Babesia bovis T2Bo mitochondrion, complete genome.
type: Entry
definition: Babesia bovis T2Bo mitochondrion, complete genome.
sequence version: NC_009902.1
sequence date: 2023-04-14
sequence: sequence
division: INV
label: NC_009902.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Babesia bovis T2Bo
organism: Babesia bovis T2Bo
taxonomy: Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida; Babesiidae; Babesia.
reference: 1
references: 17953480
reference: 2
reference: 3
comment: PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence was derived from EU075182.\n\nOn Nov 11, 2009 this sequence version replaced gi:266630553.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 6005
topology: linear
so has quality: SO_0000987
location: 1..6005
location: region:1-6005:1
RO_0002162: 484906

NC_009902
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Genome sequence of Babesia bovis and comparative analysis of apicomplexan hemoprotozoa
author: Brayton, K.A.
author: Lau, A.O.
author: Herndon, D.R.
author: Hannick, L.
author: Kappmeyer, L.S.
author: Berens, S.J.
author: Bidwell, S.L.
author: Brown, W.C.
author: Crabtree, J.
author: Fadrosh, D.
author: Feldblum, T.
author: Forberger, H.A.
author: Haas, B.J.
author: Howell, J.M.
author: Khouri, H.
author: Koo, H.
author: Mann, D.J.
author: Norimine, J.
author: Paulsen, I.T.
author: Radune, D.
author: Ren, Q.
author: Smith, R.K. Jr.
author: Suarez, C.E.
author: White, O.
author: Wortman, J.R.
author: Knowles, D.P. Jr.
author: McElwain, T.F.
author: Nene, V.M.
journal: PLoS Pathog.
volume: 3
issue: 10
pages: 1401-1413
year: 2007
pubmed: 17953480

17953480
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (09-OCT-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Nene, V.
journal: Submitted (02-AUG-2007) The J. Craig Venter Institute, 9712 Medical Center Dr, Rockville, MD 20850, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6005:1
position: 6005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6005:1:source
so part of: sequence
organism: Babesia bovis T2Bo
organelle: mitochondrion
mol type: genomic DNA

484906
type: Taxonomy
SIO_000068: taxonomy

OMW61_mgp1
type: Gene
subclass of: SO_0000704
RO_0002162: 484906
locus tag: OMW61_mgp1
so part of: sequence
location: 161..1594
location: region:161-1594:1
so has part: feature:161-1594:1:exon
subclass of: SO_0000010

5666290
type: Gene
SIO_000068: ncbigene

position:161:1
position: 161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1594:1
position: 1594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161-1594:1:exon

OMW61_mgp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 484906
locus tag: OMW61_mgp1
codon start: 1
transl table: 4
product: cytochrome c oxidase subunit I
translation: MFAFAGYSSVSANHKVIGISYIWLSYWFGVIGFYMSILIRTELSMSGLKIMTMDTLEIYNMMFSLHGLIMIFFNVMTGLFGGIGNYLYPIILGAADVVFPRANLYSLFLQPVAFGLVIASVYLEMGSGTGWTLYPPLSTSISSLGVDFIIFGLLASGIASAMSGANFVVTFGALKSIGQTIDRLSVLAWSIVLTAFLLLVSLPVVTSVLLMVFLDRHYNTMFFESSNSGDPILYQHLFWFFGHPEVYILILPGFGIISLIVCTYCGKELFGNLTMILAMISIALLGCLVWAHHMYTSGLEADTRAFFTTTTILIALPTGNKIFNWVCTLQEAVEVRNLGTVLMSIMFVITFVIGGVTGVILGNAGVDISLHDTLYVVGHFHFVLSIGAIISLLSFIFYCQRLLVGTIFSNQLILIIIPAFMAGIFLTFMPMHFLGFTPLPRRIPDYPDDMWGWNFLCTIGSTMIFFLKLITVIFISL
SIO_010081: OMW61_mgp1
subclass of: SO_0000673
so part of: OMW61_mgp1
location: 161..1594
location: region:161-1594:1
so has part: feature:161-1594:1:exon

YP_001504106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161-1594:1:exon

OMW61_mgp2
type: Gene
subclass of: SO_0000704
RO_0002162: 484906
locus tag: OMW61_mgp2
so part of: sequence
location: complement(2404..3090)
location: region:2404-3090:-1
so has part: feature:2404-3090:-1:exon
subclass of: SO_0000010

5666285
type: Gene
SIO_000068: ncbigene

position:2404:-1
position: 2404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3090:-1
position: 3090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2404-3090:-1:exon

OMW61_mgp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 484906
locus tag: OMW61_mgp2
codon start: 1
transl table: 4
product: cytochrome c oxidase subunit III
translation: MRYPGIFDSIHKNCFFIIYLKNHSLFATSLQSVSLGEVFLLSFVSSVNTSREFSTTESSTLYSVFGMLIFSEILLFFGFIWDYLHARLGNIYIDMPLNLEPYLNITSSLNITSSVISILVYKMTVSHFSDFEKWLTSAFFIGSLFLSYQGDEYTFLQCGLNDSWFSLAFLIITGLHSLHVCVGVLFICLSVNYHDSDGSNRVEDFNIGTYWHFVELIWVALTMLLFLM
SIO_010081: OMW61_mgp2
subclass of: SO_0000673
so part of: OMW61_mgp2
location: complement(2404..3090)
location: region:2404-3090:-1
so has part: feature:2404-3090:-1:exon

YP_001504107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2404-3090:-1:exon

OMW61_mgr1
type: Gene
subclass of: SO_0000704
RO_0002162: 484906
locus tag: OMW61_mgr1
so part of: sequence
location: 3198..3499
location: region:3198-3499:1
so has part: feature:3198-3499:1:exon
subclass of: SO_0000573

5666288
type: Gene
SIO_000068: ncbigene

position:3198:1
position: 3198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3499:1
position: 3499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3198-3499:1:exon

OMW61_mgr1
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 484906
locus tag: OMW61_mgr1
product: large subunit ribosomal RNA
note: rRNA 1; fragment
SIO_010081: OMW61_mgr1
subclass of: SO_0000673
so part of: OMW61_mgr1
location: 3198..3499
location: region:3198-3499:1
so has part: feature:3198-3499:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3198-3499:1:exon

OMW61_mgr2
type: Gene
subclass of: SO_0000704
RO_0002162: 484906
locus tag: OMW61_mgr2
so part of: sequence
location: complement(3510..3620)
location: region:3510-3620:-1
so has part: feature:3510-3620:-1:exon
subclass of: SO_0000573

5666289
type: Gene
SIO_000068: ncbigene

position:3510:-1
position: 3510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3620:-1
position: 3620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3510-3620:-1:exon

OMW61_mgr2
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 484906
locus tag: OMW61_mgr2
product: large subunit ribosomal RNA
note: rRNA 2; fragment
SIO_010081: OMW61_mgr2
subclass of: SO_0000673
so part of: OMW61_mgr2
location: complement(3510..3620)
location: region:3510-3620:-1
so has part: feature:3510-3620:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3510-3620:-1:exon

OMW61_mgr3
type: Gene
subclass of: SO_0000704
RO_0002162: 484906
locus tag: OMW61_mgr3
so part of: sequence
location: complement(4460..4494)
location: region:4460-4494:-1
so has part: feature:4460-4494:-1:exon
subclass of: SO_0000573

5666284
type: Gene
SIO_000068: ncbigene

position:4460:-1
position: 4460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4494:-1
position: 4494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4460-4494:-1:exon

OMW61_mgr3
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 484906
locus tag: OMW61_mgr3
product: large subunit ribosomal RNA
note: rRNA 3; fragment
SIO_010081: OMW61_mgr3
subclass of: SO_0000673
so part of: OMW61_mgr3
location: complement(4460..4494)
location: region:4460-4494:-1
so has part: feature:4460-4494:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4460-4494:-1:exon

OMW61_mgp3
type: Gene
subclass of: SO_0000704
RO_0002162: 484906
locus tag: OMW61_mgp3
so part of: sequence
location: complement(4497..5588)
location: region:4497-5588:-1
so has part: feature:4497-5588:-1:exon
subclass of: SO_0000010

5666287
type: Gene
SIO_000068: ncbigene

position:4497:-1
position: 4497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5588:-1
position: 5588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4497-5588:-1:exon

OMW61_mgp3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 484906
locus tag: OMW61_mgp3
codon start: 1
transl table: 4
product: cytochrome b
translation: MNLLNSHLLSYLVPRNLNSNWNLGFIVGFVFVFQILSGLLLTFYYVPGSVDSFECVIRVLAEVNMGWAMRYFHAQCVSFCFFFMMLHMLKGLWYSSRYLPWSWYSGMVIFILSMAIAFLGYVLPYGQMSYWGATVIINLFYWFPDLVALVLGGYGVAFPTLQRFYILHFILPFVLLIVVLIHIYYLHRSSSTNPLSGVDSWLVSRFYPVIIFSDIRMLTMLFILLGVQLTYGVIPLFQGDCDNSIMANPLQTPMHIVPEWYLLTFYATLKMFPSKMAGLIAMGILLESIILIVESRAICSVVSCVTYHRSWTSITLPMIPALFILGSLGRLALNNGLMFIGICSVLIVLYACMRLLDCVRIRM
SIO_010081: OMW61_mgp3
subclass of: SO_0000673
so part of: OMW61_mgp3
location: complement(4497..5588)
location: region:4497-5588:-1
so has part: feature:4497-5588:-1:exon

YP_001504108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4497-5588:-1:exon

OMW61_mgr4
type: Gene
subclass of: SO_0000704
RO_0002162: 484906
locus tag: OMW61_mgr4
so part of: sequence
location: complement(5626..5693)
location: region:5626-5693:-1
so has part: feature:5626-5693:-1:exon
subclass of: SO_0000573

5666286
type: Gene
SIO_000068: ncbigene

position:5626:-1
position: 5626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5693:-1
position: 5693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5626-5693:-1:exon

OMW61_mgr4
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 484906
locus tag: OMW61_mgr4
product: large subunit ribosomal RNA
note: rRNA 4; fragment
SIO_010081: OMW61_mgr4
subclass of: SO_0000673
so part of: OMW61_mgr4
location: complement(5626..5693)
location: region:5626-5693:-1
so has part: feature:5626-5693:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5626-5693:-1:exon

OMW61_mgr5
type: Gene
subclass of: SO_0000704
RO_0002162: 484906
locus tag: OMW61_mgr5
so part of: sequence
location: 5766..5847
location: region:5766-5847:1
so has part: feature:5766-5847:1:exon
subclass of: SO_0000573

5666291
type: Gene
SIO_000068: ncbigene

position:5766:1
position: 5766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5847:1
position: 5847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5766-5847:1:exon

OMW61_mgr5
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 484906
locus tag: OMW61_mgr5
product: large subunit ribosomal RNA
note: rRNA 5; fragment
SIO_010081: OMW61_mgr5
subclass of: SO_0000673
so part of: OMW61_mgr5
location: 5766..5847
location: region:5766-5847:1
so has part: feature:5766-5847:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5766-5847:1:exon