Thermus parvatiensis strain RL plasmid pTP143, complete sequence.
type: Entry
definition: Thermus parvatiensis strain RL plasmid pTP143, complete sequence.
sequence version: NZ_CP014142.1
sequence date: 2023-03-24
sequence: sequence
division: CON
label: NZ_CP014142.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN04387723
keyword: RefSeq
source: Thermus parvatiensis
organism: Thermus parvatiensis
taxonomy: Bacteria; Deinococcota; Deinococci; Thermales; Thermaceae; Thermus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP014142.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. October-2015\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 428.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/24/2023 13:46:40\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,302\nCDSs (total) :: 2,246\nGenes (coding) :: 1,785\nCDSs (with protein) :: 1,785\nGenes (RNA) :: 56\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 3\nPseudo Genes (total) :: 461\nCDSs (without protein) :: 461\nPseudo Genes (ambiguous residues) :: 0 of 461\nPseudo Genes (frameshifted) :: 417 of 461\nPseudo Genes (incomplete) :: 58 of 461\nPseudo Genes (internal stop) :: 3 of 461\nPseudo Genes (multiple problems) :: 16 of 461\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 143277
topology: circular
so has quality: SO_0000988
location: 1..143277
location: region:1-143277:1
RO_0002162: 456163

NZ_CP014142
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN04387723
type: BioSample
SIO_000068: biosample

1
title: Genome sequence of Thermus parvatiensis, a thermophile isolated from a hot water spring
author: Tripathi, C.
author: Lal, R.
journal: Unpublished

2
title: Direct Submission
author: Tripathi, C.
author: Lal, R.
journal: Submitted (22-JAN-2016) Department of Zoology, University of Delhi, Chhatra Marg, Delhi 110007, India

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143277:1
position: 143277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

feature:1-143277:1:source
so part of: sequence
organism: Thermus parvatiensis
mol type: genomic DNA
strain: RL
isolation source: water
culture collection: DSM:21745
culture collection: MTCC:8932
type material: type strain of Thermus parvatiensis
plasmid: pTP143
country: India: Manikaran, Himachal Pradesh
lat lon: 31.378473 N 77.40694499 E
collection date: 2007

456163
type: Taxonomy
SIO_000068: taxonomy

AV541_RS10205
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
gene: narH
locus tag: AV541_RS10205
old locus tag: AV541_10210
pseudo: true
so part of: sequence
location: join(142928..143277,1..>1160)
location: region:1-143277:1
so has part: feature:142928-143277:1:exon
so has part: feature:1-1160:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:142928-143277:1:exon

position:142928:1
position: 142928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-1160:1:exon

position:1160:1
position: 1160
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

AV541_RS10205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
gene: narH
locus tag: AV541_RS10205
old locus tag: AV541_10210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019550639.1
GO component: GO:0009325 - nitrate reductase complex [Evidence IEA]
GO function: GO:0008940 - nitrate reductase activity [Evidence IEA]
GO process: GO:0009061 - anaerobic respiration [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nitrate reductase subunit beta
SIO_010081: AV541_RS10205
subclass of: SO_0000673
so part of: AV541_RS10205
location: join(142928..143277,1..>1160)
location: region:1-143277:1
so has part: feature:142928-143277:1:exon
so has part: feature:1-1160:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142928-143277:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-1160:1:exon

AV541_RS10210
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10210
old locus tag: AV541_10215
pseudo: true
so part of: sequence
location: 1184..1696
location: region:1184-1696:1
so has part: feature:1184-1696:1:exon
subclass of: SO_0000010

position:1184:1
position: 1184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696:1
position: 1696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184-1696:1:exon

AV541_RS10210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10210
old locus tag: AV541_10215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014511193.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: molecular chaperone TorD family protein
SIO_010081: AV541_RS10210
subclass of: SO_0000673
so part of: AV541_RS10210
location: 1184..1696
location: region:1184-1696:1
so has part: feature:1184-1696:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1184-1696:1:exon

AV541_RS10215
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
gene: narI
locus tag: AV541_RS10215
old locus tag: AV541_10220
pseudo: true
so part of: sequence
location: 1701..2389
location: region:1701-2389:1
so has part: feature:1701-2389:1:exon
subclass of: SO_0000010

position:1701:1
position: 1701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2389:1
position: 2389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1701-2389:1:exon

AV541_RS10215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
gene: narI
locus tag: AV541_RS10215
old locus tag: AV541_10220
inference: COORDINATES: protein motif:HMM:NF014695.2
GO component: GO:0009325 - nitrate reductase complex [Evidence IEA]
GO function: GO:0008940 - nitrate reductase activity [Evidence IEA]
GO process: GO:0019645 - anaerobic electron transport chain [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: respiratory nitrate reductase subunit gamma
SIO_010081: AV541_RS10215
subclass of: SO_0000673
so part of: AV541_RS10215
location: 1701..2389
location: region:1701-2389:1
so has part: feature:1701-2389:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1701-2389:1:exon

AV541_RS10220
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10220
old locus tag: AV541_10225
pseudo: true
so part of: sequence
location: 2402..3719
location: region:2402-3719:1
so has part: feature:2402-3719:1:exon
subclass of: SO_0000010

position:2402:1
position: 2402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3719:1
position: 3719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2402-3719:1:exon

AV541_RS10220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10220
old locus tag: AV541_10225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014511191.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MFS transporter
SIO_010081: AV541_RS10220
subclass of: SO_0000673
so part of: AV541_RS10220
location: 2402..3719
location: region:2402-3719:1
so has part: feature:2402-3719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2402-3719:1:exon

AV541_RS10225
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10225
old locus tag: AV541_10230
pseudo: true
so part of: sequence
location: 3829..4046
location: region:3829-4046:1
so has part: feature:3829-4046:1:exon
subclass of: SO_0000010

position:3829:1
position: 3829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4046:1
position: 4046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3829-4046:1:exon

AV541_RS10225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10225
old locus tag: AV541_10230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014511190.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF2249 domain-containing protein
SIO_010081: AV541_RS10225
subclass of: SO_0000673
so part of: AV541_RS10225
location: 3829..4046
location: region:3829-4046:1
so has part: feature:3829-4046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3829-4046:1:exon

AV541_RS10230
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10230
old locus tag: AV541_10235
so part of: sequence
location: 4019..4666
location: region:4019-4666:1
so has part: feature:4019-4666:1:exon
subclass of: SO_0000010

position:4019:1
position: 4019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4666:1
position: 4666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4019-4666:1:exon

AV541_RS10230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10230
old locus tag: AV541_10235
inference: COORDINATES: protein motif:HMM:NF021520.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2249 domain-containing protein
translation: MAGADREEVVRPEMKVAEVLKRWPHLLEVLVEASPAFQKLKNPSSAAPCPTWSPWPRRRGSEAWSRRSSWPGSTGPWGWRPGPRGQGGGEPPRHPAPPWLSAPVGFRLDVRPTLEAGGEPFQAIMAAAKEVKPGERLVLEVLFEPVPLYRVLAKQGFLAWCEKVGERHYRAHFYRQEVGEGRKGERDHAAPSPRRTGRTSRPRSSLRRTSSLLCP
SIO_010081: AV541_RS10230
subclass of: SO_0000673
so part of: AV541_RS10230
location: 4019..4666
location: region:4019-4666:1
so has part: feature:4019-4666:1:exon

WP_244880695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4019-4666:1:exon

AV541_RS12755
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12755
so part of: sequence
location: 4663..4836
location: region:4663-4836:1
so has part: feature:4663-4836:1:exon
subclass of: SO_0000010

position:4663:1
position: 4663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4836:1
position: 4836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4663-4836:1:exon

AV541_RS12755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12755
inference: COORDINATES: protein motif:HMM:NF021520.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2249 domain-containing protein
translation: MMRVLEALAALKPGEKLLVHHVRRPVHLLARLEEEGHAYLLKDLGPGQVKILIRKGG
SIO_010081: AV541_RS12755
subclass of: SO_0000673
so part of: AV541_RS12755
location: 4663..4836
location: region:4663-4836:1
so has part: feature:4663-4836:1:exon

WP_244880696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4663-4836:1:exon

AV541_RS10235
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10235
old locus tag: AV541_10240
so part of: sequence
location: 4850..5287
location: region:4850-5287:1
so has part: feature:4850-5287:1:exon
subclass of: SO_0000010

position:4850:1
position: 4850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5287:1
position: 5287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4850-5287:1:exon

AV541_RS10235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10235
old locus tag: AV541_10240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015717622.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGFWHFLFIRAALLYLIYTALLGTLFYFFPGLVGPFRPSHVHAGLVGFFLQMVMGVAYWMMPRPGGLRQDALEALTFLLLNAGLLLRLFLEPLHLLGQEGLRPWLGLSGGLQLLATLVFAWAMTRRVVTGDMLRKMREERERRGR
SIO_010081: AV541_RS10235
subclass of: SO_0000673
so part of: AV541_RS10235
location: 4850..5287
location: region:4850-5287:1
so has part: feature:4850-5287:1:exon

WP_060384853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4850-5287:1:exon

AV541_RS12760
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12760
so part of: sequence
location: 5284..5772
location: region:5284-5772:1
so has part: feature:5284-5772:1:exon
subclass of: SO_0000010

position:5284:1
position: 5284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5772:1
position: 5772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5284-5772:1:exon

AV541_RS12760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12760
inference: COORDINATES: protein motif:HMM:NF022995.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protoglobin domain-containing protein
translation: MKPEVRWEETLVLDLPPPPEEVFADLLAFGGLGEEEKRAMRLDAERLLEGAAAFVAQVYDHLSRHPGTARALGWEGRVPEEELYLRRAFFSAWLARTLGVDTSAEFAREVYRAGLWHGGLGPKRAHIPRSTWAFPSPWWGGTWRNGCGTPALGSSTSRPRRR
SIO_010081: AV541_RS12760
subclass of: SO_0000673
so part of: AV541_RS12760
location: 5284..5772
location: region:5284-5772:1
so has part: feature:5284-5772:1:exon

WP_244880697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5284-5772:1:exon

AV541_RS10245
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10245
old locus tag: AV541_10250
so part of: sequence
location: 6175..7326
location: region:6175-7326:1
so has part: feature:6175-7326:1:exon
subclass of: SO_0000010

position:6175:1
position: 6175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7326:1
position: 7326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6175-7326:1:exon

AV541_RS10245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10245
old locus tag: AV541_10250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016329270.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIVTAQNRTIPLSLPASFFFLGEAFFLAFALLFALHPEALAFPRHPLGLALAHLFLLGFGVGVLLGAMHQLVPVVLEAPLYRQELGYPVMLLWASGVGLLALGFAQAPALVPWGGALALAALFLFALHMLLTFLKAPRWNRVATSLAWVVFYLVLTPLLGLFQALSQRYGFYDPERLTWHLLAGLGGIFLLSIVGVGYKLVSMFTLTHGVDESALGLFLWAANLGLLGLAFGEGLGYLLLLLAYGLALYDAYRILKNRMKRALDIGVRHYLAGLFFLGLALLALPFHPVAAALWFALGFVGLVVTGMLYKILPFLVWTHRYAKRAGKEKVPLLKEMLPEGAGYLAGGLLAFGALLFPWFPWAAWAYALGALPHLYALWEVMRR
SIO_010081: AV541_RS10245
subclass of: SO_0000673
so part of: AV541_RS10245
location: 6175..7326
location: region:6175-7326:1
so has part: feature:6175-7326:1:exon

WP_060384854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6175-7326:1:exon

AV541_RS10250
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10250
old locus tag: AV541_10255
pseudo: true
so part of: sequence
location: 7323..7633
location: region:7323-7633:1
so has part: feature:7323-7633:1:exon
subclass of: SO_0000010

position:7323:1
position: 7323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7633:1
position: 7633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7323-7633:1:exon

AV541_RS10250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10250
old locus tag: AV541_10255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630621.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: metal-sulfur cluster assembly factor
SIO_010081: AV541_RS10250
subclass of: SO_0000673
so part of: AV541_RS10250
location: 7323..7633
location: region:7323-7633:1
so has part: feature:7323-7633:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7323-7633:1:exon

AV541_RS10255
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10255
old locus tag: AV541_10260
so part of: sequence
location: complement(7670..8242)
location: region:7670-8242:-1
so has part: feature:7670-8242:-1:exon
subclass of: SO_0000010

position:7670:-1
position: 7670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8242:-1
position: 8242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7670-8242:-1:exon

AV541_RS10255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10255
old locus tag: AV541_10260
inference: COORDINATES: protein motif:HMM:NF012742.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: substrate-binding domain-containing protein
translation: MDQFYPGSPFSHVMLDNERGVLEGVRYLAELGHRRIAFLGYISNPEVPDERSLAFPKAMRALGLPLPEAYLRPLPALGEPGAYALTHELMRLPEPPTALFAVSGAGALRALKELGLRIPQDVSLLTFDNYSWMELVDPPLDAIEQPVEEMARLATELVVRMVESRDPSLVVHYRLPGRLIRRGSCAPPRG
SIO_010081: AV541_RS10255
subclass of: SO_0000673
so part of: AV541_RS10255
location: complement(7670..8242)
location: region:7670-8242:-1
so has part: feature:7670-8242:-1:exon

WP_244880698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7670-8242:-1:exon

AV541_RS11500
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS11500
pseudo: true
so part of: sequence
location: <8411..>8509
location: region:8411-8509:1
so has part: feature:8411-8509:1:exon
subclass of: SO_0000010

position:8411:1
position: 8411
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:8509:1
position: 8509
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8411-8509:1:exon

AV541_RS11500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS11500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018465738.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: carbohydrate ABC transporter permease
SIO_010081: AV541_RS11500
subclass of: SO_0000673
so part of: AV541_RS11500
location: <8411..>8509
location: region:8411-8509:1
so has part: feature:8411-8509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8411-8509:1:exon

AV541_RS10265
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10265
old locus tag: AV541_10270
so part of: sequence
location: complement(8847..9827)
location: region:8847-9827:-1
so has part: feature:8847-9827:-1:exon
subclass of: SO_0000010

position:8847:-1
position: 8847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9827:-1
position: 9827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8847-9827:-1:exon

AV541_RS10265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10265
old locus tag: AV541_10270
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAFAVGSANLVALLALGLAGEGVGPEGALALVLGGGVGCTGPVLLRPTPESLRLGLVLLFHRLALALPLLFAPNPGIFPAHAGFHALAFLAFPLAFPLWERLADRLAPSPKPLAPKYLRPEALNDPLLAQGLALRELARIGDAARYMLEGVLKALVQETGHEAELAPLEEKVDRLSREVLVYVAKLPQDTPALPLLKAASELEHLADLAKRALRKAERLWTQGVTFSPEGKAELARIVGRTLARLERALTALATGNRALAERVLAEYPEVLAEVEASREAHLQRLRDRVETRASTLTHLDLLLLLEELNLGVNRLARLAEEIHKEG
SIO_010081: AV541_RS10265
subclass of: SO_0000673
so part of: AV541_RS10265
location: complement(8847..9827)
location: region:8847-9827:-1
so has part: feature:8847-9827:-1:exon

WP_244880699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8847-9827:-1:exon

AV541_RS12765
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12765
so part of: sequence
location: complement(9851..10315)
location: region:9851-10315:-1
so has part: feature:9851-10315:-1:exon
subclass of: SO_0000010

position:9851:-1
position: 9851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10315:-1
position: 10315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9851-10315:-1:exon

AV541_RS12765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12765
inference: COORDINATES: protein motif:HMM:NF014719.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MALVGVLALLYLGTLLVTEGAGGLVGPSGRRLLSRLRGFPLGLAALLLGAASGSGTGLSLLGRGLLQVGVLPLYEASLLALGGTLGATVLVAVAGLGNRTLAFAALSLALALEVLKRGQGANRLLFGLGLLFLGLDLARGEALGRGPGWEAFPP
SIO_010081: AV541_RS12765
subclass of: SO_0000673
so part of: AV541_RS12765
location: complement(9851..10315)
location: region:9851-10315:-1
so has part: feature:9851-10315:-1:exon

WP_244880700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9851-10315:-1:exon

AV541_RS10270
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10270
old locus tag: AV541_10275
so part of: sequence
location: complement(10317..10991)
location: region:10317-10991:-1
so has part: feature:10317-10991:-1:exon
subclass of: SO_0000010

position:10317:-1
position: 10317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10991:-1
position: 10991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10317-10991:-1:exon

AV541_RS10270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10270
old locus tag: AV541_10275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011229158.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerophosphodiester phosphodiesterase
translation: MTAFRQRPLRLGHRGAPLKAKENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDPDTPLGPVFQVDYADLKAREPDLPRLEEVLALREAFPQAVFNVELKSFPGLGEEAGRQLAALLRGREGVWVSSFDPLALLALRKAAPGLPLGFLMAEDHSALLPCLGVEAVHPHHALVTEEAVAGWRKRGLFVVAWTVNEEGEARRLLALGVDGLIGDRPEVLLPLGG
SIO_010081: AV541_RS10270
subclass of: SO_0000673
so part of: AV541_RS10270
location: complement(10317..10991)
location: region:10317-10991:-1
so has part: feature:10317-10991:-1:exon

WP_008633659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10317-10991:-1:exon

AV541_RS10275
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
gene: glpK
locus tag: AV541_RS10275
old locus tag: AV541_10280
so part of: sequence
location: 11126..12616
location: region:11126-12616:1
so has part: feature:11126-12616:1:exon
subclass of: SO_0000010

position:11126:1
position: 11126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12616:1
position: 12616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11126-12616:1:exon

AV541_RS10275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
gene: glpK
locus tag: AV541_RS10275
old locus tag: AV541_10280
EC number: 2.7.1.30
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014511174.1
GO function: GO:0004370 - glycerol kinase activity [Evidence IEA]
GO process: GO:0006071 - glycerol metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol kinase GlpK
translation: MAFLLALDQGTTSSRAILFTLEGRPVAVAKREFRQLYPKPGWVEHDPMEIWESQLWAAQEALRRAGVGGEAVLALGLTNQRETTLVWERATGRPLYNAIVWQDRRTAPLCEALRARGLEPLFRERTGLLFDPYFSGTKLLWLLENVPGLRARAERGEVCFGTVDTWLIWNLTGGKVFATDPTNASRTLFFNLHTLAWDPELLEALGIPAALLPEVRPSDGDFGETLPELLGAPVPIRGVLGDQQAALFGQGALGEGEGKCTYGTGAFLLLNTGKRPVLSEKGLLATVAWSLGGRATYALEGSLFVAGAAVGWLKEVGLLRESREVEALAGSVEDTGGVYFVPAFTGLGAPYWDPYARGAILGLTRGTTRAHLARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLQIQANLLGVPVAVPEVTETTALGAALMAGVGAGALSPEKVAGRYREAERFFPTMPEGRREALYRRWREAVERTRGWAKEEG
SIO_010081: AV541_RS10275
subclass of: SO_0000673
so part of: AV541_RS10275
location: 11126..12616
location: region:11126-12616:1
so has part: feature:11126-12616:1:exon

WP_060384857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11126-12616:1:exon

AV541_RS10280
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10280
old locus tag: AV541_10285
pseudo: true
so part of: sequence
location: 12613..14147
location: region:12613-14147:1
so has part: feature:12613-14147:1:exon
subclass of: SO_0000010

position:12613:1
position: 12613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14147:1
position: 14147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12613-14147:1:exon

AV541_RS10280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10280
old locus tag: AV541_10285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014511173.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
SIO_010081: AV541_RS10280
subclass of: SO_0000673
so part of: AV541_RS10280
location: 12613..14147
location: region:12613-14147:1
so has part: feature:12613-14147:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12613-14147:1:exon

AV541_RS11260
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS11260
so part of: sequence
location: 14225..14797
location: region:14225-14797:1
so has part: feature:14225-14797:1:exon
subclass of: SO_0000010

position:14225:1
position: 14225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14797:1
position: 14797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14225-14797:1:exon

AV541_RS11260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS11260
inference: COORDINATES: protein motif:HMM:NF014750.2
GO function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016625 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldehyde ferredoxin oxidoreductase N-terminal domain-containing protein
translation: MWRSLRVDLRAGKAYWQEVPPEEVAMGGRYRTARLLLEQEAYRFDPFSPENPLVFAIGPLAGTGSSNANRTSVGTRSPLTLGIKEANGGGTFGYALGQMRLSHLVLEGKSPDWVVLRITRTGEVFFDPAEGLLGLGNFQAANRLFAAYGRRIAFALLGPVGEYGGLLSGIAFSDTDGRPSRLAARGAWGR
SIO_010081: AV541_RS11260
subclass of: SO_0000673
so part of: AV541_RS11260
location: 14225..14797
location: region:14225-14797:1
so has part: feature:14225-14797:1:exon

WP_244880701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14225-14797:1:exon

AV541_RS12770
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12770
pseudo: true
so part of: sequence
location: complement(<14811..14957)
location: region:14811-14957:-1
so has part: feature:14811-14957:-1:exon
subclass of: SO_0000010

position:14811:-1
position: 14811
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:14957:-1
position: 14957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14811-14957:-1:exon

AV541_RS12770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014511172.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: CPBP family intramembrane metalloprotease
SIO_010081: AV541_RS12770
subclass of: SO_0000673
so part of: AV541_RS12770
location: complement(<14811..14957)
location: region:14811-14957:-1
so has part: feature:14811-14957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14811-14957:-1:exon

AV541_RS10290
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
gene: rgy
locus tag: AV541_RS10290
old locus tag: AV541_10295
so part of: sequence
location: complement(14970..17420)
location: region:14970-17420:-1
so has part: feature:14970-17420:-1:exon
subclass of: SO_0000010

position:14970:-1
position: 14970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17420:-1
position: 17420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14970-17420:-1:exon

AV541_RS10290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
gene: rgy
locus tag: AV541_RS10290
old locus tag: AV541_10295
EC number: 3.6.4.12
EC number: 5.6.2.2
inference: COORDINATES: protein motif:HMM:TIGR01054.1
GO function: GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: reverse gyrase
translation: MGGAAWKGGLFFLPGDLPKEAALDLARFLRARGLRARAYLEPEALEAFRRGEADHLVGFASWRNPLARGLDLPGRVRYALFLGVPKLRFALGEDLAPQELVRLGLALLPLLEDPRLKALVRSLARKPGLQEKEVAPLREALLERLADPAFRARVAESPEVGLTFVGEKPVLVFADVTGYLQASGRTSRLTPAGLTQGLALLLAEDRKAFTALVRRLGYLLEAPPLPVAEADLEALLKRVDEDRERLARGERGGLALPERVVVVESPNKARTLAGFFGRPMRRYLPGLVVYEALAEEGYLVVTATRGHVTDLALRGGLYGVETTPAYRPRYHPLRACPEGSVPDPFCPDGTESQPDRDRALQALRSLALEAQDFLLATDPDTEGEKIAYDVYLALRAFGREVVRGEFHAVTPRAFLEALRRPREVKEDLVEAQMVRRIADRWIGFALSEDLQRLLGRRGLSAGRVQTPVLGWVIAREREARTRLPFTEVALRGLALRFPGEVRERVLLLEVLEEGEREQNPLPPYTTDALLADASREGFRVPEAMALAQDLFEAGLITYHRTDATRVAPEGMALARRLIEARFGPEYARPRPWGEGGAHEAIRPTRPLWPEDLEEAGLFQALPLSEAHGRLYDLIFRRFLASQMAPARVREKRLRACLGEACQELTLRVALPFPGFARVWPLGLDPDLAAGPYAVAPKTVRLPKAARYTEGELVAEMKRRGLGRPSTYATIVERLLERRYVVRRGPFLVPTRLGERVYALLTEKPPLAPVARRFVGEAFTREVEAWMDRVEAGEDPTPLLRELHEATLALLEALGDD
SIO_010081: AV541_RS10290
subclass of: SO_0000673
so part of: AV541_RS10290
location: complement(14970..17420)
location: region:14970-17420:-1
so has part: feature:14970-17420:-1:exon

WP_244880702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14970-17420:-1:exon

AV541_RS12775
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12775
pseudo: true
so part of: sequence
location: complement(<17798..18049)
location: region:17798-18049:-1
so has part: feature:17798-18049:-1:exon
subclass of: SO_0000010

position:17798:-1
position: 17798
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:18049:-1
position: 18049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17798-18049:-1:exon

AV541_RS12775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12775
inference: COORDINATES: protein motif:HMM:NF012492.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AV541_RS12775
subclass of: SO_0000673
so part of: AV541_RS12775
location: complement(<17798..18049)
location: region:17798-18049:-1
so has part: feature:17798-18049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17798-18049:-1:exon

AV541_RS10295
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10295
old locus tag: AV541_10300
so part of: sequence
location: complement(18516..20048)
location: region:18516-20048:-1
so has part: feature:18516-20048:-1:exon
subclass of: SO_0000010

position:18516:-1
position: 18516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20048:-1
position: 20048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18516-20048:-1:exon

AV541_RS10295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10295
old locus tag: AV541_10300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630417.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEPWAHAVNLHRAVEAALEAQNLAHLQVRREDVEGAKPLVRALWTGEWRADPLAKSRDGVVPGYLLLGFLGGHFFDRDLPENDLAFWPEFHRALGLNQGQPTPKQRDKLWKVLEGLPGTKAFLRFHADGKRDFVGTLKALFGARTLRLKEILDHLRLYRDEAKLQEEALGPYASLVRGLKEALDLLAEEALDAAEQEDVEALVARLEALGFYAEEPHPLRFLFHRSPKAFAELYAEWRGEKKATPLRHPQVRVEVLQGKEVLERVLPQIRREVLVEGALVYGQVRLKSGLFRGFSWRPRLDTEGNPIPEEVAVPLGEGQVVLRLHHRAWGVRFLDERGQVCPEWRPPEPLEVRPLVDEGTPVRFLLEGGGDPVERLEDLPLELGLPEDALVVEALVFGSREHGEWRPLGRLPVRLEARLEERLSETALELEVFPRGPLEAVWLAPAGPKQTFPEGRACIPRDLWPAKILVKAWGRAWEILVPPKGWPEKAWRRGLGLPAVGANKPEGSQP
SIO_010081: AV541_RS10295
subclass of: SO_0000673
so part of: AV541_RS10295
location: complement(18516..20048)
location: region:18516-20048:-1
so has part: feature:18516-20048:-1:exon

WP_060384858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18516-20048:-1:exon

AV541_RS10300
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10300
old locus tag: AV541_10305
so part of: sequence
location: complement(20024..20566)
location: region:20024-20566:-1
so has part: feature:20024-20566:-1:exon
subclass of: SO_0000010

position:20024:-1
position: 20024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20566:-1
position: 20566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20024-20566:-1:exon

AV541_RS10300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10300
old locus tag: AV541_10305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014511169.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTWEEEKKALEARFREDLAWYEREWEACRRKLEEERQEWNAARKRLLNELSQSSRKVWELKKRLEALQGLEERYSALEREVRGLRRKLAALDRPAIGRRYLEALREDLALWDELLLAEAERLQTRGLEGFLQELWAKREAAFRHWQAGEDVDFATVRTALVLEWAIWTWLEAGWNPGRTP
SIO_010081: AV541_RS10300
subclass of: SO_0000673
so part of: AV541_RS10300
location: complement(20024..20566)
location: region:20024-20566:-1
so has part: feature:20024-20566:-1:exon

WP_008633651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20024-20566:-1:exon

AV541_RS10305
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10305
old locus tag: AV541_10310
so part of: sequence
location: complement(20563..21396)
location: region:20563-21396:-1
so has part: feature:20563-21396:-1:exon
subclass of: SO_0000010

position:20563:-1
position: 20563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21396:-1
position: 21396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20563-21396:-1:exon

AV541_RS10305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10305
old locus tag: AV541_10310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630419.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDPSKAFRIPSLEELPPRETPLRPTTPPLPEFTPTGEGALPALDPKATPAPPPERGPLSLQGELKRTRDQLEKLKVKLAQAEKARAEAVKERDKALQERAALRKQVEALTASHAAMRQALEKAQEDLKILQEELETLKKEKGELETLRKERDELFARAARWEKAEVLRERLQEPFPLEAFFRMLFVPYSELGPGPEVRLLALIEGYRALLQGKEHPMLSRTNRELLSGKPEGIVLLGVERLLLDLAESPLPRWLKTHAWLAEAFLTREKLSSPREEA
SIO_010081: AV541_RS10305
subclass of: SO_0000673
so part of: AV541_RS10305
location: complement(20563..21396)
location: region:20563-21396:-1
so has part: feature:20563-21396:-1:exon

WP_038035691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20563-21396:-1:exon

AV541_RS13210
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS13210
old locus tag: AV541_10315
so part of: sequence
location: complement(21415..26187)
location: region:21415-26187:-1
so has part: feature:21415-26187:-1:exon
subclass of: SO_0000010

position:21415:-1
position: 21415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26187:-1
position: 26187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21415-26187:-1:exon

AV541_RS13210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS13210
old locus tag: AV541_10315
EC number: 3.6.4.12
inference: COORDINATES: protein motif:HMM:TIGR00614.1
GO function: GO:0004386 - helicase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RecQ family ATP-dependent DNA helicase
translation: MPYEEYEAKKVAPKEALEELLAFLGGRPLLGHNLLRYDLPLLQRHLEEAGLPRWQGEALDTLRLAHLLFPTPPGGLEGYRLGDLYAFLLGRPLEGAHRALNDAQATLAVFHRLLDQGRRALAQHPGLVRAWRELGLPEGHLFPEDEGLIKDLLARQADVEAFFVEKEGRPFPAPTDLGPDLLPKPRPAQRRMFQLVEEALSREEILLLEAPTGTGKTKGYLYPVLHQRKPTWVATHTKVLQAQAMEELRAVAQRGYRVRAALVKSPQDTLCPDRLLEAFLREARSGKPGEDVGAAIAVLLHYAAQRGHDLEALPAYWHFLEGFREVRGRVGTNPDRCRRECPFASACAYQAILRRREEAQILVTNQAYLLHSLLGEKALPEARPALVLDEAHHLEDVATEALTLKVDGEGLRHLLEALANPSKRSGLLQERDYLKSLEDDLRASAETLAKEAVPKALEALKAYSERMERFLKRRGVGSPEHGLTLPLEPSWTRDEEYPLLDREERHLIQSLEALAKGLEGLLDAHPPPWPLLLREIRPLLQELRQAIRLFLRRKRVLKGEADEALHLTRLDPVTGTWSHLAEPIEVAAELEEKLWPAFRGVVLTSATLAVPTETDPEGFAFLQRALGLPPQARAERLPPSLPYHRAHLLVPRHLPEARESTLPRFQRLLHRELRLVLGQVPRTLTLFTSLSRLEAAKKALEDLPHLRAPFTRREREDTVRFARSNPTEPLAALGSRSFMEGVDLPHLRVVNLERLPFPYPSPLLKRRMALAYERGLDPWEDYYLPKAVLSFVQAFGRLIRDDRQVAGDGAFILWDKKLLHADYQELFYRALPDGVAHHFPGDRQAFYRKLEEILGLAFPGAEEELSEEAWAKVKAILAEAGLDPLERARRLAEEVHGVFVDEARWAKQREAVRAALEGRHLLALLPTGFGKSLAFQIPAWMSPGLTLVISPLVALMKDQVDRLQELGLPALALHGLMSWGEQASVLDEVQAGQVRLLYLAPERINRSEAVRKALRELREAGKLVRVVFDEAHCLLEWGYDFRPDYLKALEWLRELGLPMSFFTATLMPEERARLKEVAGIPEAVEVLPETFHRPNLRFVVRQAPGEVGKFDRLAQALLWVEKTGGSAIVYATSRAETERLAWALDRLFPSLGVEAYHAGLGPVLRKEVQERFMRGESRVVVATTAFGMGVDKPDVRLVVHWRPPLSLAEYAQQAGRAGRDGKEAYALLLYTHGDWGFLRWMVGLGQRGTERLETLAEPLLARLPFRGYRKELLELLMTEGAEEAAEKEASDLEAGPALSGEDLERLLLGMEQAGLIRYEYLPGKASLYLSPEQWEAFARTPGLAERLVRAGYRPGSRQNVLDLSKLPREEAEDLDRYLYQAYREGKAILYRYREPLLLVERVDSGKIVHWRASLEASRARALERLGRVQAYATQGRCRALVLLSHLNGERRRCGTCDVCAQDGGPWEARENFHEEELLRAYKPLDTLLAFFRWAEDHYPQKPLLGRKATLMALRGKAWTGNGPLHRRYLENRFFGHLSFLKPKELEQAFREALERGYLEQKGSWQGHPLFGLTDHGRQRLRKGARGKEAR
SIO_010081: AV541_RS13210
subclass of: SO_0000673
so part of: AV541_RS13210
location: complement(21415..26187)
location: region:21415-26187:-1
so has part: feature:21415-26187:-1:exon

WP_276325525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21415-26187:-1:exon

AV541_RS10315
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10315
old locus tag: AV541_10320
so part of: sequence
location: 26559..27056
location: region:26559-27056:1
so has part: feature:26559-27056:1:exon
subclass of: SO_0000010

position:26559:1
position: 26559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27056:1
position: 27056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26559-27056:1:exon

AV541_RS10315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10315
old locus tag: AV541_10320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019551365.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMRWKSVLGLAVLLLASLALAQALTLDLRPYLVKVVEGKEVYEANPLAVRPGDVLEWRLVAENRAQGDLRQVALVIPIPKETYYLEGSAKPLQVGGTIVPPEFSFDGGKTFGRPPLKKRIRVVENGKEVEKEVEVKPEEYTHARWVIPVLSKGDKVMVSLRTIVR
SIO_010081: AV541_RS10315
subclass of: SO_0000673
so part of: AV541_RS10315
location: 26559..27056
location: region:26559-27056:1
so has part: feature:26559-27056:1:exon

WP_024119628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26559-27056:1:exon

AV541_RS12790
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12790
so part of: sequence
location: complement(27106..27477)
location: region:27106-27477:-1
so has part: feature:27106-27477:-1:exon
subclass of: SO_0000010

position:27106:-1
position: 27106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27477:-1
position: 27477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27106-27477:-1:exon

AV541_RS12790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12790
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNERGLFFRWAILPGNARETWGRDLLDGLPAVLGDRGFRWVQGVKTPPYRVRGGRVVETGWRGWMGRVRNWIETRFSVMVRSLGLHRIEARSYWGLVARVNLILLVHNLIRSRVLLRMAGVEL
SIO_010081: AV541_RS12790
subclass of: SO_0000673
so part of: AV541_RS12790
location: complement(27106..27477)
location: region:27106-27477:-1
so has part: feature:27106-27477:-1:exon

WP_238529993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27106-27477:-1:exon

AV541_RS12795
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12795
so part of: sequence
location: complement(27499..27795)
location: region:27499-27795:-1
so has part: feature:27499-27795:-1:exon
subclass of: SO_0000010

position:27499:-1
position: 27499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27795:-1
position: 27795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27499-27795:-1:exon

AV541_RS12795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12795
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQGQDLAKGYLAAKTTLKAYFPSLPHLSRFYRVLQKAQGLLAHLAMRLSGGQGLLQVVDLKPIPLAHGHRIHGLSLPEAAMGVGPLGAFAGYVHKLFP
SIO_010081: AV541_RS12795
subclass of: SO_0000673
so part of: AV541_RS12795
location: complement(27499..27795)
location: region:27499-27795:-1
so has part: feature:27499-27795:-1:exon

WP_081481459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27499-27795:-1:exon

AV541_RS10325
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10325
old locus tag: AV541_10330
so part of: sequence
location: 28135..29259
location: region:28135-29259:1
so has part: feature:28135-29259:1:exon
subclass of: SO_0000010

position:28135:1
position: 28135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29259:1
position: 29259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28135-29259:1:exon

AV541_RS10325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10325
old locus tag: AV541_10330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008630830.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MRGALAAGSARVSEMVASLPSPLQNRFHQAKALYRFLSNPRVEAEALLDRVYQESATALEGEEVLVLLDLSPVVKPYARALEGIARVGKDRRPGYELLTALGLDPAGRLALGYAHLVAYGERGFASLPKEVEGAIEAARERLGGVGRRLVYVADRGFDDRKVFGQVLALGEEFVVRVYRDRKLGEGGSLAKVASSLALPCGEEVELRVGGRYQRVRLHFGWREVEVEGRRLHLVVCRVPALGRRGEWWLLTSLPVRGREEAARVVEAYRRRWEVERFFRLLKTGLGLETFQVRGLARIRKVVAVLLGLAVFLWEVERLGDPFKGFLLQLGGKLGLPSERDGPYLLLRGLVRLLNYEVTQELLKQAKGGRGRSFG
SIO_010081: AV541_RS10325
subclass of: SO_0000673
so part of: AV541_RS10325
location: 28135..29259
location: region:28135-29259:1
so has part: feature:28135-29259:1:exon

WP_008630830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28135-29259:1:exon

AV541_RS10330
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10330
old locus tag: AV541_10335
so part of: sequence
location: complement(29314..30342)
location: region:29314-30342:-1
so has part: feature:29314-30342:-1:exon
subclass of: SO_0000010

position:29314:-1
position: 29314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30342:-1
position: 30342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29314-30342:-1:exon

AV541_RS10330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10330
old locus tag: AV541_10335
inference: COORDINATES: protein motif:HMM:NF016056.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DCC1-like thiol-disulfide oxidoreductase family protein
translation: MALLGGLLLVSLDERNPFVLNTGHQLMGAFLLLSALLPLAGSWGFQAALDPSPKEAFRTPVVLPFLLVAFTAYFLNAVAKDFEAYFLQGSAVYEAMANYGNPLGEWGAEALAPLLPWLSRYTWLVEAGAPLLLLVPLWWARTLAVLLLGSLHLGFLLFLDIGNFPLVMLSFLALFLPKEFWRLLSRPRPWVRVHYDGGCGFCARAVAVLARLLGVRVQALPAEGEALDLLLARRSWVVEWEGKYHLEGWGFYALLRASPLWPLAFLWRVPGFPWLANRAYRLVADRRPSLAWTRRHLPERPVLPPGPWAVAVALAFSLVYGFYSLYGPWDSFVCYLIWTLGM
SIO_010081: AV541_RS10330
subclass of: SO_0000673
so part of: AV541_RS10330
location: complement(29314..30342)
location: region:29314-30342:-1
so has part: feature:29314-30342:-1:exon

WP_008633641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29314-30342:-1:exon

AV541_RS10340
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10340
old locus tag: AV541_10345
so part of: sequence
location: 31388..31843
location: region:31388-31843:1
so has part: feature:31388-31843:1:exon
subclass of: SO_0000010

position:31388:1
position: 31388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31843:1
position: 31843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31388-31843:1:exon

AV541_RS10340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10340
old locus tag: AV541_10345
inference: COORDINATES: protein motif:HMM:NF013970.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MTALDTGFFLRLLEGHEGAKAKWQALVEGEEGLVSGLSLVELLRLGLKGALARQDAELLLKAIPAVCRVVWPDWGIGERAARLSHGLHLPLVDALILATALEGGRRRFGPRTPTWPGMRGRSGWSFSGRRGKPSGAKALDGRLFHKDSSIT
SIO_010081: AV541_RS10340
subclass of: SO_0000673
so part of: AV541_RS10340
location: 31388..31843
location: region:31388-31843:1
so has part: feature:31388-31843:1:exon

WP_244880703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31388-31843:1:exon

AV541_RS11510
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS11510
pseudo: true
so part of: sequence
location: 31939..32779
location: region:31939-32779:1
so has part: feature:31939-32779:1:exon
subclass of: SO_0000010

position:31939:1
position: 31939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32779:1
position: 32779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31939-32779:1:exon

AV541_RS11510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS11510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013616019.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: AV541_RS11510
subclass of: SO_0000673
so part of: AV541_RS11510
location: 31939..32779
location: region:31939-32779:1
so has part: feature:31939-32779:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31939-32779:1:exon

AV541_RS12800
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12800
so part of: sequence
location: complement(33383..33520)
location: region:33383-33520:-1
so has part: feature:33383-33520:-1:exon
subclass of: SO_0000010

position:33383:-1
position: 33383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33520:-1
position: 33520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33383-33520:-1:exon

AV541_RS12800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12800
inference: COORDINATES: protein motif:HMM:NF024980.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix-turn-helix domain-containing protein
translation: MDPRRAWSWMKRLGFAPLRPRPRHRERDLAEGEAFKKTSSSRSFS
SIO_010081: AV541_RS12800
subclass of: SO_0000673
so part of: AV541_RS12800
location: complement(33383..33520)
location: region:33383-33520:-1
so has part: feature:33383-33520:-1:exon

WP_244880704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33383-33520:-1:exon

AV541_RS10360
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10360
old locus tag: AV541_10365
so part of: sequence
location: complement(33562..33909)
location: region:33562-33909:-1
so has part: feature:33562-33909:-1:exon
subclass of: SO_0000010

position:33562:-1
position: 33562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33909:-1
position: 33909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33562-33909:-1:exon

AV541_RS10360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10360
old locus tag: AV541_10365
inference: COORDINATES: protein motif:HMM:NF024940.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MDLAKHQRRPRLQLKLQHHPDNLHALYRESQDPIERSRWHALWLLATGHPIPKVAQTLGYSTRWVRDTLHRYNQGKPMADLRHQNPGQPPLLPQNSRRPSARPSCNPIPGTEFGP
SIO_010081: AV541_RS10360
subclass of: SO_0000673
so part of: AV541_RS10360
location: complement(33562..33909)
location: region:33562-33909:-1
so has part: feature:33562-33909:-1:exon

WP_244880705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33562-33909:-1:exon

AV541_RS10365
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10365
old locus tag: AV541_10370
so part of: sequence
location: 33892..34782
location: region:33892-34782:1
so has part: feature:33892-34782:1:exon
subclass of: SO_0000010

position:33892:1
position: 33892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34782:1
position: 34782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33892-34782:1:exon

AV541_RS10365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10365
old locus tag: AV541_10370
inference: COORDINATES: protein motif:HMM:NF017541.2
GO function: GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TROVE domain-containing protein
translation: MFGEVHGPILRERTRGISYEAWRKVLPHLEGLALIRNLRNLQEHGLLDRREVQDLLLAKLADPERVRGWRIFPHQWLQALYQLRPGDGVAQGGMRPHPVYHALEGALEASVPRLDLEGETLILVDVSGSMYQRMSRKGESTYALAAATLGAVLYRQAGGRLFGFSDDLIPVPFSPGDPLVAMVEHLLTSGGYGTCLERALGKALRSFEGRRVVILTDEQVADDAYRPLRPWLLEDDRRRVHVINLAGYAPLAFPQNGISRIGGFSDRLLELLPLLEAQDPIGWMKAFGREHGLEVG
SIO_010081: AV541_RS10365
subclass of: SO_0000673
so part of: AV541_RS10365
location: 33892..34782
location: region:33892-34782:1
so has part: feature:33892-34782:1:exon

WP_244880717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33892-34782:1:exon

AV541_RS10370
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10370
old locus tag: AV541_10375
so part of: sequence
location: 34810..35400
location: region:34810-35400:1
so has part: feature:34810-35400:1:exon
subclass of: SO_0000010

position:34810:1
position: 34810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35400:1
position: 35400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34810-35400:1:exon

AV541_RS10370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10370
old locus tag: AV541_10375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019551678.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLALDPGTVHNAWSVVEESEGRLFVVEHGSLSASRRGRQEVVGAVEALVIQVVERHGPDLLLVELPKGRKPSVPREVWRELQGIAHSLVSRLSSTLPVCTAFASTPRGFHDPFQPPGWRQRLTGLNRPSDLDVRRSLEGLGLGPLPRNSHELDAVGLGVAYFHFPDLFQWVEEPSSRDPGPRWDALTEELRRLWAA
SIO_010081: AV541_RS10370
subclass of: SO_0000673
so part of: AV541_RS10370
location: 34810..35400
location: region:34810-35400:1
so has part: feature:34810-35400:1:exon

WP_244880718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34810-35400:1:exon

AV541_RS10375
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10375
old locus tag: AV541_10380
so part of: sequence
location: 35422..35847
location: region:35422-35847:1
so has part: feature:35422-35847:1:exon
subclass of: SO_0000010

position:35422:1
position: 35422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35847:1
position: 35847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35422-35847:1:exon

AV541_RS10375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10375
old locus tag: AV541_10380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008633617.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YbjN domain-containing protein
translation: MEERMWIAEEEVSKARLEEICRMAGYTTSVDQDGDLVVHGDALKTLVIVSREKSIIHFACVFRFEPWVPEQDRLLFVNRLNDTTHVLRFSMKVQSPDILVVDYDLPFQGGVLESQIRFVLRLFHQRLPLLIALHGGAGLLR
SIO_010081: AV541_RS10375
subclass of: SO_0000673
so part of: AV541_RS10375
location: 35422..35847
location: region:35422-35847:1
so has part: feature:35422-35847:1:exon

WP_060384860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35422-35847:1:exon

AV541_RS10380
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10380
old locus tag: AV541_10385
so part of: sequence
location: 35946..37124
location: region:35946-37124:1
so has part: feature:35946-37124:1:exon
subclass of: SO_0000010

position:35946:1
position: 35946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37124:1
position: 37124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35946-37124:1:exon

AV541_RS10380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10380
old locus tag: AV541_10385
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008633616.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair exonuclease
translation: MKTSLRLLHTADWHLGKTLKGVDRTPEVASALEEVLRLVRSEKVDLVLVSGDLMDHPQPSTEAEALLVEFFLRLAEAKVSAMAIAGNHDSGERMERVYRQLLGRFGVELRGQLAFAHEGGVVDRGGLRVALVPFLSERRLAKTLELPPEERHLAYAEGMRRLLAHLAQEGTPDVYLAHFTVAGARVGGGEYVLHLAEHYAVPPGALPGARYIALGHLHALQQVAENAWYPGSLIPLDFGASERAERGVVLVELPLDRHLPARVHPMPTNWGKPLRTFRVRVSQVQESPGERARILGEIEAFPGWARVVVQGPMHLELRDTLKEMERVLEVAWEEEREGDGGEAHPPPSALEEAYRQYLMEAGRWEGDPPGEELVHSFAELRQEVEEHEAGED
SIO_010081: AV541_RS10380
subclass of: SO_0000673
so part of: AV541_RS10380
location: 35946..37124
location: region:35946-37124:1
so has part: feature:35946-37124:1:exon

WP_008633616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35946-37124:1:exon

AV541_RS10385
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10385
old locus tag: AV541_10390
so part of: sequence
location: 37105..39822
location: region:37105-39822:1
so has part: feature:37105-39822:1:exon
subclass of: SO_0000010

position:37105:1
position: 37105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39822:1
position: 39822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37105-39822:1:exon

AV541_RS10385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10385
old locus tag: AV541_10390
inference: COORDINATES: protein motif:HMM:NF014516.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMC family ATPase
translation: MRPVRIELEGFGPYRKRQVVDLEGADLFVITGPTGSGKTTLLDAITFALYGRVHRLGSRRIEEMRHPEAERMWVSLTFQVDGRVYRVEREVGRRREVRVAEHLGERWQIWDVRGRNLEGSLERILGMDYDTFVRTVLLPQGEFDRFLRRDKGSERRKILDHLFGLDVLQDMRTKASERKGNLESRIAALEAELESLKEATPEALEQVRNRMGQVKKALEAKTSELKKVQDVRDHFRALLALYGEKARLQEELSRLMEAEPALLGDKERAELSQRARELVDLLAEKEKAEALLKELKEADAQLEEERDALARELDLAELERLEGLWAQRAYLRSLHDLLGKAGEKPALHPEASPWEEEDEAALREVLEELPRMEKARKLKEKLVRQEKELSEVEAGLQQTRMALVQTLQAEVEELEERLGHLERHLGELGVARFRHLLRPGEPCPLCLTPVQALPPALEEGKEKELEGERKQVETQLARKRVELERLLTLVGQEVPPAKVGVVAALEKEETRLARQADELRVAVGSLKKALADLEVEDLDLEEEFRRLGQEKHRLALSLAHHLAQVLGGKNLKDFMTWLEERLRHLRGQKKRLEELEEGRRELREELGLVLARLEEKVRALEQAWKDNPDLPRDGKALRALLLDEAEEKRALEDWEKHRDHVLRVEGALESLEARLQELAPLPETPPTQEDLEALEKRLEDLSQEIGELSQELGELRGELVNLEGEVKRRVGLEEDLRERRRQFRIWEALTSDLQQRAFPEWLHRRLQRALLVRANEILHQLSSGRYSLRVREESGLEYEVYDAWTGVHRSAHTLSGGESFLASLALALALSEELARRKLEAFFLDEGFGTLDGETLEVVAQALEGLGRQNRMIGVITHVESLAQRFPMRLRVRKGRGESVVEWVD
SIO_010081: AV541_RS10385
subclass of: SO_0000673
so part of: AV541_RS10385
location: 37105..39822
location: region:37105-39822:1
so has part: feature:37105-39822:1:exon

WP_060384861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37105-39822:1:exon

AV541_RS10390
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10390
old locus tag: AV541_10395
so part of: sequence
location: complement(39830..40108)
location: region:39830-40108:-1
so has part: feature:39830-40108:-1:exon
subclass of: SO_0000010

position:39830:-1
position: 39830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40108:-1
position: 40108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39830-40108:-1:exon

AV541_RS10390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10390
old locus tag: AV541_10395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015983999.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIKYNPFTGKYEYYDEGKEHKEVLNPFTGKYGVGTDDDAEVNRFTGRYEARKAKDLCEKYNPYTGSYELVPCDWEIRYNPYTQRYEFGPKE
SIO_010081: AV541_RS10390
subclass of: SO_0000673
so part of: AV541_RS10390
location: complement(39830..40108)
location: region:39830-40108:-1
so has part: feature:39830-40108:-1:exon

WP_060384862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39830-40108:-1:exon

AV541_RS11290
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS11290
so part of: sequence
location: complement(40167..40433)
location: region:40167-40433:-1
so has part: feature:40167-40433:-1:exon
subclass of: SO_0000010

position:40167:-1
position: 40167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40433:-1
position: 40433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40167-40433:-1:exon

AV541_RS11290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS11290
inference: COORDINATES: protein motif:HMM:NF040570.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MDAGWEQFLRILAYKAAEAGRQVIKVDPKYTSQDCPVCGYREKKPLWVREYTCPQCGAHLHRDIAAAQNILARARTEPSGMGTAWAVP
SIO_010081: AV541_RS11290
subclass of: SO_0000673
so part of: AV541_RS11290
location: complement(40167..40433)
location: region:40167-40433:-1
so has part: feature:40167-40433:-1:exon

WP_244880706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40167-40433:-1:exon

AV541_RS10395
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10395
old locus tag: AV541_10400
so part of: sequence
location: complement(40507..41163)
location: region:40507-41163:-1
so has part: feature:40507-41163:-1:exon
subclass of: SO_0000010

position:40507:-1
position: 40507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41163:-1
position: 41163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40507-41163:-1:exon

AV541_RS10395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10395
old locus tag: AV541_10400
inference: COORDINATES: protein motif:HMM:NF013752.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MAKARGEKTKRRVLALDATALPAQATDPEARWGRDSKGQWVYGYKLHLLLDLDTGEILAHKIAPTGLTSVTPANRHDGPVGWALVRGIASWEGEKPSLLLGDSAYDAEGLFQAAEEKGLLLISGHNRRRGKPRGRRRGENLRRLQRGAYRRLYRRRWEVETVFGLLKGSLGLAACLRRVRGLKAVSRQVTAVVTAFSFVAQVLAREGLPPTWVARVAA
SIO_010081: AV541_RS10395
subclass of: SO_0000673
so part of: AV541_RS10395
location: complement(40507..41163)
location: region:40507-41163:-1
so has part: feature:40507-41163:-1:exon

WP_008633614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40507-41163:-1:exon

AV541_RS10400
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10400
old locus tag: AV541_10405
so part of: sequence
location: 41471..41830
location: region:41471-41830:1
so has part: feature:41471-41830:1:exon
subclass of: SO_0000010

position:41471:1
position: 41471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41830:1
position: 41830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41471-41830:1:exon

AV541_RS10400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10400
old locus tag: AV541_10405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013157072.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: twitching motility protein PilT
translation: MFPHIYPSPFLIGVSMHMQVNIRKGGKWLLFEANALIAQQALGRMMEALEILPLRLDDLEAIQILLLGMQGWRGTLEDASVALLALRLKAPVWTLNYRDPEALKGLSFWARVTIPWSWV
SIO_010081: AV541_RS10400
subclass of: SO_0000673
so part of: AV541_RS10400
location: 41471..41830
location: region:41471-41830:1
so has part: feature:41471-41830:1:exon

WP_244880707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41471-41830:1:exon

AV541_RS12805
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12805
so part of: sequence
location: 41971..42486
location: region:41971-42486:1
so has part: feature:41971-42486:1:exon
subclass of: SO_0000010

position:41971:1
position: 41971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42486:1
position: 42486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41971-42486:1:exon

AV541_RS12805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12805
inference: COORDINATES: protein motif:HMM:NF024571.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MYPRFLTPRLLEALQDTPVVFLAGARQVGKSTLVRSLGYGRYLTLDDPLVLASAQHDPLGFLQAQEGPLVLDEVQRAPGLLRAIKLLVDEDRRPGRFLLTGSANVLVLPQASGELVGRMEVLTLWPLSQGELEGKEEKFLDLLFSPAFPPPDGWRLCPWRSGCLEVGFPRP
SIO_010081: AV541_RS12805
subclass of: SO_0000673
so part of: AV541_RS12805
location: 41971..42486
location: region:41971-42486:1
so has part: feature:41971-42486:1:exon

WP_244880708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41971-42486:1:exon

AV541_RS12810
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12810
so part of: sequence
location: 42438..43184
location: region:42438-43184:1
so has part: feature:42438-43184:1:exon
subclass of: SO_0000010

position:42438:1
position: 42438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43184:1
position: 43184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42438-43184:1:exon

AV541_RS12810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12810
inference: COORDINATES: protein motif:HMM:NF025019.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4143 domain-containing protein
translation: MSLEERVFRGGFPEAVTRKGRRRQAWFEAYLKALLERDLRDLSRIHRLLEVPKVLGLLALRLGSPMNQSEVARGAGLPLSTLRDYLALLEALFLVVRVPAWTPGGEGRLVKAPKLYFVDSGLAASLLRYGGLALDQASSFGPLLENFVVLEILKGLGWSQVAPNLYHFRTHTGQEVDLVLEWEGRVVGLEVKASRTLGLRDFSGLKALRSLAKDRFLRGVVLYGGEEILAVERDLLAVPIQALWRLTA
SIO_010081: AV541_RS12810
subclass of: SO_0000673
so part of: AV541_RS12810
location: 42438..43184
location: region:42438-43184:1
so has part: feature:42438-43184:1:exon

WP_244880709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42438-43184:1:exon

AV541_RS13215
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS13215
so part of: sequence
location: complement(43290..43424)
location: region:43290-43424:-1
so has part: feature:43290-43424:-1:exon
subclass of: SO_0000010

position:43290:-1
position: 43290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43424:-1
position: 43424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43290-43424:-1:exon

AV541_RS13215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS13215
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDGGLVLALREGLSVAEVPLDEAAEAFLGLRRAFDFLQALKAIP
SIO_010081: AV541_RS13215
subclass of: SO_0000673
so part of: AV541_RS13215
location: complement(43290..43424)
location: region:43290-43424:-1
so has part: feature:43290-43424:-1:exon

WP_008633610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43290-43424:-1:exon

AV541_RS11515
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS11515
pseudo: true
so part of: sequence
location: 44362..45257
location: region:44362-45257:1
so has part: feature:44362-45257:1:exon
subclass of: SO_0000010

position:44362:1
position: 44362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45257:1
position: 45257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44362-45257:1:exon

AV541_RS11515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS11515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012975283.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: AV541_RS11515
subclass of: SO_0000673
so part of: AV541_RS11515
location: 44362..45257
location: region:44362-45257:1
so has part: feature:44362-45257:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44362-45257:1:exon

AV541_RS10420
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10420
old locus tag: AV541_10425
so part of: sequence
location: 45315..45635
location: region:45315-45635:1
so has part: feature:45315-45635:1:exon
subclass of: SO_0000010

position:45315:1
position: 45315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45635:1
position: 45635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45315-45635:1:exon

AV541_RS10420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10420
old locus tag: AV541_10425
EC number: 1.14.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630458.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antibiotic biosynthesis monooxygenase
translation: MFVTMNRIPVRPEYAEQFEEAFRQRARLVDRMPGFIRNLVLRPKDPGDPYVVMTLWESEEAFRAWTESPAFKEGHARSGTLPKEAFLGPSRLEAFEVVLDSEGQDA
SIO_010081: AV541_RS10420
subclass of: SO_0000673
so part of: AV541_RS10420
location: 45315..45635
location: region:45315-45635:1
so has part: feature:45315-45635:1:exon

WP_014630458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45315-45635:1:exon

AV541_RS10425
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10425
old locus tag: AV541_10430
so part of: sequence
location: 45628..45822
location: region:45628-45822:1
so has part: feature:45628-45822:1:exon
subclass of: SO_0000010

position:45628:1
position: 45628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45822:1
position: 45822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45628-45822:1:exon

AV541_RS10425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10425
old locus tag: AV541_10430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008633607.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKASLFGRREGTGEGARPPFPADPAQSPVPRRAHLKAALLLLLLDRPSPEGPKAPSETQGGKR
SIO_010081: AV541_RS10425
subclass of: SO_0000673
so part of: AV541_RS10425
location: 45628..45822
location: region:45628-45822:1
so has part: feature:45628-45822:1:exon

WP_060384863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45628-45822:1:exon

AV541_RS11520
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS11520
pseudo: true
so part of: sequence
location: complement(46020..>46118)
location: region:46020-46118:-1
so has part: feature:46020-46118:-1:exon
subclass of: SO_0000010

position:46020:-1
position: 46020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46118:-1
position: 46118
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46020-46118:-1:exon

AV541_RS11520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS11520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008630619.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: AV541_RS11520
subclass of: SO_0000673
so part of: AV541_RS11520
location: complement(46020..>46118)
location: region:46020-46118:-1
so has part: feature:46020-46118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46020-46118:-1:exon

AV541_RS11630
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS11630
so part of: sequence
location: 46743..46919
location: region:46743-46919:1
so has part: feature:46743-46919:1:exon
subclass of: SO_0000010

position:46743:1
position: 46743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46919:1
position: 46919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46743-46919:1:exon

AV541_RS11630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS11630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008633605.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKTKEPRLKALLKSPEWRRLAEAMALEPPEGPKPRFKPWRPRVKGVPLDAVLQDLRR
SIO_010081: AV541_RS11630
subclass of: SO_0000673
so part of: AV541_RS11630
location: 46743..46919
location: region:46743-46919:1
so has part: feature:46743-46919:1:exon

WP_167345978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46743-46919:1:exon

AV541_RS10430
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10430
old locus tag: AV541_10435
so part of: sequence
location: 46891..47367
location: region:46891-47367:1
so has part: feature:46891-47367:1:exon
subclass of: SO_0000010

position:46891:1
position: 46891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47367:1
position: 47367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46891-47367:1:exon

AV541_RS10430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10430
old locus tag: AV541_10435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008633604.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MPSSRTSGAEPLFLDTSVLVRLYYLEPEDPFEWAVDLAQRPGTLLAASHLAYVETLATFHALRRGRAITSRRQASLSAAFRADWPAFLRVPLSPPVVQLAGALAEEHPLRGADALQLASFAWLWEKEGKGRFFTLDRRLYLVARDLVPTVPVPAFEEV
SIO_010081: AV541_RS10430
subclass of: SO_0000673
so part of: AV541_RS10430
location: 46891..47367
location: region:46891-47367:1
so has part: feature:46891-47367:1:exon

WP_008633604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46891-47367:1:exon

AV541_RS10435
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10435
old locus tag: AV541_10440
pseudo: true
so part of: sequence
location: 47430..48310
location: region:47430-48310:1
so has part: feature:47430-48310:1:exon
subclass of: SO_0000010

position:47430:1
position: 47430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48310:1
position: 48310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47430-48310:1:exon

AV541_RS10435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10435
old locus tag: AV541_10440
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
SIO_010081: AV541_RS10435
subclass of: SO_0000673
so part of: AV541_RS10435
location: 47430..48310
location: region:47430-48310:1
so has part: feature:47430-48310:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47430-48310:1:exon

AV541_RS10440
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10440
old locus tag: AV541_10445
so part of: sequence
location: complement(48715..49149)
location: region:48715-49149:-1
so has part: feature:48715-49149:-1:exon
subclass of: SO_0000010

position:48715:-1
position: 48715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49149:-1
position: 49149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48715-49149:-1:exon

AV541_RS10440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10440
old locus tag: AV541_10445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630468.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MRGYGVVVVDTPPALRSEALEAVLRAADYAVLPTPPAPLDLEALVETVRRAIRPLGVAHRVLLTRVDPRSLGEALEAQTALMEAGVPAFHAFVRAYKAHERAALDGKPITRWRGPNAREAEADYRRVAEELLRELARTPERREA
SIO_010081: AV541_RS10440
subclass of: SO_0000673
so part of: AV541_RS10440
location: complement(48715..49149)
location: region:48715-49149:-1
so has part: feature:48715-49149:-1:exon

WP_060384864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48715-49149:-1:exon

AV541_RS10445
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10445
old locus tag: AV541_10450
so part of: sequence
location: complement(49207..49662)
location: region:49207-49662:-1
so has part: feature:49207-49662:-1:exon
subclass of: SO_0000010

position:49207:-1
position: 49207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49662:-1
position: 49662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49207-49662:-1:exon

AV541_RS10445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10445
old locus tag: AV541_10450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014511107.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MPPSPVRLHRLFLDANVLFAACWQEGRAQALLELAPRAKVLLLTSPHALEEARRNLEAKRPEALECLQRIRERVQTVPEAPMALVRKALAEGLPLKDAPILAAAWKAGAEALVTGDRRHFGHLMGKRVRGLWVVSLAEALAGVMGLLEDKG
SIO_010081: AV541_RS10445
subclass of: SO_0000673
so part of: AV541_RS10445
location: complement(49207..49662)
location: region:49207-49662:-1
so has part: feature:49207-49662:-1:exon

WP_008633600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49207-49662:-1:exon

AV541_RS10450
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10450
old locus tag: AV541_10455
so part of: sequence
location: complement(49643..49885)
location: region:49643-49885:-1
so has part: feature:49643-49885:-1:exon
subclass of: SO_0000010

position:49643:-1
position: 49643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49885:-1
position: 49885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49643-49885:-1:exon

AV541_RS10450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10450
old locus tag: AV541_10455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008633599.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MELAKLSRKGQLSIPKRLLKALGVEGEAYFLVELAPEGGLLLRPAGVYPLEVYTEERLQELLAEDTLTEEERARLAALAR
SIO_010081: AV541_RS10450
subclass of: SO_0000673
so part of: AV541_RS10450
location: complement(49643..49885)
location: region:49643-49885:-1
so has part: feature:49643-49885:-1:exon

WP_008633599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49643-49885:-1:exon

AV541_RS10455
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10455
old locus tag: AV541_10460
so part of: sequence
location: complement(49995..51119)
location: region:49995-51119:-1
so has part: feature:49995-51119:-1:exon
subclass of: SO_0000010

position:49995:-1
position: 49995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51119:-1
position: 51119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49995-51119:-1:exon

AV541_RS10455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10455
old locus tag: AV541_10460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008630830.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MRGALAAGSARVSEMVASLPSPLQNRFHQAKALYRFLSNPRVEAEALLDRVYQESATALEGEEVLVLLDLSPVVKPYARALEGIARVGKDRRPGYELLTALGLDPAGRLALGYAHLVAYGERGFASLPKEVEGAIEAARERLGGVGRRLVYVADRGFDDRKVFGQVLALGEEFVVRVYRDRKLGEGGSLAKVASSLALPCGEEVELRVGGRYQRVRLHFGWREVEVEGRRLHLVVCRVPALGRRGEWWLLTSLPVRGREEAARVVEAYRRRWEVERFFRLLKTGLGLETFQVRGLARIRKVVAVLLGLAVFLWEVERLGDPFKGFLLQLGGKLGLPSERDGPYLLLRGLVRLLNYEVTQELLKQAKGGRGRSFG
SIO_010081: AV541_RS10455
subclass of: SO_0000673
so part of: AV541_RS10455
location: complement(49995..51119)
location: region:49995-51119:-1
so has part: feature:49995-51119:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49995-51119:-1:exon

AV541_RS10460
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10460
old locus tag: AV541_10465
so part of: sequence
location: complement(51226..52539)
location: region:51226-52539:-1
so has part: feature:51226-52539:-1:exon
subclass of: SO_0000010

position:51226:-1
position: 51226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52539:-1
position: 52539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51226-52539:-1:exon

AV541_RS10460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10460
old locus tag: AV541_10465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011228558.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MFNRGAHLSTRRCPVDQDTLRILLREAVRETVAEVLQTVLELDRTAFLQVHGGRRNGYYPRKLETTFGQVDLKVPRDRESRYYPAFLKPYARRLVDVGEVAVALYAAGVSQRKAAEILSLLLGHRYSHETLSALTDEVLEAAGAFRTRPLPEEMAFVYLDGLSLKVFREGEGIVRESVYVALGIAPNGERRVLGFWLLPTESALGWEGVLGELWQRGLRRVLLFITDGLPGLPEAIRRVYPQAEWQRCVVHGVRWSLSQVRARDRGLLAEDLRRVYGAESREEALGALEEVKAAWGSRYPGVVGLWVQDSGAFLRFYGYPKVLWPYLRSTNLMERFIREVRRGTKVRDHKFPKEEAVYKLLYLESERQAASRSEHLAGRWAERKLKGFSEVKEVLEKMLQERYAPRTQTLTHNRTLPTSPFRGKSPLAGAARIWYRG
SIO_010081: AV541_RS10460
subclass of: SO_0000673
so part of: AV541_RS10460
location: complement(51226..52539)
location: region:51226-52539:-1
so has part: feature:51226-52539:-1:exon

WP_167345979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51226-52539:-1:exon

AV541_RS10465
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10465
old locus tag: AV541_10470
so part of: sequence
location: 52830..53783
location: region:52830-53783:1
so has part: feature:52830-53783:1:exon
subclass of: SO_0000010

position:52830:1
position: 52830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53783:1
position: 53783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52830-53783:1:exon

AV541_RS10465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10465
old locus tag: AV541_10470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011228296.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MTFAGIDVSKPHLDLALVSNSPKPTRLRFPNTPEGRQALLAALAHHNPAWVALEPTGPYHLPLLRLLAEKGLPVALVNPYHLAAFRKAKGERNKTDRQDALLLARYAQVYHEDLRAYTLPPETLQTLKALVGYREDLAGREQAILNQMEAAEWAGSREVLALLQKELSCVKALLGEVEARIQALLAALPEAEVLMGLPGVGPQVAAAVLALLPPELWGRAKAAASYAGLIPEREESGKSVERGRLSRKGPPLLRRKLYMGALVAVRHDPEMRAFYHRLLSRGKTKKQALLAVAHKLLRRMMGRLREYYAGQPAQGVA
SIO_010081: AV541_RS10465
subclass of: SO_0000673
so part of: AV541_RS10465
location: 52830..53783
location: region:52830-53783:1
so has part: feature:52830-53783:1:exon

WP_060384865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52830-53783:1:exon

AV541_RS10470
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10470
old locus tag: AV541_10475
so part of: sequence
location: 53814..55034
location: region:53814-55034:1
so has part: feature:53814-55034:1:exon
subclass of: SO_0000010

position:53814:1
position: 53814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55034:1
position: 55034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53814-55034:1:exon

AV541_RS10470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10470
old locus tag: AV541_10475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011228558.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256-like element ISTth4 family transposase
translation: MFNRGAHLSTRRCPVDQDTLRILLREAVRETVAEVLQTVLELDRTAFLQVHGGRRNGYYPRKLETTFGQVDLKVPRDRESRYYPAFLKPYARRLVDVGEVAVALYAAGVSQRKAAEILSLLLGHRYSHETLSALTDEVLEAAGAFRTRPLPEEMAFVYLDGLSLKVFREGEGIVRESVYVALGIAPNGERRVLGFWLLPTESALGWEGVLGELWQRGLRRVLLFITDGLPGLPEAIRRVYPQAEWQRCVVHGVRWSLSQVRARDRGLLAEDLRRVYGAESREEALGALEEVKAAWGSRYPGVVGLWVQDSGAFLRFYGYPKVLWPYLRSTNLMERFIRELRRGTKVRDHKFPKAEAVYKLLYLESERQEGRWAERKLKGFSEVKEVLEKMLQERYAPRTQTLTHNS
SIO_010081: AV541_RS10470
subclass of: SO_0000673
so part of: AV541_RS10470
location: 53814..55034
location: region:53814-55034:1
so has part: feature:53814-55034:1:exon

WP_060384866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53814-55034:1:exon

AV541_RS10475
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10475
old locus tag: AV541_10480
pseudo: true
so part of: sequence
location: complement(55372..>55713)
location: region:55372-55713:-1
so has part: feature:55372-55713:-1:exon
subclass of: SO_0000010

position:55372:-1
position: 55372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55713:-1
position: 55713
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55372-55713:-1:exon

AV541_RS10475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10475
old locus tag: AV541_10480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011228296.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: AV541_RS10475
subclass of: SO_0000673
so part of: AV541_RS10475
location: complement(55372..>55713)
location: region:55372-55713:-1
so has part: feature:55372-55713:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55372-55713:-1:exon

AV541_RS10480
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10480
old locus tag: AV541_10485
so part of: sequence
location: complement(55729..56142)
location: region:55729-56142:-1
so has part: feature:55729-56142:-1:exon
subclass of: SO_0000010

position:55729:-1
position: 55729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56142:-1
position: 56142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55729-56142:-1:exon

AV541_RS10480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10480
old locus tag: AV541_10485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011174362.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MIPERLVLDAGPLIALLHRSDPDHEEAVRGFRRLAEGGARLFLPMPVLFEVFKWLLFQAGPKAAREGLAKVEEGVVVVPFTLEDLEEVRLLLTRLPGWGGTLEDAGVALLALRLGAPVWTLNYRDLGAFPALRFWTP
SIO_010081: AV541_RS10480
subclass of: SO_0000673
so part of: AV541_RS10480
location: complement(55729..56142)
location: region:55729-56142:-1
so has part: feature:55729-56142:-1:exon

WP_060384868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55729-56142:-1:exon

AV541_RS10485
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10485
old locus tag: AV541_10490
so part of: sequence
location: complement(56139..56354)
location: region:56139-56354:-1
so has part: feature:56139-56354:-1:exon
subclass of: SO_0000010

position:56139:-1
position: 56139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56354:-1
position: 56354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56139-56354:-1:exon

AV541_RS10485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10485
old locus tag: AV541_10490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013012854.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix protein, CopG family
translation: MRVTIYLPDHLAQEVEAYRKARPGLSLSALVRELLERELVKRPEALLEVAGLVERAELSAREHDALIREER
SIO_010081: AV541_RS10485
subclass of: SO_0000673
so part of: AV541_RS10485
location: complement(56139..56354)
location: region:56139-56354:-1
so has part: feature:56139-56354:-1:exon

WP_008631365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56139-56354:-1:exon

AV541_RS13220
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS13220
old locus tag: AV541_10495
so part of: sequence
location: 56445..56633
location: region:56445-56633:1
so has part: feature:56445-56633:1:exon
subclass of: SO_0000010

position:56445:1
position: 56445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56633:1
position: 56633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56445-56633:1:exon

AV541_RS13220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS13220
old locus tag: AV541_10495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008633013.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLEGGGAWATAEVQVEALPARVVLSACSEGGACRSLALPREGGPFRLEGLSLAAKLLRYFC
SIO_010081: AV541_RS13220
subclass of: SO_0000673
so part of: AV541_RS13220
location: 56445..56633
location: region:56445-56633:1
so has part: feature:56445-56633:1:exon

WP_008633013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56445-56633:1:exon

AV541_RS10495
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10495
old locus tag: AV541_10500
so part of: sequence
location: 56718..57527
location: region:56718-57527:1
so has part: feature:56718-57527:1:exon
subclass of: SO_0000010

position:56718:1
position: 56718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57527:1
position: 57527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56718-57527:1:exon

AV541_RS10495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10495
old locus tag: AV541_10500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013704078.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQQDREHPLYYLDAETLLVATYIWVDDELKALQAQDFKLPPKQKHQKATLAELLTLAIFLLLQGQDLAKGYLAAKTTLKAYFPFLPHLSRFYRVLQKAQGLLAHLAMRLSGGQGLLQVVDLKPIPLAHGHRIHGLSLPEAAMGVGPLGAFAGYVLMPVMNERGLFFRWAILPGNARETWGRDLLDGLPAVLGDRGFRWVQGVKTPPYRVRGGRVRNWIETRFSVMVRSLGLHRIEARSYWGLVARVNLILLVHNLIRSRVLLRMAGVEL
SIO_010081: AV541_RS10495
subclass of: SO_0000673
so part of: AV541_RS10495
location: 56718..57527
location: region:56718-57527:1
so has part: feature:56718-57527:1:exon

WP_060384869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56718-57527:1:exon

AV541_RS10500
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10500
old locus tag: AV541_10505
so part of: sequence
location: 57964..58776
location: region:57964-58776:1
so has part: feature:57964-58776:1:exon
subclass of: SO_0000010

position:57964:1
position: 57964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58776:1
position: 58776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57964-58776:1:exon

AV541_RS10500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10500
old locus tag: AV541_10505
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: recombinase XerD
translation: MREGLGLEVWDHPEERRRVVGEALARWDEGALKEALWAYLVRHRKKPDRAAPHYVGYFVRWLALKGRRWPHLEPEDPKAFLLEAKEKGFPGGERGPLSWGTVERARASLRHLFPFLDWAGHPMPSHVRLPSRQELPVVAPSRAMPEEAYQDLLEKAGAYPLAYWRPLLRVLLVLLGEVGLTVKEVADLWKEDVREKSLLVRGTKLREVPLSPSPGRSSPTGSPRGPSSPPTSPSPTPTSSSSPPRGRTGGSPLAWRRPSGSSPSSRTSPG
SIO_010081: AV541_RS10500
subclass of: SO_0000673
so part of: AV541_RS10500
location: 57964..58776
location: region:57964-58776:1
so has part: feature:57964-58776:1:exon

WP_244880710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57964-58776:1:exon

AV541_RS12820
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12820
so part of: sequence
location: 58773..58925
location: region:58773-58925:1
so has part: feature:58773-58925:1:exon
subclass of: SO_0000010

position:58773:1
position: 58773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58925:1
position: 58925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58773-58925:1:exon

AV541_RS12820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12820
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAEGKRRADLALPLRWRAIRRFLKEGHPREKVAYWTGMKSLVVPGWGEE
SIO_010081: AV541_RS12820
subclass of: SO_0000673
so part of: AV541_RS12820
location: 58773..58925
location: region:58773-58925:1
so has part: feature:58773-58925:1:exon

WP_244880711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58773-58925:1:exon

AV541_RS10505
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10505
old locus tag: AV541_10510
so part of: sequence
location: 59157..59774
location: region:59157-59774:1
so has part: feature:59157-59774:1:exon
subclass of: SO_0000010

position:59157:1
position: 59157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59774:1
position: 59774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59157-59774:1:exon

AV541_RS10505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10505
old locus tag: AV541_10510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630479.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
translation: MSRHEKERELYRMALAQGGVFTLDQARRYGIDRKGASYRVRTGLWERLARGIYRLSFAPLSQDEDLVRIALWASSYRGLVAFSHETALALHGLSDLLPDRYHLTVPRGFSRKPRWQVVLHRRDLAPADTEERPGYRVTTPLRTLLDVAETSRVPEEQLWLAVHQALDRGLVSQKRLEAALPGLSVRARARLLRALRSHALGAVSA
SIO_010081: AV541_RS10505
subclass of: SO_0000673
so part of: AV541_RS10505
location: 59157..59774
location: region:59157-59774:1
so has part: feature:59157-59774:1:exon

WP_038035114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59157-59774:1:exon

AV541_RS10510
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10510
old locus tag: AV541_10515
so part of: sequence
location: 59876..60676
location: region:59876-60676:1
so has part: feature:59876-60676:1:exon
subclass of: SO_0000010

position:59876:1
position: 59876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60676:1
position: 60676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59876-60676:1:exon

AV541_RS10510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10510
old locus tag: AV541_10515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630480.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyl transferase AbiEii/AbiGii toxin family protein
translation: MTIERFLARLYAKGAIPFVVVGAFALATLLGRRRTTQDLNLEAWESIPDPLEFPQDAAARDLGDGFLFRVRERQRDRTSGVRRFTLTARLGGRLFEEVALDVHVSGSVGLDPVRARFGPVIELEGLEPPEVPMAPLAWQYANKPHAYLRERASRQKTRVKDLVDLAILTIELAEEADPQTLARTIERVYGIHGGRPGRDFPDPPAAWRREFHTMAREAGPEPPGRDFWRGRITALLEAFRALIQELHAPGLSLPGGRVAVPVLRRP
SIO_010081: AV541_RS10510
subclass of: SO_0000673
so part of: AV541_RS10510
location: 59876..60676
location: region:59876-60676:1
so has part: feature:59876-60676:1:exon

WP_038035115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59876-60676:1:exon

AV541_RS12825
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12825
so part of: sequence
location: complement(60600..61895)
location: region:60600-61895:-1
so has part: feature:60600-61895:-1:exon
subclass of: SO_0000010

position:60600:-1
position: 60600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61895:-1
position: 61895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60600-61895:-1:exon

AV541_RS12825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12825
inference: COORDINATES: protein motif:HMM:NF024117.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3'-5' exonuclease
translation: MAARLPQGRRRVKDWEGTLDLVRKLEVGSEDPFLVARHLRLLLRSGLSVERPPLEAGEAVTLLTVHGAKGLEWPVVFVLNVGGWNRLGSWKNNKTKPLFRPGLALVPPVLDEKGNPSALFHLAKRRVEEEEKQEENRLLYVAATRASERLYLLLSPDLSPDKGDLDPQTLIGAGSLEKGLEATEPERPWSGEEGEVEVLEERIQGLPLEALPVSLLPLAARDPEAARRRLLGEPEAEGGEAWMPEDPQETEEEVPGGAGVGRMTHALLERFEALEDLEREGRAFLEESFPGAEGEEVEEALRLARTFLTAEVFAPYRGNAVAKEVPVALELLGVRLEGRADRVGEDWVLDYKTDRGVDAEAYLLQVGVYALALGKPRALVADLREGKLYEGASQQVEEKAEEVLRRLMGGEGQGRQPYPLAATDPGHGAPG
SIO_010081: AV541_RS12825
subclass of: SO_0000673
so part of: AV541_RS12825
location: complement(60600..61895)
location: region:60600-61895:-1
so has part: feature:60600-61895:-1:exon

WP_244880712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60600-61895:-1:exon

AV541_RS12830
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12830
so part of: sequence
location: complement(61859..63691)
location: region:61859-63691:-1
so has part: feature:61859-63691:-1:exon
subclass of: SO_0000010

position:61859:-1
position: 61859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63691:-1
position: 63691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61859-63691:-1:exon

AV541_RS12830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12830
inference: COORDINATES: protein motif:HMM:NF012789.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UvrD-helicase domain-containing protein
translation: MEANLYVAGAGTGKTYTLAERYLGFLEEGLSPLQVVAVTFTERAALELRHRVRQMVGERSLGHKERVLAELEAAPIGTLHALAARVCREFPEEAGVPADFQVMEDLEAALLLEAWLEEALLEALQDPRYAPLVEAVGYEGLLDTLREVAKDPLAARELLEKGLGEVAKALRLEAWRGLRRRMEELFHGERPEERYPGFPKGWRAEEPEVVPDLLAWAGEVKFNKKPWLEYKDDPALKRLLKLLGGVKEGFSPGPADERLEEVWPLLRELAEGVLARLEERRFRARRLGYADLEVHALRALEEEEVRAYYRGRFRRLLVDEFQDTNPVQVRLLQALFPDLRAWTVVGDPNQSIYSFRRADPKVMERFQIEAAKEGLRVRRLEKSHRYHQGLADFHNRFFPPLLPGYGAVSAERKPEGEGPWVFHFQGDLEAQARFIAQEVGRLLSEGFQVYDLGEKAYRPMSLRDVAVLGRTWRDLARVAEALRRLEVPAVEAGGGNLLETRAFKDAYLALRFLGDPRDEEALVGLLRSPFFALTDGEVRRLAEARGKGRPYGRFWNGRGTFPPRPKGPGRRSGASSGARLSRPQADSFSAWTGPRATRGWPPVSPRAGGG
SIO_010081: AV541_RS12830
subclass of: SO_0000673
so part of: AV541_RS12830
location: complement(61859..63691)
location: region:61859-63691:-1
so has part: feature:61859-63691:-1:exon

WP_244880713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61859-63691:-1:exon

AV541_RS12835
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12835
so part of: sequence
location: complement(63695..63988)
location: region:63695-63988:-1
so has part: feature:63695-63988:-1:exon
subclass of: SO_0000010

position:63695:-1
position: 63695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63988:-1
position: 63988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63695-63988:-1:exon

AV541_RS12835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12835
inference: COORDINATES: protein motif:HMM:NF024117.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PD-(D/E)XK nuclease family protein
translation: MKDPKTGALRIDLQLSLYILLHGGGRGRGVYYSLTTGKHDLVPKSLKDGRSWADALREVLRGAHGVLRDGAFEPRPDAEAEACRSCPVELLCRYEGR
SIO_010081: AV541_RS12835
subclass of: SO_0000673
so part of: AV541_RS12835
location: complement(63695..63988)
location: region:63695-63988:-1
so has part: feature:63695-63988:-1:exon

WP_244880714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63695-63988:-1:exon

AV541_RS12840
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12840
so part of: sequence
location: complement(63985..64395)
location: region:63985-64395:-1
so has part: feature:63985-64395:-1:exon
subclass of: SO_0000010

position:63985:-1
position: 63985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64395:-1
position: 64395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63985-64395:-1:exon

AV541_RS12840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12840
inference: COORDINATES: protein motif:HMM:NF024117.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PD-(D/E)XK nuclease family protein
translation: MGTFVHQVLARVFRTALEKDARRGEEVRALAAGGLLEEAFSRVEEEWKGRPNPPFFLRRPDWPHRRRRVLRLLARAFEDDEQFLKGDAEIVAVEEAFARAAPELGGLEVRGTIDRLERRSGSHFYLDYKLGSTFPE
SIO_010081: AV541_RS12840
subclass of: SO_0000673
so part of: AV541_RS12840
location: complement(63985..64395)
location: region:63985-64395:-1
so has part: feature:63985-64395:-1:exon

WP_244880720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63985-64395:-1:exon

AV541_RS13225
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS13225
so part of: sequence
location: complement(64314..65897)
location: region:64314-65897:-1
so has part: feature:64314-65897:-1:exon
subclass of: SO_0000010

position:64314:-1
position: 64314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65897:-1
position: 65897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64314-65897:-1:exon

AV541_RS13225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS13225
inference: COORDINATES: protein motif:HMM:NF024117.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PD-(D/E)XK nuclease family protein
translation: MEVLPRAAALGKRLPLRLWHYPYLGTGELAFLKGVAAPGSEVELLLPEGAWGEANRRAKEALEEVGLKVRPLELTGLGRAFLQGRGLQGREADRVQALRFPDMEAEVRHVLASLKGLLREGLSPGEVALVARDDRRYGPLVAAVGFDQGLPVRLLYRVPVGESRVGSLAALLAQALQDFPYEATLRLLFHPLFPWERKVDLDQARLRRPSGEAWKGLGLPGELLELAQGKTGGELVQGLRRALSPLRKRLEGWPRERAALEALLEGLGELEEEDREGFFQGISELLYHLTVPAQPGYGGVELHTPLARYGGAFRHLFVLGMAEGLTPVPVAEDPFLGLSEVEELERFGLFPEKPWEAAAREALVFAALLGSLKEDGEAVLTYPEVVEGRPVPMSPFLERLGLEPRSPGRTLVGSLVEARRLGLWEGDPLQEAMERALEAERARLEGEASSPHHGATGRPFLPASLSVSQLEDLATCPFRFYAKHLLRPRGTGRRGTGTGRTWEPSSTRYSPASSGPRWRRTHGGARR
SIO_010081: AV541_RS13225
subclass of: SO_0000673
so part of: AV541_RS13225
location: complement(64314..65897)
location: region:64314-65897:-1
so has part: feature:64314-65897:-1:exon

WP_276325523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64314-65897:-1:exon

AV541_RS13230
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS13230
so part of: sequence
location: complement(65849..66277)
location: region:65849-66277:-1
so has part: feature:65849-66277:-1:exon
subclass of: SO_0000010

position:65849:-1
position: 65849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66277:-1
position: 66277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65849-66277:-1:exon

AV541_RS13230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS13230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRAEDPGLIHVTPNRAVARRLGVPYRTLAGLARELLRDGGLLVASPYRARRLLVQAVREALAPKDPQGLAAALEGPVRTLLLLAQASGQGEEALARLAKGASPGLPGWPGRPGATGSCSGAGGSWTPWRSFRGRRPWGSGFP
SIO_010081: AV541_RS13230
subclass of: SO_0000673
so part of: AV541_RS13230
location: complement(65849..66277)
location: region:65849-66277:-1
so has part: feature:65849-66277:-1:exon

WP_276325524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65849-66277:-1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 456163
inference: COORDINATES: alignment:crt:1.2
inference: COORDINATES: alignment:pilercr:v1.02
rpt family: CRISPR
rpt type: direct
rpt unit range: 66526..66562
rpt unit seq: gtttcaatcctcaccggccctttcgggccggtgcaac
so part of: sequence
location: 66526..67226
location: region:66526-67226:1
so has part: feature:66526-67226:1:region

position:66526:1
position: 66526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67226:1
position: 67226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66526-67226:1:region

AV541_RS10525
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10525
old locus tag: AV541_10530
so part of: sequence
location: 67463..68416
location: region:67463-68416:1
so has part: feature:67463-68416:1:exon
subclass of: SO_0000010

position:67463:1
position: 67463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68416:1
position: 68416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67463-68416:1:exon

AV541_RS10525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10525
old locus tag: AV541_10530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011228296.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MTFAGIDVSKPHLDLALVSNSPKPTRLRFPNTPEGRQALLAALAHHNPAWVALEPTGPYHLPLLRLLAEKGLPVALVNPYHLAAFRKAKGERNKTDRQDALLLARYAQVYHEDLRAYTLPPETLQTLKALVGYREDLAGREQAILNQMEAAEWAGSREVLALLQKELSCVKALLGEVEARIQALLAALPEAEVLMGLPGVGPQVAAAVLALLPPELWGRAKAAASYAGLIPEREESGKSVERGRLSRKGPPLLRRKLYMGALVAVRHDPEMRAFYHRLLSRGKTKKQALLAVAHKLLRRMMGRLREYYAGQPAQGVA
SIO_010081: AV541_RS10525
subclass of: SO_0000673
so part of: AV541_RS10525
location: 67463..68416
location: region:67463-68416:1
so has part: feature:67463-68416:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67463-68416:1:exon

AV541_RS10530
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10530
old locus tag: AV541_10535
pseudo: true
so part of: sequence
location: complement(69206..70527)
location: region:69206-70527:-1
so has part: feature:69206-70527:-1:exon
subclass of: SO_0000010

position:69206:-1
position: 69206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70527:-1
position: 70527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69206-70527:-1:exon

AV541_RS10530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10530
old locus tag: AV541_10535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008631376.1
GO function: GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cobyrinate a,c-diamide synthase
SIO_010081: AV541_RS10530
subclass of: SO_0000673
so part of: AV541_RS10530
location: complement(69206..70527)
location: region:69206-70527:-1
so has part: feature:69206-70527:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:69206-70527:-1:exon

AV541_RS10535
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
gene: cobO
locus tag: AV541_RS10535
old locus tag: AV541_10540
so part of: sequence
location: complement(70527..71090)
location: region:70527-71090:-1
so has part: feature:70527-71090:-1:exon
subclass of: SO_0000010

position:71090:-1
position: 71090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70527-71090:-1:exon

AV541_RS10535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
gene: cobO
locus tag: AV541_RS10535
old locus tag: AV541_10540
EC number: 2.5.1.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008631380.1
GO function: GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cob(I)yrinic acid a,c-diamide adenosyltransferase
translation: MEEPKRQKPYAKPQGERRGLLLVYTGDGKGKSTAAFGLALRAHGRGLKVRIFQFIKHGTARFGEHRAFSLLGIPIEGLGDGFTWRSRDLARSAALAQEGWGRAKEALLSGTYDLVVLDEATYPLRYGWVSLEEFLEVLRARPPHVHVVVTGRGAPEALLELADTVTEMRKVKHAFDQGVPAQRGIEH
SIO_010081: AV541_RS10535
subclass of: SO_0000673
so part of: AV541_RS10535
location: complement(70527..71090)
location: region:70527-71090:-1
so has part: feature:70527-71090:-1:exon

WP_008631380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70527-71090:-1:exon

AV541_RS10540
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10540
old locus tag: AV541_10545
so part of: sequence
location: complement(71122..71658)
location: region:71122-71658:-1
so has part: feature:71122-71658:-1:exon
subclass of: SO_0000010

position:71122:-1
position: 71122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71658:-1
position: 71658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71122-71658:-1:exon

AV541_RS10540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10540
old locus tag: AV541_10545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011174549.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEDRLLERLEKLEGVVETTVAVLPPLIQDLSRRIDALREEVKAELREREARLEERFQGLEKRIQEVETKLESRIQNLEARLERQIQETETRLGTRIQEVEAKLERQIQETEAQLEARIHAVETKLEGRIQEVENRLEAQILALRQEMKAEIGSAFNRVMLYLTAVGVVLALLSVFFR
SIO_010081: AV541_RS10540
subclass of: SO_0000673
so part of: AV541_RS10540
location: complement(71122..71658)
location: region:71122-71658:-1
so has part: feature:71122-71658:-1:exon

WP_014630524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71122-71658:-1:exon

AV541_RS13235
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS13235
so part of: sequence
location: complement(71663..71809)
location: region:71663-71809:-1
so has part: feature:71663-71809:-1:exon
subclass of: SO_0000010

position:71663:-1
position: 71663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71809:-1
position: 71809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71663-71809:-1:exon

AV541_RS13235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS13235
EC number: 2.7.8.26
inference: COORDINATES: protein motif:HMM:NF014685.2
GO function: GO:0051073 - adenosylcobinamide-GDP ribazoletransferase activity [Evidence IEA]; GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenosylcobinamide-GDP ribazoletransferase
translation: MARLAWARLGGLNGDALGAMIALGEVVLLLAQALLGPAPSSRAGPGLP
SIO_010081: AV541_RS13235
subclass of: SO_0000673
so part of: AV541_RS13235
location: complement(71663..71809)
location: region:71663-71809:-1
so has part: feature:71663-71809:-1:exon

WP_235283792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71663-71809:-1:exon

AV541_RS10545
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10545
old locus tag: AV541_10550
so part of: sequence
location: complement(71749..72384)
location: region:71749-72384:-1
so has part: feature:71749-72384:-1:exon
subclass of: SO_0000010

position:71749:-1
position: 71749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72384:-1
position: 72384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71749-72384:-1:exon

AV541_RS10545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10545
old locus tag: AV541_10550
EC number: 2.7.8.26
inference: COORDINATES: protein motif:HMM:NF014685.2
GO function: GO:0051073 - adenosylcobinamide-GDP ribazoletransferase activity [Evidence IEA]; GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenosylcobinamide-GDP ribazoletransferase
translation: MLRDLRLALALLTVLPLAPKGVGEEDFKRSVAFFPLAGYLLGLPLALLALLPLPPGLSAALGVALLLGLTGFLHLDGLLDLADALLGARPREERLRILKDPHLGAFAFGVGGVYLLLLFQALALVQDPLFLLLFPGWARFAFLPFLHRYPLLGPGMAALVRGGPGPLPSFPPCPSSSSTPSPPSSPFSPPGGWPAWPGPASGGSTGTPLGP
SIO_010081: AV541_RS10545
subclass of: SO_0000673
so part of: AV541_RS10545
location: complement(71749..72384)
location: region:71749-72384:-1
so has part: feature:71749-72384:-1:exon

WP_276325519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71749-72384:-1:exon

AV541_RS10550
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10550
old locus tag: AV541_10555
so part of: sequence
location: complement(72385..74193)
location: region:72385-74193:-1
so has part: feature:72385-74193:-1:exon
subclass of: SO_0000010

position:72385:-1
position: 72385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74193:-1
position: 74193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72385-74193:-1:exon

AV541_RS10550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10550
old locus tag: AV541_10555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630525.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGRWELERAWDLLEEGDLLEALEHAERAYRRHPKDPEARFLYGYLRFTSDGAYEGLRLMELGAKAMGGEACAELWRIYGTEFPAHLLDLARFLERRGLPLPGDTAWAEAVLEEQGLPPEVAREVERWLYQEDIPSLEGFFRKRPSPYPGYLLVRLYLARGAFLRAQGLAGELGEAWGGDWRVELARLLARFPQEGPSLAEEVRPLLARRPKDPHLAEGLALLALGVGEGRVALELDRAFDPPLRARFPHLEEPLEAEEEGRPLVPLGLFLSPGRADVSPPPFAWEAFRSWLPRLGLGELTLWGRPFLRSGLLSPEDVRQEMREGVMRLRFLEEGRPPFVPLASLGELLGASPEEREAASAAASPGELAHFRKAFPDSLLLELYALLYRPFGDWPEGRVRRLLREELPWGVREALRLRLELGRDPLAPLSPPEPPPGDLWPEEFLFTWLLLAPPEEEVEEAFLVPPGNRAVNLDWLNVYPLRVRRLEAQRPWRKEPLPEGGGLEDWARRLPLSLRTFWLVELEVDEGMGLEDLLDPETLRDLLEGLAPGARSLLARLVREGRLPLSQAEEKALAQLERRFLAFVGAGEVGLPGDLRRALFRAL
SIO_010081: AV541_RS10550
subclass of: SO_0000673
so part of: AV541_RS10550
location: complement(72385..74193)
location: region:72385-74193:-1
so has part: feature:72385-74193:-1:exon

WP_014511293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72385-74193:-1:exon

AV541_RS10555
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
gene: cobT
locus tag: AV541_RS10555
old locus tag: AV541_10560
pseudo: true
so part of: sequence
location: complement(74216..75222)
location: region:74216-75222:-1
so has part: feature:74216-75222:-1:exon
subclass of: SO_0000010

position:74216:-1
position: 74216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75222:-1
position: 75222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74216-75222:-1:exon

AV541_RS10555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
gene: cobT
locus tag: AV541_RS10555
old locus tag: AV541_10560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014511292.1
GO function: GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
SIO_010081: AV541_RS10555
subclass of: SO_0000673
so part of: AV541_RS10555
location: complement(74216..75222)
location: region:74216-75222:-1
so has part: feature:74216-75222:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74216-75222:-1:exon

AV541_RS10560
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10560
old locus tag: AV541_10565
so part of: sequence
location: 75249..75782
location: region:75249-75782:1
so has part: feature:75249-75782:1:exon
subclass of: SO_0000010

position:75249:1
position: 75249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75782:1
position: 75782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75249-75782:1:exon

AV541_RS10560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10560
old locus tag: AV541_10565
EC number: 3.1.3.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008631398.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine phosphatase family protein
translation: MELWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSLPAFSSDLLRARRTAELAGFSPRLYPELREIHFGTLEGAPWETLDPRYKEALLRFQGFHPPGGESLSAFQERVFRFLEGLKAPAVLFTHGGVVRAVLRALGEDGLVPPGSAVAVDWPRRVLVRLALDGEEATG
SIO_010081: AV541_RS10560
subclass of: SO_0000673
so part of: AV541_RS10560
location: 75249..75782
location: region:75249-75782:1
so has part: feature:75249-75782:1:exon

WP_024119299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75249-75782:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 456163
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00174
inference: COORDINATES: profile:INFERNAL:1.1.4
note: cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: adenosylcobalamin
so part of: sequence
location: 75786..75952
location: region:75786-75952:1
so has part: feature:75786-75952:1:region

position:75786:1
position: 75786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75952:1
position: 75952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75786-75952:1:region

AV541_RS10565
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10565
old locus tag: AV541_10570
so part of: sequence
location: 76044..76706
location: region:76044-76706:1
so has part: feature:76044-76706:1:exon
subclass of: SO_0000010

position:76044:1
position: 76044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76706:1
position: 76706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76044-76706:1:exon

AV541_RS10565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10565
old locus tag: AV541_10570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630526.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nickel permease
translation: MTGLELLAVALGMRHGVDPDHLAAVDGLSRVRPSPLNGVLFALGHGGVVTLLAFPAASLLGRVDLEALHLPAFLLLLVAALNLYRLLKPAPPTPPKGLPLLNPLLLGVLFGLGFETASQLSALALSAELSPLRLGAFFTLGMLLVDGVDGLLASRLQNLAKDSQRAEEASRLLGWAVVAVALVLALAELGGVDLEAFALPLGLGLFGLLVSLRLYALRPA
SIO_010081: AV541_RS10565
subclass of: SO_0000673
so part of: AV541_RS10565
location: 76044..76706
location: region:76044-76706:1
so has part: feature:76044-76706:1:exon

WP_008631400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76044-76706:1:exon

AV541_RS10570
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10570
old locus tag: AV541_10575
so part of: sequence
location: 76703..77803
location: region:76703-77803:1
so has part: feature:76703-77803:1:exon
subclass of: SO_0000010

position:76703:1
position: 76703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77803:1
position: 77803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76703-77803:1:exon

AV541_RS10570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10570
old locus tag: AV541_10575
EC number: 2.1.1.195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008631402.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cobalt-precorrin-5B (C(1))-methyltransferase
translation: MSHPYPPPRDKKGSRIGFTTGANAAAAAKAAALALLGEAPEVVDIWLPAGWRQPFRVFRLERKGDGVLVGMIKDAGDDPDVTHGAEIQAFVRFASEDRLEGGEGVGVVTKPGLGVPVGEPAINPVPRRMIWEAVREVTERPLAVTIAIPGGEELAKKTLNPRLGILGGLSVLGTTGVVKPYSTSAFRMSVVQAVGVARANGLLEIAATTGGKSERFAQRLLPHLPEMAFIEMGDFVGDVLRAARKVGVEVVRVVGMIGKISKMADGKTMTHAAGGEVNLSLLLSLLKEAGASPKALKEAEGAATARRFLEIALEEGLELFFVNLVRLAQEKLQAYIGERPFVSVALTDFDEGRCLAAWPDREVYRG
SIO_010081: AV541_RS10570
subclass of: SO_0000673
so part of: AV541_RS10570
location: 76703..77803
location: region:76703-77803:1
so has part: feature:76703-77803:1:exon

WP_008631402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76703-77803:1:exon

AV541_RS10575
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10575
old locus tag: AV541_10580
so part of: sequence
location: 77796..78494
location: region:77796-78494:1
so has part: feature:77796-78494:1:exon
subclass of: SO_0000010

position:77796:1
position: 77796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78494:1
position: 78494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77796-78494:1:exon

AV541_RS10575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10575
old locus tag: AV541_10580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630527.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: precorrin-8X methylmutase
translation: MDDLIKAQKNPAHQMTEKGRAIEEESFRIVDEEAGPHGFSPLEWPVVRRMIHATADFEYKALTRFSQGAVEAGLKAIQAGARILVDARMIACGLNPERLRLFGNEVVELLAHPEVVARAKATGGTRAEAAVAYAWEKGLLDGAIVGVGNAPTFLLALVEAIRQGARPALVLGMPVGFVNVLEAKRALMEAPVPWIVTEGRKGGSTLVVAALHALIRLAADGGVDTSRAYREG
SIO_010081: AV541_RS10575
subclass of: SO_0000673
so part of: AV541_RS10575
location: 77796..78494
location: region:77796-78494:1
so has part: feature:77796-78494:1:exon

WP_014511290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77796-78494:1:exon

AV541_RS10580
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10580
old locus tag: AV541_10585
so part of: sequence
location: 78495..79706
location: region:78495-79706:1
so has part: feature:78495-79706:1:exon
subclass of: SO_0000010

position:78495:1
position: 78495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79706:1
position: 79706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78495-79706:1:exon

AV541_RS10580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10580
old locus tag: AV541_10585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008631406.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase
translation: MVYVIGMGARGREGLSLKALRRLEEAEVLIGGRRHLAHFPDHPGEKVPVQGPLEALLDLAEARLKEGKKVAFLASGDPLFYGIGKRVLERFPEAEVHPAPTAFQEAFARLKLPWDQARFFSLHGRPLGGVLLELSLSPLSVVYTDPEHTPAGIARALLEMGVDARAHVAERLGEEDERVRSFAGLKEVAEERFLDPNVLILEAKGPLPPRLGFFPDEAFEQRMPKKGLITKREVRLLALGLLGLPPDGVLWDIGAGTGSVGIEAARLAPWGEVYAVEKNPESWPHIVENARRFGAFNLHLVKGEAPEALKGLPAPHAVFVGGSGGELEEILRVSLKALRPGGRLVVAAITLENLLAAYGFLKGTGLPLEGFQVQASRVVPLARYHRLEAQNPITLLAVTKEGA
SIO_010081: AV541_RS10580
subclass of: SO_0000673
so part of: AV541_RS10580
location: 78495..79706
location: region:78495-79706:1
so has part: feature:78495-79706:1:exon

WP_008631406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78495-79706:1:exon

AV541_RS10585
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10585
old locus tag: AV541_10590
so part of: sequence
location: 79703..80374
location: region:79703-80374:1
so has part: feature:79703-80374:1:exon
subclass of: SO_0000010

position:79703:1
position: 79703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80374:1
position: 80374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79703-80374:1:exon

AV541_RS10585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10585
old locus tag: AV541_10590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014511288.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: precorrin-2 C(20)-methyltransferase
translation: MKLYLIGLGPGDPELLTLKALRLIQRLPVLFYPKEEGREPIALGIARPFLPEGKPLLPLPLFTGGDPKEAERARREAARRVREALSRYGEGGYLVLGDSLLYASPLNLLPHLEGVAVEAVPGISAHQLAAASLLKPIALGEEGFAAVTGLGPVDPEGLDRFQSVFVYKAKDLEALERAFPDREGWAFLRLGMPGERVLPLGAAKGVARDYWTLVGLWRKGGKR
SIO_010081: AV541_RS10585
subclass of: SO_0000673
so part of: AV541_RS10585
location: 79703..80374
location: region:79703-80374:1
so has part: feature:79703-80374:1:exon

WP_008631408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79703-80374:1:exon

AV541_RS13240
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS13240
so part of: sequence
location: 80371..80547
location: region:80371-80547:1
so has part: feature:80371-80547:1:exon
subclass of: SO_0000010

position:80371:1
position: 80371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80547:1
position: 80547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80371-80547:1:exon

AV541_RS13240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS13240
inference: COORDINATES: protein motif:HMM:NF012799.2
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SAM-dependent methyltransferase
translation: MRPVVHVVGGGPGDPELLTVKGARLLGEARFVLYTGSLFPKGPCGSLPQKRRFWTPRG
SIO_010081: AV541_RS13240
subclass of: SO_0000673
so part of: AV541_RS13240
location: 80371..80547
location: region:80371-80547:1
so has part: feature:80371-80547:1:exon

WP_276325520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80371-80547:1:exon

AV541_RS10590
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10590
old locus tag: AV541_10595
so part of: sequence
location: 80499..81113
location: region:80499-81113:1
so has part: feature:80499-81113:1:exon
subclass of: SO_0000010

position:80499:1
position: 80499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81113:1
position: 81113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80499-81113:1:exon

AV541_RS10590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10590
old locus tag: AV541_10595
inference: COORDINATES: protein motif:HMM:NF012799.2
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SAM-dependent methyltransferase
translation: MRELAPKAALLDSKGMTLEEIVLALAEEARKGGGVVRLHSGDPGLYGTLLEEKEALEALGVGVEVVPGVTAAFALAARAGLSLTAPGVAQAVAFTRLGVRTPVPEGQDPKSLARKGLTLAVYLSGMHPRRLSRELLEAGLPGDTPVLYGHKVAQPGEEVGLTDLKGLAHLPARDTTVYLVGEALRAKGVRSLLYDPSFKHRYRR
SIO_010081: AV541_RS10590
subclass of: SO_0000673
so part of: AV541_RS10590
location: 80499..81113
location: region:80499-81113:1
so has part: feature:80499-81113:1:exon

WP_276325521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80499-81113:1:exon

AV541_RS10595
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
gene: cobJ
locus tag: AV541_RS10595
old locus tag: AV541_10600
so part of: sequence
location: 81118..81981
location: region:81118-81981:1
so has part: feature:81118-81981:1:exon
subclass of: SO_0000010

position:81118:1
position: 81118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81981:1
position: 81981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81118-81981:1:exon

AV541_RS10595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
gene: cobJ
locus tag: AV541_RS10595
old locus tag: AV541_10600
EC number: 2.1.1.131
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630531.1
GO function: GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: precorrin-3B C(17)-methyltransferase
translation: MGELFLVGMGPGDLPGLTQRAREALEGAEVVIGYSTYVKLLEEMGLLAGKEVVRKGMTEELDRAEEALERALSGQRVALVSGGDPGIYGMAAPVLELMEERGLKRVDGGVGLPGRFAGEEGEVFLAVIPGVTAANAVASLLGSPLAHDTCLISLSDLLTPWPLIERRLHAAGQGDFVVVLYNPQSKRRDWQLRKSAEILLEYRPKETPAALVKSAYRKRQEVALTTLEGLREAEAGMLTTVVIGNRQSRFYEGTFLTPRGYALKYDLDTKEALPGETPGLSLRRRDA
SIO_010081: AV541_RS10595
subclass of: SO_0000673
so part of: AV541_RS10595
location: 81118..81981
location: region:81118-81981:1
so has part: feature:81118-81981:1:exon

WP_008631412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81118-81981:1:exon

AV541_RS10600
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10600
old locus tag: AV541_10605
so part of: sequence
location: 81974..83053
location: region:81974-83053:1
so has part: feature:81974-83053:1:exon
subclass of: SO_0000010

position:81974:1
position: 81974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83053:1
position: 83053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81974-83053:1:exon

AV541_RS10600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10600
old locus tag: AV541_10605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003045512.1
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cobalamin biosynthesis protein
translation: MPELGPLRPERVAVYTLTLPGLAVAERIHRVLPGSTLYAAAKYRGLLEEAVYFEEPIKELLLKTWPLHDGHVFVMASGIVLRAIAPLILGKRVDPAVLVVDLKGRYFVPLLAGHLGGANPLARHLAEALGGEAVLTTGTDSLNAPAPDLLAKALGARVPDWSPLKEVSALLVDGRPVGFWSDCVDLSPLGRYPMVRVLKEPRTEGVEGMVLFTVRKAFPLPVPALFAHPPALVLGIGCNRGTPLEEIRREVFAFLEEGGFARESLRVLATAELKWDEAGLLAFAEEVGLPLRFYPKEVLNAQRIPNPSEAVFRHTGLWGVAEAAVLAEGARLLVEKTKRGNLTLALGVLSLGIPEEALP
SIO_010081: AV541_RS10600
subclass of: SO_0000673
so part of: AV541_RS10600
location: 81974..83053
location: region:81974-83053:1
so has part: feature:81974-83053:1:exon

WP_060384871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81974-83053:1:exon

AV541_RS10605
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10605
old locus tag: AV541_10610
so part of: sequence
location: 83050..84153
location: region:83050-84153:1
so has part: feature:83050-84153:1:exon
subclass of: SO_0000010

position:83050:1
position: 83050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84153:1
position: 84153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83050-84153:1:exon

AV541_RS10605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10605
old locus tag: AV541_10610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003045510.1
GO function: GO:0016829 - lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CbiX/SirB N-terminal domain-containing protein
translation: MILLAAHGSPDPRAQALAQGLRKGLERRLGEEVLLGFIEHQSPTLLESALELARRGGGVVLPLLLLGAGHLKADLPLALEAARVRYPKARFLLARPLGTHPALVALWAERLRRRGATPQDGAVLVLRGGTDPGANAEGAALARLIEEKTGVPTVPAYAAKARPTPREALLRLATLRPRRVFLLPHLFFRGVVEERLRGRAGSLDLEVLPPLMGHPALLEALEGRYREALEGGYAPCDTCRYRFPLGRFAPRREAQIAGLRALRHALFAPGRHPHGPFTHLLLCTGEDCRERGALGLLRRLEEGLRDLGPLVQLTPTPCLSRCGKGPVLIAYPEGVVYGGLSPEDVLPLRKAHLEGGEVYREKLLEVI
SIO_010081: AV541_RS10605
subclass of: SO_0000673
so part of: AV541_RS10605
location: 83050..84153
location: region:83050-84153:1
so has part: feature:83050-84153:1:exon

WP_008631416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83050-84153:1:exon

AV541_RS10610
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10610
old locus tag: AV541_10615
so part of: sequence
location: 84154..84516
location: region:84154-84516:1
so has part: feature:84154-84516:1:exon
subclass of: SO_0000010

position:84154:1
position: 84154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84516:1
position: 84516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84154-84516:1:exon

AV541_RS10610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10610
old locus tag: AV541_10615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008631423.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3209 family protein
translation: MACHELSALRIAIGELLEKEAHDLLHEREELAPVLGERPELKRLAEAKTLPALEEALREALLHLEERAAQEPEEPYWRGLLLAVEAMEGRLKALRAEAEALYQDLDALHGRLHRLFPRRR
SIO_010081: AV541_RS10610
subclass of: SO_0000673
so part of: AV541_RS10610
location: 84154..84516
location: region:84154-84516:1
so has part: feature:84154-84516:1:exon

WP_008631423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84154-84516:1:exon

AV541_RS10615
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
gene: cobA
locus tag: AV541_RS10615
old locus tag: AV541_10620
so part of: sequence
location: 84513..85220
location: region:84513-85220:1
so has part: feature:84513-85220:1:exon
subclass of: SO_0000010

position:84513:1
position: 84513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85220:1
position: 85220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84513-85220:1:exon

AV541_RS10615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
gene: cobA
locus tag: AV541_RS10615
old locus tag: AV541_10620
EC number: 2.1.1.107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008631424.1
GO function: GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO process: GO:0019354 - siroheme biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uroporphyrinogen-III C-methyltransferase
translation: MRGKVYLVGAGFGGPEHLTLKALRVLEVAEVVLHDRLVHPGVLALAKGELVPVGKEGYGGKTPQEAITARLIALAREGRVVARLKGGDPMVFGRGGEEALALRRAGIPFEVVPGVTSAVGALSALGLPLTHRGLARSFAVATGHDPALPLPRADTLVLLMPLHTLGGLKERLLERFPPETPLALLTRVGWPGEAVRLGRVEDLPGLGEGLPSPALLVVGKVVGLYGELLPKDHGL
SIO_010081: AV541_RS10615
subclass of: SO_0000673
so part of: AV541_RS10615
location: 84513..85220
location: region:84513-85220:1
so has part: feature:84513-85220:1:exon

WP_060384872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84513-85220:1:exon

AV541_RS10620
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
gene: bluB
locus tag: AV541_RS10620
old locus tag: AV541_10625
so part of: sequence
location: 85186..85833
location: region:85186-85833:1
so has part: feature:85186-85833:1:exon
subclass of: SO_0000010

position:85186:1
position: 85186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85833:1
position: 85833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85186-85833:1:exon

AV541_RS10620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
gene: bluB
locus tag: AV541_RS10620
old locus tag: AV541_10625
EC number: 1.13.11.79
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014511285.1
GO function: GO:0016722 - oxidoreductase activity, acting on metal ions [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]; GO:0032363 - FMN catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5,6-dimethylbenzimidazole synthase
translation: MANSSRRTTAFSEAEKAAVYRALLTRRDIRHFRPDPIPEEVLERLYQAFHAAPSVGLTQPWAIVEIRERATKERVFALHQEARARERALFQGKAQRVYDRLRLEGLLEAPLHLAVFQRPVARSLGHHTMPETLAYSVVLAVGNLWTAARAEGIGVGWVSILEPEAVARLLGAPPDYRFLAYLCLGYPRAWPDEPLLERAGWRQREPLLRYRERFP
SIO_010081: AV541_RS10620
subclass of: SO_0000673
so part of: AV541_RS10620
location: 85186..85833
location: region:85186-85833:1
so has part: feature:85186-85833:1:exon

WP_060384873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85186-85833:1:exon

AV541_RS10625
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
gene: cbiB
locus tag: AV541_RS10625
old locus tag: AV541_10630
so part of: sequence
location: 85830..86678
location: region:85830-86678:1
so has part: feature:85830-86678:1:exon
subclass of: SO_0000010

position:85830:1
position: 85830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86678:1
position: 86678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85830-86678:1:exon

AV541_RS10625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
gene: cbiB
locus tag: AV541_RS10625
old locus tag: AV541_10630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008631428.1
GO function: GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenosylcobinamide-phosphate synthase CbiB
translation: MSLLLALLLDTLFGEPPSRFHPVVWMGRYLAWAWRRVRGFPSGAFYWALGALLFALPAFLLDLLLRPLAWGWVVLGLLLKPLFSLRMLLLEVFGVEKALEEGLEAGRRRLSRIVSRRTEDLSAEEVREAALESLAENLSDSLLAPLLYYALFGLGGAALYRYANTADAMWGYPEHGARGAFAARADDLLNLLPARLTGLLLCPPGLWGRLPQEARKTPSPNAGFPMAALALRLGVRLRKRGAYALNPLAPSPKASHTRKALWLVGGLGYGVGLLLAAATGLW
SIO_010081: AV541_RS10625
subclass of: SO_0000673
so part of: AV541_RS10625
location: 85830..86678
location: region:85830-86678:1
so has part: feature:85830-86678:1:exon

WP_060384874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85830-86678:1:exon

AV541_RS10630
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10630
old locus tag: AV541_10635
so part of: sequence
location: 86688..87107
location: region:86688-87107:1
so has part: feature:86688-87107:1:exon
subclass of: SO_0000010

position:86688:1
position: 86688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87107:1
position: 87107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86688-87107:1:exon

AV541_RS10630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10630
old locus tag: AV541_10635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014511283.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HEPN domain-containing protein
translation: MERSRDFLLQAKRDLEQARLSLREGFFEWAALAAQQAAEKAVKAVFQRLGAVAWGHSVAGLLEELAQKLPVPEALLDAASELDKAHIPSRYPDALPEGAPFQRYRRGEAERLLGHAEAVYAYCEGVLSQMDEGGAPPPP
SIO_010081: AV541_RS10630
subclass of: SO_0000673
so part of: AV541_RS10630
location: 86688..87107
location: region:86688-87107:1
so has part: feature:86688-87107:1:exon

WP_060384895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86688-87107:1:exon

AV541_RS13245
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS13245
old locus tag: AV541_10640
so part of: sequence
location: 87061..87375
location: region:87061-87375:1
so has part: feature:87061-87375:1:exon
subclass of: SO_0000010

position:87061:1
position: 87061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87375:1
position: 87375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87061-87375:1:exon

AV541_RS13245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS13245
old locus tag: AV541_10640
EC number: 2.7.7.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003048753.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase domain-containing protein
translation: MFYPRWTREELLLRLEEGLKALEKEVPLLEAWLFGSWARGRASVGSDVDLLLLYRGPRREDLHRLARKAFPGLPLELHAYTEEEAARLEAVLARMREGALRLRP
SIO_010081: AV541_RS13245
subclass of: SO_0000673
so part of: AV541_RS13245
location: 87061..87375
location: region:87061-87375:1
so has part: feature:87061-87375:1:exon

WP_008631433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87061-87375:1:exon

AV541_RS10640
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10640
old locus tag: AV541_10645
so part of: sequence
location: 87421..88419
location: region:87421-88419:1
so has part: feature:87421-88419:1:exon
subclass of: SO_0000010

position:87421:1
position: 87421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88419:1
position: 88419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87421-88419:1:exon

AV541_RS10640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10640
old locus tag: AV541_10645
EC number: 2.6.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008631435.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidinol-phosphate transaminase
translation: MLDDVLRPIHGGTDEGPEPLYDFSTNANALGPNPVALAYLRRADPSRYPDPLYRRLRRALAEAHGVSPEQVAVGTGTSELIHRLARWTYLRGPILLLPPTFGEYARAARALDLPLWEAESPEAFLELLPKSSLAFLCVPNNPTGEVYPFLEEAARRAGGALVLDLAYYDLMESPPPLPQTAFRLYSPNKAHGLTGVRAGYLLAPLDLTHFQNLAPSWPLSVYGEAFLHAHLDPEARAWLEGSKRELFRLRGLLAEGLRRLGLEVRESPANFLMARVGRATEVAKALRERGIRVRDCTSFGLPEWLRLSAQREEAIRALLLALEEVLAGKLRA
SIO_010081: AV541_RS10640
subclass of: SO_0000673
so part of: AV541_RS10640
location: 87421..88419
location: region:87421-88419:1
so has part: feature:87421-88419:1:exon

WP_039457443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87421-88419:1:exon

AV541_RS10645
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10645
old locus tag: AV541_10650
so part of: sequence
location: 88416..88685
location: region:88416-88685:1
so has part: feature:88416-88685:1:exon
subclass of: SO_0000010

position:88416:1
position: 88416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88685:1
position: 88685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88416-88685:1:exon

AV541_RS10645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10645
old locus tag: AV541_10650
EC number: 2.7.7.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015065315.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase domain-containing protein
translation: MTPELARYLEEALGRLRAALDLEAIYLFGSHARGTADRRSDLDLLVVARTPLPPLERIGLVLELLQDAPLPVEAIVLTPEECRERRDLP
SIO_010081: AV541_RS10645
subclass of: SO_0000673
so part of: AV541_RS10645
location: 88416..88685
location: region:88416-88685:1
so has part: feature:88416-88685:1:exon

WP_244880687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88416-88685:1:exon

AV541_RS10650
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10650
old locus tag: AV541_10655
pseudo: true
so part of: sequence
location: 88937..90948
location: region:88937-90948:1
so has part: feature:88937-90948:1:exon
subclass of: SO_0000010

position:88937:1
position: 88937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90948:1
position: 90948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88937-90948:1:exon

AV541_RS10650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10650
old locus tag: AV541_10655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630539.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cobyric acid synthase
SIO_010081: AV541_RS10650
subclass of: SO_0000673
so part of: AV541_RS10650
location: 88937..90948
location: region:88937-90948:1
so has part: feature:88937-90948:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88937-90948:1:exon

AV541_RS10655
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10655
old locus tag: AV541_10660
so part of: sequence
location: complement(90945..92450)
location: region:90945-92450:-1
so has part: feature:90945-92450:-1:exon
subclass of: SO_0000010

position:90945:-1
position: 90945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92450:-1
position: 92450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90945-92450:-1:exon

AV541_RS10655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10655
old locus tag: AV541_10660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011229222.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alkaline phosphatase
translation: MKRRDILKGGLAAGALALLPRGHTQGALQNQPSLGRRYRNLIVFVYDGFSWEDYAIAQAYARRRQGRVLALERLLARYPNGLINTYSLTSYVTESSAAGNAFSCGVKTVNGGLAIHADGTPLKPFFAAAKEAGKAVGLVTTTTVTHATPASFVVSNPDRNAEERIAEQYLGFGAEVYLGGGDRFFNPARRKDGKDLYTAFAAKGYGVVRTPEELARSNATRLLGVFADGHVPYEIDRRFQGLGVPSLKEMVQAALPRLAAHRGGFVLQVEAGRIDHANHLNDAGATLWDVLAADEVLELLTAFVDRNPDTLLIVVSDHATGVGGLYGAGRSYLESSRGVDLLEPQRASFEHMLRVLGQAPEASQVKEAFRAMKGVDLEDAEAERVVRAIREKVYWPEGVRQGVQPANTMAWAMVQRDAKKPDRPNIGYSSGQHTASPVMLLLYGQGLRFVNLGLVDNTHVFRLMGEALGLRYQNPVMSEEEALEILKARPQGMRHPEDVWA
SIO_010081: AV541_RS10655
subclass of: SO_0000673
so part of: AV541_RS10655
location: complement(90945..92450)
location: region:90945-92450:-1
so has part: feature:90945-92450:-1:exon

WP_060384875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90945-92450:-1:exon

AV541_RS10660
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
gene: nagA
locus tag: AV541_RS10660
old locus tag: AV541_10665
so part of: sequence
location: 92516..93583
location: region:92516-93583:1
so has part: feature:92516-93583:1:exon
subclass of: SO_0000010

position:92516:1
position: 92516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93583:1
position: 93583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92516-93583:1:exon

AV541_RS10660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
gene: nagA
locus tag: AV541_RS10660
old locus tag: AV541_10665
EC number: 3.5.1.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011174534.1
GO function: GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO process: GO:0006040 - amino sugar metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetylglucosamine-6-phosphate deacetylase
translation: MTLEGRILSPRGFVRGRLHFSERILAVEEAPVEGPYILPGFLDLHVHGGLGADAMEGKEAVLRMARFHLQHGTTGLLPTTVTAPPEAIEKALRGIAEAMGECEALLGVHLEGPFLSPKRLGAQPPFPQKPDPAWMEDLLARAPVRVVTLAPELPGALELVRLLVGRGVRVQLGHTAAGYEEALHALEAGAQGFTHLFNAMTPLHHRAPGVVGLALERGLWAELIPDGLHVHPAALRLALKSVPGLYFVTDAVAAAGMPDGVYPLGAQRVEKRGEGVWLGESLAGSTLTMDQALRKLVAFGLSLEEAARRLSTYPARYLGLKDRGEIAPGKRADLLVLGEDLRVEAVYLGGRRVAR
SIO_010081: AV541_RS10660
subclass of: SO_0000673
so part of: AV541_RS10660
location: 92516..93583
location: region:92516-93583:1
so has part: feature:92516-93583:1:exon

WP_052037951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92516-93583:1:exon

AV541_RS11315
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS11315
so part of: sequence
location: complement(93601..93723)
location: region:93601-93723:-1
so has part: feature:93601-93723:-1:exon
subclass of: SO_0000010

position:93601:-1
position: 93601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93723:-1
position: 93723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93601-93723:-1:exon

AV541_RS11315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS11315
inference: COORDINATES: protein motif:HMM:NF024950.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MPLRRYGKPEEAAEVAVFLLSPRNGYLTGQQVLVDGGLAV
SIO_010081: AV541_RS11315
subclass of: SO_0000673
so part of: AV541_RS11315
location: complement(93601..93723)
location: region:93601-93723:-1
so has part: feature:93601-93723:-1:exon

WP_231293536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93601-93723:-1:exon

AV541_RS10665
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10665
old locus tag: AV541_10670
so part of: sequence
location: complement(94039..96096)
location: region:94039-96096:-1
so has part: feature:94039-96096:-1:exon
subclass of: SO_0000010

position:94039:-1
position: 94039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96096:-1
position: 96096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94039-96096:-1:exon

AV541_RS10665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10665
old locus tag: AV541_10670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014511275.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: argonaute PAZ domain-containing protein
translation: MNHLGKTEVFLNRFALRPLNPEELRPWRLEVVLDPPPGREEVYPLLAQVARRAGGVTVRMGDGLASWSPPEVLVLEGTLARMGQTYAYRLYPKGRKPLDPKDPGERSALSSLARRLLQERLRRLEGVWVEGLAVYRREHARGPGWRVLGGAVLDLWVSDSGAFLLEVDPAYRILCEMSLEAWLAQGHPLPKRVRNAYDRRTWELLRLGEEDPKELPLPGGLSLLDYHASKGRLQGREGGRVAWVADPKDPRKPIPHLTGLLVPVLTLEDLHEEEGSLALSLPWEERRRRTREIASWIGRRLGLGTPEAVRAQAYRLSIPKLMGRRAVSKPADALRVGLYRAQETALALLRLDGAQGWPEFLRRALLQAFGASGASLRLHTLHAHPSQGLAFREALRKAKEKGVQAVLVLTPPMAWEDRNRLKALLLREGLPSQILNVPLREEERHRWENALLGLLAKAGLQVVALSGAYPAELAVGFDAGGRESFRFGGAACAVGGDGGHLLWTLPEAQAGERIPQEVVWDLLEETLWAFRRKAGRLPSRVLLLRDGRVPQDEFALALEALAREGIAYDLVSVRKSGGGRVYPVQGRLADGLYVPLEDRTFLLLTVHRDFRGTPRPLKLVHEAGDTPLEALAHQIFHLTRLYPASGFAFPRLPAPLHLADRLVKEVGRLGIRHLKEVDREKLFFV
SIO_010081: AV541_RS10665
subclass of: SO_0000673
so part of: AV541_RS10665
location: complement(94039..96096)
location: region:94039-96096:-1
so has part: feature:94039-96096:-1:exon

WP_060384876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94039-96096:-1:exon

AV541_RS10670
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10670
old locus tag: AV541_10675
so part of: sequence
location: 96274..96675
location: region:96274-96675:1
so has part: feature:96274-96675:1:exon
subclass of: SO_0000010

position:96274:1
position: 96274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96675:1
position: 96675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96274-96675:1:exon

AV541_RS10670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10670
old locus tag: AV541_10675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630543.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SaoD/DsrE family protein
translation: MRVAYVLSSPRAASHKLGQMILPQLEAGTHGVEVVGIFFFDDNTLVLQKGNPIGERLAKVAKEKGILLMMCDLCALERGLAEGEPRWCTPEGEGRKTPGTCRVSPHVVEGVEVGCFPDLYRALAGRVDQVITL
SIO_010081: AV541_RS10670
subclass of: SO_0000673
so part of: AV541_RS10670
location: 96274..96675
location: region:96274-96675:1
so has part: feature:96274-96675:1:exon

WP_008631445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96274-96675:1:exon

AV541_RS11635
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS11635
old locus tag: AV541_10680
pseudo: true
so part of: sequence
location: complement(96751..>97056)
location: region:96751-97056:-1
so has part: feature:96751-97056:-1:exon
subclass of: SO_0000010

position:96751:-1
position: 96751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97056:-1
position: 97056
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96751-97056:-1:exon

AV541_RS11635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS11635
old locus tag: AV541_10680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014511274.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 5'/3'-nucleotidase SurE
SIO_010081: AV541_RS11635
subclass of: SO_0000673
so part of: AV541_RS11635
location: complement(96751..>97056)
location: region:96751-97056:-1
so has part: feature:96751-97056:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96751-97056:-1:exon

AV541_RS11720
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS11720
old locus tag: AV541_10685
pseudo: true
so part of: sequence
location: complement(<97054..97736)
location: region:97054-97736:-1
so has part: feature:97054-97736:-1:exon
subclass of: SO_0000010

position:97054:-1
position: 97054
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:97736:-1
position: 97736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97054-97736:-1:exon

AV541_RS11720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS11720
old locus tag: AV541_10685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014511080.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AV541_RS11720
subclass of: SO_0000673
so part of: AV541_RS11720
location: complement(<97054..97736)
location: region:97054-97736:-1
so has part: feature:97054-97736:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:97054-97736:-1:exon

AV541_RS10685
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
gene: phr
locus tag: AV541_RS10685
old locus tag: AV541_10690
pseudo: true
so part of: sequence
location: complement(<97874..99019)
location: region:97874-99019:-1
so has part: feature:97874-99019:-1:exon
subclass of: SO_0000010

position:97874:-1
position: 97874
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:99019:-1
position: 99019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97874-99019:-1:exon

AV541_RS10685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
gene: phr
locus tag: AV541_RS10685
old locus tag: AV541_10690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011229192.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: deoxyribodipyrimidine photo-lyase
SIO_010081: AV541_RS10685
subclass of: SO_0000673
so part of: AV541_RS10685
location: complement(<97874..99019)
location: region:97874-99019:-1
so has part: feature:97874-99019:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:97874-99019:-1:exon

AV541_RS10690
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10690
old locus tag: AV541_10695
so part of: sequence
location: complement(99019..99870)
location: region:99019-99870:-1
so has part: feature:99019-99870:-1:exon
subclass of: SO_0000010

position:99870:-1
position: 99870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99019-99870:-1:exon

AV541_RS10690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10690
old locus tag: AV541_10695
EC number: 2.5.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630564.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phytoene/squalene synthase family protein
translation: MEPDWKALLRVLRAHSATFYLGSLLFPKEARKGAWAVYAACRLGDEAVDGEGGGPEALEAWWAGVERAYRGRPLAEWEKGLAWALERWDIPFEAFLHMREGFQTDLGPVRLGTEAELLRYCYQVAGTVGRMMAPIAGGGKEAEARAVKLGQAMQLTNILRDVGEDLERDRVYLPSELLKAYGVHLSDLEAGRITPEYRALMAHLEGKARALYREGLAGLGHLKVGRAAIALAALQYRGILDKLRLSGYDNLGRRAHLKAWERVLLVPKAFLAARFPPRLEESP
SIO_010081: AV541_RS10690
subclass of: SO_0000673
so part of: AV541_RS10690
location: complement(99019..99870)
location: region:99019-99870:-1
so has part: feature:99019-99870:-1:exon

WP_060384877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99019-99870:-1:exon

AV541_RS10695
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
gene: carH
locus tag: AV541_RS10695
old locus tag: AV541_10700
so part of: sequence
location: 99981..100838
location: region:99981-100838:1
so has part: feature:99981-100838:1:exon
subclass of: SO_0000010

position:99981:1
position: 99981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100838:1
position: 100838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99981-100838:1:exon

AV541_RS10695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
gene: carH
locus tag: AV541_RS10695
old locus tag: AV541_10700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011229194.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HTH-type transcriptional repressor CarH
translation: MTSSGVYTIAEVEAMTGLSAEVLRQWERRYGFPKPRRTPGGHRLYSAEDVEALKTIKRWLEEGATPKAAIRRYLAQGVRPEDLGTGLLEALLRGDLAGAEALFRRGLRFWGPEGVLEHLLLPVLREVGEAWHRGEIGVAEEHLASTFLRARLQELLDLAGLPPGPPVLVTTPPGERHEIGAMLAAYHLRRKGVPALYLGPDTPLPDLRALARRLGAGAVVLSALLSEPLRALPDGALKDLAPRVFLGGQGAGPEEARRLGAEYMEDLKGLAEALWLPRGPEKEAI
SIO_010081: AV541_RS10695
subclass of: SO_0000673
so part of: AV541_RS10695
location: 99981..100838
location: region:99981-100838:1
so has part: feature:99981-100838:1:exon

WP_060384878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99981-100838:1:exon

AV541_RS10700
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
gene: ldrP
locus tag: AV541_RS10700
old locus tag: AV541_10705
so part of: sequence
location: 100835..101422
location: region:100835-101422:1
so has part: feature:100835-101422:1:exon
subclass of: SO_0000010

position:100835:1
position: 100835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101422:1
position: 101422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100835-101422:1:exon

AV541_RS10700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
gene: ldrP
locus tag: AV541_RS10700
old locus tag: AV541_10705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011174504.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator LdrP
translation: MKRFARKETIYLRGEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEGKAYRYTAEAMTEAVVQGLDPRAMDHEALHRVARNLARQMRRVQAYEAHLQTGELRARIARYLLFLADTPLSARDRQGIYVTVSHEEIADATASIRESVSKVLADLRREGLIATAYRRIYLLDLAALEREAGGVLEAA
SIO_010081: AV541_RS10700
subclass of: SO_0000673
so part of: AV541_RS10700
location: 100835..101422
location: region:100835-101422:1
so has part: feature:100835-101422:1:exon

WP_008631462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100835-101422:1:exon

AV541_RS10705
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10705
old locus tag: AV541_10710
so part of: sequence
location: 101423..102286
location: region:101423-102286:1
so has part: feature:101423-102286:1:exon
subclass of: SO_0000010

position:101423:1
position: 101423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102286:1
position: 102286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101423-102286:1:exon

AV541_RS10705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10705
old locus tag: AV541_10710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011229196.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: complex I NDUFA9 subunit family protein
translation: MLVFVVGGTGFVGQEVVRLLLARGHTPLVLARRSRPLPEGAVLVEGDIAREVPDLKGAEAAIYLAGIIRERGQTFRAVHVDGVRNLLRAMERAGVGRLLHMSALGARPEAPSRYHRTKAEGEALVRQSGFSHAIFRPSLIFGPGDEFFGGVLRGLVCAPLPFVPLIGDGSFPFRPVYVGDVVEVFVGALERGLEGTYDLVGPREYTFRELLQLVMEVLGRRKPFLSLPLWLMDRLVPLLSPLPFAPLTKDQYLMLKEGNTAPFPEALRELLPAPQALEEVLPQYLRC
SIO_010081: AV541_RS10705
subclass of: SO_0000673
so part of: AV541_RS10705
location: 101423..102286
location: region:101423-102286:1
so has part: feature:101423-102286:1:exon

WP_060384879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101423-102286:1:exon

AV541_RS10710
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10710
old locus tag: AV541_10715
so part of: sequence
location: 102356..102682
location: region:102356-102682:1
so has part: feature:102356-102682:1:exon
subclass of: SO_0000010

position:102356:1
position: 102356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102682:1
position: 102682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102356-102682:1:exon

AV541_RS10710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10710
old locus tag: AV541_10715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003044894.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDFFVPRAKLTEYLLNPKHPEGGSKARFFMALGFSPGNPEALERALLRHAEEAEEVARRPGFLGEGLVWVLRGPLRGPRREVLLQSVRYLGKEGAAARLVTAYPWRGG
SIO_010081: AV541_RS10710
subclass of: SO_0000673
so part of: AV541_RS10710
location: 102356..102682
location: region:102356-102682:1
so has part: feature:102356-102682:1:exon

WP_008631466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102356-102682:1:exon

AV541_RS10715
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10715
old locus tag: AV541_10720
so part of: sequence
location: 102679..102897
location: region:102679-102897:1
so has part: feature:102679-102897:1:exon
subclass of: SO_0000010

position:102679:1
position: 102679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102897:1
position: 102897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102679-102897:1:exon

AV541_RS10715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10715
old locus tag: AV541_10720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630560.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4926 domain-containing protein
translation: MIREHDLVVLKRDKGEWGLEAVDVGTVVLIYPHGGYMVEFVDHEGNTLALLGLAEEEVAPLRGPALLRAKSP
SIO_010081: AV541_RS10715
subclass of: SO_0000673
so part of: AV541_RS10715
location: 102679..102897
location: region:102679-102897:1
so has part: feature:102679-102897:1:exon

WP_008631468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102679-102897:1:exon

AV541_RS10725
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10725
old locus tag: AV541_10730
so part of: sequence
location: 103185..104042
location: region:103185-104042:1
so has part: feature:103185-104042:1:exon
subclass of: SO_0000010

position:103185:1
position: 103185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104042:1
position: 104042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103185-104042:1:exon

AV541_RS10725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10725
old locus tag: AV541_10730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630559.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MGRAQGRAPKGVNGGGFYRFRVGGIQVVVLSDGQSPPGPLLPNWGANPELQEVFRRTLVEHFLDPETTRNNFNPVLLDLGEARLLVDTGRGAGSGGRLLAHLELAGYLPEDITHVFLTHGHPDHIGGLVDGEGRPVFAKAEHLMGRVDLEFWLQNPSPAVQRALVPLKERVRPVEDGEEILPGVRAVASFGHTPGHMSLEATSEGKGFFIFGDAAGHYLLSLRFPQAYLGFDMDKAQVVRTRARLFQKVSEKRSLITAYHFPWPAVGYIRREGEGYAFVPAFFEF
SIO_010081: AV541_RS10725
subclass of: SO_0000673
so part of: AV541_RS10725
location: 103185..104042
location: region:103185-104042:1
so has part: feature:103185-104042:1:exon

WP_060384881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103185-104042:1:exon

AV541_RS10730
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10730
old locus tag: AV541_10735
so part of: sequence
location: complement(104157..105452)
location: region:104157-105452:-1
so has part: feature:104157-105452:-1:exon
subclass of: SO_0000010

position:104157:-1
position: 104157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105452:-1
position: 105452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104157-105452:-1:exon

AV541_RS10730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10730
old locus tag: AV541_10735
EC number: 3.2.1.21
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011229206.1
GO function: GO:0008422 - beta-glucosidase activity [Evidence IEA]
GO process: GO:0030245 - cellulose catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GH1 family beta-glucosidase
translation: MAENAEKFLWGVATSAYQIEGATQEDGRGPSIWDTFAQRPGAIRDGSTGEPACDHYRRYEEDIALMQSLGVGAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPQALEDRGGWRSRETAFAFAEYAEAVARTLADRVPFFATLNEPWCSAFLGHWTGEHAPGLRNLEAALRAAHHLLLGHGLAVEALRAAGAKRVGIVLNFAPVYGEDPEAVDVADRYHNRYFLDPILGRGYPESPFQDPPPTPILSRDLEAIARPLDFLGVNYYAPVRVAPGTGPLPVRYLPPEGPVTAMGWEVYPEGLYHLLKRLGREVPWPLYITENGAAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWSLMDNFEWAFGYTRRFGLYYVDFPSQRRIPKRSALWYRERIARAQP
SIO_010081: AV541_RS10730
subclass of: SO_0000673
so part of: AV541_RS10730
location: complement(104157..105452)
location: region:104157-105452:-1
so has part: feature:104157-105452:-1:exon

WP_060384882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104157-105452:-1:exon

AV541_RS11725
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS11725
so part of: sequence
location: complement(105474..106154)
location: region:105474-106154:-1
so has part: feature:105474-106154:-1:exon
subclass of: SO_0000010

position:105474:-1
position: 105474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106154:-1
position: 106154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105474-106154:-1:exon

AV541_RS11725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS11725
inference: COORDINATES: protein motif:HMM:NF012738.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbohydrate ABC transporter permease
translation: MRTTLLYTLVVNALNLSLGLLVAHLLNRPLFLRGLWRSLILLPWVVPSYVVGLLWGFIWLKEGVINHLLVDVLGLLPQKPHWLIGPLTFVAIVLPTVWRSWPFVMVTYLAALQAIPQELYEAAMVDGATPFQAFHRVILPLALPGLAATAVYIFLTAWDELLFAQVLTTEATATIPVGIRNFVGNYQNRYDLVMAAATVATLPVLVVFFFAQRQLIQGLTAGAVKG
SIO_010081: AV541_RS11725
subclass of: SO_0000673
so part of: AV541_RS11725
location: complement(105474..106154)
location: region:105474-106154:-1
so has part: feature:105474-106154:-1:exon

WP_082709710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105474-106154:-1:exon

AV541_RS11325
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS11325
pseudo: true
so part of: sequence
location: complement(<106154..106255)
location: region:106154-106255:-1
so has part: feature:106154-106255:-1:exon
subclass of: SO_0000010

position:106255:-1
position: 106255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106154-106255:-1:exon

AV541_RS11325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS11325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014695689.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: LacI family DNA-binding transcriptional regulator
SIO_010081: AV541_RS11325
subclass of: SO_0000673
so part of: AV541_RS11325
location: complement(<106154..106255)
location: region:106154-106255:-1
so has part: feature:106154-106255:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106154-106255:-1:exon

AV541_RS10740
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10740
old locus tag: AV541_10745
so part of: sequence
location: 106288..106785
location: region:106288-106785:1
so has part: feature:106288-106785:1:exon
subclass of: SO_0000010

position:106288:1
position: 106288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106785:1
position: 106785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106288-106785:1:exon

AV541_RS10740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10740
old locus tag: AV541_10745
inference: COORDINATES: protein motif:HMM:NF013757.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IclR family transcriptional regulator
translation: MARPHLEALRDATLETVHLAVLDGKEVVYIDKVPGKRELLLASQIGSRFPAQSTALGKALLAFLPEERWPMAFTPGLKRTPNTLSDFARFREELLATRARGYALDLEKNEPGVRCVAAPILNGRGEPVAAVSVSTAAIYLDEERLSEVAAEVVRTAQRISRELGG
SIO_010081: AV541_RS10740
subclass of: SO_0000673
so part of: AV541_RS10740
location: 106288..106785
location: region:106288-106785:1
so has part: feature:106288-106785:1:exon

WP_235283805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106288-106785:1:exon

AV541_RS12860
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12860
pseudo: true
so part of: sequence
location: 107586..>107780
location: region:107586-107780:1
so has part: feature:107586-107780:1:exon
subclass of: SO_0000010

position:107586:1
position: 107586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107780:1
position: 107780
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107586-107780:1:exon

AV541_RS12860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12860
inference: COORDINATES: protein motif:HMM:NF012296.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cytochrome P450
SIO_010081: AV541_RS12860
subclass of: SO_0000673
so part of: AV541_RS12860
location: 107586..>107780
location: region:107586-107780:1
so has part: feature:107586-107780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:107586-107780:1:exon

AV541_RS12865
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12865
so part of: sequence
location: 107983..108261
location: region:107983-108261:1
so has part: feature:107983-108261:1:exon
subclass of: SO_0000010

position:107983:1
position: 107983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108261:1
position: 108261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107983-108261:1:exon

AV541_RS12865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12865
inference: COORDINATES: protein motif:HMM:NF012296.2
GO function: GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome P450
translation: MTQRLHFPDGEAFRPERFLEERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRVLAQVTLRPEGGLPARPRKGVRA
SIO_010081: AV541_RS12865
subclass of: SO_0000673
so part of: AV541_RS12865
location: 107983..108261
location: region:107983-108261:1
so has part: feature:107983-108261:1:exon

WP_244880688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107983-108261:1:exon

AV541_RS10750
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10750
old locus tag: AV541_10755
so part of: sequence
location: 108258..108956
location: region:108258-108956:1
so has part: feature:108258-108956:1:exon
subclass of: SO_0000010

position:108258:1
position: 108258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108956:1
position: 108956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108258-108956:1:exon

AV541_RS10750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10750
old locus tag: AV541_10755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630567.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lycopene cyclase domain-containing protein
translation: MTYLAFHLVFLLPPLLILLATGFPRPPRLWAYLLMPLIALVYTTPWDNYLVWQGVWGYPEGRVLLRLGYVPLEEYLFFLLQPLLTGAFLHRVAGAPPPGAGGLARVAGGGMWLLLAALGVLLLALGGRYLYLGLTLAYFAPVFVLQWAFGGDLLWGWRRALLLGAGLPTLYLWFADAWAIREGIWWISPRYTLGLGAFGLPLEEMAFFLFTNLAVVQGLLLAWHPEALRRLR
SIO_010081: AV541_RS10750
subclass of: SO_0000673
so part of: AV541_RS10750
location: 108258..108956
location: region:108258-108956:1
so has part: feature:108258-108956:1:exon

WP_060384883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108258-108956:1:exon

AV541_RS10755
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10755
old locus tag: AV541_10760
so part of: sequence
location: 108961..109407
location: region:108961-109407:1
so has part: feature:108961-109407:1:exon
subclass of: SO_0000010

position:108961:1
position: 108961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109407:1
position: 109407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108961-109407:1:exon

AV541_RS10755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10755
old locus tag: AV541_10760
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADLWKTLKERPTGKALRLLVEALVLRSLKESLRGVYLRGEAPEGPLVLALNHHGFFDGHLAWLLGKLCRRPLSLLVAEENLRAYPVLKLAGALEAGRVREALRRLRRGSGWPSSPRGRCATLGPWGPSGRGPTGSRGRRGFPSSPWP
SIO_010081: AV541_RS10755
subclass of: SO_0000673
so part of: AV541_RS10755
location: 108961..109407
location: region:108961-109407:1
so has part: feature:108961-109407:1:exon

WP_244880689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108961-109407:1:exon

AV541_RS13250
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS13250
so part of: sequence
location: 109398..109634
location: region:109398-109634:1
so has part: feature:109398-109634:1:exon
subclass of: SO_0000010

position:109398:1
position: 109398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109634:1
position: 109634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109398-109634:1:exon

AV541_RS13250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS13250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MALRVVLRGYEHPEAFVWIGKPVPPGEEAGALGGLLQALDALLAKTHPREVPEGFREVLRGRRSLEERVLPLVRLLRP
SIO_010081: AV541_RS13250
subclass of: SO_0000673
so part of: AV541_RS13250
location: 109398..109634
location: region:109398-109634:1
so has part: feature:109398-109634:1:exon

WP_276325522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109398-109634:1:exon

AV541_RS10760
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10760
old locus tag: AV541_10765
pseudo: true
so part of: sequence
location: 109631..110651
location: region:109631-110651:1
so has part: feature:109631-110651:1:exon
subclass of: SO_0000010

position:109631:1
position: 109631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110651:1
position: 110651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109631-110651:1:exon

AV541_RS10760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10760
old locus tag: AV541_10765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011174497.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycosyltransferase
SIO_010081: AV541_RS10760
subclass of: SO_0000673
so part of: AV541_RS10760
location: 109631..110651
location: region:109631-110651:1
so has part: feature:109631-110651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109631-110651:1:exon

AV541_RS10765
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10765
old locus tag: AV541_10770
so part of: sequence
location: 110705..110965
location: region:110705-110965:1
so has part: feature:110705-110965:1:exon
subclass of: SO_0000010

position:110705:1
position: 110705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110965:1
position: 110965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110705-110965:1:exon

AV541_RS10765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10765
old locus tag: AV541_10770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630570.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system Phd/YefM family antitoxin
translation: MKAIWQLQEAKARFSEVVERALKGEPQLVLRRGKKAVVVLDWETYARLTGEEASVLEALRPPKTLPNEEVEALFQRQKTGFREVDF
SIO_010081: AV541_RS10765
subclass of: SO_0000673
so part of: AV541_RS10765
location: 110705..110965
location: region:110705-110965:1
so has part: feature:110705-110965:1:exon

WP_011229190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110705-110965:1:exon

AV541_RS10770
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10770
old locus tag: AV541_10775
so part of: sequence
location: 110962..111378
location: region:110962-111378:1
so has part: feature:110962-111378:1:exon
subclass of: SO_0000010

position:110962:1
position: 110962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111378:1
position: 111378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110962-111378:1:exon

AV541_RS10770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10770
old locus tag: AV541_10775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003048855.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MRYLLDTNVVSEAVKRRPHPKVVAFLRHLKVGEAYLSALTLGELVQGVARAPEARRAILSRWLSGLKASFSGRILPLDAEVMELWGELTGNAMREGKPLSPLDAMLAATALRHGLILATRNTEDFRHVPVPLVNPWEG
SIO_010081: AV541_RS10770
subclass of: SO_0000673
so part of: AV541_RS10770
location: 110962..111378
location: region:110962-111378:1
so has part: feature:110962-111378:1:exon

WP_014511247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110962-111378:1:exon

AV541_RS10775
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
gene: crtI
locus tag: AV541_RS10775
old locus tag: AV541_10780
pseudo: true
so part of: sequence
location: 111476..113043
location: region:111476-113043:1
so has part: feature:111476-113043:1:exon
subclass of: SO_0000010

position:111476:1
position: 111476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113043:1
position: 113043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111476-113043:1:exon

AV541_RS10775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
gene: crtI
locus tag: AV541_RS10775
old locus tag: AV541_10780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008631494.1
GO function: GO:0016166 - phytoene dehydrogenase activity [Evidence IEA]
GO process: GO:0016117 - carotenoid biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phytoene desaturase family protein
SIO_010081: AV541_RS10775
subclass of: SO_0000673
so part of: AV541_RS10775
location: 111476..113043
location: region:111476-113043:1
so has part: feature:111476-113043:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111476-113043:1:exon

AV541_RS13255
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
gene: fni
locus tag: AV541_RS13255
old locus tag: AV541_10785
pseudo: true
so part of: sequence
location: 113040..114035
location: region:113040-114035:1
so has part: feature:113040-114035:1:exon
subclass of: SO_0000010

position:113040:1
position: 113040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114035:1
position: 114035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113040-114035:1:exon

AV541_RS13255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
gene: fni
locus tag: AV541_RS13255
old locus tag: AV541_10785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011229187.1
GO function: GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
GO process: GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type 2 isopentenyl-diphosphate Delta-isomerase
SIO_010081: AV541_RS13255
subclass of: SO_0000673
so part of: AV541_RS13255
location: 113040..114035
location: region:113040-114035:1
so has part: feature:113040-114035:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113040-114035:1:exon

AV541_RS10785
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10785
old locus tag: AV541_10790
so part of: sequence
location: 114045..114515
location: region:114045-114515:1
so has part: feature:114045-114515:1:exon
subclass of: SO_0000010

position:114045:1
position: 114045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114515:1
position: 114515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114045-114515:1:exon

AV541_RS10785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10785
old locus tag: AV541_10790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008631496.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase domain-containing protein
translation: MRGVRAPEESLREVLARFPQVQAAFLFGSRAEGRARADSDWDLALLLSPEEPDPTLEVLGALVEAGLERVDLVLLHRAPPLLAFLAVMGKPVFLREGFDLGSYVSRVAREWWDTEPLLRVQREAIKRRWLDPRTLPTSPFRGKSPLAGAARIWYRG
SIO_010081: AV541_RS10785
subclass of: SO_0000673
so part of: AV541_RS10785
location: 114045..114515
location: region:114045-114515:1
so has part: feature:114045-114515:1:exon

WP_060384884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114045-114515:1:exon

AV541_RS10790
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10790
old locus tag: AV541_10795
so part of: sequence
location: 114622..115746
location: region:114622-115746:1
so has part: feature:114622-115746:1:exon
subclass of: SO_0000010

position:114622:1
position: 114622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115746:1
position: 115746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114622-115746:1:exon

AV541_RS10790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10790
old locus tag: AV541_10795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008630830.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MRGALAAGSARVSEMVASLPSPLQNRFHQAKALYRFLSNPRVEAEALLDRVYQESATALEGEEVLVLLDLSPVVKPYARALEGIARVGKDRRPGYELLTALGLDPAGRLALGYAHLVAYGERGFASLPKEVEGAIEAARERLGGVGRRLVYVADRGFDDRKVFGQVLALGEEFVVRVYRDRKLGEGGSLAKVAPSLALPCGEEVELRVGGRYQRVRLHFGWREVEVEGRRLHLVVCRVPALGRRGEWWLLTSLPVRGREEAARVVEAYRRRWEVERFFRLLKTGLGLETFQVRGLARIRKVVAVLLGLAVFLWEVERLGDPFKGFLLQLGGKLGLPSERDGPYLLLRGLVRLLNYEVTQELLKQAKGGRGRSFG
SIO_010081: AV541_RS10790
subclass of: SO_0000673
so part of: AV541_RS10790
location: 114622..115746
location: region:114622-115746:1
so has part: feature:114622-115746:1:exon

WP_008631498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114622-115746:1:exon

AV541_RS10795
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10795
old locus tag: AV541_10800
pseudo: true
so part of: sequence
location: complement(<115755..117272)
location: region:115755-117272:-1
so has part: feature:115755-117272:-1:exon
subclass of: SO_0000010

position:115755:-1
position: 115755
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:117272:-1
position: 117272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115755-117272:-1:exon

AV541_RS10795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10795
old locus tag: AV541_10800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011174358.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1634 family transposase
SIO_010081: AV541_RS10795
subclass of: SO_0000673
so part of: AV541_RS10795
location: complement(<115755..117272)
location: region:115755-117272:-1
so has part: feature:115755-117272:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115755-117272:-1:exon

AV541_RS10800
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10800
old locus tag: AV541_10805
so part of: sequence
location: complement(117545..118438)
location: region:117545-118438:-1
so has part: feature:117545-118438:-1:exon
subclass of: SO_0000010

position:117545:-1
position: 117545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118438:-1
position: 118438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117545-118438:-1:exon

AV541_RS10800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10800
old locus tag: AV541_10805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011174478.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MSRLDEVLGTAILKGKKALGKEAPEVLRLPLDLLRVRGQPRRRFENLEALAESIREKGVLQPLLVRRVGEAYEVVAGERRLRAAAMAGLKEVPARVLELSDKEARLLALVENLQREDLNPYEETLGVLALLSEDLGRSVEEVVGLLRKMKNAKEGRVRDNVVPTAEARRVEELFKALGRMSWESFVQHRLPLLSLPEDLRAALEEGAIPYTAALELKKVKDASLRKALLEEARAGLSLRELKARVRGVLRKEKAPRPWPKEVAAKLVRLDLEALPPERRARVEELLAELERVLEGPR
SIO_010081: AV541_RS10800
subclass of: SO_0000673
so part of: AV541_RS10800
location: complement(117545..118438)
location: region:117545-118438:-1
so has part: feature:117545-118438:-1:exon

WP_038029513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117545-118438:-1:exon

AV541_RS10805
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10805
old locus tag: AV541_10810
so part of: sequence
location: complement(118435..119400)
location: region:118435-119400:-1
so has part: feature:118435-119400:-1:exon
subclass of: SO_0000010

position:118435:-1
position: 118435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119400:-1
position: 119400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118435-119400:-1:exon

AV541_RS10805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10805
old locus tag: AV541_10810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008631501.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MKQGELVPVSEMARRLGVTRERVRQMILEGKLEGVRLGRYWYVREREGGRLRRVYTFFTHAGGAGKTSLARDLGFELARRGFRVLLVDTDPQANLTSWLGVREVAPEETLLHLVDTGQLPTPRRLSEWGLDLIPASLDLARVEVRLMQRPLSTLLLRTTLRKTEGYDFVLIDSLPSLGHLAALGALAGDGLLVPVETSVKGVEALVGVMEAAQEYREALEQVDPRVPRSFVRLFVPTKFDARTLGDNRVLEKIAGLEDLAPVASPIAYRPGPHRRATERAVPLQLVGDRQAREEVERLAEEFLQRVVAQDAAREGVLEVAE
SIO_010081: AV541_RS10805
subclass of: SO_0000673
so part of: AV541_RS10805
location: complement(118435..119400)
location: region:118435-119400:-1
so has part: feature:118435-119400:-1:exon

WP_060384885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118435-119400:-1:exon

AV541_RS10810
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10810
old locus tag: AV541_10815
so part of: sequence
location: complement(119918..121309)
location: region:119918-121309:-1
so has part: feature:119918-121309:-1:exon
subclass of: SO_0000010

position:119918:-1
position: 119918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121309:-1
position: 121309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119918-121309:-1:exon

AV541_RS10810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10810
old locus tag: AV541_10815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011174476.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MARKRKQDATPPLFELELAKEPRHFDEANVARLGLISIQERIPEGYASWEEEFEVLGKPVKLACYANPNVGGVPHGLDNEVSLALIALYLNAGSPPDGTFTTTAYQILKLMGFDTSGYYYRALKESLLRLTTATYVLSEAWRADGRWQSVSFRYIDKLEFTSGKEGSLDRSSVIRITLAKEIVRSLQNRYTKPIDIEFMASLKRPLSRALYRLLDAQRLSPEREEPLARLEVGLMEWAAACKIVHKRPDKVRRTLEPAHRELIERRYLRSVEYVGRGKNQTIVYVFGEEAGGIPDAEAVNLLMAEGLSFTSAYSLARRYSLGHIKERLERYQAILEAGYRPKNRLGLLVDVIRDETGKYERPTRTRRPAKRQAAQEEAEARRLEEEAAREWAEMPREAQIRRALQVAQLVLRSRISVGELEDLSRLMESGALEPRQVVEELKEALAQDRLEGWLERFRKMLPG
SIO_010081: AV541_RS10810
subclass of: SO_0000673
so part of: AV541_RS10810
location: complement(119918..121309)
location: region:119918-121309:-1
so has part: feature:119918-121309:-1:exon

WP_060384886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119918-121309:-1:exon

AV541_RS10815
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10815
old locus tag: AV541_10820
pseudo: true
so part of: sequence
location: complement(121379..>121729)
location: region:121379-121729:-1
so has part: feature:121379-121729:-1:exon
subclass of: SO_0000010

position:121379:-1
position: 121379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121729:-1
position: 121729
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121379-121729:-1:exon

AV541_RS10815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10815
old locus tag: AV541_10820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014511223.1
GO function: GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: molybdopterin dinucleotide binding domain-containing protein
SIO_010081: AV541_RS10815
subclass of: SO_0000673
so part of: AV541_RS10815
location: complement(121379..>121729)
location: region:121379-121729:-1
so has part: feature:121379-121729:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121379-121729:-1:exon

AV541_RS10825
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10825
old locus tag: AV541_10830
so part of: sequence
location: complement(121933..123030)
location: region:121933-123030:-1
so has part: feature:121933-123030:-1:exon
subclass of: SO_0000010

position:121933:-1
position: 121933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123030:-1
position: 123030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121933-123030:-1:exon

AV541_RS10825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10825
old locus tag: AV541_10830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014511219.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YwiC-like family protein
translation: MRAASVPLKSVALPTEHGGWGFTLEPLLLGLLLSPGLPTLGLFLLGLFGFLARHPLKLLYQDLRRGKRYPRTDLALKVAGVYLVLALLGFLLAASTARGPFLLPLLLALPLGAYMAWADAQNRARELFPEIGAALFMAAFAPAGVLAGGLPQEVALGSFLVLALRDVAALYYARTQVLRARGLKPKRHPALLALWGNALLAFLLAQGRLLPYPVFLALLLLALYGSLTLFRPPVPARVVGWTQMGFGLLVVLSAALGYTLQGLPTALLGVPALHRLLGFALVALAFLAGAYLLVKRQVPRFARALLGLYDLNALLGLLYLAFAGKVLPHPLLALFGVALLHALIKRPHPWPGIGFLLLGLLLLWH
SIO_010081: AV541_RS10825
subclass of: SO_0000673
so part of: AV541_RS10825
location: complement(121933..123030)
location: region:121933-123030:-1
so has part: feature:121933-123030:-1:exon

WP_060384888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121933-123030:-1:exon

AV541_RS10830
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10830
old locus tag: AV541_10835
so part of: sequence
location: complement(123074..123451)
location: region:123074-123451:-1
so has part: feature:123074-123451:-1:exon
subclass of: SO_0000010

position:123074:-1
position: 123074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123451:-1
position: 123451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123074-123451:-1:exon

AV541_RS10830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10830
old locus tag: AV541_10835
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008631509.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIPASRLALTTALLWFLTGSLVGLLLGLGLLPYTWRPAHAHMQLLGFVSLMIYGVAYHALPRFRGVVFRRAGVALLQVALANLGLLGMALAWGLNLGPSVWGFFAGVSFLAGALFALLMLEVLWA
SIO_010081: AV541_RS10830
subclass of: SO_0000673
so part of: AV541_RS10830
location: complement(123074..123451)
location: region:123074-123451:-1
so has part: feature:123074-123451:-1:exon

WP_060384889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123074-123451:-1:exon

AV541_RS10835
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10835
old locus tag: AV541_10840
so part of: sequence
location: complement(123448..123744)
location: region:123448-123744:-1
so has part: feature:123448-123744:-1:exon
subclass of: SO_0000010

position:123448:-1
position: 123448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123744:-1
position: 123744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123448-123744:-1:exon

AV541_RS10835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10835
old locus tag: AV541_10840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015717647.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin
translation: MNLLKKARYGEVRGVELLADHPEVRLVLFSLQAGQEVRGKGEPRVHLLCLEGEGTLWAGERSIPATPGTLLAVEPGEAHGAKAGEGTFLVLGIITPRP
SIO_010081: AV541_RS10835
subclass of: SO_0000673
so part of: AV541_RS10835
location: complement(123448..123744)
location: region:123448-123744:-1
so has part: feature:123448-123744:-1:exon

WP_008631511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123448-123744:-1:exon

AV541_RS10840
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10840
old locus tag: AV541_10845
so part of: sequence
location: complement(123741..123938)
location: region:123741-123938:-1
so has part: feature:123741-123938:-1:exon
subclass of: SO_0000010

position:123741:-1
position: 123741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123938:-1
position: 123938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123741-123938:-1:exon

AV541_RS10840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10840
old locus tag: AV541_10845
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015717646.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF542 domain-containing protein
translation: MVELTLKTTVNEVLQRHPEAVRLLNEMGIDTCCGGADSLEEASRQAGKNPEEVLKALLALLGRQG
SIO_010081: AV541_RS10840
subclass of: SO_0000673
so part of: AV541_RS10840
location: complement(123741..123938)
location: region:123741-123938:-1
so has part: feature:123741-123938:-1:exon

WP_008631512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123741-123938:-1:exon

AV541_RS10845
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10845
old locus tag: AV541_10850
so part of: sequence
location: complement(123987..124412)
location: region:123987-124412:-1
so has part: feature:123987-124412:-1:exon
subclass of: SO_0000010

position:123987:-1
position: 123987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124412:-1
position: 124412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123987-124412:-1:exon

AV541_RS10845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10845
old locus tag: AV541_10850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015717645.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rrf2 family transcriptional regulator
translation: MPVRSLLRREESYALHALLLLAEEPGLSAAEIAAKLKAPPAFMAKVLSKLAKAGLVESRVGRTGGVWLRVPPEEITLLEVMESLSGPVAVDLCATLKRCPTEEKRGFCYLKPNLVRMNQEIRKTLASLTLKDILPETTKTA
SIO_010081: AV541_RS10845
subclass of: SO_0000673
so part of: AV541_RS10845
location: complement(123987..124412)
location: region:123987-124412:-1
so has part: feature:123987-124412:-1:exon

WP_008631514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123987-124412:-1:exon

AV541_RS10850
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10850
old locus tag: AV541_10855
pseudo: true
so part of: sequence
location: 124506..>125743
location: region:124506-125743:1
so has part: feature:124506-125743:1:exon
subclass of: SO_0000010

position:124506:1
position: 124506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125743:1
position: 125743
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124506-125743:1:exon

AV541_RS10850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10850
old locus tag: AV541_10855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011228558.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256 family transposase
SIO_010081: AV541_RS10850
subclass of: SO_0000673
so part of: AV541_RS10850
location: 124506..>125743
location: region:124506-125743:1
so has part: feature:124506-125743:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124506-125743:1:exon

AV541_RS10855
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10855
old locus tag: AV541_10860
so part of: sequence
location: complement(125750..126874)
location: region:125750-126874:-1
so has part: feature:125750-126874:-1:exon
subclass of: SO_0000010

position:125750:-1
position: 125750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126874:-1
position: 126874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125750-126874:-1:exon

AV541_RS10855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10855
old locus tag: AV541_10860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008630830.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MRGALAAGSARVSEMVASLPSPLQNRFHQAKALYRFLSNPRVEAEALLDRVYQESATALEGEEVLVLLDLSPVAKPYARALEGIARVGKDRRPGYELLTALGLDPAGRLALGYAHLVAYGERGFASLPKEVEGAIEAARERLGGVGRRLVYVADRGFDDRKVFGQVLALGEEFVVRVYRDRKLGEGGSLAKVASSLALPCGEEVELRVGGRYQRVRLHFGWREVEVEGRRLHLVVCRVPALGRRGEWWLLTSLPVRGREEAARVVEAYRRRWEVERFFRLLKTGLGLETFQVRGLARIRKVVAVLLGLAVFLWEVERLGDPFKGFLLQLGGKLGLPSERDGPYLLLRGLVRLLNYEVTQELLKQAKGGRGRSFG
SIO_010081: AV541_RS10855
subclass of: SO_0000673
so part of: AV541_RS10855
location: complement(125750..126874)
location: region:125750-126874:-1
so has part: feature:125750-126874:-1:exon

WP_082367395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125750-126874:-1:exon

AV541_RS13260
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS13260
old locus tag: AV541_10865
so part of: sequence
location: 127109..127663
location: region:127109-127663:1
so has part: feature:127109-127663:1:exon
subclass of: SO_0000010

position:127109:1
position: 127109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127663:1
position: 127663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127109-127663:1:exon

AV541_RS13260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS13260
old locus tag: AV541_10865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015065483.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase family protein
translation: MTLREALSQIPDPRARNRQYPLWGLLALILVAFLSRVDSLRGVERFARANPHLLPHLGLRKAPGHTAITLLLHRLDPEKLQAALLQVFPEADLGEVLVVDGKHLRGSGKGKSAQVKLVEVLALHLHTTLAQARAEGREDQALLELLDRLGAEGLKGKVVVGDAGYLYPELAGKVVQKGGRTSLS
SIO_010081: AV541_RS13260
subclass of: SO_0000673
so part of: AV541_RS13260
location: 127109..127663
location: region:127109-127663:1
so has part: feature:127109-127663:1:exon

WP_014629763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127109-127663:1:exon

AV541_RS12895
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12895
old locus tag: AV541_10870
so part of: sequence
location: 127684..128199
location: region:127684-128199:1
so has part: feature:127684-128199:1:exon
subclass of: SO_0000010

position:127684:1
position: 127684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128199:1
position: 128199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127684-128199:1:exon

AV541_RS12895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12895
old locus tag: AV541_10870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015716433.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEWALEVFKGMEERRLPGETEAVWNLVRDGEVWTYRVWASPYLPEEVRAFPGCRQVVRMEREVRHKGTGEVRRTVSYALTSLGPEVAEARRLGELLLYRWEVENRSFWVRDVLLHEDACQVRGVGAQVLAALRAFLVSMLHRQGVREKKAALEAFSFNPLSALRFLRLYAV
SIO_010081: AV541_RS12895
subclass of: SO_0000673
so part of: AV541_RS12895
location: 127684..128199
location: region:127684-128199:1
so has part: feature:127684-128199:1:exon

WP_041436296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127684-128199:1:exon

AV541_RS10870
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10870
old locus tag: AV541_10875
so part of: sequence
location: 128246..128908
location: region:128246-128908:1
so has part: feature:128246-128908:1:exon
subclass of: SO_0000010

position:128246:1
position: 128246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128908:1
position: 128908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128246-128908:1:exon

AV541_RS10870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10870
old locus tag: AV541_10875
inference: COORDINATES: protein motif:HMM:NF014312.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome D1 domain-containing protein
translation: MIDTELFLHDGGWALKRYFIVAANTMNKLIAIDTKTREFAAEVEAGVRPHPGRGSNWVHPTYGPVWATGNIGSPEVTVVGVDPEKHPQYAWKVVKRIQLPYAGTLFIKSHPNSPWVIVDFPMSPSPEAAASLCAIDKRKLEVTKCWEVPGARELKARMVHPEFNKGGTEIWVSAWGSKDTPTFIVVYDALTLKEKARITGDWVRTPTGKFNVYNTAHDIY
SIO_010081: AV541_RS10870
subclass of: SO_0000673
so part of: AV541_RS10870
location: 128246..128908
location: region:128246-128908:1
so has part: feature:128246-128908:1:exon

WP_244880692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128246-128908:1:exon

AV541_RS10875
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10875
old locus tag: AV541_10880
pseudo: true
so part of: sequence
location: 128990..130116
location: region:128990-130116:1
so has part: feature:128990-130116:1:exon
subclass of: SO_0000010

position:128990:1
position: 128990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130116:1
position: 130116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128990-130116:1:exon

AV541_RS10875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10875
old locus tag: AV541_10880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630592.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: TIGR04053 family radical SAM/SPASM domain-containing protein
SIO_010081: AV541_RS10875
subclass of: SO_0000673
so part of: AV541_RS10875
location: 128990..130116
location: region:128990-130116:1
so has part: feature:128990-130116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128990-130116:1:exon

AV541_RS10880
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10880
old locus tag: AV541_10885
so part of: sequence
location: 130122..130553
location: region:130122-130553:1
so has part: feature:130122-130553:1:exon
subclass of: SO_0000010

position:130122:1
position: 130122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130553:1
position: 130553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130122-130553:1:exon

AV541_RS10880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10880
old locus tag: AV541_10885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014511209.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c
translation: MLRKKLLVGALAALGLLGLALAQEGAKLYGQYCQACHQPTGLGVPGVFPSLKGLDQLAKEEKGRVYLIRVVLFGLQGPLKVGSATYNGVMPGFSQLSDAEVAALLNYVLSSFGNKNPKPITPEEVKKVRAKPVKPQDVAKGRP
SIO_010081: AV541_RS10880
subclass of: SO_0000673
so part of: AV541_RS10880
location: 130122..130553
location: region:130122-130553:1
so has part: feature:130122-130553:1:exon

WP_060384890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130122-130553:1:exon

AV541_RS10885
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10885
old locus tag: AV541_10890
so part of: sequence
location: complement(130550..130954)
location: region:130550-130954:-1
so has part: feature:130550-130954:-1:exon
subclass of: SO_0000010

position:130550:-1
position: 130550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130954:-1
position: 130954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130550-130954:-1:exon

AV541_RS10885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10885
old locus tag: AV541_10890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008633693.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix DNA-binding protein
translation: MVDLAALFALTPATVSEALAALERKGLLQREKDEKDKRRWRLKPTEEGQALARALKGYAAPMSQALREVEDPEGFLLGLMALLAALARQEVVAETGLCLTCRHLRREEGFFCALLQIPLAPLNLRLACPDHAPA
SIO_010081: AV541_RS10885
subclass of: SO_0000673
so part of: AV541_RS10885
location: complement(130550..130954)
location: region:130550-130954:-1
so has part: feature:130550-130954:-1:exon

WP_244880693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130550-130954:-1:exon

AV541_RS10890
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10890
old locus tag: AV541_10895
pseudo: true
so part of: sequence
location: <131089..131416
location: region:131089-131416:1
so has part: feature:131089-131416:1:exon
subclass of: SO_0000010

position:131089:1
position: 131089
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:131416:1
position: 131416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131089-131416:1:exon

AV541_RS10890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10890
old locus tag: AV541_10895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011229167.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: peptide-methionine (S)-S-oxide reductase
SIO_010081: AV541_RS10890
subclass of: SO_0000673
so part of: AV541_RS10890
location: <131089..131416
location: region:131089-131416:1
so has part: feature:131089-131416:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131089-131416:1:exon

AV541_RS10895
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10895
old locus tag: AV541_10900
pseudo: true
so part of: sequence
location: complement(131394..131761)
location: region:131394-131761:-1
so has part: feature:131394-131761:-1:exon
subclass of: SO_0000010

position:131394:-1
position: 131394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131761:-1
position: 131761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131394-131761:-1:exon

AV541_RS10895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10895
old locus tag: AV541_10900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630599.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF488 family protein
SIO_010081: AV541_RS10895
subclass of: SO_0000673
so part of: AV541_RS10895
location: complement(131394..131761)
location: region:131394-131761:-1
so has part: feature:131394-131761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131394-131761:-1:exon

AV541_RS10900
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10900
old locus tag: AV541_10905
so part of: sequence
location: complement(131772..132167)
location: region:131772-132167:-1
so has part: feature:131772-132167:-1:exon
subclass of: SO_0000010

position:131772:-1
position: 131772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132167:-1
position: 132167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131772-132167:-1:exon

AV541_RS10900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10900
old locus tag: AV541_10905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011229165.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVRLRKPLPPYALKTPEGGKVYLPDLKGMPLVLLRSEALAQGLAAREAELKALEAQAYLLAQAPRPSPLPLLLDPEGALLSAIPEGSVLVTDAFLEVYHLGPVRDEEEVLEWLRFVEAQCPECVLPEADWL
SIO_010081: AV541_RS10900
subclass of: SO_0000673
so part of: AV541_RS10900
location: complement(131772..132167)
location: region:131772-132167:-1
so has part: feature:131772-132167:-1:exon

WP_060384892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131772-132167:-1:exon

AV541_RS10905
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10905
old locus tag: AV541_10910
so part of: sequence
location: 132255..132497
location: region:132255-132497:1
so has part: feature:132255-132497:1:exon
subclass of: SO_0000010

position:132255:1
position: 132255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132497:1
position: 132497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132255-132497:1:exon

AV541_RS10905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10905
old locus tag: AV541_10910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019551189.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTTLDLPDPLYRRLKLQAAREGKTLRELVIRYLEEGLRRGGSPGPRPLPQVPEAGRRIPVRTHEELWALLEDEGGPAGP
SIO_010081: AV541_RS10905
subclass of: SO_0000673
so part of: AV541_RS10905
location: 132255..132497
location: region:132255-132497:1
so has part: feature:132255-132497:1:exon

WP_014630601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132255-132497:1:exon

AV541_RS10910
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10910
old locus tag: AV541_10915
so part of: sequence
location: 132478..132669
location: region:132478-132669:1
so has part: feature:132478-132669:1:exon
subclass of: SO_0000010

position:132478:1
position: 132478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132669:1
position: 132669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132478-132669:1:exon

AV541_RS10910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10910
old locus tag: AV541_10915
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDLLDLNVWFALLVPEHPFHARARAYWERASDPFLVRVTALGLLRLLTNAKAMGGSWRRPSDP
SIO_010081: AV541_RS10910
subclass of: SO_0000673
so part of: AV541_RS10910
location: 132478..132669
location: region:132478-132669:1
so has part: feature:132478-132669:1:exon

WP_008633688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132478-132669:1:exon

AV541_RS10915
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10915
old locus tag: AV541_10920
so part of: sequence
location: 132703..133890
location: region:132703-133890:1
so has part: feature:132703-133890:1:exon
subclass of: SO_0000010

position:132703:1
position: 132703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133890:1
position: 133890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132703-133890:1:exon

AV541_RS10915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10915
old locus tag: AV541_10920
EC number: 1.6.5.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019550627.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MGGAWPEVVILGGGFAGLAAARVLERARVPYLLVDARNHHLFQPLLYQVATGFLEGPAIAYPLRALVRRGRVLLARARAVDLEGRRLLLEDGDVLPYRHLVVATGSLPSDLGVPGVGERALLLKTLGQALRVRHRLLMALERAAREGAPLSLVVVGGGPTGVELSGALAEFLRYALPRDFPEIPEARVVLLEAGPRLLPAFRPALSRYAERALAHLGVEVRLGAQVAAVEERGVRLASGEGLVGDLILWAVGVRGNPLPGLPADARGRVPTDPYLRLPGHPEVYVVGDLNGLGFPQLAPVALQQGAWAAGNLLRALRGQDPLPFRYRDRGQLAVIGRNRAVAELWGRGLAGFPAWLLWAFVHLRELVGFRNRLLVFLDWAYTYLFREPGVRVLPD
SIO_010081: AV541_RS10915
subclass of: SO_0000673
so part of: AV541_RS10915
location: 132703..133890
location: region:132703-133890:1
so has part: feature:132703-133890:1:exon

WP_008633686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132703-133890:1:exon

AV541_RS10920
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10920
old locus tag: AV541_10925
so part of: sequence
location: complement(133887..134453)
location: region:133887-134453:-1
so has part: feature:133887-134453:-1:exon
subclass of: SO_0000010

position:133887:-1
position: 133887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134453:-1
position: 134453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133887-134453:-1:exon

AV541_RS10920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10920
old locus tag: AV541_10925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630607.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVEPFEGKALVRPGGRVEPLDLAPGERRTLAVERSEDALLVGLQGTLVLRFWGRSLRLGPGKTARLRPGRLDLEAPEGGRALWVVLGLAQSRLAQDHEALLALLEALPSPEAAFALSRKLRDHIALEEALYYPTLSPGRRRERLLEHRILLELLEELGTALREGRTVQGVVERLKTAFLAHSEAELEA
SIO_010081: AV541_RS10920
subclass of: SO_0000673
so part of: AV541_RS10920
location: complement(133887..134453)
location: region:133887-134453:-1
so has part: feature:133887-134453:-1:exon

WP_008633684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133887-134453:-1:exon

AV541_RS10925
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10925
old locus tag: AV541_10930
so part of: sequence
location: complement(134437..134742)
location: region:134437-134742:-1
so has part: feature:134437-134742:-1:exon
subclass of: SO_0000010

position:134437:-1
position: 134437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134742:-1
position: 134742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134437-134742:-1:exon

AV541_RS10925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10925
old locus tag: AV541_10930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630608.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIQEALALLARPTSPRELAQALGVRQETAELLLRQLAARGYARPLGCGTACDLCAFRGMCRPGEAYWVRLDPGHGGAPGGRKKLAFGAKDPEERRQDGGTL
SIO_010081: AV541_RS10925
subclass of: SO_0000673
so part of: AV541_RS10925
location: complement(134437..134742)
location: region:134437-134742:-1
so has part: feature:134437-134742:-1:exon

WP_008633682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134437-134742:-1:exon

AV541_RS12900
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12900
pseudo: true
so part of: sequence
location: complement(<134880..135026)
location: region:134880-135026:-1
so has part: feature:134880-135026:-1:exon
subclass of: SO_0000010

position:134880:-1
position: 134880
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:135026:-1
position: 135026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134880-135026:-1:exon

AV541_RS12900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12900
inference: COORDINATES: protein motif:HMM:NF019292.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AV541_RS12900
subclass of: SO_0000673
so part of: AV541_RS12900
location: complement(<134880..135026)
location: region:134880-135026:-1
so has part: feature:134880-135026:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134880-135026:-1:exon

AV541_RS12905
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12905
pseudo: true
so part of: sequence
location: complement(<135136..135237)
location: region:135136-135237:-1
so has part: feature:135136-135237:-1:exon
subclass of: SO_0000010

position:135136:-1
position: 135136
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:135237:-1
position: 135237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135136-135237:-1:exon

AV541_RS12905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12905
inference: COORDINATES: protein motif:HMM:NF019292.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AV541_RS12905
subclass of: SO_0000673
so part of: AV541_RS12905
location: complement(<135136..135237)
location: region:135136-135237:-1
so has part: feature:135136-135237:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:135136-135237:-1:exon

AV541_RS12910
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12910
so part of: sequence
location: complement(135425..135781)
location: region:135425-135781:-1
so has part: feature:135425-135781:-1:exon
subclass of: SO_0000010

position:135425:-1
position: 135425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135781:-1
position: 135781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135425-135781:-1:exon

AV541_RS12910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12910
inference: COORDINATES: protein motif:HMM:NF019292.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside recognition domain-containing protein
translation: METVLSFTPVLFLLYLALALLETSGFLARMAFVTDRLMRWAGLPGKAFIPLILGFGCNVPAVYATQALAHPLDRLRVALAIPSWPAGRGCRPSPFSPSPSFPKTPPWWSSASTSWGSA
SIO_010081: AV541_RS12910
subclass of: SO_0000673
so part of: AV541_RS12910
location: complement(135425..135781)
location: region:135425-135781:-1
so has part: feature:135425-135781:-1:exon

WP_008633680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135425-135781:-1:exon

AV541_RS10935
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10935
old locus tag: AV541_10940
so part of: sequence
location: complement(135978..136631)
location: region:135978-136631:-1
so has part: feature:135978-136631:-1:exon
subclass of: SO_0000010

position:135978:-1
position: 135978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136631:-1
position: 136631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135978-136631:-1:exon

AV541_RS10935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10935
old locus tag: AV541_10940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008633679.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Crp/Fnr family transcriptional regulator
translation: MELAQVPLFRDLAPEDLEALERAAQRRLLGKGEVLFLEGEPVRALFVVKRGLIKVYKLDPEGRKQVVLHVEGPGRVLAEVALFLERPTYPASAEALEESEVLAIPKERFFQLLEVRPQLARSLIRYLARRQERLLHLLDRLVFHEVRERLCEFLLERLAEEGQGFRLPTNSELAALLGTVPEAVSRNLGELYRRGLIRLAGRRVEVPDPEALRALIR
SIO_010081: AV541_RS10935
subclass of: SO_0000673
so part of: AV541_RS10935
location: complement(135978..136631)
location: region:135978-136631:-1
so has part: feature:135978-136631:-1:exon

WP_060384893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135978-136631:-1:exon

AV541_RS12915
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12915
so part of: sequence
location: complement(136636..137637)
location: region:136636-137637:-1
so has part: feature:136636-137637:-1:exon
subclass of: SO_0000010

position:136636:-1
position: 136636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137637:-1
position: 137637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136636-137637:-1:exon

AV541_RS12915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12915
inference: COORDINATES: protein motif:HMM:NF015649.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BTAD domain-containing putative transcriptional regulator
translation: MALEQHLHRGEVSQARHNLLKELKRFSKATGVRVATRGGERLELGLVPTCAMRDCPAWRGEVVGFKNGLPDCPEAEGRSRICFPLWARGEVVAVGTLFHARPPKPPTGPAAPVLWLARLATPLLFIPLPEEPPELEVYALGGFRVCYRGQELSPKSFGRTGAFRLLKFLLANKERALYADELCETFFPHLPPDKARQELYTLVYHLRKTLPGIVEREGAYYRLHLPEKRFLDFERFEELMRKADLEEGLSAFKTLRQALELYKGPLFGDDPYGEWAEAERAYLQERALSGLLRLGDLAEALGYKEVAKEAYARALRLEPFLEEARARLLALRG
SIO_010081: AV541_RS12915
subclass of: SO_0000673
so part of: AV541_RS12915
location: complement(136636..137637)
location: region:136636-137637:-1
so has part: feature:136636-137637:-1:exon

WP_244880694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136636-137637:-1:exon

AV541_RS12920
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS12920
so part of: sequence
location: complement(137535..138059)
location: region:137535-138059:-1
so has part: feature:137535-138059:-1:exon
subclass of: SO_0000010

position:137535:-1
position: 137535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138059:-1
position: 138059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137535-138059:-1:exon

AV541_RS12920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS12920
inference: COORDINATES: protein motif:HMM:NF013736.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GAF domain-containing protein
translation: MGTLRKALGMEAAELFLADPEGHHLILTAYEGLHRKAFLEKPWFQLGEGYPGIVALKREPLYTHALQQDARYLRQKVKQLGYQTYISYPLELPQGLIGVLNLASRDPGPSTRRPWTPFPASVPFSPAPSTPFLPAWGRRGSWPWSNTSIGARSARPGTTFSRNSSASAKPRASG
SIO_010081: AV541_RS12920
subclass of: SO_0000673
so part of: AV541_RS12920
location: complement(137535..138059)
location: region:137535-138059:-1
so has part: feature:137535-138059:-1:exon

WP_238530132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137535-138059:-1:exon

AV541_RS10945
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10945
old locus tag: AV541_10950
pseudo: true
so part of: sequence
location: 138534..139324
location: region:138534-139324:1
so has part: feature:138534-139324:1:exon
subclass of: SO_0000010

position:138534:1
position: 138534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139324:1
position: 139324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138534-139324:1:exon

AV541_RS10945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10945
old locus tag: AV541_10950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630612.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cytochrome c
SIO_010081: AV541_RS10945
subclass of: SO_0000673
so part of: AV541_RS10945
location: 138534..139324
location: region:138534-139324:1
so has part: feature:138534-139324:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138534-139324:1:exon

AV541_RS10950
type: Gene
subclass of: SO_0000704
RO_0002162: 456163
locus tag: AV541_RS10950
old locus tag: AV541_10955
so part of: sequence
location: 139327..142917
location: region:139327-142917:1
so has part: feature:139327-142917:1:exon
subclass of: SO_0000010

position:139327:1
position: 139327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142917:1
position: 142917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139327-142917:1:exon

AV541_RS10950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 456163
locus tag: AV541_RS10950
old locus tag: AV541_10955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016329282.1
GO component: GO:0009325 - nitrate reductase complex [Evidence IEA]
GO function: GO:0008940 - nitrate reductase activity [Evidence IEA]
GO process: GO:0009061 - anaerobic respiration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrate reductase subunit alpha
translation: MKDWIKEVENPAERKWEEFYRNRFQHDKRVRTTHGVNCTGSCSWEVFVKDGIVTWELQATDYPSLEAGLPPYEPRGCQRGISFSWYLYSPIRVKYPYARGALLDLWREAKRQNPDPVAAWEAIQQDPHKRKRYQKARGKGGFRRASWEEVLELIAAAVVSTVKRYGPDRVIGFSPIPAMSQISYAAGSRFLSLLGGVPLSFYDWYCDLPNASPEIWGEQTDVHESADWYNARFIAVMGSNLNMTRTPDTHFIAEVRHAGAKLTVFSPDFSQVSKYADWWIPIHPGQDGAFWMAVNHVLLKEYYADREVPYFQDYLKRYTDAPLLIEIREGRPGRYLRANRLSEYAEEENGDFKLLIFDETKGPRMPGGTLGFRWQKEKGKWNLKLEDPKTGEPLSPRLTLLGVEDEVVLVEFDDFASDQKLRRGVPVKYVTTKEGEKVAVATVFDLLMAQFGVGRGLPGDYPRDYGDDLPYTPAWQEKWTGIHRETLLRYARAWGENGLKTKGKNLIIIGAGINHWYHNNLMYRAGIVALMLTGSVGVNGGGLAHYVGQEKLANQASWGPIAFATDWGYPPRQQNTPSFHYVHSDQWRYERGFAAYDKTAQGLSDHTIDHQVRAVRKGWLPFFPQFNKNPLQVVAEAEAKGAKTEAEIVQYVVEALKRGELKFAVEDPDAPENWPRVWFIWRGNAIGTSAKGHEYFLKHYLGTHTNTIAEEKAEGQVQEVVYRKPAPEGKLDLVVDLNFRMDTSALYSDIVLPAATWYEKDDLNTTDLHTFINPLQAAVPPAWESKPDWEIFKAVAKKVSELARVHLPKPVKDLVMIPLQHDTPDELAQTEDRDWKKGEVEAIPGKTMPKFRVVERDYTLLYEKMVTLGPAVEKNGVGMHGLTIPVEDFYRELAERQPRFFQGEKRPSLEEAKEVAEAILLLDPVSNGELAYRAFLDEEKKTGVKLTDLAEGNRNVRISFKDIVAQPRRQLTTPTWSAIINHGRAYSPYTLNVERQIPWRTLTGRQHFYLDHPNYLAFGEHLPTYKPRPDVLMLQETEKSALEAQGKLLNYITPHGKWSIHSTYSENRHMMTLSRGGYPVWLNDKDAAELGIQDNDWVELFNDNGVFVQRAIVSARIPRGTVFVYHATERTVGIPKSPLRGKRAGMNNSITRARLKPVLMSGGYAQFTYAFNYWGPVGVNRDTWVYVRKLEKPPEW
SIO_010081: AV541_RS10950
subclass of: SO_0000673
so part of: AV541_RS10950
location: 139327..142917
location: region:139327-142917:1
so has part: feature:139327-142917:1:exon

WP_060384894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139327-142917:1:exon