Prevotella histicola strain F0411 chromosome 2, complete sequence.
Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.
Submitted (21-MAR-2021) Microbiology, The Forsyth Institute, 245 First Street, Cambridge, MA 02142, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP072368.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 22-DEC-2020\nAssembly Method :: Pacbio MA v. 9.0.0.92188\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 550x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/06/2022 20:45:59\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 2,395\nCDSs (total) :: 2,330\nGenes (coding) :: 2,272\nCDSs (with protein) :: 2,272\nGenes (RNA) :: 65\nrRNAs :: 5, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 4, 4 (5S, 16S, 23S)\ntRNAs :: 49\nncRNAs :: 3\nPseudo Genes (total) :: 58\nCDSs (without protein) :: 58\nPseudo Genes (ambiguous residues) :: 0 of 58\nPseudo Genes (frameshifted) :: 30 of 58\nPseudo Genes (incomplete) :: 32 of 58\nPseudo Genes (internal stop) :: 17 of 58\nPseudo Genes (multiple problems) :: 17 of 58\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_004384241.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_009435333.1
COORDINATES: similar to AA sequence:RefSeq:WP_019035941.1
COORDINATES: similar to AA sequence:RefSeq:WP_004290741.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_013671808.1
COORDINATES: similar to AA sequence:RefSeq:WP_004336226.1
trimeric intracellular cation channel family protein
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_007173602.1
COORDINATES: similar to AA sequence:RefSeq:WP_004382209.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004324813.1
COORDINATES: similar to AA sequence:RefSeq:WP_004346553.1
COORDINATES: similar to AA sequence:RefSeq:WP_006848475.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011703.1
GO:0045203 - integral component of cell outer membrane [Evidence IEA]
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0071702 - organic substance transport [Evidence IEA]
SusC/RagA family TonB-linked outer membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_004344345.1
RagB/SusD family nutrient uptake outer membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_007366919.1
COORDINATES: similar to AA sequence:RefSeq:WP_007366920.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011665.1
COORDINATES: similar to AA sequence:RefSeq:WP_004383959.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013265185.1
COORDINATES: similar to AA sequence:RefSeq:WP_004376947.1
COORDINATES: similar to AA sequence:RefSeq:WP_009434974.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007134787.1
COORDINATES: similar to AA sequence:RefSeq:WP_007134788.1
T9SS type A sorting domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007134781.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011748.1
GO:0015485 - cholesterol binding [Evidence IEA]
thiol-activated cytolysin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004338751.1
COORDINATES: similar to AA sequence:RefSeq:WP_007366972.1
COORDINATES: similar to AA sequence:RefSeq:WP_018910541.1
COORDINATES: similar to AA sequence:RefSeq:WP_009229536.1
hydrogen peroxide-inducible genes activator
COORDINATES: similar to AA sequence:RefSeq:WP_004291893.1
GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014710277.1
GO:0016668 - oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor [Evidence IEA]
GO:0009398 - FMN biosynthetic process [Evidence IEA]; GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009435858.1
COORDINATES: similar to AA sequence:RefSeq:WP_009435306.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009230354.1
COORDINATES: similar to AA sequence:RefSeq:WP_010800878.1
COORDINATES: similar to AA sequence:RefSeq:WP_007658838.1
COORDINATES: similar to AA sequence:RefSeq:WP_004353726.1
M6 family metalloprotease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004361194.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265535.1
COORDINATES: similar to AA sequence:RefSeq:WP_008449756.1
COORDINATES: similar to AA sequence:RefSeq:WP_004352635.1
peptidase domain-containing ABC transporter
COORDINATES: protein motif:HMM:NF012801.2
outer membrane beta-barrel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007573796.1
COORDINATES: similar to AA sequence:RefSeq:WP_007573798.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911567.1
COORDINATES: similar to AA sequence:RefSeq:WP_004358012.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006043771.1
COORDINATES: similar to AA sequence:RefSeq:WP_018363121.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009435953.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911078.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009011970.1
COORDINATES: similar to AA sequence:RefSeq:WP_007174549.1
COORDINATES: similar to AA sequence:RefSeq:WP_007173027.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006044717.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_013265120.1
COORDINATES: similar to AA sequence:RefSeq:WP_018910001.1
COORDINATES: protein motif:HMM:TIGR03696.1
RHS repeat-associated core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004384660.1
COORDINATES: similar to AA sequence:RefSeq:WP_008822481.1
COORDINATES: similar to AA sequence:RefSeq:WP_007367262.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265331.1
COORDINATES: similar to AA sequence:RefSeq:WP_007133446.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265602.1
type I restriction endonuclease subunit R
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013265123.1
class I SAM-dependent DNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004358963.1
2-dehydropantoate 2-reductase N-terminal domain-containing protein
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: similar to AA sequence:RefSeq:WP_009011273.1
COORDINATES: similar to AA sequence:RefSeq:WP_007367504.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011271.1
COORDINATES: similar to AA sequence:RefSeq:WP_006951414.1
COORDINATES: similar to AA sequence:RefSeq:WP_008448615.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911247.1
cyclic nucleotide-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013670919.1
COORDINATES: similar to AA sequence:RefSeq:WP_008822901.1
COORDINATES: similar to AA sequence:RefSeq:WP_008822902.1
PepSY-associated TM helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008822903.1
COORDINATES: similar to AA sequence:RefSeq:WP_004359101.1
COORDINATES: similar to AA sequence:RefSeq:WP_009010277.1
COORDINATES: similar to AA sequence:RefSeq:WP_004353736.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671920.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911500.1
GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013265700.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354681.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007368823.1
choice-of-anchor J domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013671071.1
GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016291147.1
COORDINATES: similar to AA sequence:RefSeq:WP_004342920.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265863.1
COORDINATES: similar to AA sequence:RefSeq:WP_004384504.1
COORDINATES: similar to AA sequence:RefSeq:WP_009317672.1
COORDINATES: similar to AA sequence:RefSeq:WP_008563679.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_013265390.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671806.1
GO:0043364 - glycyl-radical enzyme activating activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_009011113.1
anaerobic ribonucleoside-triphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_014708934.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
Cas9, originally named Csn1, is the large, multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes; Derived by automated computational analysis using gene prediction method: Protein Homology.
type II CRISPR RNA-guided endonuclease Cas9
COORDINATES: similar to AA sequence:RefSeq:WP_004367329.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type II CRISPR-associated endonuclease Cas1
COORDINATES: similar to AA sequence:RefSeq:WP_004364539.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008822929.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011758.1
COORDINATES: similar to AA sequence:RefSeq:WP_004359360.1
COORDINATES: similar to AA sequence:RefSeq:WP_007367057.1
GO:0003796 - lysozyme activity [Evidence IEA]
GO:0016998 - cell wall macromolecule catabolic process [Evidence IEA]; GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009010723.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671263.1
COORDINATES: similar to AA sequence:RefSeq:WP_004382064.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004354524.1
DPP IV N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004382062.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265202.1
COORDINATES: similar to AA sequence:RefSeq:WP_007367444.1
COORDINATES: similar to AA sequence:RefSeq:WP_009435604.1
COORDINATES: protein motif:HMM:NF013779.2
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007368799.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911264.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004359174.1
COORDINATES: similar to AA sequence:RefSeq:WP_013264196.1
COORDINATES: similar to AA sequence:RefSeq:WP_007572648.1
COORDINATES: similar to AA sequence:RefSeq:WP_004360392.1
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013265564.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911537.1
Na(+)-translocating NADH-quinone reductase subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_009434649.1
GO:0016021 - integral component of membrane [Evidence IEA]
GO:0010181 - FMN binding [Evidence IEA]; GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
GO:0022904 - respiratory electron transport chain [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
NADH:ubiquinone reductase (Na(+)-transporting) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_007367089.1
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
GO:0006814 - sodium ion transport [Evidence IEA]
NADH:ubiquinone reductase (Na(+)-transporting) subunit C
COORDINATES: similar to AA sequence:RefSeq:WP_007367090.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_006045883.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_004381994.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit F
COORDINATES: similar to AA sequence:RefSeq:WP_004381818.1
COORDINATES: similar to AA sequence:RefSeq:WP_007573567.1
COORDINATES: similar to AA sequence:RefSeq:WP_004381816.1
COORDINATES: similar to AA sequence:RefSeq:WP_004379177.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354341.1
COORDINATES: similar to AA sequence:RefSeq:WP_007573561.1
COORDINATES: similar to AA sequence:RefSeq:WP_006044223.1
COORDINATES: similar to AA sequence:RefSeq:WP_007134785.1
COORDINATES: similar to AA sequence:RefSeq:WP_004335531.1
COORDINATES: similar to AA sequence:RefSeq:WP_013264658.1
low molecular weight protein-tyrosine-phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_013064520.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011984.1
COORDINATES: similar to AA sequence:RefSeq:WP_004360869.1
COORDINATES: similar to AA sequence:RefSeq:WP_014710326.1
COORDINATES: similar to AA sequence:RefSeq:WP_004360870.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045456.1
COORDINATES: similar to AA sequence:RefSeq:WP_008822977.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045458.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF024502.2
COORDINATES: similar to AA sequence:RefSeq:WP_004342849.1
COORDINATES: similar to AA sequence:RefSeq:WP_009436156.1
COORDINATES: similar to AA sequence:RefSeq:WP_013816557.1
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: similar to AA sequence:RefSeq:WP_009010445.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF033516.0
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009435442.1
leucine-rich repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008822992.1
COORDINATES: protein motif:HMM:NF013753.2
COORDINATES: similar to AA sequence:RefSeq:WP_004358777.1
COORDINATES: similar to AA sequence:RefSeq:WP_004358778.1
COORDINATES: similar to AA sequence:RefSeq:WP_004360570.1
COORDINATES: similar to AA sequence:RefSeq:WP_004384495.1
COORDINATES: similar to AA sequence:RefSeq:WP_007411020.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF023645.2
COORDINATES: similar to AA sequence:RefSeq:WP_007367964.1
COORDINATES: similar to AA sequence:RefSeq:WP_008449033.1
COORDINATES: similar to AA sequence:RefSeq:WP_008449046.1
COORDINATES: similar to AA sequence:RefSeq:WP_007367962.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF019997.2
COORDINATES: similar to AA sequence:RefSeq:WP_014298411.1
COORDINATES: similar to AA sequence:RefSeq:WP_013672007.1
COORDINATES: similar to AA sequence:RefSeq:WP_007367377.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045566.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045567.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354539.1
GO:0022900 - electron transport chain [Evidence IEA]
cytochrome c nitrite reductase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004361116.1
ammonia-forming cytochrome c nitrite reductase
COORDINATES: similar to AA sequence:RefSeq:WP_004361117.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361118.1
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009011145.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
GO:0019358 - nicotinate nucleotide salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004337385.1
COORDINATES: similar to AA sequence:RefSeq:WP_018909998.1
COORDINATES: similar to AA sequence:RefSeq:WP_018909999.1
COORDINATES: similar to AA sequence:RefSeq:WP_009435861.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671300.1
COORDINATES: similar to AA sequence:RefSeq:WP_004359485.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_018910085.1
COORDINATES: similar to AA sequence:RefSeq:WP_009010601.1
GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004360365.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009435014.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911510.1
COORDINATES: similar to AA sequence:RefSeq:WP_007368776.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004360361.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018911507.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004382134.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009010604.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013671307.1
COORDINATES: similar to AA sequence:RefSeq:WP_013263983.1
COORDINATES: similar to AA sequence:RefSeq:WP_018910069.1
COORDINATES: similar to AA sequence:RefSeq:WP_009435955.1
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004382225.1
COORDINATES: similar to AA sequence:RefSeq:WP_009435948.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361156.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361158.1
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_008449251.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004382145.1
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004353398.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671562.1
COORDINATES: similar to AA sequence:RefSeq:WP_006847760.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004383232.1
COORDINATES: similar to AA sequence:RefSeq:WP_013264420.1
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
branched-chain amino acid aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009011198.1
COORDINATES: similar to AA sequence:RefSeq:WP_004356463.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009011901.1
gliding motility-associated C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004352378.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009011903.1
COORDINATES: similar to AA sequence:RefSeq:WP_008823064.1
COORDINATES: similar to AA sequence:RefSeq:WP_004336918.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004381716.1
COORDINATES: similar to AA sequence:RefSeq:WP_018910495.1
COORDINATES: similar to AA sequence:RefSeq:WP_009435925.1
COORDINATES: similar to AA sequence:RefSeq:WP_004370900.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361207.1
COORDINATES: similar to AA sequence:RefSeq:WP_008566319.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004360880.1
COORDINATES: similar to AA sequence:RefSeq:WP_004382059.1
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013671064.1
COORDINATES: similar to AA sequence:RefSeq:WP_007368835.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671062.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265884.1
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_018910509.1
COORDINATES: similar to AA sequence:RefSeq:WP_018463332.1
COORDINATES: similar to AA sequence:RefSeq:WP_004352796.1
COORDINATES: similar to AA sequence:RefSeq:WP_018910433.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265871.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018910435.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265534.1
COORDINATES: similar to AA sequence:RefSeq:WP_004360325.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354214.1
COORDINATES: similar to AA sequence:RefSeq:WP_008823087.1
COORDINATES: similar to AA sequence:RefSeq:WP_009434800.1
COORDINATES: similar to AA sequence:RefSeq:WP_014709591.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009434812.1
COORDINATES: similar to AA sequence:RefSeq:WP_009435074.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004367673.1
COORDINATES: similar to AA sequence:RefSeq:WP_004363785.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361162.1
COORDINATES: similar to AA sequence:RefSeq:WP_013264979.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009010722.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007366390.1
COORDINATES: similar to AA sequence:RefSeq:WP_004382236.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265340.1
GDSL-type esterase/lipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019967189.1
COORDINATES: similar to AA sequence:RefSeq:WP_018910060.1
COORDINATES: similar to AA sequence:RefSeq:WP_007366384.1
COORDINATES: similar to AA sequence:RefSeq:WP_004359835.1
COORDINATES: similar to AA sequence:RefSeq:WP_006951480.1
COORDINATES: similar to AA sequence:RefSeq:WP_004359822.1
COORDINATES: similar to AA sequence:RefSeq:WP_004337764.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_004340347.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013265742.1
COORDINATES: similar to AA sequence:RefSeq:WP_004352655.1
transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018910029.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008823116.1
aspartate carbamoyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013265659.1
COORDINATES: similar to AA sequence:RefSeq:WP_009435934.1
COORDINATES: similar to AA sequence:RefSeq:WP_019967387.1
COORDINATES: similar to AA sequence:RefSeq:WP_007366341.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009010633.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
formate-dependent phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009010632.1
FdtA/QdtA family cupin domain-containing protein
COORDINATES: protein motif:HMM:NF018425.2
COORDINATES: similar to AA sequence:RefSeq:WP_013671310.1
COORDINATES: similar to AA sequence:RefSeq:WP_004382045.1
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013265551.1
COORDINATES: similar to AA sequence:RefSeq:WP_004381810.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265756.1
COORDINATES: similar to AA sequence:RefSeq:WP_009012180.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354557.1
COORDINATES: similar to AA sequence:RefSeq:WP_018910162.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265243.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007367422.1
bifunctional methionine sulfoxide reductase B/A protein
COORDINATES: similar to AA sequence:RefSeq:WP_004359879.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_013672025.1
COORDINATES: similar to AA sequence:RefSeq:WP_007367358.1
COORDINATES: similar to AA sequence:RefSeq:WP_014708819.1
COORDINATES: similar to AA sequence:RefSeq:WP_013672022.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265545.1
COORDINATES: similar to AA sequence:RefSeq:WP_007366542.1
COORDINATES: similar to AA sequence:RefSeq:WP_009434991.1
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_018910116.1
COORDINATES: similar to AA sequence:RefSeq:WP_004382101.1
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013671235.1
COORDINATES: similar to AA sequence:RefSeq:WP_009435076.1
COORDINATES: similar to AA sequence:RefSeq:WP_006044969.1
COORDINATES: similar to AA sequence:RefSeq:WP_004382105.1
GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO:0006231 - dTMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013671231.1
COORDINATES: similar to AA sequence:RefSeq:WP_009434986.1
COORDINATES: similar to AA sequence:RefSeq:WP_009435005.1
COORDINATES: similar to AA sequence:RefSeq:WP_004382110.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_004354175.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671429.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011186.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018920208.1
COORDINATES: similar to AA sequence:RefSeq:WP_009434680.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011982.1
COORDINATES: protein motif:HMM:TIGR03296.1
COORDINATES: similar to AA sequence:RefSeq:WP_004360867.1
COORDINATES: similar to AA sequence:RefSeq:WP_004382005.1
COORDINATES: similar to AA sequence:RefSeq:WP_004340977.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008823167.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006255628.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911544.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0009063 - cellular amino acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009435854.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361183.1
COORDINATES: similar to AA sequence:RefSeq:WP_013264789.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361186.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354211.1
COORDINATES: similar to AA sequence:RefSeq:WP_004381897.1
COORDINATES: similar to AA sequence:RefSeq:WP_018463568.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004381900.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004352407.1
COORDINATES: similar to AA sequence:RefSeq:WP_004336995.1
COORDINATES: similar to AA sequence:RefSeq:WP_013672114.1
COORDINATES: similar to AA sequence:RefSeq:WP_009435637.1
COORDINATES: similar to AA sequence:RefSeq:WP_008450409.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354354.1
COORDINATES: similar to AA sequence:RefSeq:WP_004337886.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265655.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004354373.1
COORDINATES: similar to AA sequence:RefSeq:WP_019036254.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004363281.1
COORDINATES: similar to AA sequence:RefSeq:WP_007368859.1
COORDINATES: similar to AA sequence:RefSeq:WP_004352464.1
COORDINATES: similar to AA sequence:RefSeq:WP_004381656.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007368794.1
COORDINATES: similar to AA sequence:RefSeq:WP_004352436.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009435615.1
COORDINATES: similar to AA sequence:RefSeq:WP_006846852.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265439.1
COORDINATES: similar to AA sequence:RefSeq:WP_007368789.1
COORDINATES: similar to AA sequence:RefSeq:WP_004340797.1
COORDINATES: similar to AA sequence:RefSeq:WP_004371066.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671069.1
COORDINATES: similar to AA sequence:RefSeq:WP_009010352.1
COORDINATES: similar to AA sequence:RefSeq:WP_004352923.1
COORDINATES: similar to AA sequence:RefSeq:WP_009010350.1
COORDINATES: similar to AA sequence:RefSeq:WP_014710213.1
COORDINATES: similar to AA sequence:RefSeq:WP_004359599.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004359600.1
class I SAM-dependent rRNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007366454.1
COORDINATES: similar to AA sequence:RefSeq:WP_013672141.1
COORDINATES: similar to AA sequence:RefSeq:WP_009012131.1
LolA-like putative outer membrane lipoprotein chaperone
COORDINATES: protein motif:HMM:NF039827.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265861.1
GO:0015558 - secondary active p-aminobenzoyl-glutamate transmembrane transporter activity [Evidence IEA]
GO:1902604 - p-aminobenzoyl-glutamate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004360606.1
COORDINATES: similar to AA sequence:RefSeq:WP_009435580.1
COORDINATES: similar to AA sequence:RefSeq:WP_004336606.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013265309.1
COORDINATES: similar to AA sequence:RefSeq:WP_004383197.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011422.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011423.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011424.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011425.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011426.1
COORDINATES: similar to AA sequence:RefSeq:WP_013264414.1
COORDINATES: similar to AA sequence:RefSeq:WP_005935575.1
COORDINATES: similar to AA sequence:RefSeq:WP_018910657.1
HipA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018910656.1
COORDINATES: similar to AA sequence:RefSeq:WP_004361098.1
COORDINATES: similar to AA sequence:RefSeq:WP_004383163.1
GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_018911276.1
GO:0016836 - hydro-lyase activity [Evidence IEA]; GO:0008759 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]; GO:0009245 - lipid A biosynthetic process [Evidence IEA]
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_004354356.1
GO:0008780 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004361094.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: similar to AA sequence:RefSeq:WP_013670312.1
COORDINATES: similar to AA sequence:RefSeq:WP_013670313.1
COORDINATES: similar to AA sequence:RefSeq:WP_007367459.1
COORDINATES: similar to AA sequence:RefSeq:WP_009010339.1
COORDINATES: similar to AA sequence:RefSeq:WP_009010340.1
COORDINATES: similar to AA sequence:RefSeq:WP_004353879.1
COORDINATES: similar to AA sequence:RefSeq:WP_008823247.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018910489.1
GO:0032977 - membrane insertase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009012883.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671760.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265505.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911246.1
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009435808.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265632.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004381790.1
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018910170.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671049.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018910525.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265174.1
COORDINATES: similar to AA sequence:RefSeq:WP_007368846.1
COORDINATES: similar to AA sequence:RefSeq:WP_004381610.1
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004352762.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011760.1
GO:0003871 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
COORDINATES: protein motif:HMM:NF012422.2
COORDINATES: protein motif:HMM:NF013739.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005843875.1
COORDINATES: protein motif:HMM:NF025312.2
COORDINATES: similar to AA sequence:RefSeq:WP_009012205.1
COORDINATES: similar to AA sequence:RefSeq:WP_006254141.1
COORDINATES: similar to AA sequence:RefSeq:WP_014710331.1
COORDINATES: similar to AA sequence:RefSeq:WP_009012879.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265441.1
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: similar to AA sequence:RefSeq:WP_004383038.1
COORDINATES: similar to AA sequence:RefSeq:WP_019968944.1
FN3 domain-containing metallophosphoesterase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009230797.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007575565.1
glycoside hydrolase family 2 TIM barrel-domain containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007575569.1
GO:0019867 - outer membrane [Evidence IEA]
GO:2001070 - starch binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007575571.1
COORDINATES: similar to AA sequence:RefSeq:WP_007575573.1
COORDINATES: similar to AA sequence:RefSeq:WP_019968630.1
COORDINATES: similar to AA sequence:RefSeq:WP_007575575.1
COORDINATES: similar to AA sequence:RefSeq:WP_009230805.1
COORDINATES: similar to AA sequence:RefSeq:WP_007575598.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004364770.1
COORDINATES: similar to AA sequence:RefSeq:WP_018909976.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018909977.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: similar to AA sequence:RefSeq:WP_018909979.1
COORDINATES: similar to AA sequence:RefSeq:WP_004383423.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354247.1
COORDINATES: similar to AA sequence:RefSeq:WP_004370701.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_007847574.1
COORDINATES: protein motif:HMM:NF026626.2
COORDINATES: similar to AA sequence:RefSeq:WP_006043836.1
COORDINATES: similar to AA sequence:RefSeq:WP_005845119.1
type II toxin-antitoxin system YafQ family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_008824370.1
COORDINATES: similar to AA sequence:RefSeq:WP_004365008.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007173307.1
COORDINATES: similar to AA sequence:RefSeq:WP_008823302.1
COORDINATES: protein motif:HMM:NF024919.2
COORDINATES: protein motif:HMM:NF014385.2
COORDINATES: protein motif:HMM:NF021059.2
COORDINATES: protein motif:HMM:NF024829.2
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: protein motif:HMM:NF033644.1
UpxY family transcription antiterminator
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009228962.1
COORDINATES: similar to AA sequence:RefSeq:WP_004346348.1
COORDINATES: similar to AA sequence:RefSeq:WP_009434709.1
COORDINATES: similar to AA sequence:RefSeq:WP_004342559.1
COORDINATES: similar to AA sequence:RefSeq:WP_004352581.1
COORDINATES: similar to AA sequence:RefSeq:WP_004374655.1
COORDINATES: similar to AA sequence:RefSeq:WP_004359303.1
COORDINATES: similar to AA sequence:RefSeq:WP_006256403.1
COORDINATES: similar to AA sequence:RefSeq:WP_018968433.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911225.1
COORDINATES: protein motif:HMM:NF012895.2
COORDINATES: similar to AA sequence:RefSeq:WP_009236096.1
COORDINATES: similar to AA sequence:RefSeq:WP_018362582.1
COORDINATES: similar to AA sequence:RefSeq:WP_018967473.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911597.1
COORDINATES: similar to AA sequence:RefSeq:WP_008824327.1
COORDINATES: similar to AA sequence:RefSeq:WP_007135757.1
COORDINATES: similar to AA sequence:RefSeq:WP_005847756.1
COORDINATES: similar to AA sequence:RefSeq:WP_004348173.1
COORDINATES: similar to AA sequence:RefSeq:WP_008124181.1
COORDINATES: similar to AA sequence:RefSeq:WP_004380969.1
COORDINATES: similar to AA sequence:RefSeq:WP_008823896.1
COORDINATES: similar to AA sequence:RefSeq:WP_004308773.1
COORDINATES: similar to AA sequence:RefSeq:WP_018358727.1
PDDEXK nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018358728.1
COORDINATES: similar to AA sequence:RefSeq:WP_004384074.1
COORDINATES: similar to AA sequence:RefSeq:WP_009435689.1
relaxase/mobilization nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004336065.1
plasmid mobilization relaxosome protein MobC
COORDINATES: similar to AA sequence:RefSeq:WP_005845937.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911491.1
COORDINATES: similar to AA sequence:RefSeq:WP_004352487.1
COORDINATES: similar to AA sequence:RefSeq:WP_005845940.1
COORDINATES: similar to AA sequence:RefSeq:WP_018463922.1
COORDINATES: similar to AA sequence:RefSeq:WP_007133670.1
COORDINATES: similar to AA sequence:RefSeq:WP_006952869.1
GO:0015486 - glycoside-pentoside-hexuronide:cation symporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0006812 - cation transport [Evidence IEA]
glycoside-pentoside-hexuronide (GPH):cation symporter
COORDINATES: similar to AA sequence:RefSeq:WP_004384724.1
COORDINATES: similar to AA sequence:RefSeq:WP_018464763.1
COORDINATES: similar to AA sequence:RefSeq:WP_009237558.1
COORDINATES: similar to AA sequence:RefSeq:WP_009161132.1
GO:0030246 - carbohydrate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006950654.1
COORDINATES: similar to AA sequence:RefSeq:WP_004351553.1
COORDINATES: similar to AA sequence:RefSeq:WP_005796123.1
COORDINATES: similar to AA sequence:RefSeq:WP_009161136.1
COORDINATES: similar to AA sequence:RefSeq:WP_009161137.1
COORDINATES: similar to AA sequence:RefSeq:WP_014709735.1
COORDINATES: similar to AA sequence:RefSeq:WP_004384066.1
COORDINATES: similar to AA sequence:RefSeq:WP_008824296.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671971.1
COORDINATES: similar to AA sequence:RefSeq:WP_004375824.1
COORDINATES: similar to AA sequence:RefSeq:WP_004367621.1
type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008824292.1
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004377619.1
helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004331551.1
COORDINATES: similar to AA sequence:RefSeq:WP_009434238.1
COORDINATES: similar to AA sequence:RefSeq:WP_007367188.1
COORDINATES: similar to AA sequence:RefSeq:WP_006948337.1
COORDINATES: similar to AA sequence:RefSeq:WP_006948333.1
COORDINATES: similar to AA sequence:RefSeq:WP_006948332.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911443.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005682088.1
COORDINATES: similar to AA sequence:RefSeq:WP_018362636.1
COORDINATES: similar to AA sequence:RefSeq:WP_004311123.1
COORDINATES: similar to AA sequence:RefSeq:WP_009237462.1
COORDINATES: similar to AA sequence:RefSeq:WP_018362632.1
COORDINATES: similar to AA sequence:RefSeq:WP_018362631.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005682081.1
COORDINATES: similar to AA sequence:RefSeq:WP_004364409.1
COORDINATES: similar to AA sequence:RefSeq:WP_006045120.1
COORDINATES: similar to AA sequence:RefSeq:WP_004353640.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671072.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671073.1
COORDINATES: similar to AA sequence:RefSeq:WP_007572575.1
COORDINATES: similar to AA sequence:RefSeq:WP_007572573.1
COORDINATES: similar to AA sequence:RefSeq:WP_008823934.1
glycoside hydrolase family 97 catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007572569.1
COORDINATES: similar to AA sequence:RefSeq:WP_007572567.1
BspA family leucine-rich repeat surface protein
COORDINATES: similar to AA sequence:RefSeq:WP_007572565.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671080.1
COORDINATES: similar to AA sequence:RefSeq:WP_007572561.1
COORDINATES: similar to AA sequence:RefSeq:WP_007572559.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02937.1
COORDINATES: similar to AA sequence:RefSeq:WP_004351019.1
COORDINATES: similar to AA sequence:RefSeq:WP_004342109.1
outer membrane lipoprotein-sorting protein
COORDINATES: similar to AA sequence:RefSeq:WP_004374781.1
COORDINATES: similar to AA sequence:RefSeq:WP_008823920.1
COORDINATES: protein motif:HMM:NF013777.2
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: similar to AA sequence:RefSeq:WP_004336024.1
COORDINATES: similar to AA sequence:RefSeq:WP_004365249.1
COORDINATES: similar to AA sequence:RefSeq:WP_006256588.1
COORDINATES: similar to AA sequence:RefSeq:WP_008124758.1
COORDINATES: similar to AA sequence:RefSeq:WP_008124756.1
COORDINATES: similar to AA sequence:RefSeq:WP_008823913.1
COORDINATES: similar to AA sequence:RefSeq:WP_004378854.1
COORDINATES: similar to AA sequence:RefSeq:WP_004348188.1
GO:0032991 - protein-containing complex [Evidence IEA]
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0032196 - transposition [Evidence IEA]
TraG family conjugative transposon ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_013265848.1
COORDINATES: similar to AA sequence:RefSeq:WP_009434717.1
COORDINATES: similar to AA sequence:RefSeq:WP_018968335.1
COORDINATES: similar to AA sequence:RefSeq:WP_018362584.1
COORDINATES: similar to AA sequence:RefSeq:WP_004353768.1
COORDINATES: similar to AA sequence:RefSeq:WP_004365010.1
COORDINATES: similar to AA sequence:RefSeq:WP_004343790.1
COORDINATES: similar to AA sequence:RefSeq:WP_009227183.1
COORDINATES: similar to AA sequence:RefSeq:WP_004348168.1
COORDINATES: similar to AA sequence:RefSeq:WP_009227185.1
COORDINATES: similar to AA sequence:RefSeq:WP_009012084.1
COORDINATES: similar to AA sequence:RefSeq:WP_018910043.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]
GO:0008216 - spermidine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004382079.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265394.1
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013671251.1
DUF5686 and carboxypeptidase-like regulatory domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013671250.1
COORDINATES: similar to AA sequence:RefSeq:WP_004382071.1
COORDINATES: similar to AA sequence:RefSeq:WP_007367432.1
COORDINATES: similar to AA sequence:RefSeq:WP_009010236.1
COORDINATES: similar to AA sequence:RefSeq:WP_009010235.1
COORDINATES: similar to AA sequence:RefSeq:WP_004351483.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265687.1
COORDINATES: similar to AA sequence:RefSeq:WP_004381863.1
COORDINATES: similar to AA sequence:RefSeq:WP_004357321.1
COORDINATES: similar to AA sequence:RefSeq:WP_004381866.1
COORDINATES: similar to AA sequence:RefSeq:WP_008566266.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018919187.1
COORDINATES: similar to AA sequence:RefSeq:WP_010955913.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011800.1
class I adenylate-forming enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004374122.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011798.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011797.1
COORDINATES: similar to AA sequence:RefSeq:WP_004353733.1
GO:0016746 - acyltransferase activity [Evidence IEA]
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009011795.1
COORDINATES: similar to AA sequence:RefSeq:WP_004380769.1
COORDINATES: similar to AA sequence:RefSeq:WP_008823864.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011792.1
COORDINATES: similar to AA sequence:RefSeq:WP_008823861.1
COORDINATES: similar to AA sequence:RefSeq:WP_008823860.1
COORDINATES: similar to AA sequence:RefSeq:WP_008823859.1
outer membrane lipoprotein carrier protein LolA
COORDINATES: similar to AA sequence:RefSeq:WP_004374110.1
COORDINATES: similar to AA sequence:RefSeq:WP_004378537.1
beta-ketoacyl-[acyl-carrier-protein] synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009011787.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671890.1
beta-ketoacyl synthase N-terminal-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009011785.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671888.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011783.1
COORDINATES: similar to AA sequence:RefSeq:WP_008446605.1
COORDINATES: similar to AA sequence:RefSeq:WP_004374096.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011781.1
COORDINATES: similar to AA sequence:RefSeq:WP_004374092.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011779.1
COORDINATES: similar to AA sequence:RefSeq:WP_013671884.1
COORDINATES: similar to AA sequence:RefSeq:WP_018920766.1
COORDINATES: similar to AA sequence:RefSeq:WP_018911135.1
COORDINATES: similar to AA sequence:RefSeq:WP_004380188.1
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_004366501.1
COORDINATES: similar to AA sequence:RefSeq:WP_009011387.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_018462399.1
COORDINATES: similar to AA sequence:RefSeq:WP_014710333.1
COORDINATES: similar to AA sequence:RefSeq:WP_005866995.1
COORDINATES: similar to AA sequence:RefSeq:WP_015310444.1
COORDINATES: similar to AA sequence:RefSeq:WP_018357970.1
COORDINATES: similar to AA sequence:RefSeq:WP_004359650.1
DUF1735 and LamG domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004377637.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265381.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265872.1
COORDINATES: similar to AA sequence:RefSeq:WP_009010570.1
COORDINATES: similar to AA sequence:RefSeq:WP_004362842.1
COORDINATES: similar to AA sequence:RefSeq:WP_007366709.1
COORDINATES: similar to AA sequence:RefSeq:WP_013265162.1
translocation/assembly module TamB domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004362013.1
COORDINATES: similar to AA sequence:RefSeq:WP_006044533.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354523.1
COORDINATES: similar to AA sequence:RefSeq:WP_004360890.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009274875.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009011895.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004357252.1
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004352219.1
COORDINATES: similar to AA sequence:RefSeq:WP_007368608.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_007368609.1
polysaccharide biosynthesis/export family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008823806.1
COORDINATES: similar to AA sequence:RefSeq:WP_004354290.1
COORDINATES: similar to AA sequence:RefSeq:WP_004381888.1
COORDINATES: similar to AA sequence:RefSeq:WP_009013301.1
COORDINATES: similar to AA sequence:RefSeq:WP_009010279.1
D-Ala-D-Ala carboxypeptidase family metallohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_004381692.1
COORDINATES: similar to AA sequence:RefSeq:WP_015310466.1
COORDINATES: similar to AA sequence:RefSeq:WP_004381741.1
GO:0008199 - ferric iron binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004351445.1
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_013265275.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013672177.1
GO:0004067 - asparaginase activity [Evidence IEA]
GO:0006520 - cellular amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009012771.1
COORDINATES: similar to AA sequence:RefSeq:WP_018910905.1