Acinetobacter septicus strain FDAARGOS_1401 plasmid unnamed, complete sequence.
Bacteria; Proteobacteria; Gammaproteobacteria; Moraxellales; Moraxellaceae; Acinetobacter.
FDA dAtabase for Regulatory Grade micrObial Sequences (FDA-ARGOS): Supporting development and validation of Infectious Disease Dx tests
Submitted (19-JUL-2021) Center for Devices and Radiological Health, US Food and Drug Administration, 10903 New Hampshire Avenue, White Oak, MD 20903, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP079899.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: canu v. 2.1.1\nGenome Coverage :: 8955.93x\nSequencing Technology :: Pacbio; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/02/2022 03:48:46\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,667\nCDSs (total) :: 3,569\nGenes (coding) :: 3,476\nCDSs (with protein) :: 3,476\nGenes (RNA) :: 98\nrRNAs :: 7, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 7, 7 (5S, 16S, 23S)\ntRNAs :: 73\nncRNAs :: 4\nPseudo Genes (total) :: 93\nCDSs (without protein) :: 93\nPseudo Genes (ambiguous residues) :: 0 of 93\nPseudo Genes (frameshifted) :: 30 of 93\nPseudo Genes (incomplete) :: 66 of 93\nPseudo Genes (internal stop) :: 22 of 93\nPseudo Genes (multiple problems) :: 22 of 93\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_005006219.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005006218.1
nuclease-related domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005006216.1
COORDINATES: similar to AA sequence:RefSeq:WP_004895603.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006214.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006211.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006210.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006208.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006206.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028471.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006204.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028476.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF020305.2
TnsA endonuclease N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_032072965.1
GO:0004803 - transposase activity [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF039990.1
DcaP family trimeric outer membrane transporter
COORDINATES: similar to AA sequence:RefSeq:YP_004994878.1
glutathione-dependent formaldehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_000742756.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004779992.1
COORDINATES: similar to AA sequence:RefSeq:WP_000241027.1
COORDINATES: similar to AA sequence:RefSeq:WP_000376303.1
GO:0018738 - S-formylglutathione hydrolase activity [Evidence IEA]
GO:0046292 - formaldehyde metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000657000.1
COORDINATES: similar to AA sequence:RefSeq:WP_001289504.1
GO:0051907 - S-(hydroxymethyl)glutathione synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_308438.1
GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0051903 - S-(hydroxymethyl)glutathione dehydrogenase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0009404 - toxin metabolic process [Evidence IEA]
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_007182548.1
formaldehyde-responsive transcriptional repressor FrmR
COORDINATES: similar to AA sequence:RefSeq:WP_005006185.1
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000051649.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004647088.1
COORDINATES: similar to AA sequence:RefSeq:YP_004995086.1
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_004773073.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611607.1
COORDINATES: protein motif:HMM:NF014624.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001120095.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009518266.1
COORDINATES: similar to AA sequence:RefSeq:WP_000939241.1
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: similar to AA sequence:RefSeq:WP_076612090.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01497
AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_005028481.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028487.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006163.1
COORDINATES: similar to AA sequence:RefSeq:WP_010591044.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006161.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028493.1
COORDINATES: similar to AA sequence:RefSeq:WP_005399445.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006153.1
class I SAM-dependent DNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010699980.1
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000249786.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006147.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010699982.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006143.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006141.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028500.1
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005006134.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028504.1
COORDINATES: similar to AA sequence:RefSeq:WP_010591043.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006125.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006124.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028510.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028512.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028513.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006110.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006108.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028515.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006104.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006100.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028518.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028520.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006087.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006085.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006083.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006080.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006077.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028524.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006075.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028529.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006071.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006069.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006063.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006061.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006057.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006055.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006052.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028536.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006049.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028541.1
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005006045.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006043.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006040.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006038.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028546.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006032.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028567.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006029.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006026.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006024.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006022.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006021.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006020.1
translesion error-prone DNA polymerase V autoproteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005006018.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006017.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005006014.1
IS5-like element ISAba12 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_005230226.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0004362 - glutathione-disulfide reductase (NADPH) activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0006749 - glutathione metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611942.1
programmed frameshift; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS3-like element ISAba22 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_017699129.1
IS21-like element ISPst3 family helper ATPase IstB
COORDINATES: similar to AA sequence:RefSeq:WP_076612069.1
IS4-like element ISAba1 family transposase
Conserved domain frequently associated with peptide methionine sulfoxide reductase
COORDINATES: similar to AA sequence:RefSeq:WP_003044951.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: similar to AA sequence:RefSeq:WP_003464967.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_005006007.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002118270.1
magnesium and cobalt transport protein CorA
COORDINATES: similar to AA sequence:RefSeq:WP_005006003.1
COORDINATES: similar to AA sequence:RefSeq:WP_003044989.1
GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]
zinc-binding alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005006001.1
COORDINATES: similar to AA sequence:RefSeq:WP_003464978.1
Thiol-disulfide isomerase and thioredoxins
COORDINATES: similar to AA sequence:RefSeq:WP_003464979.1
COORDINATES: similar to AA sequence:RefSeq:WP_003464980.1
COORDINATES: similar to AA sequence:RefSeq:WP_002118292.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005995.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
Uncharacterized protein conserved in bacteria
COORDINATES: similar to AA sequence:RefSeq:WP_003464986.1
COORDINATES: similar to AA sequence:RefSeq:WP_003464988.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005993.1
GO:0045282 - plasma membrane succinate dehydrogenase complex [Evidence IEA]
GO:0000104 - succinate dehydrogenase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
succinate dehydrogenase, cytochrome b556 subunit
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005005990.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005987.1
COORDINATES: similar to AA sequence:RefSeq:WP_000067575.1
COORDINATES: similar to AA sequence:RefSeq:WP_001180368.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005981.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005980.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005978.1
COORDINATES: similar to AA sequence:RefSeq:WP_000856068.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005975.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005966.1
GO:0003868 - 4-hydroxyphenylpyruvate dioxygenase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006572 - tyrosine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005221153.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004981290.1
aspartate/tyrosine/aromatic aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005005960.1
COORDINATES: similar to AA sequence:RefSeq:WP_004981293.1
GO:0004334 - fumarylacetoacetase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004694626.1
GO:0016034 - maleylacetoacetate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005221137.1
COORDINATES: similar to AA sequence:RefSeq:WP_005399979.1
ArsO family NAD(P)H-dependent flavin-containing monooxygenase
COORDINATES: similar to AA sequence:RefSeq:WP_004644739.1
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019837818.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009511638.1
COORDINATES: similar to AA sequence:RefSeq:WP_004694638.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_004651277.1
GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite, after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell, providing resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005005937.1
COORDINATES: similar to AA sequence:RefSeq:WP_004694644.1
COORDINATES: similar to AA sequence:RefSeq:WP_005399986.1
COORDINATES: similar to AA sequence:RefSeq:WP_001043692.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005005933.1
COORDINATES: similar to AA sequence:RefSeq:WP_000891992.1
COORDINATES: similar to AA sequence:RefSeq:WP_000145713.1
COORDINATES: similar to AA sequence:RefSeq:WP_000633833.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005928.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005926.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005924.1
COORDINATES: similar to AA sequence:RefSeq:WP_001985060.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005919.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005918.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028615.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005914.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005912.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028617.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028620.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005904.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028625.1
DotH/IcmK family type IV secretion protein
COORDINATES: similar to AA sequence:RefSeq:WP_005005897.1
DotI/IcmL family type IV secretion protein
COORDINATES: similar to AA sequence:RefSeq:WP_005028629.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028631.1
Members of this family include DotD of type IVB secretion systems and TraH of plasmid conjugative plasmid systems, both lipoproteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005028633.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005028635.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028638.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005878.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005876.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_005028640.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005870.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028648.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028650.1
COORDINATES: similar to AA sequence:RefSeq:WP_015586042.1
COORDINATES: protein motif:HMM:NF024642.2
COORDINATES: similar to AA sequence:RefSeq:WP_004986534.1
COORDINATES: similar to AA sequence:RefSeq:WP_004757588.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004676715.1
COORDINATES: similar to AA sequence:RefSeq:WP_004981674.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005848.1
iron-containing redox enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:YP_004994773.1
COORDINATES: similar to AA sequence:RefSeq:WP_019767888.1
COORDINATES: similar to AA sequence:RefSeq:WP_005325056.1
COORDINATES: similar to AA sequence:RefSeq:WP_005257677.1
COORDINATES: similar to AA sequence:RefSeq:WP_005303715.1
COORDINATES: similar to AA sequence:RefSeq:WP_009515630.1
COORDINATES: similar to AA sequence:RefSeq:WP_004984999.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004984990.1
GO:0004805 - trehalose-phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004812228.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:YP_004994754.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004986576.1
COORDINATES: similar to AA sequence:RefSeq:WP_004638743.1
COORDINATES: similar to AA sequence:RefSeq:WP_004986579.1
COORDINATES: similar to AA sequence:RefSeq:WP_004984983.1
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: similar to AA sequence:RefSeq:WP_005028658.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005821.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005820.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005819.1
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005028665.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005815.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028668.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028669.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005810.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028671.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005808.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028673.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005806.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028675.1
COORDINATES: protein motif:HMM:NF013593.2
COORDINATES: similar to AA sequence:RefSeq:WP_005028679.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005799.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028684.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028686.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005795.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005792.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028693.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005788.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028696.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028698.1
strawberry notch C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005005782.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005780.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005779.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005776.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005773.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005771.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005767.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005764.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005760.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005759.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005757.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005756.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028393.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005752.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005750.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005749.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005748.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005747.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005746.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005745.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005744.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005743.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005742.1
COORDINATES: similar to AA sequence:RefSeq:WP_005005740.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005005738.1
COORDINATES: similar to AA sequence:RefSeq:WP_004914340.1
COORDINATES: similar to AA sequence:RefSeq:WP_005100737.1
COORDINATES: protein motif:HMM:NF033819.0
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_001094416.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005028412.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006366.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006362.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006360.1
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016656266.1
COORDINATES: similar to AA sequence:RefSeq:WP_004282172.1
COORDINATES: similar to AA sequence:RefSeq:WP_004281236.1
thiol:disulfide interchange protein DsbA/DsbL
COORDINATES: similar to AA sequence:RefSeq:WP_016658600.1
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
CDF family Co(II)/Ni(II) efflux transporter DmeF
COORDINATES: similar to AA sequence:RefSeq:WP_005006352.1
metal/formaldehyde-sensitive transcriptional repressor
COORDINATES: similar to AA sequence:RefSeq:WP_000733641.1
COORDINATES: similar to AA sequence:RefSeq:WP_004681438.1
COORDINATES: similar to AA sequence:RefSeq:WP_004733233.1
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004733231.1
COORDINATES: similar to AA sequence:RefSeq:WP_005062701.1
GO:0042597 - periplasmic space [Evidence IEA]
GO:0005507 - copper ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004281876.1
COORDINATES: similar to AA sequence:RefSeq:WP_004668316.1
COORDINATES: similar to AA sequence:RefSeq:WP_005401401.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005329301.1
heavy metal response regulator transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_005021637.1
COORDINATES: similar to AA sequence:RefSeq:WP_010589306.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]
GO:0006825 - copper ion transport [Evidence IEA]
copper resistance system multicopper oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_004695749.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0006878 - cellular copper ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005250395.1
COORDINATES: similar to AA sequence:RefSeq:WP_004691578.1
COORDINATES: similar to AA sequence:RefSeq:WP_004821787.1
GO:0015250 - water channel activity [Evidence IEA]
GO:0006833 - water transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004994453.1
COORDINATES: similar to AA sequence:RefSeq:WP_005209322.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF033587.1
COORDINATES: similar to AA sequence:RefSeq:WP_004668309.1
COORDINATES: similar to AA sequence:RefSeq:WP_001067784.1
IS6-like element IS1006 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_003653920.1
GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005265040.1
COORDINATES: similar to AA sequence:RefSeq:WP_019383542.1
COORDINATES: similar to AA sequence:RefSeq:WP_006582675.1
COORDINATES: similar to AA sequence:RefSeq:WP_019383584.1
S-4TM family putative pore-forming effector
COORDINATES: similar to AA sequence:RefSeq:WP_004773428.1
COORDINATES: similar to AA sequence:RefSeq:WP_001986494.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016658792.1
GO:0008864 - formyltetrahydrofolate deformylase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004900845.1
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: similar to AA sequence:RefSeq:WP_003173309.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016658789.1
COORDINATES: similar to AA sequence:RefSeq:WP_004939169.1
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011182550.1
COORDINATES: similar to AA sequence:RefSeq:WP_004762795.1
COORDINATES: similar to AA sequence:RefSeq:WP_004900692.1
COORDINATES: similar to AA sequence:RefSeq:WP_004900693.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016658824.1
glutamine amidotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004948533.1
COORDINATES: similar to AA sequence:RefSeq:WP_011182541.1
FMN-binding glutamate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_042893601.1
IS6-like element IS1008 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_076611584.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005006271.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028445.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006266.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006263.1
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: similar to AA sequence:RefSeq:WP_005028456.1
peptide-methionine (S)-S-oxide reductase
COORDINATES: similar to AA sequence:RefSeq:WP_000483554.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006251.1
COORDINATES: similar to AA sequence:RefSeq:WP_011711658.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006248.1
COORDINATES: similar to AA sequence:RefSeq:WP_000257537.1
COORDINATES: protein motif:HMM:NF013766.2
GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011711655.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011711654.1
COORDINATES: similar to AA sequence:RefSeq:WP_000212712.1
GO:0003988 - acetyl-CoA C-acyltransferase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:YP_004997480.1
GO:0070403 - NAD+ binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
fatty acid oxidation complex subunit alpha FadB
aspartyl/asparaginyl beta-hydroxylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005006230.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006227.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006225.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005006224.1
COORDINATES: similar to AA sequence:RefSeq:WP_005006221.1