Halogeometricum borinquense DSM 11551 plasmid pHBOR01, complete sequence.
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.
The complete plasmid1 of Halogeometricum borinquense DSM 11551
Submitted (10-AUG-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP001691.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4082733\nSource DNA and organism available from Hans-Peter Klenk at the\nGerman Collection of Microorganisms and Cell Cultures (DSMZ)\n(hans-peter.klenk@dsmz.de)\nContacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)\n David Bruce (microbe@cuba.jgi-psf.org)\nWhole genome sequencing and draft assembly at JGI-PGF\nFinishing done by JGI-LANL\nAnnotation by JGI-ORNL and JGI-PGF\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Metadata-START##\nOrganism Display Name :: Halogeometricum borinquense PR3, DSM 11551\nCulture Collection ID :: DSM 11551, ATCC 700274, JCM 10706\nGOLD Stamp ID :: Gc01108\nFunding Program :: DOE-GEBA 2007\nNumber of Reads :: 2826 Sanger\nAssembly Method :: Newbler, PGA\nSequencing Depth :: 9.7x Sanger; 21.8x 454\nGene Calling Method :: GeneMark, GenePRIMP\nIsolation Site :: Solar salterns of Cabo Rojo Puerto Rico\nIsolation Country :: Puerto Rico\nLatitude :: 18.088189\nLongitude :: -67.147095\nOxygen Requirement :: Aerobe\nCell Shape :: Pleomorphic-shaped\nMotility :: Motile\nSporulation :: Nonsporulating\nTemperature Range :: Mesophile\nTemperature Optimum :: 40C\nSalinity :: Halophile\nGram Staining :: gram-\nBiotic Relationship :: Free living\nDiseases :: None\nHabitat :: Solar saltern\n##Metadata-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/24/2023 13:46:31\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,929\nCDSs (total) :: 3,869\nGenes (coding) :: 3,822\nCDSs (with protein) :: 3,822\nGenes (RNA) :: 60\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 52\nncRNAs :: 2\nPseudo Genes (total) :: 47\nCDSs (without protein) :: 47\nPseudo Genes (ambiguous residues) :: 0 of 47\nPseudo Genes (frameshifted) :: 27 of 47\nPseudo Genes (incomplete) :: 26 of 47\nPseudo Genes (internal stop) :: 11 of 47\nPseudo Genes (multiple problems) :: 14 of 47\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Halogeometricum borinquense
COORDINATES: similar to AA sequence:RefSeq:WP_006056123.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006056122.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_013440732.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004060582.1
GO:0004803 - transposase activity [Evidence IEA]
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006056120.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056119.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056118.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056117.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056116.1
COORDINATES: similar to AA sequence:RefSeq:WP_008321929.1
COORDINATES: similar to AA sequence:RefSeq:WP_008526059.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014862861.1
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: similar to AA sequence:RefSeq:WP_006056109.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056108.1
COORDINATES: similar to AA sequence:RefSeq:WP_015408669.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004056430.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056104.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056103.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056102.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_014864604.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056100.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006056099.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056098.1
poly(R)-hydroxyalkanoic acid synthase subunit PhaE
COORDINATES: similar to AA sequence:RefSeq:WP_006056097.1
class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC
COORDINATES: similar to AA sequence:RefSeq:WP_006056096.1
COORDINATES: protein motif:HMM:NF024844.2
COORDINATES: similar to AA sequence:RefSeq:WP_006056093.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056092.1
COORDINATES: similar to AA sequence:RefSeq:WP_013880266.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013880200.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056089.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056088.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006056087.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056086.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056085.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056084.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006056083.1
COORDINATES: similar to AA sequence:RefSeq:WP_014050953.1
COORDINATES: similar to AA sequence:RefSeq:WP_006671487.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056081.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056080.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056079.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056078.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056077.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006056076.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061086.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056074.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056073.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056072.1
COORDINATES: similar to AA sequence:RefSeq:WP_007543934.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056070.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056069.1
COORDINATES: similar to AA sequence:RefSeq:WP_008319496.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056066.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056065.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056064.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041677.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006056062.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004597025.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006056060.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041008.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0050151 - oleate hydratase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006056058.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056057.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006056056.1
COORDINATES: similar to AA sequence:RefSeq:WP_014555899.1
COORDINATES: similar to AA sequence:RefSeq:WP_006650787.1
MaoC family dehydratase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006056053.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
BlaI/MecI/CopY family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006056052.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
plastocyanin/azurin family copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006056051.1
GO:0050304 - nitrous-oxide reductase activity [Evidence IEA]
GO:0019333 - denitrification pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006056050.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056049.1
GO:0071941 - nitrogen cycle metabolic process [Evidence IEA]
nitrous oxide reductase family maturation protein NosD
COORDINATES: similar to AA sequence:RefSeq:WP_006056048.1
COORDINATES: similar to AA sequence:RefSeq:WP_008586773.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056046.1
COORDINATES: similar to AA sequence:RefSeq:WP_004060670.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056044.1
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_007109271.1
COORDINATES: similar to AA sequence:RefSeq:WP_011223956.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006056042.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188721.1
GO:0004474 - malate synthase activity [Evidence IEA]
GO:0006097 - glyoxylate cycle [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007188722.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056039.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097104.1
GO:0050334 - thiaminase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006056037.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056036.1
COORDINATES: similar to AA sequence:RefSeq:WP_017342098.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056033.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056032.1
COORDINATES: similar to AA sequence:RefSeq:WP_006184652.1
GO:0008452 - RNA ligase activity [Evidence IEA]
GO:0016070 - RNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005580815.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056029.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006056028.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056027.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056026.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056025.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006056023.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056022.1
COORDINATES: similar to AA sequence:RefSeq:WP_009761927.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056020.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056019.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056018.1
COORDINATES: similar to AA sequence:RefSeq:WP_018257086.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056015.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: similar to AA sequence:RefSeq:WP_006056014.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056013.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056012.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056011.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006056010.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983178.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056008.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056007.1
b(o/a)3-type cytochrome-c oxidase subunit 1
COORDINATES: similar to AA sequence:RefSeq:WP_007274787.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056005.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056004.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056003.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056002.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006056001.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056000.1
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006055999.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055998.1
COORDINATES: similar to AA sequence:RefSeq:WP_004056427.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055996.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055995.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055994.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055993.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055992.1
COORDINATES: similar to AA sequence:RefSeq:WP_007742410.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055990.1
COORDINATES: similar to AA sequence:RefSeq:WP_008001060.1
orc1/cdc6 family replication initiation protein
COORDINATES: similar to AA sequence:RefSeq:WP_006055885.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016625 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor [Evidence IEA]
aldehyde ferredoxin oxidoreductase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006055886.1
COORDINATES: similar to AA sequence:RefSeq:WP_012289661.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055888.1
COORDINATES: similar to AA sequence:RefSeq:WP_012289659.1
COORDINATES: similar to AA sequence:RefSeq:WP_007702761.1
PQQ-binding-like beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_006055891.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055892.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055893.1
COORDINATES: protein motif:HMM:NF012610.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006055895.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055896.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055898.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055899.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693259.1
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: similar to AA sequence:RefSeq:WP_006055903.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055904.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055905.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055906.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055907.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055908.1
COORDINATES: similar to AA sequence:RefSeq:WP_008095939.1
COORDINATES: similar to AA sequence:RefSeq:WP_004975711.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0000272 - polysaccharide catabolic process [Evidence IEA]
dockerin type I domain-containing protein
COORDINATES: protein motif:HMM:NF037753.2
PGF-CTERM sorting domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006055912.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055913.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055914.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055915.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055916.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055917.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055918.1
COORDINATES: similar to AA sequence:RefSeq:WP_008386016.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055920.1
COORDINATES: similar to AA sequence:RefSeq:WP_008096083.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055922.1
COORDINATES: similar to AA sequence:RefSeq:WP_007541079.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055924.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055925.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006055926.1
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004041942.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055928.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013446585.1
dTDP-4-dehydrorhamnose 3,5-epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006055930.1
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006055932.1
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: similar to AA sequence:RefSeq:WP_006055935.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055936.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055937.1
COORDINATES: similar to AA sequence:RefSeq:WP_008003903.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase AglF
COORDINATES: similar to AA sequence:RefSeq:WP_006055939.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055940.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004056787.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009761421.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006055943.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055944.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055945.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055946.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006055947.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055948.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055949.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055950.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055951.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055952.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055953.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055954.1
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: similar to AA sequence:RefSeq:WP_006055956.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055957.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055958.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055959.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055960.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055961.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055962.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055963.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055964.1
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006055965.1
COORDINATES: similar to AA sequence:RefSeq:WP_012807485.1
metal ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006055967.1
metal ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012807487.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055969.1
metal-dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008452609.1
COORDINATES: similar to AA sequence:RefSeq:WP_007976264.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055972.1
COORDINATES: similar to AA sequence:RefSeq:WP_007976260.1
CmpA/NrtA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006055974.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055975.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055976.1
GO:0005515 - protein binding [Evidence IEA]
GAF domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_006055978.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055979.1
bacterio-opsin activator domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004040813.1
COORDINATES: similar to AA sequence:RefSeq:WP_007276452.1
COORDINATES: protein motif:HMM:NF012875.2
COORDINATES: similar to AA sequence:RefSeq:WP_011225053.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
phage integrase SAM-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006055984.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055985.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966791.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055987.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055988.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055989.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056193.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056192.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056190.1
COORDINATES: similar to AA sequence:RefSeq:WP_004063209.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056188.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056187.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056186.1
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006056185.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056184.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056183.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006056182.1
COORDINATES: similar to AA sequence:RefSeq:WP_008320434.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188487.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056179.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056178.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056176.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056175.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056174.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006056172.1
COORDINATES: similar to AA sequence:RefSeq:WP_009375035.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056170.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056169.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056168.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056167.1
GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008388190.1
hydantoinase B/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006600970.1
hydantoinase/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004064384.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572194.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056162.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056161.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056160.1
COORDINATES: similar to AA sequence:RefSeq:WP_012289625.1
COORDINATES: similar to AA sequence:RefSeq:WP_004056697.1
COORDINATES: similar to AA sequence:RefSeq:WP_004056698.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890526.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056155.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056154.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056153.1
COORDINATES: similar to AA sequence:RefSeq:WP_004056703.1
COORDINATES: similar to AA sequence:RefSeq:WP_004056704.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006056150.1
COORDINATES: similar to AA sequence:RefSeq:WP_004056706.1
There are 14 genes on the gvp gene cluster in halophilic archaea. The product of gvpA is a structural component of gas vesicles, which provide buoyancy to cells and promote flotation. It has been reported that the products of gvpAO and gvpFGJKLM represent the minimal set required for gas vesicle formation in halophilic archaea; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004056707.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004056708.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0031412 - gas vesicle organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004056709.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056145.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006056144.1
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056142.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006056141.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056140.1
COORDINATES: similar to AA sequence:RefSeq:WP_008096310.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056138.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056137.1
GO:0005384 - manganese ion transmembrane transporter activity [Evidence IEA]
GO:0030026 - cellular manganese ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007190508.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056135.1
COORDINATES: similar to AA sequence:RefSeq:WP_006109147.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006663735.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056132.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056131.1
GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006056130.1
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_013878793.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945131.1
GO:0015074 - DNA integration [Evidence IEA]
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004595756.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667560.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056124.1