Mugil cephalus isolate CIBA_MC_2020 chromosome 24, CIBA_Mcephalus_1.1, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Mugilomorphae; Mugilidae; Mugil.
REFSEQ INFORMATION: The reference sequence is identical to\nCM039578.1.\nAssembly name: CIBA_Mcephalus_1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the ICAR - Central Institute of\nBrackishwater Aquaculture on 2022/03/04. The original whole-genome\nshotgun project has the accession JAJAQD000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: ICAR - Central Institute of Brackishwater\n Aquaculture\nAssembly Date :: 2021\nAssembly Method :: WTDBG v. 2.5\nAssembly Name :: CIBA_Mcephalus_1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 406.0x\nSequencing Technology :: PacBio Sequel; Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Mugil cephalus Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC125003406, transcript variant X2
uncharacterized LOC125003406, transcript variant X1
uncharacterized LOC125003407, transcript variant X2
uncharacterized LOC125003407, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns