Psychrobacter urativorans strain R310.10B plasmid 5, complete sequence.
type: Entry
definition: Psychrobacter urativorans strain R310.10B plasmid 5, complete sequence.
sequence version: NZ_CP012711.1
sequence date: 2023-02-05
sequence: sequence
division: CON
label: NZ_CP012711.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN04076494
keyword: RefSeq
source: Psychrobacter urativorans
organism: Psychrobacter urativorans
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales; Moraxellaceae; Psychrobacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP012711.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/05/2023 19:09:38\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,519\nCDSs (total) :: 2,445\nGenes (coding) :: 2,418\nCDSs (with protein) :: 2,418\nGenes (RNA) :: 74\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 52\nncRNAs :: 4\nPseudo Genes (total) :: 27\nCDSs (without protein) :: 27\nPseudo Genes (ambiguous residues) :: 0 of 27\nPseudo Genes (frameshifted) :: 10 of 27\nPseudo Genes (incomplete) :: 16 of 27\nPseudo Genes (internal stop) :: 10 of 27\nPseudo Genes (multiple problems) :: 7 of 27\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 49020
topology: circular
so has quality: SO_0000988
location: 1..49020
location: region:1-49020:1
RO_0002162: 45610

NZ_CP012711
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN04076494
type: BioSample
SIO_000068: biosample

1
title: Complete genome of Psychrobacter urativorans R10.10B
author: See-Too, W.S.
author: Chan, K.G.
journal: Unpublished

2
title: Direct Submission
author: See-Too, W.S.
author: Chan, K.G.
journal: Submitted (21-SEP-2015) University of Malaya, Level 1, Microbiome Lab, HIR Building, Kuala Lumpur 50603, Malaysia

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49020:1
position: 49020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-49020:1:source
so part of: sequence
organism: Psychrobacter urativorans
mol type: genomic DNA
strain: R310.10B
isolation source: soil
plasmid: 5
country: Antarctica
collection date: 2010-12-15
collected by: Wah Seng See-Too

45610
type: Taxonomy
SIO_000068: taxonomy

AOC03_RS12290
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12290
old locus tag: AOC03_12270
so part of: sequence
location: complement(126..983)
location: region:126-983:-1
so has part: feature:126-983:-1:exon
subclass of: SO_0000010

position:126:-1
position: 126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983:-1
position: 983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126-983:-1:exon

AOC03_RS12290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12290
old locus tag: AOC03_12270
EC number: 3.1.21.-
inference: COORDINATES: protein motif:HMM:NF013579.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: restriction endonuclease subunit S
translation: MSEADYEKLFSTESKAQRRPRDGDILIGIIGTFGNAYRYKKGDIFGISSSIAIICPDIEILDSDFLYYVVTGDVFKAIHLAYKSGSVQGYTNIPTIKELPLLIPPLPKQKAIAHILGSLDDKIELNRQMNETLEAMAQALFKSWFVDFDPVLDNALAAGNPIPDELSARDEQRQAIPKTDTNNHAIRALFPDAFEFTEEMGWILEGWNITKVLDVSEKLTKGTTPSKADLSKAKDEAIIPFLKVMNIDNNGFIKAERLENIPKSIHEGSLKRSIVREDDVLFSIA
SIO_010081: AOC03_RS12290
subclass of: SO_0000673
so part of: AOC03_RS12290
location: complement(126..983)
location: region:126-983:-1
so has part: feature:126-983:-1:exon

WP_084785925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126-983:-1:exon

AOC03_RS12295
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12295
old locus tag: AOC03_12275
pseudo: true
so part of: sequence
location: complement(1127..2713)
location: region:1127-2713:-1
so has part: feature:1127-2713:-1:exon
subclass of: SO_0000010

position:1127:-1
position: 1127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2713:-1
position: 2713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1127-2713:-1:exon

AOC03_RS12295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12295
old locus tag: AOC03_12275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011280154.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: class I SAM-dependent DNA methyltransferase
SIO_010081: AOC03_RS12295
subclass of: SO_0000673
so part of: AOC03_RS12295
location: complement(1127..2713)
location: region:1127-2713:-1
so has part: feature:1127-2713:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1127-2713:-1:exon

AOC03_RS12300
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12300
old locus tag: AOC03_12280
so part of: sequence
location: 3244..4155
location: region:3244-4155:1
so has part: feature:3244-4155:1:exon
subclass of: SO_0000010

position:3244:1
position: 3244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4155:1
position: 4155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3244-4155:1:exon

AOC03_RS12300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12300
old locus tag: AOC03_12280
inference: COORDINATES: protein motif:HMM:NF013235.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MENNLVAKSNDLVVASYALTRHEQNLLLACVSQINSLPDAPIVSIESRFIVTVEQIKGLFYRGSTERNAYRDLKKAADHLFEREVTIKLDNDETLRTRFVSSVKFQPNDAQVTLRFAEDILPYLTQLKNNFTRYRLADTVELTSVYAVRLYEMIVCWQGQNRWSETLELDDFRYMMGVEDKYRQFSNLRDRVLNTAVEQINENTNYNVTVSYRKVKREHRSVTFAFYKKGALLLTDDKGALSLDKIRRIVRSSQFTADYNDHRLLSVEARESNEAFWARAEQLIAERPKEFSKRPFDDYFKSK
SIO_010081: AOC03_RS12300
subclass of: SO_0000673
so part of: AOC03_RS12300
location: 3244..4155
location: region:3244-4155:1
so has part: feature:3244-4155:1:exon

WP_062536897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3244-4155:1:exon

AOC03_RS12305
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12305
old locus tag: AOC03_12285
so part of: sequence
location: 4314..4952
location: region:4314-4952:1
so has part: feature:4314-4952:1:exon
subclass of: SO_0000010

position:4314:1
position: 4314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4952:1
position: 4952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4314-4952:1:exon

AOC03_RS12305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12305
old locus tag: AOC03_12285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011512344.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family partition ATPase
translation: MKVIAVLNQKGGSGKTTIATQIARGLQLQGHSVLLVDSDKQGSARDWRAVDEDNPVPVIGLDRPTLDKDLKSVSDKDYVVIDGSPQATSLAISAIKAADFILIPVQPSPYDIWATSDLVDLVQQRIEVMDGQLKAAFVVSRAIQNTNIGKEVATALLDYGLPVLDTRIMQRVAYPNSAAIGKTVFDTESPNSNAIQEMTALVNEIKTFFIEE
SIO_010081: AOC03_RS12305
subclass of: SO_0000673
so part of: AOC03_RS12305
location: 4314..4952
location: region:4314-4952:1
so has part: feature:4314-4952:1:exon

WP_062536899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4314-4952:1:exon

AOC03_RS12310
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12310
old locus tag: AOC03_12290
so part of: sequence
location: 4956..5165
location: region:4956-5165:1
so has part: feature:4956-5165:1:exon
subclass of: SO_0000010

position:4956:1
position: 4956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5165:1
position: 5165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4956-5165:1:exon

AOC03_RS12310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12310
old locus tag: AOC03_12290
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLAAGRPSKKVDSELSLSDVTDRPTKTVRVNFNLDEEMYIKLKKHALDSRKTVTQLLTEMIDEKVIER
SIO_010081: AOC03_RS12310
subclass of: SO_0000673
so part of: AOC03_RS12310
location: 4956..5165
location: region:4956-5165:1
so has part: feature:4956-5165:1:exon

WP_062536901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4956-5165:1:exon

AOC03_RS12315
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12315
old locus tag: AOC03_12295
so part of: sequence
location: 5951..6607
location: region:5951-6607:1
so has part: feature:5951-6607:1:exon
subclass of: SO_0000010

position:5951:1
position: 5951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6607:1
position: 6607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5951-6607:1:exon

AOC03_RS12315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12315
old locus tag: AOC03_12295
inference: COORDINATES: protein motif:HMM:NF019349.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MSGKFSKSSLKQQIAEEIKKMIFEGKLEQGEKITELQVSQSLGVSRTSVREAVLLLEQEGLLISEPYKDTRVTTITQEEVLEILIPMRLQIEIFALKKGFSVWGEKTKTQFRAILEEMKKAIFYEDLLTFIELDIQLHGLIVQSSGLENVIRIWESIVNRIRLHFLHQNSRSGTLEKWLVEHEELINVLVNGSSVDEAIEALRSHIVDTNLPDVYLLD
SIO_010081: AOC03_RS12315
subclass of: SO_0000673
so part of: AOC03_RS12315
location: 5951..6607
location: region:5951-6607:1
so has part: feature:5951-6607:1:exon

WP_062536903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5951-6607:1:exon

AOC03_RS12320
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12320
old locus tag: AOC03_12300
so part of: sequence
location: 6666..7802
location: region:6666-7802:1
so has part: feature:6666-7802:1:exon
subclass of: SO_0000010

position:6666:1
position: 6666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7802:1
position: 7802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6666-7802:1:exon

AOC03_RS12320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12320
old locus tag: AOC03_12300
inference: COORDINATES: protein motif:HMM:NF024771.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mandelate racemase/muconate lactonizing enzyme family protein
translation: MKLEIDKIDVFVVAGPDAKYKTSSHYDDLVITNTIVRIRTADGYEGFGAAISWTEGGIDKSLAESIRHLLPFLIGKSALHREAIYSLMASRCVQMKPQALSPIDIALWDLVAKFAKMPLYQMLGGARNKILSYASTPFLPTIQAYIKHVQDLKNQGYKIIKFHTWCIFEKDMALVAAIHEVFKDSGLKFMMDVESAYTREEALKAARILEKHDYIWFEAPLSDTDLEGYRDLKSRVDIPILAAGNTLLYLNQIEQGIQNNGWSSVRVDATLAGGITQTQKIMGLAEANSMTVELQSWGYTLSQAANLHLMLAYNNSTYFEQAVPVEPLEFGALTTIRTDKEGYVHAPDGNGLGIEMDWTLIEQASSYKITLDTTGWTA
SIO_010081: AOC03_RS12320
subclass of: SO_0000673
so part of: AOC03_RS12320
location: 6666..7802
location: region:6666-7802:1
so has part: feature:6666-7802:1:exon

WP_062536905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6666-7802:1:exon

AOC03_RS12325
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12325
old locus tag: AOC03_12305
so part of: sequence
location: 7902..9017
location: region:7902-9017:1
so has part: feature:7902-9017:1:exon
subclass of: SO_0000010

position:7902:1
position: 7902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9017:1
position: 9017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7902-9017:1:exon

AOC03_RS12325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12325
old locus tag: AOC03_12305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007466982.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mandelate racemase/muconate lactonizing enzyme family protein
translation: MKIVDIEVISLRVPALDQACEWGEDALIVRVITDTGLVGIGESDTSPLVAKAIIEAPNSNLYCSGLKALLLGESPLEIQKLWDKMYWGSNYLGRRGAGIHAMSAIDIALWDIASQYHQVPIHILLGGKYRDKIRAYGTFIPADIPDDNRVIARKLKEKGFTSLKFGGGIMGNDPITDYELVKAVREELGDDFELQIDLASKWNTYSHSADMFKKLESFHLNWIEEPVLADDMKGYLKLAKLAVTKIAGGESLTTRYEFEDFIRQAQPDIIQPDITRCGGISEMRIINNIAEMNGVKMIPHGFSTGILLAATVQFLAATKYGDLIEYSQSESPLFTKLVKNLLPLEEGHVRVLDTIGLGVELDENIMELYKI
SIO_010081: AOC03_RS12325
subclass of: SO_0000673
so part of: AOC03_RS12325
location: 7902..9017
location: region:7902-9017:1
so has part: feature:7902-9017:1:exon

WP_062536907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7902-9017:1:exon

AOC03_RS12330
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12330
old locus tag: AOC03_12310
so part of: sequence
location: 9069..10646
location: region:9069-10646:1
so has part: feature:9069-10646:1:exon
subclass of: SO_0000010

position:9069:1
position: 9069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10646:1
position: 10646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9069-10646:1:exon

AOC03_RS12330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12330
old locus tag: AOC03_12310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007715952.1
GO function: GO:0015652 - quaternary ammonium group:proton symporter activity [Evidence IEA]
GO process: GO:0015697 - quaternary ammonium group transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BCCT family transporter
translation: MSRQVDKLLISVSIALVVIVVGALYLQPEQSQVVAGAIFGKMTEWFGSGVLIFTFLGVLLLAFVATSKYGNIRFGEEAPEYSNFKWISMMIACGLGSATVYWAFVEWAYYIETPGLGIEANSQKAYEMSLPYNMFHWGFSAWTLYALVALPICYHLYVRKNAGLSLSAIVSAITGIKQSGVLGRIIDVIFIFICFGALSITLGVSVPLVNNVLSTVLGIEPSFTMNIVLILIISVVYSLSSYIGLQKGMSNLADFTTKLALLLCVGVLVLGPTNFIIANTTNSLGLMLQNFVQMSLFTDPIGKSGFPQSWTIFYWLYWITYAPFTGIFIAKVSKGRTLRSVVINTLISGSAGCFLFFGIIGSLTIDRQLTGLVDVVGMLGAGQDNNAIIAVLQTLPFSSAFMILFCAISVLFLATTLDGAAFTMASTATPKLQGNEEPHPVHRLFWCVMLALVPLTMIFIGASLDTIKTSAIITGIPILFIMILIIVGWLKWMVKDFGDVPSDKIAEVCASGIKETRPKELNEKG
SIO_010081: AOC03_RS12330
subclass of: SO_0000673
so part of: AOC03_RS12330
location: 9069..10646
location: region:9069-10646:1
so has part: feature:9069-10646:1:exon

WP_084785929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9069-10646:1:exon

AOC03_RS12945
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12945
pseudo: true
so part of: sequence
location: complement(10897..>11103)
location: region:10897-11103:-1
so has part: feature:10897-11103:-1:exon
subclass of: SO_0000010

position:10897:-1
position: 10897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11103:-1
position: 11103
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10897-11103:-1:exon

AOC03_RS12945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006811352.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: resolvase
SIO_010081: AOC03_RS12945
subclass of: SO_0000673
so part of: AOC03_RS12945
location: complement(10897..>11103)
location: region:10897-11103:-1
so has part: feature:10897-11103:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10897-11103:-1:exon

AOC03_RS12335
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12335
old locus tag: AOC03_12315
pseudo: true
so part of: sequence
location: complement(11142..>11753)
location: region:11142-11753:-1
so has part: feature:11142-11753:-1:exon
subclass of: SO_0000010

position:11142:-1
position: 11142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11753:-1
position: 11753
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11142-11753:-1:exon

AOC03_RS12335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12335
old locus tag: AOC03_12315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611460.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase core domain-containing protein
SIO_010081: AOC03_RS12335
subclass of: SO_0000673
so part of: AOC03_RS12335
location: complement(11142..>11753)
location: region:11142-11753:-1
so has part: feature:11142-11753:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11142-11753:-1:exon

AOC03_RS12340
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12340
old locus tag: AOC03_12320
so part of: sequence
location: complement(12048..12740)
location: region:12048-12740:-1
so has part: feature:12048-12740:-1:exon
subclass of: SO_0000010

position:12048:-1
position: 12048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12740:-1
position: 12740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12048-12740:-1:exon

AOC03_RS12340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12340
old locus tag: AOC03_12320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011280161.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIAIVLAIAASMGTSSVYAGFGSLSKMASSLSESVTGVSSSNMDINGFFTQAKATNVMFTQSRTALASLLASKQDSDELKAKQKSLKTTSDLKEKDAIEKQIVALSNTVLEASQKDEEGTVAKLAALNAEQKTHLLDSATNFAIASLTARELALGAKQVSTGLISNPKSLTNTGMSLVDAKGVIGDITGIAKNSTMALVEYPKLFKKAGIEFKMPTSSSDKPKVLSDI
SIO_010081: AOC03_RS12340
subclass of: SO_0000673
so part of: AOC03_RS12340
location: complement(12048..12740)
location: region:12048-12740:-1
so has part: feature:12048-12740:-1:exon

WP_062536909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12048-12740:-1:exon

AOC03_RS12345
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12345
old locus tag: AOC03_12325
so part of: sequence
location: complement(12753..14780)
location: region:12753-14780:-1
so has part: feature:12753-14780:-1:exon
subclass of: SO_0000010

position:12753:-1
position: 12753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14780:-1
position: 14780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12753-14780:-1:exon

AOC03_RS12345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12345
old locus tag: AOC03_12325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011280160.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPMLVSAWANANIQIYPSKGIFGLEQGCRTNPSKYEANGSSIVCDFSQAIDNEIIRKQAEQFFVQGLKQNFGEQVVDTISQKTKNRTYIASLEVLRASEYIVKKDSTAEIFLPVTLSLKLTNVLSGEVIYSDSATLSQPIQVLTTEIDSPTTKTAIKQKFQSTLLTLTKQVTEELKSKLKISETETQVIDKWKSYLVLDKGFKQGIAAQDELSSIDGDLIRVVHADSDYAVALPILMQGRSKRFSKVSTNTRQAINKPKALVVDVLTYQGESKDLIEQIFSDAVGEQASFTLTPVNRRYSAMAQSVSEQTVLAQSEDINQRELPEFFIRINVIPVIAYQQQIGKITQQQVLHSEVFGEMIDRSGRVIYSAHATDDIKDVISEGMGFSLEARKEVVLKNALLKLGQQFQKGIQFTRSDLKVSSSSGQRITIDDAGERLSTGMKVHVYHSDKATGRNILIPTWEATVLERQGAKVTAQLDFPVNSSDRLPVRSGDRVLLDSSAPVGDSKQSRVLCPSLHTEQVGEIPFYGFGPLIYHAFTSQSKRPFYATGSGFKGQTLLKDAVVAMTENAGFKKDMKVNFYIPKDECLQPVLKTEVKQDSIKCNADKSNCDATLVMASGARIFNQKSEKIGAYGLQQEIRLKGIDHQHRHEMYNIQMFETLPKILNQIVQKADSSK
SIO_010081: AOC03_RS12345
subclass of: SO_0000673
so part of: AOC03_RS12345
location: complement(12753..14780)
location: region:12753-14780:-1
so has part: feature:12753-14780:-1:exon

WP_084785928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12753-14780:-1:exon

AOC03_RS12350
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12350
old locus tag: AOC03_12330
so part of: sequence
location: complement(14804..16309)
location: region:14804-16309:-1
so has part: feature:14804-16309:-1:exon
subclass of: SO_0000010

position:14804:-1
position: 14804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16309:-1
position: 16309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14804-16309:-1:exon

AOC03_RS12350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12350
old locus tag: AOC03_12330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011280159.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKAILILLCLGVVQVSNAEIIKVHGEGATPIIKKDLNGTRNQAYNNAKTDAVIALIKRINGPQAMNEASQYLNDIVKQIDSNYVLNRGSSTNSNNELVTQVSLEIDDQEFRSILNDLGLAKKNGRTSPIMIVMDEYFGVPKDNAKPVKEFTSYFADRSYSYNEDASYKASESAKASASDSYSTKGRSAAASGYAYDNYYGAGVGVSARSASHNNSGKSASSSSYNASESAKYSQSESQNDIQSFVKYVEYQTPSTKAERNNQTLNAIASAASRYDLRLLDSDRFRSQYLNGRSMTIQQLMSDVELNKLVIAARKEKADWFMAGSSYIYDRGRSSATGQFVCDGAVSFKIYSVDDSTLMGGETRTESSTGATTDSCRTNVAKKLGELAVSQVGPQILGYAKNRSMYGKEITVFVKSVSGNVSSRLGDDLYIALDEMDGAENIDIRTQDGKLVEMTMTYKSDKPISAELAKALRKVSPTLSSAERLLAGNTITLCIGGTQCT
SIO_010081: AOC03_RS12350
subclass of: SO_0000673
so part of: AOC03_RS12350
location: complement(14804..16309)
location: region:14804-16309:-1
so has part: feature:14804-16309:-1:exon

WP_062536911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14804-16309:-1:exon

AOC03_RS12625
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12625
pseudo: true
so part of: sequence
location: 16995..18230
location: region:16995-18230:1
so has part: feature:16995-18230:1:exon
subclass of: SO_0000010

position:16995:1
position: 16995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18230:1
position: 18230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16995-18230:1:exon

AOC03_RS12625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611467.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: AOC03_RS12625
subclass of: SO_0000673
so part of: AOC03_RS12625
location: 16995..18230
location: region:16995-18230:1
so has part: feature:16995-18230:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16995-18230:1:exon

AOC03_RS12625
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 45610
locus tag: AOC03_RS12625
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01497
inference: COORDINATES: profile:INFERNAL:1.1.1
note: AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: AOC03_RS12625
subclass of: SO_0000673
so part of: AOC03_RS12625
location: 17222..17339
location: region:17222-17339:1
so has part: feature:17222-17339:1:exon

position:17222:1
position: 17222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17339:1
position: 17339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17222-17339:1:exon

AOC03_RS12365
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12365
old locus tag: AOC03_12345
so part of: sequence
location: complement(18372..19115)
location: region:18372-19115:-1
so has part: feature:18372-19115:-1:exon
subclass of: SO_0000010

position:18372:-1
position: 18372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19115:-1
position: 19115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18372-19115:-1:exon

AOC03_RS12365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12365
old locus tag: AOC03_12345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015963580.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MKDVIVITGAAQGLGEYIAKALISNGFRVAITDVNEQKVVETAKKLDSDADTAVGFKLDVTKKQDFEQVLANVEAHFGQVNGLVNNAALTLMTPVMEVTAEEFDKVINVNLRGTLFGCQVFGAYLAEKGYGRIVNMASLAGQNGGAAASVHYASSKGGILTMTKVFASNLAANGVTVNAVAPGPIDLPIVYELVPPEKLQHLLENVIPVKALGSPSFIGNIVAQLLQRDAFGVTGATWDMNGGLFMR
SIO_010081: AOC03_RS12365
subclass of: SO_0000673
so part of: AOC03_RS12365
location: complement(18372..19115)
location: region:18372-19115:-1
so has part: feature:18372-19115:-1:exon

WP_062536913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18372-19115:-1:exon

AOC03_RS12370
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12370
old locus tag: AOC03_12350
so part of: sequence
location: complement(19168..19527)
location: region:19168-19527:-1
so has part: feature:19168-19527:-1:exon
subclass of: SO_0000010

position:19168:-1
position: 19168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19527:-1
position: 19527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19168-19527:-1:exon

AOC03_RS12370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12370
old locus tag: AOC03_12350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007618742.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IacB protein
translation: MEKLESHRVLFCIGINQNFMDAPIEEMKQVWQAFSQMIQNIDELPGLNILGIMDDDRLQVGAASTAPWMAYIMADVPDIETIIAACNFFRTVPVGDGTYKLWKYCKIEARIGRELVVPE
SIO_010081: AOC03_RS12370
subclass of: SO_0000673
so part of: AOC03_RS12370
location: complement(19168..19527)
location: region:19168-19527:-1
so has part: feature:19168-19527:-1:exon

WP_062536915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19168-19527:-1:exon

AOC03_RS12375
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12375
old locus tag: AOC03_12355
so part of: sequence
location: complement(20086..20514)
location: region:20086-20514:-1
so has part: feature:20086-20514:-1:exon
subclass of: SO_0000010

position:20086:-1
position: 20086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20514:-1
position: 20514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20086-20514:-1:exon

AOC03_RS12375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12375
old locus tag: AOC03_12355
inference: COORDINATES: protein motif:HMM:NF014173.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rrf2 family transcriptional regulator
translation: MSITTRFSVGIHILAVLDIYQDEVTSSSFIASSVNTNPAVIRKIMSLLKAAGLIHVRAGVAGARLTKPPEQIPLLAVYEAVYADNKSQELFDVHQDTSERCLVGMHIQSAINPILHRVEEVLKEELEKSSLADVIEQIRNQQ
SIO_010081: AOC03_RS12375
subclass of: SO_0000673
so part of: AOC03_RS12375
location: complement(20086..20514)
location: region:20086-20514:-1
so has part: feature:20086-20514:-1:exon

WP_062536917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20086-20514:-1:exon

AOC03_RS12380
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12380
old locus tag: AOC03_12360
so part of: sequence
location: 20762..21403
location: region:20762-21403:1
so has part: feature:20762-21403:1:exon
subclass of: SO_0000010

position:20762:1
position: 20762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21403:1
position: 21403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20762-21403:1:exon

AOC03_RS12380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12380
old locus tag: AOC03_12360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000689912.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent oxidoreductase
translation: MKIAIIGATGQSGRLIMQEALDRGHKVTAIVRSPEKLPQDSAIDVVAKDIFELTAADLTPYDVVINAFNATFGTEEQHATAGHVLIDALKGHTNTRLAVVGSGGSLFTDESHSERIHESVGFPAQFLDTALQMRKNLEELQSTSDLNWVYLSPCGLFDAQGKRTGRYATGSDVALVNSKGEAYTSYADFAIAMLDEIEQPEHRNERYAVVSES
SIO_010081: AOC03_RS12380
subclass of: SO_0000673
so part of: AOC03_RS12380
location: 20762..21403
location: region:20762-21403:1
so has part: feature:20762-21403:1:exon

WP_062536918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20762-21403:1:exon

AOC03_RS12385
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12385
old locus tag: AOC03_12365
so part of: sequence
location: 21836..23077
location: region:21836-23077:1
so has part: feature:21836-23077:1:exon
subclass of: SO_0000010

position:21836:1
position: 21836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23077:1
position: 23077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21836-23077:1:exon

AOC03_RS12385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12385
old locus tag: AOC03_12365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004279329.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
translation: MRAIPYKSIVSALLLICIAAFLAFRWWQGPLLPSYSISSMPLVQTVVATGRVVAVSRTEIGSEVAGVVLERLVQEGEQVAAGDLLLVLSSDEVTAQVRQAEAALAELISSNRPQAAVDLVNAEVALAQATRNVERRRELVAISAISDEEMEQAIQAQAQARNNLENARLKAKALSSGGVEEDLLRARIAALQAQLNKTQVRSKVSGTILTRNVEIGDLVQPGQSLFTIALDGNTEIRVPLDERNLSRLAVQQQAIAISDAYPDKPFPVRISFIAPTIDPQRGTVEVRLAVDPVPDFLRQDMTVSVNIETDRRAKALVIPNDALANVKESNAEVLLLRNGQVQRQQVRLGLRGLSASEVLSGLSAGDEILVDATASLADGARVRTKLQAAPFANTDADKIMRANNKSQSAETVN
SIO_010081: AOC03_RS12385
subclass of: SO_0000673
so part of: AOC03_RS12385
location: 21836..23077
location: region:21836-23077:1
so has part: feature:21836-23077:1:exon

WP_062536920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21836-23077:1:exon

AOC03_RS12390
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12390
old locus tag: AOC03_12370
so part of: sequence
location: 23074..24345
location: region:23074-24345:1
so has part: feature:23074-24345:1:exon
subclass of: SO_0000010

position:23074:1
position: 23074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24345:1
position: 24345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23074-24345:1:exon

AOC03_RS12390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12390
old locus tag: AOC03_12370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017397681.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MTAFFGRLWIEATIAISFLREGRIQSLMITLGVAIGVAVIIFITALIQGLQTNLIDSTLGSQAHIRLVSPDEVNLIAPPADDTLQLIQEDKRPQRLRSINNWQQITDTLDQQPLLKAVSPNVSGPGFVRRGEALESVILVGTDLERYQQIIPLNEYLISGELRVGADNVLIGSELAKSLGVEVGSKLRLDTGQDDGDSSPSNNLSNKLSSNSAVVNIAGIFELGVRELDARYVYLDLKQAQSLLGLPGGITVIDLTVEDIFEAEKIAAQVGRLTSLQAESWIKTNAQLLNGLTAQSLSSNMIVGFVAISVAFGIASVLSVSVVQRTREIGILRAMGATRQQILRIFLFQGAVFGLLGSIVGSGVSYVLVWSFNTFGPNIFTIPISINLILVTMSLATLTGVIAAAIPARRAAALDPVVAIRYV
SIO_010081: AOC03_RS12390
subclass of: SO_0000673
so part of: AOC03_RS12390
location: 23074..24345
location: region:23074-24345:1
so has part: feature:23074-24345:1:exon

WP_157049365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23074-24345:1:exon

AOC03_RS12395
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12395
old locus tag: AOC03_12375
so part of: sequence
location: 24410..25117
location: region:24410-25117:1
so has part: feature:24410-25117:1:exon
subclass of: SO_0000010

position:24410:1
position: 24410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25117:1
position: 25117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24410-25117:1:exon

AOC03_RS12395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12395
old locus tag: AOC03_12375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004651339.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSSQYHEVLRLEALKKSYNIGQPNEIEVLHGIDLTINNNDFAALIGPSGSGKSTLLNVLGLLDQPTSGELYLLGQATSAMNDAGRTALRGSSIGFVFQFHHLIQAFSALDNILMPLTLTQGRPDKFAIQKAHELLAAVGLERFADSKPNELSGGQQQRVAIARALITQPALLLADEPTGNLDTVTAGEVFELFRKVNQERDCAVLLVTHDPRLSASCDRTINLVDGRIESDTLNN
SIO_010081: AOC03_RS12395
subclass of: SO_0000673
so part of: AOC03_RS12395
location: 24410..25117
location: region:24410-25117:1
so has part: feature:24410-25117:1:exon

WP_062536956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24410-25117:1:exon

AOC03_RS12735
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12735
so part of: sequence
location: complement(25384..25521)
location: region:25384-25521:-1
so has part: feature:25384-25521:-1:exon
subclass of: SO_0000010

position:25384:-1
position: 25384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25521:-1
position: 25521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25384-25521:-1:exon

AOC03_RS12735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12735
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPQNKGVESNKLPKDYPFLANDADWDDIFAVVVETFKDKADDLDR
SIO_010081: AOC03_RS12735
subclass of: SO_0000673
so part of: AOC03_RS12735
location: complement(25384..25521)
location: region:25384-25521:-1
so has part: feature:25384-25521:-1:exon

WP_157049366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25384-25521:-1:exon

AOC03_RS12400
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12400
old locus tag: AOC03_12380
so part of: sequence
location: complement(25764..26324)
location: region:25764-26324:-1
so has part: feature:25764-26324:-1:exon
subclass of: SO_0000010

position:25764:-1
position: 25764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26324:-1
position: 26324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25764-26324:-1:exon

AOC03_RS12400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12400
old locus tag: AOC03_12380
inference: COORDINATES: protein motif:HMM:NF015378.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PepSY domain-containing protein
translation: MKTLSMFSKSIVMALGMVAAGSATISIAQAATPTLKVSEAVAAAQSKISLEQAIAIGNKTIKGDLVSAEFDQKSYSVGGKYDVKFIAHDTEYKIRIDADTGEVLSAKQDQLDREDMAEYKAMKQAKVSLTQAMQKATQNVNGKIIKAGFDVDNGKSVYEIKVAKGNEIHKMVIDSMTGKVISNRLD
SIO_010081: AOC03_RS12400
subclass of: SO_0000673
so part of: AOC03_RS12400
location: complement(25764..26324)
location: region:25764-26324:-1
so has part: feature:25764-26324:-1:exon

WP_062536922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25764-26324:-1:exon

AOC03_RS12405
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12405
old locus tag: AOC03_12385
pseudo: true
so part of: sequence
location: complement(26488..27748)
location: region:26488-27748:-1
so has part: feature:26488-27748:-1:exon
subclass of: SO_0000010

position:26488:-1
position: 26488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27748:-1
position: 27748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26488-27748:-1:exon

AOC03_RS12405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12405
old locus tag: AOC03_12385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011959969.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ferredoxin reductase family protein
SIO_010081: AOC03_RS12405
subclass of: SO_0000673
so part of: AOC03_RS12405
location: complement(26488..27748)
location: region:26488-27748:-1
so has part: feature:26488-27748:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26488-27748:-1:exon

AOC03_RS12410
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12410
old locus tag: AOC03_12390
so part of: sequence
location: 28017..28625
location: region:28017-28625:1
so has part: feature:28017-28625:1:exon
subclass of: SO_0000010

position:28017:1
position: 28017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28625:1
position: 28625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28017-28625:1:exon

AOC03_RS12410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12410
old locus tag: AOC03_12390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012204557.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MNPYPKHLPADERRAVIIKSVVELAGTQNPSKITTAAIAKHMDLTQGALFRHFPNKEAIWQAVMEWMTDSLLTKIDGSTQGIESPLRAMEAMFMSHIEFVTEHPGVPRMVFGELQSAESTPAKLVVQSLIQRYGERLHLLIDKGKDSSELPSSLDKEAAAMLFIGTIQGLVMQSLLVGDVGRMQRDAPRVFRIYQRGIRDLQ
SIO_010081: AOC03_RS12410
subclass of: SO_0000673
so part of: AOC03_RS12410
location: 28017..28625
location: region:28017-28625:1
so has part: feature:28017-28625:1:exon

WP_062536924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28017-28625:1:exon

AOC03_RS12415
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12415
old locus tag: AOC03_12395
pseudo: true
so part of: sequence
location: 28622..29774
location: region:28622-29774:1
so has part: feature:28622-29774:1:exon
subclass of: SO_0000010

position:28622:1
position: 28622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29774:1
position: 29774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28622-29774:1:exon

AOC03_RS12415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12415
old locus tag: AOC03_12395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013263171.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
SIO_010081: AOC03_RS12415
subclass of: SO_0000673
so part of: AOC03_RS12415
location: 28622..29774
location: region:28622-29774:1
so has part: feature:28622-29774:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28622-29774:1:exon

AOC03_RS12420
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12420
old locus tag: AOC03_12400
so part of: sequence
location: 29771..30973
location: region:29771-30973:1
so has part: feature:29771-30973:1:exon
subclass of: SO_0000010

position:29771:1
position: 29771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30973:1
position: 30973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29771-30973:1:exon

AOC03_RS12420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12420
old locus tag: AOC03_12400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011805098.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MISLAGRDILHSWGKFVFTGIGLGLLIGVTLVMAGVYRGIVDDGKALLDNSGADLWVVQKDTLGPYAESSSINDDVYRTILAMPGVAQAANVTYLTTQVHKGESDVRTMVVGIAPGELGATPGWPPYLVAGRQITRAHYEAVADIATGFKLGDSVTIRRNDYIVVGLTRRMVSSSGDPMIFVPLKDAQEAQFLKNNDAILQNRRRTEANPAFNRPGVPGLLEAVIASQSTNSSVNAVLVTLEPGYAQNEVAESIQRWKRLTVYTRAQMEDILVGKLIATSAKQIAMFLVILAIVSAAIVAFIIYSLTMDKIREIAVLKLIGTRNRTIAAMIMQQALALGVIGFVVGKITATFAAPLFPKYVLLTPIDSVIGFFAVLVICILASIIAIRMALKVDPAEAIG
SIO_010081: AOC03_RS12420
subclass of: SO_0000673
so part of: AOC03_RS12420
location: 29771..30973
location: region:29771-30973:1
so has part: feature:29771-30973:1:exon

WP_062536926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29771-30973:1:exon

AOC03_RS12425
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12425
old locus tag: AOC03_12405
so part of: sequence
location: 30978..31688
location: region:30978-31688:1
so has part: feature:30978-31688:1:exon
subclass of: SO_0000010

position:30978:1
position: 30978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31688:1
position: 31688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30978-31688:1:exon

AOC03_RS12425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12425
old locus tag: AOC03_12405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019677824.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MTKKGIYIEGLSKSFGKGDTAVYALKDVNMHVEPGEVVGLIGPSGSGKSTLLKCLGAVIDPSAGRMMLGDQVIYDDGWKVRDLRALRRDKIGFVFQSPYLIPFLDVTDNVALLPMLAGVPNAEARAKALELLTALDVHQRAKAMPSQLSGGEQKRVAIARGLVNQPPVILTDEPTAALDSVRAMAVIRILNDMARKFETAIIVVTHDEKIIPTFKRIYHIRDGVTHEEVGEGREFE
SIO_010081: AOC03_RS12425
subclass of: SO_0000673
so part of: AOC03_RS12425
location: 30978..31688
location: region:30978-31688:1
so has part: feature:30978-31688:1:exon

WP_062536928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30978-31688:1:exon

AOC03_RS12430
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12430
old locus tag: AOC03_12410
so part of: sequence
location: 32513..33721
location: region:32513-33721:1
so has part: feature:32513-33721:1:exon
subclass of: SO_0000010

position:32513:1
position: 32513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33721:1
position: 33721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32513-33721:1:exon

AOC03_RS12430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12430
old locus tag: AOC03_12410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011280365.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4010 domain-containing protein
translation: MTASTAALGCGLLIGLERERSKQRENQHSFAGIRSFAICSLLGAICFSFGFFMGIIGALIVGGISIISINKQIEDPGVTTELAFILTYFIGGLCLWYIPYAAALTVVLTFLLMTKHSMHGVAVRWITELEFKNGIFLLALLLIALPLTPNRALWGSVLNPYIILKLLTLILAIQALAHMAKMLLPLRHAMLLSALASGFVSSTACVASLGMEVRHGRADAKENAGAALISCVATVVQLLIIVAGVSFSWLKILLFPSIIAIIILVIPAIWLMRKPRSGEKAKLADTPMFSLKEAGIIVVTLTIIQVLVYGLSLWLGDAGLVAGTVLSSMFEVHAAMAAVVMQGNPTNPILLLALLLGLATHAISKSINAAITGGFQYALAFVPTQIIHMTVLIILIYTMTNN
SIO_010081: AOC03_RS12430
subclass of: SO_0000673
so part of: AOC03_RS12430
location: 32513..33721
location: region:32513-33721:1
so has part: feature:32513-33721:1:exon

WP_062536958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32513-33721:1:exon

AOC03_RS12435
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12435
old locus tag: AOC03_12415
so part of: sequence
location: complement(34287..35201)
location: region:34287-35201:-1
so has part: feature:34287-35201:-1:exon
subclass of: SO_0000010

position:34287:-1
position: 34287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35201:-1
position: 35201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34287-35201:-1:exon

AOC03_RS12435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12435
old locus tag: AOC03_12415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019519775.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLRFIARHSTLIMPVCAIVGFVFPNLSNAILVYLPQILFFLMFFTLLGIDQYALLKRIATSYVWVFALLQSGGMSLVLTLIAYALGVRGDWLLAIAGLGATAPLFGSGALVNAVGFDAQLATAKTIAATLVMPCTLLGVLWLLGDENAHIDVGMYVNRLLVYIVMPMVLAVGVRRFVSPAVLSRYYPKIGQFNILLLMLFPLGLMAGFRTTFDHDPWQALLLLVLSSVLALVFYFTAYIIYRRFGYENAIVAALVCGGRNVLLAYTITAPFMGAVFLPLLGAFQLPAFCLPLLGKYMAKRHRT
SIO_010081: AOC03_RS12435
subclass of: SO_0000673
so part of: AOC03_RS12435
location: complement(34287..35201)
location: region:34287-35201:-1
so has part: feature:34287-35201:-1:exon

WP_062536931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34287-35201:-1:exon

AOC03_RS12440
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12440
old locus tag: AOC03_12420
so part of: sequence
location: 35921..36613
location: region:35921-36613:1
so has part: feature:35921-36613:1:exon
subclass of: SO_0000010

position:35921:1
position: 35921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36613:1
position: 36613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35921-36613:1:exon

AOC03_RS12440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12440
old locus tag: AOC03_12420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011768680.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyltransferase domain-containing protein
translation: MLSHRSNEKEILDLGPGNYTAEEFTHCQKMLFRINQILGTFHGTVNVLKKSGEKAHVMDVGCGAGLFILNLSRHFPKMTFHGIDISSEAIDMANHEKSVFTSDTSNVKFEKMAEPELTFDENSVDIILATMVCHHMSNEEIIAFFKQALRTTKDKVIINDLHRNPIAYWFYYLFSPILFRNRLITYDGLISIKRGFIRQELITLLEQAGMKHYQVKWCFPFRWRVIIWKK
SIO_010081: AOC03_RS12440
subclass of: SO_0000673
so part of: AOC03_RS12440
location: 35921..36613
location: region:35921-36613:1
so has part: feature:35921-36613:1:exon

WP_062536934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35921-36613:1:exon

AOC03_RS12445
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12445
old locus tag: AOC03_12425
so part of: sequence
location: 36601..37659
location: region:36601-37659:1
so has part: feature:36601-37659:1:exon
subclass of: SO_0000010

position:36601:1
position: 36601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37659:1
position: 37659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36601-37659:1:exon

AOC03_RS12445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12445
old locus tag: AOC03_12425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011768681.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MEEVVIIGGGVAGLACLNALLDQGIAALLIEGSTIGTPKMCGEFLAPIAAQQLQLWDIDPFIPIPHATFYAGSKQLDIHFTKPSAGISRSDVELKLAVRARRLGGRIRENTYLEYTTPATERTPFYFKLSTGEIIEAKSAFFAIGKLGNNTDNKKITLPYFGFKLHFSHTENDHSLKMFSLDKAYLGIVPISETVSNCSCLAKREVVDAATSPNEYFQHLTQSHPVLKKLFTPLDLSAIDIMSGRAPAFTQKNPPNWPNSYWIGDAIASLYPAIGSGFAHSVDSAIQAVQFYLKQQPELYRINYSKSIKTKVLLGNVLNAALLQPKVGQSALPLLKRSPKLVNFVLKKLDYV
SIO_010081: AOC03_RS12445
subclass of: SO_0000673
so part of: AOC03_RS12445
location: 36601..37659
location: region:36601-37659:1
so has part: feature:36601-37659:1:exon

WP_227514349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36601-37659:1:exon

AOC03_RS12450
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12450
old locus tag: AOC03_12430
so part of: sequence
location: complement(37656..38744)
location: region:37656-38744:-1
so has part: feature:37656-38744:-1:exon
subclass of: SO_0000010

position:37656:-1
position: 37656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38744:-1
position: 38744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37656-38744:-1:exon

AOC03_RS12450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12450
old locus tag: AOC03_12430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011279720.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III polyketide synthase
translation: MKSSITAIGTAVPQHKFKQSEAAELIAERLHLIPAKKRLLRFIYNATGIESRHSVLSDMGHLSNSKSDISSPDLTTAGRMALYKEHALPLAVSAIKQCMEQSDATFADITHVITVSCTGMYAPGLDIEIVQQLKLHTGAKRTAINFMGCYGAFNALKVADDACRANKDAVVLVVSVELCSLHFQNDDDLDHLVSNAIFADGAAAALIQPMAENRKSLSIEAFKCDLLPQTSEDMAWHIGDSGFDIVLKSYVPEAIESGIAEFMEKLLRQEAITDVNHYAIHPGGMKILQACETALNITKDKNKHAYHVMREYGNMSSATILFVLKELMANLTVKNHQETVFSCAFGPGLTLESMLLKINQPN
SIO_010081: AOC03_RS12450
subclass of: SO_0000673
so part of: AOC03_RS12450
location: complement(37656..38744)
location: region:37656-38744:-1
so has part: feature:37656-38744:-1:exon

WP_062536938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37656-38744:-1:exon

AOC03_RS13000
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS13000
so part of: sequence
location: complement(39004..39129)
location: region:39004-39129:-1
so has part: feature:39004-39129:-1:exon
subclass of: SO_0000010

position:39004:-1
position: 39004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39129:-1
position: 39129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39004-39129:-1:exon

AOC03_RS13000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS13000
inference: COORDINATES: protein motif:HMM:NF019843.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRQDYSKAIGWYQNLANQNNSLAKYNLGLMYEYGKGVIQKA
SIO_010081: AOC03_RS13000
subclass of: SO_0000673
so part of: AOC03_RS13000
location: complement(39004..39129)
location: region:39004-39129:-1
so has part: feature:39004-39129:-1:exon

WP_227514350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39004-39129:-1:exon

AOC03_RS12455
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12455
old locus tag: AOC03_12435
so part of: sequence
location: 39838..40158
location: region:39838-40158:1
so has part: feature:39838-40158:1:exon
subclass of: SO_0000010

position:39838:1
position: 39838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40158:1
position: 40158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39838-40158:1:exon

AOC03_RS12455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12455
old locus tag: AOC03_12435
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANNKNSKRVVYPGPVKVLPTICTKGGSASVIIKSVDVGDGYHADMLLNGKVVSAYCDVGDCALLYKYGITNVKAKVKLGYTYMEEYESTKTCTITDIELTPDQKM
SIO_010081: AOC03_RS12455
subclass of: SO_0000673
so part of: AOC03_RS12455
location: 39838..40158
location: region:39838-40158:1
so has part: feature:39838-40158:1:exon

WP_062536940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39838-40158:1:exon

AOC03_RS12460
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12460
old locus tag: AOC03_12440
so part of: sequence
location: 40453..41469
location: region:40453-41469:1
so has part: feature:40453-41469:1:exon
subclass of: SO_0000010

position:40453:1
position: 40453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41469:1
position: 41469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40453-41469:1:exon

AOC03_RS12460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12460
old locus tag: AOC03_12440
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTVKLLPIVLALGVTLSACQTKKIDCSNKEGLSAVIAALTKDAEQEIKSTNPTVTLSAIRAAINNLAFSIKEVRTSKQDPNSTKVFCEAAFVVNVPVNVIEDAEEAMKKAGYDSNVELALEENGFEISSAAANSYQATISYNLQPTDDGKSTLSRIDEGKTQVVNAIHDLIVWSMAKNELAKQSDKITQDVIVIPEVKPEVKIETAPAEIEPVQTIDTAQTFNNEPVFEEFFQANTGENYFNCAYKGKTASKKCLVTITEVNASIDSRIRERYEPHYTFPKMVIKWPDGDVSRYVSLSDNSNDEILNLANRNAYQVRDNNPIDLFIDSQGEEHVHLW
SIO_010081: AOC03_RS12460
subclass of: SO_0000673
so part of: AOC03_RS12460
location: 40453..41469
location: region:40453-41469:1
so has part: feature:40453-41469:1:exon

WP_062536942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40453-41469:1:exon

AOC03_RS12470
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12470
old locus tag: AOC03_12450
so part of: sequence
location: 41901..42491
location: region:41901-42491:1
so has part: feature:41901-42491:1:exon
subclass of: SO_0000010

position:41901:1
position: 41901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42491:1
position: 42491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41901-42491:1:exon

AOC03_RS12470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12470
old locus tag: AOC03_12450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020444571.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTVRIYVRASTKDQDATRALADLVTFSTRYGETYVDYVEHFSGTKLERPALTQLLNDAEQDDILLVESVDRLSRLSQDDFAILKQRIKDKGLRLVVADLPTTHTVSEGMTGDILKVINNMLIDLLATMAKLDNDKRRERIKQGLANSGYKPSGKKPNTAKHKRIKDLARQNNMTKDEIAKAVSVGVATVYRVLKQG
SIO_010081: AOC03_RS12470
subclass of: SO_0000673
so part of: AOC03_RS12470
location: 41901..42491
location: region:41901-42491:1
so has part: feature:41901-42491:1:exon

WP_062536946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41901-42491:1:exon

AOC03_RS12475
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12475
old locus tag: AOC03_12455
so part of: sequence
location: 42636..42986
location: region:42636-42986:1
so has part: feature:42636-42986:1:exon
subclass of: SO_0000010

position:42636:1
position: 42636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42986:1
position: 42986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42636-42986:1:exon

AOC03_RS12475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12475
old locus tag: AOC03_12455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010197623.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 transposase-related protein
translation: MTYSLDFRRQVLKSIDDGMTYVQAAEFYNLSPTTIQNWKRRVHSKATRQTKPYKIPDDVLLNDVKEHPDDYQYERARRLNCSKTGIYHALKSLGISQKKDLRTSKSLSDQKNSVSQ
SIO_010081: AOC03_RS12475
subclass of: SO_0000673
so part of: AOC03_RS12475
location: 42636..42986
location: region:42636-42986:1
so has part: feature:42636-42986:1:exon

WP_062536948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42636-42986:1:exon

AOC03_RS12895
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12895
so part of: sequence
location: complement(43567..43740)
location: region:43567-43740:-1
so has part: feature:43567-43740:-1:exon
subclass of: SO_0000010

position:43567:-1
position: 43567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43740:-1
position: 43740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43567-43740:-1:exon

AOC03_RS12895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12895
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPNTLQSIVAGRAVEKAFSNQPMAYWQTLFEEIDACVTPVLNLIEAQKPLLFAHLND
SIO_010081: AOC03_RS12895
subclass of: SO_0000673
so part of: AOC03_RS12895
location: complement(43567..43740)
location: region:43567-43740:-1
so has part: feature:43567-43740:-1:exon

WP_227514352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43567-43740:-1:exon

AOC03_RS12900
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12900
so part of: sequence
location: complement(43818..44294)
location: region:43818-44294:-1
so has part: feature:43818-44294:-1:exon
subclass of: SO_0000010

position:43818:-1
position: 43818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44294:-1
position: 44294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43818-44294:-1:exon

AOC03_RS12900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12900
inference: COORDINATES: protein motif:HMM:NF014564.2
GO function: GO:0008410 - CoA-transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CoA transferase
translation: MGLDVTTLNTINLKLLMVSITNFGTSDAFKVLARPWIEKAGSDINFMAMSGALAQLKTTSGEQAQPNVLFADLLVSSDIAFSILAAVFAAKNIGKGRHISISMTHNLYNHMIMSKNSDKTIKDIDDQYLMSLSISPLSHYPVTESIGLKMTAIWLLVP
SIO_010081: AOC03_RS12900
subclass of: SO_0000673
so part of: AOC03_RS12900
location: complement(43818..44294)
location: region:43818-44294:-1
so has part: feature:43818-44294:-1:exon

WP_227514353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43818-44294:-1:exon

AOC03_RS12905
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12905
so part of: sequence
location: complement(44370..44624)
location: region:44370-44624:-1
so has part: feature:44370-44624:-1:exon
subclass of: SO_0000010

position:44370:-1
position: 44370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44624:-1
position: 44624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44370-44624:-1:exon

AOC03_RS12905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12905
inference: COORDINATES: protein motif:HMM:NF014564.2
GO function: GO:0008410 - CoA-transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CoA transferase
translation: MSSNTKLSNNDTVATIKGSLKGLKVVNLTRNLTGSFAARLSTELGAEVVKIELENADATYTFGELFHISNHGIYSEKVNFSTVA
SIO_010081: AOC03_RS12905
subclass of: SO_0000673
so part of: AOC03_RS12905
location: complement(44370..44624)
location: region:44370-44624:-1
so has part: feature:44370-44624:-1:exon

WP_227514354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44370-44624:-1:exon

AOC03_RS12490
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12490
old locus tag: AOC03_12470
pseudo: true
so part of: sequence
location: complement(45576..>47675)
location: region:45576-47675:-1
so has part: feature:45576-47675:-1:exon
subclass of: SO_0000010

position:45576:-1
position: 45576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47675:-1
position: 47675
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45576-47675:-1:exon

AOC03_RS12490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12490
old locus tag: AOC03_12470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011280158.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF3387 domain-containing protein
SIO_010081: AOC03_RS12490
subclass of: SO_0000673
so part of: AOC03_RS12490
location: complement(45576..>47675)
location: region:45576-47675:-1
so has part: feature:45576-47675:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45576-47675:-1:exon

AOC03_RS12500
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12500
old locus tag: AOC03_12480
pseudo: true
so part of: sequence
location: 47725..48966
location: region:47725-48966:1
so has part: feature:47725-48966:1:exon
subclass of: SO_0000010

position:47725:1
position: 47725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48966:1
position: 48966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47725-48966:1:exon

AOC03_RS12500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12500
old locus tag: AOC03_12480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: AOC03_RS12500
subclass of: SO_0000673
so part of: AOC03_RS12500
location: 47725..48966
location: region:47725-48966:1
so has part: feature:47725-48966:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47725-48966:1:exon

AOC03_RS12500
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 45610
locus tag: AOC03_RS12500
old locus tag: AOC03_12480
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01497
inference: COORDINATES: profile:INFERNAL:1.1.1
note: AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: AOC03_RS12500
subclass of: SO_0000673
so part of: AOC03_RS12500
location: 48022..48138
location: region:48022-48138:1
so has part: feature:48022-48138:1:exon

position:48022:1
position: 48022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48138:1
position: 48138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48022-48138:1:exon