Pantoea eucrina strain XL123 plasmid unnamed2, complete sequence.
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Erwiniaceae; Pantoea.
Submitted (13-SEP-2021) College of Resources and Environmental Sciences, Nanjing Agricultural University, Weigang1#, Nanjing, Jiangsu 210095, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP083450.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Celera Assembler v. March-2019\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 120.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/26/2023 07:05:00\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,634\nCDSs (total) :: 3,527\nGenes (coding) :: 3,463\nCDSs (with protein) :: 3,463\nGenes (RNA) :: 107\nrRNAs :: 8, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 7, 7 (5S, 16S, 23S)\ntRNAs :: 80\nncRNAs :: 5\nPseudo Genes (total) :: 64\nCDSs (without protein) :: 64\nPseudo Genes (ambiguous residues) :: 0 of 64\nPseudo Genes (frameshifted) :: 28 of 64\nPseudo Genes (incomplete) :: 32 of 64\nPseudo Genes (internal stop) :: 15 of 64\nPseudo Genes (multiple problems) :: 10 of 64\nPseudo Genes (short protein) :: 1 of 64\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_010260909.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010260911.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
iron chelate uptake ABC transporter family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_003858120.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010260926.1
COORDINATES: similar to AA sequence:RefSeq:WP_008107606.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007893864.1
COORDINATES: similar to AA sequence:RefSeq:WP_009654131.1
COORDINATES: similar to AA sequence:RefSeq:WP_004135342.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017346767.1
COORDINATES: similar to AA sequence:RefSeq:WP_001049311.1
COORDINATES: similar to AA sequence:RefSeq:WP_008104130.1
COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1
GO:0004803 - transposase activity [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007892540.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013025627.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007891705.1
GO:0047470 - (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity [Evidence IEA]
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007733217.1
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
malto-oligosyltrehalose trehalohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_017494021.1
COORDINATES: similar to AA sequence:RefSeq:WP_017459156.1
COORDINATES: similar to AA sequence:RefSeq:WP_013196165.1
glycine betaine/L-proline transporter ProP
COORDINATES: similar to AA sequence:RefSeq:WP_003858865.1
COORDINATES: similar to AA sequence:RefSeq:WP_002435738.1
COORDINATES: similar to AA sequence:RefSeq:WP_012733638.1
COORDINATES: similar to AA sequence:RefSeq:WP_017345758.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244858.1
COORDINATES: similar to AA sequence:RefSeq:WP_004386807.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003855172.1
COORDINATES: similar to AA sequence:RefSeq:WP_003180976.1
COORDINATES: protein motif:HMM:NF014386.2
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_010670555.1
COORDINATES: similar to AA sequence:RefSeq:WP_013028043.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007891860.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012053446.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007894067.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008103162.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007890020.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
H-NS family nucleoid-associated regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_008109489.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015344 - siderophore uptake transmembrane transporter activity [Evidence IEA]; GO:0038023 - signaling receptor activity [Evidence IEA]
ferric-rhodotorulic acid/ferric-coprogen receptor FhuE
COORDINATES: similar to AA sequence:RefSeq:WP_007890358.1
COORDINATES: similar to AA sequence:RefSeq:WP_003855089.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:YP_005227171.1
GO:0008152 - metabolic process [Evidence IEA]
This protein belongs to a clade of FMN-dependent monooxygenases, within a broader family of flavin-dependent oxidoreductases, the luciferase-like monooxygenase (LMM) family, some of whose members use coenzyme F420 rather than FMN.; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
NtaA/DmoA family FMN-dependent monooxygenase
COORDINATES: similar to AA sequence:RefSeq:WP_009128461.1
COORDINATES: similar to AA sequence:RefSeq:WP_013027190.1
COORDINATES: similar to AA sequence:RefSeq:WP_006118146.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009128455.1
COORDINATES: similar to AA sequence:RefSeq:WP_013512712.1
COORDINATES: similar to AA sequence:RefSeq:WP_017346724.1
GO:0047429 - nucleoside triphosphate diphosphatase activity [Evidence IEA]
GO:0009143 - nucleoside triphosphate catabolic process [Evidence IEA]
non-canonical purine NTP pyrophosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_010618046.1
COORDINATES: similar to AA sequence:RefSeq:WP_010430597.1
COORDINATES: similar to AA sequence:RefSeq:WP_007901065.1
COORDINATES: similar to AA sequence:RefSeq:WP_009128419.1
GO:0009055 - electron transfer activity [Evidence IEA]
GO:0022904 - respiratory electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013511182.1
COORDINATES: similar to AA sequence:RefSeq:WP_013511183.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014333028.1
autotransporter domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:YP_005227580.1
COORDINATES: similar to AA sequence:RefSeq:WP_014831825.1
COORDINATES: similar to AA sequence:RefSeq:WP_008924572.1
COORDINATES: similar to AA sequence:RefSeq:WP_008107499.1
COORDINATES: similar to AA sequence:RefSeq:WP_017490113.1
GO:0015495 - gamma-aminobutyric acid:proton symporter activity [Evidence IEA]
GO:0009450 - gamma-aminobutyric acid catabolic process [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007892997.1
GO:0003867 - 4-aminobutyrate transaminase activity [Evidence IEA]
GO:0009450 - gamma-aminobutyric acid catabolic process [Evidence IEA]
4-aminobutyrate--2-oxoglutarate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_008107492.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017490068.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017802287.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
diaminobutyrate--2-oxoglutarate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_007892991.1
COORDINATES: similar to AA sequence:RefSeq:WP_013511633.1
GO:0008483 - transaminase activity [Evidence IEA]
UDP-4-amino-4-deoxy-L-arabinose aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013027836.1
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
COORDINATES: similar to AA sequence:RefSeq:WP_014598157.1
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA
COORDINATES: similar to AA sequence:RefSeq:WP_006121945.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase
COORDINATES: similar to AA sequence:RefSeq:WP_008107427.1
GO:0000030 - mannosyltransferase activity [Evidence IEA]; GO:0016763 - pentosyltransferase activity [Evidence IEA]
GO:0006493 - protein O-linked glycosylation [Evidence IEA]
lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007892984.1
4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE
COORDINATES: similar to AA sequence:RefSeq:WP_006121942.1
4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF
COORDINATES: similar to AA sequence:RefSeq:WP_008106284.1
COORDINATES: similar to AA sequence:RefSeq:WP_008924715.1
COORDINATES: similar to AA sequence:RefSeq:WP_008106279.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015173 - aromatic amino acid transmembrane transporter activity [Evidence IEA]
GO:0015801 - aromatic amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016975025.1
GO:0019628 - urate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008106250.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: protein motif:HMM:NF014661.2
COORDINATES: similar to AA sequence:RefSeq:WP_001252048.1
COORDINATES: similar to AA sequence:RefSeq:WP_014593715.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1
GO:0015144 - carbohydrate transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
maltose/maltodextrin ABC transporter substrate-binding protein MalE
COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
maltose/maltodextrin ABC transporter ATP-binding protein MalK
COORDINATES: similar to AA sequence:RefSeq:WP_008924724.1
COORDINATES: similar to AA sequence:RefSeq:WP_019105216.1
GO:0042597 - periplasmic space [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007885965.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012126377.1
GO:0008184 - glycogen phosphorylase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009093041.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015964713.1
COORDINATES: similar to AA sequence:RefSeq:WP_017801749.1
COORDINATES: similar to AA sequence:RefSeq:WP_005162529.1
COORDINATES: similar to AA sequence:RefSeq:WP_005188495.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_010396125.1
GO:0018467 - formaldehyde dehydrogenase activity [Evidence IEA]
GO:0046292 - formaldehyde metabolic process [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
formaldehyde dehydrogenase, glutathione-independent
COORDINATES: similar to AA sequence:RefSeq:WP_013357826.1
DCC1-like thiol-disulfide oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008924559.1
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010670557.1
xanthine dehydrogenase family protein subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_014333021.1
COORDINATES: similar to AA sequence:RefSeq:WP_013512697.1
COORDINATES: similar to AA sequence:RefSeq:WP_008499468.1
gamma-glutamylcyclotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014169761.1
COORDINATES: similar to AA sequence:RefSeq:WP_004102954.1
COORDINATES: similar to AA sequence:RefSeq:WP_008110759.1
GO:0015474 - autotransporter activity [Evidence IEA]
GO:0046819 - protein secretion by the type V secretion system [Evidence IEA]
autotransporter outer membrane beta-barrel domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015377607.1
GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013202164.1
COORDINATES: similar to AA sequence:RefSeq:WP_004169796.1
GO:0008924 - malate dehydrogenase (quinone) activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008105699.1
COORDINATES: similar to AA sequence:RefSeq:WP_008105698.1
COORDINATES: similar to AA sequence:RefSeq:WP_007885872.1
COORDINATES: similar to AA sequence:RefSeq:WP_013358398.1
COORDINATES: similar to AA sequence:RefSeq:WP_004171024.1
COORDINATES: similar to AA sequence:RefSeq:WP_017492816.1
COORDINATES: similar to AA sequence:RefSeq:WP_003855073.1
COORDINATES: similar to AA sequence:RefSeq:WP_009636530.1
lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014063926.1
COORDINATES: similar to AA sequence:RefSeq:NP_312468.1
COORDINATES: similar to AA sequence:RefSeq:NP_308490.1
COORDINATES: protein motif:HMM:NF025345.2
COORDINATES: protein motif:HMM:NF025069.2
COORDINATES: similar to AA sequence:RefSeq:WP_013510449.1
COORDINATES: similar to AA sequence:RefSeq:WP_010247283.1
COORDINATES: similar to AA sequence:RefSeq:WP_012124797.1
COORDINATES: similar to AA sequence:RefSeq:WP_014729029.1
COORDINATES: similar to AA sequence:RefSeq:WP_008106889.1
COORDINATES: similar to AA sequence:RefSeq:NP_308385.2
GO:0008802 - betaine-aldehyde dehydrogenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0019285 - glycine betaine biosynthetic process from choline [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017455818.1
GO:0008812 - choline dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017346731.1
COORDINATES: similar to AA sequence:RefSeq:NP_248822.1
COORDINATES: similar to AA sequence:RefSeq:WP_004918734.1
COORDINATES: similar to AA sequence:RefSeq:WP_008108835.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012723541.1
COORDINATES: similar to AA sequence:RefSeq:WP_004928621.1
COORDINATES: similar to AA sequence:RefSeq:WP_004963040.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_015703490.1
COORDINATES: similar to AA sequence:RefSeq:WP_017346675.1
COORDINATES: similar to AA sequence:RefSeq:WP_015703492.1
COORDINATES: similar to AA sequence:RefSeq:WP_015703493.1
COORDINATES: similar to AA sequence:RefSeq:WP_004963017.1
COORDINATES: similar to AA sequence:RefSeq:WP_010618917.1
COORDINATES: similar to AA sequence:RefSeq:WP_006661099.1
COORDINATES: similar to AA sequence:RefSeq:WP_008102076.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008102081.1
COORDINATES: similar to AA sequence:RefSeq:WP_009309842.1
COORDINATES: similar to AA sequence:RefSeq:WP_015964404.1
COORDINATES: similar to AA sequence:RefSeq:WP_003855058.1
COORDINATES: similar to AA sequence:RefSeq:WP_003848189.1
COORDINATES: similar to AA sequence:RefSeq:WP_008101910.1
COORDINATES: similar to AA sequence:RefSeq:WP_008101943.1
COORDINATES: similar to AA sequence:RefSeq:WP_013027955.1
COORDINATES: similar to AA sequence:RefSeq:WP_008109389.1
COORDINATES: similar to AA sequence:RefSeq:WP_013511445.1
COORDINATES: similar to AA sequence:RefSeq:WP_015683482.1
COORDINATES: similar to AA sequence:RefSeq:WP_012145838.1
COORDINATES: similar to AA sequence:RefSeq:WP_008109395.1
COORDINATES: similar to AA sequence:RefSeq:WP_013813627.1
COORDINATES: similar to AA sequence:RefSeq:WP_008109398.1
COORDINATES: similar to AA sequence:RefSeq:WP_009090178.1
COORDINATES: similar to AA sequence:RefSeq:WP_000460598.1
COORDINATES: similar to AA sequence:RefSeq:WP_008109414.1
COORDINATES: similar to AA sequence:RefSeq:WP_008110101.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008110103.1
COORDINATES: similar to AA sequence:RefSeq:WP_009092983.1
COORDINATES: similar to AA sequence:RefSeq:WP_013196254.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006482443.1
zinc-binding alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009128294.1
COORDINATES: similar to AA sequence:RefSeq:WP_008110796.1
COORDINATES: similar to AA sequence:RefSeq:WP_010247479.1
COORDINATES: similar to AA sequence:RefSeq:WP_009093096.1
COORDINATES: similar to AA sequence:RefSeq:WP_014598218.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017801776.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_007424955.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_007891239.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004962802.1
glycine zipper 2TM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010615675.1
COORDINATES: similar to AA sequence:RefSeq:WP_013575679.1
COORDINATES: similar to AA sequence:RefSeq:WP_007891231.1
COORDINATES: similar to AA sequence:RefSeq:WP_008108081.1
COORDINATES: similar to AA sequence:RefSeq:WP_016161364.1
COORDINATES: similar to AA sequence:RefSeq:WP_016191435.1
COORDINATES: similar to AA sequence:RefSeq:WP_012145023.1
COORDINATES: similar to AA sequence:RefSeq:WP_013511275.1
COORDINATES: similar to AA sequence:RefSeq:WP_013812771.1
COORDINATES: similar to AA sequence:RefSeq:WP_017798887.1
COORDINATES: similar to AA sequence:RefSeq:WP_017798888.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004385700.1
COORDINATES: similar to AA sequence:RefSeq:WP_007682198.1
COORDINATES: similar to AA sequence:RefSeq:WP_013196273.1
phage antirepressor KilAC domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013511268.1
COORDINATES: similar to AA sequence:RefSeq:WP_008108045.1
COORDINATES: similar to AA sequence:RefSeq:WP_008108042.1
COORDINATES: similar to AA sequence:RefSeq:WP_008108040.1
GO:0045436 - lycopene beta cyclase activity [Evidence IEA]
GO:0016117 - carotenoid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010615650.1
COORDINATES: similar to AA sequence:RefSeq:WP_008108035.1
phytoene/squalene synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007889748.1
COORDINATES: similar to AA sequence:RefSeq:WP_013511229.1
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014598235.1
GO:0004359 - glutaminase activity [Evidence IEA]
GO:0006541 - glutamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013027987.1
COORDINATES: similar to AA sequence:RefSeq:WP_013511225.1
COORDINATES: similar to AA sequence:RefSeq:WP_010616677.1
COORDINATES: similar to AA sequence:RefSeq:WP_017799524.1
COORDINATES: similar to AA sequence:RefSeq:WP_006121972.1
COORDINATES: similar to AA sequence:RefSeq:WP_004179386.1
COORDINATES: similar to AA sequence:RefSeq:WP_015704940.1
COORDINATES: similar to AA sequence:RefSeq:WP_010286387.1
COORDINATES: similar to AA sequence:RefSeq:WP_010253502.1
COORDINATES: similar to AA sequence:RefSeq:WP_014599308.1
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_007781649.1
COORDINATES: similar to AA sequence:RefSeq:WP_013196241.1
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010247153.1
COORDINATES: similar to AA sequence:RefSeq:WP_008106220.1
COORDINATES: similar to AA sequence:RefSeq:WP_015701121.1
predicted Zn-dependent protease with a strongly conserved HExxH motif; Derived by automated computational analysis using gene prediction method: Protein Homology.
DUF2268 domain-containing putative Zn-dependent protease
COORDINATES: similar to AA sequence:RefSeq:WP_010247492.1
COORDINATES: similar to AA sequence:RefSeq:WP_014766658.1
COORDINATES: similar to AA sequence:RefSeq:WP_017346180.1
COORDINATES: similar to AA sequence:RefSeq:WP_005121271.1
COORDINATES: similar to AA sequence:RefSeq:WP_006175701.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014883721.1
COORDINATES: similar to AA sequence:RefSeq:WP_020457379.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349170.1
COORDINATES: similar to AA sequence:RefSeq:WP_004210708.1
GO:0008721 - D-serine ammonia-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0046416 - D-amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010634575.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
DNA-binding transcriptional regulator DsdC
COORDINATES: similar to AA sequence:RefSeq:WP_010671422.1
COORDINATES: similar to AA sequence:RefSeq:WP_000457592.1
COORDINATES: similar to AA sequence:RefSeq:WP_006785986.1
COORDINATES: similar to AA sequence:RefSeq:WP_006785987.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007708050.1
COORDINATES: similar to AA sequence:RefSeq:WP_007708053.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020239536.1
heavy metal response regulator transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_004098940.1
GO:0006825 - copper ion transport [Evidence IEA]
copper homeostasis membrane protein CopD
COORDINATES: similar to AA sequence:RefSeq:WP_007708063.1
GO:0005507 - copper ion binding [Evidence IEA]
copper homeostasis periplasmic binding protein CopC
COORDINATES: similar to AA sequence:RefSeq:WP_008151328.1
COORDINATES: similar to AA sequence:RefSeq:WP_001176305.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]
copper resistance system multicopper oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_004388333.1
COORDINATES: similar to AA sequence:RefSeq:WP_001183767.1
four-helix bundle copper-binding protein
COORDINATES: protein motif:HMM:NF023227.2
COORDINATES: protein motif:HMM:NF024830.2
COORDINATES: similar to AA sequence:RefSeq:WP_013511217.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014403644.1
COORDINATES: similar to AA sequence:RefSeq:WP_006221454.1
COORDINATES: similar to AA sequence:RefSeq:WP_008109210.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013028010.1
COORDINATES: similar to AA sequence:RefSeq:WP_007886082.1
COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1
COORDINATES: similar to AA sequence:RefSeq:WP_012769168.1
COORDINATES: similar to AA sequence:RefSeq:WP_002440039.1
NTP transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013195974.1
COORDINATES: similar to AA sequence:RefSeq:WP_014604568.1
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]
RepB family plasmid replication initiator protein
COORDINATES: similar to AA sequence:RefSeq:WP_003855844.1
COORDINATES: similar to AA sequence:RefSeq:WP_009092747.1
COORDINATES: similar to AA sequence:RefSeq:WP_013024996.1
COORDINATES: similar to AA sequence:RefSeq:WP_019105858.1
COORDINATES: similar to AA sequence:RefSeq:WP_013511876.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010246992.1
COORDINATES: similar to AA sequence:RefSeq:WP_007885202.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012885625.1
GO:0008270 - zinc ion binding [Evidence IEA]
DksA/TraR family C4-type zinc finger protein
COORDINATES: similar to AA sequence:RefSeq:WP_010615780.1
COORDINATES: similar to AA sequence:RefSeq:WP_004131177.1
COORDINATES: similar to AA sequence:RefSeq:WP_013511852.1
molybdenum cofactor-independent xanthine hydroxylase subunit HpxD
COORDINATES: similar to AA sequence:RefSeq:WP_013511851.1
COORDINATES: similar to AA sequence:RefSeq:WP_013028064.1
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007886008.1
COORDINATES: similar to AA sequence:RefSeq:WP_007888373.1
COORDINATES: similar to AA sequence:RefSeq:WP_010670430.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]
SOS response-associated peptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013356609.1
COORDINATES: similar to AA sequence:RefSeq:WP_000218185.1
GO:0036524 - protein deglycase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010671948.1
COORDINATES: similar to AA sequence:RefSeq:WP_014333035.1
COORDINATES: similar to AA sequence:RefSeq:WP_013512831.1
COORDINATES: similar to AA sequence:RefSeq:WP_013512830.1
COORDINATES: similar to AA sequence:RefSeq:WP_017345766.1
COORDINATES: similar to AA sequence:RefSeq:WP_013512826.1
COORDINATES: similar to AA sequence:RefSeq:WP_017345774.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015741246.1
COORDINATES: similar to AA sequence:RefSeq:WP_010245445.1
COORDINATES: similar to AA sequence:RefSeq:WP_003837373.1
COORDINATES: similar to AA sequence:RefSeq:WP_015367637.1
COORDINATES: similar to AA sequence:RefSeq:WP_010615791.1
COORDINATES: similar to AA sequence:RefSeq:WP_003848974.1
COORDINATES: similar to AA sequence:RefSeq:WP_008106420.1
COORDINATES: protein motif:HMM:NF024176.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013813663.1
COORDINATES: similar to AA sequence:RefSeq:WP_004946619.1
GO:0003871 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003852463.1
COORDINATES: similar to AA sequence:RefSeq:WP_008926892.1
COORDINATES: similar to AA sequence:RefSeq:WP_003848235.1
COORDINATES: protein motif:HMM:NF022234.2
COORDINATES: similar to AA sequence:RefSeq:WP_017348631.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259132.1
COORDINATES: protein motif:HMM:TIGR01414.1
COORDINATES: similar to AA sequence:RefSeq:WP_017254834.1
COORDINATES: similar to AA sequence:RefSeq:WP_017492309.1
COORDINATES: similar to AA sequence:RefSeq:WP_017800382.1
COORDINATES: similar to AA sequence:RefSeq:WP_007678358.1
COORDINATES: similar to AA sequence:RefSeq:WP_014883717.1
COORDINATES: similar to AA sequence:RefSeq:WP_014883716.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_019332183.1
COORDINATES: protein motif:HMM:NF012312.2
COORDINATES: similar to AA sequence:RefSeq:WP_004103612.1
COORDINATES: similar to AA sequence:RefSeq:WP_013511507.1
COORDINATES: similar to AA sequence:RefSeq:WP_003244504.1
COORDINATES: similar to AA sequence:RefSeq:WP_017348272.1