Psychrobacter urativorans strain R310.10B plasmid 3, complete sequence.
Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales; Moraxellaceae; Psychrobacter.
Complete genome of Psychrobacter urativorans R10.10B
Submitted (21-SEP-2015) University of Malaya, Level 1, Microbiome Lab, HIR Building, Kuala Lumpur 50603, Malaysia
REFSEQ INFORMATION: The reference sequence is identical to\nCP012709.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/05/2023 19:09:38\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,519\nCDSs (total) :: 2,445\nGenes (coding) :: 2,418\nCDSs (with protein) :: 2,418\nGenes (RNA) :: 74\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 52\nncRNAs :: 4\nPseudo Genes (total) :: 27\nCDSs (without protein) :: 27\nPseudo Genes (ambiguous residues) :: 0 of 27\nPseudo Genes (frameshifted) :: 10 of 27\nPseudo Genes (incomplete) :: 16 of 27\nPseudo Genes (internal stop) :: 10 of 27\nPseudo Genes (multiple problems) :: 7 of 27\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_004810939.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010197378.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020443515.1
COORDINATES: protein motif:HMM:NF038291.1
COORDINATES: protein motif:HMM:NF015354.2
COORDINATES: similar to AA sequence:RefSeq:WP_020444565.1
COORDINATES: protein motif:HMM:TIGR02384.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
type II toxin-antitoxin system RelB/DinJ family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_011954793.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_001140617.1
COORDINATES: similar to AA sequence:RefSeq:WP_015848528.1
COORDINATES: similar to AA sequence:RefSeq:WP_008046935.1
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015817789.1
COORDINATES: similar to AA sequence:RefSeq:WP_011356527.1
COORDINATES: protein motif:HMM:NF014573.2
COORDINATES: similar to AA sequence:RefSeq:WP_019519776.1
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011279464.1
COORDINATES: protein motif:HMM:NF021616.2
COORDINATES: protein motif:HMM:NF024831.2