Hydrogenophaga pseudoflava strain DSM 1084 plasmid pDSM1084, complete sequence.
type: Entry
definition: Hydrogenophaga pseudoflava strain DSM 1084 plasmid pDSM1084, complete sequence.
sequence version: NZ_CP037868.1
sequence date: 2023-04-19
sequence: sequence
division: CON
label: NZ_CP037868.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN11056680
keyword: RefSeq
source: Hydrogenophaga pseudoflava
organism: Hydrogenophaga pseudoflava
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP037868.1.\nAnnotated using prokka v1.11 from from\nhttp://www.vicbioinformatics.com.\nBacteria and source DNA available from DSM 1084.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Newbler v. 2.8; canu v. 1.6\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 125.3x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/19/2023 02:06:04\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,738\nCDSs (total) :: 4,681\nGenes (coding) :: 4,633\nCDSs (with protein) :: 4,633\nGenes (RNA) :: 57\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 48\nncRNAs :: 3\nPseudo Genes (total) :: 48\nCDSs (without protein) :: 48\nPseudo Genes (ambiguous residues) :: 0 of 48\nPseudo Genes (frameshifted) :: 11 of 48\nPseudo Genes (incomplete) :: 40 of 48\nPseudo Genes (internal stop) :: 2 of 48\nPseudo Genes (multiple problems) :: 5 of 48\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 45188
topology: circular
so has quality: SO_0000988
location: 1..45188
location: region:1-45188:1
RO_0002162: 47421

NZ_CP037868
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN11056680
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Sebastian, G.
author: Baumann, P.
author: Ruckert, C.
author: Kalinowski, J.
author: Nebel, B.
author: Takors, R.
author: Blombach, B.
journal: Submitted (06-MAR-2019) CeBiTec, Bielefeld University, Sequenz 1, Bielefeld 33615, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45188:1
position: 45188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-45188:1:source
so part of: sequence
organism: Hydrogenophaga pseudoflava
mol type: genomic DNA
strain: DSM 1084
isolation source: mud
culture collection: DSM:1084
plasmid: pDSM1084
country: Russia: Moscwa river
collection date: 1977

47421
type: Taxonomy
SIO_000068: taxonomy

HPF_RS23325
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23325
old locus tag: HPF_23200
so part of: sequence
location: join(45042..45188,1..897)
location: region:1-45188:1
so has part: feature:45042-45188:1:exon
so has part: feature:1-897:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:45042-45188:1:exon

position:45042:1
position: 45042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-897:1:exon

position:897:1
position: 897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HPF_RS23325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23325
old locus tag: HPF_23200
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: replication protein RepA
translation: MADSEAKTGAVPARVDYGRDAVPDWIREVIETGLAIEREDARSTGSLGFMTRALVSASMPYKDPKTKFFERQNGDLTLTMLSPKGVPYGKYPRLLLSWLITEAVTTRSPVVTLGDTLAEFLRATIGVEATGGKRGTATRVSEQMERLFKSLISVDRRDQPDARSFSFENITLVRGGTIDQEDMRRLDSLDAIENTGDVAGQHLWRAADRTSEQGRWNSQVELTPQFFRECIETPVPLDLRAYRALSPSPMAMDIYSWCTYRMSYIKRPTRPIPWPILQAQFGSGFPFTEQGTRDFKKAFKRNLDIVRLTYPDLRVDETSDRGGLILMPSKPHIPKLSRGSAEQKRLF
SIO_010081: HPF_RS23325
subclass of: SO_0000673
so part of: HPF_RS23325
location: join(45042..45188,1..897)
location: region:1-45188:1
so has part: feature:45042-45188:1:exon
so has part: feature:1-897:1:exon

WP_133158264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45042-45188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-897:1:exon

HPF_RS23330
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23330
old locus tag: HPF_23205
so part of: sequence
location: 945..1571
location: region:945-1571:1
so has part: feature:945-1571:1:exon
subclass of: SO_0000010

position:945:1
position: 945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1571:1
position: 1571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945-1571:1:exon

HPF_RS23330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23330
old locus tag: HPF_23205
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLPSALARDLDLDIFPSAEPERVAPAQPVKPREGVSRPAVPVRPEADVNRQAQQPAAPGGSKSVPARSAEDRLKKAREAEALFTLETTDLPALKQRDPTIECYGELCVTKRASLVGFRGMNVCLSDVSIEVKSGRIVGALCDIALTTARDMNAVLSDLLGSPTYTKRAISAHATWVADKRKIEIVYWKGTNIHGVPYEKWSVDLGER
SIO_010081: HPF_RS23330
subclass of: SO_0000673
so part of: HPF_RS23330
location: 945..1571
location: region:945-1571:1
so has part: feature:945-1571:1:exon

WP_133158223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:945-1571:1:exon

HPF_RS23335
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23335
old locus tag: HPF_23210
so part of: sequence
location: complement(1611..2342)
location: region:1611-2342:-1
so has part: feature:1611-2342:-1:exon
subclass of: SO_0000010

position:1611:-1
position: 1611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2342:-1
position: 2342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1611-2342:-1:exon

HPF_RS23335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23335
old locus tag: HPF_23210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017162823.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NYN domain-containing protein
translation: MTTSENALGRTGVYVDGYNLYYGRLRGTDFKWLDLVKLVEDILSQRDQNERLEGVHLFTAHALAKFAGHGKDSVEAQSAYHRALQAKHGERLTVTYGKHAFDRDGSLLPEFVAGQPYDRTKRTRVWRLEEKKTDVNLAICMYRHAVQKRYDRIILISNDSDAEPALEAIREDFPHIVVGVIVPIRPPALGGETNRRVSGSLALHADWVVKHLTDAQLQAAQLPAQVPTNKKPIRKPTHWGPAP
SIO_010081: HPF_RS23335
subclass of: SO_0000673
so part of: HPF_RS23335
location: complement(1611..2342)
location: region:1611-2342:-1
so has part: feature:1611-2342:-1:exon

WP_243721810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1611-2342:-1:exon

HPF_RS23340
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23340
so part of: sequence
location: 2599..2928
location: region:2599-2928:1
so has part: feature:2599-2928:1:exon
subclass of: SO_0000010

position:2599:1
position: 2599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2928:1
position: 2928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2599-2928:1:exon

HPF_RS23340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23340
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIYEVVFLRKKGLRLRRSELAEPTRGELQLIDWVTVNALGRPIRALLLQQPHGVGQVRRTRATLADPELLSWEAGRQSFRGIEIEVVDGRTYEYEQVWRVTQAPVPGAS
SIO_010081: HPF_RS23340
subclass of: SO_0000673
so part of: HPF_RS23340
location: 2599..2928
location: region:2599-2928:1
so has part: feature:2599-2928:1:exon

WP_133158224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2599-2928:1:exon

HPF_RS23345
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23345
old locus tag: HPF_23215
so part of: sequence
location: 3976..4809
location: region:3976-4809:1
so has part: feature:3976-4809:1:exon
subclass of: SO_0000010

position:3976:1
position: 3976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4809:1
position: 4809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3976-4809:1:exon

HPF_RS23345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23345
old locus tag: HPF_23215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008786715.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF932 domain-containing protein
translation: MTPRLASRFSRQRVGFRSHQPLSDDQIRQYAPSIFAEEKHGSRSTRYTCIPTIDVVQALRREGFEPFEVAQTKVRDEGKREHAKHMLRLRHADQVNAAEANEIILLNSHDGTSSYQMLAGVFRFACANGMVCGDVVEDLRIPHRGDVVGEVVNGAFRVLDQFGQVVESREEMKSLQLNQEEQAIFARAALSLKYDTETAAAPVTEDQVLSTRRLDDRGGDLWRTFNRVQENLIRGGLDARTTTGKRTRTRPVQGIDTNVKLNRALWTLAEEMRRLKG
SIO_010081: HPF_RS23345
subclass of: SO_0000673
so part of: HPF_RS23345
location: 3976..4809
location: region:3976-4809:1
so has part: feature:3976-4809:1:exon

WP_133158225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3976-4809:1:exon

HPF_RS23350
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23350
old locus tag: HPF_23220
so part of: sequence
location: 4881..5177
location: region:4881-5177:1
so has part: feature:4881-5177:1:exon
subclass of: SO_0000010

position:4881:1
position: 4881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5177:1
position: 5177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4881-5177:1:exon

HPF_RS23350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23350
old locus tag: HPF_23220
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLKAVVFFLGVVLVAVAGGSASASVLGGVGLLLMGAAGFPVVVAPSPVQVRPVAPIAYQVGRRADSLTVYELEHGGGVVVFRFVDGRLTSRFFRAVG
SIO_010081: HPF_RS23350
subclass of: SO_0000673
so part of: HPF_RS23350
location: 4881..5177
location: region:4881-5177:1
so has part: feature:4881-5177:1:exon

WP_133158226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4881-5177:1:exon

HPF_RS23355
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23355
old locus tag: HPF_23225
so part of: sequence
location: 5186..5515
location: region:5186-5515:1
so has part: feature:5186-5515:1:exon
subclass of: SO_0000010

position:5186:1
position: 5186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5515:1
position: 5515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5186-5515:1:exon

HPF_RS23355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23355
old locus tag: HPF_23225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010099839.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin
translation: MGSLIALRVYDFGQNDGIQNKGGSMGAVDLGINGGAIQYEVALEILGQERQPFMAALRAERAKAEPSSALVRYYEARLAALDELQDSLRTSDTAAVVQILDPKNKLFRS
SIO_010081: HPF_RS23355
subclass of: SO_0000673
so part of: HPF_RS23355
location: 5186..5515
location: region:5186-5515:1
so has part: feature:5186-5515:1:exon

WP_243721811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5186-5515:1:exon

HPF_RS23360
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23360
old locus tag: HPF_23230
so part of: sequence
location: 5518..6696
location: region:5518-6696:1
so has part: feature:5518-6696:1:exon
subclass of: SO_0000010

position:5518:1
position: 5518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6696:1
position: 6696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5518-6696:1:exon

HPF_RS23360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23360
old locus tag: HPF_23230
inference: COORDINATES: protein motif:HMM:NF018154.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zeta toxin family protein
translation: MEAQSYQPLTPAEIKETARAYYRERAGKTRAPETPTYALVGGQPGAGKSFAGQMVRDELASVGGYIHVDADRMRERIDTKGTKPSSQETQADAGRLVGELRSYAVADRRNVIEEGTFRDSLAALAFVQARKDDGYRVELVAVATPAAESTLGIYQRHEQQHLSGSHNPRFVPQDYHDKAMQGFERSVALVAPLVDRSRVITRDGAVLYDSASRDNKHPSAVAALRAGQQLTPERLTPVQNGWEIVRELAQARGADHAYMAAVYDNIGTTHRLGVALAQAGESVKVPTPAEVLRGAHGLAHPSKTGTAELDAALKLAGEKGLLAKKFGQAVQAGESPKAPSPAEALRGTHGLAHPSKEPSAEAQARAVLQLVRERGIVPAPTTTPPKDRDRDR
SIO_010081: HPF_RS23360
subclass of: SO_0000673
so part of: HPF_RS23360
location: 5518..6696
location: region:5518-6696:1
so has part: feature:5518-6696:1:exon

WP_165961771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5518-6696:1:exon

HPF_RS23365
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23365
old locus tag: HPF_23235
so part of: sequence
location: 6777..7109
location: region:6777-7109:1
so has part: feature:6777-7109:1:exon
subclass of: SO_0000010

position:6777:1
position: 6777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7109:1
position: 7109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6777-7109:1:exon

HPF_RS23365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23365
old locus tag: HPF_23235
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRRLVAGFVLAVPFFLSACGGGGGGEETPTVDLYSAYTSVSQGMTYQQVRDVVGVDYNAGKQDYGAEVTYAWQVGKGTNKPEILTVQFRNGAAFGKIYETPGKEEFKYW
SIO_010081: HPF_RS23365
subclass of: SO_0000673
so part of: HPF_RS23365
location: 6777..7109
location: region:6777-7109:1
so has part: feature:6777-7109:1:exon

WP_133158228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6777-7109:1:exon

HPF_RS23375
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23375
so part of: sequence
location: complement(7614..7970)
location: region:7614-7970:-1
so has part: feature:7614-7970:-1:exon
subclass of: SO_0000010

position:7614:-1
position: 7614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7970:-1
position: 7970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7614-7970:-1:exon

HPF_RS23375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003465043.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MEMESRIFSVTEYIRPSDGEPIRSVVLETKDSAVVVWHAHPGQEITAHVHPDGQDTWTVISGEAEYYQGGGKVAHLKAGDIAIAKPGQVHGALNTSPVPFVFVSVVASGNAGFALAEK
SIO_010081: HPF_RS23375
subclass of: SO_0000673
so part of: HPF_RS23375
location: complement(7614..7970)
location: region:7614-7970:-1
so has part: feature:7614-7970:-1:exon

WP_012435589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7614-7970:-1:exon

HPF_RS23380
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23380
so part of: sequence
location: complement(8104..8664)
location: region:8104-8664:-1
so has part: feature:8104-8664:-1:exon
subclass of: SO_0000010

position:8104:-1
position: 8104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8664:-1
position: 8664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8104-8664:-1:exon

HPF_RS23380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011514928.1
GO function: GO:0020037 - heme binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chlorite dismutase family protein
translation: MDTRLFAFVGADIGPWRIVRAETRVGEPLPEAKRLNVVSASELQSETNAPWILRGITSNERYVMRAEKNEIVAKQQGLARPEATCGALIPIRKNAAWWELTQDERRSVFEQSKHVQIGLQYLPAVARKLHHCRDLSENEPFDFLNWFEYAPIHEVEFNRLLSELRASEEWKYVDREVDIRLTQAQV
SIO_010081: HPF_RS23380
subclass of: SO_0000673
so part of: HPF_RS23380
location: complement(8104..8664)
location: region:8104-8664:-1
so has part: feature:8104-8664:-1:exon

WP_011514928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8104-8664:-1:exon

HPF_RS23385
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23385
old locus tag: HPF_23240
so part of: sequence
location: complement(9071..9355)
location: region:9071-9355:-1
so has part: feature:9071-9355:-1:exon
subclass of: SO_0000010

position:9071:-1
position: 9071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9355:-1
position: 9355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9071-9355:-1:exon

HPF_RS23385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23385
old locus tag: HPF_23240
function: post-segregational-killing
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011342942.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family
translation: MRVVWTPEAQQDRADVWDYIAADNPRAAARMDEIFSDAAARLIQHPMLGKPGKIPGTRELIPHESYRLVYQIDGETVWILTLVHTARLWPPVRD
SIO_010081: HPF_RS23385
subclass of: SO_0000673
so part of: HPF_RS23385
location: complement(9071..9355)
location: region:9071-9355:-1
so has part: feature:9071-9355:-1:exon

WP_011342942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9071-9355:-1:exon

HPF_RS23390
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23390
old locus tag: HPF_23245
so part of: sequence
location: complement(9352..9630)
location: region:9352-9630:-1
so has part: feature:9352-9630:-1:exon
subclass of: SO_0000010

position:9352:-1
position: 9352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9630:-1
position: 9630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9352-9630:-1:exon

HPF_RS23390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23390
old locus tag: HPF_23245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011342941.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKQAVFTMKLEPELRAEFMAEAEAAHRPASQVLRELMREFVQRQRESREYDEFLRRKVEAGRASMRAGLGRSNDEVEAEFAARRASVASQA
SIO_010081: HPF_RS23390
subclass of: SO_0000673
so part of: HPF_RS23390
location: complement(9352..9630)
location: region:9352-9630:-1
so has part: feature:9352-9630:-1:exon

WP_011342941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9352-9630:-1:exon

HPF_RS23395
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23395
old locus tag: HPF_23250
so part of: sequence
location: 9869..10462
location: region:9869-10462:1
so has part: feature:9869-10462:1:exon
subclass of: SO_0000010

position:9869:1
position: 9869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10462:1
position: 10462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9869-10462:1:exon

HPF_RS23395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23395
old locus tag: HPF_23250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012435588.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLVGYMRVSSDSDRQSTNLQRDALLAVGVDARHLFEDHASGAKDDRAGLARALEFVRPGDVLVVWKLDRLGRSLSHLLAIVTSLKKKQVAFRSLTENLDTTTPSGEFLFQVFGALAQYERALIQERVVAGLAAARKRGRIGGRPQAITGEKLEAIVAALDGGMSKAAVCRNFGVKRTTLIETLARVGWTGSRGASSR
SIO_010081: HPF_RS23395
subclass of: SO_0000673
so part of: HPF_RS23395
location: 9869..10462
location: region:9869-10462:1
so has part: feature:9869-10462:1:exon

WP_012435588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9869-10462:1:exon

HPF_RS23400
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23400
old locus tag: HPF_23255
so part of: sequence
location: 10459..13488
location: region:10459-13488:1
so has part: feature:10459-13488:1:exon
subclass of: SO_0000010

position:10459:1
position: 10459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13488:1
position: 13488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10459-13488:1:exon

HPF_RS23400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23400
old locus tag: HPF_23255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015060658.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MTTKSERLTVLSDAEQEALYGLPDFDDAQRLEYLALTETELALASSRPGLHAQVYCILQIGYFKAKHAFFRFDWSEVEHDCAFVLSRYFHGESFEHKPISKHEHYTQREWIADLFGYRPWAAEFLAQLAQQAAQTVRRDVMPGFIAAELIVWLNEHKIIRPGYTTLQELVSEALSAERRRLAGLLSEVLDESAKAALGRLLVRDDTLSQLAALKQDAKDFGWRQMAREREKRATLEPLHRIAKALLPKLGVSQQNLLYYASLANFYTVHDLRNLKADQTYLYLLCYAWVRYRQLSDNLVDAMAYHMKQLEDESSAGAKQSFVAEQVRRQQDTPQVGRLLSLYIDDSVPDPTPFGDVRQRAYKIMPRDTLQTTAQRMSVKPVSKLALHWQAVDGLAERIRRHLRPLYVALDLAGTDPGSPWLVALAWAKDVFAKQQRLSQRPLAECPAATLPKRLRPYLLTFDADGKPTDLHADRYEFWLYRQVRKRFQSGELYLDDSLQHRHFSDELVSLDEKAAVLAQIDIPFLRQPLDAQLDALATELRAQWLAFNRELKQGKLTHLEYDKDTQKLTWRKPKGENQKAREKAFYEQLPFCDVADVFRFVNGQCQFLSALTPLQPRYAKKVADADSLMAVIIAQAMNHGNQVMARTSDIPYHVLESAYQQYLRHATLHAANDCISNAIAALPIFPYYSFDLDALYGAVDGQKFGVERPTVKARHSRKYFGRGKGVVAYTLLCNHVPLNGYLIGAHDYEAHHVFDIWYRNTSDIVPTAITGDMHSVNKANFAILHWFGLRFEPRFTDLGDQLKELYSADDPALYDQCLIRPAGRIDRDLIVSEKPNLDQIVATLGLKEMTQGTLIRKLCTYTAPNPTRRAVFEFDKLIRSIYTLRYLRDPQLERNVHRSQNRIESYHQLRSTIAQVGGKKELTGRTDIEIEISNQCARLIANAVIFYNSAILSRLLMKYEASGNAKAHALLTQISPAAWRHILLNGHYTFQSDGKMIDLDALVAGLELG
SIO_010081: HPF_RS23400
subclass of: SO_0000673
so part of: HPF_RS23400
location: 10459..13488
location: region:10459-13488:1
so has part: feature:10459-13488:1:exon

WP_012077404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10459-13488:1:exon

HPF_RS23405
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23405
old locus tag: HPF_23260
so part of: sequence
location: 13808..14317
location: region:13808-14317:1
so has part: feature:13808-14317:1:exon
subclass of: SO_0000010

position:13808:1
position: 13808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14317:1
position: 14317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13808-14317:1:exon

HPF_RS23405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23405
old locus tag: HPF_23260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011797823.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: JAB domain-containing protein
translation: MSLFSQDLPAPALYVQDSEGVYRPATGDELLKAAQEHLARQIVGRAMFDSPMAVRDYLRCRHATRGYEVFGVLLLDSQNRLIEAVDMFRGTLSQTSVYPREVVRLAMNANAAALIAYHNHPSGASTPSRADESLTSTLKAALAMMDVRLLDHFIITAEKVTSMAELGLV
SIO_010081: HPF_RS23405
subclass of: SO_0000673
so part of: HPF_RS23405
location: 13808..14317
location: region:13808-14317:1
so has part: feature:13808-14317:1:exon

WP_133158230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13808-14317:1:exon

HPF_RS23410
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23410
old locus tag: HPF_23265
so part of: sequence
location: complement(14260..14508)
location: region:14260-14508:-1
so has part: feature:14260-14508:-1:exon
subclass of: SO_0000010

position:14260:-1
position: 14260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14508:-1
position: 14508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14260-14508:-1:exon

HPF_RS23410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23410
old locus tag: HPF_23265
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTWIHEHGHLVARNDAGGVLVKLPADRAFSPLADLLNACPDLSRLLLAGYGCGEQKKGPKPQGHTRPSSAMEVTFSAVMMK
SIO_010081: HPF_RS23410
subclass of: SO_0000673
so part of: HPF_RS23410
location: complement(14260..14508)
location: region:14260-14508:-1
so has part: feature:14260-14508:-1:exon

WP_133158231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14260-14508:-1:exon

HPF_RS23415
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23415
old locus tag: HPF_23270
so part of: sequence
location: 15006..16949
location: region:15006-16949:1
so has part: feature:15006-16949:1:exon
subclass of: SO_0000010

position:15006:1
position: 15006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16949:1
position: 16949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15006-16949:1:exon

HPF_RS23415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23415
old locus tag: HPF_23270
inference: COORDINATES: protein motif:HMM:NF014273.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MAKKPELKQAQQDVMNEAIAGRDDLVPLSVLWLSASNVRSKHDPEGIRSLAGLIEAEGGLLNPLAVVVEVVNGVEGYGVVAGGRRLRALQLLVEQGKMDADALIPVRVFESEQAVSVSLTENVTQEPMNPADELVAFRTLSQEGKSIEQIAARYGVKEMTVRRRLALANLAPEFVDMYREGKVSVDVLQALAQTEDHDRQRQAWAALPSHSRSAYYVRNLLSEDDMSANASMVRFVGLKAYKKAGGATREDLFAEKGQGVYITDKVLLRQLFDERVAAAAKALTDAGWKWAEYREGFSIHTMPRDLIRLQPEVQEPTPEQAKALQAIETRRTQIEARLKELEGPAEHDEAAAEEVDGLCDEQGDLDAKESEIDHARLGWSDEQKAVAGVVLVLDHNAKLFEYCGVMRKEDRPSDPEAGKAVGVQGPAAGERAEFSKSLMSSLTAHRTAAVAASLARNPKAALVALVHALCMSDSSPWLSSPLRFRMTDAGHDVRREAAGYEQCKAAAALLAAEAEVLPDMTGEPAEVFARLLTLDESQLVKILALFVGRSYNVISQEGKKANAHGFDAAAAIEQAVAVDMADWWEPTEETYLGAVSKAAMMKAVTEAGSDAADIASMKKADAITVAQQRLAGRRWLPAPLKAYTAEA
SIO_010081: HPF_RS23415
subclass of: SO_0000673
so part of: HPF_RS23415
location: 15006..16949
location: region:15006-16949:1
so has part: feature:15006-16949:1:exon

WP_133158232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15006-16949:1:exon

HPF_RS23735
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23735
old locus tag: HPF_23275
so part of: sequence
location: complement(17081..17455)
location: region:17081-17455:-1
so has part: feature:17081-17455:-1:exon
subclass of: SO_0000010

position:17081:-1
position: 17081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17455:-1
position: 17455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17081-17455:-1:exon

HPF_RS23735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23735
old locus tag: HPF_23275
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWKVYVQDAATGSIAEHSSGTDVASCKTLVAAGVAGKALILWDGAVPSNPADQDKLFQEVFSANGDEVSQITLGLTMQEPQKNAALSSCSGRCFCVVTRGSRRCETYYCFASGLCYWVPCGSGC
SIO_010081: HPF_RS23735
subclass of: SO_0000673
so part of: HPF_RS23735
location: complement(17081..17455)
location: region:17081-17455:-1
so has part: feature:17081-17455:-1:exon

WP_165961772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17081-17455:-1:exon

HPF_RS23420
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23420
old locus tag: HPF_23280
so part of: sequence
location: 18109..18987
location: region:18109-18987:1
so has part: feature:18109-18987:1:exon
subclass of: SO_0000010

position:18109:1
position: 18109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18987:1
position: 18987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18109-18987:1:exon

HPF_RS23420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23420
old locus tag: HPF_23280
inference: COORDINATES: protein motif:HMM:NF014442.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-6 DNA methylase
translation: MTATHNTNTPKGSESSNAMGWKKKALQIVHSHERTMGKLLQDNARRHRLHKVFSDFCELAALAVSNSVDLVHREAREARYMQIVGEYERDEVQRFPQLLAVLVDWLECGLDDCLGRLFMSLELGDSFKGQFFTPFELSRLMAGLTFGGAREAIERQGFVTVSEPACGAGGMVLAAADALQSQGINYQQAMHATAVDVDATAVHMAYVQLSLAHVPAIIVHGNSLSMKEWGHWFTPAHILGGWDHRLRAHRRHDAPPALVPGMPEVVPPVQDLAEVRAVALAQRAERLQLDLF
SIO_010081: HPF_RS23420
subclass of: SO_0000673
so part of: HPF_RS23420
location: 18109..18987
location: region:18109-18987:1
so has part: feature:18109-18987:1:exon

WP_243721812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18109-18987:1:exon

HPF_RS23425
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23425
old locus tag: HPF_23285
so part of: sequence
location: complement(18990..20078)
location: region:18990-20078:-1
so has part: feature:18990-20078:-1:exon
subclass of: SO_0000010

position:18990:-1
position: 18990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20078:-1
position: 20078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18990-20078:-1:exon

HPF_RS23425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23425
old locus tag: HPF_23285
inference: COORDINATES: protein motif:HMM:NF037617.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009036 - type II site-specific deoxyribonuclease activity [Evidence IEA]
GO process: GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BsuBI/PstI family type II restriction endonuclease
translation: MTLPKLLSVGDIHSRLERLFTPGLEMRKNLVREMAAKTVFVFLYGGMVDGAGRCLRPSHVYFFTEDQAQKTNDEDRLLWLAQSKKPGFRPEGLRWYADTTREPIRDETIRFGLLHVGAVGKLPGVAVTSSLPIYFLKADFAAIFNPDLDEAALEAAITAWQKKHLTAAARARMALLAAGKMKSDDEVLVNCPDGTVAKLSPGPSSIISKAVVEQFAASFLTAPALLWLSESGAKVRYQDEKTAKALGLDIDQSKVLPDIILANVGDTGEDTHLVFVEVVASDGPMNQARRDALLHYIMQSGFPEEQCLFGTAFEDRANGAFKKCLPELAWGTFVWFRSEPDCLMWLYDEPFPITNGLTAPPQ
SIO_010081: HPF_RS23425
subclass of: SO_0000673
so part of: HPF_RS23425
location: complement(18990..20078)
location: region:18990-20078:-1
so has part: feature:18990-20078:-1:exon

WP_133158233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18990-20078:-1:exon

HPF_RS23430
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23430
old locus tag: HPF_23290
so part of: sequence
location: complement(20075..21661)
location: region:20075-21661:-1
so has part: feature:20075-21661:-1:exon
subclass of: SO_0000010

position:20075:-1
position: 20075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21661:-1
position: 21661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20075-21661:-1:exon

HPF_RS23430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23430
old locus tag: HPF_23290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014003234.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Eco57I restriction-modification methylase domain-containing protein
translation: MTAQFHEGDTMCTATEEHERAGKPIGQISLVDFAHEAGRSFTSNISRDEQKAAGQFMTPPKIARFMAQRLVRPVDHQHIRLLEPSAGGGILLAAAVESLLEKPIRPAIIEALLYEQDQRLIPALEALCQRIIEACAAAGVRFEYVIRGEDFLLSELALRGEPVDGLLTIANPPFFKLNKTTDERAHRHGYAVYGQPNVYGLFMAATARLTPANGRWCFIVPRSWMNGQYFKAVRHTMLRHLTVDSLHAFESRRDSFEEDAVLQETVIAWATGRAIRENGFNVLFTRSQGMSDLDQALVQAVPAERIVADDEHATVTLPSDGASLFDGWSATLSSYGLKVSTGPVIAFRCQEFIRAHGSYDTVPLLWMQHVGQQSINWPIFKKLEHVRATAANAWTLVTNTPMVIMRRFSPKEDERRVTCAPYLGTLPGAVIGLENHLNYIHRPGGRMSHSEVRGLSALLASSVVDRHLRAIAGSTQINAGELRSLPLPSMNIIEAIGCRVSEFPTLEEIDTAVEAELGLSAAPRKVAA
SIO_010081: HPF_RS23430
subclass of: SO_0000673
so part of: HPF_RS23430
location: complement(20075..21661)
location: region:20075-21661:-1
so has part: feature:20075-21661:-1:exon

WP_243721813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20075-21661:-1:exon

HPF_RS23435
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23435
old locus tag: HPF_23295
so part of: sequence
location: complement(21690..21878)
location: region:21690-21878:-1
so has part: feature:21690-21878:-1:exon
subclass of: SO_0000010

position:21690:-1
position: 21690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21878:-1
position: 21878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21690-21878:-1:exon

HPF_RS23435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23435
old locus tag: HPF_23295
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTQDRENLVKAAQTANLLASDLKALTASADPFLAELSIDLLASAAALEQRLNRLAVLASDS
SIO_010081: HPF_RS23435
subclass of: SO_0000673
so part of: HPF_RS23435
location: complement(21690..21878)
location: region:21690-21878:-1
so has part: feature:21690-21878:-1:exon

WP_133158234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21690-21878:-1:exon

HPF_RS23440
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23440
old locus tag: HPF_23300
so part of: sequence
location: complement(22041..22466)
location: region:22041-22466:-1
so has part: feature:22041-22466:-1:exon
subclass of: SO_0000010

position:22041:-1
position: 22041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22466:-1
position: 22466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22041-22466:-1:exon

HPF_RS23440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23440
old locus tag: HPF_23300
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDDTSESRRQLAGRLFEAGGRPLSPDDPIFDVVFIARSVMREEQARMTQDLETLATSLAETLARESARLQAVANETRQLVETLAKTAERLEAAETARKQNGPAQVAQLLDGINKVFEEKVRAAVSAANAAPRTPPGVPPAA
SIO_010081: HPF_RS23440
subclass of: SO_0000673
so part of: HPF_RS23440
location: complement(22041..22466)
location: region:22041-22466:-1
so has part: feature:22041-22466:-1:exon

WP_133158235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22041-22466:-1:exon

HPF_RS23445
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23445
old locus tag: HPF_23305
so part of: sequence
location: complement(22466..23197)
location: region:22466-23197:-1
so has part: feature:22466-23197:-1:exon
subclass of: SO_0000010

position:23197:-1
position: 23197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22466-23197:-1:exon

HPF_RS23445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23445
old locus tag: HPF_23305
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraL
translation: MNKVHFFLQAKGGIGKSFSASLFSQYLMQKGKTVVGIDTDQNNQTLMQYKGLNVKHVNIMGENRTFNTRQFDGMVESMLDATDTEFVIDNGANTFEPLCNYMIEGAVFQMLRDAGHEVVIHTIIGGGDNFLDTLAGFADLARQFDTPIVVWKNRHFGKTEDKGVELEETKAFKAAKNKILGVITLPALNPSTHGADIQRMCKERMTLQEALASPDFGRMAQSRVKRVFDEVYAQLDELETASV
SIO_010081: HPF_RS23445
subclass of: SO_0000673
so part of: HPF_RS23445
location: complement(22466..23197)
location: region:22466-23197:-1
so has part: feature:22466-23197:-1:exon

WP_133158236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22466-23197:-1:exon

HPF_RS23450
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23450
so part of: sequence
location: complement(23210..23647)
location: region:23210-23647:-1
so has part: feature:23210-23647:-1:exon
subclass of: SO_0000010

position:23210:-1
position: 23210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23647:-1
position: 23647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23210-23647:-1:exon

HPF_RS23450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23450
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTQTTPQTLKEALERAGWPERQFRSTSAALRLALDYLEHQQANGVSRASLHEEFSALGFNCPFNTFVVALKRAKAKNKSETTSPVIKKTTAPSSANTLPQTTQGGSRANKDPEKDGGPAKSPKGEIPGFVSSEKTDPTKLREQLV
SIO_010081: HPF_RS23450
subclass of: SO_0000673
so part of: HPF_RS23450
location: complement(23210..23647)
location: region:23210-23647:-1
so has part: feature:23210-23647:-1:exon

WP_133158237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23210-23647:-1:exon

HPF_RS23455
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23455
so part of: sequence
location: 23900..24463
location: region:23900-24463:1
so has part: feature:23900-24463:1:exon
subclass of: SO_0000010

position:23900:1
position: 23900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24463:1
position: 24463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23900-24463:1:exon

HPF_RS23455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23455
inference: COORDINATES: protein motif:HMM:NF017524.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobC family plasmid mobilization relaxosome protein
translation: MSDSHSSSFKRHQLRFDAGPHGPAFDALCASEGVKPKDMLRRLIAAHLAEKQSAQAKPKSRVAVGEHDGPKRRRELRLTPSEDELLERAALRHGSSVRDYIIAIARAHAADARVGEDERANLGKINYQLLAIGRNINQIAHRANAFDGVTQQQLDDLRGLERGLRELSSQVHKHLIAGRERWRIVND
SIO_010081: HPF_RS23455
subclass of: SO_0000673
so part of: HPF_RS23455
location: 23900..24463
location: region:23900-24463:1
so has part: feature:23900-24463:1:exon

WP_133158238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23900-24463:1:exon

HPF_RS23460
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23460
old locus tag: HPF_23310
so part of: sequence
location: 24456..25562
location: region:24456-25562:1
so has part: feature:24456-25562:1:exon
subclass of: SO_0000010

position:24456:1
position: 24456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25562:1
position: 25562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24456-25562:1:exon

HPF_RS23460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23460
old locus tag: HPF_23310
inference: COORDINATES: protein motif:HMM:NF015397.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MIDVEGILHDWGERWDWSYQGAKGRPIGDAGRLQIRFNSLSSGKRTARAALNAIVRRTPQAVVKITGGGRGMRAMAVHLRYISRDGDVELTDEQGIKARGPDEVAELARSMESGGGDVVPPLSPRREAFNIVLSMPPGTDRFQFEKAANEFIRRQFAGTQYAYAHHDDEAHPHVHLMVKAVRLDGKRLNPRKAEIAQWRANFAATLREHGIDADATPRQVRLSRSAGVSQAAVHGKGSEQEGRAVREGLAAAIRRDQLQAKQGQGAKTRKKVVRDLWAVHAALKSTNRGSDMALARKISAMLRKEGYHDDYKYERAKAVAAGLARGGEADRSGPHRLRDVPTRDVAPGARPNEAGRVLQADAPRDIQR
SIO_010081: HPF_RS23460
subclass of: SO_0000673
so part of: HPF_RS23460
location: 24456..25562
location: region:24456-25562:1
so has part: feature:24456-25562:1:exon

WP_133158239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24456-25562:1:exon

HPF_RS23465
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23465
old locus tag: HPF_23315
so part of: sequence
location: 25715..26053
location: region:25715-26053:1
so has part: feature:25715-26053:1:exon
subclass of: SO_0000010

position:25715:1
position: 25715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26053:1
position: 26053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25715-26053:1:exon

HPF_RS23465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23465
old locus tag: HPF_23315
inference: COORDINATES: protein motif:HMM:NF019069.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbM/KikA/MpfK family conjugal transfer protein
translation: MTRTIKSLFVACAAVTALSAAAQEANEACAALLCMSSPSESSAPHECKPYVDAYFDIRVYKKGTFSTAYDPVRTAAKRYETILEQCGDARQIDRDRVHAKFGHLQYSPFVFN
SIO_010081: HPF_RS23465
subclass of: SO_0000673
so part of: HPF_RS23465
location: 25715..26053
location: region:25715-26053:1
so has part: feature:25715-26053:1:exon

WP_243721809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25715-26053:1:exon

HPF_RS23470
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23470
so part of: sequence
location: 26069..26539
location: region:26069-26539:1
so has part: feature:26069-26539:1:exon
subclass of: SO_0000010

position:26069:1
position: 26069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26539:1
position: 26539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26069-26539:1:exon

HPF_RS23470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23470
inference: COORDINATES: protein motif:HMM:NF013618.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MSISADALTALLLACAPAVHPDTGAAIVRHESGGELWALGVNGGKVKPQPRTAAQAAAAARVWIAAGVTVDLGLAQINSRTAARLGFTVEQVLDPCTNLRAMQQVMVENYRAGAALRGQGQGGLEAALSTYNTGSPTRGLSNGYVGKVLSKAGEKK
SIO_010081: HPF_RS23470
subclass of: SO_0000673
so part of: HPF_RS23470
location: 26069..26539
location: region:26069-26539:1
so has part: feature:26069-26539:1:exon

WP_133158241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26069-26539:1:exon

HPF_RS23475
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23475
old locus tag: HPF_23325
so part of: sequence
location: 26587..26934
location: region:26587-26934:1
so has part: feature:26587-26934:1:exon
subclass of: SO_0000010

position:26587:1
position: 26587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26934:1
position: 26934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26587-26934:1:exon

HPF_RS23475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23475
old locus tag: HPF_23325
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLVIQLPARPGRKTGRQNTRFAAKQTEGSAMKTWTDGTQFAVLCKQGRVGNVRVQVVEGGYALFFCLDKSREEEPLLKARTKTVRVWSKLDTLIHWVVENTNLKTLTISLEKEP
SIO_010081: HPF_RS23475
subclass of: SO_0000673
so part of: HPF_RS23475
location: 26587..26934
location: region:26587-26934:1
so has part: feature:26587-26934:1:exon

WP_133158242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26587-26934:1:exon

HPF_RS23480
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23480
old locus tag: HPF_23330
so part of: sequence
location: 26931..27230
location: region:26931-27230:1
so has part: feature:26931-27230:1:exon
subclass of: SO_0000010

position:26931:1
position: 26931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27230:1
position: 27230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26931-27230:1:exon

HPF_RS23480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23480
old locus tag: HPF_23330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009550164.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MTSHTTIPRSGAFALAALVGLAFLVSPEAAFAQAQVNTVLSRVVTMLTGAGVLILTVAIIWVGYKMIFAGARFSDVAHILIGGILIGGAATFASWLLGS
SIO_010081: HPF_RS23480
subclass of: SO_0000673
so part of: HPF_RS23480
location: 26931..27230
location: region:26931-27230:1
so has part: feature:26931-27230:1:exon

WP_133158243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26931-27230:1:exon

HPF_RS23485
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23485
old locus tag: HPF_23335
so part of: sequence
location: 27230..27550
location: region:27230-27550:1
so has part: feature:27230-27550:1:exon
subclass of: SO_0000010

position:27550:1
position: 27550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27230-27550:1:exon

HPF_RS23485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23485
old locus tag: HPF_23335
inference: COORDINATES: protein motif:HMM:NF016957.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB3 family type IV secretion system protein
translation: MALTKHLFHKGCTKPAMVLGMPLLGFVLLFMVWVLLAMYSMTYATAPLAFLWTVLFLAACAWLRAISKTDGFAFSQKLLRVRLRSRNVNRVFWGAVSYSPLKRQKK
SIO_010081: HPF_RS23485
subclass of: SO_0000673
so part of: HPF_RS23485
location: 27230..27550
location: region:27230-27550:1
so has part: feature:27230-27550:1:exon

WP_133158244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27230-27550:1:exon

HPF_RS23490
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23490
old locus tag: HPF_23340
so part of: sequence
location: 27547..29949
location: region:27547-29949:1
so has part: feature:27547-29949:1:exon
subclass of: SO_0000010

position:27547:1
position: 27547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29949:1
position: 29949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27547-29949:1:exon

HPF_RS23490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23490
old locus tag: HPF_23340
inference: COORDINATES: protein motif:HMM:NF015118.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB4 family type IV secretion/conjugal transfer ATPase
translation: MKTKKQNREEPLNTAKEVSGAEFLNVGGHVQPDVLRLRDGSGYLMTWQLDGIPFEATEDEYLESRSRALVSFIKSIGGGERAVWVHRVRRLTVPDFGHAEYDNAFAAQVDAKYREQLSKSSMMETALFMTLLVRCPSFKIPKWQFWVPRKGLEDIAQKEAHYIAEIHGQALQVEAALKRYGPRRLGIAERGGRQYSELAELFSYLMTGVQRQVPYSQMDVRHQLQAGRVFFGDRNALWEAKGNPATYGRFYDILQYPEAGVTVRTNDAILAGDFEFIETQSYSLMARRDAAYELEKQRKQMIAGDEASTAEIESMAEAIESLRDGRIEMGEYHYSLNVLGRSLEEAEAAAKRAEALMSEQDFLLVPNVECPDAAWLAQIPGSWALRPRLAYIPSPNFACMSALHNYPAGKRDGNPWGRALTVLDSVSRQPYYFNLHRSPQDEDSEDRKLPGNTVVLGATGVGKTTFVLFLVCQLQKYRPHLVVFDKDRGTEIAIRALGGSYTAFKRGEYTGLNPFQWRDTPTTRKLCESLVEVCVGGNLTARERDDIHRAVKVVFEEVDFDQRRLAAVDQALPDVGENGLGLRLARWVNHGALAWVLDSPRDTLQLDSNRLFGFDYTEFLDDNETRTPIMMALLAACEGLIDGTPFAYVMDEFWKPLSDPVFTEFAKDKLKTIRKQNGLGLFSTQSPSDALQSTIGKTIVEQCITHIYLPNPKASYDDYVGGFKCTPAEFELIRNFGEDSRLMLVKQGEGSTVCRLDLGSMQEELVALSGSTDNVLRLDEIRAQVGDDFAAWWPLLTGKK
SIO_010081: HPF_RS23490
subclass of: SO_0000673
so part of: HPF_RS23490
location: 27547..29949
location: region:27547-29949:1
so has part: feature:27547-29949:1:exon

WP_133158245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27547-29949:1:exon

HPF_RS23495
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23495
old locus tag: HPF_23345
so part of: sequence
location: 29951..30940
location: region:29951-30940:1
so has part: feature:29951-30940:1:exon
subclass of: SO_0000010

position:29951:1
position: 29951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30940:1
position: 30940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29951-30940:1:exon

HPF_RS23495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23495
old locus tag: HPF_23345
inference: COORDINATES: protein motif:HMM:NF016491.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MPNAFATIADTITGTLVTSVTALSGNVAGALSGPALLGVTIYILWMGYLTIMGKVDSPVPTLVMKMVKIALVVFFAVGAGAYQSLVVPAIQGMESWLVGALSGVGATSIPDQVWQTTVALDRFLIDLGTLRAPPDVGVGAISVSLPDFEYMFFQLVVNVGHFIMVILAMVPYLIAKVTLGILLALGPLFIILIIWPATVRFFEAWVSAVVTAVLTFAILSAIIGFVLPIADQIMNTITPGSVGLWGIAAVLVPTYLILGWLAFTAGSVAGQLSGGGGTGNPLATLVGSGMHHLLRGSRGSRSANTGGQVSSRSGGTGAAQKGGAQSEAK
SIO_010081: HPF_RS23495
subclass of: SO_0000673
so part of: HPF_RS23495
location: 29951..30940
location: region:29951-30940:1
so has part: feature:29951-30940:1:exon

WP_133158246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29951-30940:1:exon

HPF_RS23500
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23500
old locus tag: HPF_23350
so part of: sequence
location: 30979..31572
location: region:30979-31572:1
so has part: feature:30979-31572:1:exon
subclass of: SO_0000010

position:30979:1
position: 30979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31572:1
position: 31572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30979-31572:1:exon

HPF_RS23500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23500
old locus tag: HPF_23350
inference: COORDINATES: protein motif:HMM:NF019608.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MLTQKKKALAAAMCAIAMLTAQPSQAQIPVTDALQIAQEAYQHVETLGKWVQQYQQLRAQIELYTYQLESLTGRRGLGGIFNALQAEGMVPDDVRQIVLLATDAKAKLEQIDHVVKNGINHTTLRQGQLQQLLRQIDATEDPKAIAELQARMSGEQVAVQNEGNRLAALSEQMRNQERLVTQAVNEWRNNQRLMALQ
SIO_010081: HPF_RS23500
subclass of: SO_0000673
so part of: HPF_RS23500
location: 30979..31572
location: region:30979-31572:1
so has part: feature:30979-31572:1:exon

WP_165961773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30979-31572:1:exon

HPF_RS23505
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23505
old locus tag: HPF_23355
so part of: sequence
location: 31583..31783
location: region:31583-31783:1
so has part: feature:31583-31783:1:exon
subclass of: SO_0000010

position:31583:1
position: 31583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31783:1
position: 31783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31583-31783:1:exon

HPF_RS23505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23505
old locus tag: HPF_23355
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIKRVLVLVLFAPLFGCGQQAADPVVVNKITAPGAPVAIQPCDEECKRVAQHRENQRRKGLDSAF
SIO_010081: HPF_RS23505
subclass of: SO_0000673
so part of: HPF_RS23505
location: 31583..31783
location: region:31583-31783:1
so has part: feature:31583-31783:1:exon

WP_133158248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31583-31783:1:exon

HPF_RS23510
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23510
old locus tag: HPF_23360
so part of: sequence
location: 31803..32483
location: region:31803-32483:1
so has part: feature:31803-32483:1:exon
subclass of: SO_0000010

position:31803:1
position: 31803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32483:1
position: 32483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31803-32483:1:exon

HPF_RS23510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23510
old locus tag: HPF_23360
inference: COORDINATES: protein motif:HMM:NF016238.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MNEKKTVGWGAERDARLRVERNAAWWVAGISALTAMSMSIAIAVMVPLKQTVPYLIEVNKATGEAQVIDAVNRRSIDYDELNAKYWAAKYVTARESYFYTLLQTDYDSVFAMSTPDVSTQYNKMFEGGSNKQQTLGASVEERIEILSITLDKGTPGVNLDRAVVRFKKTTRQVDRGFDSGSGQYVSTLSYRWVPNRTGKEVELLRNPLGFEVVAYRVDEEFTNKAK
SIO_010081: HPF_RS23510
subclass of: SO_0000673
so part of: HPF_RS23510
location: 31803..32483
location: region:31803-32483:1
so has part: feature:31803-32483:1:exon

WP_165961774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31803-32483:1:exon

HPF_RS23515
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23515
old locus tag: HPF_23365
so part of: sequence
location: 32485..33369
location: region:32485-33369:1
so has part: feature:32485-33369:1:exon
subclass of: SO_0000010

position:32485:1
position: 32485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33369:1
position: 33369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32485-33369:1:exon

HPF_RS23515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23515
old locus tag: HPF_23365
inference: COORDINATES: protein motif:HMM:NF015487.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbG/VirB9 family P-type conjugative transfer protein
translation: MKTSGKIAAGILVVALGLSAISVHAKDEPRRSERDNRIGYVTYDGENVVEIPVALGVVTRVILEAGEKIKILGSGFSSQCKSETDLWCIEAEPGSNQIWVKPMPGATSNNVELSTDRRDYSIRFVRDTQRISKYRVHFQYPVAMPIAPPHIDANGVPQYDVFTPERIRQRAEAVEQVMAGRMGNAKYSMEAGAPGATEIAPRLAFDDGRFTYLHYPKAREIPAVFYIGADGQEGRANYHVDGELVVVQRIAREFVLRLGGAAVRLINDAYDGDGVATPYGTTDGKRRELKQDGK
SIO_010081: HPF_RS23515
subclass of: SO_0000673
so part of: HPF_RS23515
location: 32485..33369
location: region:32485-33369:1
so has part: feature:32485-33369:1:exon

WP_165961775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32485-33369:1:exon

HPF_RS23740
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
gene: virB10
locus tag: HPF_RS23740
old locus tag: HPF_23370
so part of: sequence
location: 33359..34699
location: region:33359-34699:1
so has part: feature:33359-34699:1:exon
subclass of: SO_0000010

position:33359:1
position: 33359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34699:1
position: 34699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33359-34699:1:exon

HPF_RS23740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
gene: virB10
locus tag: HPF_RS23740
old locus tag: HPF_23370
inference: COORDINATES: protein motif:HMM:NF015688.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein VirB10
translation: MANEAITGGIPGPNEAGSFSDDGRPRVNEKTFAVGSPARNVAIATVAALVLLGVATVAWFFVIKPWRDSKDEKPVEVKATRQVFDNTALPFNAPKPAAATGSGDCPVVSLTQTNGQPLIGADGRPITVDCKGKASSQVPAPSGLYQGPTTSGGGERPRPNPYRGGVILKHETVGAASIGVPQLPTLPDLSALQGLIQARAGAGGLSAGAGAGGASGGGDAPRNVRGAVGGMLTATATGDTRAGQLKAMPYLLPKGRQIDCALTTRVISEVSGFASCVLTSNVYSVDGKTLLLERGSEVDGEYQAGMRRGQRRLFVLWNRVRTPNGVFVNLASPNADALGTMGLPGYVDNKWFERIGSAFLLSIVQDAMSHAVGGGGITREYDANGNVRSETDNRRWQNTQDTAGKSVEMVLAEQLGIQPTLYANQGDRVSIYVARDVNFEDVYVRR
SIO_010081: HPF_RS23740
subclass of: SO_0000673
so part of: HPF_RS23740
location: 33359..34699
location: region:33359-34699:1
so has part: feature:33359-34699:1:exon

WP_165961776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33359-34699:1:exon

HPF_RS23530
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
gene: virB11
locus tag: HPF_RS23530
old locus tag: HPF_23375
so part of: sequence
location: 34686..35864
location: region:34686-35864:1
so has part: feature:34686-35864:1:exon
subclass of: SO_0000010

position:34686:1
position: 34686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35864:1
position: 35864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34686-35864:1:exon

HPF_RS23530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
gene: virB11
locus tag: HPF_RS23530
old locus tag: HPF_23375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012428307.1
GO component: GO:0043684 - type IV secretion system complex [Evidence IEA]
GO process: GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type DNA transfer ATPase VirB11
translation: MSAVETPIRPAARVNGPGTGDVPPTVLDRSAVVTNLLARLFAILRRYPGATELVFNRPGEVMIENGARWETVRDDSLTLDWVNGLATTVARFTNQQINSSRPIMSAMLPGGERLQIVLPPAVEPGFASLSLRIPAPSIRSLDDYNSDGYFERFAWGFDEGQYSRRRAEISPTDSALIESLHGRDLMKFFAGAVAAKKNIAVVGDTGSGKTTLMKTLCQLIPTYERLVTIEDVRELFLPNHPNRVHLLYSKGGQGQAQVTPADLIASCMRMKPDRALLAELRGGEAFDFLKLLTTGHAGSITSFHAESCALAFERYVFMAKEHADAGIFDSAVLRRLVSLTIDVIVHVVAVVAHDETGQPRKDRYIKQIHFDPLAKLDAEIGRGATMHQGAGA
SIO_010081: HPF_RS23530
subclass of: SO_0000673
so part of: HPF_RS23530
location: 34686..35864
location: region:34686-35864:1
so has part: feature:34686-35864:1:exon

WP_133158253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34686-35864:1:exon

HPF_RS23535
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23535
old locus tag: HPF_23380
so part of: sequence
location: 35861..37927
location: region:35861-37927:1
so has part: feature:35861-37927:1:exon
subclass of: SO_0000010

position:35861:1
position: 35861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37927:1
position: 37927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35861-37927:1:exon

HPF_RS23535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23535
old locus tag: HPF_23380
inference: COORDINATES: protein motif:HMM:NF014581.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MNAKSWSMLVGGALAVLGIAGTSLWLAAWIYMLTKRQFFADVDFGTFAHLWHQVGHIQSERKALVASYAAAFVGQAAGAAGLVWGAMRKPRELHGSARFANGAEVNKAFPKDSRGIILGKANGRYLEFGGQQFVLLAAPTRSGKGVGVVIPNLLSWPESVIVLDVKQENWDLTSGFRHYVGGQECFLFNPVAADKRTHCWNPLDYVKTDKVFRADSLGVIATLLWPDLPGTDPIWTATPRALFTGIAMMILDVREMEAHENPDFSKPFTLGQIMRETLQDGDGAAYFKGVIDSYAARTFTSKTPGRAGESMALSPETVRALNTYIGIASDNTRAGVMTSFRSRLELWLNPLVDAATSRSDFRFEDFRRKRMSLYVGVAPGDLERLEPLLNLFFKQFFAVNTQDLPQKDASLKHQVLLLLDEFTALGKIPIFTKAIGFIAGYNLRCMPIIQSIAQLRSVYGEDDARTLITNHAVQIVFPPREQRDAKDYSEALGYTTEKGVSKGRSNAPGKAGSSRSENVSDQRRALMLPQELKEMPQTDCIVFAENTKPVRAKKVQYYADKTFTDRLRAASRGKAYATGVDPSKTVLAGARGIPSQADLHEAIRRDELAVTVDPLPVELMSIVAQGGVTPMTMRHVEQGSGPLVETIVGADPAAVRRAVEQVGAGKTEAELMQGVVNLVSAMGFALDF
SIO_010081: HPF_RS23535
subclass of: SO_0000673
so part of: HPF_RS23535
location: 35861..37927
location: region:35861-37927:1
so has part: feature:35861-37927:1:exon

WP_207959453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35861-37927:1:exon

HPF_RS23540
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23540
old locus tag: HPF_23385
so part of: sequence
location: 38437..39750
location: region:38437-39750:1
so has part: feature:38437-39750:1:exon
subclass of: SO_0000010

position:38437:1
position: 38437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39750:1
position: 39750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38437-39750:1:exon

HPF_RS23540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23540
old locus tag: HPF_23385
inference: COORDINATES: protein motif:HMM:NF037421.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPD7 domain-containing protein
translation: MSDQAATPRFKIEYRTASSGAVVSSASYNEPDEALQAYKDAAEAFRAAKLPPGASLSLNDQKLEMHAGAVSEGLGVVRHSWSKEPARERFDALQVSAQDRPEQAALRAAFAGIPRDVEHAGAARAAGGTIEFTERVASKESGPAGANSDRVGGPEDEARVDSLRKRYLRTPDGYHDKQTMELVIADKGSKLVTQREDLATVDAMAVAAADRGWSAVTLSGTEAFRREAWYQLSARGIEVTGYSPTQADKARLAEVQRAQEQESRERAAPAKTATPAKPVAEPQMRSPVEEASNAVRKMASDISIEGSTTPREQLAVSAAANQAYGAAVAANERDRERARGADKGRAAEVAAPVRAAPARPVERALSTDQQVMVAAVDRALRDGGLSAEQRERVREVATKVAAQHPEAKAPRVADRSAIPQPVASPAPQKQAKRDLSR
SIO_010081: HPF_RS23540
subclass of: SO_0000673
so part of: HPF_RS23540
location: 38437..39750
location: region:38437-39750:1
so has part: feature:38437-39750:1:exon

WP_133158254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38437-39750:1:exon

HPF_RS23745
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23745
old locus tag: HPF_23390
so part of: sequence
location: 39825..39998
location: region:39825-39998:1
so has part: feature:39825-39998:1:exon
subclass of: SO_0000010

position:39825:1
position: 39825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39998:1
position: 39998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39825-39998:1:exon

HPF_RS23745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23745
old locus tag: HPF_23390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDTKGIFADDIAKACKIPVERFTGSLVLGVIGDLREVWVTRNPDPSLMQAKFKRVF
SIO_010081: HPF_RS23745
subclass of: SO_0000673
so part of: HPF_RS23745
location: 39825..39998
location: region:39825-39998:1
so has part: feature:39825-39998:1:exon

WP_165961777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39825-39998:1:exon

HPF_RS23545
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23545
old locus tag: HPF_23395
so part of: sequence
location: 40035..40232
location: region:40035-40232:1
so has part: feature:40035-40232:1:exon
subclass of: SO_0000010

position:40035:1
position: 40035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40232:1
position: 40232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40035-40232:1:exon

HPF_RS23545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23545
old locus tag: HPF_23395
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTRVLPSHDVVISKPSHSILELAAFDVVKACSGVFRAEYGGWIVPARNAGRAYAMLERKFKKIS
SIO_010081: HPF_RS23545
subclass of: SO_0000673
so part of: HPF_RS23545
location: 40035..40232
location: region:40035-40232:1
so has part: feature:40035-40232:1:exon

WP_133158255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40035-40232:1:exon

HPF_RS24030
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS24030
old locus tag: HPF_23400
so part of: sequence
location: 40823..41092
location: region:40823-41092:1
so has part: feature:40823-41092:1:exon
subclass of: SO_0000010

position:40823:1
position: 40823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41092:1
position: 41092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40823-41092:1:exon

HPF_RS24030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS24030
old locus tag: HPF_23400
inference: COORDINATES: protein motif:HMM:NF014678.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF192 domain-containing protein
translation: MPHDEGMLFVFPADRVRCLWMRDTPLSLSAAFLDAAGRIVEFMELPALSNEIRCAGQPARYVLEVHRGWFADAGVGVGDTVSGLALDGD
SIO_010081: HPF_RS24030
subclass of: SO_0000673
so part of: HPF_RS24030
location: 40823..41092
location: region:40823-41092:1
so has part: feature:40823-41092:1:exon

WP_243721814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40823-41092:1:exon

HPF_RS23555
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23555
so part of: sequence
location: complement(41331..41546)
location: region:41331-41546:-1
so has part: feature:41331-41546:-1:exon
subclass of: SO_0000010

position:41331:-1
position: 41331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41546:-1
position: 41546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41331-41546:-1:exon

HPF_RS23555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23555
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNHTIYATPLQYLRNTKISLFRVIFCDRESEKSGNATLSSRAPGRRGHRLGVQLLHLVNLASDTPPRKPGL
SIO_010081: HPF_RS23555
subclass of: SO_0000673
so part of: HPF_RS23555
location: complement(41331..41546)
location: region:41331-41546:-1
so has part: feature:41331-41546:-1:exon

WP_133158257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41331-41546:-1:exon

HPF_RS23560
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23560
old locus tag: HPF_23405
so part of: sequence
location: 41573..41824
location: region:41573-41824:1
so has part: feature:41573-41824:1:exon
subclass of: SO_0000010

position:41573:1
position: 41573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41824:1
position: 41824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41573-41824:1:exon

HPF_RS23560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23560
old locus tag: HPF_23405
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNAATTESQVSNKMAAGAMVALRGLVDAKSAVRLERLSVGDATQLKTDEGALRALIGAWAGSHGVSELVEREAEAAIRRWSPA
SIO_010081: HPF_RS23560
subclass of: SO_0000673
so part of: HPF_RS23560
location: 41573..41824
location: region:41573-41824:1
so has part: feature:41573-41824:1:exon

WP_133158258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41573-41824:1:exon

HPF_RS23565
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
gene: ssb
locus tag: HPF_RS23565
old locus tag: HPF_23410
so part of: sequence
location: 41886..42284
location: region:41886-42284:1
so has part: feature:41886-42284:1:exon
subclass of: SO_0000010

position:41886:1
position: 41886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42284:1
position: 42284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41886-42284:1:exon

HPF_RS23565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
gene: ssb
locus tag: HPF_RS23565
old locus tag: HPF_23410
inference: COORDINATES: protein motif:HMM:TIGR00621.2
GO function: GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MAASVNEVRLIGNIGRTPELNYLPSGMPVVDLSVATTSRRKEKETGDRLEKTQWHRVVFYGNTALAVAEYATKSRQVYIEGEIDYDSYEKSGVTHYVTKIFGRSFQLLGPTPAAARGEAPAGGYDQGDDIPG
SIO_010081: HPF_RS23565
subclass of: SO_0000673
so part of: HPF_RS23565
location: 41886..42284
location: region:41886-42284:1
so has part: feature:41886-42284:1:exon

WP_165961779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41886-42284:1:exon

HPF_RS23750
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23750
old locus tag: HPF_23415
so part of: sequence
location: 42321..42458
location: region:42321-42458:1
so has part: feature:42321-42458:1:exon
subclass of: SO_0000010

position:42321:1
position: 42321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42458:1
position: 42458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42321-42458:1:exon

HPF_RS23750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23750
old locus tag: HPF_23415
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVEWNVYVRGRFIGTVHEVNEDAARCAACSKFDIDSEAEISVSRR
SIO_010081: HPF_RS23750
subclass of: SO_0000673
so part of: HPF_RS23750
location: 42321..42458
location: region:42321-42458:1
so has part: feature:42321-42458:1:exon

WP_165961780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42321-42458:1:exon

HPF_RS23570
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23570
old locus tag: HPF_23420
so part of: sequence
location: complement(42513..42734)
location: region:42513-42734:-1
so has part: feature:42513-42734:-1:exon
subclass of: SO_0000010

position:42513:-1
position: 42513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42734:-1
position: 42734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42513-42734:-1:exon

HPF_RS23570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23570
old locus tag: HPF_23420
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRPPIAINAKPETIRNGENRKAQINRFTSTTFLALKIRSEDDPTLPSFNQVRQLAQLRTTPIAPRQLPQKVGD
SIO_010081: HPF_RS23570
subclass of: SO_0000673
so part of: HPF_RS23570
location: complement(42513..42734)
location: region:42513-42734:-1
so has part: feature:42513-42734:-1:exon

WP_133158260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42513-42734:-1:exon

HPF_RS23805
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23805
old locus tag: HPF_23425
so part of: sequence
location: 42894..43532
location: region:42894-43532:1
so has part: feature:42894-43532:1:exon
subclass of: SO_0000010

position:42894:1
position: 42894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43532:1
position: 43532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42894-43532:1:exon

HPF_RS23805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23805
old locus tag: HPF_23425
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNAPTPDEIAGMAWWNLLPEHDRTHWMSRAGDTGRAADAWAVFKRESFSGGDMTENPNAGAAALPPAMQAPMVSSHPDPEVRAAFNRMYEERARREAERPKVDAEGREALGRLFKVAQSDTGQARRVAAFLLGCYNGERFPFDLTDFRGLDYGLFDDCLLVLRMDYQPRQEVHRYFDQGGLRFEQLAKDHGLTDVYKLRRELDDLRAGRGPG
SIO_010081: HPF_RS23805
subclass of: SO_0000673
so part of: HPF_RS23805
location: 42894..43532
location: region:42894-43532:1
so has part: feature:42894-43532:1:exon

WP_207959455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42894-43532:1:exon

HPF_RS24125
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS24125
so part of: sequence
location: 43559..43681
location: region:43559-43681:1
so has part: feature:43559-43681:1:exon
subclass of: SO_0000010

position:43559:1
position: 43559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43681:1
position: 43681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43559-43681:1:exon

HPF_RS24125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS24125
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLFARLFKGAVGALAFVIGLGIVLSIVSVLVAVAKSALGW
SIO_010081: HPF_RS24125
subclass of: SO_0000673
so part of: HPF_RS24125
location: 43559..43681
location: region:43559-43681:1
so has part: feature:43559-43681:1:exon

WP_279512616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43559-43681:1:exon

HPF_RS23580
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23580
old locus tag: HPF_23430
so part of: sequence
location: 43750..44193
location: region:43750-44193:1
so has part: feature:43750-44193:1:exon
subclass of: SO_0000010

position:43750:1
position: 43750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44193:1
position: 44193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43750-44193:1:exon

HPF_RS23580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23580
old locus tag: HPF_23430
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKLEFVQRLDAGPLRVSDATADLWYHLLSWVDTHGYADTADSPDFVKYVQDFRTVGVPTINKHLSRMAAAKFLQGHRLARRLSPESREDMSSPVHNIIFGTGLASLPTSFKRYTLPGVPCPKVFRALERVEANEQKVLADFAGSSA
SIO_010081: HPF_RS23580
subclass of: SO_0000673
so part of: HPF_RS23580
location: 43750..44193
location: region:43750-44193:1
so has part: feature:43750-44193:1:exon

WP_133158261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43750-44193:1:exon

HPF_RS23585
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23585
so part of: sequence
location: 44308..44700
location: region:44308-44700:1
so has part: feature:44308-44700:1:exon
subclass of: SO_0000010

position:44308:1
position: 44308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44700:1
position: 44700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44308-44700:1:exon

HPF_RS23585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23585
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTRREATAAEFYSAMATRRWSEARRTGAFRVLVLGEKARDVAEVVGLTKDGVSQAADQAYAVVEAWRLRQLGAADVDPAGLTGLVEGIQRLVVRATAAAGAAGEGELQVALRKSVHLLQSAADELRPHT
SIO_010081: HPF_RS23585
subclass of: SO_0000673
so part of: HPF_RS23585
location: 44308..44700
location: region:44308-44700:1
so has part: feature:44308-44700:1:exon

WP_133158262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44308-44700:1:exon

HPF_RS23590
type: Gene
subclass of: SO_0000704
RO_0002162: 47421
locus tag: HPF_RS23590
so part of: sequence
location: 44708..45049
location: region:44708-45049:1
so has part: feature:44708-45049:1:exon
subclass of: SO_0000010

position:44708:1
position: 44708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45049:1
position: 45049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44708-45049:1:exon

HPF_RS23590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 47421
locus tag: HPF_RS23590
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTKKRCTAEQFDLAVRDRQFTDARKAAARRVLVDGEAANDVASTSDVPIHSLRQAVRMIFSAVEAQFSTVNPARAPRPGYVIFTVEVPELASAGLVAGVASSGGIVIGERRG
SIO_010081: HPF_RS23590
subclass of: SO_0000673
so part of: HPF_RS23590
location: 44708..45049
location: region:44708-45049:1
so has part: feature:44708-45049:1:exon

WP_133158263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44708-45049:1:exon