Pantoea deleyi strain LMG24200 plasmid Plas3, complete sequence.
type: Entry
definition: Pantoea deleyi strain LMG24200 plasmid Plas3, complete sequence.
sequence version: NZ_CP071408.1
sequence date: 2023-04-07
sequence: sequence
division: CON
label: NZ_CP071408.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN18103995
keyword: RefSeq
source: Pantoea deleyi
organism: Pantoea deleyi
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Erwiniaceae; Pantoea.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP071408.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 20-FEB-2021\nAssembly Method :: Unicycler v. v0.4.8\nAssembly Name :: LMG24200\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 290x\nSequencing Technology :: Oxford Nanopore PromethION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/07/2023 05:38:31\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,362\nCDSs (total) :: 4,252\nGenes (coding) :: 4,205\nCDSs (with protein) :: 4,205\nGenes (RNA) :: 110\nrRNAs :: 8, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 7, 7 (5S, 16S, 23S)\ntRNAs :: 77\nncRNAs :: 11\nPseudo Genes (total) :: 47\nCDSs (without protein) :: 47\nPseudo Genes (ambiguous residues) :: 0 of 47\nPseudo Genes (frameshifted) :: 21 of 47\nPseudo Genes (incomplete) :: 30 of 47\nPseudo Genes (internal stop) :: 14 of 47\nPseudo Genes (multiple problems) :: 15 of 47\nPseudo Genes (short protein) :: 1 of 47\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 86780
topology: circular
so has quality: SO_0000988
location: 1..86780
location: region:1-86780:1
RO_0002162: 470932

NZ_CP071408
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN18103995
type: BioSample
SIO_000068: biosample

1
title: Genome sequence of soft rot disease pathogen
author: Rong, C.
author: Liu, Y.
journal: Unpublished

2
title: Direct Submission
author: Rong, C.
author: Liu, Y.
journal: Submitted (02-MAR-2021) Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, shuguanghuayuan road, beijing 100097, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86780:1
position: 86780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-86780:1:source
so part of: sequence
organism: Pantoea deleyi
mol type: genomic DNA
strain: LMG24200
host: mushroom
type material: type strain of Pantoea deleyi
plasmid: Plas3
collection date: 2007

470932
type: Taxonomy
SIO_000068: taxonomy

J1C59_RS21830
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21830
so part of: sequence
location: join(85537..86780,1..13)
location: region:1-86780:1
so has part: feature:85537-86780:1:exon
so has part: feature:1-13:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:85537-86780:1:exon

position:85537:1
position: 85537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-13:1:exon

position:13:1
position: 13
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

J1C59_RS21830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21830
EC number: 2.3.1.-
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: acyltransferase family protein
translation: MSLATLVATFCFYLPDDFLAYLHSGKYNALLLSNQFFARQSAAYASPAADLFPLLHTWSLAIEWQWYLFLPLGILLTGAALRLKSIQRESPNQTKVFAAVWFILTPLAAAIALILSSKEADYAYYSLLTRIFEFMVGGAAFFLTRYVKSISLFISNGLSILSLVVLLYISIQPDVISFYPNVYALLVVTASALIMFTGTFGNSVASKLLGLSPVAFTGRISYSLYLWHWPVLAIARYLGYDIAGSTLLLCLTLTVLLSVISYYLVEQPCRGLRWPLKYTIPLLIIVPIVIFSAAFKYAENHDGMPGRFGAEYDRVAHNVSSGLAQAGHRPDCLDGSQNADRCVFGDLKGQKTALLIGDSHSNHFWGFFDVLAQDAHIRMTAFSTALCLALPDTYLYDWWSFRNRTFDKCHDNTASIMS
SIO_010081: J1C59_RS21830
subclass of: SO_0000673
so part of: J1C59_RS21830
location: join(85537..86780,1..13)
location: region:1-86780:1
so has part: feature:85537-86780:1:exon
so has part: feature:1-13:1:exon

WP_277933484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85537-86780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-13:1:exon

J1C59_RS21360
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21360
so part of: sequence
location: 13..525
location: region:13-525:1
so has part: feature:13-525:1:exon
subclass of: SO_0000010

position:525:1
position: 525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13-525:1:exon

J1C59_RS21360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21360
inference: COORDINATES: protein motif:HMM:NF039218.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SGNH hydrolase domain-containing protein
translation: MAKNHYNYVILGQVWEWYVSGPHIINHPGDERSDALTKARFSKAIRQSLNAIVSSGARPVIVRTIAPMPVNYQKCIRHHVIFREPYRMNECDNQNPRSPEGEWTLPLFDQLQKEFPTLIVIDPKKVQCENGFCATALDGIPVYRDVGHLNDFASYRFGQEFLRKYANPLN
SIO_010081: J1C59_RS21360
subclass of: SO_0000673
so part of: J1C59_RS21360
location: 13..525
location: region:13-525:1
so has part: feature:13-525:1:exon

WP_277933485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13-525:1:exon

J1C59_RS21365
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21365
so part of: sequence
location: complement(558..1499)
location: region:558-1499:-1
so has part: feature:558-1499:-1:exon
subclass of: SO_0000010

position:558:-1
position: 558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499:-1
position: 1499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558-1499:-1:exon

J1C59_RS21365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21365
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MISHNYNCYTRLYKRKLEQEFGADYVSSLDVSERLFPLVYICLKHRRIPSLKRKVLVSKENEVKLSGNPKWKLLKSRIENGDDINNYVSKKTRKWYESDYLLYSCNIYHIHLRSSKAGGIGDELIYAIVRNDSLYIIKYGNHHDIFLPGDLIKECEKEWPGLHFEINVGEGESSTYSDHGFFKQNATDPRLGFNLLKPAGFIDEVSGEKKFISNHANTAIIEFKHEEDSWILPFKCALAFDYEEKLIYKCMDEIKYRLGVYPDSLELDSERRVYIFKVPTAKGYGDYCLIEKHAPQTLTVSFPSDEANLNWHL
SIO_010081: J1C59_RS21365
subclass of: SO_0000673
so part of: J1C59_RS21365
location: complement(558..1499)
location: region:558-1499:-1
so has part: feature:558-1499:-1:exon

WP_128085377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558-1499:-1:exon

J1C59_RS21370
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
gene: umuC
locus tag: J1C59_RS21370
so part of: sequence
location: complement(1562..2824)
location: region:1562-2824:-1
so has part: feature:1562-2824:-1:exon
subclass of: SO_0000010

position:1562:-1
position: 1562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2824:-1
position: 2824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1562-2824:-1:exon

J1C59_RS21370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
gene: umuC
locus tag: J1C59_RS21370
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010671421.1
GO function: GO:0003684 - damaged DNA binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translesion error-prone DNA polymerase V subunit UmuC
translation: MFALADANNFYASCETVFRPDLRGKPIVVVSNNDGCVIARSAEAKRLGIKMAAPLFLNERFFRQNGVHVFSSNYELYGDMSARMMAILGEMAAGQEVYSIDESFLDVSGIGNLIPLETLGHQMRERIRKETGLIIGVGFGPTKTLAKLANNAAKKWTQTKGVVDLSSRTRQRKLLHLTDVGDIWGIGPRITKRMYQLGITTALQLADSNISMIRKNFDVIVERTTRELNGESCIALEDVPPPKQHILNSRSFGERITVLEDMNQAVVLYATRAAEKLREQNSRCRHISVSIATARHGNEPQYSNTASRICDYPTNDTRDIIGEALRGLSSIWREGYRYAKAGVMLGDFYQSGVTQFDMFSEQQPRANADALMAALDAINRSGKGKVWFAGQGDRDSAWQMKRQMLSPRYTTRLKDIPKIK
SIO_010081: J1C59_RS21370
subclass of: SO_0000673
so part of: J1C59_RS21370
location: complement(1562..2824)
location: region:1562-2824:-1
so has part: feature:1562-2824:-1:exon

WP_128085378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1562-2824:-1:exon

J1C59_RS21375
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21375
so part of: sequence
location: complement(2827..3204)
location: region:2827-3204:-1
so has part: feature:2827-3204:-1:exon
subclass of: SO_0000010

position:2827:-1
position: 2827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3204:-1
position: 3204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2827-3204:-1:exon

J1C59_RS21375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010671422.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S24 family peptidase
translation: MAFQSPAQNYTETRLNLGDLVHLSPYSTYLMRSESDCPAAGILKGSVLAIDRALTPAHGQLIVAEFEGELTLRRLLLNPVPALHALDVDETIALLDVSQPLPVWGVVAYALTDVAGIGFNGPAGE
SIO_010081: J1C59_RS21375
subclass of: SO_0000673
so part of: J1C59_RS21375
location: complement(2827..3204)
location: region:2827-3204:-1
so has part: feature:2827-3204:-1:exon

WP_128085379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2827-3204:-1:exon

J1C59_RS21380
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
gene: repA
locus tag: J1C59_RS21380
so part of: sequence
location: complement(4287..5150)
location: region:4287-5150:-1
so has part: feature:4287-5150:-1:exon
subclass of: SO_0000010

position:4287:-1
position: 4287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5150:-1
position: 5150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4287-5150:-1:exon

J1C59_RS21380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
gene: repA
locus tag: J1C59_RS21380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001670144.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication initiator RepA
translation: MKQLTENTSFYRQVKNPNPEFVPEQGKKTLPFCEKIREKAAGFTQRMEFQSLVAMSIARGERKRRPPELRIRALEASLQALCHYFNPLANRVGASLTTMSIRCGLATEKKRLSITRFTGACHTLEQLKLITYNTEYCKEIGCNIPTDITFTPLMWQVLDVSEEAVAAARRSRIEWENRQREKKGLPRADAGELIGAAWSFVRERFREYQKSRREHGMKRHRARKDAPRTRKDIEQLVRLQLQKEIRNGRFFGSLDAVRTEIERRVTERMKLSRGHYTRLGDDLLVTT
SIO_010081: J1C59_RS21380
subclass of: SO_0000673
so part of: J1C59_RS21380
location: complement(4287..5150)
location: region:4287-5150:-1
so has part: feature:4287-5150:-1:exon

WP_128085387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4287-5150:-1:exon

J1C59_RS21385
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
gene: repA
locus tag: J1C59_RS21385
so part of: sequence
location: complement(5455..5691)
location: region:5455-5691:-1
so has part: feature:5455-5691:-1:exon
subclass of: SO_0000010

position:5455:-1
position: 5455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5691:-1
position: 5691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5455-5691:-1:exon

J1C59_RS21385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
gene: repA
locus tag: J1C59_RS21385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012439780.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication regulatory protein RepA
translation: MPQTESRTQSEVKPSRPAPLSPRERKMRSVARKRETHSPLNVFIHNSTKQKLDEICRESGLTQAEAIERLIEGNKSSD
SIO_010081: J1C59_RS21385
subclass of: SO_0000673
so part of: J1C59_RS21385
location: complement(5455..5691)
location: region:5455-5691:-1
so has part: feature:5455-5691:-1:exon

WP_128085380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5455-5691:-1:exon

J1C59_RS21390
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21390
so part of: sequence
location: complement(5835..6368)
location: region:5835-6368:-1
so has part: feature:5835-6368:-1:exon
subclass of: SO_0000010

position:5835:-1
position: 5835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6368:-1
position: 6368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5835-6368:-1:exon

J1C59_RS21390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016266442.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipase D family protein
translation: MKLNLRIVATALWLTLSTGAAVAAPSIDAGFSPEGSAQQLVLRTLDDAQQSIRLMGYSFTSPEVVKSLVAAKRRGVDVRVVVDEKGNRNKASQAAMNVVVNAGIPLRTNGQYKIMHDKVIITDGQNVELGSFNYSRSAAESNSENALVVREIPALAQTYLAHWQSRWEGGTDWQSSY
SIO_010081: J1C59_RS21390
subclass of: SO_0000673
so part of: J1C59_RS21390
location: complement(5835..6368)
location: region:5835-6368:-1
so has part: feature:5835-6368:-1:exon

WP_128085381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5835-6368:-1:exon

J1C59_RS21395
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21395
so part of: sequence
location: complement(6445..6981)
location: region:6445-6981:-1
so has part: feature:6445-6981:-1:exon
subclass of: SO_0000010

position:6445:-1
position: 6445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6981:-1
position: 6981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6445-6981:-1:exon

J1C59_RS21395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21395
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIAAAQRIRGHLTESERNEISFTGIEFVRAGYSVRTALDISCGLLAASVEQLALQVDEREWIWAVDYESGAWQMEDEDDDEICTGSTCFEGIRYQLVPHRSNAVDARVYVPEEVTGNGHFRITELDTGRQVAILPAMNIARHVAGYAVPNYGGYGDVLISETSEKPTHLSASAWLLG
SIO_010081: J1C59_RS21395
subclass of: SO_0000673
so part of: J1C59_RS21395
location: complement(6445..6981)
location: region:6445-6981:-1
so has part: feature:6445-6981:-1:exon

WP_128085382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6445-6981:-1:exon

J1C59_RS21400
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21400
so part of: sequence
location: complement(7302..8435)
location: region:7302-8435:-1
so has part: feature:7302-8435:-1:exon
subclass of: SO_0000010

position:7302:-1
position: 7302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8435:-1
position: 8435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7302-8435:-1:exon

J1C59_RS21400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013036429.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin fold domain-containing protein
translation: MTVLRREGLFVAEITGGLLSARRYVTLDEVKLDKKPFAGMAASAPIFVIPIRETPWFVVHSDGLYAQNAHDALTPLYRGEDAVQLLRCITDLLTTVESKISVRRVLRDYGYGIASAFLAAMLVVGASVAYDAYTSSSTHLLTTVDAHPVFHPEAGAARFTPAEPGSAPKMPAPGMRTVPPAVTSEQSPAVAPADGWSLPLSVRAELPARLSKAASRGLFTVPLSSGHARTIYVFADPACPNCQRMERHIETAAGTVNVVIFPVTIEGREDSLKTLTPVMALPEAERPAAWKRLFAADTGVGVPGSTAVSPAVSDENQAETARGAIGVNEVAFRAYRLPGTPWTISDDGRYVPQSVLSSPAALTDFLNGGDVTRCPYN
SIO_010081: J1C59_RS21400
subclass of: SO_0000673
so part of: J1C59_RS21400
location: complement(7302..8435)
location: region:7302-8435:-1
so has part: feature:7302-8435:-1:exon

WP_128085383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7302-8435:-1:exon

J1C59_RS21405
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21405
so part of: sequence
location: complement(8451..9665)
location: region:8451-9665:-1
so has part: feature:8451-9665:-1:exon
subclass of: SO_0000010

position:8451:-1
position: 8451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9665:-1
position: 9665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8451-9665:-1:exon

J1C59_RS21405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013036428.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein
translation: MQAYNLNATGSNEPAMVMLTCCVVLLVCWLFFADFVRWSCWFLYWMWRFADFPHIHRYAAERINLLAATGNGAESVGLSQWRDVMNLTAGILFVPMVPLVTVTGWALARHPALGFRSRRAIDIHSLPRVMATFAPSVIPVLSGHRGDGLMNDTTPENAWALKPEEFAEQHGLIKRRVLDRDAAATLFDAQTGPSMTTPDQWQPHERALLAVFGLQVFAGDRGTATTLLDDLNRSCMTRRLFRAPEFRSVPDWQVSEKHVARVLASPGVSEWLKAHGTVRSALAGLYGRDLRLPPARFRWLKGCDRTLWYGLHTADTAKVFVEGAGIVAQARAEQMAVRLGLQRPPLMTGEAVDGLQSELESLGLVYPRDVRLKRKKPQRDMPFPDALYLPGEGEDEFSDGADAR
SIO_010081: J1C59_RS21405
subclass of: SO_0000673
so part of: J1C59_RS21405
location: complement(8451..9665)
location: region:8451-9665:-1
so has part: feature:8451-9665:-1:exon

WP_140916802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8451-9665:-1:exon

J1C59_RS21410
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
gene: excA
locus tag: J1C59_RS21410
so part of: sequence
location: complement(9776..10438)
location: region:9776-10438:-1
so has part: feature:9776-10438:-1:exon
subclass of: SO_0000010

position:9776:-1
position: 9776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10438:-1
position: 10438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9776-10438:-1:exon

J1C59_RS21410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
gene: excA
locus tag: J1C59_RS21410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013036427.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid IncI1-type surface exclusion protein ExcA
translation: MKTLQRTETGLDFSWALIKTVYYFIYLPCALITAALTLIVFMGSSSHNLYATDYFLLSLMWISILVPLGYRKFVIADKRQKLLKMVALLTSDARFSPNKQHQVLDAGQGKYLGIDIKSGNILYIHMVKKGLVDVIGLTMCDWKERELEGNTLRINTKNPEVPVLSINAHPTVAKELFSTLGAMSHNSYMEPFPNEPWPLHVGIQSRFVEFEHNVVVPQVI
SIO_010081: J1C59_RS21410
subclass of: SO_0000673
so part of: J1C59_RS21410
location: complement(9776..10438)
location: region:9776-10438:-1
so has part: feature:9776-10438:-1:exon

WP_128086745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9776-10438:-1:exon

J1C59_RS21415
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21415
so part of: sequence
location: complement(10505..12646)
location: region:10505-12646:-1
so has part: feature:10505-12646:-1:exon
subclass of: SO_0000010

position:10505:-1
position: 10505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12646:-1
position: 12646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10505-12646:-1:exon

J1C59_RS21415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013036426.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DotA/TraY family protein
translation: MKLLTKIQAAALLCAASCPAFADSVDYQTISDAASKTGDLSRQALVMIFGDVVLTPFQPGQATLIGSLFALLNGVLCAVALVWFLIVTLKTLFKGGQDGKVFSAGRSMLHPVMSFAGFITLIPTASGWSLSQLVMLWAASTMGVGSANLFTDKAADMISSGMSLVVQPTAPSTRSAARAVFEMNLCKYATNSELSSLYQDGQARTALMQTKGGNGDYTTGNGSALCGSARIPEPSTGVMDSLFGSAVNTAGVTSASRGALDTMQSTLDAAAQAYVASYLSRRDQDSGTLADPETSIQNAAAAYETTVNNALNQLNYKDSLQSQLTTQLKTYGWISLGAWYNTFATANSKTNEVANAAPVTSGSSLHGETGTGDLYHQVFAAYRSQVQNSTYTAPLGTQTAKDDGAASSAVDPDAIFVGLFRSPVQRLTNALATGRVGTEADFSNQVNPLIKMQTIGDYTLWATEGVLTTYTLVYAAASSADNSILGTVGRLMPFMNVTAAAKDVLAQLSPAVYFLLLLLLAVGFSLAVFLPAVPFLYWMVGVFNWLVSVMVGCAAGPMWSATHLGAEEDKGSRSAYGYIFLIDMMLRPSLMVLGFFFASVAVMAGGTLLNLLFGTALANANADSLMGLFKLVGWLLIYARIATFGVTRVFGLQATLADYVITFLGGAGMAGIMGGLVDDVKGMFAATGGGARRTPGLQKVTNPEMPDNKDGVK
SIO_010081: J1C59_RS21415
subclass of: SO_0000673
so part of: J1C59_RS21415
location: complement(10505..12646)
location: region:10505-12646:-1
so has part: feature:10505-12646:-1:exon

WP_128086744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10505-12646:-1:exon

J1C59_RS21420
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21420
so part of: sequence
location: complement(13091..13294)
location: region:13091-13294:-1
so has part: feature:13091-13294:-1:exon
subclass of: SO_0000010

position:13091:-1
position: 13091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13294:-1
position: 13294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13091-13294:-1:exon

J1C59_RS21420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019105438.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hha/YmoA family nucleoid-associated regulatory protein
translation: MTRTDWLYKFRRIHNPDTLEKLYEHLSYTGDPAEEFVMTQAYDHRKAELATGKLFDRVPQHVWHFVK
SIO_010081: J1C59_RS21420
subclass of: SO_0000673
so part of: J1C59_RS21420
location: complement(13091..13294)
location: region:13091-13294:-1
so has part: feature:13091-13294:-1:exon

WP_128086743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13091-13294:-1:exon

J1C59_RS21425
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21425
so part of: sequence
location: complement(13360..13782)
location: region:13360-13782:-1
so has part: feature:13360-13782:-1:exon
subclass of: SO_0000010

position:13360:-1
position: 13360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13782:-1
position: 13782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13360-13782:-1:exon

J1C59_RS21425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013036425.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYIRLDVFAGMLGLRPGDLLHAVRTTGQLDGLPLPARRQVRGAAVMFNQSEAIAFSQRWQARKPEPPAPSSGEPLMSVEAFAEQTGIAPLALWQAATTGKTLKGIPVPVAVKSCNGRLMFEPAAVTQFLQRYQAVPLKQR
SIO_010081: J1C59_RS21425
subclass of: SO_0000673
so part of: J1C59_RS21425
location: complement(13360..13782)
location: region:13360-13782:-1
so has part: feature:13360-13782:-1:exon

WP_128086742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13360-13782:-1:exon

J1C59_RS21430
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
gene: traX
locus tag: J1C59_RS21430
so part of: sequence
location: complement(13947..14519)
location: region:13947-14519:-1
so has part: feature:13947-14519:-1:exon
subclass of: SO_0000010

position:13947:-1
position: 13947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14519:-1
position: 14519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13947-14519:-1:exon

J1C59_RS21430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
gene: traX
locus tag: J1C59_RS21430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013036423.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraX
translation: MKPSESGTPDKGEKKAHITPKRAGWIALNIFLPAWEVSSWTRHAGRNVSRLWQRIREVTAGRGAGDYRPADWSQAVQDSGLTPERLARNLRVSRWIWWGLMWLTGLPVMGFMLMLIAAGSSISGTGWLRVGCVMVVLLLLAVTGFVQALAVSYRLWQLSQRRVSASEGGSFQAYLQETRWCRQVLSGGLF
SIO_010081: J1C59_RS21430
subclass of: SO_0000673
so part of: J1C59_RS21430
location: complement(13947..14519)
location: region:13947-14519:-1
so has part: feature:13947-14519:-1:exon

WP_140916801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13947-14519:-1:exon

J1C59_RS21435
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21435
so part of: sequence
location: complement(14506..15276)
location: region:14506-15276:-1
so has part: feature:14506-15276:-1:exon
subclass of: SO_0000010

position:14506:-1
position: 14506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15276:-1
position: 15276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14506-15276:-1:exon

J1C59_RS21435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013036422.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prepilin peptidase-dependent protein
translation: MTTIESFAPDAGALFSLLDAGAGPVLVNDPCGALWDEFWQAPHCRNVWQSWRLAPGQTQEGDVWDALAALRHVHAADGAAALAAALFPPATHTDLTRRLMACVMTFASDTGHFNGQSSGLGALAGLLWADDLWGAITRWSRQYPYHPALQSARALLTREGASESVLAISSRMTIFHHPHVAETFTGAPGFRLSTLRLRPAQVIFLTPDIRCMESDELTSVYGFLLHALQSMASLHNVKFSLAEPVRAEEGGARETF
SIO_010081: J1C59_RS21435
subclass of: SO_0000673
so part of: J1C59_RS21435
location: complement(14506..15276)
location: region:14506-15276:-1
so has part: feature:14506-15276:-1:exon

WP_140916800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14506-15276:-1:exon

J1C59_RS21440
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
gene: traW
locus tag: J1C59_RS21440
so part of: sequence
location: complement(15293..16021)
location: region:15293-16021:-1
so has part: feature:15293-16021:-1:exon
subclass of: SO_0000010

position:15293:-1
position: 15293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16021:-1
position: 16021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15293-16021:-1:exon

J1C59_RS21440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
gene: traW
locus tag: J1C59_RS21440
inference: COORDINATES: protein motif:HMM:NF033888.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraW
translation: MTTIQTGITTEMRCVAALGDGAFTREQATHVTAAFSNVFIEDDQGSHFRLVVREPSGALIWRSFDFEHDAGYWLRRYINSHGVCQSLRSHLTALTQYKSMQSAAMQPQLDMVAASQPQDATQAALTEARQAPSAESYFQQTASAQAKQTGTMSEREFEAFEVGRRYANTAWVTDLQAMDGDNLAREMARQQSLANWLALGIKNELRQANIISGQQLALAAKNEYAPQLQSLSAQMSAGVSAQ
SIO_010081: J1C59_RS21440
subclass of: SO_0000673
so part of: J1C59_RS21440
location: complement(15293..16021)
location: region:15293-16021:-1
so has part: feature:15293-16021:-1:exon

WP_242281424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15293-16021:-1:exon

J1C59_RS21445
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21445
so part of: sequence
location: 16526..16675
location: region:16526-16675:1
so has part: feature:16526-16675:1:exon
subclass of: SO_0000010

position:16526:1
position: 16526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16675:1
position: 16675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16526-16675:1:exon

J1C59_RS21445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21445
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLLLLLLLLLLLLLLLLLLLLLLLLFKHIFMRRKVRTDWRKKEAEPGR
SIO_010081: J1C59_RS21445
subclass of: SO_0000673
so part of: J1C59_RS21445
location: 16526..16675
location: region:16526-16675:1
so has part: feature:16526-16675:1:exon

WP_162287384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16526-16675:1:exon

J1C59_RS21450
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21450
so part of: sequence
location: complement(16827..17144)
location: region:16827-17144:-1
so has part: feature:16827-17144:-1:exon
subclass of: SO_0000010

position:16827:-1
position: 16827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17144:-1
position: 17144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16827-17144:-1:exon

J1C59_RS21450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012439769.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HigA family addiction module antitoxin
translation: MAMFNPPHPGGLITEYIEDNNIGLRGLAKELGVSAAALSKVASGKASVSPEMAVRLEAGLGIAARLWLSMQAACDLHKARENTDVSGVHLHPGVMTASAQDRPGK
SIO_010081: J1C59_RS21450
subclass of: SO_0000673
so part of: J1C59_RS21450
location: complement(16827..17144)
location: region:16827-17144:-1
so has part: feature:16827-17144:-1:exon

WP_128086828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16827-17144:-1:exon

J1C59_RS21455
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21455
so part of: sequence
location: complement(17144..17425)
location: region:17144-17425:-1
so has part: feature:17144-17425:-1:exon
subclass of: SO_0000010

position:17425:-1
position: 17425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17144-17425:-1:exon

J1C59_RS21455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006122229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MIKSWKHKGLQKLFEKGDISGVQAKDAERIRLRLLVIDEALSTDEFRNYPGFHFHPLKGDRKNLFSITVRANWRITFEFTDGDAYILNLEDYH
SIO_010081: J1C59_RS21455
subclass of: SO_0000673
so part of: J1C59_RS21455
location: complement(17144..17425)
location: region:17144-17425:-1
so has part: feature:17144-17425:-1:exon

WP_128086829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17144-17425:-1:exon

J1C59_RS21460
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21460
so part of: sequence
location: complement(17496..18245)
location: region:17496-18245:-1
so has part: feature:17496-18245:-1:exon
subclass of: SO_0000010

position:17496:-1
position: 17496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18245:-1
position: 18245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17496-18245:-1:exon

J1C59_RS21460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21460
inference: COORDINATES: protein motif:HMM:NF018636.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid SOS inhibition protein A
translation: MIPKSLSLVTLLPERQAALQAIVSVEHARQRGTRLARHPYAAAFMKQLSGRGRVSVQTLNRIRGIYLRPREKRAPLPEWEGALDIFLSTAGEVCPLPLPGELATTLFPEAVFRRAERAKHAADKTINHATRRERQAADYQERQLENRIRQAETELAFRTPETLRGWFAIWCDSVPENDMKNMIAAWARRFPSLKGLETLQPYAGDVVCEVAGEIHLRSLHMDSAQKGMNRWLVPNKLTARNISSQGGKK
SIO_010081: J1C59_RS21460
subclass of: SO_0000673
so part of: J1C59_RS21460
location: complement(17496..18245)
location: region:17496-18245:-1
so has part: feature:17496-18245:-1:exon

WP_128086830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17496-18245:-1:exon

J1C59_RS21465
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21465
so part of: sequence
location: complement(18242..18688)
location: region:18242-18688:-1
so has part: feature:18242-18688:-1:exon
subclass of: SO_0000010

position:18242:-1
position: 18242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18688:-1
position: 18688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18242-18688:-1:exon

J1C59_RS21465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21465
inference: COORDINATES: protein motif:HMM:NF018044.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugation system SOS inhibitor PsiB family protein
translation: MTQEEKFTLNTLQAFTACDFEAYRDRGETFRQRLTGAVLNALQLPDCWRTDCEMRGEWGGAYPVHLRLTRTDAAGLAIELVSPSATSPLWSMVLNDIRTRSSVRLCVSYGFEPAVMSATLKKITEYTRAGFTGAGEMVTALLMGGHAA
SIO_010081: J1C59_RS21465
subclass of: SO_0000673
so part of: J1C59_RS21465
location: complement(18242..18688)
location: region:18242-18688:-1
so has part: feature:18242-18688:-1:exon

WP_128086831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18242-18688:-1:exon

J1C59_RS21470
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
gene: radC
locus tag: J1C59_RS21470
so part of: sequence
location: complement(18785..19303)
location: region:18785-19303:-1
so has part: feature:18785-19303:-1:exon
subclass of: SO_0000010

position:18785:-1
position: 18785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19303:-1
position: 19303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18785-19303:-1:exon

J1C59_RS21470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
gene: radC
locus tag: J1C59_RS21470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011051388.1
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RadC
translation: MESVSDNVRFFTRLQIRDAQGNYVMATESQILEEAARAIDHRYPTGTFFAAPDVSEAFFSAKLAWREREIFAVAFLNNQHQLLAYEELFQGSVSSVEIHPREVVYRALQLNASAVIVSHNHPSFKNEPSRADITITGRLQKALELVAVRLIDHIIVAGNETVSLAERGQLNG
SIO_010081: J1C59_RS21470
subclass of: SO_0000673
so part of: J1C59_RS21470
location: complement(18785..19303)
location: region:18785-19303:-1
so has part: feature:18785-19303:-1:exon

WP_242281429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18785-19303:-1:exon

J1C59_RS21475
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21475
so part of: sequence
location: complement(20201..20596)
location: region:20201-20596:-1
so has part: feature:20201-20596:-1:exon
subclass of: SO_0000010

position:20201:-1
position: 20201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20596:-1
position: 20596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20201-20596:-1:exon

J1C59_RS21475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013036372.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1380 family protein
translation: MYGTVSQLCNDLKIQFEGDRKITLIIWRKEDVIRVMGEEHVTAETAAEIVCDLATWDRDAQHEAGVGAETLRVLADNTRYAAGQLSRPVTLSAGDLEILMQAAGRLPDAGSGRQTDAIQAALRRAYLAINQ
SIO_010081: J1C59_RS21475
subclass of: SO_0000673
so part of: J1C59_RS21475
location: complement(20201..20596)
location: region:20201-20596:-1
so has part: feature:20201-20596:-1:exon

WP_128086795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20201-20596:-1:exon

J1C59_RS21480
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21480
so part of: sequence
location: complement(20649..21071)
location: region:20649-21071:-1
so has part: feature:20649-21071:-1:exon
subclass of: SO_0000010

position:20649:-1
position: 20649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21071:-1
position: 21071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20649-21071:-1:exon

J1C59_RS21480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016495620.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1380 family protein
translation: MYGTVNELCARLLQRFKSDELMTLIIWTKEDVLAVLDDESVTEETAAEIVQQICGLDAQHDYGVSLETLQAVLENIRKEEKQARVATVPAAALESALKVAWDFMRLEDAQNGEGASARRFPAETAALFRISALLREQSGE
SIO_010081: J1C59_RS21480
subclass of: SO_0000673
so part of: J1C59_RS21480
location: complement(20649..21071)
location: region:20649-21071:-1
so has part: feature:20649-21071:-1:exon

WP_128086796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20649-21071:-1:exon

J1C59_RS21485
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21485
so part of: sequence
location: complement(21117..21554)
location: region:21117-21554:-1
so has part: feature:21117-21554:-1:exon
subclass of: SO_0000010

position:21117:-1
position: 21117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21554:-1
position: 21554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21117-21554:-1:exon

J1C59_RS21485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019105022.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antirestriction protein
translation: MNTQPHVLQPASVLADFVSLRFLPSLFGHDYAQAENNVYLYASRYLANYDGTVWDFVQLPGGGGYMKPEGEERYMYSNPYHWTELEISADAAGIIITALVLNHRSWLYDRHDDEELSAHFCQRHRQLMECVKGHPEAAAIFCALN
SIO_010081: J1C59_RS21485
subclass of: SO_0000673
so part of: J1C59_RS21485
location: complement(21117..21554)
location: region:21117-21554:-1
so has part: feature:21117-21554:-1:exon

WP_128086797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21117-21554:-1:exon

J1C59_RS21490
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21490
so part of: sequence
location: complement(22018..22248)
location: region:22018-22248:-1
so has part: feature:22018-22248:-1:exon
subclass of: SO_0000010

position:22018:-1
position: 22018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22248:-1
position: 22248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22018-22248:-1:exon

J1C59_RS21490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019104971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDQTLTTDNTQLTDDINDLEESLYEFHLRLRDMTKRHLFRGAAPAQKMAGMLIEQIDTELVALYRRAAEMRSHLK
SIO_010081: J1C59_RS21490
subclass of: SO_0000673
so part of: J1C59_RS21490
location: complement(22018..22248)
location: region:22018-22248:-1
so has part: feature:22018-22248:-1:exon

WP_128086798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22018-22248:-1:exon

J1C59_RS21495
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21495
so part of: sequence
location: complement(22282..22935)
location: region:22282-22935:-1
so has part: feature:22282-22935:-1:exon
subclass of: SO_0000010

position:22282:-1
position: 22282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22935:-1
position: 22935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22282-22935:-1:exon

J1C59_RS21495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006322813.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA methyltransferase
translation: MSRFMRGDSVEIMAGFPDNSIDFILTDPPYLVGFKDRSGRSIANDVSDEWVLPASREMFRVLKKDSLAVSFYGWNRVDIFMQAWKAAGFRVVGHLVFTKTYASKSAFVGYQHESAYLLAKGRPPLPAKPLPDVMPWQYTGNRHHPTEKPVSVLQPLIETFTKPGDLVLDPFAGSGSTCVAADQCGRRWIGIELLEQYHTAGLRRLGELRAARSARAA
SIO_010081: J1C59_RS21495
subclass of: SO_0000673
so part of: J1C59_RS21495
location: complement(22282..22935)
location: region:22282-22935:-1
so has part: feature:22282-22935:-1:exon

WP_128086799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22282-22935:-1:exon

J1C59_RS21500
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21500
so part of: sequence
location: complement(23263..23601)
location: region:23263-23601:-1
so has part: feature:23263-23601:-1:exon
subclass of: SO_0000010

position:23263:-1
position: 23263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23601:-1
position: 23601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23263-23601:-1:exon

J1C59_RS21500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019105477.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIWLVSYQEETGSTSHEYHMLLSGQDFRLAEAACERMGENWWTPERPDCSQGCYWQFDRGSVWLKSIVLLDEREAETLAGLRFLDEWRVSGSPDAPVICDRSDCRWEDYRP
SIO_010081: J1C59_RS21500
subclass of: SO_0000673
so part of: J1C59_RS21500
location: complement(23263..23601)
location: region:23263-23601:-1
so has part: feature:23263-23601:-1:exon

WP_128086801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23263-23601:-1:exon

J1C59_RS21505
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21505
so part of: sequence
location: complement(23598..23843)
location: region:23598-23843:-1
so has part: feature:23598-23843:-1:exon
subclass of: SO_0000010

position:23598:-1
position: 23598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23843:-1
position: 23843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23598-23843:-1:exon

J1C59_RS21505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013512851.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRELTLAGLMASLSGFAPDTPCVAHIWMADDFEDIDPELTPGEVTTAIELADRTLDADISLSWGFMRDCAESMKARRETE
SIO_010081: J1C59_RS21505
subclass of: SO_0000673
so part of: J1C59_RS21505
location: complement(23598..23843)
location: region:23598-23843:-1
so has part: feature:23598-23843:-1:exon

WP_242281425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23598-23843:-1:exon

J1C59_RS21510
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21510
pseudo: true
so part of: sequence
location: complement(23880..24808)
location: region:23880-24808:-1
so has part: feature:23880-24808:-1:exon
subclass of: SO_0000010

position:23880:-1
position: 23880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24808:-1
position: 24808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23880-24808:-1:exon

J1C59_RS21510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010260374.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF1281 domain-containing protein
SIO_010081: J1C59_RS21510
subclass of: SO_0000673
so part of: J1C59_RS21510
location: complement(23880..24808)
location: region:23880-24808:-1
so has part: feature:23880-24808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23880-24808:-1:exon

J1C59_RS21515
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21515
so part of: sequence
location: complement(25169..25612)
location: region:25169-25612:-1
so has part: feature:25169-25612:-1:exon
subclass of: SO_0000010

position:25169:-1
position: 25169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25612:-1
position: 25612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25169-25612:-1:exon

J1C59_RS21515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004171349.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SemiSWEET family transporter
translation: MKNILLVVLTIIAALLSAFLLSPWPVWLGTLAAWVTTGSFCLQVLHIIKNKDTSGLSLGMWGALFFGVSCWAWYGFRMSDIPVMTANGITALLALTVILLKLWHERPVFNKNSRRLVRMPRVILKPRIRRLRPLKTPDESRLKRENK
SIO_010081: J1C59_RS21515
subclass of: SO_0000673
so part of: J1C59_RS21515
location: complement(25169..25612)
location: region:25169-25612:-1
so has part: feature:25169-25612:-1:exon

WP_128086646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25169-25612:-1:exon

J1C59_RS21520
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21520
so part of: sequence
location: complement(25609..27012)
location: region:25609-27012:-1
so has part: feature:25609-27012:-1:exon
subclass of: SO_0000010

position:25609:-1
position: 25609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27012:-1
position: 27012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25609-27012:-1:exon

J1C59_RS21520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21520
EC number: 1.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004161085.1
GO function: GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mannitol dehydrogenase family protein
translation: MSKTDYKKLTWLHLGAGAFHRAHQAWYLNQLHLKGDTRWTIALANIRNSQTQETLQRLSAQKGRYTLELISPAGERRYQTISSVSKIILWNPGMRSLIEEGAHPDTRIISFTVTEGGYFLNDDCHLDLQHPAVIADLAGNSDPLTLYGALIRILRQRLESSAGPVTLLSCDNLRNNGDSILTGLTEFVQASDDICLLKWTKSNVSAPNSMVDRITPKFDEKIFSRLAEHGIDGDQVPLSCESFAQWVVQDRFIAGRPALEEVGVEFKDNVMHYEEKKIRILNASHSGVAWAGALMGKDYIDESLTPQVVQWIRDYVMHDVKKTLELNDADLREYCDITLSRFSNRWVRDTTQRVSSDSIAKLHQYILPVIRAVYAQGARPHATMILSALWMRFMQRQQKETLLFEYEDRALEEVDFRAIFCAEDPLLAFTESKKIWGGLSGHPELYKDMLLALKCVDRGLEEAGVIA
SIO_010081: J1C59_RS21520
subclass of: SO_0000673
so part of: J1C59_RS21520
location: complement(25609..27012)
location: region:25609-27012:-1
so has part: feature:25609-27012:-1:exon

WP_242281426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25609-27012:-1:exon

J1C59_RS21525
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21525
so part of: sequence
location: complement(27478..28911)
location: region:27478-28911:-1
so has part: feature:27478-28911:-1:exon
subclass of: SO_0000010

position:27478:-1
position: 27478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28911:-1
position: 28911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27478-28911:-1:exon

J1C59_RS21525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21525
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005228626.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 32 protein
translation: MTYSIANAEHEIQAKCNTLNLRWYPRYHLAARAGWMNDPNGLVWFDGWYHAFYQHHPYSNQWGPMHWGHARSKDLVHWEHLPVAIAPEGPEDRDGCFSGSAVVNGDILALIYTGHKYHGETANEDELFQVQCLATSRDGIHFERQGIIVDTPPGVHHFRDPKVWREGDYWYLVVGARMGDTGEVRLYCSEDLHQWHEEGVLDKAESGMGFMWECPDLFTLNDKRVLMFSPQGLAAAGFRNRNLFQSGYIIGDWQPGLPFIRTSEFAEMDYGHDFYAPQSFLTPDGRRIVIGWLDMWESPLPEQQDGWAGMLSLPRELSLSDDNRLQMCPVKEMESLRQNWFSWPARALKNEQISVLDEAESVEVILNWKGALSTAEQYGISLGKGLRVYMDIQMQRLVLERYYPQYALCGVRSVTINPDNDLSLRLYIDRSSVEVFINNGEACLSSRIYPDAGDRELRLFAWNGSALLSESGAWQLE
SIO_010081: J1C59_RS21525
subclass of: SO_0000673
so part of: J1C59_RS21525
location: complement(27478..28911)
location: region:27478-28911:-1
so has part: feature:27478-28911:-1:exon

WP_128086647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27478-28911:-1:exon

J1C59_RS21530
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21530
so part of: sequence
location: complement(28930..30168)
location: region:28930-30168:-1
so has part: feature:28930-30168:-1:exon
subclass of: SO_0000010

position:28930:-1
position: 28930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30168:-1
position: 30168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28930-30168:-1:exon

J1C59_RS21530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004105313.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MKVHRYYSYPLLSALLFFFFITWSSCGSLLSIWLHQEVGLKAGETGFIFAVLSASALFAQVCYGFIQDKLGLRKHLLWYLTAMLILSGPAYLLFGYLLKINILLGSLFGGIFIGLTFNGGIGVLESYTERVARQSQFEFGKARMWGSLGWALATFFTGLLFNIDPKLNFAVASISGLIFMLLLARLHVSSATHAMQEAVAGGKVTLQDALRLLILPRFWALVFFVVGICIYGVYDQQFPVYFSSQFATPQEGNMMYGYLNAFQVFLEAAGMFCAPWLVNRIGAKSGLIFAGMVMAMRMVASGLVEGPLLISVTKLLHAVELPVLLVAIFKYNSLNFDKRLSSTLYLVGFACTSSLIASILSPLAGYSYEKYGFAESYLFMGILVFGISFISIFLLRSSNASADSQIPQLSTI
SIO_010081: J1C59_RS21530
subclass of: SO_0000673
so part of: J1C59_RS21530
location: complement(28930..30168)
location: region:28930-30168:-1
so has part: feature:28930-30168:-1:exon

WP_162287382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28930-30168:-1:exon

J1C59_RS21535
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21535
so part of: sequence
location: 30414..31409
location: region:30414-31409:1
so has part: feature:30414-31409:1:exon
subclass of: SO_0000010

position:30414:1
position: 30414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31409:1
position: 31409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30414-31409:1:exon

J1C59_RS21535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004853905.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LacI family DNA-binding transcriptional regulator
translation: MTSLKDVANLANVSIMTVSRALNSPEQLRPETLARVQAAIAKINYVPDFYAKKIRGAHTSPRTIGVLALDTVTTPFSVEITLSIEETARAHGWNSYVVNMFSKDSPETMVDLLLSHRPDGIIYTTMGLRQVPIPVKLLTLPCVLANCESHDESVASYIPDDEQGQYTAVKAMLAAGYKRPLCMHLPEKHLATSRRHQGLERACIEAGVDPGMFKYIYMEAGDEHYRDIPAQLLKHIRQGKPWFDAVICGNDRIAFMVYQTLLTEGLRIPHDVAVIGYDNMVSIGDLFIPPLSTVQLPHYEIGRLSALHIINQQTHKNTIKVESPLLLRESI
SIO_010081: J1C59_RS21535
subclass of: SO_0000673
so part of: J1C59_RS21535
location: 30414..31409
location: region:30414-31409:1
so has part: feature:30414-31409:1:exon

WP_128086649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30414-31409:1:exon

J1C59_RS21540
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21540
so part of: sequence
location: complement(32009..32323)
location: region:32009-32323:-1
so has part: feature:32009-32323:-1:exon
subclass of: SO_0000010

position:32009:-1
position: 32009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32323:-1
position: 32323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32009-32323:-1:exon

J1C59_RS21540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21540
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: LuxR C-terminal-related transcriptional regulator
translation: MQSEWSLPERAEQSTMQVINAAGTEIRLKSQEVCIIWFLMTGMKPRDISLLMQTTEQNVSYYKRTAMKKLQVKTNFEMFSWFRGNRSVFKSEKAESFILKRSLF
SIO_010081: J1C59_RS21540
subclass of: SO_0000673
so part of: J1C59_RS21540
location: complement(32009..32323)
location: region:32009-32323:-1
so has part: feature:32009-32323:-1:exon

WP_158086893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32009-32323:-1:exon

J1C59_RS21545
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21545
so part of: sequence
location: 32644..33681
location: region:32644-33681:1
so has part: feature:32644-33681:1:exon
subclass of: SO_0000010

position:32644:1
position: 32644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33681:1
position: 33681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32644-33681:1:exon

J1C59_RS21545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21545
inference: COORDINATES: protein motif:HMM:NF012698.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix-turn-helix domain-containing protein
translation: MKRIYIIGDNVKFILSEKCLVRLDSDTKVKLRAPGAFCLLLLIENHGKLVTHDDLYKFGWERFGMTASLNVLHNTIFYLRKMLNQAGDFDNGIIETIHRRGFIFNLQVSVALTYINMDTPEEEETMQAEEQDQDSDDAEGFLFPAESERAEEQNSDAPRAMAGQANPPETRPALRQAGETESVKAKSEMKSSSETFSSPGLIQPEGVAIIYSASVRTSDTLCGPAVKKRAVTIAWPRYILLLSILLIIACSLILYPAVSPGNYVNTGKLGACEVYQNNRAYDFKNLKMVDYLSRFCKDPRVLYLTNYPYGNKVSAINCREKIALFSDDICYSNYFIYKDTGYYHD
SIO_010081: J1C59_RS21545
subclass of: SO_0000673
so part of: J1C59_RS21545
location: 32644..33681
location: region:32644-33681:1
so has part: feature:32644-33681:1:exon

WP_242281427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32644-33681:1:exon

J1C59_RS21550
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21550
so part of: sequence
location: 33674..34144
location: region:33674-34144:1
so has part: feature:33674-34144:1:exon
subclass of: SO_0000010

position:33674:1
position: 33674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34144:1
position: 34144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33674-34144:1:exon

J1C59_RS21550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21550
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKRIFFLSTVGLAVALTSFTIWYRYGITSGFSCSGNINFHRESGIMRLSTKLNIDENSGTLSMNGFVTREDGTRENVNRTVVFTSHHVGSRYTWVSGQILASIDDKLSPEMASVWFPEFYREPKSKVELFISRLNINSVMLSGEFVPYYVCTQRH
SIO_010081: J1C59_RS21550
subclass of: SO_0000673
so part of: J1C59_RS21550
location: 33674..34144
location: region:33674-34144:1
so has part: feature:33674-34144:1:exon

WP_140916936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33674-34144:1:exon

J1C59_RS21555
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21555
so part of: sequence
location: 34687..35433
location: region:34687-35433:1
so has part: feature:34687-35433:1:exon
subclass of: SO_0000010

position:34687:1
position: 34687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35433:1
position: 35433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34687-35433:1:exon

J1C59_RS21555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008460566.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fimbrial protein
translation: MKIWPFTSTTQFLTAICASFFFQTTHAAMYVYPMETAVGENGSSQIRVISQDNDVQFVKIKLKKILNPATDKEHEVDFDMSDASQLIITPQKLALAAGGERLVRIVSVNLPQKETTWRVYFEGVNEITYNLSPGESKSAAGDAQVGVNIIWGVLVHVAPQKEVARMEYSPASGKVTNSGTIRIPVKEFGTCSSASDCKWEKKEITLYPDSIVSIPGIKFLPGKTYKIKYFNWIKNTTEVMELPASLVR
SIO_010081: J1C59_RS21555
subclass of: SO_0000673
so part of: J1C59_RS21555
location: 34687..35433
location: region:34687-35433:1
so has part: feature:34687-35433:1:exon

WP_128086849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34687-35433:1:exon

J1C59_RS21560
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21560
so part of: sequence
location: 35482..35988
location: region:35482-35988:1
so has part: feature:35482-35988:1:exon
subclass of: SO_0000010

position:35482:1
position: 35482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35988:1
position: 35988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35482-35988:1:exon

J1C59_RS21560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008107322.1
GO component: GO:0009289 - pilus [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CS1 type fimbrial major subunit
translation: MKNNLKTVIGAAALMAAFSASAVQRDITVTADIDSTVDVTLADGSALPASVAMQYLPGKGLDSHKQNIKFWSNAVNKDLNVSLASSPSLTDGNGGNAIPLSVSVNGTALTTTAAVLTYASLFPTGITNGSAIVPLVISQANQQAAITSGKYSGVVSLVVTQATGTPSQ
SIO_010081: J1C59_RS21560
subclass of: SO_0000673
so part of: J1C59_RS21560
location: 35482..35988
location: region:35482-35988:1
so has part: feature:35482-35988:1:exon

WP_128086848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35482-35988:1:exon

J1C59_RS21565
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21565
so part of: sequence
location: 36418..38766
location: region:36418-38766:1
so has part: feature:36418-38766:1:exon
subclass of: SO_0000010

position:36418:1
position: 36418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38766:1
position: 38766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36418-38766:1:exon

J1C59_RS21565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015376531.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TcfC E-set like domain-containing protein
translation: MAIIYDENNARAGLFLGPQYRPKKDAQDIYYDASADSSNALVHQQNVNFVADRNYQSASVQGNGSLGVTQNGYLNIDWNWHGQRARSSSVQEAEVSNAYFRQDLWKRVYVQGGMMDARDIFSNAGGNINLSQLPLGKIRGARLGSTLSWVNMDKVSRGTPVNVFLSQDSRVDAYRDGQLLSSFYLKAGAQELDTRTFPAGSYVVSLRIYENSQLVRTETVPYTGTGSAQPSSFQWFIQGGNISDDGGVRQRSDDDSRRVVQGGLRLPVTANASLTAGAALLRDARYWEGAADWAHGFSSGPLDGMMTTRASYLYGSDGSRGNIQQLNYNDGFSLSFYRSSMTAPDCDNQAEHRYSYSGCYKSTNVMLSVPFSQWYGTLGYALSSNEGRYVYRRDLPDDDKNAQAGVPWEQVYQTRSRSRTWQTGVTRQFRWSSVNVSSSVNAFMRKDSGYDGTDKGAFLTFSLSRASGGTARSRSTASAGASWQTSQRGGDRLGYNAAYSHYADDTGENELGASLYGVNSDTVNASAYGRAGGQYGSGALTVSDAWQKTGNAHTLSSSGNYSSSLVIDRKGLFWGRWGDGNPSSAVTVGVEQDDEQKDSRVSVSLDSGGRSDISGNSRALFTVPGYRETTFTIAESASSPAGTSSEISKGAGSRTLFMTPGRVFNRDIVVSTRYTWLGQMTDAQHRPLEGGIPLNVMSWTPLGGGGFTLETNRQLKMLYVMKDQAFWQCSMKVRAVRDVVRYVGATACESTDMANLPGAEQKQVELMTAGNVRDARPTAMNE
SIO_010081: J1C59_RS21565
subclass of: SO_0000673
so part of: J1C59_RS21565
location: 36418..38766
location: region:36418-38766:1
so has part: feature:36418-38766:1:exon

WP_242281428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36418-38766:1:exon

J1C59_RS21570
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21570
so part of: sequence
location: 38776..39924
location: region:38776-39924:1
so has part: feature:38776-39924:1:exon
subclass of: SO_0000010

position:38776:1
position: 38776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39924:1
position: 39924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38776-39924:1:exon

J1C59_RS21570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21570
inference: COORDINATES: protein motif:HMM:NF019078.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CfaE/CblD family pilus tip adhesin
translation: MKLFCYLGLIMGALVSSVAPCYAVYEAPMARNTTLTAKYDRMSVPSSLTIWDNLSGGRDDTDGQKWARNTLVCKSSSDSTYGACNRTAPAWWQNGSPSDANITLKFTLEGSSTSINLNITGRHDFRAITPASCAVIVNYPASSATGCDGLLEATNLFTYTISQGELAKLTTPGVWRATLKQDLYQWASTYLYTWTASIVLTVTDLNNQQIYFPAFPYSAPRVDLNLNNRPGTSKNATASGTASLDMCLYDGSNSSSNRVNMLFSDEGASATGRAAGLFSVYRTGADKTQAANRIDYQVSVINPTTGVAQEIKNATEISWSNTNQRNIQRQVVLPGVPGVSLCVPAPIQLITPAFNLADKAAGYYTGKLTIIYTPSTQSNVAN
SIO_010081: J1C59_RS21570
subclass of: SO_0000673
so part of: J1C59_RS21570
location: 38776..39924
location: region:38776-39924:1
so has part: feature:38776-39924:1:exon

WP_140916887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38776-39924:1:exon

J1C59_RS21575
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21575
pseudo: true
so part of: sequence
location: complement(<40000..>40089)
location: region:40000-40089:-1
so has part: feature:40000-40089:-1:exon
subclass of: SO_0000010

position:40000:-1
position: 40000
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:40089:-1
position: 40089
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40000-40089:-1:exon

J1C59_RS21575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001424685.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: J1C59_RS21575
subclass of: SO_0000673
so part of: J1C59_RS21575
location: complement(<40000..>40089)
location: region:40000-40089:-1
so has part: feature:40000-40089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40000-40089:-1:exon

J1C59_RS21580
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21580
so part of: sequence
location: 40564..40818
location: region:40564-40818:1
so has part: feature:40564-40818:1:exon
subclass of: SO_0000010

position:40564:1
position: 40564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40818:1
position: 40818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40564-40818:1:exon

J1C59_RS21580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000148350.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MTGWQLKLWRRSLLWKRERAATELGVSLRTYKDYENADTVKHSIALATVTLSLINVLPSMQSQEISSDSMVRLIKKMISTVEEK
SIO_010081: J1C59_RS21580
subclass of: SO_0000673
so part of: J1C59_RS21580
location: 40564..40818
location: region:40564-40818:1
so has part: feature:40564-40818:1:exon

WP_128085880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40564-40818:1:exon

J1C59_RS21585
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
gene: umuD
locus tag: J1C59_RS21585
so part of: sequence
location: 41000..41449
location: region:41000-41449:1
so has part: feature:41000-41449:1:exon
subclass of: SO_0000010

position:41000:1
position: 41000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41449:1
position: 41449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41000-41449:1:exon

J1C59_RS21585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
gene: umuD
locus tag: J1C59_RS21585
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010260379.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translesion error-prone DNA polymerase V autoproteolytic subunit
translation: MKPAIYAEGLTVLWPALFTPPVKIPLYGEYCPAGFPSPAQDYVEKELDLNELCIRRRASTFFVRASGNSMQDLGLCDGDVMVVDRAEQASHGDIVIAEVNGEFTVKRLQLRPRLALLPMNPAYAVIYPEDLQLLGVVTWFFSSTRARGR
SIO_010081: J1C59_RS21585
subclass of: SO_0000673
so part of: J1C59_RS21585
location: 41000..41449
location: region:41000-41449:1
so has part: feature:41000-41449:1:exon

WP_128085881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41000-41449:1:exon

J1C59_RS21590
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21590
pseudo: true
so part of: sequence
location: 41459..>41686
location: region:41459-41686:1
so has part: feature:41459-41686:1:exon
subclass of: SO_0000010

position:41459:1
position: 41459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41686:1
position: 41686
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41459-41686:1:exon

J1C59_RS21590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000457546.1
note: binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA polymerase V subunit UmuC
SIO_010081: J1C59_RS21590
subclass of: SO_0000673
so part of: J1C59_RS21590
location: 41459..>41686
location: region:41459-41686:1
so has part: feature:41459-41686:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41459-41686:1:exon

J1C59_RS21595
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21595
so part of: sequence
location: 41760..42743
location: region:41760-42743:1
so has part: feature:41760-42743:1:exon
subclass of: SO_0000010

position:41760:1
position: 41760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42743:1
position: 42743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41760-42743:1:exon

J1C59_RS21595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010260799.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MLIPPAEHVLLLAERWLKLLSDLGRAQATLTAYRSALRHYLLFCSQHRIEPEKARFEDLAAYISPQLPGMPFPVASATLQLRLSAIRLWYDFLMYQDLCLINPLPRSGTPGMLSSGRGLVPRIVKLPRIPDDAQWQSFLFHAAASPLRDRLMLALTYYGALRRSEITSLSIEDLDFAHRLIRIRAETTKSRRERIVCYSPAVASVLAAHLMQMKREGIYRGALFRSASDRNQAAPLSFWSWSKTVRKWGLESGMPDISTHTFRHLRLTHLARAGWKLHELATYAGHRDLSTTQIYIHLSGRDLAARMAGAIETADIRMANLIFSPEK
SIO_010081: J1C59_RS21595
subclass of: SO_0000673
so part of: J1C59_RS21595
location: 41760..42743
location: region:41760-42743:1
so has part: feature:41760-42743:1:exon

WP_128085883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41760-42743:1:exon

J1C59_RS21600
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21600
so part of: sequence
location: 42745..44862
location: region:42745-44862:1
so has part: feature:42745-44862:1:exon
subclass of: SO_0000010

position:42745:1
position: 42745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44862:1
position: 44862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42745-44862:1:exon

J1C59_RS21600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017802650.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MSPHSPTESSWRPLDMTAYLLKTSLTSGEQTALASSHSRSRMLRMKPAPDLIRPLTDIVAGSGCGSKITALVIAGLLREMHSSGMPCWRWSQDRWQTLCREVREGRPLMAAFAWHLAGFHHPLSLPDIRKPALYASAIFGQAFYHQELQRLTDTLTSLGYAPASQKNHVSGILATLMIMNRDPQLETFTPELLWRVQTGTDKGISRYVGRVSHALAALGIFSSPIRMRNYTKWYEKPVEGIDPAWVHWCRRWRETSVLRPHPREGLYSFILRCGLWLAGAHPKVREPADWTMETCASFIAAVGRMNVDDLQLGTERGTRKSVRSGEPMMPHSRAHFIYSLRRFMNDYESWGWGRLRFSPARHLSTPDTPLFRRGVNPRVIDDPVWLKLIWASLNLRQEDLLTEIHYPLAMLQAMAVFWTHAGLRKNELLRLTTGCITPQADEIVKDDGSVIPAGTLCYLHIPAGKTSKAYVKPVAAVVKKYVDIWLAERPTEQAMLSDERTGEKVRLLFQYRGKPAGSAIMNRTLIQMLCARAGVPIEDSGGTITSHRGRASAVTALASVPQGMSLYELMQWTGHSTPQSTMHYLRIRPTQLAASFVKADRVAHMISVLIDHDPEAASLTGPTMYYDLGDSYCTNPFWSSCQHRMACIGCDFNLLKQSARGMVLESKASVRRYLEEVPLTPDEKAIVEQDAEKIEQALKKSPLKP
SIO_010081: J1C59_RS21600
subclass of: SO_0000673
so part of: J1C59_RS21600
location: 42745..44862
location: region:42745-44862:1
so has part: feature:42745-44862:1:exon

WP_128085884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42745-44862:1:exon

J1C59_RS21605
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21605
so part of: sequence
location: 45179..45493
location: region:45179-45493:1
so has part: feature:45179-45493:1:exon
subclass of: SO_0000010

position:45179:1
position: 45179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45493:1
position: 45493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45179-45493:1:exon

J1C59_RS21605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21605
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVNAAVGNCAQKIRQIAGVYQSGGNLMDAKRSVDLALSELGYLNRTQPELQIINWEQLRLSLQAYLNCCSDIRWLTVIKYARAKAGSRRAGAVNNLKKKVVQS
SIO_010081: J1C59_RS21605
subclass of: SO_0000673
so part of: J1C59_RS21605
location: 45179..45493
location: region:45179-45493:1
so has part: feature:45179-45493:1:exon

WP_128085885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45179-45493:1:exon

J1C59_RS21610
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21610
so part of: sequence
location: 45840..46064
location: region:45840-46064:1
so has part: feature:45840-46064:1:exon
subclass of: SO_0000010

position:45840:1
position: 45840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46064:1
position: 46064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45840-46064:1:exon

J1C59_RS21610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013511994.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KTSC domain-containing protein
translation: MKRHDLNTTLFSSAGFDPTSGVLELEYRNGSCRRWLAVPARVYQAFCAAADPDTFFRSSIDGRYLSVRGQSGPL
SIO_010081: J1C59_RS21610
subclass of: SO_0000673
so part of: J1C59_RS21610
location: 45840..46064
location: region:45840-46064:1
so has part: feature:45840-46064:1:exon

WP_128085886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45840-46064:1:exon

J1C59_RS21615
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21615
so part of: sequence
location: 46083..46706
location: region:46083-46706:1
so has part: feature:46083-46706:1:exon
subclass of: SO_0000010

position:46083:1
position: 46083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46706:1
position: 46706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46083-46706:1:exon

J1C59_RS21615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013511995.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2913 family protein
translation: MKPGNTSVGHLAWCGLIALHMARQDGQAGTPAQETLFLTRWLAVAEKQRRFSKELAPEIRWLLREGREKGIRADLSGKLEYLWLTGSDALLTQNDLSRLQHALQALQMVGWVYRLLNEGQWQGRKALRLNPSVSGLYLHKDSLHAGFNPAGLQTAPLPARITGDLSALDSLLQRSGWRREPAGSDLLLYYLMTQTVQHEDIIRRLTP
SIO_010081: J1C59_RS21615
subclass of: SO_0000673
so part of: J1C59_RS21615
location: 46083..46706
location: region:46083-46706:1
so has part: feature:46083-46706:1:exon

WP_128085887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46083-46706:1:exon

J1C59_RS21620
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21620
so part of: sequence
location: 47087..47329
location: region:47087-47329:1
so has part: feature:47087-47329:1:exon
subclass of: SO_0000010

position:47087:1
position: 47087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47329:1
position: 47329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47087-47329:1:exon

J1C59_RS21620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013199858.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDDADLAHEVQEALIASALSARKPGLKSPDGRCIWCRDEAAVAGTAFCSAECGEDYFRNEHQMKQRYVPSKYPSDNPGNK
SIO_010081: J1C59_RS21620
subclass of: SO_0000673
so part of: J1C59_RS21620
location: 47087..47329
location: region:47087-47329:1
so has part: feature:47087-47329:1:exon

WP_128085888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47087-47329:1:exon

J1C59_RS21625
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21625
so part of: sequence
location: 48114..50051
location: region:48114-50051:1
so has part: feature:48114-50051:1:exon
subclass of: SO_0000010

position:48114:1
position: 48114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50051:1
position: 50051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48114-50051:1:exon

J1C59_RS21625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015701125.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MNKILNNISLTAKFAILGLFSLVLFSVPTMLFVSEGNKYIHDKQREVTGVPVENKILALLNLIQRHRAETALAIATKNPATPSRVQVRDEIENITDVITKDMAKTEGSAAIISKINDVRTQWSQLQQRIDSSQLTLTASLDAHALLIRNLLNANRDVLDFYGLSLDSDINTYRLITSNFSSLPELTESLGKIRALGTSLLARNESISEADSVRMESLISNGSYNLNLFVQDSEKLFLSDNTLKQKFSADADAAVQEANSALKTAEAIFINRSMTNQNPKDYAALFTHAINKFSDYAIGGGNELSEILNAQIKEHRYAQYALLTVLVFIVLLAVIFALVIIRSVTRPVSAASKLALEVAGGDLTSTFTVTGRNETAGLLKALLQMSQRLTLTVENIKSNAVTIATSSEEIARGNGDLSARTEQQAASLAETAASMEQLSSIIGNNADNTRHAAEMANSATSAALRGGKAMESVLASMEKISNSAGQIKEIISVIDGIAFQTNILALNAAVEAARAGEHGKGFAVVASEVRALAQRSAGAAKEIKGLIEQSVEHAEQGISMALDAGEKVKQSVEAIEQTSQLVREISSSSEEQSAGISQINIAVTQMDQVTQQNAVLVEESASSADELASRAASLRDAVSVFRTNAV
SIO_010081: J1C59_RS21625
subclass of: SO_0000673
so part of: J1C59_RS21625
location: 48114..50051
location: region:48114-50051:1
so has part: feature:48114-50051:1:exon

WP_140916875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48114-50051:1:exon

J1C59_RS21630
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21630
so part of: sequence
location: complement(50673..51647)
location: region:50673-51647:-1
so has part: feature:50673-51647:-1:exon
subclass of: SO_0000010

position:50673:-1
position: 50673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51647:-1
position: 51647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50673-51647:-1:exon

J1C59_RS21630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009092786.1
GO function: GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MHQELRALDMNLLLVFDAVYRHRRINMAAEELATSPSALSHALSRLRTTLNDELFIRQGNAMQPTARAHVIAPGLSAALNAMSESLRSANIFLPENSNQTFRFAVTDYTAAVFFPALVTRLQQTAPGISVKTIYSTGHDSLEDLVTGKVDFAIGFQTPDMSHHSQLGVIEGFRDDYIVAVSSRHPRITDNLTLEQFLEEGHVVVNPWNEARGAIDLELEKLNIRRRTIVELPSLLSAPAIVATSELITTLPARAIATLFSSEALTCFTVPFSVSPYALNVYFHNGRSITPGHHWMREVIHEVMNTLTHTKLHELSSAAHMISSH
SIO_010081: J1C59_RS21630
subclass of: SO_0000673
so part of: J1C59_RS21630
location: complement(50673..51647)
location: region:50673-51647:-1
so has part: feature:50673-51647:-1:exon

WP_242281418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50673-51647:-1:exon

J1C59_RS21635
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21635
so part of: sequence
location: 51741..52232
location: region:51741-52232:1
so has part: feature:51741-52232:1:exon
subclass of: SO_0000010

position:51741:1
position: 51741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52232:1
position: 52232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51741-52232:1:exon

J1C59_RS21635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007891167.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MTSPVFRKVSMSDLDRCYAIESEAYEGDEAATREKIATRIQQYSEGFLCAELDGVLIGFINSGCAWDVVMSDEEFKELIGHDDAAPNVVIMSVVLDPAYQGKGYAGLMMRAFISAMREKGKKTIHLMCKTHHVELYRKFGYVYIKPSDSDHGGMAWHEMIMTL
SIO_010081: J1C59_RS21635
subclass of: SO_0000673
so part of: J1C59_RS21635
location: 51741..52232
location: region:51741-52232:1
so has part: feature:51741-52232:1:exon

WP_128085890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51741-52232:1:exon

J1C59_RS21640
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21640
so part of: sequence
location: 52341..53822
location: region:52341-53822:1
so has part: feature:52341-53822:1:exon
subclass of: SO_0000010

position:52341:1
position: 52341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53822:1
position: 53822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52341-53822:1:exon

J1C59_RS21640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011147074.1
GO process: GO:0006865 - amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid permease
translation: MSSFCEPSSQTGLRRVLKSRHMSMIAIGGSVGTGLFIASGATISQAGPAGALLSYILIGVMVYFVMTSLAELATAMPESGSFALYGARYVDEGFGFALGWNFWFSWAVAVAVDLVAAQLVMGYWLPDVPGWVWSATFLVIIFLLNAVSVRGFGEAEYWFSLIKVTTVLLFIITGLMMIAGILRGAPSSGFDNWFTGGGPFSGGFTALIGTAMIAGVSFQGTELVGIAAGESDNPAKAIPRAVRQVFWRILLFYVFAILVISLIVPSDDPRLLRNDIADISVSPFALVFRNAGLLSAAAVMNAVILTSVVSAGNSGVYSSTRMLFNLAREGNAPRIFFRLTQHGVPLYALVATIMVAALCLLTSLFGNHEVYMWLLNMTGMTGFICWAGIAISHYRFRRGFVRQGHKLSRPPYRAAWFPVEPALAFGMCVVVMLGQNYMAFMHQSVDWYNVAATYVGIPLFLLTWLGYRIANKSRFVSYDDMIFPEEVTGDKQV
SIO_010081: J1C59_RS21640
subclass of: SO_0000673
so part of: J1C59_RS21640
location: 52341..53822
location: region:52341-53822:1
so has part: feature:52341-53822:1:exon

WP_128085891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52341-53822:1:exon

J1C59_RS21645
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21645
so part of: sequence
location: complement(54136..55704)
location: region:54136-55704:-1
so has part: feature:54136-55704:-1:exon
subclass of: SO_0000010

position:54136:-1
position: 54136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55704:-1
position: 55704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54136-55704:-1:exon

J1C59_RS21645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019104957.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MERLLSAENARLRALLDTQQRSLEQMAENNRLLSQRVAAYASEISRLKALVAKLQLMQFGKSSEKLREKTQRQVRQAEERISALQEEMAEVLGEQHEPVLPPPLRQSSARKPLPASLHREIRMLPPTEIACPACGGELSALGCDVSEQLELISSAFKVIETQRPKLACCRCDRIVQAPMPSKPIERSYAGPGLLARIVTAKFAEHTPHYRQSEIYSRQGVELSRATLGRWSGAVSELLEPLYDLLRQYVLMPGKVHTDDIPAPVQEPGSGKTRTARLWVYVRDDRNAGSHLPPATWFAYSPDRKSIHPQQHLAGYSGILQADAYSGYNALYEDGRITEAACMAHARRKIHDVHARTPTGITTEALRRIGELYAIEAEIRGSPADERLAARKVRSIPLMQSLYDWVQQQMTILSRHSDTAKAFTYLLKQWDVLNLYCRNGWAEMDNNIAENALRGVALGRKNWLFAGSDRGGERAAVLYSLIGTCRLNDVDSEAWLRYVLSHIQDWPVNRLPWKADLTSAVLT
SIO_010081: J1C59_RS21645
subclass of: SO_0000673
so part of: J1C59_RS21645
location: complement(54136..55704)
location: region:54136-55704:-1
so has part: feature:54136-55704:-1:exon

WP_128085892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54136-55704:-1:exon

J1C59_RS21650
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
gene: tnpB
locus tag: J1C59_RS21650
so part of: sequence
location: complement(55766..56071)
location: region:55766-56071:-1
so has part: feature:55766-56071:-1:exon
subclass of: SO_0000010

position:55766:-1
position: 55766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56071:-1
position: 56071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55766-56071:-1:exon

J1C59_RS21650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
gene: tnpB
locus tag: J1C59_RS21650
inference: COORDINATES: similar to AA sequence:RefSeq:NP_858152.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MISFPSGARIWLVAGVTDMRCSLNGLAAKVQNTLRADPFGGHLFIFRGRRGDMVKILWADADGLCLFTKRLERGHFVWPVNRDGRVHLTQAQLAMLLEGIN
SIO_010081: J1C59_RS21650
subclass of: SO_0000673
so part of: J1C59_RS21650
location: complement(55766..56071)
location: region:55766-56071:-1
so has part: feature:55766-56071:-1:exon

WP_128085893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55766-56071:-1:exon

J1C59_RS21655
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
gene: tnpA
locus tag: J1C59_RS21655
so part of: sequence
location: complement(56068..56670)
location: region:56068-56670:-1
so has part: feature:56068-56670:-1:exon
subclass of: SO_0000010

position:56068:-1
position: 56068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56670:-1
position: 56670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56068-56670:-1:exon

J1C59_RS21655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
gene: tnpA
locus tag: J1C59_RS21655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013512914.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66-like element accessory protein TnpA
translation: MDRNTPYTSRPWIITALSLRFNDALTYREIAEQLNISTSATHKMFKRFRRTGINWPLPEDYTPERLEEELYAFNLETNLPVKKRRPDWPLEFKIRMAELSLQPDACVAQLAREHGVNDNLVFNWRNLHRQGLLDPATRAGMIPVMVEPFPVPVRQSSGVPDSPPVISCKLTMPGGTLSLTGPVTPELLRALVSELRESEV
SIO_010081: J1C59_RS21655
subclass of: SO_0000673
so part of: J1C59_RS21655
location: complement(56068..56670)
location: region:56068-56670:-1
so has part: feature:56068-56670:-1:exon

WP_242281419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56068-56670:-1:exon

J1C59_RS21660
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21660
so part of: sequence
location: complement(57453..57947)
location: region:57453-57947:-1
so has part: feature:57453-57947:-1:exon
subclass of: SO_0000010

position:57453:-1
position: 57453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57947:-1
position: 57947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57453-57947:-1:exon

J1C59_RS21660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21660
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013199721.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MDKFYVRHMTRADLSFFMSQCEESARDSHLHVSLLNPEENNAFKKQIEAALRLNESAHHSGHFLLMLVCRADDQRAGFLWVCASRDLTGTACIEISVIHVVRAMRGNGGGSLLLSVAIDGYKNHRITAKCYPASSQMNRMLKRCGFEVMGTSERGSEYLCLLPD
SIO_010081: J1C59_RS21660
subclass of: SO_0000673
so part of: J1C59_RS21660
location: complement(57453..57947)
location: region:57453-57947:-1
so has part: feature:57453-57947:-1:exon

WP_242281420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57453-57947:-1:exon

J1C59_RS21665
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21665
so part of: sequence
location: complement(58029..58331)
location: region:58029-58331:-1
so has part: feature:58029-58331:-1:exon
subclass of: SO_0000010

position:58029:-1
position: 58029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58331:-1
position: 58331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58029-58331:-1:exon

J1C59_RS21665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21665
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEITYSIDYQYKEKHNDRPTASGNVIRSSGEETPVMFIPDVGDFVEIAGNPENSEHLTSFRGIVVSRFYRYLRVSDSEVFCHINIVIEESVQDFSNLVNE
SIO_010081: J1C59_RS21665
subclass of: SO_0000673
so part of: J1C59_RS21665
location: complement(58029..58331)
location: region:58029-58331:-1
so has part: feature:58029-58331:-1:exon

WP_242281421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58029-58331:-1:exon

J1C59_RS21670
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21670
so part of: sequence
location: complement(58479..58736)
location: region:58479-58736:-1
so has part: feature:58479-58736:-1:exon
subclass of: SO_0000010

position:58479:-1
position: 58479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58736:-1
position: 58736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58479-58736:-1:exon

J1C59_RS21670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21670
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVPDSHPLLPLYGENFHTDYERHTAEAIDLLNVLSQGLCDKKLPERQRLFEIAQLSCSLWEYRTGSVQKMTPEWQVRYSHDRQRL
SIO_010081: J1C59_RS21670
subclass of: SO_0000673
so part of: J1C59_RS21670
location: complement(58479..58736)
location: region:58479-58736:-1
so has part: feature:58479-58736:-1:exon

WP_128085895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58479-58736:-1:exon

J1C59_RS21675
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
gene: iraP
locus tag: J1C59_RS21675
so part of: sequence
location: 59437..59784
location: region:59437-59784:1
so has part: feature:59437-59784:1:exon
subclass of: SO_0000010

position:59437:1
position: 59437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59784:1
position: 59784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59437-59784:1:exon

J1C59_RS21675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
gene: iraP
locus tag: J1C59_RS21675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013360048.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anti-adapter protein IraP
translation: MKNVVLSMLAKISHIDAGMKQLTARVEAQSLLISALVLAVSREGGVTEMIESANKAINTVIDSAESDELLKSDAAILLSELQALLSISAAVDGADEEINHEALDKLTGVTSLEEQ
SIO_010081: J1C59_RS21675
subclass of: SO_0000673
so part of: J1C59_RS21675
location: 59437..59784
location: region:59437-59784:1
so has part: feature:59437-59784:1:exon

WP_031594190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59437-59784:1:exon

J1C59_RS21680
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21680
so part of: sequence
location: complement(60640..60783)
location: region:60640-60783:-1
so has part: feature:60640-60783:-1:exon
subclass of: SO_0000010

position:60640:-1
position: 60640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60783:-1
position: 60783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60640-60783:-1:exon

J1C59_RS21680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21680
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRDAAGGVFLFPQAQCRFSFPDGGKGCLPACGILFRHQHLLQPEEQR
SIO_010081: J1C59_RS21680
subclass of: SO_0000673
so part of: J1C59_RS21680
location: complement(60640..60783)
location: region:60640-60783:-1
so has part: feature:60640-60783:-1:exon

WP_158086883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60640-60783:-1:exon

J1C59_RS21685
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21685
so part of: sequence
location: complement(60840..61061)
location: region:60840-61061:-1
so has part: feature:60840-61061:-1:exon
subclass of: SO_0000010

position:60840:-1
position: 60840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61061:-1
position: 61061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60840-61061:-1:exon

J1C59_RS21685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013357654.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRQESEVGTDRPDNMDSIQSVIGHAVSSLLKSGEEVGVQEILAFLKQQEARSVDGRKKLYGRAISVVADDTDR
SIO_010081: J1C59_RS21685
subclass of: SO_0000673
so part of: J1C59_RS21685
location: complement(60840..61061)
location: region:60840-61061:-1
so has part: feature:60840-61061:-1:exon

WP_208721839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60840-61061:-1:exon

J1C59_RS21690
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21690
so part of: sequence
location: complement(61158..61625)
location: region:61158-61625:-1
so has part: feature:61158-61625:-1:exon
subclass of: SO_0000010

position:61158:-1
position: 61158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61625:-1
position: 61625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61158-61625:-1:exon

J1C59_RS21690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006297806.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family transcriptional regulator
translation: MKDEPHGNRDAAPETIDQFLCFALYSASLAMTKLYQPRLKPLGLTYPQYLVLLVLWEQDGLTVSGLGARVRLDSGTLSQLLKRLEQTGVICRQRDTQQDERRVLISLTEQGRRLKITAAGVPADMVSVMDTARDELSELTERVSALRERLARARA
SIO_010081: J1C59_RS21690
subclass of: SO_0000673
so part of: J1C59_RS21690
location: complement(61158..61625)
location: region:61158-61625:-1
so has part: feature:61158-61625:-1:exon

WP_128085897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61158-61625:-1:exon

J1C59_RS21695
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21695
so part of: sequence
location: complement(61761..62060)
location: region:61761-62060:-1
so has part: feature:61761-62060:-1:exon
subclass of: SO_0000010

position:61761:-1
position: 61761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62060:-1
position: 62060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61761-62060:-1:exon

J1C59_RS21695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013360055.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTYHSEAVFAGTDRITSLKADVDALLRQLSEGEYLSVDAFANNWVHLTALYARIQEQMNDRVLMDRLVRTDLLLTADLMAVGRMIMVMNNFLRCTASTR
SIO_010081: J1C59_RS21695
subclass of: SO_0000673
so part of: J1C59_RS21695
location: complement(61761..62060)
location: region:61761-62060:-1
so has part: feature:61761-62060:-1:exon

WP_128085898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61761-62060:-1:exon

J1C59_RS21700
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21700
so part of: sequence
location: complement(62057..63601)
location: region:62057-63601:-1
so has part: feature:62057-63601:-1:exon
subclass of: SO_0000010

position:62057:-1
position: 62057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63601:-1
position: 63601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62057-63601:-1:exon

J1C59_RS21700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010245756.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MKISTHLSAGSGLLILLFVLCTGIAVHALRQATEGMNDTVDVKMKRFAVVVNMRNSMRDMAIAARNLALLSDPAQMQPEWPRMTAQREVYIQKRQQLEKSMSVNVSAQGKTLLEKSLSAEDAALSTLMAAGKLGLENRQQEATAFLMTTARPAQRVLLNTLDNLTDTEMQLSRDTGAENSARTARTAVILSGLAALSVLLSVGTCYLLVRMLMRQLGGEPAQAQALAAAIAAGDLTSPVTLRRGDTASLLASLDGMQANLRGLVSQIKDASASVALAADEISQGNTELSSRTEQQAAALQETAASMEQLTATVKSNAAGAHQTAGTARETATLARAGEADVQRMSETMNEISLSAVRVRDITSVIEGIAFQTNILALNAAVEAARAGEEGRGFAVVAGEVRSLAQRSASAARDIKLLIEQAVSQVEGGVAAAAGTGESILRIVGMVGELADAMDSLSLSSGEQMQGISQVSIAVSQMDGVTQNNAALVEESSSASQSLSEQARALRGMVETFRV
SIO_010081: J1C59_RS21700
subclass of: SO_0000673
so part of: J1C59_RS21700
location: complement(62057..63601)
location: region:62057-63601:-1
so has part: feature:62057-63601:-1:exon

WP_140916874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62057-63601:-1:exon

J1C59_RS21705
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21705
so part of: sequence
location: 64648..66222
location: region:64648-66222:1
so has part: feature:64648-66222:1:exon
subclass of: SO_0000010

position:64648:1
position: 64648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66222:1
position: 66222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64648-66222:1:exon

J1C59_RS21705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21705
EC number: 2.7.7.65
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017802604.1
GO function: GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sensor domain-containing diguanylate cyclase
translation: MLLKKFRLRSLLISLSVGGVIMTACLLLGSLLIFQKTNIEDSLLESNIAYARKLADTTDRYLGTAQRELAWSAVQIKGLTDPAQLRAETDRLRLQSGFFNTVVVVNRDAVIAATSPESLSLIGVKLHSDASRQAITTQKPFISAPFTSASGNYVVFISQPLFTADGHYLGYIGGTIYLKKQSILSDILSLHFYTRGFSVSIVSNDGLIIFSHDPARVGTKMLLDSALKKQLASTDSGRFSTESHGQQVLTGYASLHKTDWNIFIAGTSETVRDILVRTAENAVWFLMGIIVLTVAVVTLLAGCIASPLEKLAGMVRNEGSDASLAPVQAWYYEADRLKQAVEEYRHVMAGRMATLSDEAMTDPLTGLSNRRGFTLQADRSTGDAGQCVIAIDIDHFKKINDWYGHDAGDAVLVSLAGLLKQACRTGDVVSRFGGEEFILLLPQTSLEDAARMAERIRALVSTTTFPFVGAMTVSAGVAALADSGGNRDGMLRRADEALYEAKGAGRDAVIVAGPEGFRRHMTPV
SIO_010081: J1C59_RS21705
subclass of: SO_0000673
so part of: J1C59_RS21705
location: 64648..66222
location: region:64648-66222:1
so has part: feature:64648-66222:1:exon

WP_128085361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64648-66222:1:exon

J1C59_RS21710
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21710
so part of: sequence
location: complement(66235..68016)
location: region:66235-68016:-1
so has part: feature:66235-68016:-1:exon
subclass of: SO_0000010

position:66235:-1
position: 66235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68016:-1
position: 68016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66235-68016:-1:exon

J1C59_RS21710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006118233.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sensor domain-containing phosphodiesterase
translation: MVMNLTGDEDRRARTLKALRTPDESRDDVLRRFVRLASQALGIPGSFISVLDDEHQHVQAAHNFALTQSSRENSLCRHAVDSDSAVVVPDTWLDARFMTHPLITGAPYIRFYAGVPLKNRQGIVLGTLCVTDTAPHPFSADQLTTLKLLAALVMSFLEAWHSAGFADPVTGLPNRQRLIRDLQYLAASGEPSSRRLVLIDCIDMPRAYELARSMGMGPVESLLKDVATLLPLRLRPAPGELLYTVATGRFAILTREDSHMSADWIAGRMEGISADLGDGIAVALSTYAGEITFVTGSITAQEALRRAVSALHEAIGRGVPAMRFSLDCDARHTRDFTLMNDLAAALRENSGLWLAYQPKICFHSGRPVGLEALVRWRHPVRGELSPALFMPLAEQTSLLSELTAWVTDHAIGRLTRLRNSVIQLPVTVNVSSRDFAREGFADALEVKMIKARLSPSLLGIECLETERIIENPAAMRGLEMLKLRGFGISLDDFGTGYSNISYLRRMPLDVIKLDRSLISEISSDPASRIIARSIIAMLKDLDYTVLAEGVEDAATVSALTEYGCDQAQGFFYSRPLPEAELDEWLSWRLRGQC
SIO_010081: J1C59_RS21710
subclass of: SO_0000673
so part of: J1C59_RS21710
location: complement(66235..68016)
location: region:66235-68016:-1
so has part: feature:66235-68016:-1:exon

WP_140916873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66235-68016:-1:exon

J1C59_RS21715
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21715
pseudo: true
so part of: sequence
location: 68362..69756
location: region:68362-69756:1
so has part: feature:68362-69756:1:exon
subclass of: SO_0000010

position:68362:1
position: 68362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69756:1
position: 69756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68362-69756:1:exon

J1C59_RS21715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014594672.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
SIO_010081: J1C59_RS21715
subclass of: SO_0000673
so part of: J1C59_RS21715
location: 68362..69756
location: region:68362-69756:1
so has part: feature:68362-69756:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68362-69756:1:exon

J1C59_RS21720
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21720
so part of: sequence
location: 70302..70541
location: region:70302-70541:1
so has part: feature:70302-70541:1:exon
subclass of: SO_0000010

position:70302:1
position: 70302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70541:1
position: 70541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70302-70541:1:exon

J1C59_RS21720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010256895.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MGNQHLYSPVVVRPDVRELRLPAGLSQEAAAERFELSLRVWQMKEAAKNPAPLSQGEYELLLLLAGRHPFYALVQKPKK
SIO_010081: J1C59_RS21720
subclass of: SO_0000673
so part of: J1C59_RS21720
location: 70302..70541
location: region:70302-70541:1
so has part: feature:70302-70541:1:exon

WP_128085384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70302-70541:1:exon

J1C59_RS21725
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21725
so part of: sequence
location: 70965..73091
location: region:70965-73091:1
so has part: feature:70965-73091:1:exon
subclass of: SO_0000010

position:70965:1
position: 70965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73091:1
position: 73091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70965-73091:1:exon

J1C59_RS21725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014594671.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MAPYQQPGALPENALDRLTTLAARLFRVPTAFVSLIDGQRQFFPSRYGLNITGTARHSAFCDHTLAQEDILCVSDTFDDPRFRNSPLVHGYPYIRFYAGIPLTTPDGHRIGTVCLADTQPRPPLTDADRQHLADIAALVMDRMEVHRIGQLRHVSQQRLESISATSPDAIICTDLSRGIIFWNPAATAMFGYSAREMTGQYVAGLIPERCQADYRNELDRLTGEEAAMSQPHTLQIWGLRRDGSEFPADVSFSGWQEDGERLAGMIIRDVTARYESEARLCELASLDMLTRLASRGAFMQQLGQLTEAGVPYTLLMTDLDGFKEVNDTLGHAAGDALLCHVAEQIRQVCTDAITAARLGGDEFIILLPGGSTGAGLTAEQLIAAVQTPFSYHGSPVLVGASTGVAAYPEHGEDASSVMSAADLALYRAKASGKGCSVMFRPEFLDAEQRRRRFERELEAAVRHQQFILHYQPRYDAGNGRLLGCEALVRWQHPSRGLLLPSEFMDMLVKSPLSVTLGDWIIRTALLQTRQWQILYPQLRISINLFPRQLAGNGLESVLGESAGGDAAFVDLEVDEPLLTGLIQDSPAQFVAIRRTGAAFIIDHYGRTLGAIRLLRHGFVTGFKIDKSLTLELNTSSRARVMFHAIAALGKSLGLSVAAEGIEDTAQRMFVTSARCDIMQGNALCRPLTAAAFEALLIAENDHMTLRDI
SIO_010081: J1C59_RS21725
subclass of: SO_0000673
so part of: J1C59_RS21725
location: 70965..73091
location: region:70965-73091:1
so has part: feature:70965-73091:1:exon

WP_128085385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70965-73091:1:exon

J1C59_RS21730
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
gene: umuC
locus tag: J1C59_RS21730
pseudo: true
so part of: sequence
location: <73572..74615
location: region:73572-74615:1
so has part: feature:73572-74615:1:exon
subclass of: SO_0000010

position:73572:1
position: 73572
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:74615:1
position: 74615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73572-74615:1:exon

J1C59_RS21730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
gene: umuC
locus tag: J1C59_RS21730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010260381.1
GO function: GO:0003684 - damaged DNA binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: translesion error-prone DNA polymerase V subunit UmuC
SIO_010081: J1C59_RS21730
subclass of: SO_0000673
so part of: J1C59_RS21730
location: <73572..74615
location: region:73572-74615:1
so has part: feature:73572-74615:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:73572-74615:1:exon

J1C59_RS21735
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21735
so part of: sequence
location: complement(74747..75148)
location: region:74747-75148:-1
so has part: feature:74747-75148:-1:exon
subclass of: SO_0000010

position:74747:-1
position: 74747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75148:-1
position: 75148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74747-75148:-1:exon

J1C59_RS21735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013317263.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKVKRISEDFTPATSKATAPSRMNKDGTSSALSLDDFTGEYRDVVKELVAMKRQISQASGNPVNPVLNKIVEQAVMRIVHVGQKQRIAPSKVRKNVMASSAQSRITSEWKPQADLERRAGMLAGSAKLRKIG
SIO_010081: J1C59_RS21735
subclass of: SO_0000673
so part of: J1C59_RS21735
location: complement(74747..75148)
location: region:74747-75148:-1
so has part: feature:74747-75148:-1:exon

WP_128085363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74747-75148:-1:exon

J1C59_RS21740
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21740
so part of: sequence
location: complement(75214..75771)
location: region:75214-75771:-1
so has part: feature:75214-75771:-1:exon
subclass of: SO_0000010

position:75214:-1
position: 75214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75771:-1
position: 75771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75214-75771:-1:exon

J1C59_RS21740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019105454.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGTAQEHREKREYALSLAYERIVDEFLTAIPVIESILFERIKSDDWSIVHPAWRVHYDRKDLRIDFNWWRQRNKRRDKLDVSIWCDGELCGMFLAKLSRRRITVALRYLESNPYPNPLLGYMLPIGLIIAESFAIAYEAKEVAVSQPDKSLIPLYRQRGYQLNAADLSREKRKCDIRAKVLVKKV
SIO_010081: J1C59_RS21740
subclass of: SO_0000673
so part of: J1C59_RS21740
location: complement(75214..75771)
location: region:75214-75771:-1
so has part: feature:75214-75771:-1:exon

WP_128085364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75214-75771:-1:exon

J1C59_RS21745
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21745
so part of: sequence
location: complement(75886..76653)
location: region:75886-76653:-1
so has part: feature:75886-76653:-1:exon
subclass of: SO_0000010

position:75886:-1
position: 75886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76653:-1
position: 76653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75886-76653:-1:exon

J1C59_RS21745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21745
inference: COORDINATES: protein motif:HMM:NF025027.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4145 domain-containing protein
translation: MPQSLFTWFTPQLCPGWLCPACQSASLAILPDTFMRFENAFTRLNKSEDWFEPEHYAYIFNCMLQCARSTCREVVSVSGIGADEFDYQHDEERDYTGPTYTEFFQARHFCPPLPLFLVPDACPDSVRCQLTEISSLLAAHPAAAANAIRSLLEVLLDDLKVPRAEARTNRTPRPLNLHGRLQNLKVIQAGHYDGMMALKMLGNAGSHGGKQIEQQHLDDACAVLELLINQLYQRQPDLSSQIERLNRAFAKKPVD
SIO_010081: J1C59_RS21745
subclass of: SO_0000673
so part of: J1C59_RS21745
location: complement(75886..76653)
location: region:75886-76653:-1
so has part: feature:75886-76653:-1:exon

WP_128085365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75886-76653:-1:exon

J1C59_RS21750
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21750
so part of: sequence
location: complement(76764..77474)
location: region:76764-77474:-1
so has part: feature:76764-77474:-1:exon
subclass of: SO_0000010

position:76764:-1
position: 76764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77474:-1
position: 77474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76764-77474:-1:exon

J1C59_RS21750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000928600.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MLMPAAGVTGVSVLSWETALALRDMALLQPDLPKYLLAPEVAVLLSQFEDERQRMLFAFLWNTGARITEALMVTPEDVQLDGLRPFVRLRTLKQRNRGRGRPGKDEKIARVVPLLDATFVRELRRYLATFRPGRRTPLFAVTRKTAWIWLQQALERAAATGIGFSVDSVSPRTFRHSFAMQLFLNHVPPKVVQTYMGHERYESTEQYLKIFALDVAPQLGIRFSLDAQDFMGMLMK
SIO_010081: J1C59_RS21750
subclass of: SO_0000673
so part of: J1C59_RS21750
location: complement(76764..77474)
location: region:76764-77474:-1
so has part: feature:76764-77474:-1:exon

WP_128085366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76764-77474:-1:exon

J1C59_RS21755
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21755
so part of: sequence
location: complement(77636..78235)
location: region:77636-78235:-1
so has part: feature:77636-78235:-1:exon
subclass of: SO_0000010

position:77636:-1
position: 77636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78235:-1
position: 78235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77636-78235:-1:exon

J1C59_RS21755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21755
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MELKNGTVLIPNEFQDVTLSIWQKILLWLGRPIFVTLKSGKVCIVFIEDDRLKYKCGFRSVEGARKAWKERAAPESDSIDEDEDEDEDEDDGDGGGGGGSGGRSGGRSGGDVPGVGVPRPTPTPRPTPYPGPKPNPPEEEKKKKKKEEPEPAPEPPVEPEEPGDDPFIDEPDEIIPRPTETPELVPDVPVTRPSRRRPR
SIO_010081: J1C59_RS21755
subclass of: SO_0000673
so part of: J1C59_RS21755
location: complement(77636..78235)
location: region:77636-78235:-1
so has part: feature:77636-78235:-1:exon

WP_140916966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77636-78235:-1:exon

J1C59_RS21760
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21760
so part of: sequence
location: complement(78665..79987)
location: region:78665-79987:-1
so has part: feature:78665-79987:-1:exon
subclass of: SO_0000010

position:78665:-1
position: 78665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79987:-1
position: 79987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78665-79987:-1:exon

J1C59_RS21760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21760
inference: COORDINATES: protein motif:HMM:NF028182.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative phage abortive infection protein
translation: MEYIHSLVTALQEFWTALRTGKNHTSDISMLIVTAIGVFFSTLAAFFTARAAVATRNSTKVSEAALLHTQHTSRRDEFISQYTILLEQHKEQLNVVKSYLSTVEGLKLLNGIIMGTDHLSAFKKLQGHNIVSPYMRVLYHLLRHIDFHYDENATTKDKKLYSSTVRSLIRNDVLLLVAVNASYVFEDNKENDYGKYQKLLRKFNFFEHAHFFIEKDVTSGFDKYAVSRVKHSILEAMINNHEEKILFDKNSFRFRSESFRIPFIVSCIFDNPLNLESLECLNNIGNLYKDEADQASERNINFLRGEANIESFFHLYLYRRRIRLSGGELLKLEDSRNIDADTYSKLPFVDEDYIKNCLSYMRANNHLNVSDDYYIHTQGENHFVDIIYPDYFSTDCKRFLKLEKHLEYIVSRDADREHIRNEQLKLSDFRSAVLRQRVTT
SIO_010081: J1C59_RS21760
subclass of: SO_0000673
so part of: J1C59_RS21760
location: complement(78665..79987)
location: region:78665-79987:-1
so has part: feature:78665-79987:-1:exon

WP_128085368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78665-79987:-1:exon

J1C59_RS21765
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21765
so part of: sequence
location: 80219..80881
location: region:80219-80881:1
so has part: feature:80219-80881:1:exon
subclass of: SO_0000010

position:80219:1
position: 80219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80881:1
position: 80881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80219-80881:1:exon

J1C59_RS21765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017802808.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLERLLRREGLAIAVGTMLLYTAVYFFERGYCTRLNIPLDYIEISIPTIANDVMYSFFLIFPIAVISMIIMIAGEKNEYKGRYAFSPFYCWLVYTVVFFYFMEHTWGNAFTSFFLGGLFFMQLPSPEKATDSSPLWTGYYSSFIRFTMALFLVSSTFVIHGNSFAAKTSFNTYIQNGKKYALLKAYGENVFMQEIVDGKRVSEITYFNAKNMTGMTLTSN
SIO_010081: J1C59_RS21765
subclass of: SO_0000673
so part of: J1C59_RS21765
location: 80219..80881
location: region:80219-80881:1
so has part: feature:80219-80881:1:exon

WP_128085369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80219-80881:1:exon

J1C59_RS21770
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21770
so part of: sequence
location: complement(80938..81231)
location: region:80938-81231:-1
so has part: feature:80938-81231:-1:exon
subclass of: SO_0000010

position:80938:-1
position: 80938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81231:-1
position: 81231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80938-81231:-1:exon

J1C59_RS21770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013199719.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAGKLERPQVQRPAAAKPEQESRLTNVRTKRNRTTSETPKTIRLTADEKLMCAKLTGAVQDLAPSKTITDSTILRAALYLANQAGPEKLVKMVKEYL
SIO_010081: J1C59_RS21770
subclass of: SO_0000673
so part of: J1C59_RS21770
location: complement(80938..81231)
location: region:80938-81231:-1
so has part: feature:80938-81231:-1:exon

WP_128085370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80938-81231:-1:exon

J1C59_RS21775
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21775
so part of: sequence
location: complement(81231..82055)
location: region:81231-82055:-1
so has part: feature:81231-82055:-1:exon
subclass of: SO_0000010

position:82055:-1
position: 82055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81231-82055:-1:exon

J1C59_RS21775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013199720.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MAGNGSEQQAFVIAAMSNKGGPGKTSSTTNTAVALAQMGKRVLVIDADQQANATEVLTHGRKFYAQFGPTICDLYNNQKFDVRDVIIPAKNGEEDIQDLFLIPSDPSFERVMENSMARPHREKILLRHLKPVMSEFDFILIDCSPALNLSSTNAAYVADHVIIPIDGGSFSLTGAETVLDYLDEIKEEQFSHYSLFRNEFNSSKKKMNTFLQDELEGNERFKNNVLETRIRADENIAQAQVVCKPLYFYKRGALVLNDYRAMAKEIISIKEGAH
SIO_010081: J1C59_RS21775
subclass of: SO_0000673
so part of: J1C59_RS21775
location: complement(81231..82055)
location: region:81231-82055:-1
so has part: feature:81231-82055:-1:exon

WP_128085371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81231-82055:-1:exon

J1C59_RS21780
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21780
so part of: sequence
location: 82423..83046
location: region:82423-83046:1
so has part: feature:82423-83046:1:exon
subclass of: SO_0000010

position:82423:1
position: 82423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83046:1
position: 83046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82423-83046:1:exon

J1C59_RS21780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020805646.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADRVFPPAAATPDAALERWHRLINQAMSEPSNVRAAGELYRGASWLRARSIASRWHGTELWAMSAGLGLRHHSDPAVTYEATFHAMPFAPAVIWAGLTTRPPVPGRCASLAQLMQSCPNDRFVIAGSPVYASAAERDILAGIPALRDAGQLTIVTSKGYRGPLEPWVKRSSAAMMTALKSNMTCLNIACAGALIDSMMCADALKAG
SIO_010081: J1C59_RS21780
subclass of: SO_0000673
so part of: J1C59_RS21780
location: 82423..83046
location: region:82423-83046:1
so has part: feature:82423-83046:1:exon

WP_242281422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82423-83046:1:exon

J1C59_RS21785
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21785
so part of: sequence
location: complement(83142..83387)
location: region:83142-83387:-1
so has part: feature:83142-83387:-1:exon
subclass of: SO_0000010

position:83142:-1
position: 83142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83387:-1
position: 83387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83142-83387:-1:exon

J1C59_RS21785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21785
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNRDQATLPQSIAHPEAQDTSEPGQDNERNQGTQLQTQKADAEALKAYLKYRAENPEKHVVIDEMPRRPLNIDMHEYSKK
SIO_010081: J1C59_RS21785
subclass of: SO_0000673
so part of: J1C59_RS21785
location: complement(83142..83387)
location: region:83142-83387:-1
so has part: feature:83142-83387:-1:exon

WP_128085373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83142-83387:-1:exon

J1C59_RS21790
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21790
so part of: sequence
location: complement(83765..84121)
location: region:83765-84121:-1
so has part: feature:83765-84121:-1:exon
subclass of: SO_0000010

position:83765:-1
position: 83765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84121:-1
position: 84121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83765-84121:-1:exon

J1C59_RS21790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21790
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKMLIALMFLAPVAVQADEDVHSLEAIKKTATEYLEIDNTIEGRTAAVIHTVTVDTAAHEVRFSFTRFTKFNNYATCESVKGHLTYEFLKVDEADKMLVKEIEQQSSACEFRQVPPQ
SIO_010081: J1C59_RS21790
subclass of: SO_0000673
so part of: J1C59_RS21790
location: complement(83765..84121)
location: region:83765-84121:-1
so has part: feature:83765-84121:-1:exon

WP_128085374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83765-84121:-1:exon

J1C59_RS21795
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21795
so part of: sequence
location: complement(84179..84838)
location: region:84179-84838:-1
so has part: feature:84179-84838:-1:exon
subclass of: SO_0000010

position:84179:-1
position: 84179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84838:-1
position: 84838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84179-84838:-1:exon

J1C59_RS21795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21795
EC number: 3.4.-.-
inference: COORDINATES: protein motif:HMM:NF014566.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0071586 - CAAX-box protein processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CPBP family intramembrane metalloprotease
translation: MAGIVRPFFKTVLLAAAGIFIYLSWMTALSHGDQLGFELNLILYSQTLQHLAGLATLLILAIPYCIWVRPLPAGRLQVKQTALFTLGMLAIYLTCFLAEKVMNVPGEAWVKMMLSLPALPLSAFVFTVILLAPLSEEIVFRGVLLNIFITRNPWTGYVGAVLISAVFAMMHTQYHHLTTYLELFGVALLLNLARLRSGGLLLPVLLHAEASVIALLLNL
SIO_010081: J1C59_RS21795
subclass of: SO_0000673
so part of: J1C59_RS21795
location: complement(84179..84838)
location: region:84179-84838:-1
so has part: feature:84179-84838:-1:exon

WP_242281423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84179-84838:-1:exon

J1C59_RS21835
type: Gene
subclass of: SO_0000704
RO_0002162: 470932
locus tag: J1C59_RS21835
so part of: sequence
location: 85281..85481
location: region:85281-85481:1
so has part: feature:85281-85481:1:exon
subclass of: SO_0000010

position:85281:1
position: 85281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85481:1
position: 85481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85281-85481:1:exon

J1C59_RS21835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 470932
locus tag: J1C59_RS21835
EC number: 2.3.-.-
inference: COORDINATES: protein motif:HMM:NF013884.2
GO function: GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyltransferase
translation: MQNKNFIDSYRKDIDGLRALAVVLVILFHAGINQIPSGFIGVDIFFAISGFLITGIIVRQKEKKQL
SIO_010081: J1C59_RS21835
subclass of: SO_0000673
so part of: J1C59_RS21835
location: 85281..85481
location: region:85281-85481:1
so has part: feature:85281-85481:1:exon

WP_128085375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85281-85481:1:exon