Psychrobacter urativorans strain R310.10B plasmid 1, complete sequence.
type: Entry
definition: Psychrobacter urativorans strain R310.10B plasmid 1, complete sequence.
sequence version: NZ_CP012707.1
sequence date: 2023-02-05
sequence: sequence
division: CON
label: NZ_CP012707.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN04076494
keyword: RefSeq
source: Psychrobacter urativorans
organism: Psychrobacter urativorans
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales; Moraxellaceae; Psychrobacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP012707.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/05/2023 19:09:38\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,519\nCDSs (total) :: 2,445\nGenes (coding) :: 2,418\nCDSs (with protein) :: 2,418\nGenes (RNA) :: 74\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 52\nncRNAs :: 4\nPseudo Genes (total) :: 27\nCDSs (without protein) :: 27\nPseudo Genes (ambiguous residues) :: 0 of 27\nPseudo Genes (frameshifted) :: 10 of 27\nPseudo Genes (incomplete) :: 16 of 27\nPseudo Genes (internal stop) :: 10 of 27\nPseudo Genes (multiple problems) :: 7 of 27\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 24169
topology: circular
so has quality: SO_0000988
location: 1..24169
location: region:1-24169:1
RO_0002162: 45610

NZ_CP012707
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN04076494
type: BioSample
SIO_000068: biosample

1
title: Complete genome of Psychrobacter urativorans R10.10B
author: See-Too, W.S.
author: Chan, K.G.
journal: Unpublished

2
title: Direct Submission
author: See-Too, W.S.
author: Chan, K.G.
journal: Submitted (21-SEP-2015) University of Malaya, Level 1, Microbiome Lab, HIR Building, Kuala Lumpur 50603, Malaysia

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24169:1
position: 24169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-24169:1:source
so part of: sequence
organism: Psychrobacter urativorans
mol type: genomic DNA
strain: R310.10B
isolation source: soil
plasmid: 1
country: Antarctica
collection date: 2010-12-15
collected by: Wah Seng See-Too

45610
type: Taxonomy
SIO_000068: taxonomy

AOC03_RS11925
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS11925
old locus tag: AOC03_11905
pseudo: true
so part of: sequence
location: <7..365
location: region:7-365:1
so has part: feature:7-365:1:exon
subclass of: SO_0000010

position:7:1
position: 7
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:365:1
position: 365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7-365:1:exon

AOC03_RS11925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS11925
old locus tag: AOC03_11905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015230016.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA cytosine methyltransferase
SIO_010081: AOC03_RS11925
subclass of: SO_0000673
so part of: AOC03_RS11925
location: <7..365
location: region:7-365:1
so has part: feature:7-365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7-365:1:exon

AOC03_RS11930
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS11930
old locus tag: AOC03_11910
so part of: sequence
location: complement(378..1277)
location: region:378-1277:-1
so has part: feature:378-1277:-1:exon
subclass of: SO_0000010

position:378:-1
position: 378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277:-1
position: 1277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378-1277:-1:exon

AOC03_RS11930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS11930
old locus tag: AOC03_11910
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPRYNEFESHLVQLFNASENLSWRDKSYSEIVACKPATQGSGGECKTDIYVSLRNMGQEEDSIKITVKKADAEFLVNKMTANDAESLFGCDWVSILTESMKPIEKQFRQSKLIYVKPQKNPKDLFFTLGWKLEITNKIRNLSSELKLSPNDIVDKVYRGTEQPKRRKDGLVGNLVIENSGVADYLLEGDSIDFSDAQSVLNNLIDLSNYTPPPVYLAFTANNYRLIANKADGKRTLAVAIEWSLSNGRLVPKFIFESPLKYQGETHMMPFIKSALAEIGITTQSVDTNFLEEIDVESLQ
SIO_010081: AOC03_RS11930
subclass of: SO_0000673
so part of: AOC03_RS11930
location: complement(378..1277)
location: region:378-1277:-1
so has part: feature:378-1277:-1:exon

WP_062536792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378-1277:-1:exon

AOC03_RS11935
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS11935
old locus tag: AOC03_11915
so part of: sequence
location: complement(1633..2220)
location: region:1633-2220:-1
so has part: feature:1633-2220:-1:exon
subclass of: SO_0000010

position:1633:-1
position: 1633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2220:-1
position: 2220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1633-2220:-1:exon

AOC03_RS11935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS11935
old locus tag: AOC03_11915
inference: COORDINATES: protein motif:HMM:NF021518.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2247 family protein
translation: MRYTGVELAAVTTIIQDTEKLNVKNISIPFSFLKENNIVLSEKEVDFAISRKIIDLQDLGKIVDVSLINYPDSQYLLEIALNILLNGSYLNPYVQYLEIDYSGVNREDGTIIIDDERVNDRLRYIILLWLFKNRLNSDADFDKVNSVYDDFSYPSDMIGFISYMPTKESGNKRMSNLIYSHWQIYLETYSYLLKT
SIO_010081: AOC03_RS11935
subclass of: SO_0000673
so part of: AOC03_RS11935
location: complement(1633..2220)
location: region:1633-2220:-1
so has part: feature:1633-2220:-1:exon

WP_062536794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1633-2220:-1:exon

AOC03_RS11940
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS11940
old locus tag: AOC03_11920
so part of: sequence
location: 2326..2619
location: region:2326-2619:1
so has part: feature:2326-2619:1:exon
subclass of: SO_0000010

position:2326:1
position: 2326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2619:1
position: 2619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2326-2619:1:exon

AOC03_RS11940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS11940
old locus tag: AOC03_11920
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRILDLCSHLGESLRGNGIDNFAFPMREVDSILELYKTNRVLILGGDIYIKTSCKNFAPFYANWFYEGNDIEDSIIKAKDYLRIFKGKDLYVCFVA
SIO_010081: AOC03_RS11940
subclass of: SO_0000673
so part of: AOC03_RS11940
location: 2326..2619
location: region:2326-2619:1
so has part: feature:2326-2619:1:exon

WP_157049362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2326-2619:1:exon

AOC03_RS11945
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS11945
old locus tag: AOC03_11925
so part of: sequence
location: complement(2712..3281)
location: region:2712-3281:-1
so has part: feature:2712-3281:-1:exon
subclass of: SO_0000010

position:2712:-1
position: 2712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3281:-1
position: 3281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2712-3281:-1:exon

AOC03_RS11945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS11945
old locus tag: AOC03_11925
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDRPWIEDNDPMKGFYDYLNEEEIAWLYGVVRAIDLNQATFNTNFFPNKVQLLDFSNYSDEPYQFELLSDLINKFNNVGSFLFWFPLNNDCSKNEFEKFEPLMIAKTPMNIMYLKKVSQSMMQMMNGGYVVADSGNNFIAIIVDGYYMLALVDDNNLPIKYEKYLKNWSLIEENLDSITAKSLIHARL
SIO_010081: AOC03_RS11945
subclass of: SO_0000673
so part of: AOC03_RS11945
location: complement(2712..3281)
location: region:2712-3281:-1
so has part: feature:2712-3281:-1:exon

WP_062536799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2712-3281:-1:exon

AOC03_RS11950
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS11950
old locus tag: AOC03_11930
so part of: sequence
location: 3372..3590
location: region:3372-3590:1
so has part: feature:3372-3590:1:exon
subclass of: SO_0000010

position:3372:1
position: 3372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3590:1
position: 3590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3372-3590:1:exon

AOC03_RS11950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS11950
old locus tag: AOC03_11930
inference: COORDINATES: protein motif:HMM:NF027602.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4926 domain-containing protein
translation: MLNINDVIKVSKDIQENIRSGDVGTVVHIFDVTPPVYEIEFSDDQGRTIETVPLKEEDISLYWVASTKKYSN
SIO_010081: AOC03_RS11950
subclass of: SO_0000673
so part of: AOC03_RS11950
location: 3372..3590
location: region:3372-3590:1
so has part: feature:3372-3590:1:exon

WP_062536801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3372-3590:1:exon

AOC03_RS11955
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS11955
old locus tag: AOC03_11935
so part of: sequence
location: complement(3879..4202)
location: region:3879-4202:-1
so has part: feature:3879-4202:-1:exon
subclass of: SO_0000010

position:3879:-1
position: 3879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4202:-1
position: 4202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3879-4202:-1:exon

AOC03_RS11955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS11955
old locus tag: AOC03_11935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011512364.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKILILSKAFQNKLWIMFLVSVVGLSACSSETEEPATNTESSEMKPVQKEDDAEDQMTASIEDTEGAGGTTYYSSNGNVENEQKADDTDTVNENNSNLDQTRARGVQ
SIO_010081: AOC03_RS11955
subclass of: SO_0000673
so part of: AOC03_RS11955
location: complement(3879..4202)
location: region:3879-4202:-1
so has part: feature:3879-4202:-1:exon

WP_062536803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3879-4202:-1:exon

AOC03_RS11960
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS11960
old locus tag: AOC03_11940
so part of: sequence
location: 4519..5373
location: region:4519-5373:1
so has part: feature:4519-5373:1:exon
subclass of: SO_0000010

position:4519:1
position: 4519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5373:1
position: 5373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4519-5373:1:exon

AOC03_RS11960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS11960
old locus tag: AOC03_11940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007395475.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADKSVNQNSIESALESLENTTESLSNDAVTGVEVLKGDTVVYEDGDFDDYNAVNDYETDTEDKSDTEDKSDTEDKSDTEDKSDTEDKSDTEDKSDTEDKSDAEDKSDAEDKSDTEDKSDAEDKSDTEDKSDTEDKSDTEDKSDAEDKSDTEDKSDAEDKHSLTINSIYQWATKLKDDLMSDKENNSDSDQEAKHGTTIANIYHWASKLKDDLLSETSGMTHEVSEKAVAMLLNRLLDSMNAELEAFDKKIEDSEGSVDNAEEERNKITTKKEKYQGMIDQLES
SIO_010081: AOC03_RS11960
subclass of: SO_0000673
so part of: AOC03_RS11960
location: 4519..5373
location: region:4519-5373:1
so has part: feature:4519-5373:1:exon

WP_062536805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4519-5373:1:exon

AOC03_RS11965
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS11965
old locus tag: AOC03_11945
so part of: sequence
location: complement(5950..6318)
location: region:5950-6318:-1
so has part: feature:5950-6318:-1:exon
subclass of: SO_0000010

position:5950:-1
position: 5950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6318:-1
position: 6318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5950-6318:-1:exon

AOC03_RS11965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS11965
old locus tag: AOC03_11945
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNYFYFSNYELDLINSGLLIMMTKKAKKSMELTEEKREHDYEEVSLELFELCLKIKSLSNEYTNLSSHELDLIKSGLIILADCTYRQGLEKQDEALYYESFDLQFKEVWEKIHNNESTQVH
SIO_010081: AOC03_RS11965
subclass of: SO_0000673
so part of: AOC03_RS11965
location: complement(5950..6318)
location: region:5950-6318:-1
so has part: feature:5950-6318:-1:exon

WP_062536807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5950-6318:-1:exon

AOC03_RS11970
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS11970
old locus tag: AOC03_11950
so part of: sequence
location: 6961..7896
location: region:6961-7896:1
so has part: feature:6961-7896:1:exon
subclass of: SO_0000010

position:6961:1
position: 6961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7896:1
position: 7896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6961-7896:1:exon

AOC03_RS11970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS11970
old locus tag: AOC03_11950
inference: COORDINATES: protein motif:HMM:NF024260.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MDVLSTLFQQRQHLSETKYYGVKFSGDWAYSIKSSNAIYFYLVQAGSCCISIGGATRKMYAGDVVMIANGDKHVCYALDYHGDEAKPLDRISLNCNQDIITVSEESTLNVQLILVECQYDKDPLLPLLSALPAILPEDNDSHKSQPKTFDVAVKFITLESECERLGKLAMINLWVNIVMIECLRTYIESLPETSDSWLIAMREPYLSKVLILMHDKPDYSWTTHELAKEAGMSRSSFSQRFRETVGTPPLTYLTDYRLRLAASHLRLRQNNIGQISEMVGYASNSTFSQAFKRVYGMSPKAYQQQKVVTRI
SIO_010081: AOC03_RS11970
subclass of: SO_0000673
so part of: AOC03_RS11970
location: 6961..7896
location: region:6961-7896:1
so has part: feature:6961-7896:1:exon

WP_062536809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6961-7896:1:exon

AOC03_RS11975
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
gene: repM
locus tag: AOC03_RS11975
old locus tag: AOC03_11955
so part of: sequence
location: complement(8050..9015)
location: region:8050-9015:-1
so has part: feature:8050-9015:-1:exon
subclass of: SO_0000010

position:8050:-1
position: 8050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9015:-1
position: 9015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8050-9015:-1:exon

AOC03_RS11975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
gene: repM
locus tag: AOC03_RS11975
old locus tag: AOC03_11955
inference: COORDINATES: protein motif:HMM:NF038290.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein RepM
translation: MKSDKNENMSDLVVKSNRLNTAIQNLSLVEIRLIQVAIIDSRETQTGLTADSPLRISAKRYAECFDVDIDTAYDVLLAAETTLFERRFSFVNKRDNQVKTRWVSQVEYIRGDGAIEIILTPAVVKEITRIDGLKNFFTKYLLGQTATLNSVYSVRLYELLIQWRKAKKTPLFELEVFRGQLGLGVSDYQRMSDFKRRVLDAAVAEINEKTDLRVNYKQEKEKSKIIGFRFKVLEKPKTRESKLQDGRDNNIADMFVIEELNDNQLGRIARNPSFVADYNHMVSSTSPAGQDPKAWEFEMINRLKKDASQFKKRPLREYLEY
SIO_010081: AOC03_RS11975
subclass of: SO_0000673
so part of: AOC03_RS11975
location: complement(8050..9015)
location: region:8050-9015:-1
so has part: feature:8050-9015:-1:exon

WP_062536811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8050-9015:-1:exon

AOC03_RS11980
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS11980
old locus tag: AOC03_11960
so part of: sequence
location: complement(9381..11504)
location: region:9381-11504:-1
so has part: feature:9381-11504:-1:exon
subclass of: SO_0000010

position:9381:-1
position: 9381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11504:-1
position: 11504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9381-11504:-1:exon

AOC03_RS11980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS11980
old locus tag: AOC03_11960
inference: COORDINATES: protein motif:HMM:NF015354.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobA/MobL family protein
translation: MLDYLESFFVGDTPSPKHHQKRGVQKPILRQLIMAIVHIETKAISRKAGQSAVASAAYRAGVILNDVRYDKTHDYSKKSGVMSADIILPSTLQAKGVMVSREEIWNKAENVEGRSDSRVAREWLVNLPHELNEDKRKSLAHEFAQALADKYNIIADCAIHSPSKKEVARGADPRNYHAHILVTTREAQLDANGSLFFDKQFKIPFEWSNKKRAENNLQSSIQEIKDIRQLWVDMANKALVELDITPLDARSFKDQGLDRLPTIKMGVDATHMERKGIKTDKGNENRAIRVINQRKAITKLRSEDERHVHEYIEWSGERIDWTAHRHQQVIKCLDDSQQRIESSQRDIASAARRSQLNQSVAEANLSNAEWANKRAKRLIEITDRSQQRVERDQQQAIVINNIIAESANRTPAPSPFDDHASRARATRLAEQKRRFDSAATRGDRETRYRDRQVEDAYQRAERNKQQLALLFVFRHNDTNRLKAKWMEDPDDYPDKFDYRQSDLLDQFSKDCQLERHEGEEIHSYHQRITQLMTADFRSTNQEMVNLLRDPKTERAQYNAIKQEFEDFVQALDKQREDHKDQIRLPIERLNATTDMVKVVATAVNYLQKLDDYINNETTVETNKTLAREHRGKIINRTVEAYRIACFGIPNFQIPVMYTTHTEALQGSLNNFTKGYGNELSKEQLWTLNRSYDDMSERRPTLTYKLRR
SIO_010081: AOC03_RS11980
subclass of: SO_0000673
so part of: AOC03_RS11980
location: complement(9381..11504)
location: region:9381-11504:-1
so has part: feature:9381-11504:-1:exon

WP_084785912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9381-11504:-1:exon

AOC03_RS11985
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS11985
old locus tag: AOC03_11965
so part of: sequence
location: 11799..12788
location: region:11799-12788:1
so has part: feature:11799-12788:1:exon
subclass of: SO_0000010

position:11799:1
position: 11799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12788:1
position: 12788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11799-12788:1:exon

AOC03_RS11985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS11985
old locus tag: AOC03_11965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005446460.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA cytosine methyltransferase
translation: MSYKVASLFSGAGGLDLGFQESGFDIIYANEKDKNIWETYELNHPDTYLDRRSITDVQSADIPTVDGIIGGPPCQSWSAGGSKRGIEDPRGQLFFDFIRILEEKQPKFFLAENVSGMLAKRHEESLENIMELLGAAGYDIFFSTLNAADYGVAQDRKRVIFIGFRKDLKIDYSFPPPIEKKKYLKDIILDLSDSALPALNKSKPNIELATPNHEYMTGGFSPMYMSRNRVRSWDEPSFTIQASGRQSPIHPSAPKMIKIEQDIHEFVSGHEYRRMSVRESARIQGFPDNFIFKYKDLNDGYKMIGNAVNVQFARILADSIKDAINKSYG
SIO_010081: AOC03_RS11985
subclass of: SO_0000673
so part of: AOC03_RS11985
location: 11799..12788
location: region:11799-12788:1
so has part: feature:11799-12788:1:exon

WP_062536815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11799-12788:1:exon

AOC03_RS11990
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS11990
old locus tag: AOC03_11970
so part of: sequence
location: complement(12801..13700)
location: region:12801-13700:-1
so has part: feature:12801-13700:-1:exon
subclass of: SO_0000010

position:12801:-1
position: 12801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13700:-1
position: 13700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12801-13700:-1:exon

AOC03_RS11990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS11990
old locus tag: AOC03_11970
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPRYNEFESHLVQLFNASENLSWRDKSYSEIVACKPATQGSGGECKTDIYVSLRNMGQEEDSIKITVKKADAEFLVNKMTANDAESLFGCDWVSILTESMKPIEKQFRQSKLIYVKPQKNPKDLFFTLGWKLEITNKIRNLSSELKLSPNDIVDKVYRGTEQPKRRKDGLVGNLVIENSGVADYLLEGDSIDFSDAQSVLNNLIDLSNYTPPPVYLAFTANNYRLIANKADGKRTLAVAIEWSLSNGRLVPKFIFESPLKYQGETHMMPFIKSALAEIGITTQSVDTNFLEEIDVESLQ
SIO_010081: AOC03_RS11990
subclass of: SO_0000673
so part of: AOC03_RS11990
location: complement(12801..13700)
location: region:12801-13700:-1
so has part: feature:12801-13700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12801-13700:-1:exon

AOC03_RS11995
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS11995
old locus tag: AOC03_11975
so part of: sequence
location: complement(14056..14643)
location: region:14056-14643:-1
so has part: feature:14056-14643:-1:exon
subclass of: SO_0000010

position:14056:-1
position: 14056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14643:-1
position: 14643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14056-14643:-1:exon

AOC03_RS11995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS11995
old locus tag: AOC03_11975
inference: COORDINATES: protein motif:HMM:NF021518.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2247 family protein
translation: MRYTGVELAAVTTIIQDTEKLNVKNISIPFSFLKENNIVLSEKEVDFAISRKIIDLQDLGKIVDVSLINYPDSQYLLEIALNILLNGSYLNPYVQYLEIDYSGVNREDGTIIIDDERVNDRLRYIILLWLFKNRLNSDADFDKVNSVYDDFSYPSDMIGFISYMPTKESGNKRMSNLIYSHWQIYLETYSYLLKT
SIO_010081: AOC03_RS11995
subclass of: SO_0000673
so part of: AOC03_RS11995
location: complement(14056..14643)
location: region:14056-14643:-1
so has part: feature:14056-14643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14056-14643:-1:exon

AOC03_RS12000
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12000
old locus tag: AOC03_11980
so part of: sequence
location: 14749..15042
location: region:14749-15042:1
so has part: feature:14749-15042:1:exon
subclass of: SO_0000010

position:14749:1
position: 14749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15042:1
position: 15042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14749-15042:1:exon

AOC03_RS12000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12000
old locus tag: AOC03_11980
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRILDLCSHLGESLRGNGIDNFAFPMREVDSILELYKTNRVLILGGDIYIKTSCKNFAPFYANWFYEGNDIEDSIIKAKDYLRIFKGKDLYVCFVA
SIO_010081: AOC03_RS12000
subclass of: SO_0000673
so part of: AOC03_RS12000
location: 14749..15042
location: region:14749-15042:1
so has part: feature:14749-15042:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14749-15042:1:exon

AOC03_RS12005
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12005
old locus tag: AOC03_11985
so part of: sequence
location: complement(15135..15704)
location: region:15135-15704:-1
so has part: feature:15135-15704:-1:exon
subclass of: SO_0000010

position:15135:-1
position: 15135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15704:-1
position: 15704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15135-15704:-1:exon

AOC03_RS12005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12005
old locus tag: AOC03_11985
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDRPWIEDNDPMKGFYDYLNEEEIAWLYGVVRAIDLNQATFNTNFFPNKVQLLDFSNYSDEPYQFELLSDLINKFNNVGSFLFWFPLNNDCSKNEFEKFEPLMIAKTPMNIMYLKKVSQSMMQMMNGGYVVADSGNNFIAIIVDGYYMLALVDDNNLPIKYEKYLKNWSLIEENLDSITAKSLIHARL
SIO_010081: AOC03_RS12005
subclass of: SO_0000673
so part of: AOC03_RS12005
location: complement(15135..15704)
location: region:15135-15704:-1
so has part: feature:15135-15704:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15135-15704:-1:exon

AOC03_RS12010
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12010
old locus tag: AOC03_11990
so part of: sequence
location: 15795..16013
location: region:15795-16013:1
so has part: feature:15795-16013:1:exon
subclass of: SO_0000010

position:15795:1
position: 15795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16013:1
position: 16013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15795-16013:1:exon

AOC03_RS12010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12010
old locus tag: AOC03_11990
inference: COORDINATES: protein motif:HMM:NF027602.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4926 domain-containing protein
translation: MLNINDVIKVSKDIQENIRSGDVGTVVHIFDVTPPVYEIEFSDDQGRTIETVPLKEEDISLYWVASTKKYSN
SIO_010081: AOC03_RS12010
subclass of: SO_0000673
so part of: AOC03_RS12010
location: 15795..16013
location: region:15795-16013:1
so has part: feature:15795-16013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15795-16013:1:exon

AOC03_RS12015
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12015
old locus tag: AOC03_11995
so part of: sequence
location: complement(16302..16625)
location: region:16302-16625:-1
so has part: feature:16302-16625:-1:exon
subclass of: SO_0000010

position:16302:-1
position: 16302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16625:-1
position: 16625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16302-16625:-1:exon

AOC03_RS12015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12015
old locus tag: AOC03_11995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011512364.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKILILSKAFQNKLWIMFLVSVVGLSACSSETEEPATNTESSEMKPVQKEDDAEDQMTASIEDTEGAGGTTYYSSNGNVENEQKADDTDTVNENNSNLDQTRARGVQ
SIO_010081: AOC03_RS12015
subclass of: SO_0000673
so part of: AOC03_RS12015
location: complement(16302..16625)
location: region:16302-16625:-1
so has part: feature:16302-16625:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16302-16625:-1:exon

AOC03_RS12020
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12020
old locus tag: AOC03_12000
so part of: sequence
location: 16942..17814
location: region:16942-17814:1
so has part: feature:16942-17814:1:exon
subclass of: SO_0000010

position:16942:1
position: 16942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17814:1
position: 17814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16942-17814:1:exon

AOC03_RS12020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12020
old locus tag: AOC03_12000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007395475.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADKSVNQNSIESALESLENTTESLSNDAVTGVEVLKGDTVVYEDGDFDDYNAVNDYETDTEDKSDTEDKSDTEDKSDTEDKSDTEDKSDTEDKSDTEDKSDAEDKSDAEDKSDTEDKSDAEDKSDTEDKSDTEDKSDTEDKSDAEDKSDTEDKSDTEDKSDAEDKHSLTINSIYQWATKLKDDLMSDKENNSDSDQEAKHGTTIANIYHWASKLKDDLLSETSGMTHEVSEKAVAMLLNRLLDSMNAELEAFDKKIEDSEGSVDNAEEERNKITTKKEKYQGMIDQLES
SIO_010081: AOC03_RS12020
subclass of: SO_0000673
so part of: AOC03_RS12020
location: 16942..17814
location: region:16942-17814:1
so has part: feature:16942-17814:1:exon

WP_062536817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16942-17814:1:exon

AOC03_RS12025
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12025
old locus tag: AOC03_12005
so part of: sequence
location: complement(18391..18759)
location: region:18391-18759:-1
so has part: feature:18391-18759:-1:exon
subclass of: SO_0000010

position:18391:-1
position: 18391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18759:-1
position: 18759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18391-18759:-1:exon

AOC03_RS12025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12025
old locus tag: AOC03_12005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNYFYFSNYELDLINSGLLIMMTKKAKKSMELTEEKREHDYEEVSLELFELCLKIKSLSNEYTNLSSHELDLIKSGLIILADCTYRQGLEKQDEALYYESFDLQFKEVWEKIHNNESTQVH
SIO_010081: AOC03_RS12025
subclass of: SO_0000673
so part of: AOC03_RS12025
location: complement(18391..18759)
location: region:18391-18759:-1
so has part: feature:18391-18759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18391-18759:-1:exon

AOC03_RS12030
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12030
old locus tag: AOC03_12010
so part of: sequence
location: 19402..20337
location: region:19402-20337:1
so has part: feature:19402-20337:1:exon
subclass of: SO_0000010

position:19402:1
position: 19402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20337:1
position: 20337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19402-20337:1:exon

AOC03_RS12030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12030
old locus tag: AOC03_12010
inference: COORDINATES: protein motif:HMM:NF024260.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MDVLSTLFQQRQHLSETKYYGVKFSGDWAYSIKSSNAIYFYLVQAGSCCISIGGATRKMYAGDVVMIANGDKHVCYALDYHGDEAKPLDRISLNCNQDIITVSEESTLNVQLILVECQYDKDPLLPLLSALPAILPEDNDSHKSQPKTFDVAVKFITLESECERLGKLAMINLWVNIVMIECLRTYIESLPETSDSWLIAMREPYLSKVLILMHDKPDYSWTTHELAKEAGMSRSSFSQRFRETVGTPPLTYLTDYRLRLAASHLRLRQNNIGQISEMVGYASNSTFSQAFKRVYGMSPKAYQQQKVVTRI
SIO_010081: AOC03_RS12030
subclass of: SO_0000673
so part of: AOC03_RS12030
location: 19402..20337
location: region:19402-20337:1
so has part: feature:19402-20337:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19402-20337:1:exon

AOC03_RS12035
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
gene: repM
locus tag: AOC03_RS12035
old locus tag: AOC03_12015
so part of: sequence
location: complement(20491..21456)
location: region:20491-21456:-1
so has part: feature:20491-21456:-1:exon
subclass of: SO_0000010

position:20491:-1
position: 20491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21456:-1
position: 21456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20491-21456:-1:exon

AOC03_RS12035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
gene: repM
locus tag: AOC03_RS12035
old locus tag: AOC03_12015
inference: COORDINATES: protein motif:HMM:NF038290.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein RepM
translation: MKSDKNENMSDLVVKSNRLNTAIQNLSLVEIRLIQVAIIDSRETQTGLTADSPLRISAKRYAECFDVDIDTAYDVLLAAETTLFERRFSFVNKRDNQVKTRWVSQVEYIRGDGAIEIILTPAVVKEITRIDGLKNFFTKYLLGQTATLNSVYSVRLYELLIQWRKAKKTPLFELEVFRGQLGLGVSDYQRMSDFKRRVLDAAVAEINEKTDLRVNYKQEKEKSKIIGFRFKVLEKPKTRESKLQDGRDNNIADMFVIEELNDNQLGRIARNPSFVADYNHMVSSTSPAGQDPKAWEFEMINRLKKDASQFKKRPLREYLEY
SIO_010081: AOC03_RS12035
subclass of: SO_0000673
so part of: AOC03_RS12035
location: complement(20491..21456)
location: region:20491-21456:-1
so has part: feature:20491-21456:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20491-21456:-1:exon

AOC03_RS12040
type: Gene
subclass of: SO_0000704
RO_0002162: 45610
locus tag: AOC03_RS12040
old locus tag: AOC03_12020
so part of: sequence
location: complement(21971..23932)
location: region:21971-23932:-1
so has part: feature:21971-23932:-1:exon
subclass of: SO_0000010

position:21971:-1
position: 21971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23932:-1
position: 23932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21971-23932:-1:exon

AOC03_RS12040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45610
locus tag: AOC03_RS12040
old locus tag: AOC03_12020
inference: COORDINATES: protein motif:HMM:NF015354.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobA/MobL family protein
translation: MLDYLESFFVGDTPSPKHHQKRGVQKPILRQLIMAIVHIETKAISRKAGQSAVASAAYRAGVILNDVRYDKTHDYSKKSGVMSADIILPSTLQAKGVMVSREEIWNKAENVEGRSDSRVAREWLVNLPHELNEDKRKSLAHEFAQALADKYNIIADCAIHSPSKKEVARGADPRNYHAHILVTTREAQLDANGSLFFDKQFKIPFEWSNKKRAENNLQSSIQEIKDIRQLWVDMANKALVELDITPLDARSFKDQGLDRLPTIKMGVDATHMERKGIKTDKGNENRAIRVINQRKAINKLRSEDERHVHEYIEWSCERIEWTAHRHQQVIKCLDDSQQRIESSKRGIASAARRSQLNQSVAEANLSNAEWANKRAKRLIKITGTSQQSIARDQQQAIVINKIIAESANRTPAPSPFDDHASRARATRLAEQKRRFDSAATRGDRETRYRDRQVEDAYQRAERNKQQLALLFVFRHNDTNRLKAKWMEDPDDYPDKFDYRQSDLLDQFSKDCQLERHEGEEIHSYHQRITQLMTADFRSTNQEMVNLLRDPKTERAQYNAIKQEFEDFVQALDKQREDHKDQIRLPIERLNATTDMVKVVATAVNYLQKLDDYINNETTVETNKTLAREHRGKTINRTVEAYRIACFGIPNFQT
SIO_010081: AOC03_RS12040
subclass of: SO_0000673
so part of: AOC03_RS12040
location: complement(21971..23932)
location: region:21971-23932:-1
so has part: feature:21971-23932:-1:exon

WP_084785913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21971-23932:-1:exon