAWRKAHAYAWEIAADYSSPVVRSASFLLTHVWNRIYAGVLVHHLDKLKQAAPGHEVVYVPSHRSHMDYLLLSYLLYERGIVPPHIVAGINLNLPMVGTLLRKGGAFFIRRSIRGNALYSAVLSEYVAQLVAGGYSIEYFVEGGRSRTGRLLQPKGGMIAMTLRAYLRQPRKPVLFQPVYIGYEKLMEGNSYLDELTGRPKEKESIWRLLWSIPKVLKQNYGQVVVNFGEPIALSEVLARHAPDWDGQPLPDDEKPTWLAPAVDTLSTQIQTRINCAADVNPINLLALALLSTPKHAMGEADLIAQIELCKKLLAEMPYSHRVTVTPHTPARIITHAEEINVLTRVSHPLGDVLSVSGDTAVLLSYFRNNVLHLFTASSWVACCFQNNRRMSRAGLLRLGRTVYPFLQAELFLPWSEDRFAERIEQTIDMFVREGLLLNVTDDDGGILARNTGQTDEVFRLRAIGHSLQQAFERYYIAISVLVKNGPGVLGASELESLCQQAAQRLSLLYAPAAPEFFDKTLFRSFIQKLRELRLVWPDENSKLMFDERLDAWAKDAKFILGRELRHTIERVSPEAAKSQEAVKPQD
SIO_010081: PD885_RS00435
subclass of: SO_0000673
so part of: PD885_RS00435
location: 95855..98524
location: region:95855-98524:1
so has part: feature:95855-98524:1:exon

WP_040762146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95855-98524:1:exon

PD885_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00440
old locus tag: PD885_00082
so part of: sequence
location: 99004..99984
location: region:99004-99984:1
so has part: feature:99004-99984:1:exon
subclass of: SO_0000010

61892562
type: Gene
SIO_000068: ncbigene

position:99004:1
position: 99004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99984:1
position: 99984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99004-99984:1:exon

PD885_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00440
old locus tag: PD885_00082
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005932469.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc-binding dehydrogenase
translation: MRAALHTQFGDPAKVLGLGERPTPQPGRGQVRIAMRRSPMHNHDLWTVRGNYGYKPELPAIGGSEAAGVIDALGKDFVDLPVGQRVVAAGVHESWAEYFLASADGVVPLPDALDDDRGCQLIAMPLSALMLIEFLHVEKGDWIVQNTANGAVGKTVAMFAAARGINVINLVRRDAGVDELKALGIGNGFSTAQGGWQDQVRALAGNAPIVRAIDSVAGKAAGDLLGLLAESGELVSFGSMTGEPLEISSGDVIFKQATVRGFWGSKVMQATQAEDKRRMIGELLNAALDGRLALPVEAVFDLEDAGKAAAASAEPGRRGKILLRAG
SIO_010081: PD885_RS00440
subclass of: SO_0000673
so part of: PD885_RS00440
location: 99004..99984
location: region:99004-99984:1
so has part: feature:99004-99984:1:exon

WP_002803588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99004-99984:1:exon

PD885_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00445
old locus tag: PD885_00083
so part of: sequence
location: complement(100216..100419)
location: region:100216-100419:-1
so has part: feature:100216-100419:-1:exon
subclass of: SO_0000010

61892563
type: Gene
SIO_000068: ncbigene

position:100216:-1
position: 100216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100419:-1
position: 100419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100216-100419:-1:exon

PD885_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00445
old locus tag: PD885_00083
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008573820.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YdcH family protein
translation: METLSPAEIVEQIAELRRAHRALDEEIQRLPANMEDELQMKRLKKRKLHIKDCITRLEMELVPDEPA
SIO_010081: PD885_RS00445
subclass of: SO_0000673
so part of: PD885_RS00445
location: complement(100216..100419)
location: region:100216-100419:-1
so has part: feature:100216-100419:-1:exon

WP_040762144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100216-100419:-1:exon

PD885_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00450
pseudo: true
so part of: sequence
location: <100608..>101020
location: region:100608-101020:1
so has part: feature:100608-101020:1:exon
subclass of: SO_0000010

61892564
type: Gene
SIO_000068: ncbigene

position:100608:1
position: 100608
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:101020:1
position: 101020
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100608-101020:1:exon

PD885_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611839.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: PD885_RS00450
subclass of: SO_0000673
so part of: PD885_RS00450
location: <100608..>101020
location: region:100608-101020:1
so has part: feature:100608-101020:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100608-101020:1:exon

PD885_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00455
old locus tag: PD885_00085
so part of: sequence
location: complement(101415..102221)
location: region:101415-102221:-1
so has part: feature:101415-102221:-1:exon
subclass of: SO_0000010

61892565
type: Gene
SIO_000068: ncbigene

position:101415:-1
position: 101415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102221:-1
position: 102221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101415-102221:-1:exon

PD885_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00455
old locus tag: PD885_00085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002801519.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MKPRKPYSTDISDEEWAFAAPYLTLMDVQAPQRKYELRAMFNALRWIARAGAPWRLLPNDFPPWEAVYQQTQRWLQAGCFEAMVSDLRSLLRVAQGKKGQPSAVIFDARTLQSTCESGPRAGYDGYKRKKGSKVHMAVDTLGHLLAVQVTPANEQERAQVRSLAQEVQHVTGETVKIAFVDQGYTGQEPAQAATEEGIELHVIKLQEAKKGFVLLPRRWVVERSFGWANRFRRLARDYERLPETLAGLHFVVFTILMLGNAATLFQSS
SIO_010081: PD885_RS00455
subclass of: SO_0000673
so part of: PD885_RS00455
location: complement(101415..102221)
location: region:101415-102221:-1
so has part: feature:101415-102221:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:101415-102221:-1:exon

PD885_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00460
so part of: sequence
location: complement(102543..102616)
location: region:102543-102616:-1
so has part: feature:102543-102616:-1:exon
subclass of: SO_0000011

61892566
type: Gene
SIO_000068: ncbigene

position:102543:-1
position: 102543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102616:-1
position: 102616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102543-102616:-1:exon

PD885_RS00460
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 48664
nc RNA class: other
locus tag: PD885_RS00460
product: sX9 sRNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02228
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: PD885_RS00460
subclass of: SO_0000673
so part of: PD885_RS00460
location: complement(102543..102616)
location: region:102543-102616:-1
so has part: feature:102543-102616:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:102543-102616:-1:exon

PD885_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00465
old locus tag: PD885_00086
so part of: sequence
location: complement(102759..103862)
location: region:102759-103862:-1
so has part: feature:102759-103862:-1:exon
subclass of: SO_0000010

61892567
type: Gene
SIO_000068: ncbigene

position:102759:-1
position: 102759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103862:-1
position: 103862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102759-103862:-1:exon

PD885_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00465
old locus tag: PD885_00086
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002803827.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction endonuclease
translation: MDFIDQLRALARDISTNRALIQMEEATKNAMVMPLIQILGYNVFDPLEVTPEIVADVGTKKGEKVDYAILRDGKPIILFECKRAGAELSINHASQLFRYFHVTAARFGVPTNGLVYRFFTDLEQPNKMDEKPFFEFNILDFKDRDVEELKKFAKAAFDLDTILTTANELKYTRAIQTRLAEWMHHPNEEFVKLVSADLVGNRRFTPAIRDKFTSITRRAFDQLISERINERLKGAMAPEAISIGEHPVTVVADQPATTTSPLIADSLIVTTPEEIEGFHIIRAIVREVIPGKRVFMRDAQTYCAILLDDNNRKPICRLRFNNLQKLRLGIFNQDKEEEQLDISSIDDIYSFADRIKATVNAYLPQEV
SIO_010081: PD885_RS00465
subclass of: SO_0000673
so part of: PD885_RS00465
location: complement(102759..103862)
location: region:102759-103862:-1
so has part: feature:102759-103862:-1:exon

WP_088057088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102759-103862:-1:exon

PD885_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00470
pseudo: true
so part of: sequence
location: <104061..104261
location: region:104061-104261:1
so has part: feature:104061-104261:1:exon
subclass of: SO_0000010

61892568
type: Gene
SIO_000068: ncbigene

position:104061:1
position: 104061
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:104261:1
position: 104261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104061-104261:1:exon

PD885_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007635327.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: PD885_RS00470
subclass of: SO_0000673
so part of: PD885_RS00470
location: <104061..104261
location: region:104061-104261:1
so has part: feature:104061-104261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104061-104261:1:exon

PD885_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00475
old locus tag: PD885_00088
pseudo: true
so part of: sequence
location: 104498..105867
location: region:104498-105867:1
so has part: feature:104498-105867:1:exon
subclass of: SO_0000010

61892569
type: Gene
SIO_000068: ncbigene

position:104498:1
position: 104498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105867:1
position: 105867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104498-105867:1:exon

PD885_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00475
old locus tag: PD885_00088
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035783.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: PD885_RS00475
subclass of: SO_0000673
so part of: PD885_RS00475
location: 104498..105867
location: region:104498-105867:1
so has part: feature:104498-105867:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104498-105867:1:exon

PD885_RS21795
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21795
pseudo: true
so part of: sequence
location: complement(<105889..106037)
location: region:105889-106037:-1
so has part: feature:105889-106037:-1:exon
subclass of: SO_0000010

69055287
type: Gene
SIO_000068: ncbigene

position:105889:-1
position: 105889
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:106037:-1
position: 106037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105889-106037:-1:exon

PD885_RS21795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010374516.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: PD885_RS21795
subclass of: SO_0000673
so part of: PD885_RS21795
location: complement(<105889..106037)
location: region:105889-106037:-1
so has part: feature:105889-106037:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:105889-106037:-1:exon

PD885_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00485
pseudo: true
so part of: sequence
location: complement(106204..108822)
location: region:106204-108822:-1
so has part: feature:106204-108822:-1:exon
subclass of: SO_0000010

61892571
type: Gene
SIO_000068: ncbigene

position:106204:-1
position: 106204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108822:-1
position: 108822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106204-108822:-1:exon

PD885_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017159663.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycoside hydrolase family 3 C-terminal domain-containing protein
SIO_010081: PD885_RS00485
subclass of: SO_0000673
so part of: PD885_RS00485
location: complement(106204..108822)
location: region:106204-108822:-1
so has part: feature:106204-108822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106204-108822:-1:exon

PD885_RS21800
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21800
old locus tag: PD885_00094
pseudo: true
so part of: sequence
location: complement(<109017..109336)
location: region:109017-109336:-1
so has part: feature:109017-109336:-1:exon
subclass of: SO_0000010

69055288
type: Gene
SIO_000068: ncbigene

position:109017:-1
position: 109017
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:109336:-1
position: 109336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109017-109336:-1:exon

PD885_RS21800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21800
old locus tag: PD885_00094
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017171721.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: PD885_RS21800
subclass of: SO_0000673
so part of: PD885_RS21800
location: complement(<109017..109336)
location: region:109017-109336:-1
so has part: feature:109017-109336:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109017-109336:-1:exon

PD885_RS22370
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS22370
so part of: sequence
location: complement(109479..109604)
location: region:109479-109604:-1
so has part: feature:109479-109604:-1:exon
subclass of: SO_0000010

79411893
type: Gene
SIO_000068: ncbigene

position:109479:-1
position: 109479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109604:-1
position: 109604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109479-109604:-1:exon

PD885_RS22370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS22370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTRETVIGDTFASAATSSMVVARLVRRTDFLTFSKRGLFK
SIO_010081: PD885_RS22370
subclass of: SO_0000673
so part of: PD885_RS22370
location: complement(109479..109604)
location: region:109479-109604:-1
so has part: feature:109479-109604:-1:exon

WP_257784599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109479-109604:-1:exon

PD885_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00495
old locus tag: PD885_00095
so part of: sequence
location: 109546..110571
location: region:109546-110571:1
so has part: feature:109546-110571:1:exon
subclass of: SO_0000010

61892572
type: Gene
SIO_000068: ncbigene

position:109546:1
position: 109546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110571:1
position: 110571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109546-110571:1:exon

PD885_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00495
old locus tag: PD885_00095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006450751.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LacI family DNA-binding transcriptional regulator
translation: MDEVAALAKVSPMTVSRVVNNNRSVRDATRERVRRAVDKLGYTPNLAASALAAAQSTRIALIYSDPRGAYLRELLLGVLRVVSGTSIQLVIDCWDDLDADAERKAARKLAKGVAGAILPPPLCESKAVVLALVRAKVPVVAIASNHFLPDVACVRIDEFAAAKEITEHLIAQGHTRIGYIAGNPNLSASTRRFEGFQAALADAGLRLDRHLVKPGDYTYKSGLIAAEKLLARKRRPSAIFASNDDMAAATISVAHRRGLDVPRDLSVVGFDDTSAATAVWPELTTVQQPIATMADAALDIVLKTIRAKERTAKMVDHVVPHLLVKRDSVTAPAASETTESP
SIO_010081: PD885_RS00495
subclass of: SO_0000673
so part of: PD885_RS00495
location: 109546..110571
location: region:109546-110571:1
so has part: feature:109546-110571:1:exon

WP_231892766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109546-110571:1:exon

PD885_RS21805
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21805
pseudo: true
so part of: sequence
location: complement(110654..>110801)
location: region:110654-110801:-1
so has part: feature:110654-110801:-1:exon
subclass of: SO_0000010

69055289
type: Gene
SIO_000068: ncbigene

position:110654:-1
position: 110654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110801:-1
position: 110801
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110654-110801:-1:exon

PD885_RS21805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017171248.1
note: catalyzes the interconversion of D-xylose to D-xylulose; frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: xylose isomerase
SIO_010081: PD885_RS21805
subclass of: SO_0000673
so part of: PD885_RS21805
location: complement(110654..>110801)
location: region:110654-110801:-1
so has part: feature:110654-110801:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110654-110801:-1:exon

PD885_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: ttcA
locus tag: PD885_RS00505
old locus tag: PD885_00096
so part of: sequence
location: 110936..111847
location: region:110936-111847:1
so has part: feature:110936-111847:1:exon
subclass of: SO_0000010

61892573
type: Gene
SIO_000068: ncbigene

position:110936:1
position: 110936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111847:1
position: 111847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110936-111847:1:exon

PD885_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: ttcA
locus tag: PD885_RS00505
old locus tag: PD885_00096
EC number: 2.8.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010374500.1
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA 2-thiocytidine(32) synthetase TtcA
translation: MTAALPLPHPLTDPAPRDPRQRLPPEQLRLAKRLQRQVGQAIADFGMIAAGDKIMVCLSGGKDSYTMLDMLLQLQRKAPVPFTLVAVNLDQKQPDFPAHVLPSYLRNLGVPFDIVEQDTYSVVSRVIPAGKTMCSLCSRLRRGALYAYAQAHGVTKIALGHHRDDIVATFFMNLFHHARLAAMAPKLHSDDRQHVVIRPLAYVREADIADYAQARQFPIIPCNLCGSQENLQRQQVGRMLQQWDREQPGRVDQIARALGDVRPAQMADRTLFDFWSLGRSDAAAAGPDSNAWLAASDTPHDSD
SIO_010081: PD885_RS00505
subclass of: SO_0000673
so part of: PD885_RS00505
location: 110936..111847
location: region:110936-111847:1
so has part: feature:110936-111847:1:exon

WP_002803793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110936-111847:1:exon

PD885_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00510
old locus tag: PD885_00097
so part of: sequence
location: 111911..112816
location: region:111911-112816:1
so has part: feature:111911-112816:1:exon
subclass of: SO_0000010

61892574
type: Gene
SIO_000068: ncbigene

position:111911:1
position: 111911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112816:1
position: 112816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111911-112816:1:exon

PD885_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00510
old locus tag: PD885_00097
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154674.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombination-associated protein RdgC
translation: MFFRNLTLFRFPTTLDFSEIDTLLPQVQLKPVGPLEISSRGFISPFGRDEQEVLSHRLEDFLWLTVGSEDKILPGAVVNDLLERKVAEIEEKEGRRPGGKARKRLKDDLIHELLPRAFVKSSRTDAILDLQHGYIAVNTSSRKSGENVMSEIRGALGSFPALPLNAEVAPRAVLTGWIAGEPLPEGLSLGEECEMKDPIEGGAVVKCQHQELRGDEIDKHLEAGKQVTKLALVLDDNLSFVLGDDLVIRKLKFLDGALDQLEHSDDEGARAELDARFALMSAEVRRLFLLLETALKLSKAE
SIO_010081: PD885_RS00510
subclass of: SO_0000673
so part of: PD885_RS00510
location: 111911..112816
location: region:111911-112816:1
so has part: feature:111911-112816:1:exon

WP_002803791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111911-112816:1:exon

PD885_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00515
old locus tag: PD885_00098
so part of: sequence
location: 113090..113875
location: region:113090-113875:1
so has part: feature:113090-113875:1:exon
subclass of: SO_0000010

61892575
type: Gene
SIO_000068: ncbigene

position:113090:1
position: 113090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113875:1
position: 113875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113090-113875:1:exon

PD885_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00515
old locus tag: PD885_00098
EC number: 3.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010374496.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SprT family zinc-dependent metalloprotease
translation: MFKPARRLIAPTPQVVERDCVRLQLDGREIAVLRVRDPRARRIKLSVDERGARLTLPIRASLVSGERFLLAHLEWLSTQLSRYQQVDAFPALDRGVPGQLPLRGVLLPLSWHEGRYARIEITDDGAQFQVPARLGDSGVRRTLKEFYEAQARADVGRWLPRYLPGLPRAPTRLRLKVMSSQWGSLAPDGSMALDLALVLGRSSAFEYVLVHELCHLVQANHSPAFWAEVEQRFPAWRDERSYFHEHGRQLKAQLRRLLQAE
SIO_010081: PD885_RS00515
subclass of: SO_0000673
so part of: PD885_RS00515
location: 113090..113875
location: region:113090-113875:1
so has part: feature:113090-113875:1:exon

WP_040762214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113090-113875:1:exon

PD885_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00520
old locus tag: PD885_00099
so part of: sequence
location: complement(113948..114814)
location: region:113948-114814:-1
so has part: feature:113948-114814:-1:exon
subclass of: SO_0000010

61892576
type: Gene
SIO_000068: ncbigene

position:113948:-1
position: 113948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114814:-1
position: 114814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113948-114814:-1:exon

PD885_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00520
old locus tag: PD885_00099
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006449083.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MEPYACGLDIGRITGLRNHERGPRRVLALHGWLDNAASFLPLSAHLHAHDLDLVLLDLPGHGHSAWLPTGAEYTLSNTIGILLQVADDLGWQRFSVLGHSLGGGVASLLAAAAPERVDALIAIEALGALAEPVESTATRLRNAVASARTLTQRPLRVFPSMEMLVRARMMANQLTEPAARLLVERGMRVVEGGYSWCSDPRLTLPTAIRMTEAQIDVLLACVACPTQAIFATPAQVYFPDALRDHRVALMRDARLHLMPGTHHMHMEAPEAVAAVINGFLAELSPPRG
SIO_010081: PD885_RS00520
subclass of: SO_0000673
so part of: PD885_RS00520
location: complement(113948..114814)
location: region:113948-114814:-1
so has part: feature:113948-114814:-1:exon

WP_040762195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113948-114814:-1:exon

PD885_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: hemH
locus tag: PD885_RS00525
old locus tag: PD885_00100
so part of: sequence
location: complement(114817..115782)
location: region:114817-115782:-1
so has part: feature:114817-115782:-1:exon
subclass of: SO_0000010

61892577
type: Gene
SIO_000068: ncbigene

position:114817:-1
position: 114817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115782:-1
position: 115782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114817-115782:-1:exon

PD885_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: hemH
locus tag: PD885_RS00525
old locus tag: PD885_00100
EC number: 4.98.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505180.1
GO function: GO:0004325 - ferrochelatase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferrochelatase
translation: MVHMNTTPDTALLVVNLGTPESPTAPAVRRYLSEFLSDRRVVAIPPLFWKPLLYGVILPIRGPKSAEKYAKVWLPDGSPLAVYTRRLAEGLKEVMADWHVEWAMRYGAPALRKTLDALRARGIKRIVVLPLYPQYSTTTTASIQDVVDAWRPSAPEIAVEVIQEYCEDAGWVAAIADSIRAHWQTHGRSEKLMFSFHGLPQRVANAGDPYPQQCERSAQAIVAALGLGADEWQMGYQSRFGAERWLQPYAEPTLWKLAEGGVRSFDLICPGFATDCLETLEEVALGFAETLAERGAALSYIPCLNASDAHARALAAVARRA
SIO_010081: PD885_RS00525
subclass of: SO_0000673
so part of: PD885_RS00525
location: complement(114817..115782)
location: region:114817-115782:-1
so has part: feature:114817-115782:-1:exon

WP_002803784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114817-115782:-1:exon

PD885_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00530
old locus tag: PD885_00101
so part of: sequence
location: 115937..116821
location: region:115937-116821:1
so has part: feature:115937-116821:1:exon
subclass of: SO_0000010

61892578
type: Gene
SIO_000068: ncbigene

position:115937:1
position: 115937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116821:1
position: 116821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115937-116821:1:exon

PD885_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00530
old locus tag: PD885_00101
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154679.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YSC84-related protein
translation: MTRLSRLALLLSLTFAAGYAVAGPEEDQRARNAVRVLNEIMKIPEQAIPDKLLDEARAIVVIPDTLKAGLVIGGRRGHGLMSMKNADGSWSQPVFVKLTGGSIGFQAGVQSSDVVLVFRNDRSLDNIVNGKFTLGADAGVAAGPVGRNAAAATDGQLKAEIWSWSRARGLFAGVALDGAVLQIDDAADLNAYGGGATPRMIFEGRTNERPSTDVIAFRDRLEEATYTARANRGSNGGAIEPRPAPPPQTPTTPPAPVNEASTVPMQPSTKPPSQQGFQPVSEGEIRSESLDGNR
SIO_010081: PD885_RS00530
subclass of: SO_0000673
so part of: PD885_RS00530
location: 115937..116821
location: region:115937-116821:1
so has part: feature:115937-116821:1:exon

WP_162597093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115937-116821:1:exon

PD885_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: tatA
locus tag: PD885_RS00535
old locus tag: PD885_00102
so part of: sequence
location: 116895..117122
location: region:116895-117122:1
so has part: feature:116895-117122:1:exon
subclass of: SO_0000010

61892579
type: Gene
SIO_000068: ncbigene

position:116895:1
position: 116895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117122:1
position: 117122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116895-117122:1:exon

PD885_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: tatA
locus tag: PD885_RS00535
old locus tag: PD885_00102
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006449086.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0043953 - protein transport by the Tat complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Sec-independent protein translocase subunit TatA
translation: MGSFSIWHWLIVLVIVLLVFGTKRLTSGAKDLGSAVKEFKKGMHDDDKPAGKLGDDSRIAEQAREAQAERDRDAR
SIO_010081: PD885_RS00535
subclass of: SO_0000673
so part of: PD885_RS00535
location: 116895..117122
location: region:116895-117122:1
so has part: feature:116895-117122:1:exon

WP_002803779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116895-117122:1:exon

PD885_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: tatB
locus tag: PD885_RS00540
old locus tag: PD885_00103
so part of: sequence
location: 117138..117749
location: region:117138-117749:1
so has part: feature:117138-117749:1:exon
subclass of: SO_0000010

61892580
type: Gene
SIO_000068: ncbigene

position:117138:1
position: 117138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117749:1
position: 117749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117138-117749:1:exon

PD885_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: tatB
locus tag: PD885_RS00540
old locus tag: PD885_00103
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011349077.1
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Sec-independent protein translocase protein TatB
translation: MFDIGVGELTLIAVVALVVLGPERLPKAARFAGLWVRRARAQWDSVKQELERELEAEELKRSLQDVQASLREAEDQLRNKQQQVEQGARALHDDVGRDIDIRSSATPVATPLELAHADLSAGSTAESALDASAPAGPATAAPVIAQAQPIAPSPHQTLVPAPHDTAVPAPHAAHTTNAHAAPINAASTPTVPTEPTKIQEKHP
SIO_010081: PD885_RS00540
subclass of: SO_0000673
so part of: PD885_RS00540
location: 117138..117749
location: region:117138-117749:1
so has part: feature:117138-117749:1:exon

WP_002803767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117138-117749:1:exon

PD885_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: tatC
locus tag: PD885_RS00545
old locus tag: PD885_00104
so part of: sequence
location: 117746..118483
location: region:117746-118483:1
so has part: feature:117746-118483:1:exon
subclass of: SO_0000010

61892581
type: Gene
SIO_000068: ncbigene

position:117746:1
position: 117746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118483:1
position: 118483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117746-118483:1:exon

PD885_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: tatC
locus tag: PD885_RS00545
old locus tag: PD885_00104
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005997625.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: twin-arginine translocase subunit TatC
translation: MSLFDDAQAESSLIEHLVELRARLMRALIGLGVVLLALLPFSRALYSWLAAPLISQLPLGQTMIAMNPAGAFFAPLKLTFFVAVFFSVPWLLYQAWAFVAPGLYQREKKLAFPLLASAVALFYIGCAFAYFLVLPAVFHFLTTFKPDVIAMTPDANSYLDFVLAIFFAFGASFELPVALVILVLLGWVTPKQLSEGRGYAVVGIFILAAVLTPPDVVSQLMLAIPMCLLYELGIIASRAVGPKAD
SIO_010081: PD885_RS00545
subclass of: SO_0000673
so part of: PD885_RS00545
location: 117746..118483
location: region:117746-118483:1
so has part: feature:117746-118483:1:exon

WP_002803765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117746-118483:1:exon

PD885_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00550
old locus tag: PD885_00105
so part of: sequence
location: complement(118807..119706)
location: region:118807-119706:-1
so has part: feature:118807-119706:-1:exon
subclass of: SO_0000010

61892582
type: Gene
SIO_000068: ncbigene

position:118807:-1
position: 118807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119706:-1
position: 119706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118807-119706:-1:exon

PD885_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00550
old locus tag: PD885_00105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154682.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BPSS1780 family membrane protein
translation: MSEIRKVPASAGAEWLLTGFSLLKRAPLALGSLGVIWSVAASLVVSLSVLVPLLGPALQLLLVLAGPLFMGGLLWAIREVDEGRVAKPSHLLHGLQDGRAPHLLVSLLPQLIAGLLLGVLLLVMIGATGLQQLSEVMVKINQISQSGAQPDPAQIEQLAAGLPAGRILLWLLLTIATFAAMTLALFVMPPQVMFNRSTGGHALRASLRASLHNLPAMLVFFVLAFIAIFAIYFAVMIVALIIGLVAGQTVAMWLAQLLLMAVLMPVFAGSVYAAWKQMFSHEGAVAQPAPPSRPDVFAA
SIO_010081: PD885_RS00550
subclass of: SO_0000673
so part of: PD885_RS00550
location: complement(118807..119706)
location: region:118807-119706:-1
so has part: feature:118807-119706:-1:exon

WP_002803762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118807-119706:-1:exon

PD885_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00555
old locus tag: PD885_00106
so part of: sequence
location: complement(119752..120516)
location: region:119752-120516:-1
so has part: feature:119752-120516:-1:exon
subclass of: SO_0000010

61892583
type: Gene
SIO_000068: ncbigene

position:119752:-1
position: 119752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120516:-1
position: 120516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119752-120516:-1:exon

PD885_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00555
old locus tag: PD885_00106
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011039158.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine amidotransferase
translation: MSALPFLIIETGQPVPAVKRYGRFPHWIRVAAGLAEHETVAIDVANGDRLPDHDGFAGTIVSGSAAFVTDRADWSERSAEWLRDAAHEGMPLLGICYGHQLLAHALGGEVDYNPAGRESGTIALELHPPAEQDPLFAGLPAHFPAHATHLQTVVRAPEGAIVLAHSRQDRCHAFRWGRATWGVQFHPEFATHHMRGYVQARAECIARHGLCARKLAQEVTAAPVARKLLRRFVHHARGLQTVNADPAAHTQKQR
SIO_010081: PD885_RS00555
subclass of: SO_0000673
so part of: PD885_RS00555
location: complement(119752..120516)
location: region:119752-120516:-1
so has part: feature:119752-120516:-1:exon

WP_002803761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119752-120516:-1:exon

PD885_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00560
old locus tag: PD885_00107
so part of: sequence
location: complement(121123..122937)
location: region:121123-122937:-1
so has part: feature:121123-122937:-1:exon
subclass of: SO_0000010

61892584
type: Gene
SIO_000068: ncbigene

position:121123:-1
position: 121123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122937:-1
position: 122937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121123-122937:-1:exon

PD885_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00560
old locus tag: PD885_00107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002803759.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GspE/PulE family protein
translation: MEQRRTADPDSAATILPRGRLMFDPVAAALLADGMVVPHEHERVQFSAAGVRNASEVHPLVLLANLKLHAAQPPAGELGLERLTEWLATRTGLRYLRIDPTRIDVAAVTGVVSHAYARRHRILPLALDAERVLIATSEPLALEWLADVQHLSRRRIELALINPLDLHRYTMEFFGVTQSVRGARGDVRSAEPEAGLPSFEQLVELGRASDVNADDHHIVHIVDWLLQYAYEQRASDIHLEPRREAGRMRFRIDGMLHKVLEVPPSVMTAVVSRIKVLGRMDLAERRRPQDGRIKTRSPGGREVEMRLSTMPTAFGEKCVMRIFDPDSAFKSIEQLGFSGEEAAGWSALVERPHGIVLVTGPTGSGKTTTLYSTLKRLATPDVNVCSVEDPIEMIAPEFNQMQVQQNIDLDFASGVRTLLRQDPDIIMIGEIRDLETAQMAVQASLTGHLVLSTLHTNDAASAITRLLDLGVPHYLVASTLNGVLAQRLVRTLCVHCKRPHALSDDDWSAIREPGEALPEVLNVHAPVGCLECRRTGYLGRVGLYELLPVTPRLRSLIRADTDLASFSHVARGEGLRTLRRTGLEKVAAGLTTIEEVLSVLPPRE
SIO_010081: PD885_RS00560
subclass of: SO_0000673
so part of: PD885_RS00560
location: complement(121123..122937)
location: region:121123-122937:-1
so has part: feature:121123-122937:-1:exon

WP_088056604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121123-122937:-1:exon

PD885_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: glyQ
locus tag: PD885_RS00565
old locus tag: PD885_00108
so part of: sequence
location: 123028..123936
location: region:123028-123936:1
so has part: feature:123028-123936:1:exon
subclass of: SO_0000010

61892585
type: Gene
SIO_000068: ncbigene

position:123028:1
position: 123028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123936:1
position: 123936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123028-123936:1:exon

PD885_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: glyQ
locus tag: PD885_RS00565
old locus tag: PD885_00108
EC number: 6.1.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017156064.1
GO component: GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase subunit alpha
translation: MSDFRRVPITFQGLIQTLNQYWAEQGCVLIQPLDLEVGAGTFHPATFLRALGPEPWNAAYVQPSRRPTDGRYGENPNRLQRYYQYQVAMKPNPDNIQDLYLGSLQALGIDPLVHDLRFVEDNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQAGGLECKPVLGEITYGLERLCMYLQSCENVYGLVWTYGPDGTPVSYGDVYHQNEVEQSAYNFEHANVPELLHRFDACEAEARHLVEVGLPLPAYEQVTKASHAFNLLDARRAISVTERQRYILRVRALAQGVAQAYYAQREKLGFPGVKR
SIO_010081: PD885_RS00565
subclass of: SO_0000673
so part of: PD885_RS00565
location: 123028..123936
location: region:123028-123936:1
so has part: feature:123028-123936:1:exon

WP_088056605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123028-123936:1:exon

PD885_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: glyS
locus tag: PD885_RS00570
old locus tag: PD885_00109
so part of: sequence
location: 124124..126364
location: region:124124-126364:1
so has part: feature:124124-126364:1:exon
subclass of: SO_0000010

61892586
type: Gene
SIO_000068: ncbigene

position:124124:1
position: 124124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126364:1
position: 126364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124124-126364:1:exon

PD885_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: glyS
locus tag: PD885_RS00570
old locus tag: PD885_00109
EC number: 6.1.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409707.1
GO component: GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase subunit beta
translation: MSEQLPLLIELGTEELPVKALPGLAQAFFDGVLSGLEKRGVAVTHGDAKPLSTPRRLAVLLPGVATEQPEQRSEVMGPYLNIALDAGGQPTRALAGFAAKAGIDWTALERTSDAKGERFVHRAVTPGARTADLLPEILHEAIAAMPIPKPMRWGAHEYTFARPVQWLVLLFGDAVIPAELLGVRGDRITRGHRFMHQGEVSLAAPGDYVDALRAAHVLVDADARRARIVDEVEAAARQAGGRARISDDNLEQVVNLVEWPLAVLCSFERDFLAVPQEALIETMEINQKFFPVLDDSGTLTEQFIGIANIASKDVAEVAKGYERVIRPRFADAKFFFDEDLKQGLDAMGAGLGSVTYQAKLGTVADKVARVAALARLIAPQVGADAEQAARAAQLAKNDLQSRMVNEFPELQGVAGRHYAKAAGEPNEISLAIDEAYQPRFAGDDIALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFELDLEQLLVEARHQINLQASARQLLKTQTAIHNAKDAGTALPQSVQKQAHTVLAQSAQDGEIFDFILERLRGYYADKDVPATHFNAVAALFSVAPEGAPTTQGGATQLGATPASLYDFDRRIAAIGIFAKLPEAEALAAANKRIRNILRKVGGEIHGDIDTSLLREPAEEALAEAVEAAIGDTGDALHRHDYVAVLARLARLRPQVDAFFDGVMVNAEDAQLRANRLALLKKLGDRLGSVAAIEHLSS
SIO_010081: PD885_RS00570
subclass of: SO_0000673
so part of: PD885_RS00570
location: 124124..126364
location: region:124124-126364:1
so has part: feature:124124-126364:1:exon

WP_002803755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124124-126364:1:exon

PD885_RS20260
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS20260
pseudo: true
so part of: sequence
location: complement(<126392..>126514)
location: region:126392-126514:-1
so has part: feature:126392-126514:-1:exon
subclass of: SO_0000010

61896309
type: Gene
SIO_000068: ncbigene

position:126392:-1
position: 126392
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:126514:-1
position: 126514
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126392-126514:-1:exon

PD885_RS20260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS20260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011711660.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: PD885_RS20260
subclass of: SO_0000673
so part of: PD885_RS20260
location: complement(<126392..>126514)
location: region:126392-126514:-1
so has part: feature:126392-126514:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126392-126514:-1:exon

PD885_RS20265
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS20265
pseudo: true
so part of: sequence
location: complement(<126699..126976)
location: region:126699-126976:-1
so has part: feature:126699-126976:-1:exon
subclass of: SO_0000010

61896310
type: Gene
SIO_000068: ncbigene

position:126699:-1
position: 126699
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:126976:-1
position: 126976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126699-126976:-1:exon

PD885_RS20265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS20265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011037261.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: PD885_RS20265
subclass of: SO_0000673
so part of: PD885_RS20265
location: complement(<126699..126976)
location: region:126699-126976:-1
so has part: feature:126699-126976:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126699-126976:-1:exon

PD885_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00580
old locus tag: PD885_00110
so part of: sequence
location: 127638..128018
location: region:127638-128018:1
so has part: feature:127638-128018:1:exon
subclass of: SO_0000010

61892587
type: Gene
SIO_000068: ncbigene

position:127638:1
position: 127638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128018:1
position: 128018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127638-128018:1:exon

PD885_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00580
old locus tag: PD885_00110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017159672.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: I78 family peptidase inhibitor
translation: MRSVLPTTCLACTLIVLAALTACGKPQLDEQEAVSAKAQQAAEQASAPAPAAAPEPPPIGSCDATQVQSLVGQALTDAVSEQARSDAGAKSVRVLKPGQMVSMEFNGERLNLEVDAKNVIASVRCG
SIO_010081: PD885_RS00580
subclass of: SO_0000673
so part of: PD885_RS00580
location: 127638..128018
location: region:127638-128018:1
so has part: feature:127638-128018:1:exon

WP_002803751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127638-128018:1:exon

PD885_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: gltB
locus tag: PD885_RS00585
old locus tag: PD885_00111
so part of: sequence
location: 128221..132693
location: region:128221-132693:1
so has part: feature:128221-132693:1:exon
subclass of: SO_0000010

61892588
type: Gene
SIO_000068: ncbigene

position:128221:1
position: 128221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132693:1
position: 132693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128221-132693:1:exon

PD885_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: gltB
locus tag: PD885_RS00585
old locus tag: PD885_00111
EC number: 1.4.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019237055.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate synthase large subunit
translation: MAPRTRQGLDNDALYNSARDERDACGFGMVAQLDDQPSRSLVDTAIAALSRMTHRGGVAADGLTGDGCGLLIRKPDAFLRGLARDAGITLGTRYAAGVVFLPLDEGDAARCRAELETQLHTAGVQFCGWRVVPTDHSVCGQLARDTLPRIEQVFVDAGAQQTEDSFTLALFLARRRAEQALLGMDNFYVTTLSPNGISYKGMVLPDKLSTFYPDLQRSDLSSSAIVFHQRFSTNTLPRWPLAHPFRLLAHNGEINTIEGNRRWAQARSKVWRTPRFDIAEFDPVISMHGSDSQSLDNMLELLIAGGMDLLQALRILVPPATQSLEFKDADLAAFYEFYGLNTEPWDGPAGIVACDSRYAACMLDRNGLRPARWMLTSDRHFLVASEAGVWELPAERITRKGKLGPGEMMAIDLKRGDLLDSDAIDRINRARAPYKQWLQQGVTYLQTELIDPSLVEEPFSEQTLRSYQKLFQLSTEEVEQVLRPLAETEQEATGSMGDDTPMAVLSRQTRPLYDYFRQAFAQVTNPPIDPLREGIAMSLTTQLGKETNIFHAGAETVNHVILNSPVLSQRKLRQLLKMEQYVERNRLIDLSYSVEEGLKAGLERICHEVEAAARAGAVMLLLSDRYPVPDRPMAHALLATGAVHHHLCKVGLRCDVNLIIETGTARDPHHMACLLGFGATAVYPYLAYQTLFDLGRRGILQLSKGGEQSQIGRRYRKGIYKGLSKIISKMGICTIASYRGAQLFEIVGLDPDAVELCFADTPARIGGVDLVRLDTEARELTARAWNDQLKPEVGGLLKYVHGGEYHMYNPDVVMTLQRATRTGDAGDWQKYVDAVHSRPASTLRDLVQLKRADTPTPLAEVAPAEDLLRRFDTAAISLGALSPEAHEALAIAMNRLGGRSNSGEGGEDPARYGTEKRSKIKQVASGRFGVTPEYLVNAEVLQIKVAQGAKPGEGGQLPGHKVNELIARLRYAKPGIGLISPPPHHDIYSIEDLAQLIYDLKQVNPTALVSVKLVAHAGVGTIAAGVVKAGADLITVSGHDGGTGASPVSSIRYAGVPWELGVAESHQALVANDLRDRTILQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRICHLNNCATGVATQDERLRASYFTGLPERVEHFFRLLAEEVRQWLSYLGVRSLDDIVGRTDLLEQLEVSPRAGVKVDLSRLLTYAPYGGSHCAAQRLYDSPDSLATQMDVLLANAIANKTGGDHRFLIHNTDRSIGARLSGAIARVHGNHGMSDAPLNLRFRGTAGQSFGAFNAGGLQLELEGEANDYVGKGMAGGRLVVRPPRGARFEARSTPIVGNTCLYGATGGELFAAGRAGERFAVRNSGALAVVEGAGDHCCEYMTDGVVLVLGKVGLNFGAGFTGGLAYVLDIERDFVDRYNHELIDIHRVSSEGFENHRQHLHTLITRHRELTGSIWAQQVLDEFRDYIGKFWLVKPKAASIESLTESLRRAA
SIO_010081: PD885_RS00585
subclass of: SO_0000673
so part of: PD885_RS00585
location: 128221..132693
location: region:128221-132693:1
so has part: feature:128221-132693:1:exon

WP_002803743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128221-132693:1:exon

PD885_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00590
old locus tag: PD885_00112
so part of: sequence
location: 132821..134302
location: region:132821-134302:1
so has part: feature:132821-134302:1:exon
subclass of: SO_0000010

61892589
type: Gene
SIO_000068: ncbigene

position:132821:1
position: 132821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134302:1
position: 134302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132821-134302:1:exon

PD885_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00590
old locus tag: PD885_00112
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005912482.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MSRKQAFQFLDLPRIMPARIPLELRTSGDWGELYGKFDKADAQYQSGRCLDCGNPYCSWKCPVHNAIPQWLQLVQENRIEEAAALCHSTNPLPEVCGRVCPQDRLCEGSCTLEEFGAVTIGAVEKYIVDTAFKMGWRPDLGNVQPTGWRVAVIGAGPAGLACADRLVRAGIEAVVYDRYEQIGGLLQFGIPSFKLDKSVIGKRREILEGMGVQFRLGVEIGKDVSIEQLLGEFDAVFLGTGAYRYTDGGLPGQDLKNVLPALPFLVQNSRIVSGNDPHGRPIAGWEDQLALPDLNGKHVVVLGGGDTGMDCVRSAIRLGAAKVTCAYRRDEASMPGSAREVANAREEGVRFLFNRQPLSIESGADDEAVGVTVVETRLGEPDASGRRNAVPVEGSESLLEADVVIIAFGFSPTLPDWLAAQGVDAGSNGRIVAPTNGDGRLPYQTSNPRLFAGGDCVRGADLVVTAVAEGRDAAGSIVQLLGVKAQVKEPASA
SIO_010081: PD885_RS00590
subclass of: SO_0000673
so part of: PD885_RS00590
location: 132821..134302
location: region:132821-134302:1
so has part: feature:132821-134302:1:exon

WP_002803742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132821-134302:1:exon

PD885_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00595
old locus tag: PD885_00113
so part of: sequence
location: complement(134433..135491)
location: region:134433-135491:-1
so has part: feature:134433-135491:-1:exon
subclass of: SO_0000010

61892590
type: Gene
SIO_000068: ncbigene

position:134433:-1
position: 134433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135491:-1
position: 135491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134433-135491:-1:exon

PD885_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00595
old locus tag: PD885_00113
EC number: 1.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016851500.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent alcohol dehydrogenase
translation: MSKAYAYAAQIADQPLAPFVFERRQPGPNDVQIDIAYCGVCHSDLHTARNEWHNTLYPSVPGHEIVGRVTAVGDAVTGFKVGDLAGVGCMVDSCRSCASCEEGEEQYCEQGFTGTYNGPMFGGGENTYGGYSDHIVVDQKYVLHISHTDNLAAVAPLLCAGITTYSPLAHWKVGPGQKVGVVGLGGLGHMAVKIAKAMGATVVLFTTSEGKRADALRLGASEVVVSKDEAQMAAQANTLDFILNTVAAPHNLDPFLNALKHDGAMVLVGVPEHAHPSPSVFNLIMKRRTLAGSLIGGIRQTQEMLDFCAKHNIVSDIETIRADQINEAYERMLKSDVKYRFVIDMATLDKAA
SIO_010081: PD885_RS00595
subclass of: SO_0000673
so part of: PD885_RS00595
location: complement(134433..135491)
location: region:134433-135491:-1
so has part: feature:134433-135491:-1:exon

WP_002803740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134433-135491:-1:exon

PD885_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00605
old locus tag: PD885_00114
so part of: sequence
location: 135800..136873
location: region:135800-136873:1
so has part: feature:135800-136873:1:exon
subclass of: SO_0000010

61892591
type: Gene
SIO_000068: ncbigene

position:135800:1
position: 135800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136873:1
position: 136873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135800-136873:1:exon

PD885_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00605
old locus tag: PD885_00114
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345792.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 5 protein
translation: MFRSPPKFPRLRGAALALTLLATLPLAHAKKPVDAKKESAGLKYVGVSLSGAEFNSRKKPGTLYKDYTYPAASDFSYFAAKGINTIRLPFLWERVQPELNGNLDPAQLGLIKKSLQAAKANKQYLILDLHNYAKYNGQRIGASEVPAAAVADLWRRLALEFKDDKAVIFGLMNEPNGISAPDWASVAQGAINSIRKTGAKNLILVPGTAYTGAHSWRSTNYGVSNAKALEIVKDPGNNLAFEAHQYLDSDYSGTKPVCTSATVGEEKLRGFTAWLRENKQKGFLGEFGTANNPVCNQALEGMLTYMEKNSDVWLGWTWWAAGAWWKPDYPFTVQPGKDGSDKPQMSILSKYARRAGK
SIO_010081: PD885_RS00605
subclass of: SO_0000673
so part of: PD885_RS00605
location: 135800..136873
location: region:135800-136873:1
so has part: feature:135800-136873:1:exon

WP_002803737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135800-136873:1:exon

PD885_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00610
pseudo: true
so part of: sequence
location: 137016..137718
location: region:137016-137718:1
so has part: feature:137016-137718:1:exon
subclass of: SO_0000010

61892592
type: Gene
SIO_000068: ncbigene

position:137016:1
position: 137016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137718:1
position: 137718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137016-137718:1:exon

PD885_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002802850.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: PD885_RS00610
subclass of: SO_0000673
so part of: PD885_RS00610
location: 137016..137718
location: region:137016-137718:1
so has part: feature:137016-137718:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137016-137718:1:exon

PD885_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00615
old locus tag: PD885_00115
so part of: sequence
location: 137966..139042
location: region:137966-139042:1
so has part: feature:137966-139042:1:exon
subclass of: SO_0000010

61892593
type: Gene
SIO_000068: ncbigene

position:137966:1
position: 137966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139042:1
position: 139042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137966-139042:1:exon

PD885_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00615
old locus tag: PD885_00115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010375107.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 5 protein
translation: MLSITTRTRQLRSRALSLFLLAIVPFTHAQSANVLKYAGVNLSGAENKSSKKNATVNIDYVFPAASDYTYFAGKHMNTIRLPIPWERVQPKAGGELDPAQLALIRQAVANAKAAKMHLILDMHNYSKYYGNTIGSKKVPISTFTDLWRRLAIEFKSDNTVIFGLMNEPCNITPQSWAAAAQASINTIRKTGANNLILVPGALWTGAHSWYSTNAGQSNAVALASIYDPVNHYAIEAHQYMDNDSSGTSVGCVSATIGAERLNNFTKWLRLNKKHGFLGEFGTGNNVKCNGALNSMLKYIESNSDVWLGWTYWAAGAWWNRTYQFNVHPDAQGRDKPQMSILSPRARRITDLNHTPDGD
SIO_010081: PD885_RS00615
subclass of: SO_0000673
so part of: PD885_RS00615
location: 137966..139042
location: region:137966-139042:1
so has part: feature:137966-139042:1:exon

WP_002803735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137966-139042:1:exon

PD885_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00620
old locus tag: PD885_00116
pseudo: true
so part of: sequence
location: 139341..140710
location: region:139341-140710:1
so has part: feature:139341-140710:1:exon
subclass of: SO_0000010

61892594
type: Gene
SIO_000068: ncbigene

position:139341:1
position: 139341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140710:1
position: 140710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139341-140710:1:exon

PD885_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00620
old locus tag: PD885_00116
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035783.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: PD885_RS00620
subclass of: SO_0000673
so part of: PD885_RS00620
location: 139341..140710
location: region:139341-140710:1
so has part: feature:139341-140710:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139341-140710:1:exon

PD885_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00625
so part of: sequence
location: 140897..141702
location: region:140897-141702:1
so has part: feature:140897-141702:1:exon
subclass of: SO_0000010

61892595
type: Gene
SIO_000068: ncbigene

position:140897:1
position: 140897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141702:1
position: 141702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140897-141702:1:exon

PD885_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002802850.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MTRRKEIPIALWKRIEPLIPQVKRSPKGGRPRISDQQALNGIVYVLRTGVPWEDLPMELGYGSGMTCWRRLRDWQAAGVWHRLHQVLLAERRCAQTLDLSRAGLDAASVAFPPGGPYTGPNPTDRGKLGSKRHLIVDRNGIPLAVCVTGANRHDSVVFEELIDALPPIGGKPGRPRRWPDKLHADKAYDIDRCRAFLKQRGIIARIARKGIARNHRLGRHRWVVERTHAWFAGMGKLRIRFERRIDLHLTLLSLACSIICLRLLPGFC
SIO_010081: PD885_RS00625
subclass of: SO_0000673
so part of: PD885_RS00625
location: join(140897..141227,141227..141702)
location: region:140897-141702:1
so has part: feature:140897-141227:1:exon
so has part: feature:141227-141702:1:exon

WP_088056607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140897-141227:1:exon

position:141227:1
position: 141227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141227-141702:1:exon

PD885_RS21810
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21810
pseudo: true
so part of: sequence
location: 142055..>142159
location: region:142055-142159:1
so has part: feature:142055-142159:1:exon
subclass of: SO_0000010

69055290
type: Gene
SIO_000068: ncbigene

position:142055:1
position: 142055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142159:1
position: 142159
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142055-142159:1:exon

PD885_RS21810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002802776.1
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycoside hydrolase family 5 protein
SIO_010081: PD885_RS21810
subclass of: SO_0000673
so part of: PD885_RS21810
location: 142055..>142159
location: region:142055-142159:1
so has part: feature:142055-142159:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142055-142159:1:exon

PD885_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00630
pseudo: true
so part of: sequence
location: complement(142208..>142655)
location: region:142208-142655:-1
so has part: feature:142208-142655:-1:exon
subclass of: SO_0000010

61892596
type: Gene
SIO_000068: ncbigene

position:142208:-1
position: 142208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142655:-1
position: 142655
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142208-142655:-1:exon

PD885_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611813.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS4 family transposase
SIO_010081: PD885_RS00630
subclass of: SO_0000673
so part of: PD885_RS00630
location: complement(142208..>142655)
location: region:142208-142655:-1
so has part: feature:142208-142655:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142208-142655:-1:exon

PD885_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: xopB
locus tag: PD885_RS00635
old locus tag: PD885_00121
so part of: sequence
location: complement(142995..144851)
location: region:142995-144851:-1
so has part: feature:142995-144851:-1:exon
subclass of: SO_0000010

61892597
type: Gene
SIO_000068: ncbigene

position:142995:-1
position: 142995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144851:-1
position: 144851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142995-144851:-1:exon

PD885_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: xopB
locus tag: PD885_RS00635
old locus tag: PD885_00121
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006452638.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XopB/HopD1 family type III secretion system effector
translation: MKTNLARSASMPSPAHAQSHTSNAVDNGASRSDHDIQPGHGGQHQVDDGRLPTSRPPRRRSASRERTIPVGTEHTFESTDRGDLQTQLLTSLAKFCPPSQFPPVHVGSVHRKEGRAVSDHPVVQALLSFVQADQALPSQAASIDRVQLEIRPRRDLEKALGEFKAAFTVETAQLMPGADSSERVSEEINADIHIPLLLKAIERGAAAFGSGALIEAPDGSQISAKAFLASCAPTITSNDDVLAGFVNQKLERDDDLQVRLGAEELLHAATKKQFQLGGLAGSIGVSSILGSAWELGAAEVLKSAVFGKGFSPSKHALQLAGIDSVPPLLIETMDTMCVLAIVKGMKGQDWSMRDLLPKAMKAGAISSVVSFPNNLLQYTGFKSRVGDLAANTATTEAAIFGAASGIPPEVKESEEVMRAGLFQSMKDGVIAHPGEGMGAKEAIEEMTRHALDIAPGESTAVKSMGLASIVGMIPLIASKKATGLLSEKVLRIFRSTVFNPIEAIALNALALGGRVQVPGLFDSDNAKHARVVQTILARASQNMESGTREITAEELHRTLAPRSELLRHVGSAIVSGMNASLEALPALARMLGYGEAPLAERIPYQDVATPDTQHQPAP
SIO_010081: PD885_RS00635
subclass of: SO_0000673
so part of: PD885_RS00635
location: complement(142995..144851)
location: region:142995-144851:-1
so has part: feature:142995-144851:-1:exon

WP_231892695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142995-144851:-1:exon

PD885_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00640
so part of: sequence
location: 145389..145453
location: region:145389-145453:1
so has part: feature:145389-145453:1:exon
subclass of: SO_0000011

61892598
type: Gene
SIO_000068: ncbigene

position:145389:1
position: 145389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145453:1
position: 145453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145389-145453:1:exon

PD885_RS00640
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 48664
nc RNA class: other
locus tag: PD885_RS00640
product: sX9 sRNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02228
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: PD885_RS00640
subclass of: SO_0000673
so part of: PD885_RS00640
location: 145389..145453
location: region:145389-145453:1
so has part: feature:145389-145453:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145389-145453:1:exon

PD885_RS21815
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: xopP
locus tag: PD885_RS21815
old locus tag: PD885_00122
so part of: sequence
location: 146067..148244
location: region:146067-148244:1
so has part: feature:146067-148244:1:exon
subclass of: SO_0000010

69055291
type: Gene
SIO_000068: ncbigene

position:146067:1
position: 146067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148244:1
position: 148244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146067-148244:1:exon

PD885_RS21815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: xopP
locus tag: PD885_RS21815
old locus tag: PD885_00122
inference: COORDINATES: protein motif:HMM:NF041354.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system effector XopP
translation: MHRVGTTKQRSTKLAESVSLAAVPADPAAATSNSVDGSARQSSQLDGLSARPTKPVKPRTAGSSAALPGPSHTASSPASDKQPQSTDPADILQTALRRVEVWSAVLASDDKQCSQPGAAPLLSRERRVELSQNAMKSAREGLQAIADLRLGNRLRSNDAVEHEATLFTILGGSAATAYEARSELIEHKWAHQFRVTQLTESRLDNVTVRVPLHHTDLECQDPDEWYRYLSELEKYRSAMDESLRNMKKPDAHEKIFTTDSFTMKQIRAEHAFCHGTMRSIRCLLVDIYRIRLLRQVEASGSHDVTARLHELYQAKNYLGDTVVDAFTALSKVVTESIRPSEAGAALSPQLVAQHKDVLEDYAEQFGRVGLGLCLDVAALIKGDGDDNIWQSMLDLAQVLTEYRQSVLDLIRSVGPGKREVIAPPAATIEEPPVSRARQKSARRHRKPVNRTAAESSLVPAPPAVPNDTRTLAQQQADIVLKKFPLKRAMVTELDADLIQIANRLGKDTGSVNEMMHCSRQDAMIAFTFVRSSIQGWFEKDQLLQAKAKLPPGDERIAQLSERLELLGMIEQRVQTREADALKSDTQPRAPHLSRLLEMHQVASVTSPTRLRSDNDSGDHGTLFEMRIEHAPLSNGERPAPWFVHLHTAKPVTTNAVPSLDYKEFTAVHLKTAKEKNLGKRWEMLMQALGNNDAKVHRSKIDSALLASLLEVRRGRKSSPEQFPNQ
SIO_010081: PD885_RS21815
subclass of: SO_0000673
so part of: PD885_RS21815
location: 146067..148244
location: region:146067-148244:1
so has part: feature:146067-148244:1:exon

WP_231895762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146067-148244:1:exon

PD885_RS21820
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: xopP
locus tag: PD885_RS21820
old locus tag: PD885_00123
so part of: sequence
location: 148297..150426
location: region:148297-150426:1
so has part: feature:148297-150426:1:exon
subclass of: SO_0000010

69055292
type: Gene
SIO_000068: ncbigene

position:148297:1
position: 148297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150426:1
position: 150426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148297-150426:1:exon

PD885_RS21820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: xopP
locus tag: PD885_RS21820
old locus tag: PD885_00123
inference: COORDINATES: protein motif:HMM:NF041354.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system effector XopP
translation: MHRVATSKQCSTELAESVILVAVPADPEAAASMSVDDSARQSSPLDGLSARPTKSVKPPVAGSSAALPAPSHTASSPASDKQPQSTDPANILEIALEKTKVWNKVIISDDERRSQPGAEPLLSMEKRVELSQNAMKFSREGLQAIADLRLGNRLRSNGAVDHERALWTVLGTSAATGYRARNELIEEQASIDPTDLECQDPDEWCGYLSELEQYRSAMGESLRRMKKPAAHGKTLKAGPAIMTLITVTYVFCHETMRSIRSLLVDSYRTQLARQVEASGLQASDLQELIARLHELDEAENYRGDTVAEAFTALTKVVTESICPSEAGAALSPQTVAQHKDVLEDYAEQFGRVGLGLCLDVAALIKGDGDDHIWQSMLQLAQVLTEYRQSVLDLIRSVGPGKREVIAPPPATIEEPPVSRARTKSARKHRKPGNRAAAESSLVPAASAVPNDTRTPPQQQADSLLKKVRLERAMVAELHADVIQIANRLGKDTGSVEEMMHCSKQDAMIAFTFVRSSIQGWFEKDQLLQAKAKLPPGDERIAQLSERLELLGMIEQRVQTREADALKSDTQPRAPHLSRLLEMHQVARVTSPTRLRSDNDSGDHGTLFEMRIEHAPLSNGERPAPWFVHLHTAKPVTVNAVPSLEYKEFTAVHLKTAKEKNLGKRWEMLMQALGNNDAKVHRSKIDSALLASLLEVSRGGKSSPEQFPNQ
SIO_010081: PD885_RS21820
subclass of: SO_0000673
so part of: PD885_RS21820
location: 148297..150426
location: region:148297-150426:1
so has part: feature:148297-150426:1:exon

WP_231892693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148297-150426:1:exon

PD885_RS21825
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: xopP
locus tag: PD885_RS21825
old locus tag: PD885_00124
so part of: sequence
location: 150479..152656
location: region:150479-152656:1
so has part: feature:150479-152656:1:exon
subclass of: SO_0000010

69055293
type: Gene
SIO_000068: ncbigene

position:150479:1
position: 150479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152656:1
position: 152656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150479-152656:1:exon

PD885_RS21825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: xopP
locus tag: PD885_RS21825
old locus tag: PD885_00124
inference: COORDINATES: protein motif:HMM:NF041354.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system effector XopP
translation: MHRVATSKQCSTELAEPVSLAAVPADPAAAASTSVDDSARPSSPLDGLSARPTKPVKPRIAGSSAALPGPSHTASSPASDKQPQSTDPADILQTALRRVEIWNEVITRDDEQRSQPGAAPLLSREKRVELSLNAMKSAREGLQAIVDLKLQNPLTSDALVENEAALCTILGMSAAHGYAAREELLREEWAQQFSMPEPTDPTISRTTVRASVHHADVERQDPDQWSGYLSEIEKYRSAMDESLRRMKKPEAHGKTIENVPTMMELIKVGLGLCHEQMQPIRCLLVDIYRLRLLRQVEASGSHDVTARLHELCEVKNYFEDTVADAFTALGHVVTGSVRPSEASAALTPQIVAQHKDVLEDYAEQFGRVSLGLCLDVAALIKGDGDDNIWQSMLDLAQALTDYRQCVLDLIRSVGPGKREVIAPPPATIEESPASRARPKSARKHRKPGNRAAAESSLVPAPPAVPNDTRTLAQQQADIVLKKFPLERAMVTELDADPIQIANRLGKDTGSVNEMMHCSRQDAMIAFTFVRSSIQGWFAKDQLLQAKAKLPPGDERIAQLSERLELLGMIEQRVQTRETDALKSDTQPRAPHLSRLLEMHQVASVTSPTRLRSDNDSGDHGTLFEMRIEHAPLSNGERPAPWFVHLHTAKPVTANAVPSLAYKEFTAVHLKTAKEKNLGKSWEMLMQALGNNDAKVHRSKIDSALLASLWHVHRSGKSSPEKFPNQ
SIO_010081: PD885_RS21825
subclass of: SO_0000673
so part of: PD885_RS21825
location: 150479..152656
location: region:150479-152656:1
so has part: feature:150479-152656:1:exon

WP_231895763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150479-152656:1:exon

PD885_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: xopP
locus tag: PD885_RS00665
old locus tag: PD885_00125
so part of: sequence
location: 152794..154971
location: region:152794-154971:1
so has part: feature:152794-154971:1:exon
subclass of: SO_0000010

61892602
type: Gene
SIO_000068: ncbigene

position:152794:1
position: 152794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154971:1
position: 154971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152794-154971:1:exon

PD885_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: xopP
locus tag: PD885_RS00665
old locus tag: PD885_00125
inference: COORDINATES: protein motif:HMM:NF041354.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system effector XopP
translation: MHRVGKIKQRSTELAESVSLAAAPADPAAATSTSVDGSARPSSPLDGLSARPTKSVKPPVAGSSAALPAPSHTASSPASDKQPQSTDPANILQTALGRVEVWKAMVARDEQQRSQPGAAPLLSVKQSVELSQNAMESARKGLQAIADLRLGNRLRANAAVENEATLVMILGASAVNGYSACEELMRDKWTHQLGIPEHTGPTSTNAAVRESMPRTHVERQDPKEWYGHLSELEKYRSAMDESLRRMKKPEAHGKTIENVPTMMDLIRANLGFCHETMHTTRGVLIDICRVRLENQVQASGSHDVTARLYELYEAKNYRSDAVTEAFTALGEVVTESICPSEASAPLTPQIVAQHKDVLEDYAEQFGRVGLGLCLDVAALIKGDGDDHIWRSMLQLAQALTEYRQGVLDLIRSVGPGKREVIAPPPATIEEPPVSRARQKSARRHRKPVNRTAAESSLVPAPPAVPNDTRTLAQQQADIVLKKFPLERAMVTELDADLIQIANRLGKDTGSVNEMMHCSRQDAMIAFTFVRSSIQGWFEKDQLLQAKAKLPPGDERIAQLSERLELLGMIEQRVQTREADALKSDTQPRAPHLSRLLEMHQVARVTSPTRLRSDNDSGDHGTLFEMRIEHAPLSNGERPAPWFVHLHTAKPVTANAVPSLEYKEFTAVHLKTAKEKNLGNRWETLMQALGNNDAKVHRSKIDSALLASLLEVSRGGKSSPEQFPNQ
SIO_010081: PD885_RS00665
subclass of: SO_0000673
so part of: PD885_RS00665
location: 152794..154971
location: region:152794-154971:1
so has part: feature:152794-154971:1:exon

WP_231892691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152794-154971:1:exon

PD885_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: xopP
locus tag: PD885_RS00670
old locus tag: PD885_00126
so part of: sequence
location: 155024..157231
location: region:155024-157231:1
so has part: feature:155024-157231:1:exon
subclass of: SO_0000010

61892603
type: Gene
SIO_000068: ncbigene

position:155024:1
position: 155024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157231:1
position: 157231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155024-157231:1:exon

PD885_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: xopP
locus tag: PD885_RS00670
old locus tag: PD885_00126
inference: COORDINATES: protein motif:HMM:NF041354.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system effector XopP
translation: MHRVETTKQRSTKLAESVSLAAVPTDPAAAVSTSVDDSARPSSPLDGLSARPTKSVKPPVAGSSAALPGPSHTAPSPASEKQPQSTDPANILRIAMDKGPVWNEMIAKDDALRSQPGAAPLLSREQRLKLSQNAMKSAREGLQAIADLRLGNRLRENAAAEHEATLFTILGASAATAYEAHNELIEDKWVHQLNATQLTEPRLDPVVVKVDLHHTDLERQDPDEWYRYLSELEQYRSAMNESLRRMKKPGAHGKRLKNIPAVMRLISGDHAFCHETMRSIRCLLVDIYRIRLWRQVEASALRDSGLQASGLQEVMARLDELDKVKSYRSDTVAEAFTALTKVVTESARPSEANAALTPQIVAQHKDVLEDYAEQFGRFGLGLCLDVAALIKGDGDDNIWQSMLDLAQVLTEYRQSVLDLIRSVGPGKREVIAQPPATIDEPPVSRARQKSTRKHRKPGNRAAAESSLVPAPPAVPNDTRTLAQQQADIVLKKFPLERAMVTELDADPIQIANRLGKDTGSVNEMMHCSRQDAMIAFTFVRSSIQGWFAKDQLLQAKAKLPPGDERIAQLSERLELLGMIEQRVQTRETDALKSDTQPRAPHLSRLLEMHQVASVTSPTRLRSDNDSGDHGTLFEMRIEHAPLSNGERPAPWFVHLHTAKPVTANAVPSLDYKAFTAVHLKTAKEKNLGNRWETLMQVLGNNDAKVHRSKIDSTLLANLWHVHRSGKSSPETFTNQ
SIO_010081: PD885_RS00670
subclass of: SO_0000673
so part of: PD885_RS00670
location: 155024..157231
location: region:155024-157231:1
so has part: feature:155024-157231:1:exon

WP_231892690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155024-157231:1:exon

PD885_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00675
old locus tag: PD885_00127
so part of: sequence
location: 157803..158369
location: region:157803-158369:1
so has part: feature:157803-158369:1:exon
subclass of: SO_0000010

61892604
type: Gene
SIO_000068: ncbigene

position:157803:1
position: 157803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158369:1
position: 158369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157803-158369:1:exon

PD885_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00675
old locus tag: PD885_00127
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVQQDVIKLLKQMLARVGGELIHGGADDLMQRKKEIEKRIKDAPARNPATQIETAENRSVLDDMQQLMYSIELTLEAAKADDPSLMELVPCPLLNSGLVNAASDMASLFKTDADKTDADKTVAGLLIQKFETRIQNIFGKILKGESVPRGVANAVAGSKNDPAVLIGKLLALVERYPDLGKPRTAPP
SIO_010081: PD885_RS00675
subclass of: SO_0000673
so part of: PD885_RS00675
location: 157803..158369
location: region:157803-158369:1
so has part: feature:157803-158369:1:exon

WP_134656566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157803-158369:1:exon

PD885_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00680
old locus tag: PD885_00128
so part of: sequence
location: 158887..159441
location: region:158887-159441:1
so has part: feature:158887-159441:1:exon
subclass of: SO_0000010

61892605
type: Gene
SIO_000068: ncbigene

position:158887:1
position: 158887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159441:1
position: 159441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158887-159441:1:exon

PD885_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00680
old locus tag: PD885_00128
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVDDLTPKFQQLIIKQLEVMLARVSGEDRRIGGDDFQKQVEWFQKQMGDKPAQPSVSLVETEQDSDTLKIMKGLVGRIDIALMGANNGGEDGLMMNVICPLASSSALATASNMVGGYETGFIAPKDEEMRRVQNLLKSIKEGQPVRKGVAIALSQSKDKSDVLNPGVLLSKLLALVRQYPNFKE
SIO_010081: PD885_RS00680
subclass of: SO_0000673
so part of: PD885_RS00680
location: 158887..159441
location: region:158887-159441:1
so has part: feature:158887-159441:1:exon

WP_040762642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158887-159441:1:exon

PD885_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00685
old locus tag: PD885_00129
so part of: sequence
location: 159956..163072
location: region:159956-163072:1
so has part: feature:159956-163072:1:exon
subclass of: SO_0000010

61892606
type: Gene
SIO_000068: ncbigene

position:159956:1
position: 159956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163072:1
position: 163072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159956-163072:1:exon

PD885_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00685
old locus tag: PD885_00129
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008574465.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3416 domain-containing protein
translation: MRICVLNEVTPSPIGLDQRCVAAREAGCDYVVMAAPFERDADGRLIEPSADADAQGKRLREAVQAARRAGVKLLIDVRLDEVGGASAVVRDNPQWFRARSTAVPDPRQPRATPEIAEARFTYAQEGAALVAWWGARLLDWAGQGVGGFRLLQPQQVPAQRWRELIAHVHAQAPEVVFAAWTPGLGLEALRQLAGAGFDAAFSSLAWWDGRGSWFFDEDTALRALASHVVAVLHALDGKRAAMPEQHWQLARALGGAWLLDDAHLDAVPVPIGATDGLPTSDAGMRLRPLLSEATGFTAVAVEPLGGLPSLLLINGDANHVVPVPASDLLRLLGDAEALVAEDGRTLSGATWEALEPGEVRVYRSVPARHVLAVPRMRQRAQTAAAWPRVCIESVTPSVDNGRFPVKRVVGDRLYVEADAFCDGHDRIAVAVLWRPADAKTWASAPMRGLGNDRWRAEFPLERIGTYEFRVEGWRDVFATLHADLEKKRAANTVLPVDVQEAVAVVQAAHARSAGALAKRLQAILTRIGAQSEPLQQLAIVLEPDTAQAMALADDKPFRSETPVTFRVESERRAAHFASWYELFPRSQSGDPQRHGTFDDVIERLAHIRAMNFDVLYMPPIHPIGAKNRKGRNNSVTAVDGEPGSPYAIGATDGGHTEVHAELGGLDGFRRLIQAARAHGLEVALDFAIQCAPDHPWLRDHKDWFTWRADGSIPYAENPPKKYQDIVNVDFYASGAVPDLWNTLRDAVLFWVNEGVTLFRVDNPHTKPFPFWEWLIAEIRGRRPDVVFLSEAFTRPKMMYRLAKCGFSQSYTYFTWRNHKHELQAYVEEVNAGVPRECFRPHFFVNTPDINPLFLQTSGRNGHLIRAALATTLSGLWGMYQGFELCEATPLAPGKEEYMDSEKFQLRAWPERAPGDIVDEITRFNQLRRMHPELQSHLGTRFYQAHHDQVLYFGKFLDAGYLSRSRSMVLVAINLDPHAGQDADIEIPLWELGLPDHATVAVDDLWDGHRFEWQGKYQHIRLEATRPFALWRIRAGEVA
SIO_010081: PD885_RS00685
subclass of: SO_0000673
so part of: PD885_RS00685
location: 159956..163072
location: region:159956-163072:1
so has part: feature:159956-163072:1:exon

WP_002808539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159956-163072:1:exon

PD885_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: treS
locus tag: PD885_RS00690
old locus tag: PD885_00130
so part of: sequence
location: 163069..166419
location: region:163069-166419:1
so has part: feature:163069-166419:1:exon
subclass of: SO_0000010

61892607
type: Gene
SIO_000068: ncbigene

position:163069:1
position: 163069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166419:1
position: 166419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163069-166419:1:exon

PD885_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: treS
locus tag: PD885_RS00690
old locus tag: PD885_00130
EC number: 5.4.99.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006451143.1
GO function: GO:0047471 - maltose alpha-D-glucosyltransferase activity [Evidence IEA]
GO process: GO:0005991 - trehalose metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: maltose alpha-D-glucosyltransferase
translation: MKAVASLQADAEQSAVVADQLWYKDAIIYQVHVKSFFDSNDDGIGDFPGLISKLDYIAELGVDTIWLLPFYPSPRRDDGYDIAEYMAVHPDYGSIADFEQLVAQAHARGIRIVTELVINHTSDQHPWFQRARNAPAGSPERDFYVWSDTDQEYEGTRIIFCDTEKSNWTWDPVAGQYFWHRFYSHQPDLNFDNPAVLEAVLEVMRFWLDRGVDGLRLDAVPYLIERSGTSNENLPETHAILRKIRTTLDAEYPDRMLLAEANMWPEDTQQYFGKNADECHMAFHFPLMPRMYMAIAREDRFPITDIMRQTPEIPESCQWAIFLRNHDELTLEMVTDSERDYLWQTYASDRRARINLGIRRRLAPLLERDRRRIELMTSLLLTMPGTPVLYYGDEIGMGDNIHLGDRDGVRTPMQWSIDRNGGFSRADPAQLVLPPVMDPLYGFQAVNVEAQIRDQHSLLTWTRRVLSVRKRYQAFGRGTLRFLYPGNRRMLAYLRSCHDETVLCVANLSHTLQAVELDLSEFEGRVPVDIIGGGSFPPIGRLTYLLTVPPFGFYAFQLVSEGTLPDWHVPTPVPLPDYHTLVLRSDTDESNALLPHLPTLEAEILPAWLSARRWFSAKDRVLKNVRISRRTPLPGDEPMSLLELEVELEDGHHESYMLPVGIVWERDQPSTLAEQLALARVRQGREVGYLTDAFALKTMVRGVIDALRENATLDFRDGDDASQQGQVRFEATAALAKLDIPQDPDIRWLSAEQSNSSLVVADKAVFKLLRHVANGANPEIEIGRRLTEMGYANAAPLLGSVSRIDGQGTVTTIALLQGFIRNQGDAWRWTLDHLARSFDEYVTAQTDESRAEAIAGYDVFASVVGKRLAELHAALSRDTDDADFAPQRIDLPTANDVVAGVARQVEDIWDTVNARLASSDDAIERDALEAVLAERPQLEALLAKAPSVLADSLLTRVHGDFHLGQILVAFDDVILIDFEGEPAKPLAARRAKASPLRDVAGFLRSLDYASEVSARGEEGTAARAGVGVDTHLDQFLVEFRRRSTDAFLDAYRAVLDTSVHPWIAPAAFNTATLLFLVEKACYEVRYEAANRPGWLMVPIEGLRRILQGVRAGAGDT
SIO_010081: PD885_RS00690
subclass of: SO_0000673
so part of: PD885_RS00690
location: 163069..166419
location: region:163069-166419:1
so has part: feature:163069-166419:1:exon

WP_088056608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163069-166419:1:exon

PD885_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: glgB
locus tag: PD885_RS00695
old locus tag: PD885_00131
so part of: sequence
location: 166440..168614
location: region:166440-168614:1
so has part: feature:166440-168614:1:exon
subclass of: SO_0000010

61892608
type: Gene
SIO_000068: ncbigene

position:166440:1
position: 166440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168614:1
position: 168614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166440-168614:1:exon

PD885_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: glgB
locus tag: PD885_RS00695
old locus tag: PD885_00131
EC number: 2.4.1.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019304878.1
GO function: GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1,4-alpha-glucan branching protein GlgB
translation: MTNRWDPGVTRALAEARHGDAFAVLGAHPTDAGRVLRTYQPGANHVSAVLDDGQVIALGAGPEPGMFAGDLPAQGGYRLRIGWPGGEQETADPYAFGPQLSDFDLHLISEGHHLQLADALGANAIEVDGVRGTRFAVWAPNATRVAVVGDFNGWDARRHPMRLRHQSGVWELFIPDVGPGAHYQYRLRGPHGNELPAKADPVARRAQLAPGTASIVADPTPHQWSDDGWMATRARRQAHDAPMSIYELHAGSWLREEGVDLDWDGLADRLIPYVAGMGFTHVELLPVTEHPFGGSWGYQPLGLFAPTARFGSPDGLARFVDRCHREGIGVIVDWVPAHFPTDAHGLAHFDGTSLYEHADPREGFHRDWNTLIYNHGRREVSGFLIASALEFLQRFHVDGLRVDAVASMLYRDYSRNAGEWVPNIHGGRENYETIAFLRRLNEVVREHTPGAVMIAEESTAFPGVTADVAHGGLGFHYKWNMGWMHDTLHYAALDPLYRRHHHGELTFSMVYAYSERFVLPISHDEVVHGKGSLLGRMSGDDWQRFANLRAYLGFMFTHPGRKLLFMGCEFGQPTEWNHDGGIPWHLLDDPRHRGVQTLVRDLNRLYVEYPALHVHDDDPAGFAWVVGDDSANSVVAFLRKGKRGDAPVLVVINFTPIVQHGYRIGAPQSGKWREVFNSDAAIYGGANLGNGGIVTAQQQSMHGHAQSLPLLLPPLGVIVLTPHG
SIO_010081: PD885_RS00695
subclass of: SO_0000673
so part of: PD885_RS00695
location: 166440..168614
location: region:166440-168614:1
so has part: feature:166440-168614:1:exon

WP_172402104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166440-168614:1:exon

PD885_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00705
old locus tag: PD885_00132
so part of: sequence
location: 168856..170004
location: region:168856-170004:1
so has part: feature:168856-170004:1:exon
subclass of: SO_0000010

61892609
type: Gene
SIO_000068: ncbigene

position:168856:1
position: 168856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170004:1
position: 170004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168856-170004:1:exon

PD885_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00705
old locus tag: PD885_00132
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006451149.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldo/keto reductase
translation: MNTRRQFLCAAAAGTVALAAAPLMAQSSAPGSVMPTRGKTAAIALPANPVTRSGRYRPTSRLGFGGVAIGNAFAPTSDAQSEHTLAAVWESGVRYFDTSPWYGLGLSERRTGHHLHRHAPADYVLSTKVGRLLSATDKPPKTMWQQPSPFDYRYDYSASGVRRSIEDSLQRLGVSQIDIAYIHDLSPENEQDLGTPWQQRFAEAVKGAMPELTKMRKEGLIKAWGFGVNRPEPALRAIEEADPDIFLLACQYSLLDHAQALHDTFPKIAKHGASVVVGAPLLAGYLAGRDRYLYDDTVPEWAPAKRQKALAICDRHGVDLRTVSLQFAAAPKVVSAVIPGARTAEQAHANAASMRVAIPAAVWEELKREHVIEADAPVPVLS
SIO_010081: PD885_RS00705
subclass of: SO_0000673
so part of: PD885_RS00705
location: 168856..170004
location: region:168856-170004:1
so has part: feature:168856-170004:1:exon

WP_002808533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168856-170004:1:exon

PD885_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00710
old locus tag: PD885_00133
pseudo: true
so part of: sequence
location: complement(170057..171663)
location: region:170057-171663:-1
so has part: feature:170057-171663:-1:exon
subclass of: SO_0000010

61892610
type: Gene
SIO_000068: ncbigene

position:170057:-1
position: 170057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171663:-1
position: 171663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170057-171663:-1:exon

PD885_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00710
old locus tag: PD885_00133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005912119.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: carboxylesterase family protein
SIO_010081: PD885_RS00710
subclass of: SO_0000673
so part of: PD885_RS00710
location: complement(170057..171663)
location: region:170057-171663:-1
so has part: feature:170057-171663:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170057-171663:-1:exon

PD885_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00715
old locus tag: PD885_00134
so part of: sequence
location: complement(171660..172655)
location: region:171660-172655:-1
so has part: feature:171660-172655:-1:exon
subclass of: SO_0000010

61892611
type: Gene
SIO_000068: ncbigene

position:171660:-1
position: 171660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172655:-1
position: 172655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171660-172655:-1:exon

PD885_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00715
old locus tag: PD885_00134
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005989692.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MTLVVAGSLLAGPVLAAEMPSADTAAEQASRIQLWPKAVAPGDKTLPQPQRIVERSSDPALPDRYIQQISTPYLVVYRPKRPNGTALLVTPGGGYQLIVLDNEGSALVPGFVDQAGITLFVLRYRLPGEGHPNGADVPLADAQRALRLIRANAARYGIDTQRVGVMGFSAGGHVAASLGTRYAAQVYPKVDAADALSARPDFELLIYPVIDMDSANAHMGSRQRLLGSTPSAAQLRAYSPHLHVDARTPLTFLLHAQDDTVVSVRNSLLFHDALLRAGVPSELHVFPQGGHGFGTASTTGLTVAAWPQLAQAWIAHITKAQVSTAAQDTAQ
SIO_010081: PD885_RS00715
subclass of: SO_0000673
so part of: PD885_RS00715
location: complement(171660..172655)
location: region:171660-172655:-1
so has part: feature:171660-172655:-1:exon

WP_002808529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171660-172655:-1:exon

PD885_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00720
old locus tag: PD885_00135
so part of: sequence
location: 172855..173691
location: region:172855-173691:1
so has part: feature:172855-173691:1:exon
subclass of: SO_0000010

61892612
type: Gene
SIO_000068: ncbigene

position:172855:1
position: 172855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173691:1
position: 173691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172855-173691:1:exon

PD885_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00720
old locus tag: PD885_00135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005989690.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNDAATPASSASSLSQIAQRFVEARRAGASLPDFPGRIPDDLVAAYRVQDIAISQWDDQVVGWKVGYIAAERRDASGDERLLGPIFSHKLWNATGGTTQFPIYEGGFGAVEAEYVLRLGADAPAEQTHFTPDEAAQLPATLFIGVEIASSPLATINTLGPRVVISDFGNNNGLILGPEVTDWLRREASSLTAQTLIDDQIVGTGGANTLPGGLRAAYAFALSRSAQRGRPLKRGDLIATGNATGIHDIEVGQRALIRFAGIGDISCTAVSAKSWRTQ
SIO_010081: PD885_RS00720
subclass of: SO_0000673
so part of: PD885_RS00720
location: 172855..173691
location: region:172855-173691:1
so has part: feature:172855-173691:1:exon

WP_002808527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172855-173691:1:exon

PD885_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00725
old locus tag: PD885_00136
pseudo: true
so part of: sequence
location: 173714..>174706
location: region:173714-174706:1
so has part: feature:173714-174706:1:exon
subclass of: SO_0000010

61892613
type: Gene
SIO_000068: ncbigene

position:173714:1
position: 173714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174706:1
position: 174706
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173714-174706:1:exon

PD885_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00725
old locus tag: PD885_00136
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016850027.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: TRAP transporter substrate-binding protein
SIO_010081: PD885_RS00725
subclass of: SO_0000673
so part of: PD885_RS00725
location: 173714..>174706
location: region:173714-174706:1
so has part: feature:173714-174706:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173714-174706:1:exon

PD885_RS21830
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21830
so part of: sequence
location: 174740..175153
location: region:174740-175153:1
so has part: feature:174740-175153:1:exon
subclass of: SO_0000010

69055294
type: Gene
SIO_000068: ncbigene

position:174740:1
position: 174740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175153:1
position: 175153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174740-175153:1:exon

PD885_RS21830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035405.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter small permease subunit
translation: MVVQGWQVMTRYVLNDSPSWTEPVTLLLLSTALSLGAAAGVHTNRHFGFYLLSEHVPPLVRTVFDLIRPLMIMAIGAVLAWWSAALLLDGLDIKMAGAQMPQSINYLPLSIGGALMVVFALHKLWRVLRPIHTAGVR
SIO_010081: PD885_RS21830
subclass of: SO_0000673
so part of: PD885_RS21830
location: 174740..175153
location: region:174740-175153:1
so has part: feature:174740-175153:1:exon

WP_231892765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174740-175153:1:exon

PD885_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00730
old locus tag: PD885_00137
pseudo: true
so part of: sequence
location: 175153..176435
location: region:175153-176435:1
so has part: feature:175153-176435:1:exon
subclass of: SO_0000010

61892614
type: Gene
SIO_000068: ncbigene

position:176435:1
position: 176435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175153-176435:1:exon

PD885_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00730
old locus tag: PD885_00137
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003489871.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: TRAP transporter large permease
SIO_010081: PD885_RS00730
subclass of: SO_0000673
so part of: PD885_RS00730
location: 175153..176435
location: region:175153-176435:1
so has part: feature:175153-176435:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:175153-176435:1:exon

PD885_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00735
pseudo: true
so part of: sequence
location: 176534..178071
location: region:176534-178071:1
so has part: feature:176534-178071:1:exon
subclass of: SO_0000010

61892615
type: Gene
SIO_000068: ncbigene

position:176534:1
position: 176534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178071:1
position: 178071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176534-178071:1:exon

PD885_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345889.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: family 43 glycosylhydrolase
SIO_010081: PD885_RS00735
subclass of: SO_0000673
so part of: PD885_RS00735
location: 176534..178071
location: region:176534-178071:1
so has part: feature:176534-178071:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:176534-178071:1:exon

PD885_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00740
old locus tag: PD885_00140
so part of: sequence
location: 178210..179268
location: region:178210-179268:1
so has part: feature:178210-179268:1:exon
subclass of: SO_0000010

61892616
type: Gene
SIO_000068: ncbigene

position:178210:1
position: 178210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179268:1
position: 179268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178210-179268:1:exon

PD885_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00740
old locus tag: PD885_00140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017158097.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LacI family DNA-binding transcriptional regulator
translation: MPARKMPEEGMPGLPKGKVATINDIARMSGVSKKTVSRIINNSPLVRQDTREKVEALMREVGYAPDPLARGLAFRRSFLIGMVYDNPTAQYIVDMQYGALDALRGSSFELVVHPCDSRSPGYIEGVRRFAQAQKLHGVILVPRASEDQALADMLAEIGCRYTRIASVALDTTSQTVITHDRDGAAEAADYLLSLGHRDIALVTGPSAYRSSIERTSGFADALTRRGIELPPERIVEAGYTFESGVAAAEKLLLGKKRPTAIFTGNDEMAAGIYKVALRAGIHIPRQLSVIGYDDSSLASRLWPPLTSVRRHTRDTGRTAAAMLIQPDNVLQLPTASVRPHLIVRDSCQPPED
SIO_010081: PD885_RS00740
subclass of: SO_0000673
so part of: PD885_RS00740
location: 178210..179268
location: region:178210-179268:1
so has part: feature:178210-179268:1:exon

WP_040762639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178210-179268:1:exon

PD885_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00745
old locus tag: PD885_00141
so part of: sequence
location: 179581..180696
location: region:179581-180696:1
so has part: feature:179581-180696:1:exon
subclass of: SO_0000010

61892617
type: Gene
SIO_000068: ncbigene

position:179581:1
position: 179581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180696:1
position: 180696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179581-180696:1:exon

PD885_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00745
old locus tag: PD885_00141
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003476829.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III effector HopX1
translation: MFPKLDRGSQSATPTTAPPPPPERHPRGDVDARRPAADTSDSSLLDELRRPRPKRASSASASVAPNAALSSNDLALAAYLLARDIDGRRVPPAEVGRLRKANDSISNTRQLLQFGRGNVDTDLRKTRNNSGWRTKAARQFKNELYARGAGQFIDYAQQMTHLAAAAVVFGSGNCGEHASVTSIYHSSRLDAQETVHHVAKRNHAWVEARVPAGDDADSSTIVMDGWAKGPAILAPDSRFAARREKLCSNVQLDAASGRDARIATNDLILEMRAKGPAEVERRIHQGVTLSARFVAFIDSFLPSGIGDWSEQHVLDDAFAGRVRAHLDASAASAELLARAERIAGEFGVVGVGGTAQAQQIIAATRVLAALR
SIO_010081: PD885_RS00745
subclass of: SO_0000673
so part of: PD885_RS00745
location: 179581..180696
location: region:179581-180696:1
so has part: feature:179581-180696:1:exon

WP_145954087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179581-180696:1:exon

PD885_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: kduI
locus tag: PD885_RS00750
old locus tag: PD885_00142
so part of: sequence
location: 180899..181747
location: region:180899-181747:1
so has part: feature:180899-181747:1:exon
subclass of: SO_0000010

61892618
type: Gene
SIO_000068: ncbigene

position:180899:1
position: 180899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181747:1
position: 181747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180899-181747:1:exon

PD885_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: kduI
locus tag: PD885_RS00750
old locus tag: PD885_00142
EC number: 5.3.1.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005991266.1
GO function: GO:0008697 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity [Evidence IEA]
GO process: GO:0045490 - pectin catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-dehydro-4-deoxy-D-glucuronate isomerase
translation: MSRCCKTHYATHPDAIKGASNNDLRELYLLDGLFVDEAVTLKYTHYERFVLGGAAPLGKTLALPRQTEPASAAGHPFLERRELGIVNVGTGSVTVDGTVYTLGPKDGLYVAMGSTEVSFASDDATNPARFYLASTPAHARLKTKQLSIKDAVALERGALDTSNERTIYQYIVPATCQSSQLLLGLTVLKPGSVWNTMPPHLHDRRSEVYFYFDLGANDRVYHFMGEPQAQRHIVIQNNEAVVSPPWSIHIGAGTSNYAFIWAMGGENLDYTDMHVLDICQLK
SIO_010081: PD885_RS00750
subclass of: SO_0000673
so part of: PD885_RS00750
location: 180899..181747
location: region:180899-181747:1
so has part: feature:180899-181747:1:exon

WP_002808518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180899-181747:1:exon

PD885_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: kduD
locus tag: PD885_RS00755
old locus tag: PD885_00143
so part of: sequence
location: 181906..182667
location: region:181906-182667:1
so has part: feature:181906-182667:1:exon
subclass of: SO_0000010

61892619
type: Gene
SIO_000068: ncbigene

position:181906:1
position: 181906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182667:1
position: 182667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181906-182667:1:exon

PD885_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: kduD
locus tag: PD885_RS00755
old locus tag: PD885_00143
EC number: 1.1.1.127
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035409.1
GO function: GO:0008678 - 2-deoxy-D-gluconate 3-dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0000272 - polysaccharide catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
translation: MRNPFSLEGKVALVTGANRGLGQGIALALALAQAGADIAGAGIQAPTETEEKVKALGRRFVAIRADLIRIEPVQRILDESLAGLGRLDILVNNAGLIRRTDAVDFSKQDWDDVLNVNLKSAFFMAQAAGRHFIAQGSGKIINIASMLSFQGGIRVPSYTASKSGIARITRLLANEWGSKGVTTNAIAPGYMATDNTAQLRADQARNQSILDRIPAGRWGVPADLGGTAVFLASSAADYVNGAIIPVDGGWLAR
SIO_010081: PD885_RS00755
subclass of: SO_0000673
so part of: PD885_RS00755
location: 181906..182667
location: region:181906-182667:1
so has part: feature:181906-182667:1:exon

WP_002808515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181906-182667:1:exon

PD885_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: phhA
locus tag: PD885_RS00760
old locus tag: PD885_00144
so part of: sequence
location: complement(182892..183782)
location: region:182892-183782:-1
so has part: feature:182892-183782:-1:exon
subclass of: SO_0000010

61892620
type: Gene
SIO_000068: ncbigene

position:182892:-1
position: 182892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183782:-1
position: 183782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182892-183782:-1:exon

PD885_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: phhA
locus tag: PD885_RS00760
old locus tag: PD885_00144
EC number: 1.14.16.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017158567.1
GO function: GO:0004505 - phenylalanine 4-monooxygenase activity [Evidence IEA]
GO process: GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylalanine 4-monooxygenase
translation: MNTAPLRVENQLTDKGYVPVYTTAVVEQPWDGYSADDHATWGTLYRRQRALLVGRACDAFLQAQDAMGMGDTQLPRFDTLNAVLQAATGWTLVGVQGLLPELDFFEHLANKRFPVTWWIRRPDQIDYIAEPDLFHDLFGHVPLLMNPLFADFMQAYGRGGVKAHGIGPDALQNLTRLYWYTVEFGLINTPQGLRIYGAGIVSSKGESLHSLESPAPNRIGFDLHRIMRTRYRIDSFQKTYFVIDSFAQLMNATAPDFTPIYADLAQQAQLPAGDMLETDQVIQRGNGDGWSGDGDV
SIO_010081: PD885_RS00760
subclass of: SO_0000673
so part of: PD885_RS00760
location: complement(182892..183782)
location: region:182892-183782:-1
so has part: feature:182892-183782:-1:exon

WP_002808514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182892-183782:-1:exon

PD885_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00765
old locus tag: PD885_00145
so part of: sequence
location: 183910..184392
location: region:183910-184392:1
so has part: feature:183910-184392:1:exon
subclass of: SO_0000010

61892621
type: Gene
SIO_000068: ncbigene

position:183910:1
position: 183910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184392:1
position: 184392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183910-184392:1:exon

PD885_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00765
old locus tag: PD885_00145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005912138.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lrp/AsnC family transcriptional regulator
translation: MDQPIALDRTDLRLLALLQTQGRSSNAELAMQVNLSASACLRRTQRLEAAGIIAGYGARLDARALGLGLQAFVRVQLEQHGQADIEHFAEGVRGWDEVVACWALTGDMDYLLHVQVRDLEHFSRFLLDRLLNATGVSDVNSSFVLRTVKAAEGLPLSHLA
SIO_010081: PD885_RS00765
subclass of: SO_0000673
so part of: PD885_RS00765
location: 183910..184392
location: region:183910-184392:1
so has part: feature:183910-184392:1:exon

WP_002808513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183910-184392:1:exon

PD885_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00770
pseudo: true
so part of: sequence
location: <184511..>184743
location: region:184511-184743:1
so has part: feature:184511-184743:1:exon
subclass of: SO_0000010

61892622
type: Gene
SIO_000068: ncbigene

position:184511:1
position: 184511
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:184743:1
position: 184743
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184511-184743:1:exon

PD885_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157370.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: TonB-dependent siderophore receptor
SIO_010081: PD885_RS00770
subclass of: SO_0000673
so part of: PD885_RS00770
location: <184511..>184743
location: region:184511-184743:1
so has part: feature:184511-184743:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:184511-184743:1:exon

PD885_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00775
old locus tag: PD885_00146
so part of: sequence
location: complement(184784..185626)
location: region:184784-185626:-1
so has part: feature:184784-185626:-1:exon
subclass of: SO_0000010

61892623
type: Gene
SIO_000068: ncbigene

position:184784:-1
position: 184784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185626:-1
position: 185626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184784-185626:-1:exon

PD885_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00775
old locus tag: PD885_00146
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017159607.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MTVAADVSANSAVANAIPLIELDQASVMRGQVRVLHALSLRIALGQHTAILGPNGCGKSSFIKLITRELYPLVRADGQPAVKVLGQPHWQVGRLCSQLGIVTGDLSVNLANMPELDVESAVLSGFFRSYVVPPHRKISDDMRTRAREALALARALPLLGRQFAELSAGEMRRVLIARALVNRPQALLLDEPSTGLDLVARQHLLHTMRHLAQQGITLVLVTHHIEEIVPEIARVILLRAGRVVADGRRDALLTDASLSAVFDVPVRVQRDGERYWATVGA
SIO_010081: PD885_RS00775
subclass of: SO_0000673
so part of: PD885_RS00775
location: complement(184784..185626)
location: region:184784-185626:-1
so has part: feature:184784-185626:-1:exon

WP_002808512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184784-185626:-1:exon

PD885_RS20275
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS20275
pseudo: true
so part of: sequence
location: 185772..>185921
location: region:185772-185921:1
so has part: feature:185772-185921:1:exon
subclass of: SO_0000010

61896311
type: Gene
SIO_000068: ncbigene

position:185772:1
position: 185772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185921:1
position: 185921
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185772-185921:1:exon

PD885_RS20275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS20275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017115576.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: acyl-CoA desaturase
SIO_010081: PD885_RS20275
subclass of: SO_0000673
so part of: PD885_RS20275
location: 185772..>185921
location: region:185772-185921:1
so has part: feature:185772-185921:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:185772-185921:1:exon

PD885_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00780
so part of: sequence
location: 186006..186344
location: region:186006-186344:1
so has part: feature:186006-186344:1:exon
subclass of: SO_0000010

61892624
type: Gene
SIO_000068: ncbigene

position:186006:1
position: 186006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186344:1
position: 186344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186006-186344:1:exon

PD885_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008575019.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: calcium-dependent protein kinase 21
translation: MILRGVLIVCSACVAVFVAQAQVQDSQAYLQRMDTDGDGRVSGDEYLVWMSYAFDQRDLDHDGVLQGDELPARRGKPITRAAHRATLIERFVLQDANGDGYLSACELLAPPR
SIO_010081: PD885_RS00780
subclass of: SO_0000673
so part of: PD885_RS00780
location: 186006..186344
location: region:186006-186344:1
so has part: feature:186006-186344:1:exon

WP_052032139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186006-186344:1:exon

PD885_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00785
old locus tag: PD885_00148
so part of: sequence
location: 186393..187130
location: region:186393-187130:1
so has part: feature:186393-187130:1:exon
subclass of: SO_0000010

61892625
type: Gene
SIO_000068: ncbigene

position:186393:1
position: 186393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187130:1
position: 187130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186393-187130:1:exon

PD885_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00785
old locus tag: PD885_00148
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005992662.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MFTLDQVSCRYGQAIALDAVSLNFASGITTALIGPSGAGKSTVLRMLVGLEWPDSGTVAFDGTPLQRACLQAQRQRIGYVIQEGGLFPHLDARSNAALLAQTLGWTRQRIDARLETLCALCQLPPALLARYPAELSGGQRQRVGLIRALMLDPPALLLDEPLGALDPIVRYDLQAQMREMFAQLGKTVVLVTHDVAEAGYLADTLVLMRAGRVVQQGSARSLLEQPADAFVQRFLTAQRSIGDAA
SIO_010081: PD885_RS00785
subclass of: SO_0000673
so part of: PD885_RS00785
location: 186393..187130
location: region:186393-187130:1
so has part: feature:186393-187130:1:exon

WP_002808510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186393-187130:1:exon

PD885_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00790
old locus tag: PD885_00149
so part of: sequence
location: 187127..188599
location: region:187127-188599:1
so has part: feature:187127-188599:1:exon
subclass of: SO_0000010

61892626
type: Gene
SIO_000068: ncbigene

position:187127:1
position: 187127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188599:1
position: 188599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187127-188599:1:exon

PD885_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00790
old locus tag: PD885_00149
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005992664.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine betaine ABC transporter substrate-binding protein
translation: MIARVLFAGVLLICSIGVQAAHVTLGSKNFTEAVILGEIATAAGQRDGVEVQHRAQLGGTRILWRALETGQIDAYAEYTGTLAQELVQLPNASQAELRAALDARGLAMTDSLGFQDTYALGMRRDHARALGIESLSDLARHPTLKIGLSNEFMQRADGWPGVRAAYALPQTATGLDHDLAYRALQSGAIEVTDLYSTDAEIPYYQLQVLRDDRQYFPEYKAVFLYRKDLAQRSPAMLRALQGLQGRIDEATMQRLNAQVKLERQSEAAVAAQWLGVAPTSEADSRSTRLLRHTRQHLALVGISLGFALLIALPLGVLAARRPRLGQVVLSLTGVLQTLPSLAVFVFMIPLFGIGAKPAIAALFLYSLLPIVRNTHAGLTSIPRELHQTAQAIGLPAWTRLWRVELPLARRTIVAGIQTAAVINVGTATLGALIGAGGYGQPILTGIRLDDIGLILEGAIPAAVLALLVQAVFEGLEHWVTPRGLRLSQRG
SIO_010081: PD885_RS00790
subclass of: SO_0000673
so part of: PD885_RS00790
location: 187127..188599
location: region:187127-188599:1
so has part: feature:187127-188599:1:exon

WP_002808509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187127-188599:1:exon

PD885_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00795
old locus tag: PD885_00150
so part of: sequence
location: complement(188659..189840)
location: region:188659-189840:-1
so has part: feature:188659-189840:-1:exon
subclass of: SO_0000010

61892627
type: Gene
SIO_000068: ncbigene

position:188659:-1
position: 188659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189840:-1
position: 189840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188659-189840:-1:exon

PD885_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00795
old locus tag: PD885_00150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014088984.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminotransferase class V-fold PLP-dependent enzyme
translation: MSSHSLSSTLPAPLEWAERHHAFALPGKVTYLDAASRGPLLRAVQAVAHQAVDAMATPWQLPFDAWLHEIERLRALAAGLFDNDADGVAMVPSAAHGLATAARNLPLQRGAAVLVLEGQFPSNLLIWQRRCAEVGAHIVPVPTTAGATLTDAVLQAIAQTPALRIVALPHAYWLDGRALDLDRISAQVHACGAALVLDLSQSLGVLPTDLRCWRPDFVVSVGHKWLLGPMGLAWLWVAPQWRAHGVPIEEHWIGRDAGSSWEFPVATAPLYRSGARRFDAGGVADSLRVAMATMALQQVAAWEPARIAETLGALTTQWDAALHARGLGSWCTPGHAPHLTALRPPADQLEAVATTLGALGVICTRRHGRLRIAPHLSVTEHVLSRLIAALPGG
SIO_010081: PD885_RS00795
subclass of: SO_0000673
so part of: PD885_RS00795
location: complement(188659..189840)
location: region:188659-189840:-1
so has part: feature:188659-189840:-1:exon

WP_002808507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188659-189840:-1:exon

PD885_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: egtB
locus tag: PD885_RS00800
old locus tag: PD885_00151
so part of: sequence
location: 189912..191192
location: region:189912-191192:1
so has part: feature:189912-191192:1:exon
subclass of: SO_0000010

61892628
type: Gene
SIO_000068: ncbigene

position:189912:1
position: 189912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191192:1
position: 191192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189912-191192:1:exon

PD885_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: egtB
locus tag: PD885_RS00800
old locus tag: PD885_00151
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011050153.1
GO process: GO:0052699 - ergothioneine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ergothioneine biosynthesis protein EgtB
translation: MSALLPLPGHHQQQLTWLERYAQTRALSDRLAAPLSAEDAMVQSMPDASPGKWHLAHTTWFFERFVLQADPAYRVFDPAWDFLFNSYYLSVGPMHARARRGVLSRPSLQQVRDYRAAVDVQMQQRLQAGRLDAEACTIVQLGIQHEQQHQELLLTDIKHALWSNPLQPAYRNAAAPSAALASTLRWHARDEQIVEIGAAAWPQSDTFAYDNESPRHRVLVGAHALANRVVTNAEFQEFIDAGGYRGAGTWLSDGWAMVQAQGWQHPLYWDVDGREFTLDGWRARDPHAPVSHLSMFEADAFARWAGARLPTEAEWEQAATGVPVQGNFVDTDALQPRGAEAVDTGIQQLFGDVWEWTGSAYLPYPGFAPWPGSLGEYNGKFMNAQWVLRGGSCATPASHLRASYRNFFPSDARWQFAGVRLAKDLP
SIO_010081: PD885_RS00800
subclass of: SO_0000673
so part of: PD885_RS00800
location: 189912..191192
location: region:189912-191192:1
so has part: feature:189912-191192:1:exon

WP_002808506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189912-191192:1:exon

PD885_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: egtD
locus tag: PD885_RS00805
old locus tag: PD885_00152
so part of: sequence
location: 191189..192175
location: region:191189-192175:1
so has part: feature:191189-192175:1:exon
subclass of: SO_0000010

61892629
type: Gene
SIO_000068: ncbigene

position:191189:1
position: 191189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192175:1
position: 192175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191189-192175:1:exon

PD885_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: egtD
locus tag: PD885_RS00805
old locus tag: PD885_00152
EC number: 2.1.1.44
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157360.1
GO function: GO:0030745 - dimethylhistidine N-methyltransferase activity [Evidence IEA]
GO process: GO:0052699 - ergothioneine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-histidine N(alpha)-methyltransferase
translation: MNAAAHATQRAHAALTDLRPQPDDITADALAGLSQTPKTLPSKYFYDAHGSQLFEAITQQPEYYLTGTELGLLEASMPSIAQAIGAGVHVVEYGSGSGRKTELLLQGLRHVVAYTPLEISRTALLDSTARLAQKFPQIQMLPVCTDFTKPLRLPDAKRVACRHLIFFPGSTLGNFTNPAAIALMDAMRQTMGSDGCALIGIDLDKDAGVIEAAYNDAAGVTAKFTLNLLARLNREIGSDFDLDGFRHHAVYARERGRIETFLISQRAQRVHVGGKDFDFAEGEAMQVEYSYKYTDAHFAELAAAAGLKVTHGWNDAKDWFGLRLLRPF
SIO_010081: PD885_RS00805
subclass of: SO_0000673
so part of: PD885_RS00805
location: 191189..192175
location: region:191189-192175:1
so has part: feature:191189-192175:1:exon

WP_002808505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191189-192175:1:exon

PD885_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00810
old locus tag: PD885_00153
so part of: sequence
location: 192192..192461
location: region:192192-192461:1
so has part: feature:192192-192461:1:exon
subclass of: SO_0000010

61892630
type: Gene
SIO_000068: ncbigene

position:192192:1
position: 192192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192461:1
position: 192461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192192-192461:1:exon

PD885_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00810
old locus tag: PD885_00153
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157359.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3253 domain-containing protein
translation: MQQVDDTQIAAVMRALLAHRLPERSICPSEVARAINDDATTWRGLMPQVRTVATDLARKDIVRITQQGDVADLDTARGPIRLMRGSHFE
SIO_010081: PD885_RS00810
subclass of: SO_0000673
so part of: PD885_RS00810
location: 192192..192461
location: region:192192-192461:1
so has part: feature:192192-192461:1:exon

WP_088057090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192192-192461:1:exon

PD885_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00815
old locus tag: PD885_00154
so part of: sequence
location: complement(192612..196304)
location: region:192612-196304:-1
so has part: feature:192612-196304:-1:exon
subclass of: SO_0000010

61892631
type: Gene
SIO_000068: ncbigene

position:192612:-1
position: 192612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196304:-1
position: 196304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192612-196304:-1:exon

PD885_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00815
old locus tag: PD885_00154
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003488440.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: indolepyruvate ferredoxin oxidoreductase family protein
translation: MTSTAALSSTDSANTPELGQVDAHYTLEHKYTRADGRIYLSGVQALVRLPLMQRLRDNAAGLDTAGFISGYRGSPLGGLDLELWRARQHLEAARVTFTPGLNEDLAATMVWGTQQTNLFPGAKVQGVYGMWYGKGPGVDRSGDVFKHGNAAGTSPHGGVLALAADDHACRSSTLPHGSEDEFVSAMMPILNPAGVQDILDMGLLGWAMSRYTGRWIGFKTIAETVESSASVDVDPFARTIVLPDDFALPPGGLSIRWPDPPVDQEMRLHRYAIAAAQAFARANRIDRVVLESPHARLGIVTTGKSYLDVLQALEYLGLDAQACRDIGIRVYKVGMTWPLEPVGISAFAQGLEDIVVVEEKKAFIERQMKELFYNWPASAGARPSIVGKYDEHGAWILPSTGELTPATIAAVIGKRIQRFFTTDSIEQRLRWMDTKEAEMALPRVLFPRVPHYCSGCPHNTSTVVPEGSRALGGIGCHYMVTWMNRATDTFTHMGGEGVTWSGQAPFTDTPHVFQNLGDGTYFHSGSLAIRQSIATGVNITYKVLYNDAVAMTGGQPVDGTLTVPDIAHQLRAEGIHEIAVVSDDIEKWTRRRERFPSEVTFYDRSELDAVQQRLRTVKGVSILIFDQTCATEKRRRRKRGKLIDPPKRVMINSLVCEGCGDCGGKSFCVSVLPKETEFGRKREIDQSNCNKDYSCVSGFCPSFVTVHGGAPRKSKQRDASALLDNLPLPPQRTTLAQPWNILITGVGGTGVVTIGALLGMAGHLEGKGATVLDQTGLAQKGGAVTTHIRIARQPADIHAVRIAAGEADLVLGCDMVVVNDYWALSKVRDGRTQVVLNTYEAMPGSFTTQPDLQFPAAEIIAGVRTALGGREPLLLDATQLATALLGDAIASNLFVLGYAWQHGLVPLSHAALMRAIELNGAAVAMNQQAFAWGRLAAIDLPAVRRAAGLPNVGGSARAHGHTPRAHAPGSWDAHDLSGQGAPRALAQTDGSTLHGDVNAPAHPLDDEQLAQSLDEAIVRRVAFLTEYQDAAYAQRYLALVERVRLQEVRRVPGSSALTQAVARYAFKLMAYKDEYEVARLYTRGDFQRRLQQQFEGHYRLRFHLAPPLLAKKDAHGHLIKRDYGPWMFSVFKLLARLKFLRGGKLDVFGYSAERRGERQLIADYVATVETLLERLDVDNVGLAAQIASIPEHIRGYGHIKHAHLQDAKAREAALMAQWRNPKVLHVVQAA
SIO_010081: PD885_RS00815
subclass of: SO_0000673
so part of: PD885_RS00815
location: complement(192612..196304)
location: region:192612-196304:-1
so has part: feature:192612-196304:-1:exon

WP_002808503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192612-196304:-1:exon

PD885_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00820
pseudo: true
so part of: sequence
location: 196471..197079
location: region:196471-197079:1
so has part: feature:196471-197079:1:exon
subclass of: SO_0000010

61892632
type: Gene
SIO_000068: ncbigene

position:196471:1
position: 196471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197079:1
position: 197079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196471-197079:1:exon

PD885_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008571529.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
SIO_010081: PD885_RS00820
subclass of: SO_0000673
so part of: PD885_RS00820
location: 196471..197079
location: region:196471-197079:1
so has part: feature:196471-197079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196471-197079:1:exon

PD885_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00825
old locus tag: PD885_00156
so part of: sequence
location: 197581..198498
location: region:197581-198498:1
so has part: feature:197581-198498:1:exon
subclass of: SO_0000010

61892633
type: Gene
SIO_000068: ncbigene

position:197581:1
position: 197581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198498:1
position: 198498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197581-198498:1:exon

PD885_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00825
old locus tag: PD885_00156
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014088991.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AEC family transporter
translation: MAVDAFSLILAMLGLGLLFARLRLLPDNSADVLNRVVLYICLPASVLTYVPRLHLEASLGGVIATPWLLTAIIVPLLWGCSRLFGFRREEYAALLMCVVFTNSSFIGFPMVRALIGDQALPYAVVYDQFGTFVLLSTFGLYVLARYSGDTPPTARLILLRVLRFPPLWALLFALTLMPERPPVWIGSGLKSLADAMLPLVMLAVGFSLQLRLPADELKPLAVGLVFKLMVMPILALPLSWALGLHGQMLQTNVLESAMPTMITAAALAISHRLAPRLAAAMVGYSILLSLLTLPAWTWLLAWLVA
SIO_010081: PD885_RS00825
subclass of: SO_0000673
so part of: PD885_RS00825
location: 197581..198498
location: region:197581-198498:1
so has part: feature:197581-198498:1:exon

WP_002808501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197581-198498:1:exon

PD885_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00835
old locus tag: PD885_00157
so part of: sequence
location: 198822..199454
location: region:198822-199454:1
so has part: feature:198822-199454:1:exon
subclass of: SO_0000010

61892634
type: Gene
SIO_000068: ncbigene

position:198822:1
position: 198822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199454:1
position: 199454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198822-199454:1:exon

PD885_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00835
old locus tag: PD885_00157
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017159611.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKTVLVAASKGGVGKTTIATNLAAHAALQGRRTVLADADPQGSSTRWAQRRASLESAVLTIDATRRRNWQAAVPDGTDQLIIDAPAGAMADDLSGFLDHVDAIVVPVLSSALDIEAVVGFLNTLAKVARVHQRKLPVGLVLNRTRSWTQTSQQAAEMIGAWPYPLVTQLRDTQAYVVMAGLGRSLFDYRSAQVRDHQQDWEPLFKWLKKA
SIO_010081: PD885_RS00835
subclass of: SO_0000673
so part of: PD885_RS00835
location: 198822..199454
location: region:198822-199454:1
so has part: feature:198822-199454:1:exon

WP_002808500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198822-199454:1:exon

PD885_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00840
old locus tag: PD885_00158
so part of: sequence
location: 199468..199944
location: region:199468-199944:1
so has part: feature:199468-199944:1:exon
subclass of: SO_0000010

61892635
type: Gene
SIO_000068: ncbigene

position:199468:1
position: 199468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199944:1
position: 199944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199468-199944:1:exon

PD885_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00840
old locus tag: PD885_00158
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035432.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine phosphatase family protein
translation: MRELILLRHAHAEPADTGQADFDRPLSPHGIAEAEAAGRWLCEQRLVPDRVLCSPARRARETLEAVLELTGYIEQKLDERIYEATPGALASLVDEHREAERLLLVGHNPGLERLAALMHSGQTGDYRGMPTASIALLALPLDATIEPGIARLTAFWWP
SIO_010081: PD885_RS00840
subclass of: SO_0000673
so part of: PD885_RS00840
location: 199468..199944
location: region:199468-199944:1
so has part: feature:199468-199944:1:exon

WP_002808499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199468-199944:1:exon

PD885_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00845
old locus tag: PD885_00159
so part of: sequence
location: 199948..200520
location: region:199948-200520:1
so has part: feature:199948-200520:1:exon
subclass of: SO_0000010

61892636
type: Gene
SIO_000068: ncbigene

position:199948:1
position: 199948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200520:1
position: 200520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199948-200520:1:exon

PD885_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00845
old locus tag: PD885_00159
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003488454.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YceI family protein
translation: MSTSLRWYAWLALWVVFPCMAQQKVHSIDPVQSCFGFEIRTRFGMKIEGFFPRFRGDVLELPDGRQQVRFRLDATQVEIPGKDRYTSWMRGEDFFDVAQYPVVEFDSLPYTDEVAKHGGDITGNLTIRGITHVETLHVVPAECARPGYDCDVISRGTVLRGRYGMNAWEMALGDRVTFTLRGRLQEARRP
SIO_010081: PD885_RS00845
subclass of: SO_0000673
so part of: PD885_RS00845
location: 199948..200520
location: region:199948-200520:1
so has part: feature:199948-200520:1:exon

WP_002808498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199948-200520:1:exon

PD885_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00850
old locus tag: PD885_00160
so part of: sequence
location: 200517..202535
location: region:200517-202535:1
so has part: feature:200517-202535:1:exon
subclass of: SO_0000010

61892637
type: Gene
SIO_000068: ncbigene

position:200517:1
position: 200517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202535:1
position: 202535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200517-202535:1:exon

PD885_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00850
old locus tag: PD885_00160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005921165.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipase D family protein
translation: MRFLLRILVLATLLLGTGCAGLSRIERNRAAGVAAAARSTAVSCTQANRCAQPSPLRALGGEAITASTPAAPRHYATIVDHGEESLVARLNLIRSATRSVDLQTYIFDKDDSARMVLDALINAAQRGVKVRILIDQLSAIADLQILGALSSTHENLQLRIYNPTFGKVKLNYFDYASSVVCCFRRFNQRMHNKLLVVDDVLGMVGGRNYQDDYFDWDSEYNFRDRDVILAGPEVRAMAANFDAFWRAKRSVPAERLNDVGRLLLEQGAPKMPPANFRRPDRVARVDREAHDPQFVRDAFVTPAMPVQRVLYAADLPQKHRKEHAARAVSTAPELDSLIAGAQQEVLLQTPYLVLSDEAQAIFRDLRRHPQPPRIVVSTNSLAATDNPIVYALSYKFKRRNMRQLGFNVYEFKPFPLDAPVDYANLVPDPLNPEPEPASDDSRANRVIGGSAAGNAMRGSSGGGDGDGITGNAIRGSGAGRAPGGSRVERRVLRTETRPSFLGTRAVNKPLPVTRAGARMGLHAKSLVVDRRIGVIGTHNFDPRSENYNTEAAVVIDDARFAQALAASIERDISPENAWTVASREKSQVLSGLNDSVGKMSEALPVLDVWPWRYATNYQFQPGPNCPFPLKRQDPQFRQCYVAVGDFPEVNVGPKWLLVRMLTAFGAGLVPIL
SIO_010081: PD885_RS00850
subclass of: SO_0000673
so part of: PD885_RS00850
location: 200517..202535
location: region:200517-202535:1
so has part: feature:200517-202535:1:exon

WP_002808497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200517-202535:1:exon

PD885_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00855
old locus tag: PD885_00161
so part of: sequence
location: 202816..203244
location: region:202816-203244:1
so has part: feature:202816-203244:1:exon
subclass of: SO_0000010

61892638
type: Gene
SIO_000068: ncbigene

position:202816:1
position: 202816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203244:1
position: 203244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202816-203244:1:exon

PD885_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00855
old locus tag: PD885_00161
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157352.1
GO function: GO:0016790 - thiolester hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hotdog fold thioesterase
translation: MTFREPVDLAALTASSRDTLIEHLGIVFTEAGDDWLRATMPVDARTRQPYGLLHGGASVVLAETLGSSAGNLCVDMTTHMCVGLEINANHLRAAYQDLVTGTARAVHVGRSTQVWDITIENPAGKRVCISRLTLAVVPRTNG
SIO_010081: PD885_RS00855
subclass of: SO_0000673
so part of: PD885_RS00855
location: 202816..203244
location: region:202816-203244:1
so has part: feature:202816-203244:1:exon

WP_002808495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202816-203244:1:exon

PD885_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00860
old locus tag: PD885_00162
so part of: sequence
location: 203266..204165
location: region:203266-204165:1
so has part: feature:203266-204165:1:exon
subclass of: SO_0000010

61892639
type: Gene
SIO_000068: ncbigene

position:203266:1
position: 203266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204165:1
position: 204165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203266-204165:1:exon

PD885_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00860
old locus tag: PD885_00162
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016851587.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysophospholipid acyltransferase family protein
translation: MEQRHPLPALRSGRAAVKIVAPLSPVTGPVRRMSESSLDATRDAGGAWRWFRYLYRVPLLLLHLSICLPITMLCVAAPALARIRTGRDDTLDERMTRWWQGNLMRIFGFRLRRLGTPLPGAVLFVANHVSWVDISMLHSQRVMGFVAKREIAAWPLIGWLATKGQTIFHQRGNTESLGGVLHQMLQRLQSGKPVGVFPEGRTYGGTEVGPFHARLFQAAVESGVPVQPVALRYGVRGNAQAVVAFGECESFFANIVRVLGEPSRLAEVHFLEPIRGFDIEGRRRLADTSRQRIIAAMAS
SIO_010081: PD885_RS00860
subclass of: SO_0000673
so part of: PD885_RS00860
location: 203266..204165
location: region:203266-204165:1
so has part: feature:203266-204165:1:exon

WP_172402105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203266-204165:1:exon

PD885_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00865
old locus tag: PD885_00163
pseudo: true
so part of: sequence
location: 204229..>205200
location: region:204229-205200:1
so has part: feature:204229-205200:1:exon
subclass of: SO_0000010

61892640
type: Gene
SIO_000068: ncbigene

position:204229:1
position: 204229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205200:1
position: 205200
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204229-205200:1:exon

PD885_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00865
old locus tag: PD885_00163
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157351.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: alpha/beta fold hydrolase
SIO_010081: PD885_RS00865
subclass of: SO_0000673
so part of: PD885_RS00865
location: 204229..>205200
location: region:204229-205200:1
so has part: feature:204229-205200:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204229-205200:1:exon

PD885_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00870
so part of: sequence
location: complement(205221..205296)
location: region:205221-205296:-1
so has part: feature:205221-205296:-1:exon
subclass of: SO_0000011

61892641
type: Gene
SIO_000068: ncbigene

position:205221:-1
position: 205221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205296:-1
position: 205296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205221-205296:-1:exon

PD885_RS00870
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 48664
nc RNA class: other
locus tag: PD885_RS00870
product: sX9 sRNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02228
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: PD885_RS00870
subclass of: SO_0000673
so part of: PD885_RS00870
location: complement(205221..205296)
location: region:205221-205296:-1
so has part: feature:205221-205296:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205221-205296:-1:exon

PD885_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00875
old locus tag: PD885_00164
so part of: sequence
location: 205413..207485
location: region:205413-207485:1
so has part: feature:205413-207485:1:exon
subclass of: SO_0000010

61892642
type: Gene
SIO_000068: ncbigene

position:205413:1
position: 205413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207485:1
position: 207485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205413-207485:1:exon

PD885_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00875
old locus tag: PD885_00164
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019184912.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MQDAILQALRRNAADDAVALAREWAMTAPDTAAAHRWLGLALQQQGQPRLALASLDTALTLTPEDADLHLLRAGVLLDTRDLSAADAALLRTTALDPNQFNAYVMQAHLAVARGDLDEAERLSRTAARLAPEHPQLLAVDGVVEMRRGQSDRALSLLTRAAEQLPDDAQVLFSLGFAYLQKEHLAFAERAFERVIELTPPGTALRAFIAQLAQRQGRLDDALSAMHGVLAQPDGDIPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALLTAWERLGALDDARDTLDAALATSANAHDLWLARLAVEPVGGPQAQVVIERWLLAMPEHLPALEALMRVHDMQGHADAAEMVARQIVAVEPGHISGEQRIVEALLERDPAAAIACVQSMIDSLPEPQQTVLRPWLGNVQDRADQPDAALATWMQFQREQAQHRLLLPPQAAKQPMQWPALGTIPDTVTARPLFVWGTPGSHVERLIAVMGAATPLVRGDRYGTTPPSDALQSYRTVEQLASGQLAPMALVEGWKAQLPRRGIDDGNVIDWLLWWDNTLLTALRPHLPEGRLAIALRDPRDMLLDWLSAGAPAPLAVQSPQQATDWLLAALEQLAVLHERDLYSHRIIRLDGIESDPQGISTALEQAFGLSFPLVEPRGPARLAPGRWRNYRGVLGAQFDLLTSMAVRFGYPQK
SIO_010081: PD885_RS00875
subclass of: SO_0000673
so part of: PD885_RS00875
location: 205413..207485
location: region:205413-207485:1
so has part: feature:205413-207485:1:exon

WP_002808490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205413-207485:1:exon

PD885_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00880
pseudo: true
so part of: sequence
location: 207978..208734
location: region:207978-208734:1
so has part: feature:207978-208734:1:exon
subclass of: SO_0000010

61892643
type: Gene
SIO_000068: ncbigene

position:207978:1
position: 207978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208734:1
position: 208734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207978-208734:1:exon

PD885_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002802850.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: PD885_RS00880
subclass of: SO_0000673
so part of: PD885_RS00880
location: 207978..208734
location: region:207978-208734:1
so has part: feature:207978-208734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207978-208734:1:exon

PD885_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00885
old locus tag: PD885_00167
so part of: sequence
location: complement(208763..209422)
location: region:208763-209422:-1
so has part: feature:208763-209422:-1:exon
subclass of: SO_0000010

61892644
type: Gene
SIO_000068: ncbigene

position:208763:-1
position: 208763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209422:-1
position: 209422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208763-209422:-1:exon

PD885_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00885
old locus tag: PD885_00167
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014088999.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: superoxide dismutase family protein
translation: MRILPTTLFLATALVLTSCKREEPAPADPAPAPAPAPQASTPAEAAHVGEHAASMVTEAAATTTATAELQPTKGNEVKGTVRFKTVDGALRVTGQLSGLKPNTEHGFHIHEKGDCSAPDGSSAGGHLNPAQSDHGNVTADPHHGGDMPNIKADAQGNARIDGPVSSNVNLGKADQFDIAGHAVIVHANADDYKTQPTGNAGGRLACGVITTDNAQAATK
SIO_010081: PD885_RS00885
subclass of: SO_0000673
so part of: PD885_RS00885
location: complement(208763..209422)
location: region:208763-209422:-1
so has part: feature:208763-209422:-1:exon

WP_088056610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208763-209422:-1:exon

PD885_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00890
old locus tag: PD885_00168
so part of: sequence
location: complement(209471..210070)
location: region:209471-210070:-1
so has part: feature:209471-210070:-1:exon
subclass of: SO_0000010

61892645
type: Gene
SIO_000068: ncbigene

position:209471:-1
position: 209471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210070:-1
position: 210070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209471-210070:-1:exon

PD885_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00890
old locus tag: PD885_00168
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017165149.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: superoxide dismutase family protein
translation: MPHRSSTIIGFTALALAACSSTPPTPPPPPQAMRVVPTRPVQQAEAALASASGSLVSGRVVLVPALRGIRITGTVGGLRPGGVAGFHVHERGDCSAADASSAGAHFNPTGAPHGRSGDGAHHLGDMDNLRADAEGVAHLDMIVSGISLGDAAPTDVIGKSLIVHADSDDYRSQPSGNAGARLACGVIRVAKSRTSPSQP
SIO_010081: PD885_RS00890
subclass of: SO_0000673
so part of: PD885_RS00890
location: complement(209471..210070)
location: region:209471-210070:-1
so has part: feature:209471-210070:-1:exon

WP_002808487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209471-210070:-1:exon

PD885_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: ntrC
locus tag: PD885_RS00895
old locus tag: PD885_00169
so part of: sequence
location: complement(210416..211846)
location: region:210416-211846:-1
so has part: feature:210416-211846:-1:exon
subclass of: SO_0000010

61892646
type: Gene
SIO_000068: ncbigene

position:210416:-1
position: 210416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211846:-1
position: 211846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210416-211846:-1:exon

PD885_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: ntrC
locus tag: PD885_RS00895
old locus tag: PD885_00169
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005921161.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogen regulation protein NR(I)
translation: MAEAAAASHRIWVVDDDRSVRFVLSTALRDAGYAVDGFDSAAAALQALAMRPTPDLLFTDVRMPGEDGLILLDKLKSKHPQLPVIVMSAYTDVTSTAGAFRGGAHEFLSKPFDLDDAVALAARALPDADAGVDEIVGTRLAEGSASLIGDTPAMQALFRAIGRLAQAPLSVLINGETGTGKELVARALHNESPRSRKPFVALNTAAIPAELLESELFGHETGAFTGATKRHIGRFEQADGGTLFLDEIGDMPLPLQTRLLRVLAENEFFRVGGRELIRVDVRVIAATHQDLEALVEQGRFRADLLHRLDVVRLQLPPLRERRGDIAQLAENFLAMAGRKLDMLPKRLSSAALEDLRQYDWPGNVRELENVCWRLAALATADIIDVIDVEAALARGGRRHRGGRSDGQWDQMLSSWAAQRLSEGAQGLHAEARERLDKTLLETALQLTQGRRAEAAARLGLGRNTVTRKLGPGRKRR
SIO_010081: PD885_RS00895
subclass of: SO_0000673
so part of: PD885_RS00895
location: complement(210416..211846)
location: region:210416-211846:-1
so has part: feature:210416-211846:-1:exon

WP_002808483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210416-211846:-1:exon

PD885_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00900
old locus tag: PD885_00170
so part of: sequence
location: complement(211839..212894)
location: region:211839-212894:-1
so has part: feature:211839-212894:-1:exon
subclass of: SO_0000010

61892647
type: Gene
SIO_000068: ncbigene

position:211839:-1
position: 211839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212894:-1
position: 212894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211839-212894:-1:exon

PD885_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00900
old locus tag: PD885_00170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016850649.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MVISAPMPSLDSLGTPVAWADRQGRVLGVNPAFARWLGVSARRLLDQPLARLEVQGDALARFLLNDERDVLRLHRLALGLPNDAPRFAEGWLSRLDDGGWLLETHPVDEFPALDPTHALPNALSAALKGLAHELRNPLAGLKGAAQLLARRSAGRDEDERELIELIGTEIERLNTLLDRLLSPTPARPHDRLNIHVVLERVLRLAEAEGVWSVQVRRDYDPSIPDILGDGDRLTQAVWNLVRNAFQAGAMRVTLRTRVEHGQRIRDRVHAMSLRLEIIDDGGGVPDELAEHLFLPLVSGRAEGSGLGLALAQQVSREHHGTLTYRSRPGHTVFTLLLPELAGDHHKEHLHG
SIO_010081: PD885_RS00900
subclass of: SO_0000673
so part of: PD885_RS00900
location: complement(211839..212894)
location: region:211839-212894:-1
so has part: feature:211839-212894:-1:exon

WP_002808482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211839-212894:-1:exon

PD885_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00905
old locus tag: PD885_00171
so part of: sequence
location: complement(213160..214602)
location: region:213160-214602:-1
so has part: feature:213160-214602:-1:exon
subclass of: SO_0000010

61892648
type: Gene
SIO_000068: ncbigene

position:213160:-1
position: 213160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214602:-1
position: 214602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213160-214602:-1:exon

PD885_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00905
old locus tag: PD885_00171
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019237112.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ammonium transporter
translation: MKTSLFAGWKAWFYSVCMLMLFSALVVGGMGNAYAQSTPQVTPLPTEPVTTEPLPTAQPGAAPVAAAEAAPVVEKGDVAWMLTSTLLVLLMVVPGLALFYGGMVRAKNVLSVLIQVAVVFSLLTILWVVYGYSLAFSGEGPWIGNLDKALLKGVTIETLAATFTKGVSLPEYVFVVFQATFAGITGALIVGAFAERAKFAAVLLFSVIWFTFGYLPLAHMVWATGGYLFGLGALDFAGGTVVHINAGIAGLVGAYFVGKRAGLGREAIKPHNVTLTFVGASLLWVGWFGFNAGSNLEANAGAALAFLNTLLATAAAILGWSLTEKIIKGKSSALGVASGMVAGLVGITPACGTVGPFGAIVIGLAAGVLCVWGVTGLKRMLGADDSLDVFGVHGLGGIIGAILTGVFSAASLGGQKGGDYDIVHQVGIQTLGVGITLVWIGVVSVVGFLVAKLVFGLRVTEEAEREGLDITSHGEAAYES
SIO_010081: PD885_RS00905
subclass of: SO_0000673
so part of: PD885_RS00905
location: complement(213160..214602)
location: region:213160-214602:-1
so has part: feature:213160-214602:-1:exon

WP_040762636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213160-214602:-1:exon

PD885_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00910
old locus tag: PD885_00172
so part of: sequence
location: complement(214625..214963)
location: region:214625-214963:-1
so has part: feature:214625-214963:-1:exon
subclass of: SO_0000010

61892649
type: Gene
SIO_000068: ncbigene

position:214625:-1
position: 214625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214963:-1
position: 214963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214625-214963:-1:exon

PD885_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00910
old locus tag: PD885_00172
inference: COORDINATES: similar to AA sequence:RefSeq:YP_004997399.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-II family nitrogen regulator
translation: MKLITAIIRPFKLDEVREALSAAGVSGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKIKIETVVTDDRLDAVVEAIQNAAGTGKIGDGKIFVTAIEQVVRIRTGEIGADAL
SIO_010081: PD885_RS00910
subclass of: SO_0000673
so part of: PD885_RS00910
location: complement(214625..214963)
location: region:214625-214963:-1
so has part: feature:214625-214963:-1:exon

WP_002808480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214625-214963:-1:exon

PD885_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: glnA
locus tag: PD885_RS00915
old locus tag: PD885_00173
so part of: sequence
location: complement(215237..216646)
location: region:215237-216646:-1
so has part: feature:215237-216646:-1:exon
subclass of: SO_0000010

61892650
type: Gene
SIO_000068: ncbigene

position:215237:-1
position: 215237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216646:-1
position: 216646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215237-216646:-1:exon

PD885_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: glnA
locus tag: PD885_RS00915
old locus tag: PD885_00173
EC number: 6.3.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157345.1
GO function: GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO process: GO:0006542 - glutamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I glutamate--ammonia ligase
translation: MSVENVEKLIKDNKVEFVDLRFVDMRGVQQHITFPANIIGPALFEEGKMFDGSSIAGWKGINESDMVLLPDAATAYLDPFFADPTIVLTCDILDPATMQSYERDPRGIAKRAEAYLKSSGTADQAFFGPEPEFFIFDSVRFANDMGHTFFQVGSEEAAWNTGAKYDGSNSGYRPGVKGGYFPVPPTDTLHDLRAEMIKTLEQVGIETEVHHHEVATAGQCEIGTKFSSLVQKADELLTMKYIIKNVAYRNGKTVTFMPKPIVGDNGSGMHVHQSLAKGGANLFSGDGYGGLSQMALWYIGGIFKHARAINAFANSGTNSYKRLVPGFEAPVMLAYSARNRSASCRIPWVTNPKARRIEMRFPDPLQSGYLTFTALLMAGLDGIKNQIDPGAPSDKDLYDLPPEEEKLIPQVCSSLDQALEALDKDREFLKAGGVMSDDFIDGYIALKMQEVTKFRAATHPLEYQLYYGN
SIO_010081: PD885_RS00915
subclass of: SO_0000673
so part of: PD885_RS00915
location: complement(215237..216646)
location: region:215237-216646:-1
so has part: feature:215237-216646:-1:exon

WP_002808479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215237-216646:-1:exon

PD885_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00920
old locus tag: PD885_00174
so part of: sequence
location: 216869..217663
location: region:216869-217663:1
so has part: feature:216869-217663:1:exon
subclass of: SO_0000010

61892651
type: Gene
SIO_000068: ncbigene

position:216869:1
position: 216869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217663:1
position: 217663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216869-217663:1:exon

PD885_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00920
old locus tag: PD885_00174
EC number: 3.6.1.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016903412.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO process: GO:0016311 - dephosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyl-diphosphate phosphatase
translation: MSDLISALLLGILEGLTEFLPISSTGHLLIAEQWLGHRSDFFNIVIQAGAILAICLALRQKLWTLATGLGERENRDYVLKIGVAFMVTAVVGLIVRKAGWQLPETVHPVAWALLIGGLWMLVAEHFADKLPERDVVTWKVAIAVGLAQVVAGVFPGTSRSASAIFLAMLLGLSKRSAAADFVFMVGIPTMFAASGYALLEMYKEGGFGAENWADVAVAFVAATITGFVVVKWLLGYIKKHRFTVFAIYRIVLGVALLLWLPAVA
SIO_010081: PD885_RS00920
subclass of: SO_0000673
so part of: PD885_RS00920
location: 216869..217663
location: region:216869-217663:1
so has part: feature:216869-217663:1:exon

WP_002808478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216869-217663:1:exon

PD885_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00925
old locus tag: PD885_00175
pseudo: true
so part of: sequence
location: 217798..>218091
location: region:217798-218091:1
so has part: feature:217798-218091:1:exon
subclass of: SO_0000010

61892652
type: Gene
SIO_000068: ncbigene

position:217798:1
position: 217798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218091:1
position: 218091
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217798-218091:1:exon

PD885_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00925
old locus tag: PD885_00175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005930695.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: PD885_RS00925
subclass of: SO_0000673
so part of: PD885_RS00925
location: 217798..>218091
location: region:217798-218091:1
so has part: feature:217798-218091:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217798-218091:1:exon

PD885_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00930
pseudo: true
so part of: sequence
location: complement(218115..219398)
location: region:218115-219398:-1
so has part: feature:218115-219398:-1:exon
subclass of: SO_0000010

61892653
type: Gene
SIO_000068: ncbigene

position:218115:-1
position: 218115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219398:-1
position: 219398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218115-219398:-1:exon

PD885_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035783.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: PD885_RS00930
subclass of: SO_0000673
so part of: PD885_RS00930
location: complement(218115..219398)
location: region:218115-219398:-1
so has part: feature:218115-219398:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:218115-219398:-1:exon

PD885_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00935
pseudo: true
so part of: sequence
location: <219516..220064
location: region:219516-220064:1
so has part: feature:219516-220064:1:exon
subclass of: SO_0000010

61892654
type: Gene
SIO_000068: ncbigene

position:219516:1
position: 219516
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:220064:1
position: 220064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219516-220064:1:exon

PD885_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005921163.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF4377 domain-containing protein
SIO_010081: PD885_RS00935
subclass of: SO_0000673
so part of: PD885_RS00935
location: <219516..220064
location: region:219516-220064:1
so has part: feature:219516-220064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219516-220064:1:exon

PD885_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00940
old locus tag: PD885_00179
so part of: sequence
location: complement(220098..220451)
location: region:220098-220451:-1
so has part: feature:220098-220451:-1:exon
subclass of: SO_0000010

61892655
type: Gene
SIO_000068: ncbigene

position:220098:-1
position: 220098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220451:-1
position: 220451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220098-220451:-1:exon

PD885_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00940
old locus tag: PD885_00179
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRWIWTLVAAVGLQTTATASTPHTTLVCRMDDPFLFCSKGCDTSDYNWKPVDPISGTWEAVSPYCPFPTPTSTNYCAGWTMKAITALSQYETICPGAVKEGKWKGTRQPELVPFKH
SIO_010081: PD885_RS00940
subclass of: SO_0000673
so part of: PD885_RS00940
location: complement(220098..220451)
location: region:220098-220451:-1
so has part: feature:220098-220451:-1:exon

WP_002808474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220098-220451:-1:exon

PD885_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00945
so part of: sequence
location: 220763..220837
location: region:220763-220837:1
so has part: feature:220763-220837:1:exon
subclass of: SO_0000011

61892656
type: Gene
SIO_000068: ncbigene

position:220763:1
position: 220763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220837:1
position: 220837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220763-220837:1:exon

PD885_RS00945
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 48664
nc RNA class: other
locus tag: PD885_RS00945
product: sX9 sRNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02228
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: PD885_RS00945
subclass of: SO_0000673
so part of: PD885_RS00945
location: 220763..220837
location: region:220763-220837:1
so has part: feature:220763-220837:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220763-220837:1:exon

PD885_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00950
old locus tag: PD885_00180
pseudo: true
so part of: sequence
location: 220965..222333
location: region:220965-222333:1
so has part: feature:220965-222333:1:exon
subclass of: SO_0000010

61892657
type: Gene
SIO_000068: ncbigene

position:220965:1
position: 220965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222333:1
position: 222333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220965-222333:1:exon

PD885_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00950
old locus tag: PD885_00180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035783.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: PD885_RS00950
subclass of: SO_0000673
so part of: PD885_RS00950
location: 220965..222333
location: region:220965-222333:1
so has part: feature:220965-222333:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220965-222333:1:exon

PD885_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00955
old locus tag: PD885_00181
so part of: sequence
location: complement(222442..222900)
location: region:222442-222900:-1
so has part: feature:222442-222900:-1:exon
subclass of: SO_0000010

61892658
type: Gene
SIO_000068: ncbigene

position:222442:-1
position: 222442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222900:-1
position: 222900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222442-222900:-1:exon

PD885_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00955
old locus tag: PD885_00181
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014505066.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKHVVIAAALTMLLASCASSSKVMLGRARAPIDPAQVQVYSNAPVGSVEIAQLESTSAAGFGTQGQTDAAVQRLKREAAKLGANGVVIVGVGSERSGGGLSVGGGSYGGHVGGGLGIGIPTTQKHAAGLAIWVPAQAQAPQSTQPLPPQER
SIO_010081: PD885_RS00955
subclass of: SO_0000673
so part of: PD885_RS00955
location: complement(222442..222900)
location: region:222442-222900:-1
so has part: feature:222442-222900:-1:exon

WP_002808472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222442-222900:-1:exon

PD885_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00960
old locus tag: PD885_00182
so part of: sequence
location: 223107..223349
location: region:223107-223349:1
so has part: feature:223107-223349:1:exon
subclass of: SO_0000010

61892659
type: Gene
SIO_000068: ncbigene

position:223107:1
position: 223107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223349:1
position: 223349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223107-223349:1:exon

PD885_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00960
old locus tag: PD885_00182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005916515.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MISLLWGIVALAWMMLAFIPFLGWGNWFLIPFAAVGAVIAAIAVLLTSAGNRGRAKTGLLLNGLVIVVGVIRLSLGGGVI
SIO_010081: PD885_RS00960
subclass of: SO_0000673
so part of: PD885_RS00960
location: 223107..223349
location: region:223107-223349:1
so has part: feature:223107-223349:1:exon

WP_172402139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223107-223349:1:exon

PD885_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: hemB
locus tag: PD885_RS00965
old locus tag: PD885_00183
so part of: sequence
location: 223496..224485
location: region:223496-224485:1
so has part: feature:223496-224485:1:exon
subclass of: SO_0000010

61892660
type: Gene
SIO_000068: ncbigene

position:223496:1
position: 223496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224485:1
position: 224485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223496-224485:1:exon

PD885_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: hemB
locus tag: PD885_RS00965
old locus tag: PD885_00183
EC number: 4.2.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014506206.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO process: GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: porphobilinogen synthase
translation: MAHPHYRPRRMRHDAFSRRLMRENTLTTDDLIWPVFVHELSGRAPIASMPGVARLSLDELLREAEAALELGIPVIDLFPVIDPSGKSLDASEAWNPDGLAQRAVRALKARFPELGVMTDVALDPYTTHGQDGIIDDKGYVLNEITVEALVKQSLSHAQAGVDIISPSDMMDGRIGAIRRALDADDHLDVRIMAYSAKYASAFYGPFRDAVGSAGNLGKADKTTYQMDPANSDEAMREIALDLEEGADMVMVKPGMPYLDVVRRVKEEFRVPTFAYQVSGEYAMLKAAAANGWLDERMCVLEALMAFKRAGADGVLTYFAPQVARWMREG
SIO_010081: PD885_RS00965
subclass of: SO_0000673
so part of: PD885_RS00965
location: 223496..224485
location: region:223496-224485:1
so has part: feature:223496-224485:1:exon

WP_002808469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223496-224485:1:exon

PD885_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00970
old locus tag: PD885_00184
so part of: sequence
location: 224759..227278
location: region:224759-227278:1
so has part: feature:224759-227278:1:exon
subclass of: SO_0000010

61892661
type: Gene
SIO_000068: ncbigene

position:224759:1
position: 224759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227278:1
position: 227278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224759-227278:1:exon

PD885_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00970
old locus tag: PD885_00184
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005916508.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfite reductase flavoprotein subunit alpha
translation: MLKTVLFQLHWLLGITASLVLSVMGLTGALMSFENEILRLANPAIAQLADRQAAGERALPVDVLVQRLDLGRQQAITRMLIDPTGARPSTARLAGKGGGRVYFDPYTGEKVAAPRLSDAFAFIEDLHRHLTAGKRGQAVTGASTLILLFLCASGLYLRWPRRWWRLRTWWAVEWRRQGRSFLWSLHAVLGTWCLLVYLLVALTGLTWSYTWYRDGMMALLGKEPAMRGDGRDHRAVTVDFARVQRILDGIAGTRSTALDVRLPTRAGQPLSVRFLPNDPDHDRAYDTVEIEPGSGALLRRQDYALLPRGQQLLVSMFSLHSGSFFGLPGRILVMLASAGMSVFFVTGWMLYLDRRRKKCALRAAREVLQSTPPASQAEPWLVGFASQSGFAERLAWQAAGHLQAAGLPVQVRSLAQLQAQDLQGTRHALFVVSTFGDGEPPDAARGFERAVLRQRLALPQLAYAVLALGDRQYAQFCGFSRRIEQWLNAQGARPLFPAVEMDNTDPQALAQWHAQLEQIAGAPVTAVPLTRPILTEWTLSSRTHLNPGSEGAPIWRIDLQPPAGAQWQAGDILEVQPAHAYAHVRACLVGWGLPPDALVHVNAQLLPLQQAAAERVLPEPPTRPPTPQPDPQAWLDACAWLPTRDYSLASVPADGTAMAVVRLTTRADGNPGLGSGWLICHAPTGAPVRARLRRNPGFHRVASAPMLLIGNGTGIAGLRGLLRDAELAGAHGHWLLFGERHAAHDALFADELQAWQASGHLQQLDWVFSRDQAHKRYVQHQLRDAGDAPRHWIDRGAVIYVCGSLNSMAREVDATLRELLGGARLEALTAAGRYRRDVY
SIO_010081: PD885_RS00970
subclass of: SO_0000673
so part of: PD885_RS00970
location: 224759..227278
location: region:224759-227278:1
so has part: feature:224759-227278:1:exon

WP_002808468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224759-227278:1:exon

PD885_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00975
old locus tag: PD885_00185
pseudo: true
so part of: sequence
location: complement(<227446..227589)
location: region:227446-227589:-1
so has part: feature:227446-227589:-1:exon
subclass of: SO_0000010

61892662
type: Gene
SIO_000068: ncbigene

position:227446:-1
position: 227446
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:227589:-1
position: 227589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227446-227589:-1:exon

PD885_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00975
old locus tag: PD885_00185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017156261.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: TolB-like protein
SIO_010081: PD885_RS00975
subclass of: SO_0000673
so part of: PD885_RS00975
location: complement(<227446..227589)
location: region:227446-227589:-1
so has part: feature:227446-227589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227446-227589:-1:exon

PD885_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: aroE
locus tag: PD885_RS00980
old locus tag: PD885_00186
so part of: sequence
location: 227641..228492
location: region:227641-228492:1
so has part: feature:227641-228492:1:exon
subclass of: SO_0000010

61892663
type: Gene
SIO_000068: ncbigene

position:227641:1
position: 227641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228492:1
position: 228492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227641-228492:1:exon

PD885_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: aroE
locus tag: PD885_RS00980
old locus tag: PD885_00186
EC number: 1.1.1.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011257342.1
GO function: GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO process: GO:0019632 - shikimate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: shikimate dehydrogenase
translation: MPVSRYAVFGHPVAHSLSPAIHADFGKQTGIALDYTAIDAPPEEFSAALQRFADEGGKGANVTLPLKEAACALSNSVSDRARLAGAVNTLVRNDGQWQGDNTDGVGLVRDLTDRHGLDLRGRRVLLLGAGGAARGVAPALLEAGITEMVAVNRSPERADALCDALGEPGRVVSRYIEDLRDLGDFELIVNATAAGRDRDAGAFALPLGLVNSLTAAVDLNYGATAIAFLAWARAAQCRYAIDGLGMLVEQAAVSFSLWHGVRPDTDPVYAALRAREAVLISAD
SIO_010081: PD885_RS00980
subclass of: SO_0000673
so part of: PD885_RS00980
location: 227641..228492
location: region:227641-228492:1
so has part: feature:227641-228492:1:exon

WP_002808466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227641-228492:1:exon

PD885_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS00985
old locus tag: PD885_00187
so part of: sequence
location: 228482..228856
location: region:228482-228856:1
so has part: feature:228482-228856:1:exon
subclass of: SO_0000010

61892664
type: Gene
SIO_000068: ncbigene

position:228482:1
position: 228482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228856:1
position: 228856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228482-228856:1:exon

PD885_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS00985
old locus tag: PD885_00187
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016902791.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPIESGSVTTTDILLTLVTSLLSRVPLLIALLLGLVLLWRAPHGPLRRAGLAALWLLLGCLLAEAALQAIPMLLLQQGNVRQISVVMGVGRFALTAVQGVGIGVLVWTLARSLQRLPPARDTCA
SIO_010081: PD885_RS00985
subclass of: SO_0000673
so part of: PD885_RS00985
location: 228482..228856
location: region:228482-228856:1
so has part: feature:228482-228856:1:exon

WP_040762635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228482-228856:1:exon

PD885_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: dinG
locus tag: PD885_RS00990
old locus tag: PD885_00188
so part of: sequence
location: 229115..231259
location: region:229115-231259:1
so has part: feature:229115-231259:1:exon
subclass of: SO_0000010

61892665
type: Gene
SIO_000068: ncbigene

position:229115:1
position: 229115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231259:1
position: 231259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229115-231259:1:exon

PD885_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: dinG
locus tag: PD885_RS00990
old locus tag: PD885_00188
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007973427.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
GO process: GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent DNA helicase DinG
translation: MSEVAPPAAPSAPVPPAPTQRSLTEPVKAGIREAYAKLQANTPGFATRRAQSQMIGLVSRALATSGGIGIAEAPTGVGKSLGYLTAGVPIALATKKKLVISTGTVALQSQLVERDIPAFLKATGLEATVALAKGRTRYLCTRNAAELQGETSQEGMFDDEQVLYDRPLSPADADLAKRLANAYAERSWNGDLDDAPEQISVPLRLRITTPASGCAGRRCSYAAQCPVLKARTEVREAQIVVTNHALLLSSLSLGDAENGQPLIAPPADMLLVLDEGHHIAGVAIDQGAANLSLDEMAKRTGRLQILIAAAYRAVDKDKIGNLLPNEAIEVAARLSKLLKAFHAEVERLWKPELGERDPLWRAANGKLPPQWGPVIEELGEETRALFNWVHAAHSAIAKGKQDDSARERLQRSLGLALEMAEQQHNLWSGWRREDKQGQPPMARWITLSRDGDLICHCSPVSAAQVLRTMIWNEVDSVVMTSATLTGGGDFQSFAINNGLPDHAEMASLASPFDLPNQAELIVPDFPVTPDDREGHPKEVARYLVSELDWTSKGSIVLFTSRWKMEKVADLMPLAQRNRVLVQGEGNKSQLITEHLRRIAAGEGSVLFGLNSFGEGLDLPGDACTTVVITQVPFAVPTDPQTSTLSEWLESRGHNAFNLIAIPHALRTLTQFAGRLIRSSNDHGRVIILDSRLLTRRYGKRIIDALPPFKRVIGR
SIO_010081: PD885_RS00990
subclass of: SO_0000673
so part of: PD885_RS00990
location: 229115..231259
location: region:229115-231259:1
so has part: feature:229115-231259:1:exon

WP_002808464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229115-231259:1:exon

PD885_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: katB
locus tag: PD885_RS00995
old locus tag: PD885_00189
so part of: sequence
location: 231769..233292
location: region:231769-233292:1
so has part: feature:231769-233292:1:exon
subclass of: SO_0000010

61892666
type: Gene
SIO_000068: ncbigene

position:231769:1
position: 231769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233292:1
position: 233292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231769-233292:1:exon

PD885_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: katB
locus tag: PD885_RS00995
old locus tag: PD885_00189
EC number: 1.11.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011257350.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: catalase KatB
translation: MRPGFLTVLVLLAPALIALPVFAQSVLTRDNGAKVGDNQNSQTAGATGPTLLQDVQLIQKLQRFDRERIPERVVHARGTGVKGEFTATADLSNLTKAKVFSSGEKIPVFVRFSSVVHGNHSPETLRDPHGFATKFYTSEGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRTNLDDDARRFDFFSHVPESTRTLTLLYSNEGTPAGYRFMDGNGVHAYKLVNAQGEVHYVKFHWKTLQGSKNLDPKQVAAVQAKDYSHLTNDLVGAIKKGDYPKWDLYLQVLKPEDLAKFDFDPLDATKIWPDVPEQKVGQMVLNKNVDNFFQETEQVAMAPANLVPGIEPSEDRLLQGRIFSYADAQLYRIGTNGLSLPVNRPRVAVNNGNQDGQANTGHTTSGVNYEPSRLEPRPQDTAARYRALPLSGTTQQAKITREQNFKQAGELYRSYNKKDRADLVQSFGESLATTDTESKHLVLSFLYKADPEYGTGVTRVAKGDLARVKQLASTLQD
SIO_010081: PD885_RS00995
subclass of: SO_0000673
so part of: PD885_RS00995
location: 231769..233292
location: region:231769-233292:1
so has part: feature:231769-233292:1:exon

WP_002808463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231769-233292:1:exon

PD885_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01000
old locus tag: PD885_00190
so part of: sequence
location: 233352..233927
location: region:233352-233927:1
so has part: feature:233352-233927:1:exon
subclass of: SO_0000010

61892667
type: Gene
SIO_000068: ncbigene

position:233352:1
position: 233352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233927:1
position: 233927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233352-233927:1:exon

PD885_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01000
old locus tag: PD885_00190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010374921.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MRTLLFLMLGTLSAVADAASPAPVPTSAASVAATPEQIKLQLREYFFDAAREGRQDMLAEFIRSHYDLNTRDEKGYTALILAAYHGQRPAVEQLLSAGADPCAQDKRGNTALMGAIFKGEPGIARRLMQAHCAPDQRNNAGQTAAMYAALFQRTDVLKDLAAKGADLSLKDGQGNDVTKLQRGDFATTPAR
SIO_010081: PD885_RS01000
subclass of: SO_0000673
so part of: PD885_RS01000
location: 233352..233927
location: region:233352-233927:1
so has part: feature:233352-233927:1:exon

WP_002808462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233352-233927:1:exon

PD885_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01005
old locus tag: PD885_00191
so part of: sequence
location: 234580..234804
location: region:234580-234804:1
so has part: feature:234580-234804:1:exon
subclass of: SO_0000010

61892668
type: Gene
SIO_000068: ncbigene

position:234580:1
position: 234580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234804:1
position: 234804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234580-234804:1:exon

PD885_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01005
old locus tag: PD885_00191
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154914.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLDPSILFLMSLLAMVLCTATAVAALMFGQMHVLATSWSFYTVMGTALITLAASFHALGKPPSVEERVGLRNA
SIO_010081: PD885_RS01005
subclass of: SO_0000673
so part of: PD885_RS01005
location: 234580..234804
location: region:234580-234804:1
so has part: feature:234580-234804:1:exon

WP_040762634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234580-234804:1:exon

PD885_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01010
so part of: sequence
location: 234943..235741
location: region:234943-235741:1
so has part: feature:234943-235741:1:exon
subclass of: SO_0000010

61892669
type: Gene
SIO_000068: ncbigene

position:234943:1
position: 234943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235741:1
position: 235741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234943-235741:1:exon

PD885_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MRQKTYPSDMSRERFEHILPILEQARKRTKPRRVDMYEVWCAVLYVLRTGCQWRALPSDFPKWRTVHAYFAKWSECDDEGVSLLERALKKSQVGVARQKQERNIFSRFLIVDAQSVKNTDTAGQKGYDAGKKVSGIKRHIAVDTQGLPHAIAVTTAEVTDRKGALQALERCQSNLTHVQSLLCDSGYTGVPFAEGVREILGEQLTVQIAKRSELHTFKVMPKRWIVERSFAWLEKNRRLWKNCERKLNTSLQFIHLAFLALLLKRS
SIO_010081: PD885_RS01010
subclass of: SO_0000673
so part of: PD885_RS01010
location: join(234943..235214,235213..235741)
location: region:234943-235741:1
so has part: feature:234943-235214:1:exon
so has part: feature:235213-235741:1:exon

WP_088056611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234943-235214:1:exon

position:235214:1
position: 235214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:235213-235741:1:exon

position:235213:1
position: 235213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PD885_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: dusA
locus tag: PD885_RS01015
old locus tag: PD885_00193
so part of: sequence
location: 235968..236972
location: region:235968-236972:1
so has part: feature:235968-236972:1:exon
subclass of: SO_0000010

61892670
type: Gene
SIO_000068: ncbigene

position:235968:1
position: 235968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236972:1
position: 236972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235968-236972:1:exon

PD885_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: dusA
locus tag: PD885_RS01015
old locus tag: PD885_00193
EC number: 1.3.1.-
EC number: 1.3.1.91
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005916500.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO process: GO:0002943 - tRNA dihydrouridine synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA dihydrouridine(20/20a) synthase DusA
translation: MTASADRYATSLRLSVAPMMDWTDRHCRVFHRLLAPSARLYTEMVHANAVIHGDRTRLIGFDPVEHPLALQLGGSEPALLAQAAAIAQEWGYDEINLNCGCPSDRVQAGRFGACLMREPALVADCVAAMCAATTLPITVKCRLGVDGDDDYAAFANFADQVVAAGAALVVVHARNAWLKGLSPKENREVPPLRYDWAYRLKLELPSLPVVLNGGIAAVATALAHLRHTDGVMLGRAAYHDPYVLHCLDAALNQRPEQSRASLLRALQPYVQSQLEQGLALKHITRHVLGLFHGQPGGRAFRQILSEGAHRPDAGWELVEQALQRTDSHAWRVVA
SIO_010081: PD885_RS01015
subclass of: SO_0000673
so part of: PD885_RS01015
location: 235968..236972
location: region:235968-236972:1
so has part: feature:235968-236972:1:exon

WP_002808460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235968-236972:1:exon

PD885_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01020
old locus tag: PD885_00194
so part of: sequence
location: 237312..237614
location: region:237312-237614:1
so has part: feature:237312-237614:1:exon
subclass of: SO_0000010

61892671
type: Gene
SIO_000068: ncbigene

position:237312:1
position: 237312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237614:1
position: 237614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237312-237614:1:exon

PD885_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01020
old locus tag: PD885_00194
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012446315.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAAPLAWSQGYPMPQGGRESLPPSARGNSRTLSDTIRHVQRSTGGQILGAERVPFDGGNLNRVKYMKDGRVHTVYESEQMQAPPPRSSAPPDAPPRDDNQ
SIO_010081: PD885_RS01020
subclass of: SO_0000673
so part of: PD885_RS01020
location: 237312..237614
location: region:237312-237614:1
so has part: feature:237312-237614:1:exon

WP_040762633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237312-237614:1:exon

PD885_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01025
old locus tag: PD885_00195
so part of: sequence
location: 237686..238369
location: region:237686-238369:1
so has part: feature:237686-238369:1:exon
subclass of: SO_0000010

61892672
type: Gene
SIO_000068: ncbigene

position:237686:1
position: 237686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238369:1
position: 238369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237686-238369:1:exon

PD885_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01025
old locus tag: PD885_00195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017917079.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MRILLVEDEAPLRETLAARLKREGFAVDAAQDGEEGLYMGREVPFDVGIIDLGLPKMSGMELIKALRDEGKKFPVLILTARSSWQDKVEGLKQGADDYLVKPFHVEELLARVNALLRRAAGWSKPTLECGPVALDLAAQTVSVNGANVDLTSYEYKVLEYLMMHAGELVSKADLTEHIYQQDFDRDSNVLEVFIGRLRKKLDPDGELKPIETVRGRGYRFAIPRTEG
SIO_010081: PD885_RS01025
subclass of: SO_0000673
so part of: PD885_RS01025
location: 237686..238369
location: region:237686-238369:1
so has part: feature:237686-238369:1:exon

WP_002808458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237686-238369:1:exon

PD885_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01030
old locus tag: PD885_00196
so part of: sequence
location: 238444..239814
location: region:238444-239814:1
so has part: feature:238444-239814:1:exon
subclass of: SO_0000010

61892673
type: Gene
SIO_000068: ncbigene

position:238444:1
position: 238444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239814:1
position: 239814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238444-239814:1:exon

PD885_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01030
old locus tag: PD885_00196
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017171995.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MQARQLLAASLSLVAFLALAGYALDVAFADTAEKNLRERLKNYASAYAANIDFVRDGSLYIGGQPPDPRFDVPGGGLYVEVVRPDESWTSMSAEGPNIPHGRMLEPRQEEFIGPLEMTQIDGSLGQLYRYGLGVSYVEREHGGEIPYTIYVMEDARSMGAQLRVFRGAVWFYLGSAGVVLLVLQAFILQWSLRPLRRVINELTKVQRGEIQRMSEQHPRELEPLTESINAFIESERDNLDRQRNTLADLAHSLKTPIAVLRTQLDSGSSERDLHDEMDVQLRRMNDLVSYQLARAASSGHKLFAAPLPIEPTAEEIVRGLEKVYSVKGVLCEFDISPDARFHGEPGDLQELLGNLLENGFKWARSRVLLTAQPGPTTGNRRAGLILSVEDDGPGIAPEDVAKILQRGVRGDERVQGHGIGMSIVQDLIKAYRGELQVVRSQELGGARFNVTLPPGL
SIO_010081: PD885_RS01030
subclass of: SO_0000673
so part of: PD885_RS01030
location: 238444..239814
location: region:238444-239814:1
so has part: feature:238444-239814:1:exon

WP_108780134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238444-239814:1:exon

PD885_RS20285
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS20285
pseudo: true
so part of: sequence
location: <239902..240066
location: region:239902-240066:1
so has part: feature:239902-240066:1:exon
subclass of: SO_0000010

61896312
type: Gene
SIO_000068: ncbigene

position:239902:1
position: 239902
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:240066:1
position: 240066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239902-240066:1:exon

PD885_RS20285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS20285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019304202.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF1501 domain-containing protein
SIO_010081: PD885_RS20285
subclass of: SO_0000673
so part of: PD885_RS20285
location: <239902..240066
location: region:239902-240066:1
so has part: feature:239902-240066:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:239902-240066:1:exon

PD885_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01035
old locus tag: PD885_00197
pseudo: true
so part of: sequence
location: 240217..241585
location: region:240217-241585:1
so has part: feature:240217-241585:1:exon
subclass of: SO_0000010

61892674
type: Gene
SIO_000068: ncbigene

position:240217:1
position: 240217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241585:1
position: 241585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240217-241585:1:exon

PD885_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01035
old locus tag: PD885_00197
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035783.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: PD885_RS01035
subclass of: SO_0000673
so part of: PD885_RS01035
location: 240217..241585
location: region:240217-241585:1
so has part: feature:240217-241585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240217-241585:1:exon

PD885_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01040
old locus tag: PD885_00198
so part of: sequence
location: 242237..246223
location: region:242237-246223:1
so has part: feature:242237-246223:1:exon
subclass of: SO_0000010

61892675
type: Gene
SIO_000068: ncbigene

position:242237:1
position: 242237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246223:1
position: 246223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242237-246223:1:exon

PD885_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01040
old locus tag: PD885_00198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019238053.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: non-ribosomal peptide synthetase
translation: MHTDASPVFPLTKAQRGLWVGSKLYTDNTLMLSEALELFGPLDPHVLLRSSLRVTRELDTLRLCIAEQGGMPVQVVLPEYPGTMPYFNVADDPTPLNAAEHWIDEQIRKPEDLLNGPLWHCALFRLGEDHHLWVQYMSHLVMDGYTTAMVAQRLAVLYSADLAGTEPDAADYASATELVALEQQYRDSDRYQRDGAYWMQQLADLPPPATLARLSNYEMAGSLRGTGEFSARQMLELRGLGKRYAVSLPQMLIALVAAYYYRNTGAEDLVFAMPVSARINARYRKTPGMVANVVYIRLKMQPEQPIYALFTQVSSVVKHALRHQQYRFEDVRRDMGIFGGEQKIARLAVNIEAFDYTLRFGDAYAVPHNLSNGPADDLTIFCYERGDGAALRFDLDANPALYDSDELAEHCRRLTHLADAVLADPECALGEVDVLGDAERQRLLYTWNNTAGPLPEPATLLHGMLERAELMPAAVVVQYDNRTLDYDTLCELASRIAAQWVADGVRPGDVVAIALPRSEQLLVALLAVMWSGAAYLPLDPESPAARNRHMLSDSGAIALVCEPALCERYLLGGMVWLDPRPAVLPAAIAPLATPDGTAYVLYTSGSTGAPKGVEISHRNLFNFLHAMAQELALRPRDRVLAVTTITFDIAGLELYLPLLVGARVVIAPAGITHDPPSLSRLIAHEKISVVQATPSLWRILLANQNLALDSIHALVGGEVLVPKLAAQLLSRAGRLTQLYGPTETTIWSTIMPLQLTDAAAPPIGRPLLNTRVYVLDAQLQPLPTGAVGELYIGGAGVAKGYRGKRQLTSERFLRDPFAGDGSSMYRTGDRVRQRSDGLLEFIGRADAQLKIRGHRVEPAEIENALLQHSQVAQAVVVGHSDGDNNALQLVAYVVGKHGNTPSTELLRAHLQQHLPASTIPTLWVPLPALPLTSNGKLDRRALPAPGALPRRARVAPRDALEHQLAALLQEMLGIEVVGVDDNFFDLGGDSLHAAQMIARFPQIFGVELPLGTLFNAPTIAGLAEAIKHRTQVTNDPLSVLLQLRAGTAGTTPLFCIHPVFGLGWSYLTLLGQLDPQWPVYALQSPALSDSQHRPESIEAIARDYLARLRTVQPHGPYRLIGWSLGGLIAHAITAELHALGEEVELLAMLDSYPYLEQAASLPEAESVRASVHALGLTLAHDQPMPTTVAELASLLCDHYGLTDVPAVRQLLEQRPTLLEDMGEATQHHLQLARGHRPKPLDQDVLFVEAGVRMTSGGDEAVWVDYRPQAWSPYVRNLHLHALDCDHHSMLSPAHSATLSTLLHAATAQARQQRNGSIATASDGVAEYA
SIO_010081: PD885_RS01040
subclass of: SO_0000673
so part of: PD885_RS01040
location: 242237..246223
location: region:242237-246223:1
so has part: feature:242237-246223:1:exon

WP_002808448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242237-246223:1:exon

PD885_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01045
old locus tag: PD885_00199
so part of: sequence
location: 246216..247562
location: region:246216-247562:1
so has part: feature:246216-247562:1:exon
subclass of: SO_0000010

61892676
type: Gene
SIO_000068: ncbigene

position:246216:1
position: 246216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247562:1
position: 247562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246216-247562:1:exon

PD885_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01045
old locus tag: PD885_00199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017156748.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MPESISSPSPNRPVVIAVLGTQGDVRPIVALGRGLQERGYPVRVLTSSNFEALIRANGLEFFPLSGDHWKLLQGNPEVANMHGSRRAVWNIWRTHLLMWARDWAAQGRAACADAGLIVGVGSVSFLAHSLGQAYGVPMVFAHLQPLTVSRHLPSMVAPNLRLPGLVSAALQHMARFACWYLIRPVLNELVRPALGLTAYPWNGPDRSAMRVLYGYSAHLCPRPPDWPKSVQICGFWQLPQPQWQPPAALQAFLKAGPPPLYIGFGSMTSSDSAQLTATVKAAVRLTGQRALLASGWGGLAAGEAAADDDAERFFHLEQAPHDWLFPRVAAAVHHGGAGTTGAALVAGVPSVVLPFGYDQPFWAHCLAQRGVAPPALERAGLQPETLADAMRQASAPAMRAAARALGQRIAEEDGVSRAVDQLEAWRLLEPAVAVTPVARIEQHAIAMG
SIO_010081: PD885_RS01045
subclass of: SO_0000673
so part of: PD885_RS01045
location: 246216..247562
location: region:246216-247562:1
so has part: feature:246216-247562:1:exon

WP_040762630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246216-247562:1:exon

PD885_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01050
old locus tag: PD885_00200
pseudo: true
so part of: sequence
location: complement(247771..248680)
location: region:247771-248680:-1
so has part: feature:247771-248680:-1:exon
subclass of: SO_0000010

61892677
type: Gene
SIO_000068: ncbigene

position:247771:-1
position: 247771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248680:-1
position: 248680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247771-248680:-1:exon

PD885_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01050
old locus tag: PD885_00200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003470353.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: LysR substrate-binding domain-containing protein
SIO_010081: PD885_RS01050
subclass of: SO_0000673
so part of: PD885_RS01050
location: complement(247771..248680)
location: region:247771-248680:-1
so has part: feature:247771-248680:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247771-248680:-1:exon

PD885_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01055
pseudo: true
so part of: sequence
location: 248786..249106
location: region:248786-249106:1
so has part: feature:248786-249106:1:exon
subclass of: SO_0000010

61892678
type: Gene
SIO_000068: ncbigene

position:248786:1
position: 248786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249106:1
position: 249106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248786-249106:1:exon

PD885_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003470355.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: carboxymuconolactone decarboxylase family protein
SIO_010081: PD885_RS01055
subclass of: SO_0000673
so part of: PD885_RS01055
location: 248786..249106
location: region:248786-249106:1
so has part: feature:248786-249106:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:248786-249106:1:exon

PD885_RS21840
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21840
old locus tag: PD885_00202
so part of: sequence
location: 249369..249563
location: region:249369-249563:1
so has part: feature:249369-249563:1:exon
subclass of: SO_0000010

69055296
type: Gene
SIO_000068: ncbigene

position:249369:1
position: 249369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249563:1
position: 249563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249369-249563:1:exon

PD885_RS21840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21840
old locus tag: PD885_00202
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO function: GO:0016853 - isomerase activity [Evidence IEA]
GO process: GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: tautomerase family protein
translation: MPYARISLHLGRPPAYLHALSDSLYQAMHAVFEVPAGDCFQVIHQLDPGELIFDRHYLGRATLR
SIO_010081: PD885_RS21840
subclass of: SO_0000673
so part of: PD885_RS21840
location: 249369..249563
location: region:249369-249563:1
so has part: feature:249369-249563:1:exon

WP_002808445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249369-249563:1:exon

PD885_RS21845
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21845
so part of: sequence
location: 249580..249768
location: region:249580-249768:1
so has part: feature:249580-249768:1:exon
subclass of: SO_0000010

69055297
type: Gene
SIO_000068: ncbigene

position:249580:1
position: 249580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249768:1
position: 249768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249580-249768:1:exon

PD885_RS21845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21845
inference: COORDINATES: protein motif:HMM:NF025903.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tautomerase family protein
translation: MTAGRPRDAATKRAFYADLVARLANAPGIAPEDVMVVITTTDAQDWSFGGGRAGITAAAADA
SIO_010081: PD885_RS21845
subclass of: SO_0000673
so part of: PD885_RS21845
location: 249580..249768
location: region:249580-249768:1
so has part: feature:249580-249768:1:exon

WP_231892764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249580-249768:1:exon

PD885_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01065
old locus tag: PD885_00203
pseudo: true
so part of: sequence
location: 249918..251045
location: region:249918-251045:1
so has part: feature:249918-251045:1:exon
subclass of: SO_0000010

61892680
type: Gene
SIO_000068: ncbigene

position:249918:1
position: 249918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251045:1
position: 251045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249918-251045:1:exon

PD885_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01065
old locus tag: PD885_00203
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019238051.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: acyltransferase
SIO_010081: PD885_RS01065
subclass of: SO_0000673
so part of: PD885_RS01065
location: 249918..251045
location: region:249918-251045:1
so has part: feature:249918-251045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:249918-251045:1:exon

PD885_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01070
so part of: sequence
location: 251103..251177
location: region:251103-251177:1
so has part: feature:251103-251177:1:exon
subclass of: SO_0000011

61892681
type: Gene
SIO_000068: ncbigene

position:251103:1
position: 251103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251177:1
position: 251177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251103-251177:1:exon

PD885_RS01070
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 48664
nc RNA class: other
locus tag: PD885_RS01070
product: sX9 sRNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02228
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: PD885_RS01070
subclass of: SO_0000673
so part of: PD885_RS01070
location: 251103..251177
location: region:251103-251177:1
so has part: feature:251103-251177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:251103-251177:1:exon

PD885_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01075
old locus tag: PD885_00204
so part of: sequence
location: complement(251445..252200)
location: region:251445-252200:-1
so has part: feature:251445-252200:-1:exon
subclass of: SO_0000010

61892682
type: Gene
SIO_000068: ncbigene

position:251445:-1
position: 251445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252200:-1
position: 252200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251445-252200:-1:exon

PD885_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01075
old locus tag: PD885_00204
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005995556.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MSKTVLITGATSGFGSAAVRRFAAAGWKVTATGRRAERLDALAAELPAGQVHTSAFDMRDAQALSAAIDALPADFADIDVLVNNAGLALGTTPAQQADLAQWQQMIDTNVTALVTLTHRLLPALIERRGAIINIASVAATYPYPGGNVYGGTKAFVQQFSLGLRADLHGTGVRVTSIEPGMAETEFTLVRTGGNQAASDTLYRGATPMTAEDIAEQILYVASLPAHLNINRLEIMPVTQSFAGFQVARDAQ
SIO_010081: PD885_RS01075
subclass of: SO_0000673
so part of: PD885_RS01075
location: complement(251445..252200)
location: region:251445-252200:-1
so has part: feature:251445-252200:-1:exon

WP_002808443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:251445-252200:-1:exon

PD885_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01080
old locus tag: PD885_00205
so part of: sequence
location: complement(252361..252501)
location: region:252361-252501:-1
so has part: feature:252361-252501:-1:exon
subclass of: SO_0000010

61892683
type: Gene
SIO_000068: ncbigene

position:252361:-1
position: 252361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252501:-1
position: 252501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252361-252501:-1:exon

PD885_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01080
old locus tag: PD885_00205
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMHRGAGLLLWWGLTGAANATEQIPDRIQIDGQDTVLSAEPLSSVR
SIO_010081: PD885_RS01080
subclass of: SO_0000673
so part of: PD885_RS01080
location: complement(252361..252501)
location: region:252361-252501:-1
so has part: feature:252361-252501:-1:exon

WP_002808442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252361-252501:-1:exon

PD885_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01085
old locus tag: PD885_00206
so part of: sequence
location: complement(252508..253383)
location: region:252508-253383:-1
so has part: feature:252508-253383:-1:exon
subclass of: SO_0000010

61892684
type: Gene
SIO_000068: ncbigene

position:252508:-1
position: 252508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253383:-1
position: 253383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252508-253383:-1:exon

PD885_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01085
old locus tag: PD885_00206
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014091287.1
GO function: GO:0042834 - peptidoglycan binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SPOR domain-containing protein
translation: MAARRGKSQARRNTSSGTPGWVWLVAGAAIAAVIFLAAPNLFKKDGDGFLRMGPRANPDAQPEPVADADVDTPAELPKPTAQPSKPQAKPGNAQTQYDFYTLLPGKEVQMSDAELAASARAEEAARARAALEGKPVAPAHGASGAAATPAAGVPVPLNETVASASKPLTETAPARPTATPAPSSTAALTMPAAATPRPAVAATTAATAAPAVADNTRYILQAGAFGASGDAESTKAKLAMMGLAARVESAEISGRTVYRVRMGPYGSAGELAAAKQKLTGSGLPAIAIKAQ
SIO_010081: PD885_RS01085
subclass of: SO_0000673
so part of: PD885_RS01085
location: complement(252508..253383)
location: region:252508-253383:-1
so has part: feature:252508-253383:-1:exon

WP_002808441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252508-253383:-1:exon

PD885_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: argS
locus tag: PD885_RS01090
old locus tag: PD885_00208
so part of: sequence
location: complement(253579..255267)
location: region:253579-255267:-1
so has part: feature:253579-255267:-1:exon
subclass of: SO_0000010

61892685
type: Gene
SIO_000068: ncbigene

position:253579:-1
position: 253579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255267:-1
position: 255267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253579-255267:-1:exon

PD885_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: argS
locus tag: PD885_RS01090
old locus tag: PD885_00208
EC number: 6.1.1.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019300787.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arginine--tRNA ligase
translation: MKAQLRALIGQGIEALRANGTLPAGTLPPDFVVERPKTREHGDFATNAAMLLAKPARSNPRALAQALVAALPASDDVAKVEIAGPGFINFHLAPTAYQREVAHVIKQGRNYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSVQARAQGLTPDSAGWPENGYRGDYIADVANAYLDGATVDLEGHLVAGTRDPADLESIRRFAVAYLRNEQNQDLAAFRVDFDIYFLESSLYKDGKVEEAVQKLIASGHTYEEGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLARVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGYKYEQANGLAELAHLDEEHSLNVMLELSRYQEVVEIAGQALEPYQIAQYLRELAHAFHTWYHNTKLLVDDAAERDAKLTLAVATQQVLANGLKLLGVSAPEKM
SIO_010081: PD885_RS01090
subclass of: SO_0000673
so part of: PD885_RS01090
location: complement(253579..255267)
location: region:253579-255267:-1
so has part: feature:253579-255267:-1:exon

WP_002808440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253579-255267:-1:exon

PD885_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: radC
locus tag: PD885_RS01095
old locus tag: PD885_00209
so part of: sequence
location: complement(255354..256031)
location: region:255354-256031:-1
so has part: feature:255354-256031:-1:exon
subclass of: SO_0000010

61892686
type: Gene
SIO_000068: ncbigene

position:255354:-1
position: 255354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256031:-1
position: 256031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255354-256031:-1:exon

PD885_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: radC
locus tag: PD885_RS01095
old locus tag: PD885_00209
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010381948.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RadC
translation: MHIHDWPTHERPREKLLARGAAALSDAELLAIFVGSGLRGQDAVQTARDLLHRHGPLRLLLDRPASALVRLPGLGPASACKLNAAMELANRHLMSDLERGEVLSDPSSVGRYFSQQLRARAYEVFAVLFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADRAVTHRLLQGLDLVDIRLLDHFVIGDGRPVSLAERGWLE
SIO_010081: PD885_RS01095
subclass of: SO_0000673
so part of: PD885_RS01095
location: complement(255354..256031)
location: region:255354-256031:-1
so has part: feature:255354-256031:-1:exon

WP_002808439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255354-256031:-1:exon

PD885_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: coaBC
locus tag: PD885_RS01100
old locus tag: PD885_00210
so part of: sequence
location: 256128..257402
location: region:256128-257402:1
so has part: feature:256128-257402:1:exon
subclass of: SO_0000010

61892687
type: Gene
SIO_000068: ncbigene

position:256128:1
position: 256128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257402:1
position: 257402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256128-257402:1:exon

PD885_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: coaBC
locus tag: PD885_RS01100
old locus tag: PD885_00210
EC number: 4.1.1.36
EC number: 6.3.2.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007964144.1
GO function: GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO process: GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
translation: MIGSTQARPLDGQRLLLCVGGGIAAYKSLELVRRLRDAGAQVQVAMTSGAQQFVTPLSFQALSGQPTRTTLWDSAAEQAMGHIELARWADQVIVAPATADLLARLAHGLADDLVTTLCLATTAPLTVAPAMNHRMWLHPATQANVATLRARSVSVVGPDDGPLAEGESGPGRLAEPAAIIAALAGSAASGSVAQVGSKSVAARAFVPSSAQLDGLRIVISAGPTFEDLDPVRYMGNRSSGKMGYALAAAAARQGADVVLVSGPVHQITPAGVQRIDVRSAAQMHDAVLGAFPADIYIGAAAVADYTPKRVVAQKIKKTGETLTLELVRTPDILSEVASQTGALKLVVGFAAETHDVEHYARGKLVAKRLDLIIANQVGIEGGGFESDNNAATAYWQGGQCAFPSSSKTALADQLLALIAERLQA
SIO_010081: PD885_RS01100
subclass of: SO_0000673
so part of: PD885_RS01100
location: 256128..257402
location: region:256128-257402:1
so has part: feature:256128-257402:1:exon

WP_002808438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256128-257402:1:exon

PD885_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: dut
locus tag: PD885_RS01105
old locus tag: PD885_00211
so part of: sequence
location: 257399..257866
location: region:257399-257866:1
so has part: feature:257399-257866:1:exon
subclass of: SO_0000010

61892688
type: Gene
SIO_000068: ncbigene

position:257399:1
position: 257399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257866:1
position: 257866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257399-257866:1:exon

PD885_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: dut
locus tag: PD885_RS01105
old locus tag: PD885_00211
EC number: 3.6.1.23
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014091285.1
GO function: GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO process: GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dUTP diphosphatase
translation: MSTSTQSLQVKLLDPRFGDLWPLPAYATECSAGMDLRAALEAPMTLEPGDAALIPSGIAIHLSDPQVCAVILPRSGLGHRHGIVLGNGTGLIDADYQGPLLISTWNRGREAFTIEPGDRIAQLVILPIVRVGLQVVDTFVDSARGAGGFGHTGVR
SIO_010081: PD885_RS01105
subclass of: SO_0000673
so part of: PD885_RS01105
location: 257399..257866
location: region:257399-257866:1
so has part: feature:257399-257866:1:exon

WP_002808437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257399-257866:1:exon

PD885_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01110
old locus tag: PD885_00212
so part of: sequence
location: 257879..260224
location: region:257879-260224:1
so has part: feature:257879-260224:1:exon
subclass of: SO_0000010

61892689
type: Gene
SIO_000068: ncbigene

position:257879:1
position: 257879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260224:1
position: 260224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257879-260224:1:exon

PD885_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01110
old locus tag: PD885_00212
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017161151.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphomannomutase/phosphoglucomutase
translation: MSKANGRRQSMSSVHTSGPVLGGLLLFAAWFGWNSFAQWREEAVAQNLEQARDRAVQYISQAMAKQARQLDAVLKQPPVIAALANGDALAAASAIRERFKGAEDVQVLPGHLTAAYDNPKDFGYARLSLLESAMVAERAQVHVVRDAKQVRLGVAAAVRLGAQPAVAYARLPLLRLTGPLDAIAVPGSAYLALRQGSYNVAQQGNTALADAAETLAKPLGTSGLRVAAAVPPSHNGPLELGALGCAIVAALLLSIAVLLVLVSRGRVALPRRRVAGDSTADEPTFSQSLQYDASIASEARALDEERALPAAPGPVPAVQIAIEMFRAYDIRGVVGRDLNAGIAALIGQSIGSVMQAQGLRDVVVGRDGRLSGAELANGLIEGLRRAGCKVIDIGLAPTPVVYFGAYELRAGSCVAVTGSHNPPDYNGFKIVIGGETLSGTAIAELHQRINQGRLHTAATLGELEQRDISDAYIQRIVSDVSLDRPIKVVVDAGNGAGGDIAPRLLEAIGAEVVPLYCEIDGTFPNHHPDPSEPHNLDDLVKMVKRFDADIGVAFDGDADRLGVVTKEGSIVFPDRLLMLFAADVLQRNPGALVIYDVKCTGKLYDYVLRNGGSPLMWKTGHSLIKSKMRETDAELAGEMSGHFFFKERWYGFDDGIYAAARLLEILAQCEQTPSEVLDALPESVYTPEIKVPVDGDAHALVARFVERTQAGEGSSFESARLSMIDGLRADFADGWGLVRASNTTPILVLRFEADTEAALQRIRALFRSQLQALLPKHPLTF
SIO_010081: PD885_RS01110
subclass of: SO_0000673
so part of: PD885_RS01110
location: 257879..260224
location: region:257879-260224:1
so has part: feature:257879-260224:1:exon

WP_040762627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257879-260224:1:exon

PD885_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01115
old locus tag: PD885_00213
so part of: sequence
location: complement(260327..260860)
location: region:260327-260860:-1
so has part: feature:260327-260860:-1:exon
subclass of: SO_0000010

61892690
type: Gene
SIO_000068: ncbigene

position:260327:-1
position: 260327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260860:-1
position: 260860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260327-260860:-1:exon

PD885_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01115
old locus tag: PD885_00213
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006448979.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSALPHRPLSMPAPIAAHWYLRLHTHQQVPLFADWRCARAAASSLAAASHWRGAQLLCWVLLPDSWCALLQAPGRAALLQMAMAARQTASDAVNRARGRGGTVWQPAMEATALALHADHRQFARSLVALPLRAGLADQIGAYPYWDAVWLLHDDGGAAAAIPAPGDRSCMAGLGGS
SIO_010081: PD885_RS01115
subclass of: SO_0000673
so part of: PD885_RS01115
location: complement(260327..260860)
location: region:260327-260860:-1
so has part: feature:260327-260860:-1:exon

WP_052032138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260327-260860:-1:exon

PD885_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01120
old locus tag: PD885_00214
so part of: sequence
location: complement(261101..261442)
location: region:261101-261442:-1
so has part: feature:261101-261442:-1:exon
subclass of: SO_0000010

61892691
type: Gene
SIO_000068: ncbigene

position:261101:-1
position: 261101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261442:-1
position: 261442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261101-261442:-1:exon

PD885_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01120
old locus tag: PD885_00214
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017156759.1
GO function: GO:0008915 - lipid-A-disaccharide synthase activity [Evidence IEA]
GO process: GO:0009245 - lipid A biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid-A-disaccharide synthase N-terminal domain-containing protein
translation: MELHWLDQPLTWLFWTGLHVTGWKLIGYAGALMFGGRWLVQFVASKRAGKPVIPRMFWYMSVVGSLMTLSYFVFSAKQDSVGVLQNLFPAFTAFYSLYLDVKHRGWMRDRAMH
SIO_010081: PD885_RS01120
subclass of: SO_0000673
so part of: PD885_RS01120
location: complement(261101..261442)
location: region:261101-261442:-1
so has part: feature:261101-261442:-1:exon

WP_002808434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261101-261442:-1:exon

PD885_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01125
old locus tag: PD885_00215
so part of: sequence
location: complement(261442..262164)
location: region:261442-262164:-1
so has part: feature:261442-262164:-1:exon
subclass of: SO_0000010

61892692
type: Gene
SIO_000068: ncbigene

position:262164:-1
position: 262164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261442-262164:-1:exon

PD885_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01125
old locus tag: PD885_00215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011038929.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MSQPQLSVVVPVFNERDNVAALVGEIVTTLRGLMAFEIVYVDDHSRDDTLKVLQGLKTITPELRVLHHVTQSGQSTAVRSGVKAARASWITTLDGDGQNDPADIPTLLTARASADAQVKLFAGWRVNRQDSGSKRWASKWANAIRSRMLHDNTPDTGCGIKLFEREAFLDLPYFDHMHRYLPALMQRAGWRTVSVPVNHRHRTAGVSKYNNLNRALVGIRDLRGVAWLITRSKRTIVQER
SIO_010081: PD885_RS01125
subclass of: SO_0000673
so part of: PD885_RS01125
location: complement(261442..262164)
location: region:261442-262164:-1
so has part: feature:261442-262164:-1:exon

WP_002808433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261442-262164:-1:exon

PD885_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01130
old locus tag: PD885_00216
so part of: sequence
location: complement(262461..263426)
location: region:262461-263426:-1
so has part: feature:262461-263426:-1:exon
subclass of: SO_0000010

61892693
type: Gene
SIO_000068: ncbigene

position:262461:-1
position: 262461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263426:-1
position: 263426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262461-263426:-1:exon

PD885_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01130
old locus tag: PD885_00216
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017169566.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent epimerase/dehydratase family protein
translation: MTILVTGAAGFIGAYTCRALAARGESVVGLDNYNSYYDPQLKRDRVAALCPDIDIRTLDLTDRDGLAALFGEVQPTRVVHLAAQAGVRYSLENPTVYVDSNLVGFVNMLELCRHRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMGHTYAQLYGLCATGLRFFTVYGPWGRPDMAPLIFSRAVLAGRPIEVFNHGKMQRDFTFVDDIVAGVLGALDTPSSEPVPHRMFNLGNHTPVELEHFIDVIAQAAGRPAEKAYLPMQPGDMIRTMADTQRAQAAFGFDPATPVERGLPQVVAWCRNYFGNRA
SIO_010081: PD885_RS01130
subclass of: SO_0000673
so part of: PD885_RS01130
location: complement(262461..263426)
location: region:262461-263426:-1
so has part: feature:262461-263426:-1:exon

WP_002808431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262461-263426:-1:exon

PD885_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01135
so part of: sequence
location: 263419..263613
location: region:263419-263613:1
so has part: feature:263419-263613:1:exon
subclass of: SO_0000010

61892694
type: Gene
SIO_000068: ncbigene

position:263419:1
position: 263419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263613:1
position: 263613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263419-263613:1:exon

PD885_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01135
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVIAVVLDISKINGASKRRLGQPEALFFGNVEAIKRNDVSNPLGIEAIWHASLPSFSFSAVSSG
SIO_010081: PD885_RS01135
subclass of: SO_0000673
so part of: PD885_RS01135
location: 263419..263613
location: region:263419-263613:1
so has part: feature:263419-263613:1:exon

WP_002808430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263419-263613:1:exon

PD885_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01140
pseudo: true
so part of: sequence
location: complement(263872..264175)
location: region:263872-264175:-1
so has part: feature:263872-264175:-1:exon
subclass of: SO_0000010

61892695
type: Gene
SIO_000068: ncbigene

position:263872:-1
position: 263872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264175:-1
position: 264175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263872-264175:-1:exon

PD885_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016901959.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-hairpin-helix domain-containing protein
SIO_010081: PD885_RS01140
subclass of: SO_0000673
so part of: PD885_RS01140
location: complement(263872..264175)
location: region:263872-264175:-1
so has part: feature:263872-264175:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263872-264175:-1:exon

PD885_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01145
old locus tag: PD885_00219
so part of: sequence
location: complement(264210..265139)
location: region:264210-265139:-1
so has part: feature:264210-265139:-1:exon
subclass of: SO_0000010

61892696
type: Gene
SIO_000068: ncbigene

position:264210:-1
position: 264210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265139:-1
position: 265139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264210-265139:-1:exon

PD885_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01145
old locus tag: PD885_00219
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017163137.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MSKPIPAKKRGLGRGLEALLGPKGAAAAAAPSAASEDALQPGDSLRQLPVAQLQPGRYQPRREMDEVKLAELAESIKAQGVIQPIVARELAPGQFEIVAGERRWRASQLAGLTEVPVVVRELDDRTVIAMALIENIQREDLNPLEEAQALQRLIDEFSLTHAEAAGAVGRSRASVSNLLRLLELPVAIRVLLETRRLEMGHARALLTLAPELASKLAQEAADQGWSVREVEHRAQQFAAGKVPGSLRKLKPAAVAPQADIVSLETELSESLGTKVVFNHGRGSSGKLVIHYTDLDTLDGVLERLRMQRS
SIO_010081: PD885_RS01145
subclass of: SO_0000673
so part of: PD885_RS01145
location: complement(264210..265139)
location: region:264210-265139:-1
so has part: feature:264210-265139:-1:exon

WP_002808429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264210-265139:-1:exon

PD885_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01150
old locus tag: PD885_00220
so part of: sequence
location: complement(265139..265936)
location: region:265139-265936:-1
so has part: feature:265139-265936:-1:exon
subclass of: SO_0000010

61892697
type: Gene
SIO_000068: ncbigene

position:265936:-1
position: 265936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265139-265936:-1:exon

PD885_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01150
old locus tag: PD885_00220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005914407.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MARIIAIANQKGGVGKTTTAVNLAAGLARAPKRVLLVDLDSQGNATMGSGIDKRDVAASTCDLLLGENTAAQIRVTAPEGFDLLPGNIDLTAAEIQLMDQGGREQRLKRALAPIREEYDFILIDCPPALSLLTLNALTAADSIIVPMQCEYYALEGLTALLETIEALRADLNPALEIEGVLRTMFDIRNNLANAVSAELTEHFGDKVFRTIVPRNVRLAEAPSHGQSIVGYDRTSRGGVAYLGLAGEIVRRHNDCNKAVRPVETV
SIO_010081: PD885_RS01150
subclass of: SO_0000673
so part of: PD885_RS01150
location: complement(265139..265936)
location: region:265139-265936:-1
so has part: feature:265139-265936:-1:exon

WP_002808428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265139-265936:-1:exon

PD885_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01155
old locus tag: PD885_00221
so part of: sequence
location: complement(266052..266696)
location: region:266052-266696:-1
so has part: feature:266052-266696:-1:exon
subclass of: SO_0000010

61892698
type: Gene
SIO_000068: ncbigene

position:266052:-1
position: 266052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266696:-1
position: 266696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266052-266696:-1:exon

PD885_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01155
old locus tag: PD885_00221
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019300775.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLLAAVAAAVVAAPAIAQDKPAAKKLYCWNQNGARVCSDTLPSEAVNQARDEFNVNSGMRSAEVQRAMSSDERAAAAASAQQRQADLAAEQMRQRTDQAMLMSYQSEEGLRRVFTERIAIVDNNIHTARFNVTSLREGLASMLRSAGDRELAGQAVADKLAADIQQRHRELMTQLRLQTSFEQQRVALDGEIADVLQRYRAMKEPQSGASPTG
SIO_010081: PD885_RS01155
subclass of: SO_0000673
so part of: PD885_RS01155
location: complement(266052..266696)
location: region:266052-266696:-1
so has part: feature:266052-266696:-1:exon

WP_040762678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266052-266696:-1:exon

PD885_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: pyrE
locus tag: PD885_RS01160
old locus tag: PD885_00222
so part of: sequence
location: complement(266740..267399)
location: region:266740-267399:-1
so has part: feature:266740-267399:-1:exon
subclass of: SO_0000010

61892699
type: Gene
SIO_000068: ncbigene

position:266740:-1
position: 266740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267399:-1
position: 267399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266740-267399:-1:exon

PD885_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: pyrE
locus tag: PD885_RS01160
old locus tag: PD885_00222
EC number: 2.4.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010374714.1
GO function: GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: orotate phosphoribosyltransferase
translation: MTDHRTRFLQLALGADALRFGEFTLKSGRVSPYFFNAGRFDSGAKTAQLAQCYADAIDAAGVEFDLLFGPAYKGIPLATALACAYAGRARDLPLAFNRKEAKDHGEGGTLIGAPLAGRRVLIVDDVITAGTAIREALGTIRGAGGIPSGIVVALDRQEIASEQDRRSAAQAVAAEAGIPVIAVANLADLLAFAAGNADLVGFREPLLAYRGRYGTDTTD
SIO_010081: PD885_RS01160
subclass of: SO_0000673
so part of: PD885_RS01160
location: complement(266740..267399)
location: region:266740-267399:-1
so has part: feature:266740-267399:-1:exon

WP_002808426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266740-267399:-1:exon

PD885_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01165
old locus tag: PD885_00223
so part of: sequence
location: 267521..268321
location: region:267521-268321:1
so has part: feature:267521-268321:1:exon
subclass of: SO_0000010

61892700
type: Gene
SIO_000068: ncbigene

position:267521:1
position: 267521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268321:1
position: 268321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267521-268321:1:exon

PD885_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01165
old locus tag: PD885_00223
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005930855.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease III
translation: MRIISFNANGLRSAATKGFFEWFAAQDADVLCVQETKAQEHQLAGPKFLPTGYKAWFRDASTKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFGNLSVVSFYIPSGSSGQLRQDYKFQVMEWLRPILDAWLASGRQYVLCGDWNIVRSVLDIKNWKSNQKNSGCLPPERDWLNGLCADALDDANAADGRGWVDSYRVLHPQGEDYTWWSNRGAARANNVGWRIDYQLITPGLRDTLKACSIYREQRFSDHAPYIVDYAQ
SIO_010081: PD885_RS01165
subclass of: SO_0000673
so part of: PD885_RS01165
location: 267521..268321
location: region:267521-268321:1
so has part: feature:267521-268321:1:exon

WP_002808425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267521-268321:1:exon

PD885_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01170
so part of: sequence
location: 268318..268650
location: region:268318-268650:1
so has part: feature:268318-268650:1:exon
subclass of: SO_0000010

61892701
type: Gene
SIO_000068: ncbigene

position:268318:1
position: 268318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268650:1
position: 268650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268318-268650:1:exon

PD885_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQALALASEKQRQLFAATELGLADDVAATQRDLQGRAIGSQGRLPSSGLTTQMKTLVVEAVLPHFDTTHADAMDSLRSALSASESSTHATARRIQSAAPIAFRSHRPHA
SIO_010081: PD885_RS01170
subclass of: SO_0000673
so part of: PD885_RS01170
location: 268318..268650
location: region:268318-268650:1
so has part: feature:268318-268650:1:exon

WP_002808424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268318-268650:1:exon

PD885_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01175
old locus tag: PD885_00224
so part of: sequence
location: 268647..269942
location: region:268647-269942:1
so has part: feature:268647-269942:1:exon
subclass of: SO_0000010

61892702
type: Gene
SIO_000068: ncbigene

position:268647:1
position: 268647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269942:1
position: 269942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268647-269942:1:exon

PD885_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01175
old locus tag: PD885_00224
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010374708.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MTKPAPLYKSWRGIQHAFATPSAATMALLGFGSGLPFLLIASQTLSTRLRDVGLDLRSIGLISLASFFYLLKFLWAPLIDRYAFPLTALLGRRRSWLLVAQIGVTIGLFALAFSRPDLSVTGLVGWVLFASFWGATQDSVVDAYRIEIAPDAAQAALAATYTLGYRIGLILGGAGALYMAEYLGWTWAYVGIAALMLLPIATTLLCREPDRTEATVMRRVDVVGAFWQPISSFFSSNGLALGIVLLLFVGLYKFPDQVIGVMAGPFYLDSGFTKADIATVSKLFGVWMGIVGAFAGGAAVAAFGFRRMLLVAALGVALSNLAFLLMAHNPGKLWAFYAALSADNLFQGFAATVLVAFMSSLTDRNFTATQYALLVSLANLPGKFAGGVSGFVVEATSYSTFFILSALTVVPTLLLLAWLWPRLLAHDRRQD
SIO_010081: PD885_RS01175
subclass of: SO_0000673
so part of: PD885_RS01175
location: 268647..269942
location: region:268647-269942:1
so has part: feature:268647-269942:1:exon

WP_002808423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268647-269942:1:exon

PD885_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01180
old locus tag: PD885_00225
so part of: sequence
location: 270001..270228
location: region:270001-270228:1
so has part: feature:270001-270228:1:exon
subclass of: SO_0000010

61892703
type: Gene
SIO_000068: ncbigene

position:270001:1
position: 270001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270228:1
position: 270228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270001-270228:1:exon

PD885_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01180
old locus tag: PD885_00225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003489057.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDLVLRDIDPVLVDRVRRISVARGWTQHQTVMHLLKQGLFASEYEVTGGVQHPEVDALAEAIAALEALPAGNDP
SIO_010081: PD885_RS01180
subclass of: SO_0000673
so part of: PD885_RS01180
location: 270001..270228
location: region:270001-270228:1
so has part: feature:270001-270228:1:exon

WP_002808422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270001-270228:1:exon

PD885_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01185
old locus tag: PD885_00226
so part of: sequence
location: complement(270429..271571)
location: region:270429-271571:-1
so has part: feature:270429-271571:-1:exon
subclass of: SO_0000010

61892704
type: Gene
SIO_000068: ncbigene

position:270429:-1
position: 270429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271571:-1
position: 271571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270429-271571:-1:exon

PD885_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01185
old locus tag: PD885_00226
EC number: 2.7.1.170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011348848.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO process: GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009254 - peptidoglycan turnover [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anhydro-N-acetylmuramic acid kinase
translation: MSALKHVEFPLYVGLMSGTSADGIDAALVRFADGTHRRCELVAGTTVAWEPQLRETLVALGQGAEAIAIDALGQLDAQVGLAFAAAANQLIGESGVDRQRIRAIGSHGQTIRHRPKANPSFTWQIGDASRIAEHTGITTVADFRRRDVAAGGQGAPLMPAFHLAMLGAGDEDRAVLNLGGIGNLTLIPRDGPVRGLDTGPANALLDSWCQQHHGRSFDAEGAFAASGRVDAALLQALLADPWFALPPPKSTGREQFHLAWALQAMQTIGSATPHPADVQATLLELTATTVADALLRLQPDTRRVLVCGGGVRNPVLMARLVARLPGVVVESSAQHGLDPDYLEAMGFAWLAAELLAGRAANLPSVTGAAGLRRLGAIYPA
SIO_010081: PD885_RS01185
subclass of: SO_0000673
so part of: PD885_RS01185
location: complement(270429..271571)
location: region:270429-271571:-1
so has part: feature:270429-271571:-1:exon

WP_002808419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270429-271571:-1:exon

PD885_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01190
old locus tag: PD885_00227
so part of: sequence
location: complement(271798..273216)
location: region:271798-273216:-1
so has part: feature:271798-273216:-1:exon
subclass of: SO_0000010

61892705
type: Gene
SIO_000068: ncbigene

position:271798:-1
position: 271798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273216:-1
position: 273216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271798-273216:-1:exon

PD885_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01190
old locus tag: PD885_00227
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002808412.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MQNSEQGRARKRRFQERLHVLHDTALHRKLKAHLSAAFNESWTRRHWIHVSLFATIGALVATIVPGFSNAIDTPLSSHSTLALPLPPLLPSRKQRAPGTDWETVQVKPGQTLSTLFSELGIPTAVMYQVLAHPGTKDALTKLHAGAEIAFDMPAPGQLRALRFDRDDSHRVELRLLGDSVRENVIERATTMRTVVASGEISSSLYASASKSGLSPAAVEIMTDEIFKYDIDFDKDLQPGDRFSVVMDETWREGERIGTDEILAATFTTGGKTYTGFRFKREGKPAEYFDINGRPLKKSFIRMPVAYSRISSTFGARKHPVLGTMRMHKGVDYAAASGTPIMAAGDARVVFVGTQHGYGNVVILDHGRNFSTLYGHMSRFGKIKAGQRINQGTVIGYVGMTGLATGPHLHYEFRVAGQQRNPMSVTMPPPEPLQGAELAAFRAQTAPALARIESIEKLIYADAAKPGKSKPRG
SIO_010081: PD885_RS01190
subclass of: SO_0000673
so part of: PD885_RS01190
location: complement(271798..273216)
location: region:271798-273216:-1
so has part: feature:271798-273216:-1:exon

WP_002808412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271798-273216:-1:exon

PD885_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: tyrS
locus tag: PD885_RS01195
old locus tag: PD885_00228
so part of: sequence
location: 273387..274598
location: region:273387-274598:1
so has part: feature:273387-274598:1:exon
subclass of: SO_0000010

61892706
type: Gene
SIO_000068: ncbigene

position:273387:1
position: 273387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274598:1
position: 274598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273387-274598:1:exon

PD885_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: tyrS
locus tag: PD885_RS01195
old locus tag: PD885_00228
EC number: 6.1.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005930865.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine--tRNA ligase
translation: MATIEESLALIGRGVDEILKLDQLEARLKSGVPLRVKAGFDPTAPDLHLGHTVLLNKMRHFQQLGHQVIFLIGDFTGMIGDPSGKNVTRKPLTREEVLANARTYEEQVVKILDRERTEVRFNSEWFGQMSAADMIKLSAQHTVARMLERDDFAKRFSGHQPIAIHEFLYPLVQGYDSVALKADVELGGTDQKFNLLVGRGLQEHYGQAPQIVLTMPLLEGLDGIAKMSKSLGNYIGINEPAIDIVTKTMKIGDELTWRWIDLLSFDIGVAEAARLKEQVVSGELHPREVKLRLARELTARFHDAAAAEQAIAGWHAVVTGQGDTSLLPLHEVAVPAEGLRIASLLTAAGLTPSNSEATRKLKERAVKIDGEVVEDPSRQFGQGFEGVIQVGKRNFARVVLVTG
SIO_010081: PD885_RS01195
subclass of: SO_0000673
so part of: PD885_RS01195
location: 273387..274598
location: region:273387-274598:1
so has part: feature:273387-274598:1:exon

WP_002808408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273387-274598:1:exon

PD885_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: putA
locus tag: PD885_RS01200
old locus tag: PD885_00229
so part of: sequence
location: complement(274703..277903)
location: region:274703-277903:-1
so has part: feature:274703-277903:-1:exon
subclass of: SO_0000010

61892707
type: Gene
SIO_000068: ncbigene

position:274703:-1
position: 274703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277903:-1
position: 277903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274703-277903:-1:exon

PD885_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: putA
locus tag: PD885_RS01200
old locus tag: PD885_00229
EC number: 1.2.1.88
EC number: 1.5.5.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019301724.1
GO function: GO:0003842 - 1-pyrroline-5-carboxylate dehydrogenase activity [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0004657 - proline dehydrogenase activity [Evidence IEA]
GO process: GO:0010133 - proline catabolic process to glutamate [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
translation: MNAQLDPLASNPVARPLLAPELPAAPGALRAAVTAAWLKDEAEHVRELLAHARFPAAEQTKVQAVAADLVTRVRARAHDQSAIEAFMRQYDLGSEEGVLLMCVAEALLRIPDQNTADKLIRDKLGDADWNKHMGGSDSVLVNASTWGLMLTGKLVQLNELTRADVPGAFKRLIGRVGEQVIRLAVRQAMKIMGHQFVMGRTIGEALSRSRKGDNADYRYSFDMLGEGALTMEDAQRYLQAYRDAIHAIGRSGSFVGTDVFAAPSISIKLSALYPRYEHAKRARVLAELVPGVLELAQLAKAYGIGYTVDAEEADRLELSLDIIEATFSDRSLDGWEGYGLAVQAYQKRTPYTIDFLADLARRLGRRIPVRLVKGAYWDAEIKRAQIEGHPGYPVFTRKQNTDVSYLACARCMFTHSDALYPMFATHNAQTIAAVRAIAAGKTYEYQKLHGMGDDLYAEVIPLDRLGLPCRVYAPVGSHEDLLPYLVRRLLENGANSSFVNRITDETVAIEELIRDPVEAVLSFASIPHPKIPLPTELLRSQNQHRKNSMGANLANDNDLRQLAEQLNAAIKPWKAAPLVPGAVISTPSEAVLNPADRRETVGQWQPADPATVQRSLATAAAAQPAWNRTPAASRATILEHAAELLEARMPGFMAICVKEAGKTLPDAVAEVREAVDFLRYYASQARAQFSAPERLPGPTGESNELQLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNSVIAKPAEQTNLIGYAAVKLLHEAGIPEAVVQFLPGDGATVGAALTNDPRVAGVAFTGSTDTARIINRTLASRDAAIGVLIAETGGQNAFIADSSSLPEAVVKDAISSAFMSAGQRCSAARVLFVQDDIADKVMTMLAGAMGELKIGDPGQLSTDVGPVIDADALKILGDHAARMDSEARLIGCTTLDAVTANGSFFAPRAYELTSLAQLHREVFGPVLHVIRWKADQLDTVIDQINATGYGLTLGVHSRIDETIERITSRVTVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKVVTVNTTAAGGNASLLTMGD
SIO_010081: PD885_RS01200
subclass of: SO_0000673
so part of: PD885_RS01200
location: complement(274703..277903)
location: region:274703-277903:-1
so has part: feature:274703-277903:-1:exon

WP_002808406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274703-277903:-1:exon

PD885_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01205
old locus tag: PD885_00230
so part of: sequence
location: 278202..278678
location: region:278202-278678:1
so has part: feature:278202-278678:1:exon
subclass of: SO_0000010

61892708
type: Gene
SIO_000068: ncbigene

position:278202:1
position: 278202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278678:1
position: 278678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278202-278678:1:exon

PD885_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01205
old locus tag: PD885_00230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003484655.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2244 domain-containing protein
translation: MIELLPLMAERVGTQVRLRPPRALSGKQFVLLFAVLAGTMWLFAGLGWWTGNAFAPMFALLHSGVVALALRQLWRSGEREEAIRVGETVVEVFPFGHAPPAFQAHPHWVRLCMERDDRVLLVSSGKQIEIGSFLGPAERVELATTLKRLLAAANGRHR
SIO_010081: PD885_RS01205
subclass of: SO_0000673
so part of: PD885_RS01205
location: 278202..278678
location: region:278202-278678:1
so has part: feature:278202-278678:1:exon

WP_002808405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278202-278678:1:exon

PD885_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: coxB
locus tag: PD885_RS01210
old locus tag: PD885_00231
so part of: sequence
location: 278695..279603
location: region:278695-279603:1
so has part: feature:278695-279603:1:exon
subclass of: SO_0000010

61892709
type: Gene
SIO_000068: ncbigene

position:278695:1
position: 278695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279603:1
position: 279603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278695-279603:1:exon

PD885_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: coxB
locus tag: PD885_RS01210
old locus tag: PD885_00231
EC number: 7.1.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052584.1
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c oxidase subunit II
translation: MTQRSSWKSMHARLGLAMTALLSAPAAWAQSADLKQWQLNMGRGVTQTARMAYEAHMVALWVCVVIGALVFAAMGYAIFKFRKSKGAVAAQFSHNATAEILWTVIPVLVLIAMAWPATAKLIAMYDTRESEMTVKVTGYQWMWKYEYLGQGVEFTSRLARESDRIRQSGERPTAASQPHYLRDVDNRLVLPVNTKIRFVITADDVIHAWWVPALGWKQDAIPGIVNEAWTNIEQPGVYRGQCAELCGKDHGFMPIVVEALPKAEFQRWLAARRSVAGASPAAAAPVTPPDETAPAAAPTAVL
SIO_010081: PD885_RS01210
subclass of: SO_0000673
so part of: PD885_RS01210
location: 278695..279603
location: region:278695-279603:1
so has part: feature:278695-279603:1:exon

WP_002808403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278695-279603:1:exon

PD885_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: ctaD
locus tag: PD885_RS01215
old locus tag: PD885_00232
so part of: sequence
location: 279642..281246
location: region:279642-281246:1
so has part: feature:279642-281246:1:exon
subclass of: SO_0000010

61892710
type: Gene
SIO_000068: ncbigene

position:279642:1
position: 279642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281246:1
position: 281246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279642-281246:1:exon

PD885_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: ctaD
locus tag: PD885_RS01215
old locus tag: PD885_00232
EC number: 7.1.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014501708.1
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c oxidase subunit I
translation: MAHTAVDHHGHHQPGFVERWFFSTNHKDIGTLYLLFSFVMFIVGAAMSVVIRAELMQPGLQFVKPEFFNQMTTVHALVMIFGGVMPAFVGLANWMIPLQIGAPDMALPRMNNWSFWLLPVAFTLLLLTLFLPGGAPAGGWTLYPPLSLQGGYNVAFSVFAIHVAGVSSIMGAINIIATVLNMRAPGIDLLKMPIFCWAWLITAFLLIAVMPVLAGAVTMLLTDKFFGTSFFNAAGGGDPVMYQHIFWFFGHPEVYIMILPAFGVVSEIIPTFSRKPLFGYQAMVYAIAAIAFLSFIVWAHHMFTVGMPLGGEIYFMFATMLISIPTGVKVFNWVSTMWKGSLTFESPMLWAVAFVILFSIGGFSGLMLAIVPADFQYHDTYFVVAHFHYVLVTGAVFALIAAVYYWWPKWTGRMYNETWAKFHFWWTMVFVNLLFFPQHFLGLAGMPRRIPDYNVVFADWNLISSVGAFGMFATPFLMAGILLASLRSGAKADARAWEGAKGLEWTVPSPAPAHTFTVPPMIKPGDLAHEDIGY
SIO_010081: PD885_RS01215
subclass of: SO_0000673
so part of: PD885_RS01215
location: 279642..281246
location: region:279642-281246:1
so has part: feature:279642-281246:1:exon

WP_002808401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279642-281246:1:exon

PD885_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01220
old locus tag: PD885_00233
so part of: sequence
location: 281227..281400
location: region:281227-281400:1
so has part: feature:281227-281400:1:exon
subclass of: SO_0000010

61892711
type: Gene
SIO_000068: ncbigene

position:281227:1
position: 281227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281400:1
position: 281400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281227-281400:1:exon

PD885_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01220
old locus tag: PD885_00233
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003484652.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTSVTEPAPASAVIRLLSAAERQAQQRRAVRRTAVTVSIIAALIYAGFIASGVIAR
SIO_010081: PD885_RS01220
subclass of: SO_0000673
so part of: PD885_RS01220
location: 281227..281400
location: region:281227-281400:1
so has part: feature:281227-281400:1:exon

WP_002808399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281227-281400:1:exon

PD885_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01225
old locus tag: PD885_00234
so part of: sequence
location: 281397..281993
location: region:281397-281993:1
so has part: feature:281397-281993:1:exon
subclass of: SO_0000010

61892712
type: Gene
SIO_000068: ncbigene

position:281397:1
position: 281397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281993:1
position: 281993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281397-281993:1:exon

PD885_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01225
old locus tag: PD885_00234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017163727.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c oxidase assembly protein
translation: MNARVPAPAPTAGLFKLLGVVLGVFVLTFSLVPLYRIACEKVFGIRMERAPGSSRASEGAPAASGKRTVRVEFDAGVNSKLPWTFHPEQMTMDVVPGELNEALYFARNDSPRAVVGSAVPSVAPARASGYFNKTECFCFTAQTLQAGETRDMPLRFIVDPALPPEVTTITLSYTFYRNDALTSELRGAGASSAPRAAP
SIO_010081: PD885_RS01225
subclass of: SO_0000673
so part of: PD885_RS01225
location: 281397..281993
location: region:281397-281993:1
so has part: feature:281397-281993:1:exon

WP_002808397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281397-281993:1:exon

PD885_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01230
old locus tag: PD885_00235
so part of: sequence
location: 282032..282907
location: region:282032-282907:1
so has part: feature:282032-282907:1:exon
subclass of: SO_0000010

61892713
type: Gene
SIO_000068: ncbigene

position:282032:1
position: 282032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282907:1
position: 282907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282032-282907:1:exon

PD885_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01230
old locus tag: PD885_00235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014501710.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c oxidase subunit 3
translation: MADHSTNADAYFVPSQSKWPFVGSIAMFVMMIGVASWLNDAAWGRWTFFAGVAMLLATLFMWFGDVIRESNAGHYNRQVDGSFRMGMVWFIFSEVMFFGAFFGALFYTRVLTLPWLGGEGDGVMTNELLWNGYSAAWPTNGPGTIGGQFQTIPAWGLPLINTLILLSSGVTLTIAHHALKGGRRGSLSLWLGLTVLLGCVFLFLQAEEYIHAYTELNLTLGSGIYGSTFFMLTGFHGMHVLLGTIMLAVMWLRAAKGHFTRDHHFAFEAAAWYWHFVDVVWLALFLFVYVL
SIO_010081: PD885_RS01230
subclass of: SO_0000673
so part of: PD885_RS01230
location: 282032..282907
location: region:282032-282907:1
so has part: feature:282032-282907:1:exon

WP_002808395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282032-282907:1:exon

PD885_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01235
old locus tag: PD885_00236
so part of: sequence
location: complement(282990..283208)
location: region:282990-283208:-1
so has part: feature:282990-283208:-1:exon
subclass of: SO_0000010

61892714
type: Gene
SIO_000068: ncbigene

position:282990:-1
position: 282990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283208:-1
position: 283208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282990-283208:-1:exon

PD885_RS01235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01235
old locus tag: PD885_00236
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157720.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: twin transmembrane helix small protein
translation: MNDSLKTLLIVAFLIVILWNLGAGLYYLLTDRGETKRTVNALTWRIGLSVALIAVVIIGIYTGWIKPHGIGR
SIO_010081: PD885_RS01235
subclass of: SO_0000673
so part of: PD885_RS01235
location: complement(282990..283208)
location: region:282990-283208:-1
so has part: feature:282990-283208:-1:exon

WP_002808393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282990-283208:-1:exon

PD885_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01240
old locus tag: PD885_00237
so part of: sequence
location: 283269..283994
location: region:283269-283994:1
so has part: feature:283269-283994:1:exon
subclass of: SO_0000010

61892715
type: Gene
SIO_000068: ncbigene

position:283269:1
position: 283269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283994:1
position: 283994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283269-283994:1:exon

PD885_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01240
old locus tag: PD885_00237
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172044.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SURF1 family protein
translation: MMRKHTMVLGWCLALLVSAGFAALGQWQLQRMHSKQALLERAAHVRETPLTLMQAFAMPHELAWVSGRVRFLPQQVLLDNQLHEGRAGVRVYQLAAPEGMSGTLLVELGWLPLPANRQLPTITPMQGTQTIQGLLGAPTSAGLAIGPALAAVDAPQIWLATRLDTTALRSTLGRRDISSQVLRLDPALPVGYVRDLEMLPNTLPPARHLGYAVQWFGLATAVLVTATLLTWRARRRRRRGH
SIO_010081: PD885_RS01240
subclass of: SO_0000673
so part of: PD885_RS01240
location: 283269..283994
location: region:283269-283994:1
so has part: feature:283269-283994:1:exon

WP_002808391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283269-283994:1:exon

PD885_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01245
old locus tag: PD885_00238
so part of: sequence
location: 284022..284597
location: region:284022-284597:1
so has part: feature:284022-284597:1:exon
subclass of: SO_0000010

61892716
type: Gene
SIO_000068: ncbigene

position:284022:1
position: 284022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284597:1
position: 284597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284022-284597:1:exon

PD885_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01245
old locus tag: PD885_00238
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019303937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSSTSATPHSVKRGRRMLIALAVLFFGSMLLAGVLRFSGWQPASMRNHGELLKPPADLRALVPLRANGQPYAWAPIERVWRIALAPPANCTQQCVALAAELDKVWQLLGHRADKVEVLWIGSPPAGLPPMPALRVLRGDARLRQALPRATDAAGVPVYVIDPNGFVILRYAPDFDPAGLRADLVKLLKLM
SIO_010081: PD885_RS01245
subclass of: SO_0000673
so part of: PD885_RS01245
location: 284022..284597
location: region:284022-284597:1
so has part: feature:284022-284597:1:exon

WP_002808390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284022-284597:1:exon

PD885_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01250
old locus tag: PD885_00239
so part of: sequence
location: 284608..285771
location: region:284608-285771:1
so has part: feature:284608-285771:1:exon
subclass of: SO_0000010

61892717
type: Gene
SIO_000068: ncbigene

position:284608:1
position: 284608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285771:1
position: 285771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284608-285771:1:exon

PD885_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01250
old locus tag: PD885_00239
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019238044.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: COX15/CtaA family protein
translation: MNLFAPPALFRHFHRMAWLAALFTASTILFGSFVRLSDAGMSCPDWPTCYGRVTWPQTTDQANTHVASQIRPLESHKAWREQVHRFLAGALGVEVLVLSLLAARRRRMGIAQVVSAAVLVALSIPLYISGWHGVAFGMAVAGEAVLLLAALRWSNIDLARAAVLTLAVVIFQALLGMWTVTLLLKPIVVMGHLLGGMLMFSLLVWMAWRATHVPITLADASRLKWLLRLGVAVLGLQIALGGWVSANYAALACGGGSWSADNFPRCVSQWWPPHDFREGFTLWRGIGVDYEAGVLDGAARIAIQMAHRLWAIATSLYLWWLAWRLSRSPGMRGWAVALTVLVAVQVTLGMLNVKLALPLEVSVMHNGGAVALLFVLVSLLARLRAPE
SIO_010081: PD885_RS01250
subclass of: SO_0000673
so part of: PD885_RS01250
location: 284608..285771
location: region:284608-285771:1
so has part: feature:284608-285771:1:exon

WP_002808388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284608-285771:1:exon

PD885_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: cyoE
locus tag: PD885_RS01255
old locus tag: PD885_00240
so part of: sequence
location: 285774..286670
location: region:285774-286670:1
so has part: feature:285774-286670:1:exon
subclass of: SO_0000010

61892718
type: Gene
SIO_000068: ncbigene

position:285774:1
position: 285774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286670:1
position: 286670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285774-286670:1:exon

PD885_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: cyoE
locus tag: PD885_RS01255
old locus tag: PD885_00240
EC number: 2.5.1.141
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007966545.1
GO function: GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO process: GO:0006783 - heme biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heme o synthase
translation: MAVSARDYWDLTKPKVVALIVFTALVGMFLAVPDMPTWPQVRTGALGFLGIWMAASAAAAINQLLDAKIDAQMARTSWRPLVVGKVRPWHVLVFASVLIVISMTILVVWVNVITAVLTFASLIGYAVIYTVYLKRATSQNIVIGGLAGATPPMLGWAAVTGLPTSADWINASLLVLIIFIWTPPHFWALAIFRRADYAKAAIPMLPVTHGVPHTRRQILIYTVLLAIVTVLPVAVGMSGVFYLGGAVVLNVVFLWYAWRMLDPPDELFSMKMFGYSIVYLMALFAFLMVDHLLLPWVR
SIO_010081: PD885_RS01255
subclass of: SO_0000673
so part of: PD885_RS01255
location: 285774..286670
location: region:285774-286670:1
so has part: feature:285774-286670:1:exon

WP_002808386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285774-286670:1:exon

PD885_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01260
pseudo: true
so part of: sequence
location: complement(286877..>287375)
location: region:286877-287375:-1
so has part: feature:286877-287375:-1:exon
subclass of: SO_0000010

61892719
type: Gene
SIO_000068: ncbigene

position:286877:-1
position: 286877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287375:-1
position: 287375
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286877-287375:-1:exon

PD885_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017174430.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: dihydroneopterin aldolase
SIO_010081: PD885_RS01260
subclass of: SO_0000673
so part of: PD885_RS01260
location: complement(286877..>287375)
location: region:286877-287375:-1
so has part: feature:286877-287375:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:286877-287375:-1:exon

PD885_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01265
old locus tag: PD885_00242
so part of: sequence
location: complement(287708..288709)
location: region:287708-288709:-1
so has part: feature:287708-288709:-1:exon
subclass of: SO_0000010

61892720
type: Gene
SIO_000068: ncbigene

position:287708:-1
position: 287708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288709:-1
position: 288709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287708-288709:-1:exon

PD885_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01265
old locus tag: PD885_00242
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007973572.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bile acid:sodium symporter family protein
translation: MKNLLARLRIDPFTLALLCTVTFASLLPVSGVAAAIMDDVTGVAIAALFFLHGARLSREAVKAGALHWRLHLVILACTFLLFPLLGLLFTPLAHLALTPELYVGMLFLCALPSTVQSSIAFTSMARGNVPAAVCAASLSSLLGVFFTPLLMGALVGRQGAMAHPAEAIGKILLQLLVPFLAGHFLRPWIGGWVERHRPVLRYTDQGTILLVVYTAFSASVNEGLWQKTPLPALLAVLGAAALLLAAAMLLITFIARGLHFSRADEIAIVFCGSKKSLATGVPMAKVMFAGGGLGAIVLPIMLYHQLQLIVCAFVAARYARTASSDPQTDAGRH
SIO_010081: PD885_RS01265
subclass of: SO_0000673
so part of: PD885_RS01265
location: complement(287708..288709)
location: region:287708-288709:-1
so has part: feature:287708-288709:-1:exon

WP_002808383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287708-288709:-1:exon

PD885_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: dnaG
locus tag: PD885_RS01270
old locus tag: PD885_00243
so part of: sequence
location: complement(288769..290514)
location: region:288769-290514:-1
so has part: feature:288769-290514:-1:exon
subclass of: SO_0000010

61892721
type: Gene
SIO_000068: ncbigene

position:288769:-1
position: 288769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290514:-1
position: 290514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288769-290514:-1:exon

PD885_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: dnaG
locus tag: PD885_RS01270
old locus tag: PD885_00243
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014506325.1
GO function: GO:0003896 - DNA primase activity [Evidence IEA]
GO process: GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA primase
translation: MPRIPDAFIDELLARTDIVEVVGGRVPLKRQGREYSARCPFHDERSASFTVSPTKQFYHCFGCGAHGTAISFLMNYDRLEFLDAVDELAKRAGMEIPQQTQQRTPQQQDDSRELYSALEAATKFFQRQLEGSERARDYLDGRGVDADNRMRFQIGYAPDSYSALKDALGTDARRMSVLERAGLFSKNDRGHVYDKFRDRVMFPIFDRRGRVIAFGGRIMGAPADGRDPGPKYLNSPETALFHKGRELYGLWQVRQTNQKIERLIVVEGYMDVVSLFQFGVTQAVATLGTATTPEHAELLFRNAHKVYFCFDGDRAGRSAAWKALESVLPKMREEKQAFFLFLPDGEDPDSIVRSQGPDAFNARLEKATPISEFYFNQRLQGAQLASRTGQAAFFDKCKPDIVAMPDSGFRDIMVTRIKELTGQDIFGASKRQSSLPSNTNGREAVPKRSLVRAAIAILLQQPSLALSLDRHHDLAGLRLPGVELLIELLDLVQQRPEISTGALLEHFADRAEQAALQKLAAQALPGDEHSWAMELHDVVTQLDKQLLRQRVEELQAKQRSQGLDNTDKYEMRELLKALAAL
SIO_010081: PD885_RS01270
subclass of: SO_0000673
so part of: PD885_RS01270
location: complement(288769..290514)
location: region:288769-290514:-1
so has part: feature:288769-290514:-1:exon

WP_002808381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288769-290514:-1:exon

PD885_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01275
old locus tag: PD885_00244
so part of: sequence
location: complement(290608..291561)
location: region:290608-291561:-1
so has part: feature:290608-291561:-1:exon
subclass of: SO_0000010

61892722
type: Gene
SIO_000068: ncbigene

position:290608:-1
position: 290608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291561:-1
position: 291561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290608-291561:-1:exon

PD885_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01275
old locus tag: PD885_00244
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006449727.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YihY/virulence factor BrkB family protein
translation: MTKLSTEHLHKHLGRLQRSLPIALLNRFLEIDVMTQAASLSFYALLSLAPLLVLLLWLTASLYPPAQEALVQQIAQLAGGSAAEVADTVIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALNLIFRTDKQRLEGVMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLPALGYVTTLALYTLAFAFLYRYLPDRTVNWRQAFIGGLITALLFALGRYGIGLYIAEAAPGSAYGSMGTLVILLVWMYYASVVFFVGALLTAVIDERVRSHRKLREAGVDPEHVLEGSVAPVVTASATQDTPTRS
SIO_010081: PD885_RS01275
subclass of: SO_0000673
so part of: PD885_RS01275
location: complement(290608..291561)
location: region:290608-291561:-1
so has part: feature:290608-291561:-1:exon

WP_002808379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290608-291561:-1:exon

PD885_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01280
old locus tag: PD885_00245
so part of: sequence
location: complement(292142..292588)
location: region:292142-292588:-1
so has part: feature:292142-292588:-1:exon
subclass of: SO_0000010

61892723
type: Gene
SIO_000068: ncbigene

position:292142:-1
position: 292142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292588:-1
position: 292588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292142-292588:-1:exon

PD885_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01280
old locus tag: PD885_00245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011038898.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GatB/YqeY domain-containing protein
translation: MPLKQQLTDDMKAAMKSGDKHSLGVIRLINAAIKQKEVDERIEMDDAAVIAVLDKMVKQRKDSVTQFEAAARDDLAQIEREEIVVIERYLPAKMGEAEIVAAIQAAITETGASNPADIGKLMGALKPKLAGQADMGLVSTLVKQHLAG
SIO_010081: PD885_RS01280
subclass of: SO_0000673
so part of: PD885_RS01280
location: complement(292142..292588)
location: region:292142-292588:-1
so has part: feature:292142-292588:-1:exon

WP_002808377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292142-292588:-1:exon

PD885_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: rpsU
locus tag: PD885_RS01285
old locus tag: PD885_00246
so part of: sequence
location: complement(292851..293066)
location: region:292851-293066:-1
so has part: feature:292851-293066:-1:exon
subclass of: SO_0000010

61892724
type: Gene
SIO_000068: ncbigene

position:292851:-1
position: 292851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293066:-1
position: 293066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292851-293066:-1:exon

PD885_RS01285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: rpsU
locus tag: PD885_RS01285
old locus tag: PD885_00246
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011235429.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S21
translation: MPSVKVRENEPFEFALRRFKRTCEKAGVLAETRKREFYEKPTQERKRKAAAAVKRQLRRSSRDVTKRQRLY
SIO_010081: PD885_RS01285
subclass of: SO_0000673
so part of: PD885_RS01285
location: complement(292851..293066)
location: region:292851-293066:-1
so has part: feature:292851-293066:-1:exon

WP_002808376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292851-293066:-1:exon

PD885_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: tsaD
locus tag: PD885_RS01290
old locus tag: PD885_00247
so part of: sequence
location: 293346..294410
location: region:293346-294410:1
so has part: feature:293346-294410:1:exon
subclass of: SO_0000010

61892725
type: Gene
SIO_000068: ncbigene

position:293346:1
position: 293346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294410:1
position: 294410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293346-294410:1:exon

PD885_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: tsaD
locus tag: PD885_RS01290
old locus tag: PD885_00247
EC number: 2.3.1.234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011038897.1
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
translation: MKVLGIESSCDETGVAVYDTALSGVPALRAHAVYSQIALHAEYGGVVPELASRDHVRKLLPLIRQTLGEAGLRIDELDGVAYTAGPGLVGALLVGAGVARSLAWALDVPAIGVHHMEGHLLAPLMEDDPPQLPFVALLVSGGHTQLVSVKALGRYEVLGETLDDAAGEAFDKTAKMMGLPYPGGPQLAALAETGTPERYKFARPMTDRPGLDFSFSGLKTQVLLAWRASDQTDTVRADIARGFEDAVVETLAIKCLRALDAADCNTLVVAGGVGANKRLRARLQEAAQRRGGRVCFPRPALCTDNGAMIAFAGALRLEAGERADAAVHVTPRWDMASLPLLAKGRVSGAGNRQS
SIO_010081: PD885_RS01290
subclass of: SO_0000673
so part of: PD885_RS01290
location: 293346..294410
location: region:293346-294410:1
so has part: feature:293346-294410:1:exon

WP_002808340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293346-294410:1:exon

PD885_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: folB
locus tag: PD885_RS01295
old locus tag: PD885_00248
so part of: sequence
location: 294495..294854
location: region:294495-294854:1
so has part: feature:294495-294854:1:exon
subclass of: SO_0000010

61892726
type: Gene
SIO_000068: ncbigene

position:294495:1
position: 294495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294854:1
position: 294854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294495-294854:1:exon

PD885_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: folB
locus tag: PD885_RS01295
old locus tag: PD885_00248
EC number: 4.1.2.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007973559.1
GO function: GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO process: GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydroneopterin aldolase
translation: MDKVFIEGLEIDALIGIYDWERRIRQTLRFDLEMGFDNRIAAASDDIADTLNYKAVSKRLIEFVQASDFGLVETLAERCAAIVLDEFQVHWLRLKLSKPGAVRGAQAVGVIIERERGSI
SIO_010081: PD885_RS01295
subclass of: SO_0000673
so part of: PD885_RS01295
location: 294495..294854
location: region:294495-294854:1
so has part: feature:294495-294854:1:exon

WP_002808339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294495-294854:1:exon

PD885_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01300
old locus tag: PD885_00249
so part of: sequence
location: 295049..297220
location: region:295049-297220:1
so has part: feature:295049-297220:1:exon
subclass of: SO_0000010

61892727
type: Gene
SIO_000068: ncbigene

position:295049:1
position: 295049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297220:1
position: 297220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295049-297220:1:exon

PD885_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01300
old locus tag: PD885_00249
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006452388.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 3 N-terminal domain-containing protein
translation: MAADRIETLIARMTVEEKVGQLGVFADMVRPFAPDVNPEANVLNADEVLQQVRQGRVGSLFNGVGAALGMQIQKVAVEESRLGIPVILAADVIHGMRTVFPIPLGEAASFEPELAERTARATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVLLGAAFAAARVRGFQGADLKAYDSLLATPKHFAAYGAVAAGMEYNTVDIAPQTLRDVHLPPFKAAFDAGALTVMSSFNDINGVPASANHELLTEILRGEWQFPGVVISDYTADMELIAHGYAADERDATKKAFLAGLDLSMQSGFYAAHLPSLVESGEVPMATLDASVRRMLQLKEAIGLFDNPYRSLDPAREADATHLPAHDALSRDAARRSIVLLKNEGAILPLKKSGQQIALIGPFVQDRENIEGCWTLFGDKKRYVTLEQGVRAVVGTENLSVVPGCGVEEALRGGISAAVDAAQAADVVVLALGEPQRFSGEAQSRTEITLPLAQQALAEAVAATGTPIVVLLRNGRALALNGAVRDADAIAVTWYLGTQTGTGVADVLFGDYNPSARLPISFPQVTGQQPYFYNHLRTGRPELPTLAEYKARWREMPNEPLYPFGYGLSYTTFAYAQPQLSTAQLGWDDTLAITTRVTNTGSVAGEEVVQLYVHDRVASRVRPVRELKGFRKVLLQPGESMDVVFTLARDALAFTNHKGVFGAEPGLFDVWVCASAKSGDAVAFELLEG
SIO_010081: PD885_RS01300
subclass of: SO_0000673
so part of: PD885_RS01300
location: 295049..297220
location: region:295049-297220:1
so has part: feature:295049-297220:1:exon

WP_002808337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295049-297220:1:exon

PD885_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01305
old locus tag: PD885_00250
so part of: sequence
location: complement(297544..298719)
location: region:297544-298719:-1
so has part: feature:297544-298719:-1:exon
subclass of: SO_0000010

61892728
type: Gene
SIO_000068: ncbigene

position:297544:-1
position: 297544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298719:-1
position: 298719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297544-298719:-1:exon

PD885_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01305
old locus tag: PD885_00250
EC number: 1.1.5.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003484599.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PQQ-dependent sugar dehydrogenase
translation: MSIRRLRALACSAALLTASAAIAASAGAPAASIPKAQWPFQATTIADFEEPWAMTFLPDGTLLVSEKRGALMRLDPKTKRQSAITSVPAVAYGGQGGFGDVLTHPRFAQNRLVYVSYAEPGQGDTSGAAVARAKLTLDATGGGTLSDLKVIWRQEPKVTGNGHFGHRLAFDQAGKLWISSSERQKFDPAQDMKANLGKLIRLNDDGSVPADNPFTAQGGVAAQVWSLGHRNILGIAFDNKGRLWEHEMGPAGGDELNLIQRGANYGYPIVSNGDHYDGTPIPDHTTRPEFAAPKISWTPVISPAGFVIYNGTQFPAWRGNGFIGGLSSMALVQVSLGDQPREVARYDMGARIREVEQGPDGALWLLEDEASGSTGRLLKLTPRNKAAENDA
SIO_010081: PD885_RS01305
subclass of: SO_0000673
so part of: PD885_RS01305
location: complement(297544..298719)
location: region:297544-298719:-1
so has part: feature:297544-298719:-1:exon

WP_002808335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297544-298719:-1:exon

PD885_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01310
pseudo: true
so part of: sequence
location: <298845..299118
location: region:298845-299118:1
so has part: feature:298845-299118:1:exon
subclass of: SO_0000010

61892729
type: Gene
SIO_000068: ncbigene

position:298845:1
position: 298845
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:299118:1
position: 299118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298845-299118:1:exon

PD885_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017159377.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: YiaA/YiaB family inner membrane protein
SIO_010081: PD885_RS01310
subclass of: SO_0000673
so part of: PD885_RS01310
location: <298845..299118
location: region:298845-299118:1
so has part: feature:298845-299118:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:298845-299118:1:exon

PD885_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01315
old locus tag: PD885_00252
so part of: sequence
location: complement(299174..299506)
location: region:299174-299506:-1
so has part: feature:299174-299506:-1:exon
subclass of: SO_0000010

61892730
type: Gene
SIO_000068: ncbigene

position:299174:-1
position: 299174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299506:-1
position: 299506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299174-299506:-1:exon

PD885_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01315
old locus tag: PD885_00252
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006452391.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVPYQIPGRAPDESRNQNVSNYWRERFTEEPYYTDGDRYEDYEPAYLAGHEARMREVALAYDQIEADLHKDWETNRGSSSLSWSKARHAVRRAWENAPDFVTGDEKSRP
SIO_010081: PD885_RS01315
subclass of: SO_0000673
so part of: PD885_RS01315
location: complement(299174..299506)
location: region:299174-299506:-1
so has part: feature:299174-299506:-1:exon

WP_002808332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299174-299506:-1:exon

PD885_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01320
old locus tag: PD885_00253
so part of: sequence
location: complement(299690..300187)
location: region:299690-300187:-1
so has part: feature:299690-300187:-1:exon
subclass of: SO_0000010

61892731
type: Gene
SIO_000068: ncbigene

position:299690:-1
position: 299690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300187:-1
position: 300187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299690-300187:-1:exon

PD885_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01320
old locus tag: PD885_00253
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017159376.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLRHVYSTSDLESAQRVLQAARSSGIDNDALSLIARSDIELQDMPDERKNAKTDFFPAAARGAATGGAAGLIAGLVAIAVPSIGLTLAGAGVMALAGALVGAWSSALIGATVPDPVRRLFEDEIQAGRVLVIIDADQASLQTAQSTVVAAGATQLPYDAASAAT
SIO_010081: PD885_RS01320
subclass of: SO_0000673
so part of: PD885_RS01320
location: complement(299690..300187)
location: region:299690-300187:-1
so has part: feature:299690-300187:-1:exon

WP_002808330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299690-300187:-1:exon

PD885_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01325
old locus tag: PD885_00254
so part of: sequence
location: complement(300275..301582)
location: region:300275-301582:-1
so has part: feature:300275-301582:-1:exon
subclass of: SO_0000010

61892732
type: Gene
SIO_000068: ncbigene

position:300275:-1
position: 300275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301582:-1
position: 301582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300275-301582:-1:exon

PD885_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01325
old locus tag: PD885_00254
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016902824.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: APC family permease
translation: MSTPTAPRDASGPVRVVSRWQIVGLSINDVIGSGIYLLPAATAALLGPMSLWAVMLAGLAVALLVLCYAQAASYFDTPGGSYLYTREAFGPFVGFQTGWMIWLTRISSAAALSNGLADAVARFWPTAATDQWASLLVVVGALGLLTAINVIGMKSAARTGIALVIGKLVPLLLFVAIGAFYVDWSWAFAGTTPDLRNLGNLGEAALLLLFAYAGFENIPAAAGEYRNPRRDVPFALITMIITVTMIYAAVQIVAQGTLPNLAASPTPLADAASRFGGEALALILTVGATISILGTTSNTVMLGPRLLFALAQDGYGPAFLARVHPRFHTPAAAVLTQGVLSLALALSGSFTQLALLSMVTRLFAYIGTAAAVIVLARRYRQRAETLRLPGGPAIPIAALLLSLGLLASASWQNLAAAGVALLVGGAFYLFPRKVA
SIO_010081: PD885_RS01325
subclass of: SO_0000673
so part of: PD885_RS01325
location: complement(300275..301582)
location: region:300275-301582:-1
so has part: feature:300275-301582:-1:exon

WP_002808329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300275-301582:-1:exon

PD885_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01330
old locus tag: PD885_00255
so part of: sequence
location: complement(301579..302358)
location: region:301579-302358:-1
so has part: feature:301579-302358:-1:exon
subclass of: SO_0000010

61892733
type: Gene
SIO_000068: ncbigene

position:301579:-1
position: 301579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302358:-1
position: 302358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301579-302358:-1:exon

PD885_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01330
old locus tag: PD885_00255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157008.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLAIPFRSVALLTLASFISLACAAAPIDALHQARALIVVTTPDWNSTQARLQTFTHVDGQWQPAAVPGFAVALGRHGSAWGEGLHPAQTQGPQKREGDGRSPAGVFAIGTAFGDAPRIESAMPYQAMSATNYCMDVPSSPLYNRIVDAAQVGEAAVAGSTEPMRPDLHHRSGARYSEGFVIAHNPKAIPGRGSCIFAHLWLTPGQSTSGCTAMAPADMRRLIAWLKPDDNPLLVLLPRAEYARLQTEWQLPVLAEAAP
SIO_010081: PD885_RS01330
subclass of: SO_0000673
so part of: PD885_RS01330
location: complement(301579..302358)
location: region:301579-302358:-1
so has part: feature:301579-302358:-1:exon

WP_002808327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301579-302358:-1:exon

PD885_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01335
old locus tag: PD885_00256
so part of: sequence
location: complement(302544..303641)
location: region:302544-303641:-1
so has part: feature:302544-303641:-1:exon
subclass of: SO_0000010

61892734
type: Gene
SIO_000068: ncbigene

position:302544:-1
position: 302544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303641:-1
position: 303641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302544-303641:-1:exon

PD885_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01335
old locus tag: PD885_00256
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005911472.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dipeptide epimerase
translation: MKITSFRLGMLRVPLKTPFNTAVRSVHAIEDVVVLLQTDGSHIGYGAAPATAPITGDTHGSIIAAIQHCIGPQLIGQDVADLNRLCGLVQHALERNTSAKAAVEIALYDLWAQAFGAPLYQLLGGGTPHITTDITISVDAIDTMVAQAQSALARGYRSLKIKVGKDPGSDVERVKAIHAAVDGSASLRLDANQGWTPKQAIRTMRTLEDAGIVLELLEQPVRAADIDGLAFVTARIDTPVMADESVFSPTQVIDLIQRRAADIVNIKLMKTGGLSNAIRVADVAALYGVPCMIGCMIESSVSVAAAVHLAVAKADSITLADLDAPALGQFDPTDGGVHFNAAQIHIDDSPGLGIGRIRGLELLPG
SIO_010081: PD885_RS01335
subclass of: SO_0000673
so part of: PD885_RS01335
location: complement(302544..303641)
location: region:302544-303641:-1
so has part: feature:302544-303641:-1:exon

WP_002808326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302544-303641:-1:exon

PD885_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01340
old locus tag: PD885_00257
so part of: sequence
location: complement(303638..305047)
location: region:303638-305047:-1
so has part: feature:303638-305047:-1:exon
subclass of: SO_0000010

61892735
type: Gene
SIO_000068: ncbigene

position:303638:-1
position: 303638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305047:-1
position: 305047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303638-305047:-1:exon

PD885_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01340
old locus tag: PD885_00257
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014501731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SH3 domain-containing protein
translation: MPLSRHLLTLLLVVAAPCIAAAATRYTPVQQMAPFVIGDAQLTPDYWIQRSRTAQTPRMNAMQIAGFNTHLMRDDASMHDLWQLPETLPAADVRARIQALSATPMRALYDANGNAIAATRLEALRNALALDALPDQVTPRFALVVKRAALRTFPTSQRVFTSTDDHDIDRFQESALYPGTPVAVLHGSADGAWQFVLAANYAAWVATDQIAEGSRAEVLDYAQRGSRMIVTGAHVQTAYTPELPAGSALTLDMGTNLPLLSDWPPQQPVHGQLPLAAYVVQLPLRIADGRLQLVPALIPRAADVRIGPLPASDAALLRQAFKFLGERYGWGNDYDARDCSGFVLDVYRSLGIVLPRNTGDQARSPVLRRVPFDVRAPMPQRLQQLAQVQIGDLIYLPGHVMLVIGHERGAPWVIHDVAGANYRAADGSVQRARLNGVSVTPLLPLLASDGTPFIDNITGIHRIVPIGSP
SIO_010081: PD885_RS01340
subclass of: SO_0000673
so part of: PD885_RS01340
location: complement(303638..305047)
location: region:303638-305047:-1
so has part: feature:303638-305047:-1:exon

WP_040762625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303638-305047:-1:exon

PD885_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01345
old locus tag: PD885_00258
so part of: sequence
location: 305542..306348
location: region:305542-306348:1
so has part: feature:305542-306348:1:exon
subclass of: SO_0000010

61892736
type: Gene
SIO_000068: ncbigene

position:305542:1
position: 305542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306348:1
position: 306348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305542-306348:1:exon

PD885_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01345
old locus tag: PD885_00258
EC number: 3.5.1.28
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016850303.1
GO function: GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO process: GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetylmuramoyl-L-alanine amidase
translation: MLSTSNLMSPVWLRPALCMVLLSLGACAHAPQRNPLAQWVPSPNYDARRPILIVLHFTGQHSVQQSLNTLRGRNSGGPVSAHYLIGEDGKRYQLVSDEQRAWHGGAGRWGTITDVNSASIGIELDNDGREAFAPAQIDSLLLLLEDLCTRLRIPRTQIVGHEDFAPTRKDDPGPLFPWKRLADAGFGRWPAADTPAAPADFDPWQALALVGYSLDDPAATLRAFYHHYRGNDTRTFDAEDLRILYALTGRLRPPSLPDAVEPLEGDSR
SIO_010081: PD885_RS01345
subclass of: SO_0000673
so part of: PD885_RS01345
location: 305542..306348
location: region:305542-306348:1
so has part: feature:305542-306348:1:exon

WP_002808324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305542-306348:1:exon

PD885_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01350
old locus tag: PD885_00259
so part of: sequence
location: 306458..307204
location: region:306458-307204:1
so has part: feature:306458-307204:1:exon
subclass of: SO_0000010

61892737
type: Gene
SIO_000068: ncbigene

position:306458:1
position: 306458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307204:1
position: 307204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306458-307204:1:exon

PD885_RS01350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01350
old locus tag: PD885_00259
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012444006.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M15 family metallopeptidase
translation: MKKTTLLQTSRCWRHLVAWGIVLLITTAPFAMIAADVHVSSAKTTAEAGLVDVHRLAPEIAVDMRYAGSNNFTGRVVPGYVAPTCYLLRPAAEALTRAARTLRAEGYRLQVFDCYRPVRAVQAFVTWAADLQDQSTKAQYYPRVDKRALLGDYIAQTSGHSRGATLDLGLLVCRWGPCRAVDMGTHFDFFDTRAHTDSPGISVAQRAHRQRLLRALAAEGFANYPTEWWHFTFRPEPTPDTAYDVPVD
SIO_010081: PD885_RS01350
subclass of: SO_0000673
so part of: PD885_RS01350
location: 306458..307204
location: region:306458-307204:1
so has part: feature:306458-307204:1:exon

WP_002808323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306458-307204:1:exon

PD885_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01355
old locus tag: PD885_00260
so part of: sequence
location: 307348..307545
location: region:307348-307545:1
so has part: feature:307348-307545:1:exon
subclass of: SO_0000010

61892738
type: Gene
SIO_000068: ncbigene

position:307348:1
position: 307348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307545:1
position: 307545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307348-307545:1:exon

PD885_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01355
old locus tag: PD885_00260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016903162.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CPXCG motif-containing cysteine-rich protein
translation: MSEPERFVDIACPYCGEWITLALDLTGGDQHYIEDCQVCCKPISVGVQWDEQGEAQVRARGQNDA
SIO_010081: PD885_RS01355
subclass of: SO_0000673
so part of: PD885_RS01355
location: 307348..307545
location: region:307348-307545:1
so has part: feature:307348-307545:1:exon

WP_002808322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307348-307545:1:exon

PD885_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01360
old locus tag: PD885_00261
so part of: sequence
location: 307663..308043
location: region:307663-308043:1
so has part: feature:307663-308043:1:exon
subclass of: SO_0000010

61892739
type: Gene
SIO_000068: ncbigene

position:307663:1
position: 307663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308043:1
position: 308043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307663-308043:1:exon

PD885_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01360
old locus tag: PD885_00261
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019302270.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNLPLHFGLLGSLEAGSIALILGVLVFAAVEHIGRRLHFTYGHTLGVLTVAFGAGYDIWNLLYTSIVRLESPLYARVALIKIQDPNALGSRMVLEVVGAIAGVVVGWKPFSSGRWDDAASRSEISA
SIO_010081: PD885_RS01360
subclass of: SO_0000673
so part of: PD885_RS01360
location: 307663..308043
location: region:307663-308043:1
so has part: feature:307663-308043:1:exon

WP_002808321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307663-308043:1:exon

PD885_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01365
old locus tag: PD885_00262
so part of: sequence
location: 308257..308616
location: region:308257-308616:1
so has part: feature:308257-308616:1:exon
subclass of: SO_0000010

61892740
type: Gene
SIO_000068: ncbigene

position:308257:1
position: 308257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308616:1
position: 308616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308257-308616:1:exon

PD885_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01365
old locus tag: PD885_00262
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005927053.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNRTSLLAATAALAAALALPAMAQSPAQDAAAQSGSSAASATSAQSSGASSGGGQTWASVDTDSDGTINKQEAQVNAGLVQIYDQADGNTDGKLTTDEYKAFVAKQQSGGAATGSQGN
SIO_010081: PD885_RS01365
subclass of: SO_0000673
so part of: PD885_RS01365
location: 308257..308616
location: region:308257-308616:1
so has part: feature:308257-308616:1:exon

WP_002808320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308257-308616:1:exon

PD885_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01370
old locus tag: PD885_00263
so part of: sequence
location: 308845..309276
location: region:308845-309276:1
so has part: feature:308845-309276:1:exon
subclass of: SO_0000010

61892741
type: Gene
SIO_000068: ncbigene

position:308845:1
position: 308845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309276:1
position: 309276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308845-309276:1:exon

PD885_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01370
old locus tag: PD885_00263
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019302268.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPQLRIALLVGLSGPMLALAAPPKLPQANPAPVVPATRGASSMLPLPIDPTTPATTPLLPVDASGPSSTKSGADASVAPAGTLAPRSFRSLDTDADGLLIVAEAGADPILRENFAGFDSNGDGRLSRDEFASYQPGPGDAAGD
SIO_010081: PD885_RS01370
subclass of: SO_0000673
so part of: PD885_RS01370
location: 308845..309276
location: region:308845-309276:1
so has part: feature:308845-309276:1:exon

WP_002808319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308845-309276:1:exon

PD885_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01375
old locus tag: PD885_00264
so part of: sequence
location: 309314..310072
location: region:309314-310072:1
so has part: feature:309314-310072:1:exon
subclass of: SO_0000010

61892742
type: Gene
SIO_000068: ncbigene

position:309314:1
position: 309314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310072:1
position: 310072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309314-310072:1:exon

PD885_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01375
old locus tag: PD885_00264
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016903158.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD family hydrolase
translation: MTSFAQREGQAIQLVGFDGDDTLWKSEDYYRSAEAEFEAILAGYLDLGYSRMQQHLLAVERRNLKVFGYGAKGMTLSMIETAIELTQARIDARDIQRVIEIGRATLQHPVEVIAGVREAVGAIAADYAVVLITKGDLFHQEQKIEQSGLADLFPRVEVVSEKDPKTYARVLREFDLPAHRFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWTHEQEHGVAADEPHMREVSAAAGWPAAVHALDAVARQHAPG
SIO_010081: PD885_RS01375
subclass of: SO_0000673
so part of: PD885_RS01375
location: 309314..310072
location: region:309314-310072:1
so has part: feature:309314-310072:1:exon

WP_002808318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309314-310072:1:exon

PD885_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01380
old locus tag: PD885_00265
so part of: sequence
location: complement(310425..311393)
location: region:310425-311393:-1
so has part: feature:310425-311393:-1:exon
subclass of: SO_0000010

61892743
type: Gene
SIO_000068: ncbigene

position:310425:-1
position: 310425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311393:-1
position: 311393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310425-311393:-1:exon

PD885_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01380
old locus tag: PD885_00265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MQLTFGDAEGLGKRKQTRREIFLAEMEQVVPWRHLLGLIAPHYPVSGRPGRQPYALATMLRIHLLQQWYALSDPAMEEALHQIPTLRRFARLGGLDNVPDETTILNFRRLLETHGLAARMLEAVNADLVRKGQSLRSGTIVDATLIAAPSSTKNTDRARDPEMHQTKKGNQWYFGMKAPIGVDEFSGLVHHVRCTAANVADVTVTHALLHGKEDSVFGDSGYTGADKREELQTCKAGFFIAAKRSTIQAIGNKRERRQEERWEYFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAHVLTLFALSNLWMVRRQLLPARG
SIO_010081: PD885_RS01380
subclass of: SO_0000673
so part of: PD885_RS01380
location: complement(310425..311393)
location: region:310425-311393:-1
so has part: feature:310425-311393:-1:exon

WP_002801490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310425-311393:-1:exon

PD885_RS20290
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS20290
pseudo: true
so part of: sequence
location: <311458..311658
location: region:311458-311658:1
so has part: feature:311458-311658:1:exon
subclass of: SO_0000010

61896313
type: Gene
SIO_000068: ncbigene

position:311458:1
position: 311458
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:311658:1
position: 311658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311458-311658:1:exon

PD885_RS20290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS20290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011037261.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1595 family transposase
SIO_010081: PD885_RS20290
subclass of: SO_0000673
so part of: PD885_RS20290
location: <311458..311658
location: region:311458-311658:1
so has part: feature:311458-311658:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:311458-311658:1:exon

PD885_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01385
old locus tag: PD885_00266
so part of: sequence
location: complement(311780..312211)
location: region:311780-312211:-1
so has part: feature:311780-312211:-1:exon
subclass of: SO_0000010

61892744
type: Gene
SIO_000068: ncbigene

position:311780:-1
position: 311780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312211:-1
position: 312211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311780-312211:-1:exon

PD885_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01385
old locus tag: PD885_00266
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006451716.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Na+/H+ antiporter subunit G
translation: MIALTEYLLSALLLVGTFFILIGAFGLVKLSDFFKRLHAPTNASTLGVGCVLLASVGYHLFLGVDPQPRELLITVFLFITAPISAHLMAKAALSLMMENRPEVPNHGQMHREAVPQLQGDAGEDGQSEKQHPGPQSEQHQASS
SIO_010081: PD885_RS01385
subclass of: SO_0000673
so part of: PD885_RS01385
location: complement(311780..312211)
location: region:311780-312211:-1
so has part: feature:311780-312211:-1:exon

WP_002808317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311780-312211:-1:exon

PD885_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01390
old locus tag: PD885_00267
so part of: sequence
location: complement(312208..312492)
location: region:312208-312492:-1
so has part: feature:312208-312492:-1:exon
subclass of: SO_0000010

61892745
type: Gene
SIO_000068: ncbigene

position:312208:-1
position: 312208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312492:-1
position: 312492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312208-312492:-1:exon

PD885_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01390
old locus tag: PD885_00267
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014501684.1
GO function: GO:0015075 - monoatomic ion transmembrane transporter activity [Evidence IEA]
GO process: GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: K+/H+ antiporter subunit F
translation: MTGHMFIESTIVICTHAVGLAMLMALWRLLRGPTVPDRILALDTLSITAIAELMLWGMYLDSPIYFEAALVIAMLGFGSTVVLSKYVLRRSIVE
SIO_010081: PD885_RS01390
subclass of: SO_0000673
so part of: PD885_RS01390
location: complement(312208..312492)
location: region:312208-312492:-1
so has part: feature:312208-312492:-1:exon

WP_002808316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312208-312492:-1:exon

PD885_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01395
old locus tag: PD885_00268
so part of: sequence
location: complement(312489..312995)
location: region:312489-312995:-1
so has part: feature:312489-312995:-1:exon
subclass of: SO_0000010

61892746
type: Gene
SIO_000068: ncbigene

position:312489:-1
position: 312489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312995:-1
position: 312995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312489-312995:-1:exon

PD885_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01395
old locus tag: PD885_00268
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007967828.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Na+/H+ antiporter subunit E
translation: MTRQVPLKRRMFPSPPLSVTVFVFWLLLSDSFGPQQWVLGALLGWVVPMFAARLDREFAQIGSLRSVPRMLLVAAGDIVRSNIQVAGQVLGPESHIHPGFIWVPLDIANIHGIAALTSMITLTPGTVSAALSEDRHYLLVHVLHLDDPDALIAQIKNRYEKPLMEIFP
SIO_010081: PD885_RS01395
subclass of: SO_0000673
so part of: PD885_RS01395
location: complement(312489..312995)
location: region:312489-312995:-1
so has part: feature:312489-312995:-1:exon

WP_002808313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312489-312995:-1:exon

PD885_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01400
old locus tag: PD885_00269
so part of: sequence
location: complement(312992..314536)
location: region:312992-314536:-1
so has part: feature:312992-314536:-1:exon
subclass of: SO_0000010

61892747
type: Gene
SIO_000068: ncbigene

position:312992:-1
position: 312992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314536:-1
position: 314536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312992-314536:-1:exon

PD885_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01400
old locus tag: PD885_00269
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017161271.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: monovalent cation/H+ antiporter subunit D
translation: MNHLPILPILIPMLGASASLFVEHRRYGPRVQRTVAWVSMALLAAAVIALFARAADGKVLVYLLGDWPARIGIVLMGDRLSAWMLLTTLILGAACLLHACAGWDRRAPHFHALFQFQLMGLNGAFLTGDIFNLFVFFEVMLIASYGLLLSGGRGLQMRVGLHYVVFNVCASTLFLIALGLLFGVFGTLNMAELSHRIADLPAQHVPLAKATLGLLLLVFCSKAALLPLYLWLPETYSRAPAAVAALFAIMTKVGLYATLRVSSLWFGVSAGALHGFGRHALLWLGIATLLMAAFGVMAASRLRVMVSYLVVFSAATLFIAFSLDDAGAVGAGLYYLPHSSFVAAALFMVSDLIRRRCGSASDRKEVVAPLPRRGKPGTMFMIAAIAVAGLPPLSGFLAKVALLQHVPAGLVGPVWAAILGSSLLVVIGLTRAGVRLFWRVPAAVEGAPELQPQRRGRMRPVETAATVVLLTGLVAMTVAAGPLMRYTNAAGAQLRDPGAYVQQVRATTPQRRQP
SIO_010081: PD885_RS01400
subclass of: SO_0000673
so part of: PD885_RS01400
location: complement(312992..314536)
location: region:312992-314536:-1
so has part: feature:312992-314536:-1:exon

WP_002808311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312992-314536:-1:exon

PD885_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01405
old locus tag: PD885_00270
so part of: sequence
location: complement(314533..314907)
location: region:314533-314907:-1
so has part: feature:314533-314907:-1:exon
subclass of: SO_0000010

61892748
type: Gene
SIO_000068: ncbigene

position:314533:-1
position: 314533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314907:-1
position: 314907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314533-314907:-1:exon

PD885_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01405
old locus tag: PD885_00270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011346152.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Na+/H+ antiporter subunit C
translation: MELAVASAIGVLAALAIYLLLRARSFDVILGMTFLSYATNLLIFAGGRLRSGQAPVLRDGVPADLMHSTDPLPQALVLTAIVIAFAMTAVSLVLAIRSRSDNRSDHVDAHEDAATGVDTRQARR
SIO_010081: PD885_RS01405
subclass of: SO_0000673
so part of: PD885_RS01405
location: complement(314533..314907)
location: region:314533-314907:-1
so has part: feature:314533-314907:-1:exon

WP_002808294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314533-314907:-1:exon

PD885_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01410
old locus tag: PD885_00271
so part of: sequence
location: complement(314907..317735)
location: region:314907-317735:-1
so has part: feature:314907-317735:-1:exon
subclass of: SO_0000010

61892749
type: Gene
SIO_000068: ncbigene

position:317735:-1
position: 317735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314907-317735:-1:exon

PD885_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01410
old locus tag: PD885_00271
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019302198.1
GO function: GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO process: GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: monovalent cation/H+ antiporter subunit A
translation: MPFSLEILLALPFIMAAATALLWRTSRSITAWLAAAAPLAGLLVLALLTPAVLRGEVIGSEHAWLPQIGLMFSLRLDGLAWMFALLVLGIGALVVMYAHYYLSARDSASRFFAYLMLFMGAMLGMVLSGNLLLLMVFWELTSISSFLLIGFWSHRKDAREGARMAFVLTAGGGLALLGGVLMIGRIVGSFQLDAVLAAGDVIRASPLYPYALGLVLLGIFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLHPALAGTDLFLYTVTSIGAITLLLGAWHAIFQHDLKGVLAYSTISHLGLITMLFGLSTPMAMVAGVFHILNHALFKASLFMAAGIIDHETGTRDMRKLGNLRRLMPVTSALAITASLAMAGVPLLNGFLSKEMFFAVALETEAPQLMRILASIAALLAGLLGVAYSLRFVHDTFFGEGPRDLDTTPHERPGWMRIPVDVLVLTCVAVGIVPAWTVAPVLRAGASAILGGKLPDYSLALWHGFNWPLAMSVAGMIGGMLLYMALRRTLDLYAIQNRSPGKALFQWNQRALFAGAARMTDAVTNGNLQRMLMLLVLSAVVVALVPFLQGGTLADWPAPTPMPLLGWMVWLLMMACALGSLFLYQQRLLAVLVLGGTGLAVSLTFVFLSAPDLALTQLLVEMVTLVLMLLAMNYLPERSLPERARLRKIRDASIAIVCGAGLAALAYTLMTQPSRTVAGELLQRALPEAYGRNVVNVILVDFRSFDTFGEITVFAIAGLVVHALLRRSRMAPERTMPGPPIKLPVPADLAQIMFPLTLTVSLFLFLRGHNAPGGGFIAGLVLAVSLLMQYVIQGNASVELRFGFDYIRLIGIGLLCALVSGAGSLVFGMPFLSSGHLEIPLPLLGKLELASALGLDIGVYLVVFGAAMLMLSMMGTIKPSRTRSSQRGEIDPTQRSTRTAEQH
SIO_010081: PD885_RS01410
subclass of: SO_0000673
so part of: PD885_RS01410
location: complement(314907..317735)
location: region:314907-317735:-1
so has part: feature:314907-317735:-1:exon

WP_088056612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314907-317735:-1:exon

PD885_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01415
old locus tag: PD885_00272
so part of: sequence
location: 317903..318805
location: region:317903-318805:1
so has part: feature:317903-318805:1:exon
subclass of: SO_0000010

61892750
type: Gene
SIO_000068: ncbigene

position:317903:1
position: 317903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318805:1
position: 318805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317903-318805:1:exon

PD885_RS01415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01415
old locus tag: PD885_00272
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002808289.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent epimerase/dehydratase family protein
translation: MTAANPHPSTAASAPRALVFGGSGQIGERLLMRLLSRGWQVTAWSRQPRAARSGLIWRQGDLAVPAAAGAAFEVIFSCGPLDHFARWYAENPVLAPRIVAFGSTSVEVKQHSIDAAERDLAQRLANAEQALFSAAQARGATATVLRPTLVYGAGRDLTLSRIAGLAQRTGAFVLPANATGLRQPVHVDDLASAALAVVTQPATQQRSYAVGGGEVLAYTQMVQRVLEALPRPARLYRVQPRLFGFALTVAQRLGWLPGMNAAALQRMRDDLVFDLEPARRDFGYAPRAFRPLPEELGIGE
SIO_010081: PD885_RS01415
subclass of: SO_0000673
so part of: PD885_RS01415
location: 317903..318805
location: region:317903-318805:1
so has part: feature:317903-318805:1:exon

WP_002808289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317903-318805:1:exon

PD885_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01420
so part of: sequence
location: 319126..319924
location: region:319126-319924:1
so has part: feature:319126-319924:1:exon
subclass of: SO_0000010

61892751
type: Gene
SIO_000068: ncbigene

position:319126:1
position: 319126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319924:1
position: 319924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319126-319924:1:exon

PD885_RS01420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MRQKTYPSDMSRERFEHILPILEQARKRTKPRRVDMYEVWCAVLYVLRTGCQWRALPSDFPKWRTVHAYFAKWSECDDEGVSLLERALKKSQVGVARQKQERNIFSRFLIVDAQSVKNTDTAGQKGYDAGKKVSGIKRHIAVDTQGLPHAIAVTTAEVTDRKGALQALERCQSNLTHVQSLLCDSGYTGVPFAEGVREILGEQLTVQIAKRSELHTFKVMPKRWIVERSFAWLEKNRRLWKNCERKLNTSLQFIHLAFLALLLKRS
SIO_010081: PD885_RS01420
subclass of: SO_0000673
so part of: PD885_RS01420
location: join(319126..319397,319396..319924)
location: region:319126-319924:1
so has part: feature:319126-319397:1:exon
so has part: feature:319396-319924:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:319126-319397:1:exon

position:319397:1
position: 319397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:319396-319924:1:exon

position:319396:1
position: 319396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PD885_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01425
old locus tag: PD885_00274
pseudo: true
so part of: sequence
location: complement(319957..321313)
location: region:319957-321313:-1
so has part: feature:319957-321313:-1:exon
subclass of: SO_0000010

61892752
type: Gene
SIO_000068: ncbigene

position:319957:-1
position: 319957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321313:-1
position: 321313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319957-321313:-1:exon

PD885_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01425
old locus tag: PD885_00274
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035783.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: PD885_RS01425
subclass of: SO_0000673
so part of: PD885_RS01425
location: complement(319957..321313)
location: region:319957-321313:-1
so has part: feature:319957-321313:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:319957-321313:-1:exon

PD885_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01430
old locus tag: PD885_00276
so part of: sequence
location: complement(321462..321947)
location: region:321462-321947:-1
so has part: feature:321462-321947:-1:exon
subclass of: SO_0000010

61892753
type: Gene
SIO_000068: ncbigene

position:321462:-1
position: 321462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321947:-1
position: 321947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321462-321947:-1:exon

PD885_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01430
old locus tag: PD885_00276
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008575562.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF962 domain-containing protein
translation: MTERSTTARPIDRYFASYSDDHQNATNQQIHVLAVPAVLWSVVALLWCIPVGGTLFTSGIWAALSMFAAWSYYNRLSRQLGLGMLGVFFFFGCLCRLIEGSIGLTGLFTAALTVFVVAWIAQFVGHTIEGRKPSFLTDLTYLLIGPIWLLAKLYRQLRWRY
SIO_010081: PD885_RS01430
subclass of: SO_0000673
so part of: PD885_RS01430
location: complement(321462..321947)
location: region:321462-321947:-1
so has part: feature:321462-321947:-1:exon

WP_002808284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321462-321947:-1:exon

PD885_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01435
pseudo: true
so part of: sequence
location: complement(322048..>322393)
location: region:322048-322393:-1
so has part: feature:322048-322393:-1:exon
subclass of: SO_0000010

61892754
type: Gene
SIO_000068: ncbigene

position:322048:-1
position: 322048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322393:-1
position: 322393
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322048-322393:-1:exon

PD885_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007967835.1
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: M4 family metallopeptidase
SIO_010081: PD885_RS01435
subclass of: SO_0000673
so part of: PD885_RS01435
location: complement(322048..>322393)
location: region:322048-322393:-1
so has part: feature:322048-322393:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:322048-322393:-1:exon

PD885_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01440
so part of: sequence
location: 322442..323240
location: region:322442-323240:1
so has part: feature:322442-323240:1:exon
subclass of: SO_0000010

61892755
type: Gene
SIO_000068: ncbigene

position:322442:1
position: 322442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323240:1
position: 323240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322442-323240:1:exon

PD885_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MRQKTYPSDMSRERFEHILPILEQARKRTKPRRVDMYEVWCAVLYVLRTGCQWRALPSDFPKWRTVHAYFAKWSECDDEGVSLLERALKKSQVGVARQKQERNIFSRFLIVDAQSVKNTDTAGQKGYDAGKKVSGIKRHIAVDTQGLPHAIAVTTAEVTDRKGALQALERCQSNLTHVQSLLCDSGYTGVPFAEGVREILGEQLTVQIAKRSELHTFKVMPKRWIVERSFAWLEKNRRLWKNCERKLNTSLQFIHLAFLALLLKRS
SIO_010081: PD885_RS01440
subclass of: SO_0000673
so part of: PD885_RS01440
location: join(322442..322713,322712..323240)
location: region:322442-323240:1
so has part: feature:322442-322713:1:exon
so has part: feature:322712-323240:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:322442-322713:1:exon

position:322713:1
position: 322713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:322712-323240:1:exon

position:322712:1
position: 322712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PD885_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01445
old locus tag: PD885_00279
pseudo: true
so part of: sequence
location: complement(<323252..>323705)
location: region:323252-323705:-1
so has part: feature:323252-323705:-1:exon
subclass of: SO_0000010

61892756
type: Gene
SIO_000068: ncbigene

position:323252:-1
position: 323252
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:323705:-1
position: 323705
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323252-323705:-1:exon

PD885_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01445
old locus tag: PD885_00279
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007967835.1
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: M4 family metallopeptidase
SIO_010081: PD885_RS01445
subclass of: SO_0000673
so part of: PD885_RS01445
location: complement(<323252..>323705)
location: region:323252-323705:-1
so has part: feature:323252-323705:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323252-323705:-1:exon

PD885_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01450
old locus tag: PD885_00280
so part of: sequence
location: complement(323960..324886)
location: region:323960-324886:-1
so has part: feature:323960-324886:-1:exon
subclass of: SO_0000010

61892757
type: Gene
SIO_000068: ncbigene

position:323960:-1
position: 323960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324886:-1
position: 324886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323960-324886:-1:exon

PD885_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01450
old locus tag: PD885_00280
EC number: 6.3.2.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006448471.1
GO function: GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO process: GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylaminoimidazolesuccinocarboxamide synthase
translation: MSTTLLQSDLPGLPLRHRGKVRDVFAIPRDRLPANAPPGDYLLMVATDRLSAFDVVLPDPIPGKGEMLCQVSNFWFHKTEHLMPNHLVDITVDQVLPEGVDPALYAKRAVVTRKLKPVPVEAIARGYLIGSGWKDYQRTGKISGIELPDGLRQAQKLPEPIFTPSTKAAVGDHDENIDFDAMVKTVGAELAERVRDATLRIYRFAADYAAECGILLADTKFEFGTDADGRLYIMDEMLTPDSSRYWPADQYELGTSPPSYDKQFVRDYLETLDWGKTAPGPSLPAEVIERTRAKYAEALQRLANISVG
SIO_010081: PD885_RS01450
subclass of: SO_0000673
so part of: PD885_RS01450
location: complement(323960..324886)
location: region:323960-324886:-1
so has part: feature:323960-324886:-1:exon

WP_040762623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323960-324886:-1:exon

PD885_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01455
old locus tag: PD885_00281
so part of: sequence
location: 325093..325422
location: region:325093-325422:1
so has part: feature:325093-325422:1:exon
subclass of: SO_0000010

61892758
type: Gene
SIO_000068: ncbigene

position:325093:1
position: 325093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325422:1
position: 325422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325093-325422:1:exon

PD885_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01455
old locus tag: PD885_00281
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: J domain-containing protein
translation: MSWYGKLLGALAGALLFRGAPVVGLMIGLAIGHAVDAGWFKRRAENPYEPLGLEPDATTAEIDLAYRRLMSRYHPDKVTNADPEARRQAEKKASQINAAYDRIQRLRKR
SIO_010081: PD885_RS01455
subclass of: SO_0000673
so part of: PD885_RS01455
location: 325093..325422
location: region:325093-325422:1
so has part: feature:325093-325422:1:exon

WP_002808280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325093-325422:1:exon

PD885_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01460
old locus tag: PD885_00282
so part of: sequence
location: complement(325561..326400)
location: region:325561-326400:-1
so has part: feature:325561-326400:-1:exon
subclass of: SO_0000010

61892759
type: Gene
SIO_000068: ncbigene

position:325561:-1
position: 325561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326400:-1
position: 326400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325561-326400:-1:exon

PD885_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01460
old locus tag: PD885_00282
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015471660.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane beta-barrel protein
translation: METTPLASAAFALLALTPSAWAQSGPADWSGFSIGANVGGADLSGVSGGRLGFDTNLDGREGDQVSTATGADAFSPGFCGGAAAGRTPASGCSNDKGGVEYGARLGYDWQAGNWVYGVVAEYTRNDLRDSVSAFSTTPAFYTFTRQLNRTAALRGRIGHAFGEQGDYLAYFTAGVARGEFDHSFSSSNTANSFTSSGGDSADGYQAGLGLQRRLSDNVAVGVEYLFTRLQDEDTRVRVGPGTAPATNPFLRVNPAGTDLRRSDTDFSSNAVRLTATYRF
SIO_010081: PD885_RS01460
subclass of: SO_0000673
so part of: PD885_RS01460
location: complement(325561..326400)
location: region:325561-326400:-1
so has part: feature:325561-326400:-1:exon

WP_088056613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325561-326400:-1:exon

PD885_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: rpe
locus tag: PD885_RS01465
old locus tag: PD885_00283
so part of: sequence
location: 326523..327194
location: region:326523-327194:1
so has part: feature:326523-327194:1:exon
subclass of: SO_0000010

61892760
type: Gene
SIO_000068: ncbigene

position:326523:1
position: 326523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327194:1
position: 327194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326523-327194:1:exon

PD885_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: rpe
locus tag: PD885_RS01465
old locus tag: PD885_00283
EC number: 5.1.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010379428.1
GO function: GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO process: GO:0006098 - pentose-phosphate shunt [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribulose-phosphate 3-epimerase
translation: MQPTAIAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKHGITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNPATPVDILEWVLPELDLVLVMSVNPGFGGQAFILSALDKLRAIRTQIDALGKPIRLEIDGGVKANNIGAIAAAGADTFVAGSAIFNAPDYADVIAQMRAAVDAVR
SIO_010081: PD885_RS01465
subclass of: SO_0000673
so part of: PD885_RS01465
location: 326523..327194
location: region:326523-327194:1
so has part: feature:326523-327194:1:exon

WP_002808276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326523-327194:1:exon

PD885_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01470
old locus tag: PD885_00284
so part of: sequence
location: 327191..327682
location: region:327191-327682:1
so has part: feature:327191-327682:1:exon
subclass of: SO_0000010

61892761
type: Gene
SIO_000068: ncbigene

position:327191:1
position: 327191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327682:1
position: 327682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327191-327682:1:exon

PD885_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01470
old locus tag: PD885_00284
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012437189.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MSPTTLQIRAATPDDAPLLHALITALAVYEREPDAVKASPEDLRASLFGDGATAHALICEHHGQALGFAVYFFNYSTWLGRNGLYLEDLFVRPQARGRGAGLALLRHLAQLAVQRGCGRFEWSVLDWNQPAIDFYQAVGARPMNGWTMYRLDGERLVAFAAGA
SIO_010081: PD885_RS01470
subclass of: SO_0000673
so part of: PD885_RS01470
location: 327191..327682
location: region:327191-327682:1
so has part: feature:327191-327682:1:exon

WP_002808274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327191-327682:1:exon

PD885_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: yegS
locus tag: PD885_RS01475
old locus tag: PD885_00285
so part of: sequence
location: 327920..328849
location: region:327920-328849:1
so has part: feature:327920-328849:1:exon
subclass of: SO_0000010

61892762
type: Gene
SIO_000068: ncbigene

position:327920:1
position: 327920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328849:1
position: 328849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327920-328849:1:exon

PD885_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: yegS
locus tag: PD885_RS01475
old locus tag: PD885_00285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016901369.1
GO component: GO:0005575 - cellular_component [Evidence IEA]
GO function: GO:0001727 - lipid kinase activity [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid kinase YegS
translation: MAPLHWRLILNGKSTDNPDLREAVGTLRKRGIQLDVRVTWEDGDAERYVGEAVADGVHTVVAAGGDGTLSEVAAALAHHDADAATLPSLGLVPLGTANDFATAATLPIEPFNALNLIAERAAQPIDLLRIDAEHGPHWCANVASGGFGTQVTVETDEGLKKMLGGLAYLITGMSRLGRIDPISARFSGPDFDWEGEFIALGLGNGRQAGGGQALCPEALIDDGLLDVTIVPALNGEVAATLGALVTGGKQAALERVAVRARLPWLEISSHQPLTLNLDGEPETSLHFRIECAPARLRMHLPVDCPLLGV
SIO_010081: PD885_RS01475
subclass of: SO_0000673
so part of: PD885_RS01475
location: 327920..328849
location: region:327920-328849:1
so has part: feature:327920-328849:1:exon

WP_002808273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327920-328849:1:exon

PD885_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: trpE
locus tag: PD885_RS01480
old locus tag: PD885_00286
so part of: sequence
location: 329112..330587
location: region:329112-330587:1
so has part: feature:329112-330587:1:exon
subclass of: SO_0000010

61892763
type: Gene
SIO_000068: ncbigene

position:329112:1
position: 329112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330587:1
position: 330587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329112-330587:1:exon

PD885_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: trpE
locus tag: PD885_RS01480
old locus tag: PD885_00286
EC number: 4.1.3.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008575582.1
GO function: GO:0004049 - anthranilate synthase activity [Evidence IEA]
GO process: GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anthranilate synthase component I
translation: MITAEQFQRQAAEGHTRIPVVREVLSDLDTPLSVYLKLADGAYTYLFESVEGGERFGRYSIIGLPARRVYSFRGHTLDISEHGEVLETREVADPLAEVDALRAEHSVPQLDGLPGFTGGLVGWFGFECIQYIEPRLGSGDKPDELGTPDILLMLSEELAVFDNLKGRLYLIVHADPRQPQAYVRANRRLDELAHRLRQGGAGYPQAQISDAIDEADFHSSFTREEYHAVVRKAQEYVRAGDIFQVVPSQRLRVPFRARSVDVYRALRALNPSPYMYFLDVGGTQVVGSSPEILARLRDGVVTVRPIAGTRPRGATAEQDKALEAELLADPKERAEHVMLIDLGRNDVGRVAEPSTVTVGEQFVIERYSHVMHIVSEVTGTLKAGLNYSDVLRATFPAGTVSGAPKIRALEIIRELEPVKRNVYSGAVGYIGWHGDADTAIAIRTAVIQDGYLYVQAGGGVVYDSDPDLEWQETMNKGRALFRAVAQAAKGL
SIO_010081: PD885_RS01480
subclass of: SO_0000673
so part of: PD885_RS01480
location: 329112..330587
location: region:329112-330587:1
so has part: feature:329112-330587:1:exon

WP_002808272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329112-330587:1:exon

PD885_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01485
old locus tag: PD885_00288
so part of: sequence
location: complement(330720..332072)
location: region:330720-332072:-1
so has part: feature:330720-332072:-1:exon
subclass of: SO_0000010

61892764
type: Gene
SIO_000068: ncbigene

position:330720:-1
position: 330720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332072:-1
position: 332072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330720-332072:-1:exon

PD885_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01485
old locus tag: PD885_00288
EC number: 6.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003466434.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine synthetase family protein
translation: MKQDELEVAVASGVIDTVMVCMVDMQGRLMGKRCHADFFIRHGYEKNHACNYLLADDMDMVPVPGYASASWTGGYGDFVLKPDLSTLRLLPWLNATALVICDVYDDNGMPVGHSPRQILKKQLQRLSDRGMRASFASELEFYLFDDSYDAIWKKKYHGMETLGNYNQDYHILSTTRQEHVMRPIRNGLYGAGIAIECTKGEGGPGQAEINVRYADPLLMADHHTIIKHGSKEIAAQHGKAITYMAKWDDELAGSSSHVHSSLWSLEGRSLFYDQAASHGMSDVMQRYLSGMLKYAGDITLLLAPYINSYKRFQIGTFAPTKVAWGHENRTTGFRVCGQGSDAVRVECRIGGADMNPYLAFAGLIAAGLAGIDEKLSLPEPFAGDAYHGKGLPEIPKTLRAAIDISSQSKWLHEVLGDEVVNHYIHAAQWEQAEYDRRVTDWELLRGFERG
SIO_010081: PD885_RS01485
subclass of: SO_0000673
so part of: PD885_RS01485
location: complement(330720..332072)
location: region:330720-332072:-1
so has part: feature:330720-332072:-1:exon

WP_002808270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330720-332072:-1:exon

PD885_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01490
old locus tag: PD885_00289
so part of: sequence
location: complement(332200..333111)
location: region:332200-333111:-1
so has part: feature:332200-333111:-1:exon
subclass of: SO_0000010

61892765
type: Gene
SIO_000068: ncbigene

position:332200:-1
position: 332200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333111:-1
position: 333111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332200-333111:-1:exon

PD885_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01490
old locus tag: PD885_00289
EC number: 2.3.1.46
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003477135.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: homoserine O-succinyltransferase
translation: MPIKMPKGLPSRHILETEGLTLIDEEILVDPHQRALRVGLLNLMPNKTSTETQIARLLGATPFHVELILIRTSSHAPKNTPIAHLVSFYESWVDIKEQMFDGFIITGAPVEKIPFERVDYWEELTKILRWTQTNVRSCLNICWGAQAAMYYFHGMPKYTLDEKAFGVFRHYILKGESPYLSGLSDDFYIPVSRWTEMRQADIPVDSGVSVLIDSPDTGLCLLSDPKHHALHFFNHIEYESHTLADEYFRDLKMGREINFPKNYFPDDREDIQPKNQWHSHAHLLFGNWLTQMFKSHVGPKIFP
SIO_010081: PD885_RS01490
subclass of: SO_0000673
so part of: PD885_RS01490
location: complement(332200..333111)
location: region:332200-333111:-1
so has part: feature:332200-333111:-1:exon

WP_040762622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332200-333111:-1:exon

PD885_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01495
old locus tag: PD885_00290
so part of: sequence
location: complement(333200..333913)
location: region:333200-333913:-1
so has part: feature:333200-333913:-1:exon
subclass of: SO_0000010

61892766
type: Gene
SIO_000068: ncbigene

position:333200:-1
position: 333200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333913:-1
position: 333913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333200-333913:-1:exon

PD885_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01495
old locus tag: PD885_00290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003466428.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysE family translocator
translation: MPAKYIWPRCHRQDSCSADVQEIFLLIQANTQSHIFKFMDIKLTVLFAIAFTCAVAVPGPNVAFAIAQALKHGIKIIAPCSFGFGLATAIHAAVAFSGIGLVIQECPLILNYLRWIGAIYLTYLALVAFFYKPGQRGVQVMDSGPWKIFADTLLVALTNPKGWLATLLTYPSFISPRFSYVQQAITLSLAGMVISFFIYGGYMLLAQKARSIFDNEYKINLFTGFIYAIVAAFLAII
SIO_010081: PD885_RS01495
subclass of: SO_0000673
so part of: PD885_RS01495
location: complement(333200..333913)
location: region:333200-333913:-1
so has part: feature:333200-333913:-1:exon

WP_002808268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333200-333913:-1:exon

PD885_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01500
old locus tag: PD885_00291
so part of: sequence
location: complement(333870..334694)
location: region:333870-334694:-1
so has part: feature:333870-334694:-1:exon
subclass of: SO_0000010

61892767
type: Gene
SIO_000068: ncbigene

position:333870:-1
position: 333870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334694:-1
position: 334694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333870-334694:-1:exon

PD885_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01500
old locus tag: PD885_00291
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003477131.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
translation: MTPDPNYFIRPVVGVTSNRHLDDGVHRDWLRRRYIEALDTYAAVECVILPTIDGNLSRDATIKKVRGLVRRLDGLVLTGDESNLDPNIFDEHQRGWDQAEDDVIQNERDRPRDRLSCVALSVAIELAMPILGICRGLQEMTVHRGGVLNTDLSVAGSSLVHREPANLPRDQQYLPAHAIRIVPDGLLASIVEQDQLRVNSLHNQGVTQTVPGVQVEAVAEDGVIEAISYQTSVFQLGLQWHPEWHAANDVTSQRIFRLFGNACQVYLAAMSSPR
SIO_010081: PD885_RS01500
subclass of: SO_0000673
so part of: PD885_RS01500
location: complement(333870..334694)
location: region:333870-334694:-1
so has part: feature:333870-334694:-1:exon

WP_002808266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333870-334694:-1:exon

PD885_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01505
old locus tag: PD885_00292
so part of: sequence
location: complement(334684..335781)
location: region:334684-335781:-1
so has part: feature:334684-335781:-1:exon
subclass of: SO_0000010

61892768
type: Gene
SIO_000068: ncbigene

position:334684:-1
position: 334684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335781:-1
position: 335781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334684-335781:-1:exon

PD885_RS01505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01505
old locus tag: PD885_00292
EC number: 1.14.19.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003477129.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fatty acid desaturase family protein
translation: MINLTGNLFMETSQTWKLRNKRFATFQFSRDIMRELAGLRPDNITGALYVLKDYIVIFFCTAVTIQLDWWLYPIAVLIIGAHQRGLTTISHDAAHRILAKNKWWNNFLGTTFAAYPIFQRHWAYRVSHVHLHHPHLGDPDRDPDLKFFIKSGVYTVREPQEYKFLIVWKAIFGGATLRYLDYLWHNRFLVLEKNEKSVDKWGYIIDSYGFISFWILVIAGFVIADSLHLLVLFWLIPYLTTFQILGWFTELAEHSPMCEVQEKNVYLTRNRKGNLIERVLFGVNSDEYHLEHHLSPGVPFWMLKRAQKIRMRDPGYAEIADSWGGLFVRGSAGQPSVISQLLDRNRRLYERNMHLTEPGYIDNDA
SIO_010081: PD885_RS01505
subclass of: SO_0000673
so part of: PD885_RS01505
location: complement(334684..335781)
location: region:334684-335781:-1
so has part: feature:334684-335781:-1:exon

WP_231892688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334684-335781:-1:exon

PD885_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01510
old locus tag: PD885_00293
so part of: sequence
location: complement(335781..337103)
location: region:335781-337103:-1
so has part: feature:335781-337103:-1:exon
subclass of: SO_0000010

61892769
type: Gene
SIO_000068: ncbigene

position:337103:-1
position: 337103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335781-337103:-1:exon

PD885_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01510
old locus tag: PD885_00293
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003477128.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0019346 - transsulfuration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PLP-dependent transferase
translation: MSDIVKDSEISVETALLHAGYRHDPLTKAIAVPIYQTTAYELDGNLAKTADIYNVKKDGFTYTRIINPTTRILERRYAKVDGAADALAVASGQAATFLALINLCSGRPGDNVVVSKYLYGNTWNLFFNTFKRLGIEARSADPRELESFNRQVDDRTIAFFGEVFSNPCVIPLPVTKLAEIARSHSIPLVVDNTTTPLVCKPASLGAAISTYSATKYICGHGTTLGGLVVDNGNFAFDRSPRLPLLNNPDDAHGGIRWHDAVRELEDLGASAYLLKARMTWLRDTGAAISPLSSFQLIQGLETLHLRMQRHCENAAVVACFLQSHPKVKRVSYPGLATGRERDIVDELVDARFGYGAMIMFELDDEAAGRAFIQNVRLMYHVSNVGDARTLVTHPVSTTHTTVPKSQREDAGIFDGSIRICIGIEDVNDLVNDIKRGLDTI
SIO_010081: PD885_RS01510
subclass of: SO_0000673
so part of: PD885_RS01510
location: complement(335781..337103)
location: region:335781-337103:-1
so has part: feature:335781-337103:-1:exon

WP_002808261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335781-337103:-1:exon

PD885_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01515
old locus tag: PD885_00294
so part of: sequence
location: complement(337106..338233)
location: region:337106-338233:-1
so has part: feature:337106-338233:-1:exon
subclass of: SO_0000010

61892770
type: Gene
SIO_000068: ncbigene

position:337106:-1
position: 337106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338233:-1
position: 338233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337106-338233:-1:exon

PD885_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01515
old locus tag: PD885_00294
EC number: 2.6.1.37
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011258201.1
GO function: GO:0047304 - 2-aminoethylphosphonate-pyruvate transaminase activity [Evidence IEA]
GO process: GO:0019700 - organic phosphonate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-aminoethylphosphonate--pyruvate transaminase
translation: MTPGPLALSGEVKSQMQFDMGSREGSFKKITGLMRELTINLIEGQRSHSAIPIQGSGTYGMEAALASFVSPGDKPLVCINGIYGERILKILQIRGIHAVSMRAPSNEPLSATDIAGYLEKDKSITHVCFVHCETTTGVINPLDEIAKLTKQHGLVTIVDAISSFGAIDISAKRTPFDVLVTSSNKCIEGPPGLAFVIATIDLLKKKGHPVNSFVLDVRDQWKTLEETGEWRSTPPTHVVQASTRALELLTREGVCHRSSRYGSVRDEIIRATDRYTAPLLSAKARSPVCLALTAKGVIDTENDFNSFYMHLFNYNLCIYSKFHIQTRSFRIGCMGAIKPAWILLLSAAFRDFFDNRESCRQALTHTKSLVASGSF
SIO_010081: PD885_RS01515
subclass of: SO_0000673
so part of: PD885_RS01515
location: complement(337106..338233)
location: region:337106-338233:-1
so has part: feature:337106-338233:-1:exon

WP_231892687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337106-338233:-1:exon

PD885_RS21670
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21670
old locus tag: PD885_00295
so part of: sequence
location: complement(338414..338785)
location: region:338414-338785:-1
so has part: feature:338414-338785:-1:exon
subclass of: SO_0000010

61896501
type: Gene
SIO_000068: ncbigene

position:338414:-1
position: 338414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338785:-1
position: 338785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338414-338785:-1:exon

PD885_RS21670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21670
old locus tag: PD885_00295
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQIAFANERESMQMRSLVQEVQPVSDETVKVAFAKQSGTGQDPAQTARGEGIERHTTTLQAAKKGVDCFHEAECLSAASGGQIVSDASHATMSACQKTGRTALHRFATLMLMLGNAPALFPIS
SIO_010081: PD885_RS21670
subclass of: SO_0000673
so part of: PD885_RS21670
location: complement(338414..338785)
location: region:338414-338785:-1
so has part: feature:338414-338785:-1:exon

WP_002808258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338414-338785:-1:exon

PD885_RS21675
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21675
so part of: sequence
location: 338795..338971
location: region:338795-338971:1
so has part: feature:338795-338971:1:exon
subclass of: SO_0000010

61896502
type: Gene
SIO_000068: ncbigene

position:338795:1
position: 338795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338971:1
position: 338971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338795-338971:1:exon

PD885_RS21675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21675
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLERIDRHVRLAAFLALIAVIAMGWPTLVNGLQRVIIDDHCAGFELSLRRSKLQGSHL
SIO_010081: PD885_RS21675
subclass of: SO_0000673
so part of: PD885_RS21675
location: 338795..338971
location: region:338795-338971:1
so has part: feature:338795-338971:1:exon

WP_197493701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338795-338971:1:exon

PD885_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01525
old locus tag: PD885_00296
pseudo: true
so part of: sequence
location: complement(339551..340431)
location: region:339551-340431:-1
so has part: feature:339551-340431:-1:exon
subclass of: SO_0000010

61892771
type: Gene
SIO_000068: ncbigene

position:339551:-1
position: 339551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340431:-1
position: 340431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339551-340431:-1:exon

PD885_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01525
old locus tag: PD885_00296
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011112884.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS481 family transposase
SIO_010081: PD885_RS01525
subclass of: SO_0000673
so part of: PD885_RS01525
location: complement(339551..340431)
location: region:339551-340431:-1
so has part: feature:339551-340431:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:339551-340431:-1:exon

PD885_RS01530
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01530
so part of: sequence
location: 340617..340692
location: region:340617-340692:1
so has part: feature:340617-340692:1:exon
subclass of: SO_0000011

61892772
type: Gene
SIO_000068: ncbigene

position:340617:1
position: 340617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340692:1
position: 340692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340617-340692:1:exon

PD885_RS01530
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 48664
nc RNA class: other
locus tag: PD885_RS01530
product: sX9 sRNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02228
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: PD885_RS01530
subclass of: SO_0000673
so part of: PD885_RS01530
location: 340617..340692
location: region:340617-340692:1
so has part: feature:340617-340692:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340617-340692:1:exon

PD885_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01535
old locus tag: PD885_00297
so part of: sequence
location: 340727..341308
location: region:340727-341308:1
so has part: feature:340727-341308:1:exon
subclass of: SO_0000010

61892773
type: Gene
SIO_000068: ncbigene

position:340727:1
position: 340727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341308:1
position: 341308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340727-341308:1:exon

PD885_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01535
old locus tag: PD885_00297
EC number: 4.1.3.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409581.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminodeoxychorismate/anthranilate synthase component II
translation: MNVLMLDNYDSFTYNLVQYLQALGAEVTVVRNDAMSVDQIAALKPERIVISPGPCTPNEAGISLQLIEQLGQTTPILGVCLGHQSIGQVYGGDVIRADNIMHGKTSPIRHQGKGVFAGLPDSYEATRYHSLVVDKTTLPDVLEVTAWTENPDGSIEEIMGLRHRQFPVEGVQFHPESILTQHGHALLKNFLQR
SIO_010081: PD885_RS01535
subclass of: SO_0000673
so part of: PD885_RS01535
location: 340727..341308
location: region:340727-341308:1
so has part: feature:340727-341308:1:exon

WP_002802968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340727-341308:1:exon

PD885_RS01540
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01540
old locus tag: PD885_00298
pseudo: true
so part of: sequence
location: 341487..342118
location: region:341487-342118:1
so has part: feature:341487-342118:1:exon
subclass of: SO_0000010

61892774
type: Gene
SIO_000068: ncbigene

position:341487:1
position: 341487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342118:1
position: 342118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341487-342118:1:exon

PD885_RS01540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01540
old locus tag: PD885_00298
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017158907.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: flavin reductase family protein
SIO_010081: PD885_RS01540
subclass of: SO_0000673
so part of: PD885_RS01540
location: 341487..342118
location: region:341487-342118:1
so has part: feature:341487-342118:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:341487-342118:1:exon

PD885_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: trpD
locus tag: PD885_RS01545
old locus tag: PD885_00299
so part of: sequence
location: 342246..343283
location: region:342246-343283:1
so has part: feature:342246-343283:1:exon
subclass of: SO_0000010

61892775
type: Gene
SIO_000068: ncbigene

position:342246:1
position: 342246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343283:1
position: 343283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342246-343283:1:exon

PD885_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: trpD
locus tag: PD885_RS01545
old locus tag: PD885_00299
EC number: 2.4.2.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014089193.1
GO function: GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anthranilate phosphoribosyltransferase
translation: MTITPQEALQRVIEHREIFHDEMVELMRQIMRGEVSDMMVAAILTGLRVKKETIGEIAGAAKVMREFSRRVDVTDRQHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVAASLAQTGIGFMYAPVHHPAMKVVAPVRREMGVRTIFNILGPLTNPAGSPNILMGVFHPDLVGIQARVLQQLGAERALVVWGRDGMDELSLGAGTLVGELRDGKVHEYEVHPEDFGIAMSASRNLKVADAAQSRTMLLQVLDNVPGPALDIVALNAGAALYVAGVADSIANGVARARVVLADGSARAKVDAYVALTRQVAMQS
SIO_010081: PD885_RS01545
subclass of: SO_0000673
so part of: PD885_RS01545
location: 342246..343283
location: region:342246-343283:1
so has part: feature:342246-343283:1:exon

WP_040762674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342246-343283:1:exon

PD885_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: trpC
locus tag: PD885_RS01550
old locus tag: PD885_00300
so part of: sequence
location: 343424..344221
location: region:343424-344221:1
so has part: feature:343424-344221:1:exon
subclass of: SO_0000010

61892776
type: Gene
SIO_000068: ncbigene

position:343424:1
position: 343424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344221:1
position: 344221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343424-344221:1:exon

PD885_RS01550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: trpC
locus tag: PD885_RS01550
old locus tag: PD885_00300
EC number: 4.1.1.48
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019303763.1
GO function: GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO process: GO:0006568 - tryptophan metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: indole-3-glycerol phosphate synthase TrpC
translation: MSDILNTILARKADEVAERKARVPLAELIARSADLPQTRGFAAAMQASIAAGDPAVIAEVKKASPSKGVIRPNFHPADIAVSYEFGGATCLSVLTDVDFFQGADDYLRQAREACTLPVLRKDFTVDPYQVYEASVLGADCVLLIVSALEDAQLADLSGLAMQLGLDVLVEVHDIDELERAVQVPAPLIGINNRNLRTFEVSLQTTLDMRAAVPRDRILVTESGIVTPDDVQLMRGHGVNAFLVGETFMRAPEPGESLRQLFFAHD
SIO_010081: PD885_RS01550
subclass of: SO_0000673
so part of: PD885_RS01550
location: 343424..344221
location: region:343424-344221:1
so has part: feature:343424-344221:1:exon

WP_002808251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343424-344221:1:exon

PD885_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01555
old locus tag: PD885_00301
so part of: sequence
location: 344214..344930
location: region:344214-344930:1
so has part: feature:344214-344930:1:exon
subclass of: SO_0000010

61892777
type: Gene
SIO_000068: ncbigene

position:344214:1
position: 344214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344930:1
position: 344930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344214-344930:1:exon

PD885_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01555
old locus tag: PD885_00301
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002808250.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: haloacid dehalogenase-like hydrolase
translation: MTESYPAPRKDAPLVVFDFDHTLYDGDSGSHLFAWLIKRNPLRLLVALLASPILGPMVAILPTRRRGVSGYVWIATFGLHRAREFNRFIDAYVLKHEAQIRQRLLPHALKVFTEHRAAGDRVVVATGAPPELARAILGFVAHQDVPVIGSLVGPRLGAVTARRHCHNEEKMRMLRERGYADIAIAYSDSTADLPLLKAARAPVVVNPKANREDLFRQVLPAGTPILNWGCRDRGGKAL
SIO_010081: PD885_RS01555
subclass of: SO_0000673
so part of: PD885_RS01555
location: 344214..344930
location: region:344214-344930:1
so has part: feature:344214-344930:1:exon

WP_002808250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344214-344930:1:exon

PD885_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: crp
locus tag: PD885_RS01560
old locus tag: PD885_00302
so part of: sequence
location: complement(345398..346090)
location: region:345398-346090:-1
so has part: feature:345398-346090:-1:exon
subclass of: SO_0000010

61892778
type: Gene
SIO_000068: ncbigene

position:345398:-1
position: 345398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346090:-1
position: 346090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345398-346090:-1:exon

PD885_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: crp
locus tag: PD885_RS01560
old locus tag: PD885_00302
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010368067.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cAMP-activated global transcriptional regulator CRP
translation: MSPGNTTVVTTTVRNATPSLALDAGTIERFLAHSHRRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEMGLFIESDTREVILRTRTQCELAEISYERLQQLFQTSLSPDAPRILYAIGVQLSKRLLDTTRKASRLAFLDVTDRIVRTLHDLSKEPEAMSHPQGTQLRVSRQELARLVGCSREMAGRVLKKLQVDGLLHARGKTVVLYGTR
SIO_010081: PD885_RS01560
subclass of: SO_0000673
so part of: PD885_RS01560
location: complement(345398..346090)
location: region:345398-346090:-1
so has part: feature:345398-346090:-1:exon

WP_002808249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345398-346090:-1:exon

PD885_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: speD
locus tag: PD885_RS01565
old locus tag: PD885_00303
so part of: sequence
location: 346231..347025
location: region:346231-347025:1
so has part: feature:346231-347025:1:exon
subclass of: SO_0000010

61892779
type: Gene
SIO_000068: ncbigene

position:346231:1
position: 346231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347025:1
position: 347025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346231-347025:1:exon

PD885_RS01565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: speD
locus tag: PD885_RS01565
old locus tag: PD885_00303
EC number: 4.1.1.50
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005411315.1
GO function: GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
GO process: GO:0008295 - spermidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenosylmethionine decarboxylase
translation: MVKPLPRLRLQGFNNLTKALSFNIYDVCYARTEEERQRYIEYIDEQYDADRLTQILTDVAEIIGANILNIARQDYDPQGASVTILISEEPVIDKKQAGKELISDAVVAHMDKSHITVHTYPETHPQEGIATFRADIDVATCGVISPLKALNYLIESLESDIVIMDYRVRGFTRDVKGKKHYIDHKINSIQHFLAKNVKSRYEMFDVNVYQENIFHTKMHLKDFDLDQYLFEERAKNLSFKERMKIETLLKREIEELFHGRNLSE
SIO_010081: PD885_RS01565
subclass of: SO_0000673
so part of: PD885_RS01565
location: 346231..347025
location: region:346231-347025:1
so has part: feature:346231-347025:1:exon

WP_005990692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346231-347025:1:exon

PD885_RS21850
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21850
old locus tag: PD885_00304
pseudo: true
so part of: sequence
location: <347180..347308
location: region:347180-347308:1
so has part: feature:347180-347308:1:exon
subclass of: SO_0000010

61892780
type: Gene
SIO_000068: ncbigene

position:347180:1
position: 347180
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:347308:1
position: 347308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347180-347308:1:exon

PD885_RS21850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21850
old locus tag: PD885_00304
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005990694.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: QacE family quaternary ammonium compound efflux SMR transporter
SIO_010081: PD885_RS21850
subclass of: SO_0000673
so part of: PD885_RS21850
location: <347180..347308
location: region:347180-347308:1
so has part: feature:347180-347308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:347180-347308:1:exon

PD885_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: coq7
locus tag: PD885_RS01575
old locus tag: PD885_00305
so part of: sequence
location: complement(347476..348129)
location: region:347476-348129:-1
so has part: feature:347476-348129:-1:exon
subclass of: SO_0000010

61892781
type: Gene
SIO_000068: ncbigene

position:347476:-1
position: 347476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348129:-1
position: 348129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347476-348129:-1:exon

PD885_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: coq7
locus tag: PD885_RS01575
old locus tag: PD885_00305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003483072.1
GO function: GO:0004497 - monooxygenase activity [Evidence IEA]
GO process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase
translation: MAQTTPSRLHSRLDRLLVEAQRALDTVFGNPPAERPNPATNTPDVVLKPDQRRHAAGLMRINHVGEVCAQGLYFGQAAVARDAHTQHHLLEAAQEETDHLAWCADRLHELDSRPSLFNPLWYAGSYALGALAGLRGDHWSLGFVVETERQVEAHLDEHLETLPEIDQRSRAILRVMKIDEARHADQAEQAGARILPPPIPSAMALASKLMMTIAYRL
SIO_010081: PD885_RS01575
subclass of: SO_0000673
so part of: PD885_RS01575
location: complement(347476..348129)
location: region:347476-348129:-1
so has part: feature:347476-348129:-1:exon

WP_002808246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347476-348129:-1:exon

PD885_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: rplM
locus tag: PD885_RS01580
old locus tag: PD885_00306
so part of: sequence
location: 348310..348738
location: region:348310-348738:1
so has part: feature:348310-348738:1:exon
subclass of: SO_0000010

61892782
type: Gene
SIO_000068: ncbigene

position:348310:1
position: 348310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348738:1
position: 348738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348310-348738:1:exon

PD885_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: rplM
locus tag: PD885_RS01580
old locus tag: PD885_00306
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006451009.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L13
translation: MTTFTAKSETVQRDWYLVDAAGKTLGRLSTELARRLRGKHKPVYTTHVDTGDYLVVINAEKIVVTGNKLKDKKYHRFTGYIGNLKTESLEQALQRHPERVIEIAVKGMLPKGPLGRTMYRKLKVYSGAEHPHAAQQPQVLDI
SIO_010081: PD885_RS01580
subclass of: SO_0000673
so part of: PD885_RS01580
location: 348310..348738
location: region:348310-348738:1
so has part: feature:348310-348738:1:exon

WP_002808239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348310-348738:1:exon

PD885_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: rpsI
locus tag: PD885_RS01585
old locus tag: PD885_00307
so part of: sequence
location: 348742..349134
location: region:348742-349134:1
so has part: feature:348742-349134:1:exon
subclass of: SO_0000010

61892783
type: Gene
SIO_000068: ncbigene

position:348742:1
position: 348742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349134:1
position: 349134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348742-349134:1:exon

PD885_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: rpsI
locus tag: PD885_RS01585
old locus tag: PD885_00307
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S9
translation: MAITQNYGTGRRKSSTARVFLRKGNGNITVNDRPLDEFFGRETARMIVRQPLELTKNTESFDILVTASGGGTTGQAGAIRLGIARALVEYDETLKSELRKAGFMTRDAREVERKKVGLHKARRATQFSKR
SIO_010081: PD885_RS01585
subclass of: SO_0000673
so part of: PD885_RS01585
location: 348742..349134
location: region:348742-349134:1
so has part: feature:348742-349134:1:exon

WP_002808236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348742-349134:1:exon

PD885_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01590
old locus tag: PD885_00308
so part of: sequence
location: complement(349574..349647)
location: region:349574-349647:-1
so has part: feature:349574-349647:-1:exon
subclass of: SO_0000663

61892784
type: Gene
SIO_000068: ncbigene

position:349574:-1
position: 349574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349647:-1
position: 349647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349574-349647:-1:exon

PD885_RS01590
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 48664
locus tag: PD885_RS01590
old locus tag: PD885_00308
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(349613..349615),aa:Gln,seq:ctg)
SIO_010081: PD885_RS01590
subclass of: SO_0000673
so part of: PD885_RS01590
location: complement(349574..349647)
location: region:349574-349647:-1
so has part: feature:349574-349647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349574-349647:-1:exon

PD885_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01595
old locus tag: PD885_00309
so part of: sequence
location: complement(349700..349776)
location: region:349700-349776:-1
so has part: feature:349700-349776:-1:exon
subclass of: SO_0000663

61892785
type: Gene
SIO_000068: ncbigene

position:349700:-1
position: 349700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349776:-1
position: 349776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349700-349776:-1:exon

PD885_RS01595
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 48664
locus tag: PD885_RS01595
old locus tag: PD885_00309
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(349740..349742),aa:Met,seq:cat)
SIO_010081: PD885_RS01595
subclass of: SO_0000673
so part of: PD885_RS01595
location: complement(349700..349776)
location: region:349700-349776:-1
so has part: feature:349700-349776:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349700-349776:-1:exon

PD885_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01600
old locus tag: PD885_00310
so part of: sequence
location: 349895..350512
location: region:349895-350512:1
so has part: feature:349895-350512:1:exon
subclass of: SO_0000010

61892786
type: Gene
SIO_000068: ncbigene

position:349895:1
position: 349895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350512:1
position: 350512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349895-350512:1:exon

PD885_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01600
old locus tag: PD885_00310
EC number: 3.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017167453.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA pyrophosphohydrolase
translation: MIDPDGFRPNVGIVLMRQDGQVFWARRVRRDGWQFPQGGMNTDETPVEAMYRELREETGLLPEHVELLGATPGWLRYRLPSRAVRRNERQVCIGQKQVWFLLRFTGEESHLKLDHTDTPEFDHWRWVDFWYPVEHVVMFKRGVYARALRHLAPLAQNLAGPGAVGAMPERALEAWLPGSSAAGHDSPRKRPLKRSGVRPVRINND
SIO_010081: PD885_RS01600
subclass of: SO_0000673
so part of: PD885_RS01600
location: 349895..350512
location: region:349895-350512:1
so has part: feature:349895-350512:1:exon

WP_002808235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349895-350512:1:exon

PD885_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01605
so part of: sequence
location: 350593..350802
location: region:350593-350802:1
so has part: feature:350593-350802:1:exon
subclass of: SO_0000010

61892787
type: Gene
SIO_000068: ncbigene

position:350593:1
position: 350593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350802:1
position: 350802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350593-350802:1:exon

PD885_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003483089.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: (2Fe-2S)-binding protein
translation: MYVCICNGVTDHQIREAAENGCASLAELTVRTGCGSNCGSCLEMAGDLLSQVHATRALPLPLLGLASAA
SIO_010081: PD885_RS01605
subclass of: SO_0000673
so part of: PD885_RS01605
location: 350593..350802
location: region:350593-350802:1
so has part: feature:350593-350802:1:exon

WP_002808233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350593-350802:1:exon

PD885_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: bfr
locus tag: PD885_RS01610
old locus tag: PD885_00311
so part of: sequence
location: 351229..351699
location: region:351229-351699:1
so has part: feature:351229-351699:1:exon
subclass of: SO_0000010

61892788
type: Gene
SIO_000068: ncbigene

position:351229:1
position: 351229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351699:1
position: 351699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351229-351699:1:exon

PD885_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: bfr
locus tag: PD885_RS01610
old locus tag: PD885_00311
EC number: 1.16.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002808230.1
GO function: GO:0008199 - ferric iron binding [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA]
GO process: GO:0006880 - intracellular sequestering of iron ion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bacterioferritin
translation: MKGDTKVIEHLNKVLYNELTAINQYFLHAKMLKNWGLKELAEHEYKESIDEMKHADKLSDRILFLEGLPNFQVLGKLRIGESPTEMFRCDLTLEREAVAVLREAVAYAESVKDYVSRQLLVDILESEEEHIDWLETQLDLVARIGEPNYLLTKLDD
SIO_010081: PD885_RS01610
subclass of: SO_0000673
so part of: PD885_RS01610
location: 351229..351699
location: region:351229-351699:1
so has part: feature:351229-351699:1:exon

WP_002808230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351229-351699:1:exon

PD885_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01615
old locus tag: PD885_00312
so part of: sequence
location: complement(352070..354376)
location: region:352070-354376:-1
so has part: feature:352070-354376:-1:exon
subclass of: SO_0000010

61892789
type: Gene
SIO_000068: ncbigene

position:352070:-1
position: 352070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354376:-1
position: 354376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352070-354376:-1:exon

PD885_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01615
old locus tag: PD885_00312
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002808227.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MTARAGGLRAWSTLATLAALVAALGAGLQWSALQGPWLAVTAVSATLAMVFGLCAAIAANRALRTQQALSQRLEEADLSRERLQQELQRHGELEQELLRAKQAAEAATLAKGEFLATMSHEIRTPLNGIVPMLELISSGQLSVDQREMLQTATGSSLQLLRIVDDILDYSKLEANKLELETTTFNLRELLDGVVQLLQRTAEGRQLRLSLDIEPSVRLLVRGDPIRLRQVLGNLIGNAIKFTERGSVDILLRRLGETRAQHLLRFQVRDTGIGIAPDQQARLFRSFAQADASTTRLYGGTGLGLAICKRIVDLMGGRIGVESEPGRGATFWFEIPLLKVIGDLQQNTGTDAARVMVISSDARLSQRLKRLLDSWGVSHVLMETTQEALERVRRHSDTEGFRCVIADHDKLRYSARAVHRALARPEDLRGSRLIWLYGEEPVPAELQDNATLVPRQSPDETLRALVLPPDPKPAHAAALDSEAIPDPLPPPMANPRDVRILLAEDNPVNLLVAQKLLAFLGFEADTATDGEAALSSMESTRYDMVFMDCQMPVLDGYAATRRWRAMETESGRGPVPIVAMTANAMAGDRERCLAAGMDDYLSKPVAREQLDACLQRWLPRQQALPELASCGPAAMNPESASAAAQARVLPILDNSVIDELYEVAGADTFTILQLFLEDAPLIIERLEVAAANRDSIQLRDLAHTLTSSSANVGAQAVSNAARRIELAARTGTIERPSVMVALVVAEYARARLALLDKIARLQSATRAAS
SIO_010081: PD885_RS01615
subclass of: SO_0000673
so part of: PD885_RS01615
location: complement(352070..354376)
location: region:352070-354376:-1
so has part: feature:352070-354376:-1:exon

WP_088056614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352070-354376:-1:exon

PD885_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01620
old locus tag: PD885_00313
so part of: sequence
location: complement(354377..356326)
location: region:354377-356326:-1
so has part: feature:354377-356326:-1:exon
subclass of: SO_0000010

61892790
type: Gene
SIO_000068: ncbigene

position:354377:-1
position: 354377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356326:-1
position: 356326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354377-356326:-1:exon

PD885_RS01620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01620
old locus tag: PD885_00313
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015462808.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing response regulator
translation: MAARDPVSFTTRDNTATRNRPLRAETPPADHWRRWADEAAAADSVAPVSAAIIPASAVAVAAVSGPAAQIASPRAVANISSARTAPASVALAVARDGNVPADAPYRVLIVEDDRSQALFAQSVLHGAGMHAQIEMTAVNVPHAIQDYHPDLILMDLHMPELDGIRLTTLIRQQPSQQLLPIVFLTGDPDPERQFEVLDSGADDFLTKPVRPRHLIAAVSNRIRRARKQALQQAGQQISVRSNPETGLPTRGHVMELLADALERKQSGGLFFIEIASALGLRERYGYADYERLMTQAGHRLASAAHPYPLARLNDNSFLLLAVGMPEAGLEQHALEIRQRLSANAFPVREDESVHVRCAIGVAPLGFGFDDTGSALEAVERTALQARLRSDGVQAYLAPSQAEQQEQLRLVEGQLELAYQPIVAVAGGDTAQYQVLLRLRQADGTLLSAGQVIPAAEAAGRIADLDQQVMDHAVGLLHLYQHASPPLRLFVSQSPRTLARDAFADWLLKELVERGVAGQSLIVDLRLDDALIHTVTVQQFCAKLMPAGVQFCLSQFEPGDEANALLSQLPLSFVRMANRFADSHGNTAVRDQLRSVIDIAHQRGLLIIGQRIEDPQAAAAMWISGVDFIQGNLVQTVGKELDFDFTNAVL
SIO_010081: PD885_RS01620
subclass of: SO_0000673
so part of: PD885_RS01620
location: complement(354377..356326)
location: region:354377-356326:-1
so has part: feature:354377-356326:-1:exon

WP_002808225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354377-356326:-1:exon

PD885_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01625
old locus tag: PD885_00314
so part of: sequence
location: complement(356366..356992)
location: region:356366-356992:-1
so has part: feature:356366-356992:-1:exon
subclass of: SO_0000010

61892791
type: Gene
SIO_000068: ncbigene

position:356366:-1
position: 356366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356992:-1
position: 356992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356366-356992:-1:exon

PD885_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01625
old locus tag: PD885_00314
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002808223.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4126 domain-containing protein
translation: MSEAHLFVIGILLAWLAGIRVYLTVFGVGLAGLLGWIELPPALHPAQSWWVLGTSGALAVAEFFADKIPGVDSGWDLVQTLARVPAGAFLAAATLSPDGNLGTGALAAGAGLALTSHTLKAGTRALLNTSPEPASNWIASLAEDTIATTALALALAHPWLALSLAVGSSVLAALVVWWVWRLLWRGVHRLVAPTRAATTPATRRSPLS
SIO_010081: PD885_RS01625
subclass of: SO_0000673
so part of: PD885_RS01625
location: complement(356366..356992)
location: region:356366-356992:-1
so has part: feature:356366-356992:-1:exon

WP_002808223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356366-356992:-1:exon

PD885_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01630
old locus tag: PD885_00315
so part of: sequence
location: 357089..357880
location: region:357089-357880:1
so has part: feature:357089-357880:1:exon
subclass of: SO_0000010

61892792
type: Gene
SIO_000068: ncbigene

position:357089:1
position: 357089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357880:1
position: 357880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357089-357880:1:exon

PD885_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01630
old locus tag: PD885_00315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008574003.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAPARPDPMPMRPAARIQIVRRESGGGRSSRRWVWVGVIAILWLASLGGAWWMATRTAAPRLVEAESALQQAQRRQARQRRQIEQLQQRQVNLAMSDKISRAANTEVQASLAERDEQIAALRADVAFYERLVGSTAQRKGLNAHSVQFTAEAGGTWNYSVVLTQNLNRGAISQGQLRFAVEGVRAGKLVTVSWNELHQKPDAAGQPYSFRYFQQLDGSVILPKDFTPQRVKISLSGDGAPVNQTFDWNIAGIGAGGVAHVRK
SIO_010081: PD885_RS01630
subclass of: SO_0000673
so part of: PD885_RS01630
location: 357089..357880
location: region:357089-357880:1
so has part: feature:357089-357880:1:exon

WP_002808222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357089-357880:1:exon

PD885_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01635
old locus tag: PD885_00316
so part of: sequence
location: 357867..358316
location: region:357867-358316:1
so has part: feature:357867-358316:1:exon
subclass of: SO_0000010

61892793
type: Gene
SIO_000068: ncbigene

position:357867:1
position: 357867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358316:1
position: 358316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357867-358316:1:exon

PD885_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01635
old locus tag: PD885_00316
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003483106.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polymer-forming cytoskeletal protein
translation: MFGNKSNRGAQTMVDTLIGPQVVICGDLMFSGGLYVEGRILGKVIAEDGASATLTVAEQGSIEGEVRAPVVIINGQLTGDVHAAERVELAANARVQGNVHYQVVEMSAGAQLTGHLIHAAIADATAALPAPDASGAEPVKALQAKIADA
SIO_010081: PD885_RS01635
subclass of: SO_0000673
so part of: PD885_RS01635
location: 357867..358316
location: region:357867-358316:1
so has part: feature:357867-358316:1:exon

WP_002808220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357867-358316:1:exon

PD885_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: erpA
locus tag: PD885_RS01640
old locus tag: PD885_00317
so part of: sequence
location: 358398..358784
location: region:358398-358784:1
so has part: feature:358398-358784:1:exon
subclass of: SO_0000010

61892794
type: Gene
SIO_000068: ncbigene

position:358398:1
position: 358398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358784:1
position: 358784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358398-358784:1:exon

PD885_RS01640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: erpA
locus tag: PD885_RS01640
old locus tag: PD885_00317
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005411302.1
GO function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-sulfur cluster insertion protein ErpA
translation: MSTLVSLPTAAPAPDYQSIDRPLNFSVAAAAKVRELIQEEGNADLALRVYIQGGGCSGFQYGFEFDENRAEDDLAVATDGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNAKTTCGCGSSFSV
SIO_010081: PD885_RS01640
subclass of: SO_0000673
so part of: PD885_RS01640
location: 358398..358784
location: region:358398-358784:1
so has part: feature:358398-358784:1:exon

WP_002808218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358398-358784:1:exon

PD885_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01645
old locus tag: PD885_00318
pseudo: true
so part of: sequence
location: <358826..359106
location: region:358826-359106:1
so has part: feature:358826-359106:1:exon
subclass of: SO_0000010

61892795
type: Gene
SIO_000068: ncbigene

position:358826:1
position: 358826
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:359106:1
position: 359106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358826-359106:1:exon

PD885_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01645
old locus tag: PD885_00318
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017158909.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: alpha/beta hydrolase
SIO_010081: PD885_RS01645
subclass of: SO_0000673
so part of: PD885_RS01645
location: <358826..359106
location: region:358826-359106:1
so has part: feature:358826-359106:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:358826-359106:1:exon

PD885_RS21680
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21680
pseudo: true
so part of: sequence
location: 359546..>360549
location: region:359546-360549:1
so has part: feature:359546-360549:1:exon
subclass of: SO_0000010

61896503
type: Gene
SIO_000068: ncbigene

position:359546:1
position: 359546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360549:1
position: 360549
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359546-360549:1:exon

PD885_RS21680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172846.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase
SIO_010081: PD885_RS21680
subclass of: SO_0000673
so part of: PD885_RS21680
location: 359546..>360549
location: region:359546-360549:1
so has part: feature:359546-360549:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:359546-360549:1:exon

PD885_RS20295
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS20295
old locus tag: PD885_00320
so part of: sequence
location: 360523..361458
location: region:360523-361458:1
so has part: feature:360523-361458:1:exon
subclass of: SO_0000010

61896314
type: Gene
SIO_000068: ncbigene

position:360523:1
position: 360523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361458:1
position: 361458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360523-361458:1:exon

PD885_RS20295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS20295
old locus tag: PD885_00320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MSSKRYTDEFKIEAVRQVTNRGFKYAFMQAHCGEFRVCAMCRVLRVNRSGHYAWLCSPNSERAKEDERLLGLIKHHWLASGSVYGHRKITRDLRDLDERCSRHRVHRLMRTEGLRAQVGYGRKPRLHGGMQCKAAANLLDRQFDVTEPDTAWASDFTFIRTHEGWMYLAVVIDLFSRQVVGWAMRDRADTELVVQALLSAVWRRKPNAGCLVHSDQGSVYTSDDWRSFLASHGVVCSMSRRGNCHDNAPVESFFGLLKRERIRRRTYSTKDAARAEVFDYIEMFYNPNRRHGSTGDLSPVEFERRYAQRGS
SIO_010081: PD885_RS20295
subclass of: SO_0000673
so part of: PD885_RS20295
location: 360523..361458
location: region:360523-361458:1
so has part: feature:360523-361458:1:exon

WP_145954116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360523-361458:1:exon

PD885_RS01655
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01655
pseudo: true
so part of: sequence
location: <361481..361660
location: region:361481-361660:1
so has part: feature:361481-361660:1:exon
subclass of: SO_0000010

61892796
type: Gene
SIO_000068: ncbigene

position:361481:1
position: 361481
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:361660:1
position: 361660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361481-361660:1:exon

PD885_RS01655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014089012.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Fic family protein
SIO_010081: PD885_RS01655
subclass of: SO_0000673
so part of: PD885_RS01655
location: <361481..361660
location: region:361481-361660:1
so has part: feature:361481-361660:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361481-361660:1:exon

PD885_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01660
old locus tag: PD885_00321
so part of: sequence
location: 361809..362726
location: region:361809-362726:1
so has part: feature:361809-362726:1:exon
subclass of: SO_0000010

61892797
type: Gene
SIO_000068: ncbigene

position:361809:1
position: 361809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362726:1
position: 362726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361809-362726:1:exon

PD885_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01660
old locus tag: PD885_00321
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016849672.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta fold hydrolase
translation: MTYPGYPFTPKRLEVRPGVAMSYLDEGPPDGEVAAAEVIVMLHGNPSWSYLWRHLVGGLSDRYRCIVPDHIGMGLSDKPDDVPDAQPRYEYTLQSRVDDLDTLLRHLGVSGPITLAVHDWGGMIGFGWALSHHAQVKRLVITNTAAFPLPLEKPMPWQIAMGRHWRPGEWFIRTFNAFSAGASWLGVSRRMPADVRRAYVAPYNNWRNRISTIRFMQDIPLSPADKAWSLLERSAQALPSFADRPAFIAWGLGDICFDKHFLAGFRKALPNAEVTAFDDANHYVLEDKHEVLVPAIRAFLERHPL
SIO_010081: PD885_RS01660
subclass of: SO_0000673
so part of: PD885_RS01660
location: 361809..362726
location: region:361809-362726:1
so has part: feature:361809-362726:1:exon

WP_002808210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361809-362726:1:exon

PD885_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01665
old locus tag: PD885_00322
so part of: sequence
location: complement(362752..363135)
location: region:362752-363135:-1
so has part: feature:362752-363135:-1:exon
subclass of: SO_0000010

61892798
type: Gene
SIO_000068: ncbigene

position:362752:-1
position: 362752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363135:-1
position: 363135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362752-363135:-1:exon

PD885_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01665
old locus tag: PD885_00322
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016849671.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YkgJ family cysteine cluster protein
translation: MAHPCLTCGACCAYFRVSFHWSEADPALGGRVPIALTDALRTHERIMRGTSQSQPRCIALDADIGRYSRCSIYDRRPSSCAAVPASLEFGQRSAQCDKSRLAHGLHTLTEADWLGVDEARHNPLPAL
SIO_010081: PD885_RS01665
subclass of: SO_0000673
so part of: PD885_RS01665
location: complement(362752..363135)
location: region:362752-363135:-1
so has part: feature:362752-363135:-1:exon

WP_002808209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362752-363135:-1:exon

PD885_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01670
old locus tag: PD885_00323
so part of: sequence
location: 363449..365101
location: region:363449-365101:1
so has part: feature:363449-365101:1:exon
subclass of: SO_0000010

61892799
type: Gene
SIO_000068: ncbigene

position:363449:1
position: 363449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365101:1
position: 365101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363449-365101:1:exon

PD885_RS01670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01670
old locus tag: PD885_00323
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035474.1
GO function: GO:0031956 - medium-chain fatty acid-CoA ligase activity [Evidence IEA]
GO process: GO:0006631 - fatty acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fatty acid CoA ligase family protein
translation: MTTLCNIAATLPQLARERPDQIAIRCPGRRAANGFAAYDVTLSYAELDARSNAIAAGLAAHGIGRGARAVVMVRPSPEFFLLMFALFKAGAVPVLVDPGIDRRALKQCLDEAQPQAFIGIPLAQLARRLLRWARSARQIVTVGGHYGWGGVTLARMERDGAGAGSQLADTAPDDMAAMLFTSGSTGVPKGVVYRHRHFAGQIELLRNAFDMQPGGVDLPTFPPFALFDPALGLTSVIPDMDPTRPATADPRKLHDAIDRFGVTQLFGSPALMRVLADYGQPLPNVRLATSAGAPVPPDVVARIRALLPADAQFWTPYGATECLPVAAIEGRTLDATRAATESGAGTCVGQVVPPNEVRIIAIDDAPIADWSGTRVLAVGEVGEITVAGPTTTDTYFNRDAATRIAKIRERSADGSERIVHRMGDVGYFDADGRLWFCGRKTHRVETATGPLYTEQVEPVFNMHPQVRRTALVGVGAPGQQQPVLCVELQPGVSASVFAEVETALRALGAAHPHTAGIRRFLRHTGFPVDIRHNAKIGRETLAVWAAQQRD
SIO_010081: PD885_RS01670
subclass of: SO_0000673
so part of: PD885_RS01670
location: 363449..365101
location: region:363449-365101:1
so has part: feature:363449-365101:1:exon

WP_002808208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363449-365101:1:exon

PD885_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01675
old locus tag: PD885_00324
so part of: sequence
location: 365192..366202
location: region:365192-366202:1
so has part: feature:365192-366202:1:exon
subclass of: SO_0000010

61892800
type: Gene
SIO_000068: ncbigene

position:365192:1
position: 365192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366202:1
position: 366202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365192-366202:1:exon

PD885_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01675
old locus tag: PD885_00324
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005912231.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent epimerase/dehydratase family protein
translation: MRILVTGGGGFLGQALCRGLRARGHAVVSFQRGDYPILLSLGVAQIRGDLADPQAVRHAFAGVDAVFHNAAKAGAWGSYNSYHQANVVGTHNVLDACRANGVQRLIYTSTPSVTHRATHPVEGLGADEVPYGQDLRAAYAATKAIAERAVLAANDAQLATVALRPRLIWGPGDNHLLPRLAARARAGRLRMVGDGSNLVDSTYIDNAAQAHFDAFEHLAPGAACAGKAYFISNGEPLPMRELLNRLLAAVDTPAVTRSLSFKTAYRIGAVCETLWPLLRLPGEVPLTRFLVEQLCTPHWYSMEPARRDFGYVPQISIEEGLQRLRSSSSNDIAITR
SIO_010081: PD885_RS01675
subclass of: SO_0000673
so part of: PD885_RS01675
location: 365192..366202
location: region:365192-366202:1
so has part: feature:365192-366202:1:exon

WP_002808207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365192-366202:1:exon

PD885_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01680
old locus tag: PD885_00325
so part of: sequence
location: 366268..366426
location: region:366268-366426:1
so has part: feature:366268-366426:1:exon
subclass of: SO_0000010

61892801
type: Gene
SIO_000068: ncbigene

position:366268:1
position: 366268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366426:1
position: 366426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366268-366426:1:exon

PD885_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01680
old locus tag: PD885_00325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011260548.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1328 domain-containing protein
translation: MLHYAIIFFVIAIIAAVLGFSGIAGAATNIAWILFVVFLILAVISMFRRGKA
SIO_010081: PD885_RS01680
subclass of: SO_0000673
so part of: PD885_RS01680
location: 366268..366426
location: region:366268-366426:1
so has part: feature:366268-366426:1:exon

WP_002808206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366268-366426:1:exon

PD885_RS20300
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS20300
pseudo: true
so part of: sequence
location: complement(<366633..>367049)
location: region:366633-367049:-1
so has part: feature:366633-367049:-1:exon
subclass of: SO_0000010

61896315
type: Gene
SIO_000068: ncbigene

position:366633:-1
position: 366633
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:367049:-1
position: 367049
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366633-367049:-1:exon

PD885_RS20300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS20300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010379859.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-grasp domain-containing protein
SIO_010081: PD885_RS20300
subclass of: SO_0000673
so part of: PD885_RS20300
location: complement(<366633..>367049)
location: region:366633-367049:-1
so has part: feature:366633-367049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366633-367049:-1:exon

PD885_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01690
old locus tag: PD885_00328
so part of: sequence
location: 367091..367735
location: region:367091-367735:1
so has part: feature:367091-367735:1:exon
subclass of: SO_0000010

61892802
type: Gene
SIO_000068: ncbigene

position:367091:1
position: 367091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367735:1
position: 367735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367091-367735:1:exon

PD885_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01690
old locus tag: PD885_00328
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035478.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SCP2 sterol-binding domain-containing protein
translation: MPGSLFNSLKPLAGQALQAALNRVLALDPDTRDALLPLEGQRIALTLEAPALALQIRVHERRLLVGPVDQAHEPDLAVRSSLDGLLGQLPFLVNARRPGAPAGRLKVSGDAELARQLQQLAGRFDPDWQLPFVAVFGEMLGVQVASAVRAALQQARRSAVDLAQTAAEFVTEESRDVVPRAELEAFYDDVDELRDDVERLAARVTRLRAAGGAP
SIO_010081: PD885_RS01690
subclass of: SO_0000673
so part of: PD885_RS01690
location: 367091..367735
location: region:367091-367735:1
so has part: feature:367091-367735:1:exon

WP_002808196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367091-367735:1:exon

PD885_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: ubiB
locus tag: PD885_RS01695
old locus tag: PD885_00329
so part of: sequence
location: 367732..369405
location: region:367732-369405:1
so has part: feature:367732-369405:1:exon
subclass of: SO_0000010

61892803
type: Gene
SIO_000068: ncbigene

position:367732:1
position: 367732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369405:1
position: 369405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367732-369405:1:exon

PD885_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: ubiB
locus tag: PD885_RS01695
old locus tag: PD885_00329
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019304665.1
GO process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ubiquinone biosynthesis regulatory protein kinase UbiB
translation: MKALLRASRIGRVILRYRLDDLLQGTSVERWLRLAKPFVPRASAEIAAQSRGARLRLALEELGPIFVKFGQILSTRRDLIPADVAEELTLLQDRVKPFDGEAARLIVERALGLPVSVAFAAFDTVPLASASIAQVHAATLPPDINGMRREVVVKVLRPDIERQIDADITLLHSLAALVERTHPHADKIRPREVVAEIEGTLSAELDLQREGANASVLRRFWEGSDDLYVPEVIWSHTAERALTLERVYGIPSDDIAKLDAAGIDRKALAAKGVRVFYTQVFRDNFFHADAHAGNIWVDSDPERRLNPRFIALDFGIMGQLSQEDQYYLAENFMAIFHKDYRRMAELHVEAGWMPNNVRIDELEAAARSVCEPYFTRPLSEISLAQVLIKLFRVAQRYELTLQPQLILLQKTLLNIEGVGRQLDPRLDIWAVARPVLERILRERYSPRRVLGELRKRLPEIMTHAPDMPRLVHSWLKQQVEGRHQVDIRSAELHALDLSLRKLQTRVVTAITGSGLLVVAAVLYGLHPDGWYLGTVPVWSWVSGAAGSVALLVAWLRR
SIO_010081: PD885_RS01695
subclass of: SO_0000673
so part of: PD885_RS01695
location: 367732..369405
location: region:367732-369405:1
so has part: feature:367732-369405:1:exon

WP_002808195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367732-369405:1:exon

PD885_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01700
old locus tag: PD885_00330
pseudo: true
so part of: sequence
location: complement(369426..370792)
location: region:369426-370792:-1
so has part: feature:369426-370792:-1:exon
subclass of: SO_0000010

61892804
type: Gene
SIO_000068: ncbigene

position:369426:-1
position: 369426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370792:-1
position: 370792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369426-370792:-1:exon

PD885_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01700
old locus tag: PD885_00330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035783.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: PD885_RS01700
subclass of: SO_0000673
so part of: PD885_RS01700
location: complement(369426..370792)
location: region:369426-370792:-1
so has part: feature:369426-370792:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:369426-370792:-1:exon

PD885_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01710
old locus tag: PD885_00333
so part of: sequence
location: complement(371118..371579)
location: region:371118-371579:-1
so has part: feature:371118-371579:-1:exon
subclass of: SO_0000010

61892805
type: Gene
SIO_000068: ncbigene

position:371118:-1
position: 371118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371579:-1
position: 371579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371118-371579:-1:exon

PD885_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01710
old locus tag: PD885_00333
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003480214.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin family protein
translation: MRTWLLLCLLAVVPLAHAVDLPYDEHADASAQLRHALAAAKKAHKPTLVIFGANWCHDCRALDTSLHTAKNAPLISKSFVVVKVDVGNFDHNLDISQRYGDPIQKGIPAAVVVSPAGKLLYTTRAGELANARKMSDDGIYQFFDHVAHANQAR
SIO_010081: PD885_RS01710
subclass of: SO_0000673
so part of: PD885_RS01710
location: complement(371118..371579)
location: region:371118-371579:-1
so has part: feature:371118-371579:-1:exon

WP_002808192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371118-371579:-1:exon

PD885_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01715
old locus tag: PD885_00334
pseudo: true
so part of: sequence
location: 371595..>372059
location: region:371595-372059:1
so has part: feature:371595-372059:1:exon
subclass of: SO_0000010

61892806
type: Gene
SIO_000068: ncbigene

position:371595:1
position: 371595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372059:1
position: 372059
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371595-372059:1:exon

PD885_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01715
old locus tag: PD885_00334
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017156430.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: pseudouridylate synthase
SIO_010081: PD885_RS01715
subclass of: SO_0000673
so part of: PD885_RS01715
location: 371595..>372059
location: region:371595-372059:1
so has part: feature:371595-372059:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:371595-372059:1:exon

PD885_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01720
old locus tag: PD885_00335
so part of: sequence
location: complement(372122..372664)
location: region:372122-372664:-1
so has part: feature:372122-372664:-1:exon
subclass of: SO_0000010

61892807
type: Gene
SIO_000068: ncbigene

position:372122:-1
position: 372122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372664:-1
position: 372664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372122-372664:-1:exon

PD885_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01720
old locus tag: PD885_00335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005928595.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2059 domain-containing protein
translation: MPLPRFVAAAHAVARRLFLLAALAIATPAAFAQAPSDAEINRLLAASRAQTMLDTMLPQVEAMQQQQFAQLTAQRQLNSAQQAQLQRIQERTRQTVRKALSWSELRPMYVDIYKRSFSREDVLAMAEFYESSAGQRLLDKTPALTQNLMGAIQQKMLPMFADLQKDLEKIVNEPAAAQKP
SIO_010081: PD885_RS01720
subclass of: SO_0000673
so part of: PD885_RS01720
location: complement(372122..372664)
location: region:372122-372664:-1
so has part: feature:372122-372664:-1:exon

WP_002808187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:372122-372664:-1:exon

PD885_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: arfB
locus tag: PD885_RS01725
old locus tag: PD885_00336
so part of: sequence
location: 372758..373189
location: region:372758-373189:1
so has part: feature:372758-373189:1:exon
subclass of: SO_0000010

61892808
type: Gene
SIO_000068: ncbigene

position:372758:1
position: 372758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373189:1
position: 373189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372758-373189:1:exon

PD885_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: arfB
locus tag: PD885_RS01725
old locus tag: PD885_00336
EC number: 3.1.1.29
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011257289.1
GO function: GO:0003747 - translation release factor activity [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB
translation: MASDPIQITPSLTIPPSEIVERFVRASGAGGQNVNKVSTAVELRFDVAGSPTLPEPLRTRLLSRRDRRMTADGVLVIDAQRFRTQDRNRDDARERLFEIISACLSVPKRRVATKPSHGAKLRRLDAKRERSHIKRGRSASHWE
SIO_010081: PD885_RS01725
subclass of: SO_0000673
so part of: PD885_RS01725
location: 372758..373189
location: region:372758-373189:1
so has part: feature:372758-373189:1:exon

WP_002808185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:372758-373189:1:exon

PD885_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01730
old locus tag: PD885_00337
so part of: sequence
location: 373192..373821
location: region:373192-373821:1
so has part: feature:373192-373821:1:exon
subclass of: SO_0000010

61892809
type: Gene
SIO_000068: ncbigene

position:373192:1
position: 373192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373821:1
position: 373821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373192-373821:1:exon

PD885_RS01730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01730
old locus tag: PD885_00337
EC number: 2.3.1.23
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035483.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysophosphatidylcholine acyltransferase
translation: MSHTDPSLPPVTQANILLQPSPPSMPRAHGRFGRWFGRTGLRLTGWRLVGRLPDEPKLVMIVAPHSSNWDGFVGFAAKFALGFEVRVLGKSQLFWWPLGPLLRKLGAIPLDRSSPQGTIGQAVRLIRNSEQMWYVITPEGTRKRVEQWKAGFWKIASDSKVPILPVYFDYPSKTVGIGEPFWTGSDMAADIAAIRTWYRPWRGKHRDTL
SIO_010081: PD885_RS01730
subclass of: SO_0000673
so part of: PD885_RS01730
location: 373192..373821
location: region:373192-373821:1
so has part: feature:373192-373821:1:exon

WP_002808183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373192-373821:1:exon

PD885_RS20305
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS20305
old locus tag: PD885_00338
pseudo: true
so part of: sequence
location: 374049..>374153
location: region:374049-374153:1
so has part: feature:374049-374153:1:exon
subclass of: SO_0000010

61896316
type: Gene
SIO_000068: ncbigene

position:374049:1
position: 374049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374153:1
position: 374153
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374049-374153:1:exon

PD885_RS20305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS20305
old locus tag: PD885_00338
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: PD885_RS20305
subclass of: SO_0000673
so part of: PD885_RS20305
location: 374049..>374153
location: region:374049-374153:1
so has part: feature:374049-374153:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:374049-374153:1:exon

PD885_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: dcp
locus tag: PD885_RS01735
old locus tag: PD885_00339
so part of: sequence
location: 374395..376563
location: region:374395-376563:1
so has part: feature:374395-376563:1:exon
subclass of: SO_0000010

61892810
type: Gene
SIO_000068: ncbigene

position:374395:1
position: 374395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376563:1
position: 376563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374395-376563:1:exon

PD885_RS01735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: dcp
locus tag: PD885_RS01735
old locus tag: PD885_00339
EC number: 3.4.15.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017115821.1
GO function: GO:0008237 - metallopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidyl-dipeptidase Dcp
translation: MSRTVVLAVAITLALAACSGKKPSGKESTAVPEKTATTPAADAAPNPLLTASTLPFQAPPFDKIKDADYLPAFDEGMRLHLADIRKIADNPEPLTFDNTIEAMERSGETLARVSRIFFGLVQADTSDARQKIQEEIAPKLAAHQDEIYLDPKLFARVKTLYDQRDTLSLDPEQKRLVERDYEELVRAGAQLSETDKASLRKLNIEETKLSTQFHTRLMAASAAGAVVVDDKAKLDGLSEGDIAAAADAAKARKLAGNYLLTLQNTTQQPVLASLKDRQLRADVLKASETRAERGDANDTRQTIQRLAQLRAQKAKLLGFGNYAAYSLGDQMAKTPDAALKLLTDTVPAATAKARREVAEMQKVIDTQKGDFKLAASDWDFYAEQVRKAKYDLDEAQIKPYFELDNVLQNGVFYAATQLYGITFKQRTDIPTYHPDMKVYEVFDHDGTSMALFYTDYFKRDSKSGGAWMDEFVKQDGLTGAKPVVYNVCNFTKPAAGQPALLSFDDVTTLFHEFGHALHGMFSKVKYPSIAGTSTSRDFVEFPSQFNEHWASDPKVFAHYAKHYQTGAAMPPELVEKIKKARTFNSGYATTEYLSAALLDLAWHTQPADAPLHDVSKFEADALKRFKVDLAEVPPRYRSSYFDHIWGGGYSAGYYAYFWSKVLDEDAFEWFKENGGLNRKNGDAFRAKILSRGNTVDLATLYRDFRGNDPSVKALLKDRGLTE
SIO_010081: PD885_RS01735
subclass of: SO_0000673
so part of: PD885_RS01735
location: 374395..376563
location: region:374395-376563:1
so has part: feature:374395-376563:1:exon

WP_002808181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374395-376563:1:exon

PD885_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: xopN
locus tag: PD885_RS01740
old locus tag: PD885_00340
so part of: sequence
location: complement(376678..378864)
location: region:376678-378864:-1
so has part: feature:376678-378864:-1:exon
subclass of: SO_0000010

61892811
type: Gene
SIO_000068: ncbigene

position:376678:-1
position: 376678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378864:-1
position: 378864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376678-378864:-1:exon

PD885_RS01740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: xopN
locus tag: PD885_RS01740
old locus tag: PD885_00340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035486.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system effector XopN
translation: MKITTFANSVNRNASASNPNIQDIGKEASSSVLPSHSDIQPDTPLTILPRRPSRRGKEVAGATSHATPAATQAAVQSGAVGMHSVPPAVSSNLRGSRLTRLKDKLAADNRRQVQPQLAATLINAVRPMNGRVKLLDGTTVEERAATHADLLSRVRETDAMDWYKAQGLSEGEVSKLRRTALLSGMPNPTGSFLNNAMQYIVSPWINYATRQPWAGAGFGVATAAIAAPMNAAQQSAVVSLCESIREHGGHVIVPDKNQINDKHWLPDLAKALEIHVAEFGGCCDQFRELKNVADSTHSTTATGNLMAAAHKLLEAEARLHQGQHDFVMTQGAHDRQWMGNRWQAVPRILRSPLAGTLGLLSKTGAMRALSPTAQTVGALLMTAAQHVAAGFDEQAKQDYNNKLNLLYADVLTETGKSKFARGEPVAADDIDQSRLRKLIQSPTQALVKRVTNALASMEKALKAEVAASPSPQGAADADDLDLESGHGAGPAKALKLLSQDLQALREGKLDELDPDGVAAEVLLNAEKSVVSDQLISDIAKKYTLREFSAQTAQRIGQMFHLGVLGSAASSVIGKASSAAHGGARKVPTKQTLAISALSGAMAAVGALNQHTAITVKNNRREGDTDIGLKQQVLRGVMGGASEALSQRRATKASLKISELLQGNDVENLLQQARELIQQSRATSSRVQTAPSLTLPQAVKQLRPAGASAPQSHEVIVQIADDEAPPRPA
SIO_010081: PD885_RS01740
subclass of: SO_0000673
so part of: PD885_RS01740
location: complement(376678..378864)
location: region:376678-378864:-1
so has part: feature:376678-378864:-1:exon

WP_002808180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376678-378864:-1:exon

PD885_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01745
old locus tag: PD885_00341
pseudo: true
so part of: sequence
location: <379254..379493
location: region:379254-379493:1
so has part: feature:379254-379493:1:exon
subclass of: SO_0000010

61892812
type: Gene
SIO_000068: ncbigene

position:379254:1
position: 379254
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:379493:1
position: 379493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379254-379493:1:exon

PD885_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01745
old locus tag: PD885_00341
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005928578.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator C-terminal domain-containing protein
SIO_010081: PD885_RS01745
subclass of: SO_0000673
so part of: PD885_RS01745
location: <379254..379493
location: region:379254-379493:1
so has part: feature:379254-379493:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:379254-379493:1:exon

PD885_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01750
pseudo: true
so part of: sequence
location: 380044..381202
location: region:380044-381202:1
so has part: feature:380044-381202:1:exon
subclass of: SO_0000010

61892813
type: Gene
SIO_000068: ncbigene

position:380044:1
position: 380044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381202:1
position: 381202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380044-381202:1:exon

PD885_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: PD885_RS01750
subclass of: SO_0000673
so part of: PD885_RS01750
location: 380044..381202
location: region:380044-381202:1
so has part: feature:380044-381202:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:380044-381202:1:exon

PD885_RS21250
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21250
so part of: sequence
location: 381199..381345
location: region:381199-381345:1
so has part: feature:381199-381345:1:exon
subclass of: SO_0000010

61896435
type: Gene
SIO_000068: ncbigene

position:381199:1
position: 381199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381345:1
position: 381345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381199-381345:1:exon

PD885_RS21250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVYGTLGVSVRDEQMVRIRGIEYRVFTKQVEVDGVNQAKLWLKPEQF
SIO_010081: PD885_RS21250
subclass of: SO_0000673
so part of: PD885_RS21250
location: 381199..381345
location: region:381199-381345:1
so has part: feature:381199-381345:1:exon

WP_156775373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381199-381345:1:exon

PD885_RS21855
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21855
pseudo: true
so part of: sequence
location: complement(<381516..>381673)
location: region:381516-381673:-1
so has part: feature:381516-381673:-1:exon
subclass of: SO_0000010

69055298
type: Gene
SIO_000068: ncbigene

position:381516:-1
position: 381516
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:381673:-1
position: 381673
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381516-381673:-1:exon

PD885_RS21855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002804395.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: PD885_RS21855
subclass of: SO_0000673
so part of: PD885_RS21855
location: complement(<381516..>381673)
location: region:381516-381673:-1
so has part: feature:381516-381673:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:381516-381673:-1:exon

PD885_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: glpK
locus tag: PD885_RS01755
old locus tag: PD885_00345
so part of: sequence
location: complement(381891..383390)
location: region:381891-383390:-1
so has part: feature:381891-383390:-1:exon
subclass of: SO_0000010

61892814
type: Gene
SIO_000068: ncbigene

position:381891:-1
position: 381891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383390:-1
position: 383390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381891-383390:-1:exon

PD885_RS01755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: glpK
locus tag: PD885_RS01755
old locus tag: PD885_00345
EC number: 2.7.1.30
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010368988.1
GO function: GO:0004370 - glycerol kinase activity [Evidence IEA]
GO process: GO:0006071 - glycerol metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol kinase GlpK
translation: MEKQYVLAIDQGTTSSRAMLFDRQGKVAGVAQREFSQIFPQPSWVEHNPREIMTSVYTTITELLNNAQIDARSIAGIGITNQRETAVVWDKATGQPIYNAIVWQSRQTNDICTQLKAAGHEQMVRDKTGLLIDAYFSGTKVKWILDRVEGARERARRGELAFGTIDSWLIWNLTGGKVHVTDYTNASRTMMYNIHTLEWDADLLEMLDVPPQMLPEVRSSSEVYGMTQTQYFYGEQVSIAGIAGDQQAALFGQACFEPGMAKNTYGTGCFMLMNTGNKAVASTAGLLTTIAWGIDGKVEYALEGAIFVAGSVVQWLRDGLRMLGKASDSQAYAERAGDNDGAYIVPAFVGLGAPYWRSDIRGAVFGLTRGTSKEHFIRAAVESMAYQTRDVLTATQLDSGIELKELRADGGAIANDFLAQFQSDTLNVPVLRPEVAETTALGAAYLAGLATGFWSSREEIAKQWAVDRRFTPDMAEDKRKQLYAGWQQAVEATMGFRIS
SIO_010081: PD885_RS01755
subclass of: SO_0000673
so part of: PD885_RS01755
location: complement(381891..383390)
location: region:381891-383390:-1
so has part: feature:381891-383390:-1:exon

WP_088056615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381891-383390:-1:exon

PD885_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01760
old locus tag: PD885_00346
so part of: sequence
location: complement(383532..384353)
location: region:383532-384353:-1
so has part: feature:383532-384353:-1:exon
subclass of: SO_0000010

61892815
type: Gene
SIO_000068: ncbigene

position:383532:-1
position: 383532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384353:-1
position: 384353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383532-384353:-1:exon

PD885_RS01760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01760
old locus tag: PD885_00346
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035613.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MIP/aquaporin family protein
translation: MSRQLVGELISEAVAMFIIIAFGDSVAAMYILYDPSPYQNAYWGVCIAWGLSVTLAIYVTGSVSGTHANPAVTLALALFRDFSWKKVLPYWVAQVVGAFLGAAIVYQLYGPVIDHYNQVQQLTRQAGGAAGVFFTAPGLAVTPMHALVDQIIITAFLIFGVFAITEEFNEAAPTANSGALMIGLLVATLGASMGYLEAWAMNPARDFGPRLFAYVAGWGEAALPAKDNYWWVPIVGPLIGGPIGALAYQWLILPFLPACVRHLQGGTRPLDPP
SIO_010081: PD885_RS01760
subclass of: SO_0000673
so part of: PD885_RS01760
location: complement(383532..384353)
location: region:383532-384353:-1
so has part: feature:383532-384353:-1:exon

WP_088056616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383532-384353:-1:exon

PD885_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: glpD
locus tag: PD885_RS01765
old locus tag: PD885_00348
so part of: sequence
location: complement(384532..386043)
location: region:384532-386043:-1
so has part: feature:384532-386043:-1:exon
subclass of: SO_0000010

61892816
type: Gene
SIO_000068: ncbigene

position:384532:-1
position: 384532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386043:-1
position: 386043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384532-386043:-1:exon

PD885_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: glpD
locus tag: PD885_RS01765
old locus tag: PD885_00348
EC number: 1.1.5.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005920025.1
GO component: GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO function: GO:0004368 - glycerol-3-phosphate dehydrogenase (quinone) activity [Evidence IEA]
GO process: GO:0006072 - glycerol-3-phosphate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol-3-phosphate dehydrogenase
translation: MGERYDLLVIGGGINGVGIARDAAGRGLSVCLCEQDDLAAHTSSASTKLIHGGLRYLEQYEFALVGKALAEREVLLRLAPHIIWPLRFLLPHQPHLRPAWMIRAGLFLYDHLGGSKRSLPRSRQLSLRTHPVGQPLQESLRTGFVYSDAWVQDARLVVLNAMDAARRGANILTRTRCVGAWRDAGFWYAELEDRDGRRTVQARALANAAGPWAVSFLDNVAAVPHRHALRLVKGSHIVVPKLFDHDHAYIFQQPDRRIVFAIPYEHDFTLIGTTDVDYAADPASPKIDAAEAQYLCDAVNLYFQQQISPQDVVWNYSGVRPLLDDAEDNAAEVTRDYQLEVVTDGASLLNVFGGKLTTYRKLAEEAVDRLTHALGARKPAWTARGDALPGGEQRDIASLLERVRNAHPWLPAATAQRLVRNYGTCAERLLGDAQDLAGLGTHFGADLYQAEVEYLRQHEWALTADDILWRRSKLGLRIDAAGRQRLEDYLQTQSVQQTDVVST
SIO_010081: PD885_RS01765
subclass of: SO_0000673
so part of: PD885_RS01765
location: complement(384532..386043)
location: region:384532-386043:-1
so has part: feature:384532-386043:-1:exon

WP_002808174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384532-386043:-1:exon

PD885_RS01770
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01770
old locus tag: PD885_00349
so part of: sequence
location: complement(386271..387098)
location: region:386271-387098:-1
so has part: feature:386271-387098:-1:exon
subclass of: SO_0000010

61892817
type: Gene
SIO_000068: ncbigene

position:386271:-1
position: 386271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387098:-1
position: 387098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386271-387098:-1:exon

PD885_RS01770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01770
old locus tag: PD885_00349
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016904930.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DeoR family transcriptional regulator
translation: MRDHLRMESTHYKTVPALALNPRQEQLVALVRQQGFADVEGLATRFEVTPQTIRRDLTLLCDAGVLRRYHGGVSMPSSVENLAYTARKAIQAREKQLIAAHLARFIPDDASLFINLGTTNEEVARALLQHRGLRVITNNLNVAVMLSANPSFEVIVAGGVVRGRDQGVTGATTVELIRQFKVDFGVIGISGIDLDGTLLDFDYQEVRVAQAIIEHSRQVLLAADHSKFGRNAMVRLGAIAQIHDWFTDRPPPQELAAILAEAGTRVHLADAGGAG
SIO_010081: PD885_RS01770
subclass of: SO_0000673
so part of: PD885_RS01770
location: complement(386271..387098)
location: region:386271-387098:-1
so has part: feature:386271-387098:-1:exon

WP_002808173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386271-387098:-1:exon

PD885_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01775
old locus tag: PD885_00350
pseudo: true
so part of: sequence
location: 387364..>387825
location: region:387364-387825:1
so has part: feature:387364-387825:1:exon
subclass of: SO_0000010

61892818
type: Gene
SIO_000068: ncbigene

position:387364:1
position: 387364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387825:1
position: 387825
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387364-387825:1:exon

PD885_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01775
old locus tag: PD885_00350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017156476.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: alpha/beta fold hydrolase
SIO_010081: PD885_RS01775
subclass of: SO_0000673
so part of: PD885_RS01775
location: 387364..>387825
location: region:387364-387825:1
so has part: feature:387364-387825:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:387364-387825:1:exon

PD885_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01780
old locus tag: PD885_00351
so part of: sequence
location: 388076..388936
location: region:388076-388936:1
so has part: feature:388076-388936:1:exon
subclass of: SO_0000010

61892819
type: Gene
SIO_000068: ncbigene

position:388076:1
position: 388076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388936:1
position: 388936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388076-388936:1:exon

PD885_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01780
old locus tag: PD885_00351
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007968468.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PA4780 family RIO1-like protein kinase
translation: MKTPKGLQPLIDDGIIDEVLRPLKSGKEASVYVVSTGADILCAKVYKDMAQRSFQARVQYQEGRKVRGSRQARAMGKATKFGRREAETAWKNTEAEVLYQLMDASVHVPKPRGYFHGVLLMDLVTDEAGHSAPRLGEVDLEPEQARVFHTSLIGDVVKMLSLGLVHGDLSEYNVLVSPDGPVLIDFPQVVSAAGNNAARDMLLRDVHNLRDCLGRFVPELLETYYGEEMWALFEKGELRPDSVLTGRFKFDTRRVDVRVIRASIEDARQENLIRQQGRAAAAEDED
SIO_010081: PD885_RS01780
subclass of: SO_0000673
so part of: PD885_RS01780
location: 388076..388936
location: region:388076-388936:1
so has part: feature:388076-388936:1:exon

WP_002808171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388076-388936:1:exon

PD885_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01790
pseudo: true
so part of: sequence
location: 389362..390329
location: region:389362-390329:1
so has part: feature:389362-390329:1:exon
subclass of: SO_0000010

61892820
type: Gene
SIO_000068: ncbigene

position:389362:1
position: 389362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390329:1
position: 390329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389362-390329:1:exon

PD885_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008578108.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: alpha/beta hydrolase
SIO_010081: PD885_RS01790
subclass of: SO_0000673
so part of: PD885_RS01790
location: 389362..390329
location: region:389362-390329:1
so has part: feature:389362-390329:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:389362-390329:1:exon

PD885_RS01795
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: mnmG
locus tag: PD885_RS01795
old locus tag: PD885_00354
so part of: sequence
location: complement(390452..392356)
location: region:390452-392356:-1
so has part: feature:390452-392356:-1:exon
subclass of: SO_0000010

61892821
type: Gene
SIO_000068: ncbigene

position:390452:-1
position: 390452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392356:-1
position: 392356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390452-392356:-1:exon

PD885_RS01795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: mnmG
locus tag: PD885_RS01795
old locus tag: PD885_00354
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012437137.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
translation: MSESFYRYDVIVIGGGHAGTEAALASARTGALTLLLTHNIETVGAMSCNPAIGGIGKGHLVKEIDALGGAMARAADLAGIQWRTLNASKGPAVRATRCQADRNRYRNAIRCVVEAQPNLTVFQAAVDDLIIHNGAAEGDSVRGVMTQTGLRFEATSVVLTAGTFLAGKIHVGQTQYAAGRMGDPPATTLAARLRERAFAIDRLKTGTPPRIDGRTLHYSVMQEQPGDDPLPVMSFMGRRSDHPRQVSCWITHTTEQTHAIIRSALHRSPLYSGQIEGIGPRYCPSIEDKVVRFADKTSHQIFVEPEGLEVTEIYPNGISTSLPFDVQLALVRSIHGFAQAHITRPGYAIEYDFFDPRGLKASLETKAVGGLFFAGQINGTTGYEEAAAQGLLAGLNAARRVQALPAWSPRRDQAYLGVLVDDLITHGTTEPYRMFTSRAEYRLQLREDNADARLTGVARAMGLVDDARWARFSAKQEAVQRESARLSALWATPGNALGREVAETLGVEVSRETNVLDLIKRPELNYATLMQVPTLGPGVEDAQVAEQVEIGVKYAGYLARQRDDIARQQRHETTPIPDGFDYSGVRGLSIEVQQKLERVCPQSIGQAQRIPGMTPAAMSLLLVHLERARRSQVA
SIO_010081: PD885_RS01795
subclass of: SO_0000673
so part of: PD885_RS01795
location: complement(390452..392356)
location: region:390452-392356:-1
so has part: feature:390452-392356:-1:exon

WP_002808169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390452-392356:-1:exon

PD885_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01805
old locus tag: PD885_00355
so part of: sequence
location: complement(392937..393410)
location: region:392937-393410:-1
so has part: feature:392937-393410:-1:exon
subclass of: SO_0000010

61892822
type: Gene
SIO_000068: ncbigene

position:392937:-1
position: 392937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393410:-1
position: 393410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392937-393410:-1:exon

PD885_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01805
old locus tag: PD885_00355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017171656.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLHLIFAAGLMALSGCATYDYAGGGSGGYYRGAPAVQYRYRPDDSPYSYGSPYEVPYEYGAGSIGLYDYPVYPVYRDGGGYYYPPNDRRPQYRPSRPNGSFNNRPRPDGPRPKQPDRLPAAEAPPSRPSPRIGAPPRVIREIQRQTAPRNTGEQIP
SIO_010081: PD885_RS01805
subclass of: SO_0000673
so part of: PD885_RS01805
location: complement(392937..393410)
location: region:392937-393410:-1
so has part: feature:392937-393410:-1:exon

WP_002808168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392937-393410:-1:exon

PD885_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01810
old locus tag: PD885_00356
so part of: sequence
location: 393569..394528
location: region:393569-394528:1
so has part: feature:393569-394528:1:exon
subclass of: SO_0000010

61892823
type: Gene
SIO_000068: ncbigene

position:393569:1
position: 393569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394528:1
position: 394528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393569-394528:1:exon

PD885_RS01810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01810
old locus tag: PD885_00356
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005920032.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxal-phosphate dependent enzyme
translation: MIDPLPLTHSDILQAAARIAPHCAPTPLLTSHSLDALSGAQLIFKAEHLQRSGAFKFRGACNAVWSLPIELAARGVVTHSSGNHGAALALAARSRGIGCHVVVPEGAVAAKLANISRHGATLWWCAPTIAAREQLCAEVQASSSAAIVHPYTDPAVIAGQGTATLELLHQSGGLDVLVTPVGGGGLAAGAALALQCMPDCELVLAEPSGAADTARSLAAGERLVDFVPDTVCDGLRGTLGAPNFALLQAAGAQVITVDDAAVVRAMRLIWQILKQVVEPSSAITLAAVLADPARFAGRRVGLILSGGNVDLDALPWAAA
SIO_010081: PD885_RS01810
subclass of: SO_0000673
so part of: PD885_RS01810
location: 393569..394528
location: region:393569-394528:1
so has part: feature:393569-394528:1:exon

WP_002808167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393569-394528:1:exon

PD885_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01815
old locus tag: PD885_00357
so part of: sequence
location: 394513..395130
location: region:394513-395130:1
so has part: feature:394513-395130:1:exon
subclass of: SO_0000010

61892824
type: Gene
SIO_000068: ncbigene

position:394513:1
position: 394513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395130:1
position: 395130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394513-395130:1:exon

PD885_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01815
old locus tag: PD885_00357
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006451966.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YdcF family protein
translation: MGRGVSRRSRGIGLWGWCWRLCMLALIWLVGVAGWIVFIGDRDQAAPADVIIVLGAAAYDARPSPVFEERIRHALDLYAQGYAPRMLFTGGFGHGARFAESQVARRYALRHGIPPEAIVIETVSRTTRQNLEQARTLMARHGMHRAIIVSDPLHMARALRLSQELGVDALASSTPSTRFRSFHTSWRFLLQEVYFFHRDLLVQGS
SIO_010081: PD885_RS01815
subclass of: SO_0000673
so part of: PD885_RS01815
location: 394513..395130
location: region:394513-395130:1
so has part: feature:394513-395130:1:exon

WP_002808165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394513-395130:1:exon

PD885_RS20315
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS20315
pseudo: true
so part of: sequence
location: <395250..>395568
location: region:395250-395568:1
so has part: feature:395250-395568:1:exon
subclass of: SO_0000010

61896317
type: Gene
SIO_000068: ncbigene

position:395250:1
position: 395250
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:395568:1
position: 395568
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395250-395568:1:exon

PD885_RS20315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS20315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: PD885_RS20315
subclass of: SO_0000673
so part of: PD885_RS20315
location: <395250..>395568
location: region:395250-395568:1
so has part: feature:395250-395568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:395250-395568:1:exon

PD885_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: lpxO
locus tag: PD885_RS01825
old locus tag: PD885_00359
so part of: sequence
location: complement(395688..396593)
location: region:395688-396593:-1
so has part: feature:395688-396593:-1:exon
subclass of: SO_0000010

61892825
type: Gene
SIO_000068: ncbigene

position:395688:-1
position: 395688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396593:-1
position: 396593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395688-396593:-1:exon

PD885_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: lpxO
locus tag: PD885_RS01825
old locus tag: PD885_00359
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012443706.1
GO process: GO:0018193 - peptidyl-amino acid modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid A hydroxylase LpxO
translation: MLKWLIIALFIASALYIHYRGRVRHRLSRQLMDHSTFMAPINTLMYLCSRVPTTPFIDPGKEFPELAPLRANWSLIRDEALRLRQMEKIRAADGYTDIGFNSFFRRGWKRFYLKWYGTAHPSAAELCPQTTALLHAIPTVKAAVFAQLPPGSELRPHRDPFAGSMRLHLGLVTPNDDRCFIDVDGQRHSWRDGEWTMFDETYIHYARNDTDQDRIILFCDIERPMRWHWAAAVNRFVGRSLLSAGASPNQEGDKTGGINRVFRYFYVGRLKAKTLKERNNPLYQVLKWSIFILVVVGIVLL
SIO_010081: PD885_RS01825
subclass of: SO_0000673
so part of: PD885_RS01825
location: complement(395688..396593)
location: region:395688-396593:-1
so has part: feature:395688-396593:-1:exon

WP_002804534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395688-396593:-1:exon

PD885_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: bioC
locus tag: PD885_RS01830
old locus tag: PD885_00360
so part of: sequence
location: complement(396856..397740)
location: region:396856-397740:-1
so has part: feature:396856-397740:-1:exon
subclass of: SO_0000010

61892826
type: Gene
SIO_000068: ncbigene

position:396856:-1
position: 396856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397740:-1
position: 397740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396856-397740:-1:exon

PD885_RS01830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: bioC
locus tag: PD885_RS01830
old locus tag: PD885_00360
EC number: 2.1.1.197
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003485708.1
GO function: GO:0008171 - O-methyltransferase activity [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: malonyl-ACP O-methyltransferase BioC
translation: MNSTFDPRHVRRAFARAASSYVAAAALQREAETRLLESLDYLGDQIPKVVLDVGAGPGHASSAIKKRWPKAQVIALDQAMPMLRQARKAAGWWKPFVQVCADARALPIADGSVDVIFSNLCLQWVEDLPAVFAGFRRALRPGGLLLCSTFGPETLSELRDAFAQADTAPHVSRFPPIAQFGDALLMSGFRDPVLDRDLFTLTYNDLSTLMRELRAMGATNALSNRRATLTGRGRFAAASAAYEPLRRPDGALPSSWEVIYAHAWAPAPGAPIREHGHDIASVPLASIPIRRRID
SIO_010081: PD885_RS01830
subclass of: SO_0000673
so part of: PD885_RS01830
location: complement(396856..397740)
location: region:396856-397740:-1
so has part: feature:396856-397740:-1:exon

WP_002804535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396856-397740:-1:exon

PD885_RS21685
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21685
so part of: sequence
location: complement(398017..398199)
location: region:398017-398199:-1
so has part: feature:398017-398199:-1:exon
subclass of: SO_0000010

61896504
type: Gene
SIO_000068: ncbigene

position:398017:-1
position: 398017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398199:-1
position: 398199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398017-398199:-1:exon

PD885_RS21685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21685
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCARSCIPRHRRCRLQPVLVLVLVLVLVLVLVLVLVLVLVLVLVMVMVSIGTFSWGSFRD
SIO_010081: PD885_RS21685
subclass of: SO_0000673
so part of: PD885_RS21685
location: complement(398017..398199)
location: region:398017-398199:-1
so has part: feature:398017-398199:-1:exon

WP_197685829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398017-398199:-1:exon

PD885_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01840
old locus tag: PD885_00362
so part of: sequence
location: complement(398249..398902)
location: region:398249-398902:-1
so has part: feature:398249-398902:-1:exon
subclass of: SO_0000010

61892827
type: Gene
SIO_000068: ncbigene

position:398249:-1
position: 398249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398902:-1
position: 398902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398249-398902:-1:exon

PD885_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01840
old locus tag: PD885_00362
inference: COORDINATES: protein motif:HMM:NF024950.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MASEGVKVVIVARGRDVLEQADDALHALPGAGEVRSAVADIVTPQGRTDALAACPQVDIPINNTGGPPPGDFRQWERENWLRALDANMLAPIELIRVSLDAMRAQRFGCIVNITSRCGEGADRHPRPVQWRARRPHRLRCRAGTQRSRRQCHDQPGQFATDRLRGNFAAIAQQQSSTAQDVAERKRAGIPARRFGEPDEFGAACVFLCSAQAAYITG
SIO_010081: PD885_RS01840
subclass of: SO_0000673
so part of: PD885_RS01840
location: complement(398249..398902)
location: region:398249-398902:-1
so has part: feature:398249-398902:-1:exon

WP_250637301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398249-398902:-1:exon

PD885_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: bioH
locus tag: PD885_RS01845
old locus tag: PD885_00363
so part of: sequence
location: complement(399025..399786)
location: region:399025-399786:-1
so has part: feature:399025-399786:-1:exon
subclass of: SO_0000010

61892828
type: Gene
SIO_000068: ncbigene

position:399025:-1
position: 399025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399786:-1
position: 399786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399025-399786:-1:exon

PD885_RS01845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: bioH
locus tag: PD885_RS01845
old locus tag: PD885_00363
EC number: 3.1.1.85
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007968482.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pimeloyl-ACP methyl ester esterase BioH
translation: MHIDVIGQGPALVFLHGWALHGGVFAPLVERLAPHYQVHLVDLPGHGFSREDSTLLALPYVVAEIAAAIPPAVWIGWSLGGLFALHAAATQPQVRGLAMIAATPRFVKGNDWPDAVEREIFLQFGQDLSRDYRGTLERFLALDTLGSAHARAELRSLRETLTARGEPAAEALQQGLSLLERTDLRRALQQLARPSLWIAGQRDRLVPAAGVHAAAALAPQAQALTITGGGHAPFLGHAEQVAEALQHFVASLP
SIO_010081: PD885_RS01845
subclass of: SO_0000673
so part of: PD885_RS01845
location: complement(399025..399786)
location: region:399025-399786:-1
so has part: feature:399025-399786:-1:exon

WP_002804536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399025-399786:-1:exon

PD885_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01850
old locus tag: PD885_00364
pseudo: true
so part of: sequence
location: complement(<399919..400197)
location: region:399919-400197:-1
so has part: feature:399919-400197:-1:exon
subclass of: SO_0000010

61892829
type: Gene
SIO_000068: ncbigene

position:399919:-1
position: 399919
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:400197:-1
position: 400197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399919-400197:-1:exon

PD885_RS01850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01850
old locus tag: PD885_00364
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005994879.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: PD885_RS01850
subclass of: SO_0000673
so part of: PD885_RS01850
location: complement(<399919..400197)
location: region:399919-400197:-1
so has part: feature:399919-400197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:399919-400197:-1:exon

PD885_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: bioF
locus tag: PD885_RS01855
old locus tag: PD885_00365
so part of: sequence
location: complement(400339..401544)
location: region:400339-401544:-1
so has part: feature:400339-401544:-1:exon
subclass of: SO_0000010

61892830
type: Gene
SIO_000068: ncbigene

position:400339:-1
position: 400339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401544:-1
position: 401544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400339-401544:-1:exon

PD885_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: bioF
locus tag: PD885_RS01855
old locus tag: PD885_00365
EC number: 2.3.1.47
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016903255.1
GO function: GO:0008710 - 8-amino-7-oxononanoate synthase activity [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 8-amino-7-oxononanoate synthase
translation: MARPDLHERIASLRTLRVAQERVRVRRQVSRRDGVRLEIDGRWLTGFCSNDYLGLSQQFEVIAALQDAAARDGAGATASHLICGHHTAHEMLEREIAEWLGYPSALLFGSGFIANLAVQQALLSEEDDVCVQDRLNHASLLDATRLAGCRLRRYPHLDVEGAMRQLKGSPDGVAMLASDGVFSMDGDVAPLRALSLVARTQEALFYVDDAHGVGVLGPQGRGCVADAGLGLAEVPLQLVTLGKALGGYGAVVVGEQALVRHLTETARPYIYTTALPPAQVAATLAAVRLARRDDWRRARLVELISTFRNGARRHGFELMASDTPIQPLLCGEEATVMAMSAALEQSGFLVGAIRPPTVPEGKARLRVTLSALHTPQQVQALIEAIVQARDVISRQQLRVSA
SIO_010081: PD885_RS01855
subclass of: SO_0000673
so part of: PD885_RS01855
location: complement(400339..401544)
location: region:400339-401544:-1
so has part: feature:400339-401544:-1:exon

WP_002804540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400339-401544:-1:exon

PD885_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: bioB
locus tag: PD885_RS01860
old locus tag: PD885_00366
so part of: sequence
location: complement(401636..402670)
location: region:401636-402670:-1
so has part: feature:401636-402670:-1:exon
subclass of: SO_0000010

61892831
type: Gene
SIO_000068: ncbigene

position:401636:-1
position: 401636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402670:-1
position: 402670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401636-402670:-1:exon

PD885_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: bioB
locus tag: PD885_RS01860
old locus tag: PD885_00366
EC number: 2.8.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010368929.1
GO function: GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin synthase BioB
translation: MSVVVRHDWDREELQALFDLPFPELLHRAASVHRAHFDPAEVQVSTLLSVKTGGCPEDCAYCPQAQRYDTGVTAQKLMETEEVVAKARQAKAAGASRFCMGAAWRSPKERDIPKVAAMIRDVKAMGLETCATLGMLDAGQARALKDAGLDYYNHNLDTAPDYYDSIIHTRQYQDRLNTLEHVRDVGLKTCCGGIVGMGETREHRIGLLLALSTLPAHPDSVPINQLVQVAGTPLHGTQQLDPFEFVRMIAVARISMPKSMVRLSAGREAMSDELQALCFLAGANSIFYGEKLLTTGNPDTERDLALFQRLGLRPMQVTVDAAEHDHHGTVHADITCSAACEHAA
SIO_010081: PD885_RS01860
subclass of: SO_0000673
so part of: PD885_RS01860
location: complement(401636..402670)
location: region:401636-402670:-1
so has part: feature:401636-402670:-1:exon

WP_002804542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401636-402670:-1:exon

PD885_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01865
old locus tag: PD885_00367
so part of: sequence
location: 402720..403445
location: region:402720-403445:1
so has part: feature:402720-403445:1:exon
subclass of: SO_0000010

61892832
type: Gene
SIO_000068: ncbigene

position:402720:1
position: 402720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403445:1
position: 403445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402720-403445:1:exon

PD885_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01865
old locus tag: PD885_00367
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017115760.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ComF family protein
translation: MEDAVNFKEVRSVYKWPRRVLRLLLPSLCLVCAEAGTADYDLCLWCRAALPDHGHACPRCATQLYAPDGVALCGQCLQHPPPLQHVHACFTYRWPVDGLLRRFKFHQDLAAGLLLSELMARRCAGLPRPQALVPVSLHRQRLRQRGYDQALELAKPLGRALQLPCLPLLQRVRATAPQSELDAAERQRNLRDAFVVRGALPAHVALVDDVMTTGATLHAAAQALRRAGVQRVDAWVCARVP
SIO_010081: PD885_RS01865
subclass of: SO_0000673
so part of: PD885_RS01865
location: 402720..403445
location: region:402720-403445:1
so has part: feature:402720-403445:1:exon

WP_172404488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402720-403445:1:exon

PD885_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: ubiA
locus tag: PD885_RS01870
old locus tag: PD885_00368
so part of: sequence
location: complement(403674..404579)
location: region:403674-404579:-1
so has part: feature:403674-404579:-1:exon
subclass of: SO_0000010

61892833
type: Gene
SIO_000068: ncbigene

position:403674:-1
position: 403674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404579:-1
position: 404579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403674-404579:-1:exon

PD885_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: ubiA
locus tag: PD885_RS01870
old locus tag: PD885_00368
EC number: 2.5.1.39
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011050286.1
GO function: GO:0008412 - 4-hydroxybenzoate octaprenyltransferase activity [Evidence IEA]
GO process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxybenzoate octaprenyltransferase
translation: MSKHGVEQIPAASALTWQQRLGQYWKLVRGDRPIGSLLLLWPTWWALWLAADGMPPLWTLLVFTAGVWLTRSAGCVINDYADRWLDPHVERTKSRPLAVGAVSGREALWLFVLLMLVAFALVLTLNWLTVALSVPGVFLAASYPYLKRHTHLPQVYLGMAFGWGIPMGFAAVQGSVPLLAWLLYAANILWATAYDTWYAMVDREDDIRMGSKSTAILFGEFDLVAQGVLYALMFATLALVGVRAGLTAAYWAGLGVAALLVIYEFHIARHRERGPCFRAFLHNNWVGLAIFVSIAASLALR
SIO_010081: PD885_RS01870
subclass of: SO_0000673
so part of: PD885_RS01870
location: complement(403674..404579)
location: region:403674-404579:-1
so has part: feature:403674-404579:-1:exon

WP_002804547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403674-404579:-1:exon

PD885_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01875
old locus tag: PD885_00369
so part of: sequence
location: 404937..405013
location: region:404937-405013:1
so has part: feature:404937-405013:1:exon
subclass of: SO_0000663

61892834
type: Gene
SIO_000068: ncbigene

position:404937:1
position: 404937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405013:1
position: 405013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404937-405013:1:exon

PD885_RS01875
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 48664
locus tag: PD885_RS01875
old locus tag: PD885_00369
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:404971..404973,aa:Arg,seq:ccg)
SIO_010081: PD885_RS01875
subclass of: SO_0000673
so part of: PD885_RS01875
location: 404937..405013
location: region:404937-405013:1
so has part: feature:404937-405013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:404937-405013:1:exon

PD885_RS01880
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01880
old locus tag: PD885_00370
so part of: sequence
location: complement(405265..405606)
location: region:405265-405606:-1
so has part: feature:405265-405606:-1:exon
subclass of: SO_0000010

61892835
type: Gene
SIO_000068: ncbigene

position:405265:-1
position: 405265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405606:-1
position: 405606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405265-405606:-1:exon

PD885_RS01880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01880
old locus tag: PD885_00370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007974834.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HPF/RaiA family ribosome-associated protein
translation: MQIQIQTDKHVPHDPSVVQHVEKTCSAQLAHFASDITRVEVHLRDENGQRGGAADRTCSIEAHIAGLPPIAATNSAETTASAVTGAARKLRAAIEHARGKQQSKAAAPPPEHI
SIO_010081: PD885_RS01880
subclass of: SO_0000673
so part of: PD885_RS01880
location: complement(405265..405606)
location: region:405265-405606:-1
so has part: feature:405265-405606:-1:exon

WP_002804548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405265-405606:-1:exon

PD885_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01885
old locus tag: PD885_00371
so part of: sequence
location: 405964..408390
location: region:405964-408390:1
so has part: feature:405964-408390:1:exon
subclass of: SO_0000010

61892836
type: Gene
SIO_000068: ncbigene

position:405964:1
position: 405964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408390:1
position: 408390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405964-408390:1:exon

PD885_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01885
old locus tag: PD885_00371
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017112899.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3772 domain-containing protein
translation: MRRVLLIAALWMVSVGAAVAQDQDTLLEDAQTQLDSMQKVLTQAEAGMDESDTDQLRKLADDVIGAQRQAQDLARTLEPPLKELSVRLEGLGVEQKNEPPDLHDQRQSLTKERDRLDAEFKRANLLALEAKDLADRLESERAHRFSELLSTRVASPLSPKLWNQIAQQWPDDRARLQGLSDKAVQVVRTGAPANGIAGLVTGTLVALLLAFPLRIFLRHLGRRYAASRAPGGRLRRSGLALWFLLVGTLSLGTAVWALAESVRALSELPADLEQLLSAVVVISYVAAFVGSLTASLLMKHQPTWRLFPLDDATVDRLRVHCLATAAVSWCSGMAIRINDVARSSSALTTATDAVAALLYAGLILSALAGLSLSLRAHAANVGAADPGSSAPPPVVSRGGGYIVLIRLLGHLAVIVALVAALFGYINLALFVEQQIIWITLVCSVLGLLVMFADDLTTWVFKPESRFSRALSHALSISSSRLVQVGLLMSAAVRVLLVLLGIAALVTPYGANLAAVTGWLENVSHGITIGKELIITPSDVARALCVFLLGMGLVHVVQKWLLNTYLPKTELDAGARNSISTVARYLGWLIVVVWGLTALGLDLKRLALVLSALSVGIGFGLQAITQNFVSGLILLAERPVKIGDWVRIGDQEGDVRKISVRATEIQVGDRSTLIVPNSELITKSVRNMTLSNPMGRVQLQFSVPLETDVAKVRDMLLALFSEHAKVLADPVPLVFIDSVAGGHVNFNSFAYVSSPRDSYGVRSELFFTLLQRMGAMGIALQSPQEIRFSRAGAAVARDAGDGESSTSSQ
SIO_010081: PD885_RS01885
subclass of: SO_0000673
so part of: PD885_RS01885
location: 405964..408390
location: region:405964-408390:1
so has part: feature:405964-408390:1:exon

WP_040762384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405964-408390:1:exon

PD885_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01890
old locus tag: PD885_00372
so part of: sequence
location: complement(408575..410299)
location: region:408575-410299:-1
so has part: feature:408575-410299:-1:exon
subclass of: SO_0000010

61892837
type: Gene
SIO_000068: ncbigene

position:408575:-1
position: 408575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410299:-1
position: 410299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408575-410299:-1:exon

PD885_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01890
old locus tag: PD885_00372
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019301292.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AarF/UbiB family protein
translation: MALSPNDPYRAPAQPASPADTSVVGGMSRRTQILRLLLRYRGSGVFAGMSLDPAAINEYEVPAEGTPDQFVSDLESLGPTFVKLGQMLSTRPDIVPPEFATALERMQENTSSVAVERIRQIIEEELGVSVKKAFSFFDPVPLGCASLAQVHRAALRDGTPVAIKVQKPEVAAQVRSDLDVLKSFATAADRLTGIGRRVRFADWLGEFGKTLRAELNYEDEAETLLRFGQHLKPFPLLWVPQPVWDLSSREVLTMQLAEGVRVDRISGLRRTEQPMDKLAAELVKGYLDQMFVHGEIHADPHPGNLRVLQDGRLAIFDLGMVAHVPPRLRERLLKLLFAAVDGRGEEVAEETIALSTRLEDYDEDRHQRETGQMIARYAAHDTTSEGRIVLDLVRIATSNGLRTPPELSLLGKTLLNLEGVCRALSPTLDTRRVVERHLQHVMRARLKKSLSAANLASEAMELQHLVREGPRRMSEILSLAAENRLQMRVTGLEESHLMESLQKIANRVAAGIVTAALIMASAQMMRIETGLQLWGYPAIALALFLLGVVLGLGIVLSALLFDRRVRAREERGHR
SIO_010081: PD885_RS01890
subclass of: SO_0000673
so part of: PD885_RS01890
location: complement(408575..410299)
location: region:408575-410299:-1
so has part: feature:408575-410299:-1:exon

WP_002804552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408575-410299:-1:exon

PD885_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01895
old locus tag: PD885_00373
so part of: sequence
location: 410542..411480
location: region:410542-411480:1
so has part: feature:410542-411480:1:exon
subclass of: SO_0000010

61892838
type: Gene
SIO_000068: ncbigene

position:410542:1
position: 410542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411480:1
position: 411480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410542-411480:1:exon

PD885_RS01895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01895
old locus tag: PD885_00373
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005928381.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF808 domain-containing protein
translation: MAGASLFTLLDDIAALLDDVSVLTKVAAKKTAGVLGDDLALNAQQVTGVSADRELPVVWAVAKGSLVNKVILVPAALAISALEAWLSGRGYSVPLVMPLMMIGGAYLCFEGVEKLAHKAMHDEEEQAQRHAERTRALADQNVDLVALEKDKVKGAIRTDFILSAEIIVLSLGVVAGVSFGQQIAVLVAIALAMTIGVYGLVAAIVKLDDLGLYLAKKGAALAAFGRGILVAAPWLMKFLSVAGTLAMFLVGGGILVHNIPALHHLAVDLATSSGSLGWLVEALSNMSVGVVAGALVLGAVTLFQKLRGKKPH
SIO_010081: PD885_RS01895
subclass of: SO_0000673
so part of: PD885_RS01895
location: 410542..411480
location: region:410542-411480:1
so has part: feature:410542-411480:1:exon

WP_002804553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410542-411480:1:exon

PD885_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01900
old locus tag: PD885_00374
so part of: sequence
location: 411939..413252
location: region:411939-413252:1
so has part: feature:411939-413252:1:exon
subclass of: SO_0000010

61892839
type: Gene
SIO_000068: ncbigene

position:411939:1
position: 411939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413252:1
position: 413252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411939-413252:1:exon

PD885_RS01900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01900
old locus tag: PD885_00374
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003474534.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 10 protein
translation: MRAPHEPTASSAGRYGIGRRRFLGLGSAAVAAGIVGSPACAAIPFVGQMRATWVTSAFNLDWPSAASVQIVDPAERVRVQQQELLAIVDQAQAMHLNTLVFQVKPCADALYRSRILPWSPVLTGVLGKHPGFDPLAFLLRHAHARGIHVHAWLNPYHVSTRLDQATLNAFTTASNDSPQSVYVRHPDWVGVAADRLMLNPGLPAVRRWICKVVAELVACYNVDGVQFDDYFYTESAQSPFDDAQTYATYGSGFADKGDWRRHNTYRLMREVAGTIRAIRPGVAFGVSPAGVWRNRQDDPLGSDTQAGGPAFDTVYADTRRWVREEIVDYIVPQIYWPLARQAVRYDTLARWWADTVRGRRVQLYIGMALYKVGTASALEPDWTVDGGVPEIARQLDVNASLPEVGGCMLFRQGFLAATQTQQVVDYLKLRWQDPSRN
SIO_010081: PD885_RS01900
subclass of: SO_0000673
so part of: PD885_RS01900
location: 411939..413252
location: region:411939-413252:1
so has part: feature:411939-413252:1:exon

WP_162138779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411939-413252:1:exon

PD885_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01905
old locus tag: PD885_00375
so part of: sequence
location: complement(413357..414985)
location: region:413357-414985:-1
so has part: feature:413357-414985:-1:exon
subclass of: SO_0000010

61892840
type: Gene
SIO_000068: ncbigene

position:413357:-1
position: 413357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414985:-1
position: 414985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413357-414985:-1:exon

PD885_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01905
old locus tag: PD885_00375
EC number: 2.7.7.65
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014089156.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GGDEF domain-containing protein
translation: MADQPEHPSRPRSGLRRLLSWGGGDTARPAAAMPSVMNSGRDGQDLAAHQLVPAKAKSGTHDPAAATALLMHLFSHAAHPEALLLAFAEGITSLHGELGDMGGRLSAAYAAGDWPGYGRALRQLIDKYIRTVDIGDSLAEGRTEAEQLRDLLRHALGNALATLLQRSPELAAEAQTLASALRHWRPGLELITLEQRLRELSHQIGLCAEDASEQQNLLFGLFDLLLENVGELLDDRSWLQGQISVVRQLISGPLDVSSIEQARGTLRGVIYKQGVLKQGIADSKTAMREMMVSFVDRLDGMATSTGEYHDRVAGYSQAIGDARGIPDLNRLLQDLLQDTAGVQAQALAARDELLSARRQVEESEQRIASLQQELKDVAGLVREDQLTSALNRRGFEELFQREAVRTQRSGQPLCVAMLDLDDFRRLNETHGHAGGDAALRHTVDVAKAVLRTTDAIARFGGEEFVLLLPDSTIFEASAAVIRLQRALSQRSLLYDDARVFISFSAGVALRHIDEAQDELIRRADRAMYDAKAAGKNRVISAD
SIO_010081: PD885_RS01905
subclass of: SO_0000673
so part of: PD885_RS01905
location: complement(413357..414985)
location: region:413357-414985:-1
so has part: feature:413357-414985:-1:exon

WP_002804557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:413357-414985:-1:exon

PD885_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: glgA
locus tag: PD885_RS01910
old locus tag: PD885_00376
so part of: sequence
location: 415476..417059
location: region:415476-417059:1
so has part: feature:415476-417059:1:exon
subclass of: SO_0000010

61892841
type: Gene
SIO_000068: ncbigene

position:415476:1
position: 415476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417059:1
position: 417059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415476-417059:1:exon

PD885_RS01910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: glgA
locus tag: PD885_RS01910
old locus tag: PD885_00376
EC number: 2.4.1.21
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008575489.1
GO function: GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycogen synthase GlgA
translation: MVATMPLHATTARLERSTMLPTLNKSGRPRDARGRFIRHHERLPVSLADTRGALFVVSEMADFIKAGGLGDVAAALPRALRHRYDVRVLIPGYRAVLERAGKVEIVGRVLAHAALPACDIGRIVQSDGLPIYILLSKELFERDGSPYVSTSGSEFEDNAIRFATLSHAAAQIAAGHAGLGWKPRLLHLNDWPCALAAAYVRWSGGTTPCLLTIHNLAYQGLVPYSMAAALGIPAEHVADLEFYGQMSFLRGGIVNADHVNTVSVSYAKQIIGPAQGCGLDRLLAARAAKGTLTGIVNGIDASWDPRTDQYLDSHFSVNQWHGRQANAAQVRKAFGLRESTGPLFAVVSRLVHQKGLDLICEVAPQIVAAGGQIAVIGGGEPEIEQRVAELTRRYPGQVGAFIGFEEGLARRMFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQHASVEALRRCLERAFRTFRLPSLLAAMRRAAMLRPSGWDVAGKKYLSLYERTAATAPAFATVS
SIO_010081: PD885_RS01910
subclass of: SO_0000673
so part of: PD885_RS01910
location: 415476..417059
location: region:415476-417059:1
so has part: feature:415476-417059:1:exon

WP_040762358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415476-417059:1:exon

PD885_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01915
old locus tag: PD885_00377
so part of: sequence
location: 417056..419287
location: region:417056-419287:1
so has part: feature:417056-419287:1:exon
subclass of: SO_0000010

61892842
type: Gene
SIO_000068: ncbigene

position:417056:1
position: 417056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419287:1
position: 419287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417056-419287:1:exon

PD885_RS01915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01915
old locus tag: PD885_00377
EC number: 2.4.1.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017161584.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1,4-alpha-glucan branching enzyme
translation: MSERLGVQGRDTEADGGTTADMSEISQTLQALADGLPADAFAVLGPHPQADGRRHVCVLAPGAEAMGLIDPRGKLLARMQASPIEGVFEGTLAVEGPYRLRIVWPDVVQEIEDPYAFAASLDESTFLQIAAGDGQALRSALGAQHLRCNGVPGVRFAVWAPHAQRVAVVGDFNGWDVRRHPMGQRIGGFWELFLPRVEAGARYKYAVTAADGRILLKADPVARQSELPPATASVVPGAAAFAWTDAAWMANRDASAVPAPLSIYEVHAASWRRDEHNQPLDWPTLAEQLISYVQQLGFTHIELLPITEHPFGGSWGYQPLGLYAPTARHGSPDGFAQFVDACHRAGIGVILDWVSAHFPDDAHGLAQFDGGALYEHADPREGRHRDWNTLIYNYGRPEVTAYLMGSALEWIDHYHLDGLRVDAVASMLYRDYGRAEGEWLPNAHGGRENLEAVAFLRQLNHKIAARFPGVMTIAEESTAWPGVTAPIGDGGLGFTHKWNMGWMHDTLSYMQRDPVERAQHHSQLTFGLVYAFSERFVLPMSHDEVVHGTGGLLGQMPGDDWRRFANLRAYLALMWAHPGDKLLFMGAEFGQWSDWNHDQSLDWHLLDGAPHRGVQQLVGDLNAALRRVPALYRGTHRADGFDWSVADDARNSVLAFIRYDPDGGAPLLVVSNLTPQPHHDYRVGVPRAGNWREILNTDSAHYGGSNLGNSGRLATEPMGMYGHAQRLRLTLPPLATTYLQAEK
SIO_010081: PD885_RS01915
subclass of: SO_0000673
so part of: PD885_RS01915
location: 417056..419287
location: region:417056-419287:1
so has part: feature:417056-419287:1:exon

WP_002804560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417056-419287:1:exon

PD885_RS01920
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: treZ
locus tag: PD885_RS01920
old locus tag: PD885_00378
so part of: sequence
location: 419290..421047
location: region:419290-421047:1
so has part: feature:419290-421047:1:exon
subclass of: SO_0000010

61892843
type: Gene
SIO_000068: ncbigene

position:419290:1
position: 419290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421047:1
position: 421047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419290-421047:1:exon

PD885_RS01920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: treZ
locus tag: PD885_RS01920
old locus tag: PD885_00378
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017156528.1
GO function: GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
GO process: GO:0005992 - trehalose biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: malto-oligosyltrehalose trehalohydrolase
translation: MNERNVTTPAWGAWPAGEGQVRFALWAPDANSVDVVFDDAARVALQAGQDGFFSAVIDCAADARYRYSVDGGEPVPDPASRWQPDGVHGSSAVQRTDGYRWNNTQWQGRPWDEAVIYELHVGTCGGYAGVQAQLPQLAAMGITAIELMPLSAFPGAHNWGYDGVLPYAPVQAYGTPDELKALIDAAHGHGLMVLLDVVYNHFGPDGNYLHSYAAAFFNEDKPTPWGAAIDFRKLPVQRYFLDNALMWLHEYGLDGLRMDAVHAISPNAFLDILRETVEASRPPGRHVHLVLENEANQASQLQLGYTAQWDDDFHNALHVLLTGEEEGYYAAFADQPTQHLARVLGEGFAYQGQLDPRGHVRGEPSGALPPYKFVVFAQNHDQIGNRARGERLSVLVSQQRLRAALALTALTPMIPLFFMGEPWGAKQPFLFFTDFGPPLDDAVREGRRREFSHFAAFADEAQRATIPDPNSQATFAASRSPIDDAAHGDGAQWTAWFTALLAVRRQWLVPGLAQARAVRASVLADGAVTATWELPDGLWHIAFNVGKVAVPLPPLRGCVAHAENVDADAQQLPVDGFIAWHEDRA
SIO_010081: PD885_RS01920
subclass of: SO_0000673
so part of: PD885_RS01920
location: 419290..421047
location: region:419290-421047:1
so has part: feature:419290-421047:1:exon

WP_002804561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419290-421047:1:exon

PD885_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: malQ
locus tag: PD885_RS01925
old locus tag: PD885_00379
so part of: sequence
location: 421044..422978
location: region:421044-422978:1
so has part: feature:421044-422978:1:exon
subclass of: SO_0000010

61892844
type: Gene
SIO_000068: ncbigene

position:421044:1
position: 421044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422978:1
position: 422978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421044-422978:1:exon

PD885_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: malQ
locus tag: PD885_RS01925
old locus tag: PD885_00379
EC number: 2.4.1.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014509262.1
GO function: GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO process: GO:0005980 - glycogen catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-alpha-glucanotransferase
translation: MSADALHALAAAAGVMVDWVDASDQPRQVSEQSIHAVLTALELPAATAAQCEDSLRRRKAQAAEPVPLLTVQVSERLPLRVAADASGRWTDDSGASEQARADAQGQLRAPQRYGYWTLQIGNVVQQVAVAPQRCFSVADACGQPSPRAWGMALQVYSARSPDDGGIGDAAGTVEWLRQAALAGADALALSPVHASRPVTGAYSPYSPSDRRFLDPLHAAPVRIIGELALDAINEVPGLRERFDTLHTGALIDWPASAQAKWALLRHLYTRVPSDHADLVAFRTQAGNALDGFARFAAQDFGDNDPQLHVFTQWLAARSWSDAQREAHQRGMKIGLIADLAVGFDPNGAEAAAAADTVLRGLVLGAPPDAFNADGQHWGIGAYSPTALRRSGYAPYIALLRAVLRDRGGIRIDHILGLMRLWVVPEGASSNEGAYLAYPLHDLLNLLALESWRHRAIVIGEDLGVVPPGIREELSRRGVMGIDVLMFTRDEDGAFVSPALWRPDAIATTTTHDLPTLTGWRQGRDIAWRRKLELIQPDQATDDAKARTKDLARLDAAVERAGLTSADDPLLGALRFIATSISPLALLPVEDALALEEQPNLPGTVEVHPNWRRRLPDPLPHARLSTALQGVAEARRVAAVSEPHP
SIO_010081: PD885_RS01925
subclass of: SO_0000673
so part of: PD885_RS01925
location: 421044..422978
location: region:421044-422978:1
so has part: feature:421044-422978:1:exon

WP_002804562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421044-422978:1:exon

PD885_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: treY
locus tag: PD885_RS01930
old locus tag: PD885_00380
so part of: sequence
location: 422975..425578
location: region:422975-425578:1
so has part: feature:422975-425578:1:exon
subclass of: SO_0000010

61892845
type: Gene
SIO_000068: ncbigene

position:422975:1
position: 422975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425578:1
position: 425578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422975-425578:1:exon

PD885_RS01930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: treY
locus tag: PD885_RS01930
old locus tag: PD885_00380
EC number: 5.4.99.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006449755.1
GO function: GO:0047470 - (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity [Evidence IEA]
GO process: GO:0005992 - trehalose biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: malto-oligosyltrehalose synthase
translation: MIDLRATARLQLHAGFTLHAALAQVPYYAGLGISHLYLSPIGTAVPGSTHGYDNIDPTVVNPELGGEAALIALSQAVREHGMGLIADIVPNHMATHAQNAWWWDVLRNGRSAKHADWFDIDWRAPGRDGKLWLAVLDRPYATALAEGLITLVVEDDGSAALAHYDQRYPIRLQTLEIPETSARAQWLRDYNDGAKRGDGRLHKLIERQPYRLNWWRVGNDMLNYRRFFDITSLVALRVELPAVFDAVHALPLRLVAEGHLDGLRIDHVDGLTDPTGYVRKLRSRLDAAGRTRGLKPGTLGLYLEKILAPGEHLPADWPCDGTTGYDFMDQVGGLLHDATGFKPLARAWQRVSGRSGDFAQEERAARDEMLRGPLQTEFNRAVGALSALARLEPPTREFSPQMLARGLCVLLRWFPMYRTYAGAKGVAGSEAERLRATAARARESMPETIVAAVDAIERWLLDDAGADRAQIALRRILRRRVEQLSAPLNAKAVEDTAFYRHGVLLSRNEVGSHPTHFANEAAEFHAQNQERAKHYPRALLATATHDHKRGEDLRMRLAVLSEQPRWWIEQSTQFDALTETLESPALAGGDQQMLWQTLVAAWPIGLGADQPEPLAAYAERVWQWLLKAVREAKLHTSWTDGSPAYEHAVEATVEQVLCSRAGLPLRRALLRASNHIAAAGARNALVQTTLRLTVPGVPDLYQGTEGWDLSLVDPDNRRPVDYAQRQQWLEQARDWNTLLRSWRDGAVKARLTALLLQLRAEYPSLFAKGDYQPLNAAVRGDAQVLAFRRQYRGQSLVVAVTRLGAGDESDGDLPLLVPSATWGQASLALPEGTYRNVLDGSTLQPQRGRVAVSTLFARAPVAVLLTP
SIO_010081: PD885_RS01930
subclass of: SO_0000673
so part of: PD885_RS01930
location: 422975..425578
location: region:422975-425578:1
so has part: feature:422975-425578:1:exon

WP_002804563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422975-425578:1:exon

PD885_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01935
old locus tag: PD885_00381
so part of: sequence
location: 425592..425777
location: region:425592-425777:1
so has part: feature:425592-425777:1:exon
subclass of: SO_0000010

61892846
type: Gene
SIO_000068: ncbigene

position:425592:1
position: 425592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425777:1
position: 425777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425592-425777:1:exon

PD885_RS01935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01935
old locus tag: PD885_00381
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017158479.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2934 domain-containing protein
translation: MNDTERQARLRQLAQEIWEAEGRPDGHADRHWAMAERLVDAEERAAEQAAEHAVTPITARQ
SIO_010081: PD885_RS01935
subclass of: SO_0000673
so part of: PD885_RS01935
location: 425592..425777
location: region:425592-425777:1
so has part: feature:425592-425777:1:exon

WP_002804564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425592-425777:1:exon

PD885_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: glgX
locus tag: PD885_RS01940
old locus tag: PD885_00382
so part of: sequence
location: 426029..428191
location: region:426029-428191:1
so has part: feature:426029-428191:1:exon
subclass of: SO_0000010

61892847
type: Gene
SIO_000068: ncbigene

position:426029:1
position: 426029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428191:1
position: 428191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426029-428191:1:exon

PD885_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: glgX
locus tag: PD885_RS01940
old locus tag: PD885_00382
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010382022.1
GO function: GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO process: GO:0005980 - glycogen catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycogen debranching protein GlgX
translation: MATRKFTQRSRIREGRPNPLGATWDGLGVNFALYSRNATRVELCLFDERGREQERLVLPEYTDEVWHGYLPDARLGQLYGYRVHGPYAPDAGHRFNHNKLLLDPYAKQIVGELKWAPHLFGYTIGHRDKDLSFDRRDSAAFMPKSAVIDPAFTWGQDRPPQTPWNRTVIYEAHVRGLSMLHPAVPPENRGTFSALKTDELIDHISSLGVTAVELLPVHAFVDDQYLLEKGLRNYWGYNTLGFFAPQARYMSTRKVAEFKQMVARLHHAGLEVLLDVVYNHTAEGNELGPTLSFKGIDNASYYRLADDRRFYINDTGTGNTFDLTNAGALRMVMDSLRYWVQEMHVDGFRFDLASILGRERYGFDPSGSFLDAVRQDPVLSQTKLIAEPWDIGPGGYQVGNFPPGWVEWNDKFRDNVRAFWRGDGGQLAELATRLTGSADLFNHSGRRPTASVNFVTAHDGFTLRDLVSYAGKHNLANGEEGRDGSDHNISANYGVEGDTEDPTIKQLRRQQMRNLLATLLLSQGTPMLLAGDEFGHSQNGNNNAYCQDNALTWIDWTAVTKAAAADQAAFVRRLIRIRQRYPLLHRARFFDGKFDETLGLKDLTWLAPNGNEMDEAGWHDPEARALMLRLDGRAPATGLREIAANVTLLMLINAASISVSFTLPTMHDEHWRVLVDTARHGGRVVAGGSEWKAPAHSLTLLAVERDRIASSARIVSDGAR
SIO_010081: PD885_RS01940
subclass of: SO_0000673
so part of: PD885_RS01940
location: 426029..428191
location: region:426029-428191:1
so has part: feature:426029-428191:1:exon

WP_002804565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426029-428191:1:exon

PD885_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01945
old locus tag: PD885_00383
so part of: sequence
location: 428208..428840
location: region:428208-428840:1
so has part: feature:428208-428840:1:exon
subclass of: SO_0000010

61892848
type: Gene
SIO_000068: ncbigene

position:428208:1
position: 428208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428840:1
position: 428840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428208-428840:1:exon

PD885_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01945
old locus tag: PD885_00383
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019301281.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-binding protein
translation: MDVLLAGATGLVGKHVLQQLLADTRCTGVVAITRRPLTQFHPKLRNQVIDFDRLDSWTAPRMEAAICALGSTMKQAGSREVFYRIDHDYPIALARAACAQGTSVFVLNSAARANAQSRIFYNRVKGELERDLRTVGFPSLTFVRPGLIGGKREERRSGEHIASLVLGALAPVLPHRFRINPAAGIAAAIVKAALAPARGEHSVEAAELVE
SIO_010081: PD885_RS01945
subclass of: SO_0000673
so part of: PD885_RS01945
location: 428208..428840
location: region:428208-428840:1
so has part: feature:428208-428840:1:exon

WP_040762385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428208-428840:1:exon

PD885_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01950
old locus tag: PD885_00385
so part of: sequence
location: 428976..430120
location: region:428976-430120:1
so has part: feature:428976-430120:1:exon
subclass of: SO_0000010

61892849
type: Gene
SIO_000068: ncbigene

position:428976:1
position: 428976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430120:1
position: 430120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428976-430120:1:exon

PD885_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01950
old locus tag: PD885_00385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MSSKRYTDEFKIGAVRQVTDRGFKVAEVAERLGVTTHSLYAWLRKFGKPGVVQRAEVDQSAEVRRLKAELRRVTEERDIPKKGRRVLCQGVRAKYAFMQAHCGEFRVCAMCRVLRVNRSGYYAWLCSPNSERAKEDERLLGLIKHHWLASGSVYGHRKITRDLRDLGERCSRHRVHRLMRTEGLRAQVGYGRKPRFHGGMQCKAAANLLDRQFDVTEPDTAWASDFTFIRTHEGWMYLAVVIDLFSRQVVGWAMRDRADTELVVQALLSAVWRRKPNAGCLVHSDQGSVYTSDDWRSFLASHSVVCSMSRRGNCHDNAPVESFFGLLKRERIRRRTYSTKDAARAEVFDYIEMFYNPNRRHDSTGDLSPVEFERRYAQRGS
SIO_010081: PD885_RS01950
subclass of: SO_0000673
so part of: PD885_RS01950
location: join(428976..429213,429213..430120)
location: region:428976-430120:1
so has part: feature:428976-429213:1:exon
so has part: feature:429213-430120:1:exon

WP_088056617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428976-429213:1:exon

position:429213:1
position: 429213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:429213-430120:1:exon

PD885_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01955
old locus tag: PD885_00386
so part of: sequence
location: 430227..432131
location: region:430227-432131:1
so has part: feature:430227-432131:1:exon
subclass of: SO_0000010

61892850
type: Gene
SIO_000068: ncbigene

position:430227:1
position: 430227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432131:1
position: 432131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430227-432131:1:exon

PD885_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01955
old locus tag: PD885_00386
inference: COORDINATES: protein motif:HMM:TIGR03696.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RHS repeat-associated core domain-containing protein
translation: MARRAQIDPLGWRTDYAYDGSGRQTQIKAMAGTSEARTTTLVYNADGDVASMTDPLNRTTRFGYTACCLTSVTDPLGNVTNATCNAAGQRLTLTDALNHTTTFIWTGEDLTQISDPLERNVYFRYDVLGRMIAAQDVQGNLSRLEYDVLGRAVKSIDPLGNTVQTGFDANGNVAAILLPHGNGVTSTYDARDRRVTRTDALGQVERWTYDKMDRVTHYTDRRNRVTTYAYDALGRSTTTTFPGMGGSVTASYDAGNRMVALADSVSGTLGWSYDSFDQITAANSPQGTITYGYDAAGRRTKMQAATQAQVVYGYDTADRLTEITQGTEKVSFAYDPANRRITQTLPNHVQTAYTYNNANQVTGLAWGKAGQAALGSLGYGYNTVGQLVAQTGTHVPQSLPTASSGNSFDDNNRQTKANNVALSYDESGHLLNDGSRSYIWDDRDRLSKIQQSGTTIASFSYDALGRRTVKTEGGTSTQYLYDGQDPVQETQGSTVNPILTGLGIDQRYARNDTGGRTYFLTDHLGSTRLLTNAAGNVVQRYEYDPYGATTQSSTAYTNPYQYTGREKDLSGLYYYRARYYRPQWGRFISEDPIKLAGGVNGYIYVKDSPLQYNDPLERVMNFALVTLTYTDEAS
SIO_010081: PD885_RS01955
subclass of: SO_0000673
so part of: PD885_RS01955
location: 430227..432131
location: region:430227-432131:1
so has part: feature:430227-432131:1:exon

WP_231895764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430227-432131:1:exon

PD885_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01960
old locus tag: PD885_00387
so part of: sequence
location: 432118..432924
location: region:432118-432924:1
so has part: feature:432118-432924:1:exon
subclass of: SO_0000010

61892851
type: Gene
SIO_000068: ncbigene

position:432118:1
position: 432118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432924:1
position: 432924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432118-432924:1:exon

PD885_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01960
old locus tag: PD885_00387
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002801519.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MKPRKPYSTDISDEEWAFAAPYLTLMDVQAPQRKYELRAMFNALRWIARAGAPWRLLPNDFPPWEAVYQQTQRWLQAGCFEAMVSDLRSLLRVAQGKKGQPSAVIFDARTLQSTCESGPRAGYDGYKRKKGSKVHMAVDTLGHLLAVQVTPANEQERAQVRSLAQEVQHVTGETVKIAFVDQGYTGQEPAQAATEEGIELHVIKLQEAKKGFVLLPRRWVVERSFGWANRFRRLARDYERLPETLAGLHFVVFTILMLGNAATLFQSS
SIO_010081: PD885_RS01960
subclass of: SO_0000673
so part of: PD885_RS01960
location: 432118..432924
location: region:432118-432924:1
so has part: feature:432118-432924:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:432118-432924:1:exon

PD885_RS20325
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS20325
so part of: sequence
location: 432946..433335
location: region:432946-433335:1
so has part: feature:432946-433335:1:exon
subclass of: SO_0000010

61896318
type: Gene
SIO_000068: ncbigene

position:432946:1
position: 432946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433335:1
position: 433335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432946-433335:1:exon

PD885_RS20325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS20325
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTISIFDFFGGALFFGKDENSGGFIGIRAGVGIGGGISFEPLGNASGSNPCSNGGFGLGGYGEVGFHALFIQAGIELYGGGKWTPSDKSKLTPYGDFQPSGSLGDSGGINAEASAGVELTLHGGRPYRH
SIO_010081: PD885_RS20325
subclass of: SO_0000673
so part of: PD885_RS20325
location: 432946..433335
location: region:432946-433335:1
so has part: feature:432946-433335:1:exon

WP_108772804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432946-433335:1:exon

PD885_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01965
old locus tag: PD885_00388
so part of: sequence
location: complement(433772..435139)
location: region:433772-435139:-1
so has part: feature:433772-435139:-1:exon
subclass of: SO_0000010

61892852
type: Gene
SIO_000068: ncbigene

position:433772:-1
position: 433772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435139:-1
position: 435139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433772-435139:-1:exon

PD885_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01965
old locus tag: PD885_00388
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011035783.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MRTRRPAAEDRPAAELFRSWLENQIDLRHPLARLRQRMPWTALEQALSSRLPATQAGGGRPALPVRLIAGLLYLKHAYDLSDEAVCERWLENPYWQFFTGEVVFQTRLPCDASSLTRWRQRLGEAGMEELLAHTINAAHAMQAVDARELSRVIVDTTVQEKAIAYPTDSRLLEVARKKLVLLAKRHSIGLRQSYARQGPALSRKAGRYAHACQFKRMRRVLRRQRTVLGRLVRDIQRKLDQVNTGVRERIAVWLERAQRLYTQRPKDKQKLYALHAPEVECIGKGKARQAYEFGVKVGIAVTACKGLVVGARSFPGNPYDGDTLAEQLEQTRGLLQDVSVEPTVAIVDLGDRGREVDGVQVLHRGKAKTLTRRQWRWIKRRQAVEPVIGHLKDDCRLRRCRLKGAQGDALHVLGCAAGYNLRWLLRWIAFLRAWMRAMGWSSLSAVPLSPTALGA
SIO_010081: PD885_RS01965
subclass of: SO_0000673
so part of: PD885_RS01965
location: complement(433772..435139)
location: region:433772-435139:-1
so has part: feature:433772-435139:-1:exon

WP_088056618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433772-435139:-1:exon

PD885_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01970
old locus tag: PD885_00389
pseudo: true
so part of: sequence
location: 435283..436374
location: region:435283-436374:1
so has part: feature:435283-436374:1:exon
subclass of: SO_0000010

61892853
type: Gene
SIO_000068: ncbigene

position:435283:1
position: 435283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436374:1
position: 436374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435283-436374:1:exon

PD885_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01970
old locus tag: PD885_00389
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: PD885_RS01970
subclass of: SO_0000673
so part of: PD885_RS01970
location: 435283..436374
location: region:435283-436374:1
so has part: feature:435283-436374:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:435283-436374:1:exon

PD885_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01975
so part of: sequence
location: 436580..436655
location: region:436580-436655:1
so has part: feature:436580-436655:1:exon
subclass of: SO_0000011

61892854
type: Gene
SIO_000068: ncbigene

position:436580:1
position: 436580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436655:1
position: 436655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436580-436655:1:exon

PD885_RS01975
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 48664
nc RNA class: other
locus tag: PD885_RS01975
product: sX9 sRNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02228
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: PD885_RS01975
subclass of: SO_0000673
so part of: PD885_RS01975
location: 436580..436655
location: region:436580-436655:1
so has part: feature:436580-436655:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:436580-436655:1:exon

PD885_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01980
old locus tag: PD885_00391
so part of: sequence
location: complement(436745..439078)
location: region:436745-439078:-1
so has part: feature:436745-439078:-1:exon
subclass of: SO_0000010

61892855
type: Gene
SIO_000068: ncbigene

position:436745:-1
position: 436745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439078:-1
position: 439078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436745-439078:-1:exon

PD885_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01980
old locus tag: PD885_00391
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011346209.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein-disulfide reductase DsbD
translation: MKSLSRWIARCALLTAPLFVAPPPAQAAVTEADLLPVDQAFTPSATANSRESIALSWKIAPGYYLYRHRISVKSGQGFTAGELALPEGESKHDEFFGQVQIYRKQLQATLAGKAEPSLQTAVLQVQYQGCADAGVCYPPQRREIRVSLPNAQGGGAAARASAATSNLGQQRENLGALVPRAPAGPRLFGSPGRAAGVDALPLPAEQAFTFEAIVGDGNRLLLRFTPAPGYYIYRDRTSLALEGVGGVRTGLPRWPQGESHRDKHFGDVVVYFGQAEVTLPLLRDHADPAHVTLVATFQGCQTDGICYPPMTRRVALDLPAGTVSPQNQAQAAPLMISPLAAGQAPTEPAPVPTRGTNANLAADASADNPQRTQPPHTDKGLLAMLALALLGGLVLNLMPCVLPILSLKVLGLAHSGESRGHARSHAIWYSLGVLVSFAAIGGLVIGLRAAGQAAGWGFQLQQPWFVAALAYLMFAVGLSLSGVFTLGSNLGGIGQSLAARNGPLGDFFTGVLACVVASPCIAPFMGTALAYAFTAPALLAMLVFLALGLGLALPFLLIGFIPSLARRLPTPGAWMETLKQVLAFPMYLTAIWLLWVLGKQRGVDALALMLVGATLLALGLWCFERSRWKSNRLGMRLASVMLVLTLVPVIAVTRLSLPVTTAAEGVVAFSPQLLDRLRADNRVVFVNMTADWCVTCKANEKNVLSGADFRDALRRVDAVYMKGDWTNVDPKISTFLDQHQAVGVPLYVVYGPGAPPAVLPTVLTNAITEDALLRAAR
SIO_010081: PD885_RS01980
subclass of: SO_0000673
so part of: PD885_RS01980
location: complement(436745..439078)
location: region:436745-439078:-1
so has part: feature:436745-439078:-1:exon

WP_088056619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436745-439078:-1:exon

PD885_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01985
old locus tag: PD885_00392
so part of: sequence
location: complement(439084..439416)
location: region:439084-439416:-1
so has part: feature:439084-439416:-1:exon
subclass of: SO_0000010

61892856
type: Gene
SIO_000068: ncbigene

position:439084:-1
position: 439084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439416:-1
position: 439416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439084-439416:-1:exon

PD885_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01985
old locus tag: PD885_00392
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010368153.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: divalent-cation tolerance protein CutA
translation: MNASPLHLLFSTCPDADSADHIAHALLDERLAACVTQLPGAQSLYRWNGAIERSQEVQLLIKTCEDRLHDAIARLQALHPYELPEAVAVQASAGLSAYLDWVRAETRKES
SIO_010081: PD885_RS01985
subclass of: SO_0000673
so part of: PD885_RS01985
location: complement(439084..439416)
location: region:439084-439416:-1
so has part: feature:439084-439416:-1:exon

WP_002804280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439084-439416:-1:exon

PD885_RS20330
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS20330
old locus tag: PD885_00393
so part of: sequence
location: 439614..440033
location: region:439614-440033:1
so has part: feature:439614-440033:1:exon
subclass of: SO_0000010

61896319
type: Gene
SIO_000068: ncbigene

position:439614:1
position: 439614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440033:1
position: 440033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439614-440033:1:exon

PD885_RS20330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS20330
old locus tag: PD885_00393
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAQAQSDRDVGGQALAMSARICPAHSTERTRPAVRTLPVGALRVLVQRDGHAMPGPVFARRDTGGVVRPSRGARLKSRCAQRGEATDHKVGVMTRSEEFHTATVVWDANGEPAKNVAVPAFEPRARPVGRYAEPAVPTH
SIO_010081: PD885_RS20330
subclass of: SO_0000673
so part of: PD885_RS20330
location: 439614..440033
location: region:439614-440033:1
so has part: feature:439614-440033:1:exon

WP_108817064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439614-440033:1:exon

PD885_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS01995
old locus tag: PD885_00395
pseudo: true
so part of: sequence
location: complement(440109..441791)
location: region:440109-441791:-1
so has part: feature:440109-441791:-1:exon
subclass of: SO_0000010

61892857
type: Gene
SIO_000068: ncbigene

position:440109:-1
position: 440109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441791:-1
position: 441791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440109-441791:-1:exon

PD885_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS01995
old locus tag: PD885_00395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017161135.1
GO function: GO:0004518 - nuclease activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: endonuclease
SIO_010081: PD885_RS01995
subclass of: SO_0000673
so part of: PD885_RS01995
location: complement(440109..441791)
location: region:440109-441791:-1
so has part: feature:440109-441791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440109-441791:-1:exon

PD885_RS21260
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21260
so part of: sequence
location: 441694..442059
location: region:441694-442059:1
so has part: feature:441694-442059:1:exon
subclass of: SO_0000010

61896436
type: Gene
SIO_000068: ncbigene

position:441694:1
position: 441694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442059:1
position: 442059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441694-442059:1:exon

PD885_RS21260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTVALAEVAVSASAQASGSQQLRATPPDVNLINSSFWSGNACLTLEPVHDKWWNLVPFLGRQQNGCAHRQAGTVGAVSRTKTISAERTMRIHPTTRPHGFGSLYGLRMQPSKRKNFALSP
SIO_010081: PD885_RS21260
subclass of: SO_0000673
so part of: PD885_RS21260
location: 441694..442059
location: region:441694-442059:1
so has part: feature:441694-442059:1:exon

WP_002804277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441694-442059:1:exon

PD885_RS02000
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02000
old locus tag: PD885_00396
so part of: sequence
location: 442200..442487
location: region:442200-442487:1
so has part: feature:442200-442487:1:exon
subclass of: SO_0000010

61892858
type: Gene
SIO_000068: ncbigene

position:442200:1
position: 442200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442487:1
position: 442487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442200-442487:1:exon

PD885_RS02000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02000
old locus tag: PD885_00396
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019303525.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: co-chaperone GroES
translation: MSIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAVGAGKPLDNGSLRAPVVKVGDKVIYGQYAGSSYKAEGTEYKVLREDDILAVIG
SIO_010081: PD885_RS02000
subclass of: SO_0000673
so part of: PD885_RS02000
location: 442200..442487
location: region:442200-442487:1
so has part: feature:442200-442487:1:exon

WP_002804275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442200-442487:1:exon

PD885_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: groL
locus tag: PD885_RS02005
old locus tag: PD885_00397
so part of: sequence
location: 442629..444269
location: region:442629-444269:1
so has part: feature:442629-444269:1:exon
subclass of: SO_0000010

61892859
type: Gene
SIO_000068: ncbigene

position:442629:1
position: 442629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444269:1
position: 444269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442629-444269:1:exon

PD885_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: groL
locus tag: PD885_RS02005
old locus tag: PD885_00397
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005411226.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chaperonin GroEL
translation: MAAKDIRFGEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASKTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGIDQAVKAAVIELKNISKPTTDDKAIAQVGTISANSDESIGNIIAEAMQKVGKEGVITVEEGSGLENELDVVEGMQFDRGYLSPYFINNQQSQSADLDDPFILLHDKKISNVRDLLPVLEGVAKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVVAVKAPGFGDRRKAMLEDMAVLTGGTVISEEVGLALEKATIKDLGRAKKVQVSKENTTIIDGAGDSATIQARVGQIKTQIEDTSSDYDREKLQERVAKLAGGVAVIKVGASTEIEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALVAVGNLTGANEDQTHGIQIALRAMEAPLREIVANAGEEPSVILNKVKEGTGNYGYNAANGEFGDMVEFGILDPTKVTRSALQNAASIAGLMITTEAMVADAPKKDEPALPSGGGMGGMGGMDF
SIO_010081: PD885_RS02005
subclass of: SO_0000673
so part of: PD885_RS02005
location: 442629..444269
location: region:442629-444269:1
so has part: feature:442629-444269:1:exon

WP_002804273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442629-444269:1:exon

PD885_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02010
pseudo: true
so part of: sequence
location: <444467..444862
location: region:444467-444862:1
so has part: feature:444467-444862:1:exon
subclass of: SO_0000010

61892860
type: Gene
SIO_000068: ncbigene

position:444467:1
position: 444467
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:444862:1
position: 444862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444467-444862:1:exon

PD885_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611069.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS4 family transposase
SIO_010081: PD885_RS02010
subclass of: SO_0000673
so part of: PD885_RS02010
location: <444467..444862
location: region:444467-444862:1
so has part: feature:444467-444862:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:444467-444862:1:exon

PD885_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: xopX
locus tag: PD885_RS02015
old locus tag: PD885_00398
so part of: sequence
location: complement(444949..447084)
location: region:444949-447084:-1
so has part: feature:444949-447084:-1:exon
subclass of: SO_0000010

61892861
type: Gene
SIO_000068: ncbigene

position:444949:-1
position: 444949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447084:-1
position: 447084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444949-447084:-1:exon

PD885_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: xopX
locus tag: PD885_RS02015
old locus tag: PD885_00398
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006451549.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XopX family type III secretion system effector
translation: MKINEAKVAGPSSSSVLQEVRDDQEQTVALQPPSTLPQTSVDPALAPLAARNRPGASPAGSASASSRSASPAEPSSPAPRARHSARTTASSIAATLASRANSALATGVQQASAAVSKAASNLWSLTDLRTMLQMHADDPAFLRMMRHTDPEQVAPHSLAACRQQITELRQTIAPLDNGLEPRFRQQLLADIKAVEDALQPLEHGTPAARRALNSLVNLVNLWPIAVPSPLLGKQAKTFAYTVAASTKNVLSISASALRPTADGLPFPLMGGELGREANEMHFYSILLKGIFLSTELPKKFGNPSVQRQAEAMENNVGFAAAASTACAALILTPFFWNSLNAMGNRLHSGASKMSAKAMQTLGYGSQAEQLRKQLTPGQISGQLRGQLNEICAALETGHDAFQQARRNFAGPGAGHELTRTLNAQCTHLLETLDQCSKRLSTALQLDQSQPAASPRQATNHDFSSKLALTLLGAGVTGLTVYLIQPDRIGTVELMADSAILTTVMMQSALNKQATRQDAMERFKSMCSGSMVMALALGVEKLSKTFADKSLIESSSSSPYYAGAIMSLMSMTMPGPMARGAELAMNWGGQQVMRVFKGPDGTPLATRMPSSLEDLSQTVQSTARYVESLTSEQAQQYEQMVGDIALQVIEDAGAGATTQTRPSSVTLTEITEVAEMDDNSEVAMQTASPEPAAPAQPHPSNDDATTSTARSP
SIO_010081: PD885_RS02015
subclass of: SO_0000673
so part of: PD885_RS02015
location: complement(444949..447084)
location: region:444949-447084:-1
so has part: feature:444949-447084:-1:exon

WP_065975441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444949-447084:-1:exon

PD885_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: xopX
locus tag: PD885_RS02020
old locus tag: PD885_00399
so part of: sequence
location: complement(447344..449464)
location: region:447344-449464:-1
so has part: feature:447344-449464:-1:exon
subclass of: SO_0000010

61892862
type: Gene
SIO_000068: ncbigene

position:447344:-1
position: 447344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449464:-1
position: 449464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447344-449464:-1:exon

PD885_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: xopX
locus tag: PD885_RS02020
old locus tag: PD885_00399
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002804265.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XopX family type III secretion system effector
translation: MKINEAKVAGPSSSSVLQEVRDDQEQTVALRPPSTLPQTSVDPALAPLAARNRPGASPAGSASASSRSASPAEPSSPAPRARHSARTTASSIAATLASRANSALATGAQQASAAVSKAASNLWSLTDLRTMLQMHADDPAFLRMMRHTDPEQVAPHSLAACRQQITELRQTIAPLDNGLEPRFRQQLLADIKAVEDALQPLEHGTPAARRALNSLVNLVNVWPVAVPSPLLGNLGKTFAYTIAYVTRNAVSISASALRPTADGLPFPLMGGQLGREANEMHFYATLLNGLFLATELPKKFGNPSVQHQAEAVENNLGFAATAATACAALVLTPFFWNNINAMGNRLHSGASELGAKAMQTLGYGPQAERLRTRLTPGQISDQLRGQLNTICAALESGRDAFQQARRKFTGPGAGHELTRTLNAQCTHLLETLDQCSKRLNTALQHDQRQSATIPRQVTNQDFSSKLALALFGAGVTGLTVYLIQPDRIGTVDLLADSAVVTTVMMQSALNKQATHQDAMERFKAMCSGSMVMALGLGVEKLSKIFANKSLIEASSSSPYYAGAVMSLMSMTMPGPIARGAELAMNWGGHQLMRVFKGPDGTPLATRMPSSPDELDETIENTLRYLEGLTEAELYAYRTIVAESTLQAIHDAGAGTQTRPSNVTISEITGMDDGAEVAMQTAAPEPAAPAQPHPSSDDATTSAARSP
SIO_010081: PD885_RS02020
subclass of: SO_0000673
so part of: PD885_RS02020
location: complement(447344..449464)
location: region:447344-449464:-1
so has part: feature:447344-449464:-1:exon

WP_065975440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447344-449464:-1:exon

PD885_RS02025
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02025
old locus tag: PD885_00400
pseudo: true
so part of: sequence
location: <449699..>449933
location: region:449699-449933:1
so has part: feature:449699-449933:1:exon
subclass of: SO_0000010

61892863
type: Gene
SIO_000068: ncbigene

position:449699:1
position: 449699
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:449933:1
position: 449933
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449699-449933:1:exon

PD885_RS02025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02025
old locus tag: PD885_00400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017158918.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: TonB-dependent receptor
SIO_010081: PD885_RS02025
subclass of: SO_0000673
so part of: PD885_RS02025
location: <449699..>449933
location: region:449699-449933:1
so has part: feature:449699-449933:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449699-449933:1:exon

PD885_RS20335
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS20335
so part of: sequence
location: 450275..450490
location: region:450275-450490:1
so has part: feature:450275-450490:1:exon
subclass of: SO_0000010

61896320
type: Gene
SIO_000068: ncbigene

position:450275:1
position: 450275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450490:1
position: 450490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450275-450490:1:exon

PD885_RS20335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS20335
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQWQRTHARVINATDERTPQPILFLVLRFSDAAGVGRIALNLKETSAAFPKSRQRITGGFFVAASPGSPT
SIO_010081: PD885_RS20335
subclass of: SO_0000673
so part of: PD885_RS20335
location: 450275..450490
location: region:450275-450490:1
so has part: feature:450275-450490:1:exon

WP_134656574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450275-450490:1:exon

PD885_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02030
old locus tag: PD885_00401
so part of: sequence
location: 450513..451586
location: region:450513-451586:1
so has part: feature:450513-451586:1:exon
subclass of: SO_0000010

61892864
type: Gene
SIO_000068: ncbigene

position:450513:1
position: 450513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451586:1
position: 451586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450513-451586:1:exon

PD885_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02030
old locus tag: PD885_00401
EC number: 2.5.1.54
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014089228.1
GO function: GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-deoxy-7-phosphoheptulonate synthase
translation: MPPVTDDLRIRKIDAVVPPSQLLSLLPCDEGASETVTNSRAALHEILHRRDDRLAVVIGPCSIHDPVAAMDYAHRLRPLREQLGDALEIVMRVYFEKPRTTMGWKGLINDPDLDGSFQINKGLRLARSLLRDINNLGLPAGVEFLDIISPQYIADLVAWGAIGARTTESQVHREMASGLSCPVGFKNGTDGDVKIAVDAVGAASHPHHFLAVTKDGHTAVAATAGNPDCHVILRGGKQPNFDATNVEAASQLLKKSGLPVRLMIDASHANSGKNPENQPKVIDDIASQLEGGETRIVGVMVESHLVGGRQELVPGCELTYGQSITDGCLDWDASVQVLERLATAVRARRARRIAEAA
SIO_010081: PD885_RS02030
subclass of: SO_0000673
so part of: PD885_RS02030
location: 450513..451586
location: region:450513-451586:1
so has part: feature:450513-451586:1:exon

WP_002804263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450513-451586:1:exon

PD885_RS02035
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02035
so part of: sequence
location: 451867..451942
location: region:451867-451942:1
so has part: feature:451867-451942:1:exon
subclass of: SO_0000011

61892865
type: Gene
SIO_000068: ncbigene

position:451867:1
position: 451867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451942:1
position: 451942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451867-451942:1:exon

PD885_RS02035
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 48664
nc RNA class: other
locus tag: PD885_RS02035
product: sX9 sRNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02228
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: PD885_RS02035
subclass of: SO_0000673
so part of: PD885_RS02035
location: 451867..451942
location: region:451867-451942:1
so has part: feature:451867-451942:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:451867-451942:1:exon

PD885_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02040
old locus tag: PD885_00402
so part of: sequence
location: complement(451964..453478)
location: region:451964-453478:-1
so has part: feature:451964-453478:-1:exon
subclass of: SO_0000010

61892866
type: Gene
SIO_000068: ncbigene

position:451964:-1
position: 451964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453478:-1
position: 453478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451964-453478:-1:exon

PD885_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02040
old locus tag: PD885_00402
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019662193.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA hydrolase/transferase family protein
translation: MSNERILHAPLRDRLVSAEAAAALIQPGETVAMSGFTGSGYPKAVPMALAQRIEAAHLQGQPFQIKLMTGASTAPELDGALAKADGIAMRMPFQSDPDARQRINAGTLDYIDIHLSHVAQHVWFGFYGQIDTAVVEVSAIRADGSLVPSTSIGNNKTWLDLARKVIIEVNDWQPAGLDGMHDVYYGTALPPQRKPIPLLHGDDRIGEPSLRCDPDKIVAVVRTHGPDRNSPFAAADESSERIAEHLIAFLRHEVGKGRLPANLLPLQSGVGNTPNAVLAGLARSGFRDLEAFTEVIQDGMLALLRDGVLRYASCTGFALSPEGNEELKRNIEFYRQRIVMRTQEISNHPELVRRLGCIGMNGMIEADLYGNVNSTHVMGSRIMNGIGGSGDFARNGFLSIFLSPSIAKAGSISSIVPMVSHVDHTEHDVSVIVTEQGLADLRGLTPKQRAHQLLAHCVHPRYRDTLDDYVARANRHSYGKHTPHLLTEALTWHQRWLETGDMLG
SIO_010081: PD885_RS02040
subclass of: SO_0000673
so part of: PD885_RS02040
location: complement(451964..453478)
location: region:451964-453478:-1
so has part: feature:451964-453478:-1:exon

WP_002804262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451964-453478:-1:exon

PD885_RS02045
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02045
old locus tag: PD885_00403
so part of: sequence
location: 453710..455917
location: region:453710-455917:1
so has part: feature:453710-455917:1:exon
subclass of: SO_0000010

61892867
type: Gene
SIO_000068: ncbigene

position:453710:1
position: 453710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455917:1
position: 455917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453710-455917:1:exon

PD885_RS02045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02045
old locus tag: PD885_00403
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160243.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTMPVRARWRGLPRAVRWPVLALIAPYASYLLLGNLLLNTPLGPAALNRKPDTFAMHWGPGLTWWPGRLVLWDVDLQGHSTRNSWNVSAQRMSGQIRLLPLLHRQLLVPQLHARGVRGGMQAAVAIQAADSPARPPSTAPAWTLQFDRIIAEQVQALSLRQLHIEGDGQLQLGLFKQLRGGPMELFPSRAVFEKARVRWGKDEVMRNGQLRIEASIVRHAPDQARGLALLQITDALVAVHGDTAALDVTRNAQGRHTVATRAGKGRVDGELRWRRGTLQPGSQLQWRAPLHDSTRAPAAFLGELATQLQVEENMRLQVSMPEPADAGLTLDADLRVRGRQLPLQSMRSLLPRTSGHARLHWQLSSLSWIPALFPDVDWLTLEGDGLVDADLRIDRGQLGAGSRLQVPHVRAQVGVMGHTINGQATADLRVDADAKGQLLPALALQMQQFSIAHRDAPQRPFVQGRDLRLDLQTRADTHTLRTLRDATRAHLVFDNARVPDLRAYNRYLPQQQLRFDGGNGVLSGDLQIEPGGRIGKGGLRIGARAARLQFAGLALRGDVDADLRLQRGDLRAETFSLDASRIQLSNVGFTGPNGQRRDGWWARVVLENTRMQWRQPMAVDGRVRIQVRDLEFLMSLYARDSWIPNWMLQLMDAGQAQVTARVQWQGETVIVDRLQARNERFQVDARLRLQGTQRSGSLLARWGVLSAAVGLRNDTPQWHLLRAPEWYQAQPDLLR
SIO_010081: PD885_RS02045
subclass of: SO_0000673
so part of: PD885_RS02045
location: 453710..455917
location: region:453710-455917:1
so has part: feature:453710-455917:1:exon

WP_002804261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453710-455917:1:exon

PD885_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02050
old locus tag: PD885_00404
so part of: sequence
location: complement(456141..457058)
location: region:456141-457058:-1
so has part: feature:456141-457058:-1:exon
subclass of: SO_0000010

61892868
type: Gene
SIO_000068: ncbigene

position:456141:-1
position: 456141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457058:-1
position: 457058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456141-457058:-1:exon

PD885_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02050
old locus tag: PD885_00404
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005995312.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMP-30/gluconolactonase/LRE family protein
translation: MDSHCRVRPPGPAQPTDCAPPSTQHAALAARFGHARLHTLYDQATWSEGPAWWEAQRTLVWSDVVGRRVLGWREDGAVDVLLDATAFTNGNAVDTQQRLVHCEHGRRAITRSDTDGQAHLLVGRFEGKRLNSPNDLIVARDGAIWFTDPPFGLLKPSQGCPAPQQLDHHSVYRLPPDGGALQRMVSLDHPNGLAFSPDERVLYVSQTPEHAQGEPEITAFDWRDGALHDQRRFAVVPEGLADGFCVDRKGWLWSSFGAGVCVFDHHGQLLGLVPTPATASNCTFDQQRRRLFITGGNSLWLLELS
SIO_010081: PD885_RS02050
subclass of: SO_0000673
so part of: PD885_RS02050
location: complement(456141..457058)
location: region:456141-457058:-1
so has part: feature:456141-457058:-1:exon

WP_002804254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456141-457058:-1:exon

PD885_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02055
old locus tag: PD885_00405
so part of: sequence
location: complement(457058..457576)
location: region:457058-457576:-1
so has part: feature:457058-457576:-1:exon
subclass of: SO_0000010

61892869
type: Gene
SIO_000068: ncbigene

position:457576:-1
position: 457576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457058-457576:-1:exon

PD885_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02055
old locus tag: PD885_00405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005929373.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSPIILPAQVLPSQIPLDNDGTDLELPPSLPFLHLWTGPDGKSRLNPSQLPGFGSKSIGGGAAPQWLRPFPGEVLSVQFAVLPVGWVGDWHESPHPQWVIPLRGRWFIETGDGTRVEMGPGDIHFGQDQGTTDAHGHRSGQLGQTPCLQMLVQFAQSPGAATAHPFGHEAPQ
SIO_010081: PD885_RS02055
subclass of: SO_0000673
so part of: PD885_RS02055
location: complement(457058..457576)
location: region:457058-457576:-1
so has part: feature:457058-457576:-1:exon

WP_002804250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457058-457576:-1:exon

PD885_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: glnE
locus tag: PD885_RS02060
old locus tag: PD885_00406
so part of: sequence
location: 457740..460556
location: region:457740-460556:1
so has part: feature:457740-460556:1:exon
subclass of: SO_0000010

61892870
type: Gene
SIO_000068: ncbigene

position:457740:1
position: 457740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460556:1
position: 460556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457740-460556:1:exon

PD885_RS02060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: glnE
locus tag: PD885_RS02060
old locus tag: PD885_00406
EC number: 2.7.7.42
EC number: 2.7.7.89
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409641.1
GO function: GO:0008882 - [glutamate-ammonia-ligase] adenylyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
translation: MSQPIPSVSPALAALIERAVARVRHALPAGQRWPGGGFDRQLEQVALASEFALDTLARQPALVHHLAQADPPPLPVPVLDPAQPQLWPAQLRRYRSAESTRLVWRDVLDLDSVDATLAGATRLADNCLQCGLQALEQQFHTRHGHVIAEDGSVQQMVVFGLGKLGGGELNFSSDVDVVYAYPQGGQSDGARPLAAEEYFARLGQQLAKLLDETTADGFSHRVDLRLRPFGSAGRVALSFAGMDQYFQREGRDWERYAWLKARAVAGDIDAGEAWLETLRPFVYRRYLDFTALDGLREMKAAITAEVARHDRLDDIKRGPGGIREIEFLAQSLQVIRGGREPTLRERRLLPALQALVAAGQIDPDNGQALTEAYRFLRRLENRLQMLRDAQTHALPQAPLDRARIALGLGYADWSALLQALTPQRVRVAAEFAELLAPRVRAAAPDALADYWCALPDGDATPLAGIGLHDPGGAHQVLADFANASGVRALSDNARARLDRVMPALLHAATRASQPDAAVRRMLGLLQATLRRTSYLALLDEQPSALARVVDVLSRSALLAERLAAHPLLLDELLDTRISGPLPDRAALHAACAQMLHIDDTEAALRELNERRLALSFRIALATLDGRQQAVQSTQQLAWLAEAVVQTVLQLARSALVASHGQVPGGSFAIIGYGSLGGLELGFGSDLDLVFLYDHPRAVEASDGKRPLEAGRWFARLAQKVMALLAAETGAGSLYDIDVRLRPDGGKGALVSSLASYREYQRARAWTWEHQALVRARAVAGDVALCDAFAQVRADTLTRVRDPAQVHEDVHKMRARMRTELDRSDAGRLDLKQGAGGLVDLEFVLQAGVLGQAAQHRQLLLACDTPALIDALVQAHWLPGDSAAPLHQAHAALVEAGLSCTLDRRPRLIAPTPVVRDARLIVAAIADAQQLRFPPGKSL
SIO_010081: PD885_RS02060
subclass of: SO_0000673
so part of: PD885_RS02060
location: 457740..460556
location: region:457740-460556:1
so has part: feature:457740-460556:1:exon

WP_002804248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457740-460556:1:exon

PD885_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02065
old locus tag: PD885_00407
so part of: sequence
location: complement(460661..461167)
location: region:460661-461167:-1
so has part: feature:460661-461167:-1:exon
subclass of: SO_0000010

61892871
type: Gene
SIO_000068: ncbigene

position:460661:-1
position: 460661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461167:-1
position: 461167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460661-461167:-1:exon

PD885_RS02065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02065
old locus tag: PD885_00407
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005995323.1
GO process: GO:1990397 - queuosine salvage [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: queuosine precursor transporter
translation: MWAVLAMGAVVLVSNILVQYPINDWLTWGAFSYPVAFLVSNLINRRFGPRAARKVAWCGFALAVLLSIWLATPRIAVASCTAFIAAQLLDISVFDRLRNGSWWRAPIVATTCSATLDTAIFWSIAFAGVGLPWISWAAGDLAVKLGMGVFLLGPFRALLWRNAPRPSR
SIO_010081: PD885_RS02065
subclass of: SO_0000673
so part of: PD885_RS02065
location: complement(460661..461167)
location: region:460661-461167:-1
so has part: feature:460661-461167:-1:exon

WP_052032101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460661-461167:-1:exon

PD885_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02070
old locus tag: PD885_00408
so part of: sequence
location: complement(461350..462297)
location: region:461350-462297:-1
so has part: feature:461350-462297:-1:exon
subclass of: SO_0000010

61892872
type: Gene
SIO_000068: ncbigene

position:461350:-1
position: 461350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462297:-1
position: 462297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461350-462297:-1:exon

PD885_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02070
old locus tag: PD885_00408
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011038688.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ELM1/GtrOC1 family putative glycosyltransferase
translation: MALTCAVSDGLAGNARQAEALARALQPAPITALHLQARAPWRWAAPHLLPGADAAFGAEFARQLGQPPALAIGCGRQAALATRLLRAHGSRTVQILDPRLDARHWDLLIVPEHDALRGANVITLLGSLHPVDDTWLTAGRTAFATLGSLPGPRLALLIGGPSAPVPWTTQALATLCAHLREQLHSVGGSLLVTTSRRTPPETITTLRTLCADLPGLMWCDERDGPNPYAGLLGWADAIVATADSVNLLSEACATRVPVAAAFCDCARGRVRQYVRALQAHRRLCDTADIFAAQSELTPLRETQRVATLVRERMHI
SIO_010081: PD885_RS02070
subclass of: SO_0000673
so part of: PD885_RS02070
location: complement(461350..462297)
location: region:461350-462297:-1
so has part: feature:461350-462297:-1:exon

WP_002804243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461350-462297:-1:exon

PD885_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02075
old locus tag: PD885_00409
so part of: sequence
location: 462434..463024
location: region:462434-463024:1
so has part: feature:462434-463024:1:exon
subclass of: SO_0000010

61892873
type: Gene
SIO_000068: ncbigene

position:462434:1
position: 462434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463024:1
position: 463024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462434-463024:1:exon

PD885_RS02075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02075
old locus tag: PD885_00409
EC number: 1.1.1.298
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005914114.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: malonic semialdehyde reductase
translation: MSDLLNAAALDQLFRTARTQNTFLDKPVSEDQLRQLYDLVKWGPTAANGSPARFVFVTSPEAKQKLTPALSEGNAAKTLAAPVTVIIGSDEDFHEKLPYLFPHADAKSWFDGPREARVPSAFRNSSLQGAYLILAARALGLDAGPMSGFDNAKVDAAFFAGTSITSNFLVNLGYGDPAGLFPRLPRLSFDEAARIE
SIO_010081: PD885_RS02075
subclass of: SO_0000673
so part of: PD885_RS02075
location: 462434..463024
location: region:462434-463024:1
so has part: feature:462434-463024:1:exon

WP_088056620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:462434-463024:1:exon

PD885_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02080
old locus tag: PD885_00410
so part of: sequence
location: 463252..463980
location: region:463252-463980:1
so has part: feature:463252-463980:1:exon
subclass of: SO_0000010

61892874
type: Gene
SIO_000068: ncbigene

position:463252:1
position: 463252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463980:1
position: 463980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463252-463980:1:exon

PD885_RS02080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02080
old locus tag: PD885_00410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006450264.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YceI family protein
translation: MKTTHKLLLPLALTLAIAACSKPADNAAPAAETPAATAPAATAASPAPAAAESTASAAPAVQVQSGTYTLDPDHTDVLAQWSHFGFSNPTAHFGNVNGTLVYDAADVTKSTVQVTLPLTGLTSFTAKLDEHLKSGDFFNASKFPTATFKSTKVEAAGTNKLTVTGDLTIKDQTKPVVLDVTLNGAGEHPMKKVLAAGFDATTTIKRSDFGVDQYAPNVSDEVKIRITTEALQAKAGDAAAAK
SIO_010081: PD885_RS02080
subclass of: SO_0000673
so part of: PD885_RS02080
location: 463252..463980
location: region:463252-463980:1
so has part: feature:463252-463980:1:exon

WP_088056621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463252-463980:1:exon

PD885_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02085
pseudo: true
so part of: sequence
location: complement(464063..>464458)
location: region:464063-464458:-1
so has part: feature:464063-464458:-1:exon
subclass of: SO_0000010

61892875
type: Gene
SIO_000068: ncbigene

position:464063:-1
position: 464063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464458:-1
position: 464458
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464063-464458:-1:exon

PD885_RS02085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611069.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS4 family transposase
SIO_010081: PD885_RS02085
subclass of: SO_0000673
so part of: PD885_RS02085
location: complement(464063..>464458)
location: region:464063-464458:-1
so has part: feature:464063-464458:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464063-464458:-1:exon

PD885_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02090
old locus tag: PD885_00411
so part of: sequence
location: complement(464938..465726)
location: region:464938-465726:-1
so has part: feature:464938-465726:-1:exon
subclass of: SO_0000010

61892876
type: Gene
SIO_000068: ncbigene

position:464938:-1
position: 464938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465726:-1
position: 465726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464938-465726:-1:exon

PD885_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02090
old locus tag: PD885_00411
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011346228.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: siderophore-interacting protein
translation: MAAHTHTQIRRDPPLRSVLVVRCESMTPHMRRIVFGGSELAGFQSQAPDDHIKVFFPNADGAFVLPTMTPEGPRYAEGALPSPGRDYTPRAFDPQSGELSIDFVLHGDGIASSWAAQAQPGETLKIGGPRGSFLVADDYDHYVLIGDDTALPAIGRWLESMPADMHAEVFIEIADAAERQDLVTAADVDVYWLERNGIDAASSTLLEDGLRDYEPHDGDTFYWIGTESMRARAMRMFIEEHLGVDKASVRAKGYWKAESAAG
SIO_010081: PD885_RS02090
subclass of: SO_0000673
so part of: PD885_RS02090
location: complement(464938..465726)
location: region:464938-465726:-1
so has part: feature:464938-465726:-1:exon

WP_002805850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464938-465726:-1:exon

PD885_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: mdcA
locus tag: PD885_RS02095
pseudo: true
so part of: sequence
location: 465905..467526
location: region:465905-467526:1
so has part: feature:465905-467526:1:exon
subclass of: SO_0000010

61892877
type: Gene
SIO_000068: ncbigene

position:465905:1
position: 465905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467526:1
position: 467526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465905-467526:1:exon

PD885_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: mdcA
locus tag: PD885_RS02095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007963345.1
GO function: GO:0015451 - decarboxylation-driven active transmembrane transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: malonate decarboxylase subunit alpha
SIO_010081: PD885_RS02095
subclass of: SO_0000673
so part of: PD885_RS02095
location: 465905..467526
location: region:465905-467526:1
so has part: feature:465905-467526:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465905-467526:1:exon

PD885_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: mdcC
locus tag: PD885_RS02100
old locus tag: PD885_00415
so part of: sequence
location: 467536..467853
location: region:467536-467853:1
so has part: feature:467536-467853:1:exon
subclass of: SO_0000010

61892878
type: Gene
SIO_000068: ncbigene

position:467536:1
position: 467536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467853:1
position: 467853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467536-467853:1:exon

PD885_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: mdcC
locus tag: PD885_RS02100
old locus tag: PD885_00415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011038694.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: malonate decarboxylase acyl carrier protein
translation: METLRYRFDGRQDARAGLEHALVGVVASGNLEVLVERVPLDGAMEVQILTAARGFGAIWHAVLDDFAARHRLRNVHISINDVGATPAVVSLRLEQAMDVLQGADA
SIO_010081: PD885_RS02100
subclass of: SO_0000673
so part of: PD885_RS02100
location: 467536..467853
location: region:467536-467853:1
so has part: feature:467536-467853:1:exon

WP_002805848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:467536-467853:1:exon

PD885_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02105
old locus tag: PD885_00417
so part of: sequence
location: 468008..468910
location: region:468008-468910:1
so has part: feature:468008-468910:1:exon
subclass of: SO_0000010

61892879
type: Gene
SIO_000068: ncbigene

position:468008:1
position: 468008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468910:1
position: 468910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468008-468910:1:exon

PD885_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02105
old locus tag: PD885_00417
EC number: 4.1.1.88
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017174364.1
GO component: GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO function: GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0016831 - carboxy-lyase activity [Evidence IEA]
GO process: GO:0044262 - cellular carbohydrate metabolic process [Evidence IEA]; GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin-independent malonate decarboxylase subunit beta
translation: MTERSYYEADARERIDGLLDAGSFHELVGPRRRLISPHLAQLDTPGALDDGIVVGEGALRGRKVVIAAQQGAFLGGGVGEVHGAKLTGLLERAAATQPAAVLLLLDTGGVRLHEANAGLIAISEIMRAMLNARAAGVPVLALIGSGNGAFGGTGIVARCCSAVIMSEEGRLSLSGPDVIETVRGVEEFDARDRALVWRVTGGKHRYLLGEAQTLVADRIAAFADAAVTALDTCAEPEGDAALHTLERAHRQLSARIDAYGDCRDGLQIWKHQGIVDAQRLPLLDTEAFLAATADRSVPWN
SIO_010081: PD885_RS02105
subclass of: SO_0000673
so part of: PD885_RS02105
location: 468008..468910
location: region:468008-468910:1
so has part: feature:468008-468910:1:exon

WP_172402142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468008-468910:1:exon

PD885_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: mdcE
locus tag: PD885_RS02110
old locus tag: PD885_00418
so part of: sequence
location: 468901..469605
location: region:468901-469605:1
so has part: feature:468901-469605:1:exon
subclass of: SO_0000010

61892880
type: Gene
SIO_000068: ncbigene

position:468901:1
position: 468901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469605:1
position: 469605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468901-469605:1:exon

PD885_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: mdcE
locus tag: PD885_RS02110
old locus tag: PD885_00418
EC number: 4.1.1.88
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002805844.1
GO process: GO:0044262 - cellular carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin-independent malonate decarboxylase subunit gamma
translation: MELSRLLDQLFPLGHAIARNDDVLTGSATTAAGEVTVIGTANTLEVGVDHALALAATVLASTRAYLQRPIVMLADTAGQRLARRDELLGINGYFAHLARSLNLARTRGARLVTLVYGESVSGGFLAFGLMADHIHALPDAQIRVMDLRAMARVTKQSVDTLQALSKSSPVFAPGVENYVRMGAVESLWEGDLAQALLEALAATSQGDQRRALGAQRGGRTLARDVAAAVAAGEG
SIO_010081: PD885_RS02110
subclass of: SO_0000673
so part of: PD885_RS02110
location: 468901..469605
location: region:468901-469605:1
so has part: feature:468901-469605:1:exon

WP_088056623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468901-469605:1:exon

PD885_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: mdcG
locus tag: PD885_RS02115
old locus tag: PD885_00419
so part of: sequence
location: 469608..470249
location: region:469608-470249:1
so has part: feature:469608-470249:1:exon
subclass of: SO_0000010

61892881
type: Gene
SIO_000068: ncbigene

position:469608:1
position: 469608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470249:1
position: 470249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469608-470249:1:exon

PD885_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: mdcG
locus tag: PD885_RS02115
old locus tag: PD885_00419
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005917376.1
GO process: GO:0051191 - prosthetic group biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: malonate decarboxylase holo-[acyl-carrier-protein] synthase
translation: MVGRHALVWLRADARWQALTPGAQLRLQQWFAAGLPAVVARRDDGQAPGTLRLGVPLPPGEGKQRLALIASSGDIARITAPLQLGTVIAHAPGEMQAALRALQTQTQASALQPRVFGSFAWQALTGLAYIHAQSDLDLLWFIETAEQARAVVALLQRWEQRYGLRADGELLLPDDNAVSWREYAGNAQQVLVKSNHGCRLLPRTAVFPVWSAA
SIO_010081: PD885_RS02115
subclass of: SO_0000673
so part of: PD885_RS02115
location: 469608..470249
location: region:469608-470249:1
so has part: feature:469608-470249:1:exon

WP_002805842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469608-470249:1:exon

PD885_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: mdcB
locus tag: PD885_RS02120
old locus tag: PD885_00420
so part of: sequence
location: 470411..471247
location: region:470411-471247:1
so has part: feature:470411-471247:1:exon
subclass of: SO_0000010

61892882
type: Gene
SIO_000068: ncbigene

position:470411:1
position: 470411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471247:1
position: 471247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470411-471247:1:exon

PD885_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: mdcB
locus tag: PD885_RS02120
old locus tag: PD885_00420
EC number: 2.4.2.52
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016945024.1
GO function: GO:0046917 - triphosphoribosyl-dephospho-CoA synthase activity [Evidence IEA]
GO process: GO:0019361 - 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: triphosphoribosyl-dephospho-CoA synthase MdcB
translation: MSQATASRLAHRLGRLAVGALHAELTCAPKPGLVTPFDTGSHTDMDASTFLRSLFALRGYFVAVAQAGIDNAPFERLRQLGIDAETAMLHATGGVNTHRGAIFSLGLLTAQAAHLRAAYRRRLSGEAVCNGVQLWRDALQAAPLNPHSHGQRVRAHYQISGAREQAAAGYPLLREIALPCLRAARTNGATQQAALAQTLMHLVAEVDDLSLLHRGGRAGLAYARAQAHAFLADGGITQPQWRERLDWVGRQFVARRLSPGGSADLLACAWFLHRQETA
SIO_010081: PD885_RS02120
subclass of: SO_0000673
so part of: PD885_RS02120
location: 470411..471247
location: region:470411-471247:1
so has part: feature:470411-471247:1:exon

WP_040762536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470411-471247:1:exon

PD885_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: mdcH
locus tag: PD885_RS02125
old locus tag: PD885_00422
so part of: sequence
location: 471507..472427
location: region:471507-472427:1
so has part: feature:471507-472427:1:exon
subclass of: SO_0000010

61892883
type: Gene
SIO_000068: ncbigene

position:471507:1
position: 471507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472427:1
position: 472427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471507-472427:1:exon

PD885_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: mdcH
locus tag: PD885_RS02125
old locus tag: PD885_00422
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007962436.1
GO function: GO:0016740 - transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: malonate decarboxylase subunit epsilon
translation: MSLVMLCSGQGGQHAEMFARVANVPAAAAVLASADQVLGTSAQTLAADPSCYANAVAQPLVCAGTLAQWQVVREQLPTPLLVLGYSVGELAAHAVAGSVDIDTCLQLAATRARFMDAASPDHAGLMAVVGLPRGVLETLCRTHGAALAIINGDDHAVLGGPRDALQALGDAAQWQGARITLLPVSVPAHTPWLRAAADAFATELKTANITAPKLRVLAGVDARAVTTQAVVIDTLSAQIAQTVRLHDVLVQATERGARAFLELGPGSALARLAREAVPDCQARSVDEFQSIQGVVEWVNAECERAA
SIO_010081: PD885_RS02125
subclass of: SO_0000673
so part of: PD885_RS02125
location: 471507..472427
location: region:471507-472427:1
so has part: feature:471507-472427:1:exon

WP_088056624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471507-472427:1:exon

PD885_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02130
old locus tag: PD885_00423
so part of: sequence
location: 472515..473780
location: region:472515-473780:1
so has part: feature:472515-473780:1:exon
subclass of: SO_0000010

61892884
type: Gene
SIO_000068: ncbigene

position:472515:1
position: 472515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473780:1
position: 473780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472515-473780:1:exon

PD885_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02130
old locus tag: PD885_00423
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010379550.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPQIATILGLVIMFIAATALPINMGAVAFALAFVIGGVWVGLQGKEVLAGFPGDLFLTLVGITYLFAIAQKNGTVDLLVHWAVRGRIVAIPWVMFVITGLLTTFGALGPAAVAIIGPVALRFAKQYRINPLMIGLLVIHGAQGGGFSPISVYGGITNKVVEKAGLDVAEMAVFLTSLGFNLMMAIICFCAFGGLKLMRRQELSLADAHYVPMADDRASTRPVAIEGHGSLVAAGGGRLPANPRALDAVALTPDRLITLGGLLGLGIAALVYNLNVGLVSITVAVALALIWPNAQKGAVDYIGTGVSHIGMPLLGALLLCYVGGIVSAFASSAAVLGATIPLAVPFLMQGQLGAAGVICALAVSSTIVDVSPFSTNGALVVASAAKGERDALFRRFLVYSGLVVLLGPLVAWLLLVVPSWL
SIO_010081: PD885_RS02130
subclass of: SO_0000673
so part of: PD885_RS02130
location: 472515..473780
location: region:472515-473780:1
so has part: feature:472515-473780:1:exon

WP_002805837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472515-473780:1:exon

PD885_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02135
old locus tag: PD885_00424
pseudo: true
so part of: sequence
location: 473823..474295
location: region:473823-474295:1
so has part: feature:473823-474295:1:exon
subclass of: SO_0000010

61892885
type: Gene
SIO_000068: ncbigene

position:473823:1
position: 473823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474295:1
position: 474295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473823-474295:1:exon

PD885_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02135
old locus tag: PD885_00424
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017155895.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: FCD domain-containing protein
SIO_010081: PD885_RS02135
subclass of: SO_0000673
so part of: PD885_RS02135
location: 473823..474295
location: region:473823-474295:1
so has part: feature:473823-474295:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:473823-474295:1:exon

PD885_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02140
old locus tag: PD885_00425
so part of: sequence
location: complement(474562..474981)
location: region:474562-474981:-1
so has part: feature:474562-474981:-1:exon
subclass of: SO_0000010

61892886
type: Gene
SIO_000068: ncbigene

position:474562:-1
position: 474562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474981:-1
position: 474981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474562-474981:-1:exon

PD885_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02140
old locus tag: PD885_00425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003483275.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: STAS domain-containing protein
translation: MTTLAIQIDPPQDTSQRVILTGRLDTHTYQELDAALSPLLGTRITTLVLDLSALEYISSAGIRCIFKARKALTTRQGKVLVANPQPQIRKVFDMVKAVPLNDVFTSTEELDAYLAAMQRKVIEEHAHGDTLIVPHFAEA
SIO_010081: PD885_RS02140
subclass of: SO_0000673
so part of: PD885_RS02140
location: complement(474562..474981)
location: region:474562-474981:-1
so has part: feature:474562-474981:-1:exon

WP_002805834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474562-474981:-1:exon

PD885_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02145
old locus tag: PD885_00426
so part of: sequence
location: complement(474978..475409)
location: region:474978-475409:-1
so has part: feature:474978-475409:-1:exon
subclass of: SO_0000010

61892887
type: Gene
SIO_000068: ncbigene

position:474978:-1
position: 474978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475409:-1
position: 475409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474978-475409:-1:exon

PD885_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02145
old locus tag: PD885_00426
EC number: 2.7.13.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005917392.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MKFDLAIVPSLAQLAGANDALEESLTREGLHAERIGQVRLIVEELGCNAITHGQCAAQPLRLQLQLDLQALVLEMHDPGSAFDPCAAPMPDLNAELDERATGGLGLFLVHQFADHIGYSRDGAYNIVRVTLLHPYAPIPEALS
SIO_010081: PD885_RS02145
subclass of: SO_0000673
so part of: PD885_RS02145
location: complement(474978..475409)
location: region:474978-475409:-1
so has part: feature:474978-475409:-1:exon

WP_002805832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474978-475409:-1:exon

PD885_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02150
old locus tag: PD885_00427
so part of: sequence
location: complement(475406..477487)
location: region:475406-477487:-1
so has part: feature:475406-477487:-1:exon
subclass of: SO_0000010

61892888
type: Gene
SIO_000068: ncbigene

position:475406:-1
position: 475406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477487:-1
position: 477487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475406-477487:-1:exon

PD885_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02150
old locus tag: PD885_00427
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015471678.1
GO function: GO:0016791 - phosphatase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SpoIIE family protein phosphatase
translation: MHDSKAAMIKRIRRQGERAIATLPRSLPQPTPVTPRVHWRNSLRMRVLLATTAVLVVLLAVLGTVFYLGARAELVEAARTEVNSLTEQTARSLAAMLDSAQVSGRTLAASSGGVGLQPFNLRALLLATLTGDPDIGAARLIIEPRTQKAGDAGFVWYVHRDGTRTVETSALALGYDYRAMPWYLRTRREGRAWWSEPYIDANGGGLYTSYNLPLRRPGDAPDAVPVGMVSVELPLHHLRNIIDQLPRDTNIQPMLVSPEGMLVFSPNPALNLHRTLDAYVARSRPDLLPLQRAVAAGQPISFSHTAPDGERFLTHSAAVGRSGWTFVLSASEGYVLAGLNWLAAWVSLAALLGAVVWWWLMGRITRKLTRPIEELTDTAEHFRRGQFEYPLQHIERNDEVGVMARAFDSARDAIGHHIAEIGEMTAARERMHSELQIAREIQQAMLPSGRTFDRASSHLETCAWLEPAKAVGGDFYHFVETEPGLLWFVIGDVSDKGVPAALFMVRAVSMLEIAARRHTRPDSILIAASTRLAENNDTCMFATVLCGLIDVMSGEYCLASAGHEPPLLIDIDGKARPLPLETGAPLGIEPQVSYPVLQGRMTAGQTLLGYTDGVTEAMNEHGASFGLNRLLAALHPRRSAAAQCKAVVADIARFTGKADPYDDITLLAIRLRQEHAGSVAETGRDTPGNATTP
SIO_010081: PD885_RS02150
subclass of: SO_0000673
so part of: PD885_RS02150
location: complement(475406..477487)
location: region:475406-477487:-1
so has part: feature:475406-477487:-1:exon

WP_002805830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475406-477487:-1:exon

PD885_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02155
old locus tag: PD885_00428
so part of: sequence
location: 477653..478252
location: region:477653-478252:1
so has part: feature:477653-478252:1:exon
subclass of: SO_0000010

61892889
type: Gene
SIO_000068: ncbigene

position:477653:1
position: 477653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478252:1
position: 478252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477653-478252:1:exon

PD885_RS02155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02155
old locus tag: PD885_00428
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017155889.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTQTPSPATEAAAEADVEAGGRGLVKLNPSPRKAFEVTLTLDKAPSAFGLVRGAAQYDVVNEQECGKIQHETGTAGRITSQEDFVLKKISDTEYRGTVYLDLMQDEDYYGRGVCHWEFSGASVLLKATGAEAETRFLSFIEAATVTGQQASTKHYWRERYPRSEMSDFPDMGKRDVEEFKPEIRDNLFIITLAAKEAAP
SIO_010081: PD885_RS02155
subclass of: SO_0000673
so part of: PD885_RS02155
location: 477653..478252
location: region:477653-478252:1
so has part: feature:477653-478252:1:exon

WP_172404505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477653-478252:1:exon

PD885_RS02160
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02160
old locus tag: PD885_00430
so part of: sequence
location: complement(478319..479125)
location: region:478319-479125:-1
so has part: feature:478319-479125:-1:exon
subclass of: SO_0000010

61892890
type: Gene
SIO_000068: ncbigene

position:478319:-1
position: 478319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479125:-1
position: 479125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478319-479125:-1:exon

PD885_RS02160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02160
old locus tag: PD885_00430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002801519.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MKPRKPYSTDISDEEWAFAAPYLTLMDVQAPQRKYELRAMFNALRWIARAGAPWRLLPNDFPPWEAVYQQTQRWLQAGCFEAMVSDLRSLLRVAQGKKGQPSAVIFDARTLQSTCESGPRAGYDGYKRKKGSKVHMAVDTLGHLLAVQVTPANEQERAQVRSLAQEVQHVTGETVKIAFVDQGYTGQEPAQAATEEGIELQVIKLQEAKKGFVLLPRRWVVERSFGWANRFRRLARDYERLPETLAGLHFVVFTILMLGNAATLFQSS
SIO_010081: PD885_RS02160
subclass of: SO_0000673
so part of: PD885_RS02160
location: complement(478319..479125)
location: region:478319-479125:-1
so has part: feature:478319-479125:-1:exon

WP_002802516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:478319-479125:-1:exon

PD885_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02165
old locus tag: PD885_00431
pseudo: true
so part of: sequence
location: <479165..480430
location: region:479165-480430:1
so has part: feature:479165-480430:1:exon
subclass of: SO_0000010

61892891
type: Gene
SIO_000068: ncbigene

position:479165:1
position: 479165
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:480430:1
position: 480430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479165-480430:1:exon

PD885_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02165
old locus tag: PD885_00431
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017158927.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF2974 domain-containing protein
SIO_010081: PD885_RS02165
subclass of: SO_0000673
so part of: PD885_RS02165
location: <479165..480430
location: region:479165-480430:1
so has part: feature:479165-480430:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:479165-480430:1:exon

PD885_RS02170
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: aceE
locus tag: PD885_RS02170
old locus tag: PD885_00432
so part of: sequence
location: 480894..483581
location: region:480894-483581:1
so has part: feature:480894-483581:1:exon
subclass of: SO_0000010

61892892
type: Gene
SIO_000068: ncbigene

position:480894:1
position: 480894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483581:1
position: 483581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480894-483581:1:exon

PD885_RS02170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: aceE
locus tag: PD885_RS02170
old locus tag: PD885_00432
EC number: 1.2.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019660853.1
GO component: GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO function: GO:0004738 - pyruvate dehydrogenase activity [Evidence IEA]
GO process: GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate dehydrogenase (acetyl-transferring), homodimeric type
translation: MNWLNEVLHNDPNPLETQEWLESIKAVIDVEGPERAHQLLEGMVEQTRRAGAYLPFSPTTEYVNTIAPVNEAKHPGDSALEWKIRSIIRWNAMATVVRANRKPGDLGGHIASFASSATLYDVGFNHFWRAPSDTHPGDLLFIQGHSAPGIYARAFLEGRITQAQLDNFRMEVDGQGISSYPHPWLMPEFWQTPTVSMGLGPLAAIYQAQFMRYLENRGLIEKSDRKVWCFIGDGESDEPETLGAIALAGREGLDNLIFVVNCNLQRLDGPVRGNGKIIQELEGVFRGGGWNVIKLLWGGYWDALLAKDSDGVLRKLMMETVDGEYQNCKAFGGAYTRANFFGKYPETAAMVAGLSDEDIWRLNRGGHDPHKVYAAYHQAVNTTGMPTVILAKTVKGYGMGSAGEALNPTHQTKKLDDAAVKHFRDRFNIPVTDAQLEDGQVPFYHPGEDSPEVQYLKERRNVLGGFLPSRRPKASKSFVAPTLDKFERLLKDSGERSYSTTMSFVQSLNIALRDKELGPRIVPIVADEARTFGMEGMFRQIGIYAPFGQKYKPVDADQLMYYREDQTGQVLQQGISEPGAIASWMAAGTSYSVSDVPMLPFYIYYSMFGFQRVGDIAWQAADMRTRGFLLGGTAGRTTLNGEGLQHEDGFSQVIAGSIPNVRSFDPTFGFEVTVIMQHGMKAMMEDQIDEYYYITLMNENYAHPGMPDGAAEGIIKGMYLLKDAGKPKKGELRVQLLGSGTILREAIAAAELLDKDFGVTADIWSCPSLNEVRRDGYAVERWNRLHPEAEQRKPYVTQLLEGRQGPAIAATDYVRAFADQIRAFVPMTYTVLGTDGFGRSDTRANLRRFFEVDRYYIAHAAIAALAKDGKMTGKDVARAIEQYGIDPEKGNPVGV
SIO_010081: PD885_RS02170
subclass of: SO_0000673
so part of: PD885_RS02170
location: 480894..483581
location: region:480894-483581:1
so has part: feature:480894-483581:1:exon

WP_040762529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480894-483581:1:exon

PD885_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02175
old locus tag: PD885_00434
so part of: sequence
location: 484022..485458
location: region:484022-485458:1
so has part: feature:484022-485458:1:exon
subclass of: SO_0000010

61892893
type: Gene
SIO_000068: ncbigene

position:484022:1
position: 484022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485458:1
position: 485458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484022-485458:1:exon

PD885_RS02175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02175
old locus tag: PD885_00434
inference: COORDINATES: protein motif:HMM:NF024700.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MFHLAYHDQDGQKTEIGEVKIGFAGQQSGRTTDSIPQRFTSLPSEYFSIGQSTEYYSKLVAIQGYERAWLESLGDLAVMPAKRSVAYGEKVFIDSLTRTVSESVIEQQFARIAAGLPALTSFDFEFSRELSYQLSEVRLRFKVSPESKPPSNIHVLIGRNGVGKTKILNGMIGAALRTADNVSATGCFIEHRDCYQSQIINEKYFSGVISVSFSAFDPFNPPPNQNDREGGVRYSYIGLKDNSVSGVNAEPKGMQTLADEFYRSLLVCSSQNKKRAQWLECISILESDPNFAEMGLARLFEVKNQTSEVITTLFMLKISSGHAIVLLTLTKLIESVEEKTLVLIDEPESHLHPPLLSAFVRALSHLLTTENAVAIVATHSPVLLQEVPRDCAWILSRSRLVSSADRPAIETFGGNLGVLTREAFKFEVSKSGFHSMLATSVASGKGFDELMAEYEGKVAMEGQAILMSMIGSRDGGNV
SIO_010081: PD885_RS02175
subclass of: SO_0000673
so part of: PD885_RS02175
location: 484022..485458
location: region:484022-485458:1
so has part: feature:484022-485458:1:exon

WP_157276294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484022-485458:1:exon

PD885_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02180
old locus tag: PD885_00435
so part of: sequence
location: 485458..486318
location: region:485458-486318:1
so has part: feature:485458-486318:1:exon
subclass of: SO_0000010

61892894
type: Gene
SIO_000068: ncbigene

position:486318:1
position: 486318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485458-486318:1:exon

PD885_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02180
old locus tag: PD885_00435
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: HNH endonuclease
translation: MRQVQMYSESFTGVYASCVGGVGNPAKLADYNAAMPMMQGEAIIYERLARQSAIYQIQGQKTRLDDIVRGALTRRDLTDLYEVQMVGLAKHARFHYDKILLSPPHKKCPYCSLGQATTLDHYLPKSRFPQFSVAVCNLVPCCKDCQSKKGKKYAATKSSQTLHPYFDDPTYFQVNWVYGHVVRARAITVEFYVKPPSGWPMNMQQRVDAHFSSHRLAERYGIEAASELASVREIYADLRASGDFNQIRMLLQRQAKGHIANCPNSWQAAFYSALAADNWYCNSPVV
SIO_010081: PD885_RS02180
subclass of: SO_0000673
so part of: PD885_RS02180
location: 485458..486318
location: region:485458-486318:1
so has part: feature:485458-486318:1:exon

WP_002805822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485458-486318:1:exon

PD885_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02185
old locus tag: PD885_00436
pseudo: true
so part of: sequence
location: complement(486473..487598)
location: region:486473-487598:-1
so has part: feature:486473-487598:-1:exon
subclass of: SO_0000010

61892895
type: Gene
SIO_000068: ncbigene

position:486473:-1
position: 486473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487598:-1
position: 487598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486473-487598:-1:exon

PD885_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02185
old locus tag: PD885_00436
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: PD885_RS02185
subclass of: SO_0000673
so part of: PD885_RS02185
location: complement(486473..487598)
location: region:486473-487598:-1
so has part: feature:486473-487598:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:486473-487598:-1:exon

PD885_RS20345
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS20345
so part of: sequence
location: complement(487647..488405)
location: region:487647-488405:-1
so has part: feature:487647-488405:-1:exon
subclass of: SO_0000010

61896321
type: Gene
SIO_000068: ncbigene

position:487647:-1
position: 487647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488405:-1
position: 488405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487647-488405:-1:exon

PD885_RS20345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS20345
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKCLWGEASHEFASSLRGDIKVVASAANLERVFGQVEVPAVLNNPNVTSLGGQPISKLQALYAQGGAGAVLPEVQTHFIQTAPKGIFVTPASIATEIKNVTFSREFAESFELQETHFRPSAELSASGMVRAPTGLDAPAASIAETALSAEAAASRRLATGTIRGLGVVGAAAAVYDLGVTTKNTQRLDAQGNSTAADAEVTRYTTRNLGAAGGAALGGTMGAALGVESGPGLLVTGAIGGIVGVVATSPQF
SIO_010081: PD885_RS20345
subclass of: SO_0000673
so part of: PD885_RS20345
location: complement(487647..488405)
location: region:487647-488405:-1
so has part: feature:487647-488405:-1:exon

WP_145954074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487647-488405:-1:exon

PD885_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02195
old locus tag: PD885_00441
so part of: sequence
location: complement(488765..489196)
location: region:488765-489196:-1
so has part: feature:488765-489196:-1:exon
subclass of: SO_0000010

61892896
type: Gene
SIO_000068: ncbigene

position:488765:-1
position: 488765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489196:-1
position: 489196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488765-489196:-1:exon

PD885_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02195
old locus tag: PD885_00441
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSETFEWISFPEGRARFSGGIRGFDELGHETFAVEIDQAEVFGELEPKWLEDDVHFSIHIISFGYLNRIEVGMPLPSFSTRSFTNDQLETVKVLVKKLIVAGLQFEDRPSSLMETKKSSFIGKVIFEQNWALVTSNDASSLHE
SIO_010081: PD885_RS02195
subclass of: SO_0000673
so part of: PD885_RS02195
location: complement(488765..489196)
location: region:488765-489196:-1
so has part: feature:488765-489196:-1:exon

WP_002804036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:488765-489196:-1:exon

PD885_RS22375
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS22375
so part of: sequence
location: complement(489299..489427)
location: region:489299-489427:-1
so has part: feature:489299-489427:-1:exon
subclass of: SO_0000010

79411894
type: Gene
SIO_000068: ncbigene

position:489299:-1
position: 489299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489427:-1
position: 489427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489299-489427:-1:exon

PD885_RS22375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS22375
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDEALSDDLLADIGLHLKQQRVLSHDAFARWSKPKPAALRA
SIO_010081: PD885_RS22375
subclass of: SO_0000673
so part of: PD885_RS22375
location: complement(489299..489427)
location: region:489299-489427:-1
so has part: feature:489299-489427:-1:exon

WP_257784593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489299-489427:-1:exon

PD885_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02200
old locus tag: PD885_00442
so part of: sequence
location: complement(489446..489922)
location: region:489446-489922:-1
so has part: feature:489446-489922:-1:exon
subclass of: SO_0000010

61892897
type: Gene
SIO_000068: ncbigene

position:489446:-1
position: 489446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489922:-1
position: 489922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489446-489922:-1:exon

PD885_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02200
old locus tag: PD885_00442
inference: COORDINATES: protein motif:HMM:NF013921.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MPQHIVQRGNNRLPCFLDDGDRLRYLHLLHEALHATGCQLHAYVLMDKHVHLLAMPPAKGRIGQMMQRLGRNYVALFNGRHGRTGTLWEGRYKACLVNSADYVRRCYRYIELNPARARMTDDPMAYRWSSCPANLGQRRYSALAPHPGWLALGNDPIE
SIO_010081: PD885_RS02200
subclass of: SO_0000673
so part of: PD885_RS02200
location: complement(489446..489922)
location: region:489446-489922:-1
so has part: feature:489446-489922:-1:exon

WP_002804040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489446-489922:-1:exon

PD885_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02205
pseudo: true
so part of: sequence
location: 490267..492051
location: region:490267-492051:1
so has part: feature:490267-492051:1:exon
subclass of: SO_0000010

61892898
type: Gene
SIO_000068: ncbigene

position:490267:1
position: 490267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492051:1
position: 492051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490267-492051:1:exon

PD885_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010365331.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: chloride channel protein
SIO_010081: PD885_RS02205
subclass of: SO_0000673
so part of: PD885_RS02205
location: 490267..492051
location: region:490267-492051:1
so has part: feature:490267-492051:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:490267-492051:1:exon

PD885_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02210
old locus tag: PD885_00446
so part of: sequence
location: 492286..493764
location: region:492286-493764:1
so has part: feature:492286-493764:1:exon
subclass of: SO_0000010

61892899
type: Gene
SIO_000068: ncbigene

position:492286:1
position: 492286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493764:1
position: 493764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492286-493764:1:exon

PD885_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02210
old locus tag: PD885_00446
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002804044.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SulP family inorganic anion transporter
translation: MSKLFSLRQQWLGNVRGDVLAGIVVALALIPEAIAFSIIAGVDPKVGLYAAFCIAVVTSIAGGRPGMISAATGAMALLMVNLVRDHGLQYLLAATLLAGVLQLIAGALRLGALMRFVSRSVITGFVNALAILIFLAQLPELTGMPWPVYAVCVAALAIIYLLPRFTTVIPSPLVAIVVLTAVCVYWRIDIRTVGDMGHLPDSLPTFLLPNVPMRWDTLRILLPVSTTLAVVGLLESLMTAQVVEDLTDTPSQRNRECVGQGLANIVAGCFGGMAGCAMIGQSIINIRSGGRGRLSCLVAGLALLLMVVYGATWVRQIPMAALVAVMIMVSIGTFNWSSLRDLRTHPKSSSVVMIGTVLVTVWTHDLAQGVLAGVLLSALFFARKVGRMLHVESSDRDDGVRVYAVRGQVFFASAGQFACSFDVLNAPSNVVIDLSHAHVWDISAVGALDRVVLKLRTHGAEVQVIGLNQASDTLIERLGTHRRDGARLHVGH
SIO_010081: PD885_RS02210
subclass of: SO_0000673
so part of: PD885_RS02210
location: 492286..493764
location: region:492286-493764:1
so has part: feature:492286-493764:1:exon

WP_002804044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492286-493764:1:exon

PD885_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02215
so part of: sequence
location: complement(493717..493959)
location: region:493717-493959:-1
so has part: feature:493717-493959:-1:exon
subclass of: SO_0000010

61892900
type: Gene
SIO_000068: ncbigene

position:493717:-1
position: 493717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493959:-1
position: 493959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493717-493959:-1:exon

PD885_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157380.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRLIFDLKDLLAFWKAEARAFDACDVPASALAFRNCHRRLSALLGEHTAQTAPTTALVASTHQGSMPNVQARTIAPMGS
SIO_010081: PD885_RS02215
subclass of: SO_0000673
so part of: PD885_RS02215
location: complement(493717..493959)
location: region:493717-493959:-1
so has part: feature:493717-493959:-1:exon

WP_087946413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:493717-493959:-1:exon

PD885_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02220
old locus tag: PD885_00447
so part of: sequence
location: 494163..494375
location: region:494163-494375:1
so has part: feature:494163-494375:1:exon
subclass of: SO_0000010

61892901
type: Gene
SIO_000068: ncbigene

position:494163:1
position: 494163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494375:1
position: 494375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494163-494375:1:exon

PD885_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02220
old locus tag: PD885_00447
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017158352.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNNQNGNQGIDDPRPPNGVKAPGKNEDLLQDGPAQVSEIDDDDGIEDDVDEEDDEEDDQTSLQERRRNL
SIO_010081: PD885_RS02220
subclass of: SO_0000673
so part of: PD885_RS02220
location: 494163..494375
location: region:494163-494375:1
so has part: feature:494163-494375:1:exon

WP_002804047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494163-494375:1:exon

PD885_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02225
so part of: sequence
location: 494465..494541
location: region:494465-494541:1
so has part: feature:494465-494541:1:exon
subclass of: SO_0000011

61892902
type: Gene
SIO_000068: ncbigene

position:494465:1
position: 494465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494541:1
position: 494541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494465-494541:1:exon

PD885_RS02225
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 48664
nc RNA class: other
locus tag: PD885_RS02225
product: sX9 sRNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02228
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: PD885_RS02225
subclass of: SO_0000673
so part of: PD885_RS02225
location: 494465..494541
location: region:494465-494541:1
so has part: feature:494465-494541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:494465-494541:1:exon

PD885_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02230
so part of: sequence
location: complement(494559..494747)
location: region:494559-494747:-1
so has part: feature:494559-494747:-1:exon
subclass of: SO_0000010

61892903
type: Gene
SIO_000068: ncbigene

position:494559:-1
position: 494559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494747:-1
position: 494747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494559-494747:-1:exon

PD885_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTRANRASCAAITPRAGFERKLASDAAFRADSDARLQWIHARAPYAAITGWRYPVRRELAE
SIO_010081: PD885_RS02230
subclass of: SO_0000673
so part of: PD885_RS02230
location: complement(494559..494747)
location: region:494559-494747:-1
so has part: feature:494559-494747:-1:exon

WP_065975429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494559-494747:-1:exon

PD885_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02235
old locus tag: PD885_00448
pseudo: true
so part of: sequence
location: complement(<494722..495146)
location: region:494722-495146:-1
so has part: feature:494722-495146:-1:exon
subclass of: SO_0000010

61892904
type: Gene
SIO_000068: ncbigene

position:494722:-1
position: 494722
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:495146:-1
position: 495146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494722-495146:-1:exon

PD885_RS02235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02235
old locus tag: PD885_00448
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014091180.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: carboxypeptidase
SIO_010081: PD885_RS02235
subclass of: SO_0000673
so part of: PD885_RS02235
location: complement(<494722..495146)
location: region:494722-495146:-1
so has part: feature:494722-495146:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:494722-495146:-1:exon

PD885_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02240
old locus tag: PD885_00449
so part of: sequence
location: 495461..496183
location: region:495461-496183:1
so has part: feature:495461-496183:1:exon
subclass of: SO_0000010

61892905
type: Gene
SIO_000068: ncbigene

position:495461:1
position: 495461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496183:1
position: 496183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495461-496183:1:exon

PD885_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02240
old locus tag: PD885_00449
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003489275.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MPPAISISDLHVAYRGRAVLQGLDMQVAPGTVYALLGGNGAGKSSTLSTLLGFVKPTSGSLLVDGIDPVAHPGKARSRLAYLPENVALYEHLSALENADYLLSLAGQRRSQAEIGQVFAAAGLQREAWNQRLAGFSKGMRQKVAIAVATLRQVPVLLLDEPTSGLDPRAIADFNRLLSSVRERGGAVLMVTHDLLGAVEVADRIGFLENGRIADDIGAGDSGLDVRALHARFARPQNQAA
SIO_010081: PD885_RS02240
subclass of: SO_0000673
so part of: PD885_RS02240
location: 495461..496183
location: region:495461-496183:1
so has part: feature:495461-496183:1:exon

WP_040762254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495461-496183:1:exon

PD885_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02245
old locus tag: PD885_00450
so part of: sequence
location: 496180..497616
location: region:496180-497616:1
so has part: feature:496180-497616:1:exon
subclass of: SO_0000010

61892906
type: Gene
SIO_000068: ncbigene

position:496180:1
position: 496180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497616:1
position: 497616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496180-497616:1:exon

PD885_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02245
old locus tag: PD885_00450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016900947.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3526 domain-containing protein
translation: MSAVLLVAREELRFLARNRSAAIGVVLLISITLVATLTAAHHQREVAEFRARQQQAAQQAFEAQPDRHPHRVVHYGHFIYRPLPALAAFDSGVDAFTGNSMFLEGHRQNTANFGDVRQSSLLVRFGQLTPAFVLQVLAPLMLVFLGYGVVAREQETGTLRALLLQGATRWQLLGGKYLALAAVAGACLLPALVGLVPIAVLPGQTLLVALLVLAYSAYLLVWCALVLAVSMLCRRGRDALLVSLALWVWLALLVPRVAPDVASAAWRLPTRLETDVAIQRDLRTLGDSHTPDDPHFSHFKQQTLDRYGVQRVEDLPVNYKGLLALEGERLTSSLFERYAARDSRIQKEQNLLARTFALLSPTVALRELSMTLAETDLHAHERFLAQAERYRYTLVQQLNQLQADAVSMADDTAQDAGADQRKRISSEHWHKIPVFAFQQASAAEVVHAANAALGLVGAWLLAALCMVVAAGRGVGVAR
SIO_010081: PD885_RS02245
subclass of: SO_0000673
so part of: PD885_RS02245
location: 496180..497616
location: region:496180-497616:1
so has part: feature:496180-497616:1:exon

WP_002804052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:496180-497616:1:exon

PD885_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02250
old locus tag: PD885_00451
so part of: sequence
location: 497616..498884
location: region:497616-498884:1
so has part: feature:497616-498884:1:exon
subclass of: SO_0000010

61892907
type: Gene
SIO_000068: ncbigene

position:498884:1
position: 498884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497616-498884:1:exon

PD885_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02250
old locus tag: PD885_00451
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005911318.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3526 domain-containing protein
translation: MVLWKYELLLLLRTRAALAGLLLLTLLTACSLISGQHAIDAQRDNIARIAALQQEDDAAVADYVARSSDAGSAAYYSFHPTWDMPSPLAFAVVGMRDVSPYILRVRALGLEAQIFDGDSYNPELALAGRFDYAFVLVFLLPLFVIALLFDLRSGEREAGRARMLAALPGAGTALLVRRVVVRAAAVLVCLSVPFAVAATLNAVPLLQQLAVLALSCVYLLFWVLLAVLVGRSRWRPAAHATALATCWVVLALVAPAFAHVVINQAVPVNQGTEIARLQREAVNHAWDIPRAETMQAFYTKNPQWADSAPLTSAFHYKWYFAFHENGDQQVAPQVAAYRQGLQRREALAQRVASVLPPVALQAALTRLADTDLQAQLAYQDRIRAYHQALRAFYYGYLFRDRPFTRDDFGRAPRFDATADPAS
SIO_010081: PD885_RS02250
subclass of: SO_0000673
so part of: PD885_RS02250
location: 497616..498884
location: region:497616-498884:1
so has part: feature:497616-498884:1:exon

WP_002804053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497616-498884:1:exon

PD885_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02255
old locus tag: PD885_00452
so part of: sequence
location: 498968..501112
location: region:498968-501112:1
so has part: feature:498968-501112:1:exon
subclass of: SO_0000010

61892908
type: Gene
SIO_000068: ncbigene

position:498968:1
position: 498968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501112:1
position: 501112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498968-501112:1:exon

PD885_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02255
old locus tag: PD885_00452
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016900945.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
GO function: GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO process: GO:0015891 - siderophore transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent siderophore receptor
translation: MFVLTPRRRMAHTLPLLSVLTCAGIGPFADAAEPQARDLDAVQVRSQYTPYRALSVTGATKTDTPLRDLPISARVLDQTLLDDAGVTDLAGALEMASGITKANNLGGLWDSYSIRGFTGDPNFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALYGRGEPGGAVNIVTKKPLFQPQHSVDLSAGRFDSYRAAVDSTGPLGKNVAYRLNVMHKDQHSFRDTVDSDNTLLAPSLLWMPTPDTTVSYELELVRIHAPFDRGVTAIDGDANRLPASRFLGEPRDGDIDLHSTGHQVFVVHGLNQTWSLQGGATYRDSGMRGFSTEPWTLQADDRTLRREHRYRNYQGRDIATRAELLGTLQAGSVTHDVLFGIDGNRFDDSRFQQRARSAAAPYSIDVLAPQYGVAQPGRLATITDTDERQQVWGVYAQDQIGLGTRWKALLGLRYDHYQQDLNDQLRGATQRASDGVVSPRAGLIFHVDDALSVYASAAAGFRPNSGVGADGQSFAPEKSRSLETGLKYVRPGDGVEATLAAYRIDKKNVLSLDPADTSFSLPVGEMRSQGVELDLLGRLTPRLAASVGLAFTDSQVIRSNAAAASTGLAEGRRFPNVPRFSGNAFVNYEQPLTGKRSAAVGVGVSHTGERLGSVDSNTDFVLPAYTVWRLVGHYDLSERLRLYARIENLTDRRYAAFSYSEQWVYPGAPRSWTVGVRLRF
SIO_010081: PD885_RS02255
subclass of: SO_0000673
so part of: PD885_RS02255
location: 498968..501112
location: region:498968-501112:1
so has part: feature:498968-501112:1:exon

WP_002804055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:498968-501112:1:exon

PD885_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02260
old locus tag: PD885_00453
so part of: sequence
location: complement(501285..501956)
location: region:501285-501956:-1
so has part: feature:501285-501956:-1:exon
subclass of: SO_0000010

61892909
type: Gene
SIO_000068: ncbigene

position:501285:-1
position: 501285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501956:-1
position: 501956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501285-501956:-1:exon

PD885_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02260
old locus tag: PD885_00453
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017116847.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2894 domain-containing protein
translation: MSTQATSARARLDSWRSQGADQIDPVRFHLMQTLATRAQTQADAVRAVLEEKLARLVDAYAATLKKTPPGYLTGADAPSPSQPGAGGQRSALGALTDQMAGHAALMEVNSRKTSRSDATLFPELPALDEFRRTWATVRTASQVRQSLQDAPKDAGPLNSSVLVHRCVSLMRERSPGYLQHFLGYVDALSWLEQMHTARALANDDVVPVVPGKKRSKRPPTRRG
SIO_010081: PD885_RS02260
subclass of: SO_0000673
so part of: PD885_RS02260
location: complement(501285..501956)
location: region:501285-501956:-1
so has part: feature:501285-501956:-1:exon

WP_002804057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501285-501956:-1:exon

PD885_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02265
old locus tag: PD885_00454
so part of: sequence
location: complement(501953..502627)
location: region:501953-502627:-1
so has part: feature:501953-502627:-1:exon
subclass of: SO_0000010

61892910
type: Gene
SIO_000068: ncbigene

position:501953:-1
position: 501953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502627:-1
position: 502627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501953-502627:-1:exon

PD885_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02265
old locus tag: PD885_00454
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014504789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpA family protein
translation: MNDEIDIDGESGTPIWAAFGDLMSVLLGAFVLILVGMIGVQLQLSSRLDQEVKQRQAEAQRRKTLEQALAAPLATGRVTLVDGRIGIRGNVLFAFNSDQLQPQGREVLKTLAAPLAQYLRSREEILMVSGFTDDRPVLGGNRRYADNWELSAQRALTVTRALIAEGVPAASVFAAAFGSQQPVDSNADETRRARNRRVEIAPIARLSSSRASSSAQPAPAAATR
SIO_010081: PD885_RS02265
subclass of: SO_0000673
so part of: PD885_RS02265
location: complement(501953..502627)
location: region:501953-502627:-1
so has part: feature:501953-502627:-1:exon

WP_002804059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501953-502627:-1:exon

PD885_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02270
old locus tag: PD885_00455
so part of: sequence
location: complement(502624..505095)
location: region:502624-505095:-1
so has part: feature:502624-505095:-1:exon
subclass of: SO_0000010

61892911
type: Gene
SIO_000068: ncbigene

position:502624:-1
position: 502624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505095:-1
position: 505095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502624-505095:-1:exon

PD885_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02270
old locus tag: PD885_00455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007971565.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF802 domain-containing protein
translation: MFRTLVHVCVFLVGLWAVYWVGIGYLGSNPLGACVAAVIGACYATGALELHRYRQASATLEDAVTALTTAPSALSQWLERLHPSLRNAVRLRIKGERVALPAPVLTPYLVGLLVLLGMLGTLLGMMATLKGTGVALQSATDLQAIRGSLAAPVEGLAFAFGTSIAGVATSAMLGLLSALCRRERLQTMQRLDLKIASELHPHSDAHQRSEAFKLQQQQSALMPALIDRLQALMSNIEQQSIAADARLAAQQAEFYANSEAAYARLATSMEQSLQAGVAESARAVGAALQPAMEATMASIARDTAALHERVTQAVQQQLDGITSGFQHSASNAAEHWSTALAAQERAQQTHNAQLQTTLEQIAQQTTALQDGVSTAVQQQLNALSDGFARSNAATADNWAAVLAEQQRTTQSLSTQLHATLEQLAQQTTAVQDGLHQAVQQQLVGLSTGFQASTAAAAAAWAAAVAEQQRANHALTQELQGTLTQFASTFDARSAALVDAVSKRMDQSGNDTASAWSVALAQQQQASAALASQHQRALAAATASFDTHAAALVGTLQQSHTDLQAALEARDTQRLTLWSERFTAMSAALTAQWEQTDERVTQQQQAICNTLSITASELSTQAHAQASAAITEVARLMQIASEAPKAAADVVAELRQNLSESMARDTAMLEEHSRLLATLDTLLNAVNHASTEQREAVDALVTTSADLLQRVGSQLTEQIGSETGKLGAVAAHVSGSAVEVASLGDAFGMAVQVFSGATGELNERLQHVAAALDASLARSDDQLAYYVAQAREVVDLSMLSQKQIIEELRQLDRGRSDTGEAQTA
SIO_010081: PD885_RS02270
subclass of: SO_0000673
so part of: PD885_RS02270
location: complement(502624..505095)
location: region:502624-505095:-1
so has part: feature:502624-505095:-1:exon

WP_002804061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502624-505095:-1:exon

PD885_RS02275
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02275
old locus tag: PD885_00456
so part of: sequence
location: complement(505106..505843)
location: region:505106-505843:-1
so has part: feature:505106-505843:-1:exon
subclass of: SO_0000010

61892912
type: Gene
SIO_000068: ncbigene

position:505106:-1
position: 505106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505843:-1
position: 505843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505106-505843:-1:exon

PD885_RS02275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02275
old locus tag: PD885_00456
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019301270.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3348 domain-containing protein
translation: MAKVSPRASLSGPAFIRLLARLSDAHLAQSNHALADRLSQWIDWTRAVAVSKALDGKLPDTDDLPEPRPLDVEACTRVRTALATSSVADLDAVVARARDDARTAAQADAPTPVLDYAPFRQHYLTMQRGMRTATGDLRGRLRDLLALVSSDMARLAEVDAVMELTLSPHEQTLLNTVPNLLGAHFERLRDAAYASSPSTDRDAAPRPVSDGWLDVFRKDVQSVLLAELDVRFHPIEGLLAALRTR
SIO_010081: PD885_RS02275
subclass of: SO_0000673
so part of: PD885_RS02275
location: complement(505106..505843)
location: region:505106-505843:-1
so has part: feature:505106-505843:-1:exon

WP_002804063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505106-505843:-1:exon

PD885_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02285
old locus tag: PD885_00458
so part of: sequence
location: complement(507111..507326)
location: region:507111-507326:-1
so has part: feature:507111-507326:-1:exon
subclass of: SO_0000010

61892913
type: Gene
SIO_000068: ncbigene

position:507111:-1
position: 507111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507326:-1
position: 507326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507111-507326:-1:exon

PD885_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02285
old locus tag: PD885_00458
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010365365.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNSRRQSMTVSNQPGKPRLSEQRLAADLEAFQQSGGAIERLGDTPLRREKKRGAPDAAPVAADKPATDAE
SIO_010081: PD885_RS02285
subclass of: SO_0000673
so part of: PD885_RS02285
location: complement(507111..507326)
location: region:507111-507326:-1
so has part: feature:507111-507326:-1:exon

WP_002804065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507111-507326:-1:exon

PD885_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02290
old locus tag: PD885_00459
so part of: sequence
location: complement(507336..507587)
location: region:507336-507587:-1
so has part: feature:507336-507587:-1:exon
subclass of: SO_0000010

61892914
type: Gene
SIO_000068: ncbigene

position:507336:-1
position: 507336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507587:-1
position: 507587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507336-507587:-1:exon

PD885_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02290
old locus tag: PD885_00459
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002804067.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YkgJ family cysteine cluster protein
translation: MVDPSDRIPNHLTSVTPQGWHVMARDEEGWCVAIDAARMCCSIYDTRPAICRRFVMSGAYCRDVRATYDDQRRRGIPLTLYNA
SIO_010081: PD885_RS02290
subclass of: SO_0000673
so part of: PD885_RS02290
location: complement(507336..507587)
location: region:507336-507587:-1
so has part: feature:507336-507587:-1:exon

WP_002804067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507336-507587:-1:exon

PD885_RS21860
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21860
pseudo: true
so part of: sequence
location: <507830..>508194
location: region:507830-508194:1
so has part: feature:507830-508194:1:exon
subclass of: SO_0000010

69055299
type: Gene
SIO_000068: ncbigene

position:507830:1
position: 507830
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:508194:1
position: 508194
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507830-508194:1:exon

PD885_RS21860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002804395.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: PD885_RS21860
subclass of: SO_0000673
so part of: PD885_RS21860
location: <507830..>508194
location: region:507830-508194:1
so has part: feature:507830-508194:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:507830-508194:1:exon

PD885_RS02295
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02295
old locus tag: PD885_00460
so part of: sequence
location: complement(508287..509729)
location: region:508287-509729:-1
so has part: feature:508287-509729:-1:exon
subclass of: SO_0000010

61892915
type: Gene
SIO_000068: ncbigene

position:508287:-1
position: 508287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509729:-1
position: 509729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508287-509729:-1:exon

PD885_RS02295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02295
old locus tag: PD885_00460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002814505.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRPAPVNRPALHGRPSTFAELSDAIRRGTGSPNAETPHPADLELIAQFVDGANKGDAKFGTTIQYAYLLIRFSDWLRQEKKGGLQRVFNDKDKLRSDALTFMKVNKNYSLLSALNHMHDAKSAPHGVVNIRGYRNHKAPDGDAQFIKRAHSVLQDDYASSLRALSAWLHAEGKEGLCETGRLHSQNLMDDAKEFLNTCMAGSAKSVRALRKLRDFCNPGTTDLVQRINRRGIYEVDHQFKEKYKNDLWESSGGKRYADGGTYASAMSSRLGRFTAWLKENKKQPMAWRLHDPTLDRDLDLWTQHRKPKYVSSMKSMLMQVRKMYPPDVQLPDLGGIAEPTGSSYSSMIPRTPEGGWPQAPEGDWNPDMFEDEVTGPSSSAQPEASSYNIPFDWEALYQATTEPQHITEMSQASTLSFDEKDTGPNWKPGTQQVPQWLLQHDVRDNQMVRICGIAYRVFTKQVEADGVNQAKLWLNPEQF
SIO_010081: PD885_RS02295
subclass of: SO_0000673
so part of: PD885_RS02295
location: complement(508287..509729)
location: region:508287-509729:-1
so has part: feature:508287-509729:-1:exon

WP_065975427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508287-509729:-1:exon

PD885_RS21265
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21265
old locus tag: PD885_00462
so part of: sequence
location: 510614..510781
location: region:510614-510781:1
so has part: feature:510614-510781:1:exon
subclass of: SO_0000010

61896437
type: Gene
SIO_000068: ncbigene

position:510614:1
position: 510614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510781:1
position: 510781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510614-510781:1:exon

PD885_RS21265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21265
old locus tag: PD885_00462
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157401.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSISNQMPSAHDQANGHNDAHNDKKKQDTLQDEAAEETFPASDPVSPFVPAKPLD
SIO_010081: PD885_RS21265
subclass of: SO_0000673
so part of: PD885_RS21265
location: 510614..510781
location: region:510614-510781:1
so has part: feature:510614-510781:1:exon

WP_002803050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510614-510781:1:exon

PD885_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02300
old locus tag: PD885_00463
so part of: sequence
location: complement(510869..512032)
location: region:510869-512032:-1
so has part: feature:510869-512032:-1:exon
subclass of: SO_0000010

61892916
type: Gene
SIO_000068: ncbigene

position:510869:-1
position: 510869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512032:-1
position: 512032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510869-512032:-1:exon

PD885_RS02300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02300
old locus tag: PD885_00463
EC number: 1.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016849560.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc-dependent alcohol dehydrogenase
translation: MLALNYHGSRDVRVETVPDPHLVERDDLILRVTATAICGSDLHLYHGKIPDLRPGDILGHEFMGIVEEVGPDVTAVTPGDRVVIPFVVACGRCFHCLLQEFSACETTNSGKGAALNHKDMRPPAALFGFSHLYGGLSGGQAEYVRVPKANVGPLVVPDALHDEQVLFLSDILPTGYQAIVDAGVKQRSTVAIFGAGPVGLMAAACCRMLGAERIFMVDRHAYRLDFASKTYGVIPINFDQIDDPADVIVSQTDGRGVDASIEAVGFEAEGSSIETALTNLKLEGSSGVAIRQCIAATRRCGVVSVPGVYAGFIHAFMFGDAFDKGLTFKMGQTHVQKHMPHLLERIGNGELKPTSIISHRMPLAEAARGYEVFDKKLEDCRKVVLTP
SIO_010081: PD885_RS02300
subclass of: SO_0000673
so part of: PD885_RS02300
location: complement(510869..512032)
location: region:510869-512032:-1
so has part: feature:510869-512032:-1:exon

WP_002803052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510869-512032:-1:exon

PD885_RS02305
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02305
old locus tag: PD885_00464
so part of: sequence
location: 512292..512924
location: region:512292-512924:1
so has part: feature:512292-512924:1:exon
subclass of: SO_0000010

61892917
type: Gene
SIO_000068: ncbigene

position:512292:1
position: 512292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512924:1
position: 512924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512292-512924:1:exon

PD885_RS02305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02305
old locus tag: PD885_00464
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017159347.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4142 domain-containing protein
translation: MEIFKMVTAGAVGYVAYKAWQRRQGQAEDTQNAQGAPHDMHKAPVALGATPPHGDPLRDSVGGARDRKQMLGALAAFNEQERTLAQLAVAKGVEGEVLDFARKMDEAHSAALTDLSRFAPDRNGTLGQAASARSEGTRKRLEDLHGQQFESQYLQASVISHEQALALLDTQLSSEPGSSDLGEELQRARETIAEHLEHAKALRAKQGQPH
SIO_010081: PD885_RS02305
subclass of: SO_0000673
so part of: PD885_RS02305
location: 512292..512924
location: region:512292-512924:1
so has part: feature:512292-512924:1:exon

WP_002803054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512292-512924:1:exon

PD885_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02310
old locus tag: PD885_00465
pseudo: true
so part of: sequence
location: 512971..513167
location: region:512971-513167:1
so has part: feature:512971-513167:1:exon
subclass of: SO_0000010

61892918
type: Gene
SIO_000068: ncbigene

position:512971:1
position: 512971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513167:1
position: 513167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512971-513167:1:exon

PD885_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02310
old locus tag: PD885_00465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005921969.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF3606 domain-containing protein
SIO_010081: PD885_RS02310
subclass of: SO_0000673
so part of: PD885_RS02310
location: 512971..513167
location: region:512971-513167:1
so has part: feature:512971-513167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:512971-513167:1:exon

PD885_RS02315
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02315
old locus tag: PD885_00466
so part of: sequence
location: complement(513309..515060)
location: region:513309-515060:-1
so has part: feature:513309-515060:-1:exon
subclass of: SO_0000010

61892919
type: Gene
SIO_000068: ncbigene

position:513309:-1
position: 513309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515060:-1
position: 515060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513309-515060:-1:exon

PD885_RS02315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02315
old locus tag: PD885_00466
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010365373.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MPDTPVRFLWHYVCQLPWHFGGLLLLIVGAAGCAVCVQYGMKVLVDAMATDRRSQADVWLPLGVFISLIAIENLLWRLGGWLGCRTVVASVVDIRVDLFRHLTGHPMRYFTEHFGGALGNRITALGSASGQIFGGLAWKIVPPIVDFIGAIVLLLTVDWRMAATLVGFIGIVAAIITSFGIRGRAKHQRFAAQAARVGGELVDAVSNVWTIKAFAARDRESARLAEQIGHEAVAHRRSWMYVEKARVIHDLCLSLMAGGMLIWAISMWRASAVSAGDVVLVSALTFRILQGSRDLALTLLDTTQQLGAIADTLHIILQPHAIVDSDAPLALAEGDVRFEQVRFAYPDRAAVLDGLNLHIPAGQKVGIVGPSGAGKSTLIALIQRLDDVESGRVLIDGQDIRSVSQDSLREKIAVVPQETALFNRSIGDNIRYGRPDASDAEVHEAARHAFCDGFIRQLPEGYDTQVGERGVMLSGGQRQRLGIARAFLKDAPILILDEATSALDTESEAEIQAALDHLMRDRTVLAVAHRLSTVIGFDRIVVLQEGRVVEDGDPAQLRGRGGVFDGLWQRQAAGFEQAAPEGL
SIO_010081: PD885_RS02315
subclass of: SO_0000673
so part of: PD885_RS02315
location: complement(513309..515060)
location: region:513309-515060:-1
so has part: feature:513309-515060:-1:exon

WP_040762130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513309-515060:-1:exon

PD885_RS02320
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02320
old locus tag: PD885_00467
so part of: sequence
location: complement(515084..516235)
location: region:515084-516235:-1
so has part: feature:515084-516235:-1:exon
subclass of: SO_0000010

61892920
type: Gene
SIO_000068: ncbigene

position:515084:-1
position: 515084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516235:-1
position: 516235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515084-516235:-1:exon

PD885_RS02320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02320
old locus tag: PD885_00467
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012439377.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHTPTVFESFFMAGFECSSHRRRDGRRLDLIAGTKHDRWAAKDYQAVSAHGLRTVRDGLRWHLIEQRPGHYDWSSFLPMLHAANAAGMQVIWDLCHYGWPDDVDIWTPQFVDRFARFAAAAAQCIKNETDAVPFYAPLNEISFWAWNGGDHAHMHPMGRGRGFELKHQLVRATIAAIDAMRQVEPRARFVQVDPAIHVVPSNDRPGPRREAERLRLAQFEAWDMLFGKQWPGLGGAPQYLDIIGVNYYSDNQWYLGGVPILRSSADHRPFSTIMQEFWQRYRRPMFVAETGAEADQRGPWLEHVGSEVALALQQGVAMEGICLYPVLDYPGWENYRHCPTGLFGYADEHGERPLHAGLAEQLRREHDRFGQRAPQSALADIGT
SIO_010081: PD885_RS02320
subclass of: SO_0000673
so part of: PD885_RS02320
location: complement(515084..516235)
location: region:515084-516235:-1
so has part: feature:515084-516235:-1:exon

WP_002803059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515084-516235:-1:exon

PD885_RS02325
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: glf
locus tag: PD885_RS02325
old locus tag: PD885_00468
so part of: sequence
location: complement(516329..517516)
location: region:516329-517516:-1
so has part: feature:516329-517516:-1:exon
subclass of: SO_0000010

61892921
type: Gene
SIO_000068: ncbigene

position:516329:-1
position: 516329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517516:-1
position: 517516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516329-517516:-1:exon

PD885_RS02325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: glf
locus tag: PD885_RS02325
old locus tag: PD885_00468
EC number: 5.4.99.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005911300.1
GO function: GO:0008767 - UDP-galactopyranose mutase activity [Evidence IEA]
GO process: GO:0009273 - peptidoglycan-based cell wall biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-galactopyranose mutase
translation: MTLSGAAPLANTRTRSSTRRGFDYLIVGAGFAGSVLAERLATGLGKRVLVVDRRPHIGGNAYDFHDDAGVLIHRYGPHIFHTNAQRIVDYLSNFTQWRPYEHRVLAQVGEQQVPIPINMTTLNRLYGLQLTTEEEAAAFLASRAEPVADIQTSEDVVINQVGHALYETFFRGYTRKQWGLDPSQLDKSVTSRVPTRTNDDDRYFTDTFQQMPLHGYTRMFERMLDHPNIKVMLNTCYREIRDELDYDQLVYSGPVDEYFDYCYGKLPYRSLKFEHSTLDQEHFQAVATINYPAEDVAYTRITEYKHLTGQQHPKTSLTREYPSAEGDPYYPIPRAENTELYRRYERLAAETPKVTFLGRLGTYKYYNMDQVVGQALALYKRIEDAEQQRRAEPAM
SIO_010081: PD885_RS02325
subclass of: SO_0000673
so part of: PD885_RS02325
location: complement(516329..517516)
location: region:516329-517516:-1
so has part: feature:516329-517516:-1:exon

WP_002803060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516329-517516:-1:exon

PD885_RS02330
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02330
old locus tag: PD885_00469
so part of: sequence
location: complement(517513..518697)
location: region:517513-518697:-1
so has part: feature:517513-518697:-1:exon
subclass of: SO_0000010

61892922
type: Gene
SIO_000068: ncbigene

position:517513:-1
position: 517513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518697:-1
position: 518697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517513-518697:-1:exon

PD885_RS02330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02330
old locus tag: PD885_00469
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017118546.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 1 protein
translation: MSWAGQFQYAIGKTRRAVASDSAPQFDASRPTLLCLSHLRWSFVYQRPQHLMARFARDFNVLFWEEPIACDEPDPWLQVRGEEGGVHVLVPRLPAGREGDDAVQVQRRLLDGYLAELGVSDLLLWYYTPMSQSFSAHLHPRTIVYDCMDELSAFRGAPPELVQRERELLQRADVVFTGGYSIWEAKRALHANAHAFPSSVDVAHFAAARAPQQEPADQTGIAHPRLGFYGVIDERFDVELLRTIAVQRPQWQFVMIGPVAKIDSADLPQADNIHYLGSKTYDELPGYLSGWDVALMPFAMNASTRFISPTKTPEYLAGGCPVVSTPIHDVVRTYGDSGVVRIADTPDAFVAACETALQDGADREQLFHSADQVLGDMSWDHTYDLMKETLSWMQ
SIO_010081: PD885_RS02330
subclass of: SO_0000673
so part of: PD885_RS02330
location: complement(517513..518697)
location: region:517513-518697:-1
so has part: feature:517513-518697:-1:exon

WP_002803061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517513-518697:-1:exon

PD885_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
gene: galE
locus tag: PD885_RS02335
old locus tag: PD885_00470
so part of: sequence
location: complement(518738..519907)
location: region:518738-519907:-1
so has part: feature:518738-519907:-1:exon
subclass of: SO_0000010

61892923
type: Gene
SIO_000068: ncbigene

position:518738:-1
position: 518738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519907:-1
position: 519907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518738-519907:-1:exon

PD885_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
gene: galE
locus tag: PD885_RS02335
old locus tag: PD885_00470
EC number: 5.1.3.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007969738.1
GO function: GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO process: GO:0006012 - galactose metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-glucose 4-epimerase GalE
translation: MRILVTGGTGYIGSHTCVELARRGHDVCIVDNFSNSSERVLDHLQHLMRFRPEFHRMDVRAPELAELLISKRIDAVLHFAALKAVGESVREPLLYFNNNVTGTLSLLRAMRIAKVSNLVFSSSATVYGDANISPIKESAPLKAINPYGRTKLMMEEMIGDLSAAWPEFNAALLRYFNPVGAHPSGYLGEDPRGVPNNLMPYIAQVAVGRRDTLHVFGDDYPTEDGTGVRDYLHVMDLARAHVDAIDYLQRKRKGLVVNLGTGRGYSVREVAAAFERASGRRIPLRIAPRRDGDVAVYFASTALANRLLGWKAEYDLDRMCRDTWRWQSMYPDGYATSRLPRQRTPATVPEREVARELVAPARRLMLTADGRRRSEPARTLVVADRLSRA
SIO_010081: PD885_RS02335
subclass of: SO_0000673
so part of: PD885_RS02335
location: complement(518738..519907)
location: region:518738-519907:-1
so has part: feature:518738-519907:-1:exon

WP_002803062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518738-519907:-1:exon

PD885_RS02340
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02340
old locus tag: PD885_00471
so part of: sequence
location: complement(520324..521190)
location: region:520324-521190:-1
so has part: feature:520324-521190:-1:exon
subclass of: SO_0000010

61892924
type: Gene
SIO_000068: ncbigene

position:520324:-1
position: 520324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521190:-1
position: 521190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520324-521190:-1:exon

PD885_RS02340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02340
old locus tag: PD885_00471
EC number: 1.1.1.47
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015463646.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose 1-dehydrogenase
translation: MPLPNYPRPPFKPQQQSFPGRTEKMDPRPDHGEDSYVGHGQLKGKRALITGGDSGIGAAVAIAYAREGADVAIAFLPDEQEDAARIGALIEKAGVNALLVGCDISDPSQAAALIDKVNSTFGGLDILVNNAGYQKYFQSFEDITLDEWRKTFDTNVHAVFNLVRLSVPLMTDGGSIINTASVQSKKPTPNILPYAATKGALANLTIGLAGVLAEKNIRVNAVLPGPIWTPFIPSGMDEDSVENFGSQTPMGRPGQPVELASAYVMLASDTASYTSGTLLMISGGAVTL
SIO_010081: PD885_RS02340
subclass of: SO_0000673
so part of: PD885_RS02340
location: complement(520324..521190)
location: region:520324-521190:-1
so has part: feature:520324-521190:-1:exon

WP_002803064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520324-521190:-1:exon

PD885_RS02345
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02345
old locus tag: PD885_00472
so part of: sequence
location: 521421..522062
location: region:521421-522062:1
so has part: feature:521421-522062:1:exon
subclass of: SO_0000010

61892925
type: Gene
SIO_000068: ncbigene

position:521421:1
position: 521421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522062:1
position: 522062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521421-522062:1:exon

PD885_RS02345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02345
old locus tag: PD885_00472
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010379736.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFFRRNGLSLCLLALTLLFIGCQIYAGLHAFNEELTEQGQATLQLAAYLHSPHFMSALFENWESEFLQMGMYVLLTVKLRQVGSAESRPLDPKEETTDIKPGATPWPVRAGGLWRRLYEHSLAIAFGALFLMSFVLHFIGSWRLALLEHAQKDLPPITVLDHFTSASFWFESMQNWQSEFLAVFALVVLTIWLRQKDSPQSKPVQAPHSQTGG
SIO_010081: PD885_RS02345
subclass of: SO_0000673
so part of: PD885_RS02345
location: 521421..522062
location: region:521421-522062:1
so has part: feature:521421-522062:1:exon

WP_002803066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521421-522062:1:exon

PD885_RS02350
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02350
old locus tag: PD885_00473
so part of: sequence
location: 522210..522395
location: region:522210-522395:1
so has part: feature:522210-522395:1:exon
subclass of: SO_0000010

61892926
type: Gene
SIO_000068: ncbigene

position:522210:1
position: 522210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522395:1
position: 522395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522210-522395:1:exon

PD885_RS02350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02350
old locus tag: PD885_00473
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002803068.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGSEPKKPWGPEDDQQKPFTPQEQRNEDVEWKVHDMPDDDPEVNKADPEHDYERPDGSEKR
SIO_010081: PD885_RS02350
subclass of: SO_0000673
so part of: PD885_RS02350
location: 522210..522395
location: region:522210-522395:1
so has part: feature:522210-522395:1:exon

WP_002803068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522210-522395:1:exon

PD885_RS02365
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02365
old locus tag: PD885_00475
so part of: sequence
location: 523252..524532
location: region:523252-524532:1
so has part: feature:523252-524532:1:exon
subclass of: SO_0000010

61892927
type: Gene
SIO_000068: ncbigene

position:523252:1
position: 523252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524532:1
position: 524532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523252-524532:1:exon

PD885_RS02365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02365
old locus tag: PD885_00475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017117241.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-54 dependent transcriptional regulator
translation: MDPLSCAIIDDDVEFCDQVVELATDSGFRAKGIHTLGEASHWLDSNFPDLLVVDVGLPDGSGFDLIERLDPDHTPQIVVVSGDYAYETQGRAQQFGVSEFLTKPFEPERLERVLGGLREAQRGNLGIVGNSDSVVLLRKDIVRVAPTDLNVLVTGETGTGKDLVARAIHRVSGRRGRFVPVNCGAIPEELLASQLFGHERGSFTGADRRHAGFLEQAADGTLFLDEIGEMPKRLQVYLLRAIESRSFMRVGGNEEIPLEARVVAATHQHVQREHAVLREDLFYRLNEYPIQVPPLRERRGDARLLGLRVIDELNVQYGERKLPTKSLLRYLAYHTWPGNVRELRSFIRYLYLRSDGDLLSAPEIEQTVPQADQDGLLIPAGWTMRQAEDAMIEATLARTRFNKKAAARELGISVRTLHNRLSDKDT
SIO_010081: PD885_RS02365
subclass of: SO_0000673
so part of: PD885_RS02365
location: 523252..524532
location: region:523252-524532:1
so has part: feature:523252-524532:1:exon

WP_002803074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:523252-524532:1:exon

PD885_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02370
old locus tag: PD885_00476
so part of: sequence
location: 524532..524774
location: region:524532-524774:1
so has part: feature:524532-524774:1:exon
subclass of: SO_0000010

61892928
type: Gene
SIO_000068: ncbigene

position:524774:1
position: 524774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524532-524774:1:exon

PD885_RS02370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02370
old locus tag: PD885_00476
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002803075.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPDASQGQRRDLLHKLRNRLNVMGFALYAIRNESSKPLETLRSAHQSAVELLNQIGAEERALQHAVDASTKTPHADGSDQ
SIO_010081: PD885_RS02370
subclass of: SO_0000673
so part of: PD885_RS02370
location: 524532..524774
location: region:524532-524774:1
so has part: feature:524532-524774:1:exon

WP_172404506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524532-524774:1:exon

PD885_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02375
old locus tag: PD885_00477
so part of: sequence
location: complement(524768..525151)
location: region:524768-525151:-1
so has part: feature:524768-525151:-1:exon
subclass of: SO_0000010

61892929
type: Gene
SIO_000068: ncbigene

position:524768:-1
position: 524768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525151:-1
position: 525151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524768-525151:-1:exon

PD885_RS02375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02375
old locus tag: PD885_00477
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011038770.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MLDNSLNGRRILVVEDDYLLAESLNDLLMEAGVSVVGPVGNVPDALSLVNSGQAIDGALLDVNVRGQPVFPVADALMERGVPFSFCSGYDRYTLPQRFAHLSYCMKPYNPRTITTLLSNQSKPAEHH
SIO_010081: PD885_RS02375
subclass of: SO_0000673
so part of: PD885_RS02375
location: complement(524768..525151)
location: region:524768-525151:-1
so has part: feature:524768-525151:-1:exon

WP_002803079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524768-525151:-1:exon

PD885_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02380
old locus tag: PD885_00478
so part of: sequence
location: 525362..528916
location: region:525362-528916:1
so has part: feature:525362-528916:1:exon
subclass of: SO_0000010

61892930
type: Gene
SIO_000068: ncbigene

position:525362:1
position: 525362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528916:1
position: 528916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525362-528916:1:exon

PD885_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02380
old locus tag: PD885_00478
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017114624.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CheR family methyltransferase
translation: MTDDESSHDDTAPDPTTHSPLFILGVGAAGLDATRLAELLDAVAGASNLAIMLLLRDRQLLDEQCLRELLGKQATLLVVPKDGDRLQPGRFYLPPSDTLVTLEEGRLRLRTLLDDESDHGLIDSFFVSMAHDQDGNVIGLIMGRFDGDGTLGTAAIKECGGLALVVDDALLQGLDLRSASNPAAITDDILPLPRVAARIAAHMQRHHGFGHPAPVGVRNGSENDKLSQVAGILRNTTGHDFHGYKRATFLRRVQRRMQVVQVETLEQYLEVLRNRFDEPLQLFNDLLIGVTQFFRDRREFEFLEQQVIPRLFQGKHVGDSLRVWVLGCSTGEEAYSLAMLLREHADTVDAAPRIQIFASDIDGRALATARVGRYASSIVGEVSPKRLRRWFVKEGDTYVVSKELRELCVFSQHSIVKDPPFSRLDLVSCRNLLIYLDAELQNRVIPIFHFALKPGGYLFLGNAENVSRHAQLFSPVERSFRVFQRIDADSRVHATFPSLPLAPAGCVPAPPQRQRQRTSSNALVRAGERIADRYAPAYAVLDEHFDVLHFSSQAGRFIRPGSGAPTLNLLNLIHRDLRLDLRSALSRAEVDKSPVHVKGIQVHEDASSWAVDLFVEPTSDSEAPRGYVVLFQEVEAREPVELPVPRESIPDNEHVQVLENELRITRERLQSMIEELESTNEELKSSNEEYQSLNEELQSANEELETSKEELQSVNEEVTTVNGELAHRVQELAHANSDLKNLLESTQIATVFLDNELRVTNFTPAVTDILPLVESDIRRPISDIKMHVDYDELQDDVRRVIRTLAVLDREVENPGTHARYMVRMLPYRTVDNFIGGAVLTFMDVTPLTRAEQALRSSEQRLRTLMEGIPQLVWRSLDGGRWTWSSPQWSSYTGWSDAESLELGWLQAVHPDERELTMKAWQESTSNGELDVEHRLFNAAEHGYRWFHTRGAPVRDERGQVLEWLGTSTESDNLRRLQEEQRVLVSELQHRTRNLITVVQSVAKQTVQTSQNMPEFAGKFEDRLSALSRVQGLLSQSDNIPTTIGALLRMELDALGATPDQQRIMVEGPDVALRKSAVQTLALALHELATNALKHGALAVDTGTLSIRWNVESSGDTPVPVRLVLLWIEEGVNQKLRNDRDNAGGFGRRLIEKALPYSHDAQTRYELSDTRLECEIQLPLNSLQG
SIO_010081: PD885_RS02380
subclass of: SO_0000673
so part of: PD885_RS02380
location: 525362..528916
location: region:525362-528916:1
so has part: feature:525362-528916:1:exon

WP_088057093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525362-528916:1:exon

PD885_RS02385
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02385
so part of: sequence
location: complement(529094..529169)
location: region:529094-529169:-1
so has part: feature:529094-529169:-1:exon
subclass of: SO_0000011

61892931
type: Gene
SIO_000068: ncbigene

position:529094:-1
position: 529094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529169:-1
position: 529169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529094-529169:-1:exon

PD885_RS02385
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 48664
nc RNA class: other
locus tag: PD885_RS02385
product: sX9 sRNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02228
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: PD885_RS02385
subclass of: SO_0000673
so part of: PD885_RS02385
location: complement(529094..529169)
location: region:529094-529169:-1
so has part: feature:529094-529169:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529094-529169:-1:exon

PD885_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02395
old locus tag: PD885_00479
so part of: sequence
location: 529515..530087
location: region:529515-530087:1
so has part: feature:529515-530087:1:exon
subclass of: SO_0000010

61892932
type: Gene
SIO_000068: ncbigene

position:529515:1
position: 529515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530087:1
position: 530087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529515-530087:1:exon

PD885_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02395
old locus tag: PD885_00479
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005911287.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MITRILQLSARAASNAWVEVGVGADADILVADRGGKREERATFGRRAPGQQRSIHMQEPGWLGGVDLAIWETQRCAIPLCGFACTASADGTTAATWLSQNGGAVYAAGLRNVMDIGGRLQMGFSLLVASSVSMPTHRPLCIDGDVGQWLHASGNEAMRHLTPWRLERCTPVAGVRPEWASEERSAQVARV
SIO_010081: PD885_RS02395
subclass of: SO_0000673
so part of: PD885_RS02395
location: 529515..530087
location: region:529515-530087:1
so has part: feature:529515-530087:1:exon

WP_002803083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529515-530087:1:exon

PD885_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02400
old locus tag: PD885_00480
so part of: sequence
location: complement(530344..531243)
location: region:530344-531243:-1
so has part: feature:530344-531243:-1:exon
subclass of: SO_0000010

61892933
type: Gene
SIO_000068: ncbigene

position:530344:-1
position: 530344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531243:-1
position: 531243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530344-531243:-1:exon

PD885_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02400
old locus tag: PD885_00480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002803085.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: manganese catalase family protein
translation: MFMHNKRLMYTVRVAEPNPDLATLMLEQFGGPQGELAAAMRYFTQALGEDDPGRKDLLFDIATEEISHLEVIGSIIAMLNKGPKAVLSEGMEEAMEMRTMTQNSTSHTQQILYGGGPALVNSSGVPWTAAYVDSIGCPTADMRSNIAAEARAKLVYERLITVTDDPGIVDALRFLMTREVAHQKSFEKALYSIEPNFPPGKLPGDPRFTDKYYNNSQGEGDMVGPWNAGEQWEVVTDRELQAAVDGGDGSATVALDTTQTAALDAMSMRLLSNPELDRVTGADLGAGPGAGSTTGDIQR
SIO_010081: PD885_RS02400
subclass of: SO_0000673
so part of: PD885_RS02400
location: complement(530344..531243)
location: region:530344-531243:-1
so has part: feature:530344-531243:-1:exon

WP_002803085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:530344-531243:-1:exon

PD885_RS02405
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02405
old locus tag: PD885_00481
so part of: sequence
location: complement(531381..531887)
location: region:531381-531887:-1
so has part: feature:531381-531887:-1:exon
subclass of: SO_0000010

61892934
type: Gene
SIO_000068: ncbigene

position:531381:-1
position: 531381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531887:-1
position: 531887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531381-531887:-1:exon

PD885_RS02405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02405
old locus tag: PD885_00481
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002803088.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferritin-like domain-containing protein
translation: MAIKTVEELFIHELSDIYSAEKQLTKSLPRLASAATEPKLKQAFELHLEETQGQIERIDQVVEALGIKLKRIKCAAMEGLVEESREVIEEIEAGPVRDAALIGGAQKVEHYEIASYGTIAAMAKQLGYADALPLLLATLEEEKATDQKLTSLAEQGGNEKASKASKAA
SIO_010081: PD885_RS02405
subclass of: SO_0000673
so part of: PD885_RS02405
location: complement(531381..531887)
location: region:531381-531887:-1
so has part: feature:531381-531887:-1:exon

WP_002803088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531381-531887:-1:exon

PD885_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02410
old locus tag: PD885_00482
pseudo: true
so part of: sequence
location: complement(531931..532461)
location: region:531931-532461:-1
so has part: feature:531931-532461:-1:exon
subclass of: SO_0000010

61892935
type: Gene
SIO_000068: ncbigene

position:531931:-1
position: 531931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532461:-1
position: 532461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531931-532461:-1:exon

PD885_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02410
old locus tag: PD885_00482
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012439361.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF892 family protein
SIO_010081: PD885_RS02410
subclass of: SO_0000673
so part of: PD885_RS02410
location: complement(531931..532461)
location: region:531931-532461:-1
so has part: feature:531931-532461:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:531931-532461:-1:exon

PD885_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02420
old locus tag: PD885_00483
so part of: sequence
location: 532940..534535
location: region:532940-534535:1
so has part: feature:532940-534535:1:exon
subclass of: SO_0000010

61892936
type: Gene
SIO_000068: ncbigene

position:532940:1
position: 532940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534535:1
position: 534535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532940-534535:1:exon

PD885_RS02420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02420
old locus tag: PD885_00483
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002803093.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: APC family permease
translation: MSEQTLHRDVGPFALMLTGLGSIIGSGWLFGAWRAAGLAGPGAIWAWILGAAIITTIALSYAELGAMFPESGGMVRYSHYSHGSLVGFIAGWANWIAIVSVIPVEAEASVQYMASWPWAWAQGLYAHAPGGAGELSVPGLLISAALVLVYFFLNFWSVKLFARSNTLITVFKLVVPAATGVALIASGFHTENFSVGVDGGTHLLDLAAILTAVATAGIVFSFNGFQSPVNLAGEARNPGRSIPFAVLGSIALATVVYVVLQVAYIGAVPPDLLAKAGWHGIDFRSPFAELAIIVNLHWLAMLLYIDAFVSPSGTGITYTATTARMVYGMEKNGTMPSVLGKLHPVWGVPRMAMFFNLAVSFVFLFFFRGWGTLAAVISVATIISYLTGPISAMALRRHAPELHRPLRIAALPVLAGVAFVMATELLYWARWPLTGEIILLMVVALPVYCYYQAKQGWPDLRRNLKGAAWMICYLPVVALLSWAGSSHFGGQGYLGYGTDLAAVAAVGLVFYIWGVRSGWRTPSVEKAVAQA
SIO_010081: PD885_RS02420
subclass of: SO_0000673
so part of: PD885_RS02420
location: 532940..534535
location: region:532940-534535:1
so has part: feature:532940-534535:1:exon

WP_002803093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532940-534535:1:exon

PD885_RS02425
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02425
old locus tag: PD885_00484
so part of: sequence
location: complement(534626..535225)
location: region:534626-535225:-1
so has part: feature:534626-535225:-1:exon
subclass of: SO_0000010

61892937
type: Gene
SIO_000068: ncbigene

position:534626:-1
position: 534626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535225:-1
position: 535225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534626-535225:-1:exon

PD885_RS02425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02425
old locus tag: PD885_00484
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017118539.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIALFQGLGLLLQDNALHRRSFDEQVAYWRDKTDQQLDEELTLLGVAKKQWVIASIIGWQTISLVLLGVITHQLWQNDYHLTFSRVVIIFTSWASILFIMWYIADLFDHSAGFERWLRAFNSRARVTPDADSVECVADALEMTRRYPEVLRYKQEVTSRRELRHEDIVNMREMGRLRRYTELLRDLDRFDGAPRLVVNS
SIO_010081: PD885_RS02425
subclass of: SO_0000673
so part of: PD885_RS02425
location: complement(534626..535225)
location: region:534626-535225:-1
so has part: feature:534626-535225:-1:exon

WP_040762132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534626-535225:-1:exon

PD885_RS02430
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02430
old locus tag: PD885_00485
so part of: sequence
location: 535685..536611
location: region:535685-536611:1
so has part: feature:535685-536611:1:exon
subclass of: SO_0000010

61892938
type: Gene
SIO_000068: ncbigene

position:535685:1
position: 535685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536611:1
position: 536611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535685-536611:1:exon

PD885_RS02430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02430
old locus tag: PD885_00485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019301243.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxygenase MpaB family protein
translation: MSAVLRALTAPAAEQIRRWVLGAFPRGQSSIEYDQPLGDAGIFGPDSVTWRVHSEFPGMLSGGLCALMLQLLHPRALAGVYDHSNFRADLTGRLRRTTNFVAGTTYAPRGEAEQLIARVCNIHSHIRGHTADGVPYDANDPELLTWVHVTEAYGFLQGCRRYCREVPTAIADRYYDEARRVAEALGATDVPAGQAQVDAYFANVRGQLCMDARSREVLDILTSIQLPVPAAGLSRGVFLGAGTALLPSWASDMLGRTTTQRAQARASARLLRSLSPLFRTALRDGLSARACRRMQLPPAILLKWPEEV
SIO_010081: PD885_RS02430
subclass of: SO_0000673
so part of: PD885_RS02430
location: 535685..536611
location: region:535685-536611:1
so has part: feature:535685-536611:1:exon

WP_040762124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535685-536611:1:exon

PD885_RS02435
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02435
old locus tag: PD885_00486
so part of: sequence
location: complement(536696..538765)
location: region:536696-538765:-1
so has part: feature:536696-538765:-1:exon
subclass of: SO_0000010

61892939
type: Gene
SIO_000068: ncbigene

position:536696:-1
position: 536696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538765:-1
position: 538765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536696-538765:-1:exon

PD885_RS02435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02435
old locus tag: PD885_00486
EC number: 3.4.24.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017167581.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M13 family metallopeptidase
translation: MSAALLTTAACHRDSAAPAKNAHIKPAPSAPKLGDFGFDVAGMDRSVVPGDDFFSYASGNWVKTTQIPEDRSSFNSFVGIAIETERHSRDIIEGAAANDHVTGEDKQIGDYYAAYMDEASIEVKGVRPVQPELDAIAQLDDKQALARILGSQLRTDVDLLNATNFHTDHLFGLWVSQDLHHPGRYVPYLVQGGLGMPDRSFYLDDGRMTQLREAYRAHIVKLLKLAGIGDAPAKAERILMLETAMARVHATAEQTNNVQAGANAWTQADFPPKAPGLDWALFFEAAGLKAQQDFIVWQPQAVSGLSALVHSESLQAWKDYLSFRALDRASPYLSKAFADERFAFYGTTLEGTPQQRQRWKRAIDATNAALGEAVGKRYVQKYVSAQTKTRAEKMVKNIVTAFGKRIDALEWMTPDTKQRAKAKIAGLTVAVGYPDSWRDYSGLDVRRDDALGNEERATLFEYRRNLTKLGKAVDRREWYMLPQEVNALNVPLENRLIFPAAILQPPFFDPAADDAVNYGAIGAVIGHEISHSFDNMGALFDEHGELHNWWTPQDLKKFQIAGNALAAQFSAYKPFEDLSVNGKLTLGENIADVAGLDTAYDAYQLSLQGKQPQTIDGFSPDQRFFLGFAQAWRGKYRDAALRNAVLTDVHAPVRFRAQTVRNLDAWYRAFDVKQGEQLYLAPTQRVKIW
SIO_010081: PD885_RS02435
subclass of: SO_0000673
so part of: PD885_RS02435
location: complement(536696..538765)
location: region:536696-538765:-1
so has part: feature:536696-538765:-1:exon

WP_002803097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536696-538765:-1:exon

PD885_RS02440
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02440
old locus tag: PD885_00487
so part of: sequence
location: complement(538916..539611)
location: region:538916-539611:-1
so has part: feature:538916-539611:-1:exon
subclass of: SO_0000010

61892940
type: Gene
SIO_000068: ncbigene

position:538916:-1
position: 538916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539611:-1
position: 539611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538916-539611:-1:exon

PD885_RS02440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02440
old locus tag: PD885_00487
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008573318.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MLSFVIPAHDEAALIGDTLQCLHACAQTLQLDYEAIVVADACDDDTAAMARRHGAQVLEVQLRHIAATRNAGAQLARGDRLLFLDADTLINPQVVGAALVALDAGAVGGGAQVHLHGKRVWYERVAQALFGWFFRTSGIAPGCFLFCTRIAFVSAGGFDTRYYAGEDVALSRALARCGRFVILRQTVHTSDRKLRSFSKREHLGLLLRFLWHGRRMLQTRDALGFWYQRRR
SIO_010081: PD885_RS02440
subclass of: SO_0000673
so part of: PD885_RS02440
location: complement(538916..539611)
location: region:538916-539611:-1
so has part: feature:538916-539611:-1:exon

WP_002803098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538916-539611:-1:exon

PD885_RS02445
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02445
old locus tag: PD885_00488
so part of: sequence
location: complement(539717..540712)
location: region:539717-540712:-1
so has part: feature:539717-540712:-1:exon
subclass of: SO_0000010

61892941
type: Gene
SIO_000068: ncbigene

position:539717:-1
position: 539717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540712:-1
position: 540712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539717-540712:-1:exon

PD885_RS02445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02445
old locus tag: PD885_00488
EC number: 1.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007972965.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldo/keto reductase
translation: MHTRTLGRSGPTVSALGLGCMGMSAFYGDRSDEAASIAVIHHALDHGISLLDTADMYGPHTNEVLVGKAIASRRHEVFLATKFGIKLDSNDPSVRGIDGSPDYVQSACEASLHRLGVEHIDLYYQHRVDPNVPIEDTVGAMSRLVEQGKVRFLGLSEAAAATIRRAHAVHPITAVQTEYSLWSREPEDNGVFAAVRELGIGFVPYSPLGRGFLTGAFSSPGDFDADDYRRHSPRFQGENFTRNLQLVEQVKAIATDKGITPGQLALAWVLAQGQDLVPIPGTKRLAYLEENIGALDVALMPDELARIDAIFPPQAASGTRYPEAMMRAVDR
SIO_010081: PD885_RS02445
subclass of: SO_0000673
so part of: PD885_RS02445
location: complement(539717..540712)
location: region:539717-540712:-1
so has part: feature:539717-540712:-1:exon

WP_002803099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539717-540712:-1:exon

PD885_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02450
old locus tag: PD885_00489
so part of: sequence
location: 540924..542168
location: region:540924-542168:1
so has part: feature:540924-542168:1:exon
subclass of: SO_0000010

61892942
type: Gene
SIO_000068: ncbigene

position:540924:1
position: 540924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542168:1
position: 542168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540924-542168:1:exon

PD885_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02450
old locus tag: PD885_00489
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017167194.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative DNA modification/repair radical SAM protein
translation: MKILDKLAILADAAKYDASCASSGANKRNSLGTGGIGSTEGMGICHSYTPDGRCVSLLKILLTNFCVFDCSYCVNRVSSNVRRARFTPEEVVTLTLDFYKRNYIEGLFLSSGIIRNSDYTMEQLVEVARQLREVHHFAGYIHLKTIPDATPELLAAAGRYADRLSINVELPTEQGLTLLAPEKSVGGIRSAMGELRWRIEENQLERKAEKVRRAKPPRFAPAGQSTQMIVGADDANDRSILDTSHTLYGNYRMRRVYYSAFSPIPDASSKLPLQPPPLQREHRLYQADWLLRFYAFSVEEIAPANSSGMLDLDVDPKLAWALRNPERFPVDLNAAPREMLLRVPGLGTRNVERLLLSRRHARLRVGDLVRLRVPMKKLLPFVSVLDHHPRQRLDDPARLRAQLAPAPRQAGLFD
SIO_010081: PD885_RS02450
subclass of: SO_0000673
so part of: PD885_RS02450
location: 540924..542168
location: region:540924-542168:1
so has part: feature:540924-542168:1:exon

WP_002803100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540924-542168:1:exon

PD885_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02455
old locus tag: PD885_00490
so part of: sequence
location: 542439..543875
location: region:542439-543875:1
so has part: feature:542439-543875:1:exon
subclass of: SO_0000010

61892943
type: Gene
SIO_000068: ncbigene

position:542439:1
position: 542439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543875:1
position: 543875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542439-543875:1:exon

PD885_RS02455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02455
old locus tag: PD885_00490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010365450.1
note: This protein belongs to the uracil DNA glycosylase superfamily, members of which act in excision repair of DNA. However, it belongs more specifically to UdgX branch, whose founding member was found to bind uracil in DNA (where it does not belong), without cleaving it, appears to promote DNA repair by a pathway involving RecA, rather than base excision; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UdgX family uracil-DNA binding protein
translation: MFSAEVEPVWSFDSWRALARAGWRAKVEPDSIAWNGGAQGGLLMGPGVLDLPAVLAAPRVSAEFLQMAGAVVCHRDPQRYAVLYRLLWRLASGERALLERATDVDVHRVVQWQKTVQRDSHKMKAFVRFRRLPGDEEDFMAWFEPEHWIVDRVAPFFARRFAGMRWAILTPYRSVRWDGEALTFGEGAVRTQVPADDAQETLWRTYYAHIFNPARLNPTIMRQEMPQKYWKNLPEATFLPELIRKAGVRVREMAERAPEPVRRRVPLAPTPVPEVATQSLAQLRVAARDCRRCELWQPATQTVFGEGPNDASVMVIGEQPGDEEDLSGRPFVGPAGRLFNMALGELGVDRETFYVTNAVKHFRFEQRGKRRLHRNPERSHMQACSGWLLAERAQLRPAQIVCLGAIAAQAVLGKGFRLMQERGQWQRLDDGTPVLTTVHPSWVLRQPSAAREEGYRGFVEDLRQLLDPPMPVERSIGA
SIO_010081: PD885_RS02455
subclass of: SO_0000673
so part of: PD885_RS02455
location: 542439..543875
location: region:542439-543875:1
so has part: feature:542439-543875:1:exon

WP_002803101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542439-543875:1:exon

PD885_RS02460
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02460
old locus tag: PD885_00491
so part of: sequence
location: complement(544315..544872)
location: region:544315-544872:-1
so has part: feature:544315-544872:-1:exon
subclass of: SO_0000010

61892944
type: Gene
SIO_000068: ncbigene

position:544315:-1
position: 544315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544872:-1
position: 544872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544315-544872:-1:exon

PD885_RS02460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02460
old locus tag: PD885_00491
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003489588.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fasciclin domain-containing protein
translation: MKTSFQSLAVAAAIALTSAMAPAYAASNPMVGGAPMLATKDIVDNAVNSKDHTTLVAAVKAAGLVDTLKGPGPFTVFAPTNEAFAALPSGTVETLLKPASKPNLTKVLTYHVVPGKVDAASLIAKIKAGGGSATLTTVQGEPLTAKLKGKKVTITDVKGNTANVTIADVMQSNGVIHVVDKVLMP
SIO_010081: PD885_RS02460
subclass of: SO_0000673
so part of: PD885_RS02460
location: complement(544315..544872)
location: region:544315-544872:-1
so has part: feature:544315-544872:-1:exon

WP_002803102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544315-544872:-1:exon

PD885_RS02465
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02465
so part of: sequence
location: complement(545226..546030)
location: region:545226-546030:-1
so has part: feature:545226-546030:-1:exon
subclass of: SO_0000010

61892945
type: Gene
SIO_000068: ncbigene

position:545226:-1
position: 545226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546030:-1
position: 546030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545226-546030:-1:exon

PD885_RS02465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002802850.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MTRRKEIPIALWKRIEPLIPQVKRSPKGGRPRISDQQALNGIVYVLRTGVPWEDLPMELGYGSGMTCWRRLRDWQAAGVWHRLHQVLLAELCRAQTLDLSRAGLDAASVASPPGGPYTGPNPTDRGKLGSKRHLIVDRNGIPLAVCVTGANRHDSVVFEELIDALPPIGGKPGRPRRWPDKLHADKAYDIDRCRAFLKQRGIIARIARKGIARNHRLGRHRWVVERTHAWFAGMGKLRIRFERRIDLHLALLSLACSIICLRLLPGFC
SIO_010081: PD885_RS02465
subclass of: SO_0000673
so part of: PD885_RS02465
location: complement(join(545226..545700,545699..546030))
location: region:545226-546030:-1
so has part: feature:545699-546030:-1:exon
so has part: feature:545226-545700:-1:exon

WP_088056625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:545699-546030:-1:exon

position:545699:-1
position: 545699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:545226-545700:-1:exon

position:545700:-1
position: 545700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PD885_RS02470
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02470
old locus tag: PD885_00493
so part of: sequence
location: 546101..546742
location: region:546101-546742:1
so has part: feature:546101-546742:1:exon
subclass of: SO_0000010

61892946
type: Gene
SIO_000068: ncbigene

position:546101:1
position: 546101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546742:1
position: 546742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546101-546742:1:exon

PD885_RS02470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02470
old locus tag: PD885_00493
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSGNSEFSRSMMRAWLVAVALTSFATAQAVAATPTPTSAPTAAAPARVTYRPGQTWVVPDEWEFTVNSARVANVKIHDDGGGSWHPTQVILLSYSYKNIGFDDSANYKGGGPSTLAFSKAHIEVVDANDAHNGGAGNYPVRIKLVEDATGQAVGQQMVGAQWPYAFEKKPKAVKATVSHYDSKLTLHKATFLVPVEVTRQSMPHAKTHVHRT
SIO_010081: PD885_RS02470
subclass of: SO_0000673
so part of: PD885_RS02470
location: 546101..546742
location: region:546101-546742:1
so has part: feature:546101-546742:1:exon

WP_231892686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546101-546742:1:exon

PD885_RS02475
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02475
so part of: sequence
location: complement(547176..547412)
location: region:547176-547412:-1
so has part: feature:547176-547412:-1:exon
subclass of: SO_0000010

61892947
type: Gene
SIO_000068: ncbigene

position:547176:-1
position: 547176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547412:-1
position: 547412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547176-547412:-1:exon

PD885_RS02475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02475
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNLEEETAARAVSHIATPNNTAMGPYRFAIGDETTAPLWPARGAARRTAMRALDPISVLVLVDQTLLDTQPNGKATR
SIO_010081: PD885_RS02475
subclass of: SO_0000673
so part of: PD885_RS02475
location: complement(547176..547412)
location: region:547176-547412:-1
so has part: feature:547176-547412:-1:exon

WP_002803111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547176-547412:-1:exon

PD885_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02480
old locus tag: PD885_00494
so part of: sequence
location: 547411..549048
location: region:547411-549048:1
so has part: feature:547411-549048:1:exon
subclass of: SO_0000010

61892948
type: Gene
SIO_000068: ncbigene

position:547411:1
position: 547411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549048:1
position: 549048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547411-549048:1:exon

PD885_RS02480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02480
old locus tag: PD885_00494
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014504747.1
GO function: GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO process: GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006885 - regulation of pH [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Na+/H+ antiporter
translation: MHSIDVVLAMLLAVAASGYLIRILPFLLPLPLVQIALGAVVSGVFDAGHELEPELFFLLFLPPLLFLDGWRIPKQGLFRDKAAILELALGLVVFTVVGAGLLIHWLIPAMPQAVAFALAAIISPTDPVAVSSIASKVRIPRRLKHILEGESLLNDASGLVCFQFAVAAVLTGTFSIATASLTFLWMALAGLALGVATTFGLSRIQAWIWRHFGEEPGSAILVNLLTPFAAYLLAEAFHASGILAAVAAGVTMSYVEMAGNAPGNMRLQRSAVWDTVQFTFNGIIFVLLGEQLPGILDGAVRSVQQAGHVNPWWLAVYVLTISTSLMALRFVWVFLSLRWNIFKAQRRGEQHVSPPWRIVVAVSLAGVRGAITLAGVLTLPLMLEDGSPFPARQLAIFLAASVILVSLLVASVALPRLLRGLELPEEEDEQLKEELAVKAASQAALEAVEKLRQRLVEGSKHAERYNAAANQVSQRYQRKLGAVDMAETDPEEACAYEQALCQFRHAALMAERNELFKLARRHEISDDLSRRLVRNLDLIESRKRA
SIO_010081: PD885_RS02480
subclass of: SO_0000673
so part of: PD885_RS02480
location: 547411..549048
location: region:547411-549048:1
so has part: feature:547411-549048:1:exon

WP_002803113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547411-549048:1:exon

PD885_RS21865
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21865
old locus tag: PD885_00495
so part of: sequence
location: complement(549124..549687)
location: region:549124-549687:-1
so has part: feature:549124-549687:-1:exon
subclass of: SO_0000010

69055300
type: Gene
SIO_000068: ncbigene

position:549124:-1
position: 549124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549687:-1
position: 549687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549124-549687:-1:exon

PD885_RS21865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21865
old locus tag: PD885_00495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011346760.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDNHELASAQGKLEETIKVILMVHSEMAQRETGMSASFNQQIQSLQHQVSQFRREVSGIVSGASTQIAQEAREAVSPVAAEYDRAVSVTSARLQWANKTVWIWFGAASSILILVMLIGWRLLGYYGRELSAAKEELQRYEKAVPIVQAFYASDAVICGGRICSNDDPKGEQAGDKRQYRQAKPRPQK
SIO_010081: PD885_RS21865
subclass of: SO_0000673
so part of: PD885_RS21865
location: complement(549124..549687)
location: region:549124-549687:-1
so has part: feature:549124-549687:-1:exon

WP_002803115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:549124-549687:-1:exon

PD885_RS02490
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02490
so part of: sequence
location: complement(549723..550301)
location: region:549723-550301:-1
so has part: feature:549723-550301:-1:exon
subclass of: SO_0000010

61892950
type: Gene
SIO_000068: ncbigene

position:549723:-1
position: 549723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550301:-1
position: 550301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549723-550301:-1:exon

PD885_RS02490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02490
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRIDPNAPLLRPAQADVQAFQAAANTPISVVPINKQDSQQLFTNQATIVTPMIALRSIEITSGVDTGESHLATDAYSISNKPIDPMPSNHATFLPPLISAADERVRDTSEDRQTPWSVKGLFDDPFINRTHAALIAGDSNELDRIAIDFSQSCEGLAMAQRSDQLLAEQQEQQRLQEQQHTQTRQGPTMSM
SIO_010081: PD885_RS02490
subclass of: SO_0000673
so part of: PD885_RS02490
location: complement(549723..550301)
location: region:549723-550301:-1
so has part: feature:549723-550301:-1:exon

WP_065975424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:549723-550301:-1:exon

PD885_RS02495
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02495
old locus tag: PD885_00496
so part of: sequence
location: 550375..551343
location: region:550375-551343:1
so has part: feature:550375-551343:1:exon
subclass of: SO_0000010

61892951
type: Gene
SIO_000068: ncbigene

position:550375:1
position: 550375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551343:1
position: 551343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550375-551343:1:exon

PD885_RS02495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02495
old locus tag: PD885_00496
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MQLTFGDAEGLGKRKQTRREIFLAEMEQVVPWRHLLGLIAPHYPVSGRPGRQPYALATMLRIHLLQQWYALSDPAMEEALHEIRTLRRFARLGGLDNVPDETTILNFRRLLETHGLAARMLEAVNADLVRKGQSLRSGTIVDATLIAAPSSTKNTDRARDPEMHQTKKGNQWYFGMKAPIGVDEFSGLVHHVRCTAANVADVTVTHALLHGKEDSVFGDSGYTGADKREELQTCKAGFFIAAKRSTIQAIGNKRERRQEERWEYFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAHVLTLFALSNLWMVRRQLLPARG
SIO_010081: PD885_RS02495
subclass of: SO_0000673
so part of: PD885_RS02495
location: 550375..551343
location: region:550375-551343:1
so has part: feature:550375-551343:1:exon

WP_002807946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:550375-551343:1:exon

PD885_RS21870
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21870
old locus tag: PD885_00497
so part of: sequence
location: complement(551996..553198)
location: region:551996-553198:-1
so has part: feature:551996-553198:-1:exon
subclass of: SO_0000010

69055301
type: Gene
SIO_000068: ncbigene

position:551996:-1
position: 551996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553198:-1
position: 553198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551996-553198:-1:exon

PD885_RS21870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21870
old locus tag: PD885_00497
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002802467.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPGFNTLYPADKELIGEFLDAAEKGKKKFFTIRAYTNVLVHFSEWLQNQSKPDLRRRLRTDKNALNSDAKIFRETLNQDHLPAALTHLRRMLSRTDRTVKPASRRRHEAADGDKELIKEALSASPQYASVLRAFSKWLHAQKKDPLCKPGRLKSETLTDDVRAFVRTGMTGSEKLGPALRQLQIFKSNGKTDLAKRRSTRDILPDDDQLSEQYKAHLWESSGGKIYKNNETYAGKTSAYLRHFSAWLKANNKRTIASRLHDQTLDDDLDLYMDGKGATQRSHIIDMLTRVRAMVTTDVQPPNVQTHDLGNRAEPSGSSYSPLFPPTPSGGRPQLPHNWDLNMPAEEELAGPSGSAQSEPSSSTLAFNRDALHPEATGPQRTTAMSQASLPTFNEDDTGPN
SIO_010081: PD885_RS21870
subclass of: SO_0000673
so part of: PD885_RS21870
location: complement(551996..553198)
location: region:551996-553198:-1
so has part: feature:551996-553198:-1:exon

WP_002802464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:551996-553198:-1:exon

PD885_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02505
old locus tag: PD885_00498
so part of: sequence
location: complement(554265..556004)
location: region:554265-556004:-1
so has part: feature:554265-556004:-1:exon
subclass of: SO_0000010

61892952
type: Gene
SIO_000068: ncbigene

position:554265:-1
position: 554265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556004:-1
position: 556004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554265-556004:-1:exon

PD885_RS02505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02505
old locus tag: PD885_00498
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRSTKSSNRRTHAQSTYQSVPEQATGQVASLGAGPSGMLSSSTPPGVLSELAARPNKRRRTEASAVRSAPGSGVHPARSGTSRPFPFALEHDNLPPNSHLHHPKLSRADAPEPQGTTAQQPASKHVAVHKERRAPVDRPSTSGDRRSEFAQLRDKIRSATGPSSFNALCPADQGLIEQFIKGIEKAQSNVNTARSYIYLLIRFSNWLRDEKKAGLPDRFLKNQDGLKLDVHGLKPDVLSFQNGKKTNRLNAALNHLNIMVSDKDGTVKIRDYSHHEAHGGDEKFITNALSAYPDYASTLRALSAWLHAQNKEGLCEPGRLHSKTLMHEAEAFANTRMASSEKSVSALRKLQKFYLSGETDFVKRHSPRKIPEADRQLREKYKKALWESSRGKTYYNQQSYAEKTSSRMIPFSAWLDDKAKATMASRLHDSTLDDDLALYTSEGNSQHVGSMKGMLKKMREMLPLNAQSPDLGGRAEPSGPSYPSMVAPTHSGDQPQTSHSWDLNISAAEELAGPSGSAPPEPQAPQRSWDLNMPAAEVSGASWSAFAFDRDARYPDATGSQRTTAMSQASLPTFDEDDA
SIO_010081: PD885_RS02505
subclass of: SO_0000673
so part of: PD885_RS02505
location: complement(554265..556004)
location: region:554265-556004:-1
so has part: feature:554265-556004:-1:exon

WP_231892685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:554265-556004:-1:exon

PD885_RS02510
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02510
old locus tag: PD885_00499
so part of: sequence
location: 556427..557233
location: region:556427-557233:1
so has part: feature:556427-557233:1:exon
subclass of: SO_0000010

61892953
type: Gene
SIO_000068: ncbigene

position:556427:1
position: 556427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557233:1
position: 557233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556427-557233:1:exon

PD885_RS02510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02510
old locus tag: PD885_00499
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002801519.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MKPRKPYSTDISDEEWAFAAPYLTLMDVQAPQRKYELRAMFNALRWIARAGAPWRLLPNDFPPWEAVYQQTQRWLQAGCFEAMVSDLRSLLRVAQGKKGQPSAVIFDARTLQSTCESGPRAGYDGYKRKKGSKVHMAVDTLGHLLAVQVTPANEQERAQVRSLAQEVQHVTGETVKIAFVDQGYTGQEPAQAATEEGIELQVIKLQEAKKGFVLLPRRWVVERSFGWANRFRRLARDYERLPETLAGLHFVVFTILMLGNAATLFQSS
SIO_010081: PD885_RS02510
subclass of: SO_0000673
so part of: PD885_RS02510
location: 556427..557233
location: region:556427-557233:1
so has part: feature:556427-557233:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:556427-557233:1:exon

PD885_RS21875
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS21875
old locus tag: PD885_00500
so part of: sequence
location: complement(557637..558965)
location: region:557637-558965:-1
so has part: feature:557637-558965:-1:exon
subclass of: SO_0000010

69055302
type: Gene
SIO_000068: ncbigene

position:557637:-1
position: 557637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558965:-1
position: 558965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557637-558965:-1:exon

PD885_RS21875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS21875
old locus tag: PD885_00500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002802464.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAQRSRLFAKLKDKMQSGTGPSGFDKLCRADKELITEFVEGAEKGEGSFTTVNGYLSVLINFGKWLSQENKGSLQSFVSKDKNTQTADTSNFQKWTKGARLAAALTHLRQVASPTHEPIKIRSYSRHKATEGDEAFINNALSTMPDYAASLRGLSEWLYINRKEPLCKPGRLHSQALRDDAKAFATTRLGGSQKAVRALWQLETFYDTGKTDVVKRLNTRNLPKDDQQLIEQYKHKLWVASDGKTYPNKETYAGKKSSYARRFSAWLQAQGKDSMASRLHDPTLDTDLDLYKATKESIYHCDIISMLRQVREMPTPNVQPPGLGSSAEPSGSSYPSMVAPTHSGGAPQTSHSWDLNISAEELVGPSGSAPPEPQAPQRSWDLNMPAAEVSGASGSAQSEPSSSTLAFNRDALHPEATGPQRTTAMSQASLPTFNEDDTGPN
SIO_010081: PD885_RS21875
subclass of: SO_0000673
so part of: PD885_RS21875
location: complement(557637..558965)
location: region:557637-558965:-1
so has part: feature:557637-558965:-1:exon

WP_231892684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:557637-558965:-1:exon

PD885_RS02520
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02520
old locus tag: PD885_00501
so part of: sequence
location: 559806..560825
location: region:559806-560825:1
so has part: feature:559806-560825:1:exon
subclass of: SO_0000010

61892954
type: Gene
SIO_000068: ncbigene

position:559806:1
position: 559806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560825:1
position: 560825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559806-560825:1:exon

PD885_RS02520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 48664
locus tag: PD885_RS02520
old locus tag: PD885_00501
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017166368.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MoxR family ATPase
translation: MNAPPLLPPEAAAAPSEDRLHRQFTLLRESLAQRIVGQSALVERLLIALLADGHLLVEGAPGLAKTTAIRALASRLEADFARVQFTPDLLPADLTGTEIWRPQDSRFEFMPGPIFHPILLADEINRAPAKVQSALLEAMGERQVTVGRHTYALPQLFLVMATQNPIEQEGTFPLPEAQLDRFLMHVRIGYPQADAEAEILRLAREAARDTLEKHETVPDKIPLEDIFAARRVVLDVHLAPQLERYLIEIVLASRDAQRYDPALARRIAWGASPRGSIALERCARARAWLAGRDYVTPDDIRAIAPDVLRHRVLPSYEATAEGWDGERLVAALLEKIPLP
SIO_010081: PD885_RS02520
subclass of: SO_0000673
so part of: PD885_RS02520
location: 559806..560825
location: region:559806-560825:1
so has part: feature:559806-560825:1:exon

WP_002802468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559806-560825:1:exon

PD885_RS02525
type: Gene
subclass of: SO_0000704
RO_0002162: 48664
locus tag: PD885_RS02525
old locus tag: PD885_00502
so part of: sequence
location: 560848..561810
location: region:560848-561810:1
so has part: feature:560848-561810:1:exon
subclass of: SO_0000010