Metamycoplasma alkalescens strain NCTC10135 chromosome 1, complete sequence.
Metamycoplasma alkalescens (Mycoplasma alkalescens)
Bacteria; Mycoplasmatota; Mycoplasmoidales; Metamycoplasmataceae; Metamycoplasma.
Submitted (08-JUN-2018) WTSI, Pathogen Informatics, Wellcome Trust Sanger Institute, CB10 1SA, United Kingdom
REFSEQ INFORMATION: The reference sequence is identical to\nLS991949.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/24/2023 22:42:40\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 697\nCDSs (total) :: 655\nGenes (coding) :: 652\nCDSs (with protein) :: 652\nGenes (RNA) :: 42\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 33\nncRNAs :: 3\nPseudo Genes (total) :: 3\nCDSs (without protein) :: 3\nPseudo Genes (ambiguous residues) :: 0 of 3\nPseudo Genes (frameshifted) :: 1 of 3\nPseudo Genes (incomplete) :: 2 of 3\nPseudo Genes (internal stop) :: 0 of 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_004425374.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_012855286.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881393.1
RNA-binding S4 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011113782.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004425367.1
5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase
COORDINATES: similar to AA sequence:RefSeq:WP_002881386.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881384.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_002881383.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF013860.2
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_002881379.1
COORDINATES: similar to AA sequence:RefSeq:WP_004425352.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881376.1
COORDINATES: similar to AA sequence:RefSeq:WP_004425348.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881372.1
COORDINATES: similar to AA sequence:RefSeq:WP_004423637.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_002881369.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004423639.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_002881365.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004423649.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855346.1
GO:0016990 - arginine deiminase activity [Evidence IEA]
GO:0019546 - arginine deiminase pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881358.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881356.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF033563.0
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881354.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881352.1
COORDINATES: similar to AA sequence:RefSeq:WP_014893942.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881347.1
GO:0005886 - plasma membrane [Evidence IEA]
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002881345.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881344.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881343.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881342.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: protein motif:HMM:NF033817.2
COORDINATES: similar to AA sequence:RefSeq:WP_004423536.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881337.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881335.1
alkylphosphonate ABC transporter substrate-binidng protein
COORDINATES: similar to AA sequence:RefSeq:WP_002881330.1
GO:0003676 - nucleic acid binding [Evidence IEA]
S1 RNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002881328.1
COORDINATES: similar to AA sequence:RefSeq:WP_020002466.1
COORDINATES: similar to AA sequence:RefSeq:WP_004423773.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002881325.1
GO:0015444 - P-type magnesium transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881324.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881323.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_002881321.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855626.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881315.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881312.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881311.1
COORDINATES: similar to AA sequence:RefSeq:WP_004423802.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855678.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004423984.1
GO:0043937 - regulation of sporulation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881300.1
GO:0008776 - acetate kinase activity [Evidence IEA]
GO:0006083 - acetate metabolic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881299.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881297.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424079.1
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: similar to AA sequence:RefSeq:WP_002881291.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_002881290.1
GO:0019843 - rRNA binding [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004424084.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004424086.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881285.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881283.1
Tex-like N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002881282.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424096.1
GO:0004177 - aminopeptidase activity [Evidence IEA]
GO:0030163 - protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020002518.1
COORDINATES: protein motif:HMM:NF015347.2
BspA family leucine-rich repeat surface protein
COORDINATES: similar to AA sequence:RefSeq:WP_002881273.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881272.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881271.1
COORDINATES: protein motif:HMM:TIGR00497.1
GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
type I restriction-modification system subunit M
COORDINATES: protein motif:HMM:NF037510.2
GO:0019812 - type I site-specific deoxyribonuclease complex [Evidence IEA]
GO:0009035 - type I site-specific deoxyribonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
HsdR family type I site-specific deoxyribonuclease
COORDINATES: protein motif:HMM:NF012798.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611929.1
COORDINATES: protein motif:HMM:NF013579.2
COORDINATES: protein motif:HMM:NF024880.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881257.1
tRNA1(Val) (adenine(37)-N6)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002881251.1
GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881249.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855415.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881242.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424123.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881240.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881233.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424135.1
COORDINATES: similar to AA sequence:RefSeq:WP_011285383.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855424.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881219.1
GO:0005515 - protein binding [Evidence IEA]
putative immunoglobulin-blocking virulence protein
COORDINATES: similar to AA sequence:RefSeq:WP_004424289.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881212.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881210.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881207.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881205.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881204.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012855543.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0032549 - ribonucleoside binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_002881201.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_002881158.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424302.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881191.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881189.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424308.1
COORDINATES: similar to AA sequence:RefSeq:WP_004417114.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424310.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424312.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881182.1
COORDINATES: similar to AA sequence:RefSeq:WP_020002427.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014886079.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881177.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424324.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881134.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881133.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002351833.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002881130.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF008919.0
COORDINATES: similar to AA sequence:RefSeq:WP_012855571.1
COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881120.1
COORDINATES: similar to AA sequence:RefSeq:WP_020002420.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004024697.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855566.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855565.1
COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881104.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424374.1
COORDINATES: similar to AA sequence:RefSeq:WP_003948630.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881097.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424382.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004416995.1
COORDINATES: similar to AA sequence:RefSeq:WP_003194373.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424389.1
COORDINATES: similar to AA sequence:RefSeq:WP_020002416.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881086.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004416986.1
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881083.1
COORDINATES: similar to AA sequence:RefSeq:WP_010874545.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855550.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004416977.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881078.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012855547.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881076.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: similar to AA sequence:RefSeq:WP_002881070.1
oligopeptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012498224.1
COORDINATES: similar to AA sequence:RefSeq:WP_004425233.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881062.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881061.1
COORDINATES: similar to AA sequence:RefSeq:WP_004425227.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881059.1
triose-phosphate isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004425223.1
COORDINATES: similar to AA sequence:RefSeq:WP_004425220.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881053.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004425217.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881049.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881048.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881046.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881033.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_020002329.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012498110.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881027.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_004415194.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881024.1
alanine/ornithine racemase family PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_002881023.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004425060.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881015.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881009.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881008.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881006.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881004.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880992.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002880990.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880986.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004415337.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880984.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880982.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880981.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880980.1
gamma-glutamylcyclotransferase family protein
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
transglutaminase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004415356.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002880971.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880967.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004424985.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_002880963.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002880962.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880960.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880930.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880927.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880924.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002880921.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424972.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880919.1
COORDINATES: similar to AA sequence:RefSeq:WP_001040566.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880917.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880916.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880914.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880911.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424946.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424943.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880903.1
NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002880901.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002880900.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002880888.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002880887.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880886.1
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002880885.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002880884.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424919.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880882.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880881.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424911.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880879.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424905.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424901.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880875.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424895.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004424890.1
COORDINATES: similar to AA sequence:RefSeq:WP_020002646.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424884.1
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_004424881.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_002880865.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880864.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002880862.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004424868.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880857.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012855468.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_002880849.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880847.1
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_002880844.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880841.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004424850.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
energy-coupling factor transporter ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_020002635.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855476.1
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_002880833.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: similar to AA sequence:RefSeq:WP_004424836.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424833.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_002880826.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880825.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004424826.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880823.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004424821.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880791.1
COORDINATES: similar to AA sequence:RefSeq:WP_020002620.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002880787.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880785.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004424520.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002880774.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002880773.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855497.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424528.1
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012498196.1
COORDINATES: similar to AA sequence:RefSeq:WP_002942223.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855501.1
COORDINATES: similar to AA sequence:RefSeq:WP_002880757.1
16S rRNA (uracil(1498)-N(3))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004424618.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855506.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_002880752.1
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: protein motif:HMM:TIGR01865.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
Cas9, originally named Csn1, is the large, multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes; Derived by automated computational analysis using gene prediction method: Protein Homology.
type II CRISPR RNA-guided endonuclease Cas9
COORDINATES: similar to AA sequence:RefSeq:WP_012498471.1
COORDINATES: similar to AA sequence:RefSeq:WP_012498470.1
COORDINATES: similar to AA sequence:RefSeq:WP_012498468.1
COORDINATES: similar to AA sequence:RefSeq:WP_012498467.1
COORDINATES: protein motif:HMM:NF015736.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
DnaB-like helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020002457.1
DNA integrity scanning protein DisA nucleotide-binding domain protein
COORDINATES: similar to AA sequence:RefSeq:WP_002882081.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424812.1
COORDINATES: similar to AA sequence:RefSeq:WP_002882078.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002882116.1
COORDINATES: similar to AA sequence:RefSeq:WP_002882123.1
COORDINATES: similar to AA sequence:RefSeq:WP_002882114.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424273.1
C-5 cytosine-specific DNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002880727.1
COORDINATES: protein motif:HMM:NF012651.2
GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002882103.1
COORDINATES: similar to AA sequence:RefSeq:WP_002882099.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009036 - type II site-specific deoxyribonuclease activity [Evidence IEA]
EcoRI family type II restriction endonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_002882098.1
COORDINATES: similar to AA sequence:RefSeq:WP_012498413.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002882083.1
COORDINATES: similar to AA sequence:RefSeq:WP_020002348.1
COORDINATES: similar to AA sequence:RefSeq:WP_002882075.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002882074.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002882073.1
COORDINATES: similar to AA sequence:RefSeq:WP_011884644.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: protein motif:HMM:TIGR00401.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_012855306.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424778.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004424774.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855303.1
COORDINATES: similar to AA sequence:RefSeq:WP_002882063.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424766.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424764.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004424761.1
COORDINATES: similar to AA sequence:RefSeq:WP_002882058.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424754.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002882053.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881826.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456533.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011076952.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002882052.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424724.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855387.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002882047.1
COORDINATES: similar to AA sequence:RefSeq:WP_002882046.1
COORDINATES: similar to AA sequence:RefSeq:WP_002882045.1
COORDINATES: similar to AA sequence:RefSeq:WP_002882044.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012855382.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002882039.1
COORDINATES: similar to AA sequence:RefSeq:WP_002882038.1
COORDINATES: similar to AA sequence:RefSeq:WP_012498048.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002882036.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424681.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002882034.1
COORDINATES: similar to AA sequence:RefSeq:WP_002882033.1
GO:0008150 - biological_process [Evidence IEA]
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_002882030.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002882028.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424671.1
COORDINATES: similar to AA sequence:RefSeq:WP_020002711.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004424666.1
COORDINATES: similar to AA sequence:RefSeq:WP_002882022.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424661.1
COORDINATES: similar to AA sequence:RefSeq:WP_002882015.1
COORDINATES: similar to AA sequence:RefSeq:WP_002882012.1
COORDINATES: similar to AA sequence:RefSeq:WP_002882011.1
COORDINATES: similar to AA sequence:RefSeq:WP_002882010.1
COORDINATES: similar to AA sequence:RefSeq:WP_002882008.1
COORDINATES: similar to AA sequence:RefSeq:WP_004425247.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881993.1
COORDINATES: similar to AA sequence:RefSeq:WP_004425251.1
COORDINATES: similar to AA sequence:RefSeq:WP_004425253.1
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881989.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012498077.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881986.1
COORDINATES: similar to AA sequence:RefSeq:WP_004425261.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881983.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881982.1
COORDINATES: similar to AA sequence:RefSeq:WP_004422985.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881977.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881976.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881975.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881973.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881972.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012855781.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881970.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF024642.2
COORDINATES: similar to AA sequence:RefSeq:WP_004416875.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881968.1
COORDINATES: similar to AA sequence:RefSeq:WP_012497997.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_002881964.1
GO:0002949 - tRNA threonylcarbamoyladenosine modification [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: similar to AA sequence:RefSeq:WP_002881963.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_012498416.1
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_002881958.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881933.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881932.1
isochorismatase family cysteine hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_002881930.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881928.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881927.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0015716 - organic phosphonate transport [Evidence IEA]
phosphonate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002881926.1
PhnD/SsuA/transferrin family substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002881925.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881924.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881923.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881922.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
5'-3' exonuclease H3TH domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013456242.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881898.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881858.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881857.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881856.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456133.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881808.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881806.1
COORDINATES: protein motif:HMM:NF020419.2
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002881433.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881434.1
COORDINATES: similar to AA sequence:RefSeq:WP_012498071.1
COORDINATES: protein motif:HMM:TIGR00168.2
COORDINATES: similar to AA sequence:RefSeq:WP_002881445.1
COORDINATES: similar to AA sequence:RefSeq:WP_004423555.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: similar to AA sequence:RefSeq:WP_002881448.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004423547.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_002881454.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881457.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881458.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855704.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881460.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881462.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881464.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_002881510.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881541.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881543.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004423410.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004423406.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855693.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016116.2
COORDINATES: protein motif:HMM:TIGR01550.1
GO:0016301 - kinase activity [Evidence IEA]
type II toxin-antitoxin system death-on-curing family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_004423245.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881557.1
COORDINATES: similar to AA sequence:RefSeq:WP_004423243.1
COORDINATES: similar to AA sequence:RefSeq:WP_004416581.1
COORDINATES: similar to AA sequence:RefSeq:WP_004423241.1
COORDINATES: similar to AA sequence:RefSeq:WP_020002607.1
COORDINATES: similar to AA sequence:RefSeq:WP_004423239.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881568.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
ribonuclease III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002881570.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881572.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881574.1
COORDINATES: similar to AA sequence:RefSeq:WP_004423232.1
COORDINATES: similar to AA sequence:RefSeq:WP_004423230.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004423228.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012855733.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_004423224.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: similar to AA sequence:RefSeq:WP_002881580.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_002881581.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881585.1
COORDINATES: similar to AA sequence:RefSeq:WP_012498525.1
COORDINATES: similar to AA sequence:RefSeq:WP_004423212.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855723.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881592.1
COORDINATES: similar to AA sequence:RefSeq:WP_004423202.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855720.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881597.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881599.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881601.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881602.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881604.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
cysteine peptidase family C39 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004423184.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881607.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004423178.1
COORDINATES: similar to AA sequence:RefSeq:WP_004423173.1
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_002881611.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: similar to AA sequence:RefSeq:WP_002881613.1
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881615.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881617.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_002881619.1
COORDINATES: similar to AA sequence:RefSeq:WP_004423158.1
COORDINATES: similar to AA sequence:RefSeq:WP_020002549.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881623.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008973 - phosphopentomutase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881625.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881626.1
COORDINATES: similar to AA sequence:RefSeq:WP_004423148.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881629.1
leucine-rich repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002881630.1
COORDINATES: protein motif:HMM:NF013704.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881633.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881635.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012855643.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881643.1
COORDINATES: similar to AA sequence:RefSeq:WP_014886312.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881647.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881648.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881651.1
GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881652.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881653.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881654.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04313.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881658.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881660.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855766.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881773.1
nicotinate-nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002881775.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881776.1
iron-sulfur cluster assembly scaffold protein
COORDINATES: similar to AA sequence:RefSeq:WP_004423028.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_002881780.1
COORDINATES: similar to AA sequence:RefSeq:WP_004423032.1
transcription antitermination protein NusB
COORDINATES: similar to AA sequence:RefSeq:WP_012855397.1
GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004423044.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881787.1
COORDINATES: similar to AA sequence:RefSeq:WP_004423050.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012855393.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_012855391.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881791.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881792.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881794.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855605.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881801.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004423076.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881803.1
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012855609.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881873.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00011
COORDINATES: similar to AA sequence:RefSeq:WP_002881901.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881874.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881921.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881920.1
COORDINATES: similar to AA sequence:RefSeq:WP_004423119.1
YhjD/YihY/BrkB family envelope integrity protein
COORDINATES: similar to AA sequence:RefSeq:WP_002881918.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_002881917.1
COORDINATES: similar to AA sequence:RefSeq:WP_004416790.1
glutamyl-tRNA(Gln) amidotransferase subunit C
COORDINATES: similar to AA sequence:RefSeq:WP_012855319.1
COORDINATES: similar to AA sequence:RefSeq:WP_004423099.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881911.1
COORDINATES: similar to AA sequence:RefSeq:WP_020002450.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004423093.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: similar to AA sequence:RefSeq:WP_004423088.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881899.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881810.1
COORDINATES: similar to AA sequence:RefSeq:WP_012855540.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881162.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881430.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881426.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881425.1
RpiB/LacA/LacB family sugar-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_012855661.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881423.1
GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881422.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881421.1
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_012855800.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881419.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881416.1
COORDINATES: protein motif:HMM:NF014871.2
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
bifunctional UDP-sugar hydrolase/5'-nucleotidase
COORDINATES: similar to AA sequence:RefSeq:WP_004425017.1
GO:0008959 - phosphate acetyltransferase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881412.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881411.1
dihydrolipoamide acetyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017697976.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_004425009.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004425007.1
GO:0017118 - lipoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002881405.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881404.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881403.1
COORDINATES: similar to AA sequence:RefSeq:WP_012498448.1
COORDINATES: similar to AA sequence:RefSeq:WP_002881401.1
COORDINATES: similar to AA sequence:RefSeq:WP_012498555.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004416307.1