Erwinia tasmaniensis Et1/99 plasmid pET35, complete sequence.
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Erwiniaceae; Erwinia.
The genome of Erwinia tasmaniensis strain Et1/99, a non-pathogenic bacterium in the genus Erwinia
Submitted (27-AUG-2007) Max Planck Institute for Molecular Genetics, proScience Ihnestrasse 73, D-14195 Berlin, Germany
REFSEQ INFORMATION: The reference sequence is identical to\nCU468130.1.\nThis project was carried out by\n*Max Planck Institute for Molecular Genetics, Berlin, Germany\n (principle investigator);\n*Julius Kuehn Institute for Plant Protection in Fruit Crops and\n Viticulture, Dossenheim, Germany\n-------------- Genome Center\n Center: Max Planck Institute for Molecular Genetics\n Center code: MPIMG\n--------------.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/24/2022 02:11:33\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,784\nCDSs (total) :: 3,667\nGenes (coding) :: 3,584\nCDSs (with protein) :: 3,584\nGenes (RNA) :: 117\nrRNAs :: 8, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 7, 7 (5S, 16S, 23S)\ntRNAs :: 81\nncRNAs :: 14\nPseudo Genes (total) :: 83\nCDSs (without protein) :: 83\nPseudo Genes (ambiguous residues) :: 0 of 83\nPseudo Genes (frameshifted) :: 40 of 83\nPseudo Genes (incomplete) :: 52 of 83\nPseudo Genes (internal stop) :: 25 of 83\nPseudo Genes (multiple problems) :: 29 of 83\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_014710721.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_000288043.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006882106.1
COORDINATES: similar to AA sequence:RefSeq:WP_000241899.1
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_001172952.1
COORDINATES: similar to AA sequence:RefSeq:WP_000796685.1
COORDINATES: similar to AA sequence:RefSeq:WP_006882102.1
VirB4 family type IV secretion system protein
COORDINATES: similar to AA sequence:RefSeq:WP_006882099.1
COORDINATES: similar to AA sequence:RefSeq:WP_001128573.1
COORDINATES: similar to AA sequence:RefSeq:WP_000476773.1
COORDINATES: similar to AA sequence:RefSeq:WP_000722128.1
TrbG/VirB9 family P-type conjugative transfer protein
COORDINATES: similar to AA sequence:RefSeq:WP_006882093.1
COORDINATES: similar to AA sequence:RefSeq:WP_012443214.1
GO:0043684 - type IV secretion system complex [Evidence IEA]
GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001177101.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000849236.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_001401683.1
COORDINATES: similar to AA sequence:RefSeq:WP_001243650.1
COORDINATES: similar to AA sequence:RefSeq:WP_006882087.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000004210.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
H-NS family nucleoid-associated regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_014710726.1
COORDINATES: similar to AA sequence:RefSeq:WP_012443180.1
COORDINATES: similar to AA sequence:RefSeq:WP_000847771.1
COORDINATES: similar to AA sequence:RefSeq:WP_001148152.1
COORDINATES: similar to AA sequence:RefSeq:WP_008786869.1
COORDINATES: similar to AA sequence:RefSeq:WP_001018983.1
ribbon-helix-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000376639.1
COORDINATES: similar to AA sequence:RefSeq:WP_001051252.1
COORDINATES: similar to AA sequence:RefSeq:WP_006882065.1
COORDINATES: similar to AA sequence:RefSeq:WP_006882064.1
COORDINATES: similar to AA sequence:RefSeq:WP_014710735.1
COORDINATES: similar to AA sequence:RefSeq:WP_006882053.1
COORDINATES: similar to AA sequence:RefSeq:WP_006882049.1
COORDINATES: similar to AA sequence:RefSeq:WP_000785685.1
COORDINATES: similar to AA sequence:RefSeq:WP_000421118.1
COORDINATES: similar to AA sequence:RefSeq:WP_000570802.1