Psychrobacter urativorans strain R310.10B plasmid 2, complete sequence.
type: Entry
definition: Psychrobacter urativorans strain R310.10B plasmid 2, complete sequence.
sequence version: NZ_CP012708.1
sequence date: 2023-02-05
sequence: sequence
division: CON
label: NZ_CP012708.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN04076494
keyword: RefSeq
source: Psychrobacter urativorans
organism: Psychrobacter urativorans
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales; Moraxellaceae; Psychrobacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP012708.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/05/2023 19:09:38\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,519\nCDSs (total) :: 2,445\nGenes (coding) :: 2,418\nCDSs (with protein) :: 2,418\nGenes (RNA) :: 74\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 52\nncRNAs :: 4\nPseudo Genes (total) :: 27\nCDSs (without protein) :: 27\nPseudo Genes (ambiguous residues) :: 0 of 27\nPseudo Genes (frameshifted) :: 10 of 27\nPseudo Genes (incomplete) :: 16 of 27\nPseudo Genes (internal stop) :: 10 of 27\nPseudo Genes (multiple problems) :: 7 of 27\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 15605
topology: circular
so has quality: SO_0000988
location: 1..15605
location: region:1-15605:1
RO_0002162: 45610

NZ_CP012708
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN04076494
type: BioSample
SIO_000068: biosample

1
title: Complete genome of Psychrobacter urativorans R10.10B
author: See-Too, W.S.
author: Chan, K.G.
journal: Unpublished

2
title: Direct Submission
author: See-Too, W.S.
author: Chan, K.G.
journal: Submitted (21-SEP-2015) University of Malaya, Level 1, Microbiome Lab, HIR Building, Kuala Lumpur 50603, Malaysia

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15605:1
position: 15605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-15605:1:source
so part of: sequence
organism: Psychrobacter urativorans
mol type: genomic DNA
strain: R310.10B
isolation source: soil
plasmid: 2
country: Antarctica
collection date: 2010-12-15
collected by: Wah Seng See-Too

45610
type: Taxonomy
SIO_000068: taxonomy

AOC03_RS12880
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12880
so part of: sequence
location: join(14803..15605,1..478)
location: region:1-15605:1
so has part: feature:14803-15605:1:exon
so has part: feature:1-478:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:14803-15605:1:exon

position:14803:1
position: 14803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-478:1:exon

position:478:1
position: 478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AOC03_RS12880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015473 - fimbrial usher porin activity [Evidence IEA]
GO process: GO:0009297 - pilus assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: fimbria/pilus outer membrane usher protein
translation: MELRRLQTSRWALPLAKFVILQCLAVSASHAVELNDIASTDIADDGLSQLNLDSYNPDDDSSFDLYLDVILNGASAGLVHFYFRDEKLLASATILKQLGFIVPPNSTEPIALNSLPDLKIYYDVRRQTLKLIAPLSMLNLDATVLNTRTNKRPQPSASPGMLLNYNLYGTQTQNSAKSLSAYSELRVFNNLGVLSSTSLTTANRPADSDKNSSDWNSRTVRLDTSWSKSFPDKLITVRAGDILTGALSWTRSTRLGGLQIGTNFDLQPYRSTTPLPTFFGSATLPSAVELYVNGLKQYSGNVPAGPFELNTAPSFSGAGTAQLVVTDALGQSTTLNFSLYDAHRLLQPGLADWSLEIGAVRENYGNESFGYGRNIAASGTWRYGLSNRFSAETHAEVTNGLSNVGVGGTWLLGSGWWYFICLISWQ
SIO_010081: AOC03_RS12880
subclass of: SO_0000673
so part of: AOC03_RS12880
location: join(14803..15605,1..478)
location: region:1-15605:1
so has part: feature:14803-15605:1:exon
so has part: feature:1-478:1:exon

WP_227514345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14803-15605:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-478:1:exon

AOC03_RS12885
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12885
so part of: sequence
location: 411..1649
location: region:411-1649:1
so has part: feature:411-1649:1:exon
subclass of: SO_0000010

position:411:1
position: 411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1649:1
position: 1649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411-1649:1:exon

AOC03_RS12885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12885
inference: COORDINATES: protein motif:HMM:NF012786.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015473 - fimbrial usher porin activity [Evidence IEA]
GO process: GO:0009297 - pilus assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fimbria/pilus outer membrane usher protein
translation: MLAVRGCLVVAGGILFASLAGSKSQDQVGTQYSTSYSWNNRRFNIGASALGSSNDYRDVGSQYGSAPARRSEQISTGYSTQSLGSFGVSYNQVAQAEQKSTQFASAYWSKSFGRRLRMSANYNHDINDSANNSASLSASFSMDRNISLSSSLQHTDNSSVGAADISKSAPSAGGLGWRAQARHSLDNSENNKDSTGGLAELNYLGRYGQAQAGIRGNDGSYASFASARGALVKMGGGLFAARQINSGFAVVSTGDIANVPVLLQNTPIGTTNSRGLLLVSPLNAYQDNKIGIDTMQLPADLRIDKVSIDATPTDRAGILVAFGIKPVRSASVILVDSDNQSLPLGSQVRQLSNTDVPSTVVGFDGEVYLDTLDEHNTLEVTTPSDDICTVSFDYTKQGDEIPLIGPLICQKG
SIO_010081: AOC03_RS12885
subclass of: SO_0000673
so part of: AOC03_RS12885
location: 411..1649
location: region:411-1649:1
so has part: feature:411-1649:1:exon

WP_227514346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411-1649:1:exon

AOC03_RS12050
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12050
old locus tag: AOC03_12030
so part of: sequence
location: 1733..2689
location: region:1733-2689:1
so has part: feature:1733-2689:1:exon
subclass of: SO_0000010

position:1733:1
position: 1733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2689:1
position: 2689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1733-2689:1:exon

AOC03_RS12050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12050
old locus tag: AOC03_12030
inference: COORDINATES: protein motif:HMM:NF017079.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spore coat protein U domain-containing protein
translation: MWLPSNAQALTCKVDSFVSPNFEPITLANANNASVEQTLTYSCTNTSDVIEWASVCIDVDGGTNKPSQVNPRQMIGLNNSELKLNFNMTLSGMSNATWGKRDVGGTEFIDFFSVAPGITTPTIKETIIKTSLLSNTAPTADDYTATFTAGNTALTYVTVDSNIDTQQCLSESQNTAPFPFTVQAKVIPSCIINSASDIDLGSKPANLINIKGNSAINVTCTNNATYHIGLSPSNGNEDGAGVMTKNLGDSNGVPYQLRSTSGDGGMIWGNTATSEDVGNGVKGKGSGAPENHNVYVTVPSLDFEPGNYSDTVTINVNY
SIO_010081: AOC03_RS12050
subclass of: SO_0000673
so part of: AOC03_RS12050
location: 1733..2689
location: region:1733-2689:1
so has part: feature:1733-2689:1:exon

WP_162199624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1733-2689:1:exon

AOC03_RS12055
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12055
old locus tag: AOC03_12035
so part of: sequence
location: 3155..3736
location: region:3155-3736:1
so has part: feature:3155-3736:1:exon
subclass of: SO_0000010

position:3155:1
position: 3155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3736:1
position: 3736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3155-3736:1:exon

AOC03_RS12055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12055
old locus tag: AOC03_12035
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNEKRYSKRQVNMMRVNAFRAEGSVSKNLFIACICGVHELEFDGEDAKNYPVDYYVFKRIIEDMPNMEKLYDQINTYRGAQILKLLGTSVDNKKLSFLTAHKDPFSTMSAKDVMNIVKADLKNYQLLLDTFICHRQRVAVRELRAKVKKELGMDNEEIKQYKIYMTIPDSLQPLVYEYKRREQAKKAAVKPES
SIO_010081: AOC03_RS12055
subclass of: SO_0000673
so part of: AOC03_RS12055
location: 3155..3736
location: region:3155-3736:1
so has part: feature:3155-3736:1:exon

WP_062536823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3155-3736:1:exon

AOC03_RS12060
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12060
old locus tag: AOC03_12040
so part of: sequence
location: 4462..5343
location: region:4462-5343:1
so has part: feature:4462-5343:1:exon
subclass of: SO_0000010

position:4462:1
position: 4462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5343:1
position: 5343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4462-5343:1:exon

AOC03_RS12060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12060
old locus tag: AOC03_12040
inference: COORDINATES: protein motif:HMM:NF013258.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobV family relaxase
translation: MNYAILRTAKLKTMGNIGGSLAHNYRTIETPNADPNRTPKNHHSVATPEAVKKAIQDRLPEKRRADAVLCIEYLITASPEWEGWGTDKEAEFFERAGQWLSEKHGAENMAGLSIHRDISTPQLVAYVVPIDQKGKLNCKEFLGGRVKLSQMQTDFANTVTDLGLTRGKEGSTAKHTSIKAYYHDINHARDFRITTEPPKPELFESKASYGEKVISAVIEQIEPTVKAANSILMDYEKARIDKSVAEESYETLKKRVEPYLIATKGLNQEEITRINEAMQLESRKIAVDKDKIK
SIO_010081: AOC03_RS12060
subclass of: SO_0000673
so part of: AOC03_RS12060
location: 4462..5343
location: region:4462-5343:1
so has part: feature:4462-5343:1:exon

WP_084785918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4462-5343:1:exon

AOC03_RS12065
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
gene: repM
locus tag: AOC03_RS12065
old locus tag: AOC03_12045
so part of: sequence
location: 5869..6861
location: region:5869-6861:1
so has part: feature:5869-6861:1:exon
subclass of: SO_0000010

position:5869:1
position: 5869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6861:1
position: 6861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5869-6861:1:exon

AOC03_RS12065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
gene: repM
locus tag: AOC03_RS12065
old locus tag: AOC03_12045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004897090.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein RepM
translation: MNDKSLVVKENSLIQASYTLSLVEQRLLLLAIIVIREHTHKNELDYIAFDKPIEIYADAYIKQFGVHRQTAYKNLKEASKTLFARQFSYQEKRQKGMANVTSRWVSDVAYIDSEALVELTFSRAIIPLITELESSLTSYEIGQVSNLTSGYALRLYELLIAWKSKGVTPKWQLEEFRRKMGVEEGKYLRMGQFKEKVLDFAVEQINEYTDITVKYQQYKNGRKVDAFKFTIKIDSIEKTVKPNRDPNTIDWINNKTDNEVNALNPKQLARAVNSKKFMSDYAHLVMPQNPANSSSSAWITHMATWLKKDPSKFTKRPMKEYLDDEQADRF
SIO_010081: AOC03_RS12065
subclass of: SO_0000673
so part of: AOC03_RS12065
location: 5869..6861
location: region:5869-6861:1
so has part: feature:5869-6861:1:exon

WP_062536825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5869-6861:1:exon

AOC03_RS12070
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12070
old locus tag: AOC03_12050
so part of: sequence
location: 7153..7641
location: region:7153-7641:1
so has part: feature:7153-7641:1:exon
subclass of: SO_0000010

position:7153:1
position: 7153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7641:1
position: 7641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7153-7641:1:exon

AOC03_RS12070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12070
old locus tag: AOC03_12050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020442777.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: META domain-containing protein
translation: MKNMTKVIMAGVLAVGTLAAGCQTTPTVTTPVEQTVTSNILQSYNWQLVDAKGTNNTKVPQLFFDPSNPLILEFTSENGNNFVSLLNTCNNMAAGYSIVNGNVQVGNIRSTRMACPEPQASFDKAAVDTVKGKYSISKSANNSPVLTITNAYQVASFKAIAK
SIO_010081: AOC03_RS12070
subclass of: SO_0000673
so part of: AOC03_RS12070
location: 7153..7641
location: region:7153-7641:1
so has part: feature:7153-7641:1:exon

WP_062536827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7153-7641:1:exon

AOC03_RS12080
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12080
old locus tag: AOC03_12060
so part of: sequence
location: complement(9217..9699)
location: region:9217-9699:-1
so has part: feature:9217-9699:-1:exon
subclass of: SO_0000010

position:9217:-1
position: 9217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9699:-1
position: 9699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9217-9699:-1:exon

AOC03_RS12080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12080
old locus tag: AOC03_12060
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDSFHQALTIKKSVLILSAFLMLNGCQTVDNDPNKQTIEKKDNEPFFTYALPKSTLAQPLIVTPTAIVVEFKFDNGCLLAFNGTDWMTPVFPEHHVKFDIKNKELKLLGQKYRMGEMIEAGGYTTPYTSNKIKNIANTPVKECITERLVVFYGDYEAYTP
SIO_010081: AOC03_RS12080
subclass of: SO_0000673
so part of: AOC03_RS12080
location: complement(9217..9699)
location: region:9217-9699:-1
so has part: feature:9217-9699:-1:exon

WP_062536831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9217-9699:-1:exon

AOC03_RS12085
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12085
old locus tag: AOC03_12065
so part of: sequence
location: complement(9953..10189)
location: region:9953-10189:-1
so has part: feature:9953-10189:-1:exon
subclass of: SO_0000010

position:9953:-1
position: 9953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10189:-1
position: 10189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9953-10189:-1:exon

AOC03_RS12085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12085
old locus tag: AOC03_12065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010198729.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVGDKLICIDGNACYVAGEIYTVGDFINDKFFKIRTGFDNGYWYATKDDEGIYVRFNSKEDQVSDAWFDELEYQDYA
SIO_010081: AOC03_RS12085
subclass of: SO_0000673
so part of: AOC03_RS12085
location: complement(9953..10189)
location: region:9953-10189:-1
so has part: feature:9953-10189:-1:exon

WP_062536833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9953-10189:-1:exon

AOC03_RS12090
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
gene: repM
locus tag: AOC03_RS12090
old locus tag: AOC03_12070
so part of: sequence
location: 10688..11650
location: region:10688-11650:1
so has part: feature:10688-11650:1:exon
subclass of: SO_0000010

position:10688:1
position: 10688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11650:1
position: 11650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10688-11650:1:exon

AOC03_RS12090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
gene: repM
locus tag: AOC03_RS12090
old locus tag: AOC03_12070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001292331.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein RepM
translation: MSKLVAKHNKLISASYSLGVPEQRIIFLAIVAARAQDKLIDARGVLQIHASSYQEQFKVEKHSAYKALKSATRGLFDAHFEYDDIHEQTGKDAHNFIRWVQKIRYINAAGMIELQFTDDVIPLITRLSEQYTEYDLKQVSELQSEYAIRIYELMMQWKSVGKTNEITIDNLRKKLGVKPEQYKQMCNFKTRVLDHAVKQINEHTDITVKYEQHKTGKTITSISFTFKRKQVIEHNNAAQNKARDTDTPDLFHNMTDSQIATFSSKLANLPELGSNAPIGKSTAEFAAIIASELADESKQGKYRPYLEKMGYRQSKPLKTA
SIO_010081: AOC03_RS12090
subclass of: SO_0000673
so part of: AOC03_RS12090
location: 10688..11650
location: region:10688-11650:1
so has part: feature:10688-11650:1:exon

WP_062536835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10688-11650:1:exon

AOC03_RS12095
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12095
old locus tag: AOC03_12075
so part of: sequence
location: complement(11652..12785)
location: region:11652-12785:-1
so has part: feature:11652-12785:-1:exon
subclass of: SO_0000010

position:11652:-1
position: 11652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12785:-1
position: 12785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11652-12785:-1:exon

AOC03_RS12095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12095
old locus tag: AOC03_12075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020444562.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MLVKFFRHGTGSGAGPLNYLLGSDRQRADAKVLYGDPMMTEQLINATPFKQKYKSGVLSFTERADSFTDKQKMDIMQRFEQTLFAGLDPDQYDILWIEHSDKAKVAKTDEYGAVIEGSDTVGRLELNFVIPCMELRSGKSLQPFFAGADLVRVNALKNIINHEYKLTNPDDPIRKREVSPYVNNAPRPTPFDVKRKSRTEKDEVDEDAEIIKNPPSHALLKDAIDRQMLRLFKQSRLQHRLDVSYVLKDWGLTIERQTERSISVSHPNIKKNIRLKGNIYERDFNSRTAHPYSKEREQNSFDNDSRYQYRKDLKTWQTGMEKKVAYHQELYGDIKAPEPLDLGIHATLPDNESEFDKKELKMAIPKPKPKRTYYPRP
SIO_010081: AOC03_RS12095
subclass of: SO_0000673
so part of: AOC03_RS12095
location: complement(11652..12785)
location: region:11652-12785:-1
so has part: feature:11652-12785:-1:exon

WP_062536837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11652-12785:-1:exon

AOC03_RS12100
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12100
old locus tag: AOC03_12080
so part of: sequence
location: complement(12785..13111)
location: region:12785-13111:-1
so has part: feature:12785-13111:-1:exon
subclass of: SO_0000010

position:13111:-1
position: 13111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12785-13111:-1:exon

AOC03_RS12100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12100
old locus tag: AOC03_12080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016247070.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobC family plasmid mobilization relaxosome protein
translation: MTTSNNRPEKRTREITIRVTDDELKRLHERKTDATLAGWMRNLCLGATPIKQADPNMVRALGRMGSNLNQIAKHANTHNELDQNVLTEISAIREILTDLIEKNLQGDN
SIO_010081: AOC03_RS12100
subclass of: SO_0000673
so part of: AOC03_RS12100
location: complement(12785..13111)
location: region:12785-13111:-1
so has part: feature:12785-13111:-1:exon

WP_062536841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12785-13111:-1:exon

AOC03_RS12105
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12105
old locus tag: AOC03_12085
so part of: sequence
location: 13567..14088
location: region:13567-14088:1
so has part: feature:13567-14088:1:exon
subclass of: SO_0000010

position:13567:1
position: 13567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14088:1
position: 14088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13567-14088:1:exon

AOC03_RS12105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12105
old locus tag: AOC03_12085
inference: COORDINATES: protein motif:HMM:NF017079.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spore coat protein U domain-containing protein
translation: MTMTFNKTLLTATMLTLGGFAAMTGANAADALAGGFNVDLEVEATCVINTGTGDIDLGKTLAGAGASTAALGTEIILNCSKGAVYAISLVPTGANVDGTGVMLGGTGTLEEVAYKLTTDAAGLVPWGGTGNTVGGTALLYATDIKNTVYATVTGSADVSPSTYTDAVVINVSY
SIO_010081: AOC03_RS12105
subclass of: SO_0000673
so part of: AOC03_RS12105
location: 13567..14088
location: region:13567-14088:1
so has part: feature:13567-14088:1:exon

WP_162199625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13567-14088:1:exon

AOC03_RS12965
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12965
so part of: sequence
location: 14090..14404
location: region:14090-14404:1
so has part: feature:14090-14404:1:exon
subclass of: SO_0000010

position:14090:1
position: 14090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14404:1
position: 14404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14090-14404:1:exon

AOC03_RS12965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12965
inference: COORDINATES: protein motif:HMM:NF012565.2
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO process: GO:0071555 - cell wall organization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fimbria/pilus periplasmic chaperone
translation: MLNLWLRRVATPAFISALLLSSSLATAVGLQVSPISLSLQARESANGLTLSNTGDDMVQAQARVYQWSQDEKGDQLTPSRGLLASPPMIKLKAGEKTTHPYYSC
SIO_010081: AOC03_RS12965
subclass of: SO_0000673
so part of: AOC03_RS12965
location: 14090..14404
location: region:14090-14404:1
so has part: feature:14090-14404:1:exon

WP_250635708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14090-14404:1:exon

AOC03_RS12970
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12970
so part of: sequence
location: 14370..14852
location: region:14370-14852:1
so has part: feature:14370-14852:1:exon
subclass of: SO_0000010

position:14370:1
position: 14370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14852:1
position: 14852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14370-14852:1:exon

AOC03_RS12970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12970
inference: COORDINATES: protein motif:HMM:NF012565.2
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO process: GO:0071555 - cell wall organization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fimbria/pilus periplasmic chaperone
translation: MKKQLIRIIRAKAPPQGSGAVEDAYRILINEIPVKSATQKTGLQFALSYSLPVFVQPVGVDKTSPQLQWSTHLQPDGKEVKLRVSNNGNGHAQLAGLSFTDTAGTSTVINPGLLGYVLPGATMNWTLKIPPSALTTGGKFKVMLNGTQTTPNVTMGTATR
SIO_010081: AOC03_RS12970
subclass of: SO_0000673
so part of: AOC03_RS12970
location: 14370..14852
location: region:14370-14852:1
so has part: feature:14370-14852:1:exon

WP_250635709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14370-14852:1:exon