Psychrobacter urativorans strain R310.10B plasmid 4, complete sequence.
type: Entry
definition: Psychrobacter urativorans strain R310.10B plasmid 4, complete sequence.
sequence version: NZ_CP012710.1
sequence date: 2023-02-05
sequence: sequence
division: CON
label: NZ_CP012710.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN04076494
keyword: RefSeq
source: Psychrobacter urativorans
organism: Psychrobacter urativorans
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales; Moraxellaceae; Psychrobacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP012710.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/05/2023 19:09:38\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,519\nCDSs (total) :: 2,445\nGenes (coding) :: 2,418\nCDSs (with protein) :: 2,418\nGenes (RNA) :: 74\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 52\nncRNAs :: 4\nPseudo Genes (total) :: 27\nCDSs (without protein) :: 27\nPseudo Genes (ambiguous residues) :: 0 of 27\nPseudo Genes (frameshifted) :: 10 of 27\nPseudo Genes (incomplete) :: 16 of 27\nPseudo Genes (internal stop) :: 10 of 27\nPseudo Genes (multiple problems) :: 7 of 27\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 16222
topology: circular
so has quality: SO_0000988
location: 1..16222
location: region:1-16222:1
RO_0002162: 45610

NZ_CP012710
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN04076494
type: BioSample
SIO_000068: biosample

1
title: Complete genome of Psychrobacter urativorans R10.10B
author: See-Too, W.S.
author: Chan, K.G.
journal: Unpublished

2
title: Direct Submission
author: See-Too, W.S.
author: Chan, K.G.
journal: Submitted (21-SEP-2015) University of Malaya, Level 1, Microbiome Lab, HIR Building, Kuala Lumpur 50603, Malaysia

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16222:1
position: 16222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16222:1:source
so part of: sequence
organism: Psychrobacter urativorans
mol type: genomic DNA
strain: R310.10B
isolation source: soil
plasmid: 4
country: Antarctica
collection date: 2010-12-15
collected by: Wah Seng See-Too

45610
type: Taxonomy
SIO_000068: taxonomy

AOC03_RS12230
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12230
old locus tag: AOC03_12210
so part of: sequence
location: complement(17..2686)
location: region:17-2686:-1
so has part: feature:17-2686:-1:exon
subclass of: SO_0000010

position:17:-1
position: 17
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2686:-1
position: 2686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17-2686:-1:exon

AOC03_RS12230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12230
old locus tag: AOC03_12210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012322954.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
translation: MFELKKYQTEAIKKLSDFFKDCRDSQDIKSAFSRSISDSYFPERLYRSYQFDGVPYVCVRIPTGGGKTILGAYTVSTIAKDYLSQDYPITLWLVPTTTIQQQTVAALKSNSDYTDHLNKAFNNHVSIYDIDDVNQIRSQDIGNKAIIVVSTLANLRVTKTTDRKVYQYHENFEPHFAKLSQNHPVFEQLERVTEGDLSENGLNARDLGKIKYSFANLLALYNPLVIVDEAHNARTTLTFETLKRIHPAAIVEFTATPNTTTTNGSNIIFHVSAARLKSEDMIKLPIILTEHSNGWEDAVRDAVLTRDRLAIKAQQDTDYIRPIVLLQAENKGGKVTVETLKQCLIEQHKINESRIAIATGTQRELDGLDLFQPDCPIEFIITMEALKEGWDCSFAYVFCSVKKVSSSKDAEQLLGRVLRMPYAKRRVIEDLNRAYAHIATESLAQAAKQLTDNLISMGFEEMEAASFIRQQDANQAELFGESDNAVTPQPTSINLMLEIKDTVDTTVLTEQDRSSIRISDVNGRQVVTITGKISENLKKEIAKVSVEPTQSIERSVSIHNQSVHAALSPSENGAKFAVIPRLCVMSQGMLELAEKEVFLDAFEWNLLDYPAKIDYKPTEQTKSFIVDLPDKKVKYRELSKDQTFNLNLANTDITQEDLIRWLDQECRQSDVTQSIMIGFLSNIINHLLQRPEITLTTLVRNKYPLSNAITALVSKYREQAAASGYQQTLFANDSKVLTTYDFSYEFKADNYPISANYYTGSFDFQRHFYPQIEDMKAWGEEFDCAQTIDSMEEVKHWVRNLVRRNEASFSLPLAHGNFYPDFIVEMMDGRILIVEYKGGDSKTNQDSAEKRLVGDLWAKHSQGKCLFLMAVKQDDFGQNVKQQILNIIS
SIO_010081: AOC03_RS12230
subclass of: SO_0000673
so part of: AOC03_RS12230
location: complement(17..2686)
location: region:17-2686:-1
so has part: feature:17-2686:-1:exon

WP_062536884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17-2686:-1:exon

AOC03_RS12235
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12235
old locus tag: AOC03_12215
so part of: sequence
location: complement(2689..4236)
location: region:2689-4236:-1
so has part: feature:2689-4236:-1:exon
subclass of: SO_0000010

position:2689:-1
position: 2689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4236:-1
position: 4236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2689-4236:-1:exon

AOC03_RS12235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12235
old locus tag: AOC03_12215
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012322955.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific DNA-methyltransferase
translation: MPILNWLNKEEAVTTARDCPYRLLEQVPALSYGETYTDNMLIQGDNLEALKALIPTHAGRVKCIFIDPPYNTKSAFEHYDDNLEHSKWLSMMYPRLELLHKLLAEDGSIWITLNDNEAHYFKVMMDEIFGRSNFVANFIWQKKFSPQNDAKYVSDMHDHMFCYAKHKSDFKIKKWVDINKKDRAKNLDNDSRGDWNSVDYTCNKNKVERPNLYYGIIQPNTGETIYPKETAVWRYSQETHNSNVENDLVYWGKTGKNKVPRFKKFKSEEKQEDEGSVPISILFHTEVGNTQEAKKECILFNARDPFSTPKPERLLQRVIHLSSNEGDIVLDSFLGSATTAAVAQKMNRKFIGVELGEQAVTHCQPRLRQVVDGEKGGVSKAVDWKGGGGFEFYRLGEIIFNETGSLNKDISFHSLAAHIWYGETKTSLKQQVKSPLLGVYNDVAYYLLYNGILGDKRPDGGNVLTSKVLAMLPKHPLEPKNGKKVIYGETSRMGTARLKSENIIFKQIPYDVKGK
SIO_010081: AOC03_RS12235
subclass of: SO_0000673
so part of: AOC03_RS12235
location: complement(2689..4236)
location: region:2689-4236:-1
so has part: feature:2689-4236:-1:exon

WP_062536890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2689-4236:-1:exon

AOC03_RS12600
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12600
so part of: sequence
location: complement(4400..5500)
location: region:4400-5500:-1
so has part: feature:4400-5500:-1:exon
subclass of: SO_0000010

position:4400:-1
position: 4400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5500:-1
position: 5500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4400-5500:-1:exon

AOC03_RS12600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004971337.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RepB family plasmid replication initiator protein
translation: MGYEQSDEKALVTLNNDMIRASYKLSVNEIRLILIAIAQMPKGEKDKESAPLDPMKPYYITKADFIRLGVEPNNVAREIRSACSDLLDRKIFIDTPIGVLGTHWVHNILHFKTDVFEELKKKYPNSKYDDDFIRQLRKHNLLDSLPMIAKSDDNIMARIIFHADIIPYISELRQHFTQLKLDEMAGFSSFYSFRVYIMMMQWRDTGLVVSTLAAFREMLDLTDKYEAVKDLRKRVLDVAIDEINEKSLYTASYDLTDKNGKSGRGFKLTHLKIKFKPKAKIIKNKAKDKTERDANTADMFTVEGLNDNQLGRIARNPQFITDYNHMVSPTSPAGQSQQGWEFEMINRLKKDASQFKKRPVRDYLDY
SIO_010081: AOC03_RS12600
subclass of: SO_0000673
so part of: AOC03_RS12600
location: complement(4400..5500)
location: region:4400-5500:-1
so has part: feature:4400-5500:-1:exon

WP_084785923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4400-5500:-1:exon

AOC03_RS12250
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12250
old locus tag: AOC03_12230
so part of: sequence
location: complement(5977..6381)
location: region:5977-6381:-1
so has part: feature:5977-6381:-1:exon
subclass of: SO_0000010

position:5977:-1
position: 5977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6381:-1
position: 6381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5977-6381:-1:exon

AOC03_RS12250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12250
old locus tag: AOC03_12230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASINEDYLDDLVKRFKGFKSPNDTQKLIILLGEKDNRSSDDNRKLSVLLNAEKKADQLVKARGDARRLIDAEKSKARKTQSRCKIILQSAFEKMAAENHESKRALSELTRKALDENYVSDRDKDIIIEYINSK
SIO_010081: AOC03_RS12250
subclass of: SO_0000673
so part of: AOC03_RS12250
location: complement(5977..6381)
location: region:5977-6381:-1
so has part: feature:5977-6381:-1:exon

WP_062536886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5977-6381:-1:exon

AOC03_RS12255
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12255
old locus tag: AOC03_12235
so part of: sequence
location: 6635..8023
location: region:6635-8023:1
so has part: feature:6635-8023:1:exon
subclass of: SO_0000010

position:6635:1
position: 6635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8023:1
position: 8023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6635-8023:1:exon

AOC03_RS12255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12255
old locus tag: AOC03_12235
inference: COORDINATES: protein motif:HMM:NF015354.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobA/MobL family protein
translation: MSVGIGKKGKASPHAKYIAREGKYAKLMKDKEDLNYKGKEELEYRGHGNMPKWAEHNPNYFWQMADEHERKNGSTYREHVITLPRELYVNERHELIEDWIAQEIGGKHAYQYAIHNPPALDGDEQPHAHIMFSERTIDGIERDPDQYFKRYNSKNPEKGGAKKANTPKMSAERKEELKAMRDRWEKICNAHLERGFHSERISMKSLKEQGIQREPLNLTMAQLKQPEIKEAYRELLAAKNDDFMAELDVWMEFYDDNLEDEIKNQLAQKHEAERQAQAQQEAKKEAELEAQALQQEKQEVARRLKLEAQQQQDLKDEKSRAKAQAAEAEQARPKTAKEYVERLSKEQRQKVKDIASNTISQYSADISSKAVELYEKATPPNQRAKPLFAHYAYSDMNEVQPYKSLAQREIHKKDPSRYKDYANAVEITNAIQDMERSEGYQRQAERTREQNQDKSKNQGIER
SIO_010081: AOC03_RS12255
subclass of: SO_0000673
so part of: AOC03_RS12255
location: 6635..8023
location: region:6635-8023:1
so has part: feature:6635-8023:1:exon

WP_227514348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6635-8023:1:exon

AOC03_RS12260
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12260
old locus tag: AOC03_12240
so part of: sequence
location: complement(8126..10795)
location: region:8126-10795:-1
so has part: feature:8126-10795:-1:exon
subclass of: SO_0000010

position:8126:-1
position: 8126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10795:-1
position: 10795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8126-10795:-1:exon

AOC03_RS12260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12260
old locus tag: AOC03_12240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012322954.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
translation: MFELKKYQTEAIKKLSDFFKDCRDSQDIKSAFSRSISDSYFPERLYRSYQFDGVPYVCVRIPTGGGKTILGAYTVSTIAKDYLSQDYPITLWLVPTTTIQQQTVAALKSNSDYTDHLNKAFNNHVSIYDIDDVNQIRSQDIGNKAIIVVSTLANLRVTKTTDRKVYQYHENFEPHFAKLSQNHPVFEQLERVTEGDLSENGLNARDLGKIKYSFANLLALYNPLVIVDEAHNARTTLTFETLKRIHPAAIVEFTATPNTTTTNGSNIIFHVSAARLKSEDMIKLPIILTEHSNGWEDAVRDAVLTRDRLAIKAQQDTDYIRPIVLLQAENKGGKVTVETLKQCLIEQHKINESRIAIATGTQRELDGLDLFQPDCPIEFIITMEALKEGWDCSFAYVFCSVKKVSSSKDAEQLLGRVLRMPYAKRRVIEDLNRAYAHIATESLAQAAKQLTDNLISMGFEEMEAASFIRQQDANQAELFGESDNAVTPQPTSINLMLEIKDTVDTTVLTEQDRSSIRISDVNGRQVVTITGKISENLKKEIAKVSVEPTQSIERSVSIHNQSVHAALSPSENGAKFAVIPRLCVMSQGMLELAEKEVFLDAFEWNLLDYPAKIDYKPTEQTKSFIVDLPDKKVKYRELSKDQTFNLNLANTDITQEDLIRWLDQECRQSDVTQSIMIGFLSNIINHLLQRPEITLTTLVRNKYPLSNAITALVSKYREQAAASGYQQTLFANDSKVLTTYDFSYEFKADNYPISANYYTGSFDFQRHFYPQIEDMKAWGEEFDCAQTIDSMEEVKHWVRNLVRRNEASFSLPLAHGNFYPDFIVEMMDGRILIVEYKGGDSKTNQDSAEKRLVGDLWAKHSQGKCLFLMAVKQDDFGQNVKQQILNIIS
SIO_010081: AOC03_RS12260
subclass of: SO_0000673
so part of: AOC03_RS12260
location: complement(8126..10795)
location: region:8126-10795:-1
so has part: feature:8126-10795:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8126-10795:-1:exon

AOC03_RS12265
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12265
old locus tag: AOC03_12245
so part of: sequence
location: complement(10798..12345)
location: region:10798-12345:-1
so has part: feature:10798-12345:-1:exon
subclass of: SO_0000010

position:10798:-1
position: 10798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12345:-1
position: 12345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10798-12345:-1:exon

AOC03_RS12265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12265
old locus tag: AOC03_12245
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012322955.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific DNA-methyltransferase
translation: MPILNWLNKEEAVTTARDCPYRLLEQVPALSYGETYTDNMLIQGDNLEALKALIPTHAGRVKCIFIDPPYNTKSAFEHYDDNLEHSKWLSMMYPRLELLHKLLAEDGSIWITLNDNEAHYFKVMMDEIFGRSNFVANFIWQKKFSPQNDAKYVSDMHDHMFCYAKHKSDFKIKKWVDINKKDRAKNLDNDSRGDWNSVDYTCNKNKVERPNLYYGIIQPNTGETIYPKETAVWRYSQETHNSNVENDLVYWGKTGKNKVPRFKKFKSEEKQEDEGSVPISILFHTEVGNTQEAKKECILFNARDPFSTPKPERLLQRVIHLSSNEGDIVLDSFLGSATTAAVAQKMNRKFIGVELGEQAVTHCQPRLRQVVDGEKGGVSKAVDWKGGGGFEFYRLGEIIFNETGSLNKDISFHSLAAHIWYGETKTSLKQQVKSPLLGVYNDVAYYLLYNGILGDKRPDGGNVLTSKVLAMLPKHPLEPKNGKKVIYGETSRMGTARLKSENIIFKQIPYDVKGK
SIO_010081: AOC03_RS12265
subclass of: SO_0000673
so part of: AOC03_RS12265
location: complement(10798..12345)
location: region:10798-12345:-1
so has part: feature:10798-12345:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10798-12345:-1:exon

AOC03_RS12605
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12605
so part of: sequence
location: complement(12509..13609)
location: region:12509-13609:-1
so has part: feature:12509-13609:-1:exon
subclass of: SO_0000010

position:12509:-1
position: 12509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13609:-1
position: 13609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12509-13609:-1:exon

AOC03_RS12605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004971337.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RepB family plasmid replication initiator protein
translation: MGYEQSDEKALVTLNNDMIRASYKLSVNEIRLILIAIAQMPKGEKDKESAPLDPMKPYYITKADFIRLGVEPNNVAREIRSACSDLLDRKIFIDTPIGVLGTHWVHNILHFKTDVFEELKKKYPNSKYDDDFIRQLRKHNLLDSLPMIAKSDDNIMARIIFHADIIPYISELRQHFTQLKLDEMAGFSSFYSFRVYIMMMQWRDTGLVVSTLAAFREMLDLTDKYEAVKDLRKRVLDVAIDEINEKSLYTASYDLTDKNGKSGRGFKLTHLKIKFKPKAKIIKNKAKDKTERDANTADMFTVEGLNDNQLGRIARNPQFITDYNHMVSPTSPAGQSQQGWEFEMINRLKKDASQFKKRPVRDYLDY
SIO_010081: AOC03_RS12605
subclass of: SO_0000673
so part of: AOC03_RS12605
location: complement(12509..13609)
location: region:12509-13609:-1
so has part: feature:12509-13609:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12509-13609:-1:exon

AOC03_RS12280
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12280
old locus tag: AOC03_12260
so part of: sequence
location: complement(14088..14282)
location: region:14088-14282:-1
so has part: feature:14088-14282:-1:exon
subclass of: SO_0000010

position:14088:-1
position: 14088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14282:-1
position: 14282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14088-14282:-1:exon

AOC03_RS12280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12280
old locus tag: AOC03_12260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKNQRLVKLNQDVRLFYKVLLKKMAAENHESKRALSELTRKALDENYVSDRDKDIIIEYINSK
SIO_010081: AOC03_RS12280
subclass of: SO_0000673
so part of: AOC03_RS12280
location: complement(14088..14282)
location: region:14088-14282:-1
so has part: feature:14088-14282:-1:exon

WP_062536888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14088-14282:-1:exon

AOC03_RS12285
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12285
old locus tag: AOC03_12265
so part of: sequence
location: 14748..16136
location: region:14748-16136:1
so has part: feature:14748-16136:1:exon
subclass of: SO_0000010

position:14748:1
position: 14748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16136:1
position: 16136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14748-16136:1:exon

AOC03_RS12285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12285
old locus tag: AOC03_12265
inference: COORDINATES: protein motif:HMM:NF015354.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobA/MobL family protein
translation: MSVGIGKKGKASPHAKYIAREGKYAKLMKDKEDLNYKGKEELEYRGHGNMPKWAEHNPNYFWQMADEHERKNGSTYREHVITLPRELYVNERHELIEDWIAQEIGGKHAYQYAIHNPPALDGDEQPHAHIMFSERTIDGIERDPDQYFKRYNSKNPEKGGAKKANTPKMSAERKEELKAMRDRWEKICNAHLERGFHSERISMKSLKEQGIQREPLNLTMAQLKQPEIKEAYRELLAAKNDDFMAELDVWMEFYDDNLEDEIKNQLAQKHEAERQAQAQQEAKKEAELEAQALQQEKQEVARRLKLEAQQQQDLKDEKSRAKAQAAEAEQARPKTAKEYVERLSKEQRQKVKDIASNTISQYSADISSKAVELYEKATPPNQRAKPLFAHYAYSDMNEVQPYKSLAQREIHKKDPSRYKDYANAVEITNAIQDMERSEGYQRQAERTREQNQDKSKNQGIER
SIO_010081: AOC03_RS12285
subclass of: SO_0000673
so part of: AOC03_RS12285
location: 14748..16136
location: region:14748-16136:1
so has part: feature:14748-16136:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14748-16136:1:exon