Opitutus terrae PB90-1, complete sequence.
Bacteria; Verrucomicrobiota; Opitutae; Opitutales; Opitutaceae; Opitutus.
Genome sequence of the verrucomicrobium Opitutus terrae PB90-1, an abundant inhabitant of rice paddy soil ecosystems
Complete sequence of Opitutus terrae PB90-1
Submitted (03-APR-2008) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP001032.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4042883\nSource DNA and bacteria available from Hauke Smidt\n(Hauke.Smidt@wur.nl)\nContacts: Hauke Smidt (Hauke.Smidt@wur.nl)\n Paul Richardson (microbes@cuba.jgi-psf.org)\nQuality assurance done by JGI-Stanford\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-PGF\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. it is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/12/2023 16:47:06\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,696\nCDSs (total) :: 4,616\nGenes (coding) :: 4,605\nCDSs (with protein) :: 4,605\nGenes (RNA) :: 80\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 73\nncRNAs :: 4\nPseudo Genes (total) :: 11\nCDSs (without protein) :: 11\nPseudo Genes (ambiguous residues) :: 0 of 11\nPseudo Genes (frameshifted) :: 0 of 11\nPseudo Genes (incomplete) :: 11 of 11\nPseudo Genes (internal stop) :: 0 of 11\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_007364129.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: similar to AA sequence:RefSeq:WP_012372834.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF016763.2
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF040322.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007358909.1
COORDINATES: protein motif:HMM:NF016424.2
COORDINATES: protein motif:HMM:NF015944.2
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:NF013866.2
COORDINATES: protein motif:HMM:NF013832.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363235.1
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF025559.2
L-2-amino-thiazoline-4-carboxylic acid hydrolase
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: protein motif:HMM:TIGR03434.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009509611.1
GO:0003824 - catalytic activity [Evidence IEA]
adenylyltransferase/cytidyltransferase family protein
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF014385.2
COORDINATES: protein motif:HMM:NF013335.2
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: protein motif:HMM:NF012371.2
COORDINATES: protein motif:HMM:NF014116.2
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
carbohydrate binding domain-containing protein
COORDINATES: protein motif:HMM:NF014237.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: protein motif:HMM:NF012387.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: protein motif:HMM:NF014068.2
COORDINATES: protein motif:HMM:NF014017.2
COORDINATES: similar to AA sequence:RefSeq:WP_003862851.1
COORDINATES: protein motif:HMM:NF022603.2
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:NF025013.2
COORDINATES: protein motif:HMM:NF012385.2
sigma-54 dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF005214.0
GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012372874.1
GO:0045027 - DNA end binding [Evidence IEA]
GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009510527.1
COORDINATES: protein motif:HMM:NF024799.2
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF006829.0
COORDINATES: protein motif:HMM:NF012584.2
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007361954.1
GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007361955.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362843.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362844.1
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: protein motif:HMM:NF022823.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363949.1
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_009512022.1
COORDINATES: protein motif:HMM:NF019845.2
COORDINATES: protein motif:HMM:NF022072.2
LytTR family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF014567.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360317.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360316.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509348.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360480.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509349.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509356.1
carboxypeptidase regulatory-like domain-containing protein
COORDINATES: protein motif:HMM:NF012437.2
adenylate/guanylate cyclase domain-containing protein
COORDINATES: protein motif:HMM:TIGR02937.1
GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:TIGR02601.1
autotransporter-associated beta strand repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012372912.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009510558.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362661.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362033.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362032.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362031.1
COORDINATES: protein motif:HMM:NF025598.2
COORDINATES: protein motif:HMM:NF024893.2
AsmA-like C-terminal region-containing protein
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508979.1
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018178.2
COORDINATES: similar to AA sequence:RefSeq:WP_007360719.1
COORDINATES: similar to AA sequence:RefSeq:WP_012372926.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014033.2
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007360323.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362518.1
COORDINATES: protein motif:HMM:NF015709.2
COORDINATES: similar to AA sequence:RefSeq:WP_009508763.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF015531.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007364235.1
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: protein motif:HMM:NF019533.2
COORDINATES: similar to AA sequence:RefSeq:WP_007360444.1
COORDINATES: similar to AA sequence:RefSeq:WP_007358647.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013567.2
COORDINATES: protein motif:HMM:NF013429.2
sugar phosphate isomerase/epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012373813.1
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012245.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF038131.1
choice-of-anchor K domain-containing protein
COORDINATES: protein motif:HMM:NF015658.2
COORDINATES: protein motif:HMM:NF037959.1
COORDINATES: protein motif:HMM:NF021505.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00741.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: protein motif:HMM:TIGR01241.2
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:NF019057.2
COORDINATES: protein motif:HMM:NF014523.2
COORDINATES: protein motif:HMM:NF016301.2
COORDINATES: protein motif:HMM:NF024602.2
COORDINATES: protein motif:HMM:NF009381.0
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF020123.2
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012377.2
COORDINATES: protein motif:HMM:NF024917.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:NF025006.2
COORDINATES: protein motif:HMM:TIGR03562.1
COORDINATES: protein motif:HMM:NF017088.2
COORDINATES: protein motif:HMM:NF015875.2
COORDINATES: similar to AA sequence:RefSeq:WP_009513175.1
GO:0006002 - fructose 6-phosphate metabolic process [Evidence IEA]
pyrophosphate--fructose-6-phosphate 1-phosphotransferase
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: similar to AA sequence:RefSeq:WP_012376569.1
COORDINATES: similar to AA sequence:RefSeq:WP_001411749.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007361328.1
biosynthetic-type acetolactate synthase large subunit
COORDINATES: protein motif:HMM:NF024627.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: protein motif:HMM:NF012257.2
cyclic nucleotide-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012742.2
COORDINATES: protein motif:HMM:NF022039.2
COORDINATES: protein motif:HMM:TIGR02824.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360589.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363222.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362820.1
Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26; Derived by automated computational analysis using gene prediction method: Protein Homology.
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: similar to AA sequence:RefSeq:WP_012373006.1
GO:0140110 - transcription regulator activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362818.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511876.1
histidine triad nucleotide-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009509139.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009512463.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009508009.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012373013.1
GO:0033856 - pyridoxine 5'-phosphate synthase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359979.1
GO:0046912 - acyltransferase activity, acyl groups converted into alkyl on transfer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359761.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_007359955.1
GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: similar to AA sequence:RefSeq:WP_009509303.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359957.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012373021.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017197.2
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_012372865.1
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: similar to AA sequence:RefSeq:WP_007361408.1
COORDINATES: similar to AA sequence:RefSeq:WP_017042856.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007359208.1
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012373031.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003130556.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373033.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359204.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512988.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359202.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012373037.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003194373.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359199.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373040.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012373041.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373042.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359195.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373044.1
COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512990.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373047.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373048.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373049.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373050.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012373051.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012373052.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373053.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512992.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512993.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373056.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009512994.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373058.1
COORDINATES: similar to AA sequence:RefSeq:WP_016293564.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373060.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_007360541.1
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_009513549.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360543.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009513550.1
COORDINATES: similar to AA sequence:RefSeq:WP_016293571.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360546.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_007360547.1
COORDINATES: similar to AA sequence:RefSeq:WP_003640798.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009513968.1
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009510467.1
COORDINATES: protein motif:HMM:NF013594.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362080.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363070.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508588.1
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: protein motif:HMM:NF012678.2
COORDINATES: protein motif:HMM:NF024911.2
COORDINATES: protein motif:HMM:TIGR01528.1
GO:0015663 - nicotinamide mononucleotide transmembrane transporter activity [Evidence IEA]
GO:0015890 - nicotinamide mononucleotide transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360429.1
GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:NF028240.2
COORDINATES: protein motif:HMM:NF013961.2
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:TIGR04393.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373093.1
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: similar to AA sequence:RefSeq:WP_009509462.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: protein motif:HMM:NF001664.0
COORDINATES: similar to AA sequence:RefSeq:WP_009511978.1
GO:0045900 - negative regulation of translational elongation [Evidence IEA]
energy-dependent translational throttle protein EttA
COORDINATES: protein motif:HMM:NF013126.2
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
glycoside hydrolase family 3 C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009513050.1
COORDINATES: protein motif:HMM:NF021049.2
YiiD C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012374691.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509975.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007361744.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_007358654.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363071.1
GO:0004401 - histidinol-phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021361.2
COORDINATES: similar to AA sequence:RefSeq:WP_007358626.1
GO:0033739 - preQ1 synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012373111.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021254.2
exosortase/archaeosortase family protein
COORDINATES: protein motif:HMM:NF013630.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013862.2
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: similar to AA sequence:RefSeq:WP_007362281.1
FtsW/RodA/SpoVE family cell cycle protein
COORDINATES: similar to AA sequence:RefSeq:WP_009514084.1
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF041384.1
COORDINATES: similar to AA sequence:RefSeq:WP_012376583.1
COORDINATES: protein motif:HMM:NF024880.2
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF018473.2
COORDINATES: protein motif:HMM:NF013543.2
COORDINATES: protein motif:HMM:TIGR04283.1
GO:0016740 - transferase activity [Evidence IEA]
TIGR04283 family arsenosugar biosynthesis glycosyltransferase
COORDINATES: protein motif:HMM:TIGR04167.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
Some members of this family are selenoproteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
arsenosugar biosynthesis radical SAM protein ArsS
COORDINATES: protein motif:HMM:NF016658.2
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:NF004991.0
COORDINATES: protein motif:HMM:NF017183.2
COORDINATES: protein motif:HMM:NF021606.2
COORDINATES: protein motif:HMM:NF019113.2
COORDINATES: similar to AA sequence:RefSeq:WP_009510661.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: similar to AA sequence:RefSeq:WP_007362656.1
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF012321.2
von Willebrand factor type A domain-containing protein
COORDINATES: protein motif:HMM:NF015617.2
GO:0046556 - alpha-L-arabinofuranosidase activity [Evidence IEA]
GO:0046373 - L-arabinose metabolic process [Evidence IEA]
non-reducing end alpha-L-arabinofuranosidase family hydrolase
COORDINATES: protein motif:HMM:NF018647.2
alpha-L-arabinofuranosidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: protein motif:HMM:NF015431.2
LysR substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013053.2
COORDINATES: protein motif:HMM:NF021378.2
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: protein motif:HMM:NF013440.2
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_007358591.1
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF013989.2
prolyl oligopeptidase family serine peptidase
COORDINATES: protein motif:HMM:NF012298.2
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016497.2
COORDINATES: protein motif:HMM:NF024140.2
COORDINATES: similar to AA sequence:RefSeq:WP_012373262.1
COORDINATES: protein motif:HMM:NF013736.2
COORDINATES: similar to AA sequence:RefSeq:WP_012376163.1
COORDINATES: protein motif:HMM:NF014228.2
COORDINATES: similar to AA sequence:RefSeq:WP_012373200.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: similar to AA sequence:RefSeq:WP_009510557.1
COORDINATES: protein motif:HMM:NF025670.2
COORDINATES: protein motif:HMM:NF021041.2
GO:0030570 - pectate lyase activity [Evidence IEA]
GO:0045490 - pectin catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012401.2
COORDINATES: protein motif:HMM:NF012593.2
dicarboxylate/amino acid:cation symporter
COORDINATES: similar to AA sequence:RefSeq:WP_007363291.1
COORDINATES: protein motif:HMM:TIGR01352.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012373273.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363302.1
GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014660.2
COORDINATES: protein motif:HMM:NF012874.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363299.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF016985.2
COORDINATES: protein motif:HMM:NF021638.2
COORDINATES: similar to AA sequence:RefSeq:WP_009507973.1
flagellar basal body P-ring protein FlgI
COORDINATES: protein motif:HMM:NF014195.2
flagellar basal body L-ring protein FlgH
COORDINATES: protein motif:HMM:TIGR03170.1
GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]
flagellar basal body P-ring formation chaperone FlgA
COORDINATES: similar to AA sequence:RefSeq:WP_007363293.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03506.1
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363307.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363308.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
FliA/WhiG family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_007363311.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363312.1
EscU/YscU/HrcU family type III secretion system export apparatus switch protein
COORDINATES: protein motif:HMM:NF013478.2
GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363315.1
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009507957.1
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: protein motif:HMM:NF016250.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363318.1
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363319.1
FliM/FliN family flagellar motor switch protein
COORDINATES: similar to AA sequence:RefSeq:WP_007363320.1
flagellar basal body-associated FliL family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009507953.1
flagellar hook-basal body complex protein
COORDINATES: protein motif:HMM:NF015896.2
flagellar hook capping FlgD N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014144.2
COORDINATES: similar to AA sequence:RefSeq:WP_009507949.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363328.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009507946.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: similar to AA sequence:RefSeq:WP_007363330.1
flagellar hook-basal body complex protein FliE
COORDINATES: similar to AA sequence:RefSeq:WP_007363331.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363332.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009507944.1
protein-glutamate O-methyltransferase CheR
COORDINATES: similar to AA sequence:RefSeq:WP_007363334.1
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: similar to AA sequence:RefSeq:WP_009507942.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507941.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363337.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363339.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363279.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507987.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507967.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507990.1
COORDINATES: protein motif:HMM:NF018852.2
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012373274.1
COORDINATES: protein motif:HMM:NF014075.2
COORDINATES: protein motif:HMM:NF016145.2
polysaccharide pyruvyl transferase family protein
COORDINATES: protein motif:HMM:NF024969.2
COORDINATES: protein motif:HMM:TIGR01662.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01444.1
COORDINATES: protein motif:HMM:NF013308.2
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: protein motif:HMM:NF024914.2
COORDINATES: protein motif:HMM:NF025214.2
COORDINATES: protein motif:HMM:NF020252.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363264.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363263.1
PAS domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF024100.2
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: similar to AA sequence:RefSeq:WP_009513676.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360180.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360182.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0006231 - dTMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024189.2
COORDINATES: similar to AA sequence:RefSeq:WP_012373301.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511069.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511071.1
GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012373304.1
NADH-quinone oxidoreductase subunit NuoK
COORDINATES: protein motif:HMM:NF012709.2
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360957.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511074.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360955.1
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007360954.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: similar to AA sequence:RefSeq:WP_009511077.1
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_012373311.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360951.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373313.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoB
COORDINATES: protein motif:HMM:NF017280.2
COORDINATES: similar to AA sequence:RefSeq:WP_012376044.1
COORDINATES: protein motif:HMM:NF025910.2
COORDINATES: similar to AA sequence:RefSeq:WP_009511784.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012373319.1
COORDINATES: similar to AA sequence:RefSeq:WP_012376010.1
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: protein motif:HMM:NF024907.2
COORDINATES: similar to AA sequence:RefSeq:WP_009511458.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF015291.2
GH3 auxin-responsive promoter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007361644.1
COORDINATES: protein motif:HMM:TIGR00044.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF024762.2
transglutaminase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009511547.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007361616.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360144.1
GO:0004335 - galactokinase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1
COORDINATES: protein motif:HMM:NF013720.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363069.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013069.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007362907.1
GO:0016615 - malate dehydrogenase activity [Evidence IEA]
GO:0006108 - malate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362517.1
COORDINATES: protein motif:HMM:NF012478.2
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_012373318.1
COORDINATES: protein motif:HMM:NF012576.2
LacI family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF014589.2
carbamoyltransferase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF039953.1
COORDINATES: protein motif:HMM:NF014896.2
COORDINATES: protein motif:HMM:NF024949.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF014599.2
GO:0051262 - protein tetramerization [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024098.2
COORDINATES: protein motif:HMM:NF025056.2
toll/interleukin-1 receptor domain-containing protein
COORDINATES: protein motif:HMM:TIGR02679.1
COORDINATES: protein motif:HMM:TIGR02680.1
COORDINATES: protein motif:HMM:TIGR02678.1
COORDINATES: protein motif:HMM:TIGR02677.1
COORDINATES: protein motif:HMM:NF018259.2
COORDINATES: protein motif:HMM:NF017437.2
COORDINATES: protein motif:HMM:NF020859.2
Mu transposase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF016362.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF021508.2
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF025295.2
immunoglobulin domain-containing protein
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF025330.2
COORDINATES: protein motif:HMM:NF016176.2
COORDINATES: protein motif:HMM:NF012568.2
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014486.2
cbb3-type cytochrome c oxidase subunit II
COORDINATES: protein motif:HMM:NF013793.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF024881.2
COORDINATES: protein motif:HMM:NF024743.2
DUF4097 family beta strand repeat-containing protein
COORDINATES: protein motif:HMM:NF023828.2
COORDINATES: protein motif:HMM:NF021363.2
COORDINATES: protein motif:HMM:NF013670.2
COORDINATES: protein motif:HMM:NF022577.2
COORDINATES: similar to AA sequence:RefSeq:WP_012373417.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373453.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373315.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373428.1
TonB-dependent receptor plug domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012373424.1
COORDINATES: protein motif:HMM:TIGR00538.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
oxygen-independent coproporphyrinogen III oxidase
COORDINATES: protein motif:HMM:NF013411.2
COORDINATES: similar to AA sequence:RefSeq:WP_009509942.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_009509941.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02176.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: protein motif:HMM:NF005741.0
dihydroorotate dehydrogenase-like protein
COORDINATES: protein motif:HMM:NF012698.2
COORDINATES: similar to AA sequence:RefSeq:WP_012373440.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373441.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373442.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373437.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373438.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373439.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373445.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373444.1
GO:0015288 - porin activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021942.2
COORDINATES: protein motif:HMM:TIGR00835.1
alanine/glycine:cation symporter family protein
COORDINATES: protein motif:HMM:NF012428.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF015648.2
COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1
COORDINATES: protein motif:HMM:NF012436.2
DNA starvation/stationary phase protection protein
COORDINATES: similar to AA sequence:RefSeq:WP_007358844.1
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_009513614.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513615.1
GO:0016853 - isomerase activity [Evidence IEA]
KpsF/GutQ family sugar-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_007362750.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360620.1
GO:0008150 - biological_process [Evidence IEA]
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: similar to AA sequence:RefSeq:WP_009511645.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510529.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362154.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510244.1
CPBP family intramembrane metalloprotease
COORDINATES: protein motif:HMM:NF037015.2
COORDINATES: protein motif:HMM:NF012485.2
secretin N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007361454.1
AURKAIP1/COX24 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009511414.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360809.1
COORDINATES: protein motif:HMM:TIGR00029.2
COORDINATES: protein motif:HMM:NF019575.2
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363963.1
C4-type zinc ribbon domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007363965.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_007363968.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014566.2
COORDINATES: protein motif:HMM:NF021375.2
COORDINATES: similar to AA sequence:RefSeq:WP_009508169.1
COORDINATES: protein motif:HMM:NF018506.2
GO:0015144 - carbohydrate transmembrane transporter activity [Evidence IEA]
GO:0034219 - carbohydrate transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF017936.2
COORDINATES: protein motif:HMM:NF017026.2
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359732.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: protein motif:HMM:NF015147.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359766.1
succinate dehydrogenase/fumarate reductase iron-sulfur subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007359765.1
fumarate reductase/succinate dehydrogenase flavoprotein subunit
COORDINATES: protein motif:HMM:TIGR02046.1
succinate dehydrogenase cytochrome b subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009509158.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360438.1
COORDINATES: protein motif:HMM:NF021492.2
COORDINATES: similar to AA sequence:RefSeq:WP_009508598.1
GO:0008864 - formyltetrahydrofolate deformylase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007358665.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: protein motif:HMM:NF025885.2
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: protein motif:HMM:TIGR00046.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363880.1
COORDINATES: protein motif:HMM:TIGR00056.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373515.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007361861.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360441.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012373518.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009513410.1
GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
COORDINATES: protein motif:HMM:NF014803.2
COORDINATES: protein motif:HMM:NF027964.2
saccharopine dehydrogenase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR01850.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_010017477.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373524.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511722.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508767.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373527.1
GO:0004801 - transaldolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362085.1
COORDINATES: protein motif:HMM:NF018305.2
COORDINATES: protein motif:HMM:NF024869.2
COORDINATES: protein motif:HMM:NF024214.2
COORDINATES: similar to AA sequence:RefSeq:WP_007361222.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: similar to AA sequence:RefSeq:WP_007360170.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0004611 - phosphoenolpyruvate carboxykinase activity [Evidence IEA]; GO:0017076 - purine nucleotide binding [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01297.1
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_007361434.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374066.1
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009513728.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009510403.1
COORDINATES: protein motif:HMM:NF004771.0
COORDINATES: similar to AA sequence:RefSeq:WP_012373558.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: protein motif:HMM:NF019301.2
COORDINATES: protein motif:HMM:NF021364.2
COORDINATES: protein motif:HMM:NF003818.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361414.1
COORDINATES: protein motif:HMM:NF021158.2
COORDINATES: similar to AA sequence:RefSeq:WP_012375692.1
COORDINATES: protein motif:HMM:NF013974.2
GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: protein motif:HMM:NF028456.2
COORDINATES: protein motif:HMM:TIGR02177.1
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: protein motif:HMM:NF012717.2
COORDINATES: similar to AA sequence:RefSeq:WP_012373571.1
COORDINATES: protein motif:HMM:NF012549.2
COORDINATES: similar to AA sequence:RefSeq:WP_012373573.1
Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012373.2
COORDINATES: protein motif:HMM:NF024585.2
COORDINATES: protein motif:HMM:NF004320.0
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF006236.0
monovalent cation/H+ antiporter subunit D family protein
COORDINATES: protein motif:HMM:NF009310.0
COORDINATES: protein motif:HMM:TIGR01972.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373582.1
COORDINATES: protein motif:HMM:NF013884.2
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360564.1
GO:0050661 - NADP binding [Evidence IEA]; GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
NADP-dependent phosphogluconate dehydrogenase
COORDINATES: protein motif:HMM:NF024852.2
COORDINATES: protein motif:HMM:NF013412.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012373122.1
COORDINATES: protein motif:HMM:NF012382.2
PLP-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: protein motif:HMM:NF019604.2
isochorismatase family cysteine hydrolase
COORDINATES: protein motif:HMM:NF025069.2
COORDINATES: similar to AA sequence:RefSeq:WP_009513635.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: protein motif:HMM:NF014611.2
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014494.2
COORDINATES: protein motif:HMM:NF016051.2
phosphopantothenoylcysteine decarboxylase
COORDINATES: protein motif:HMM:TIGR00671.1
GO:0004594 - pantothenate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006879.0
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00078.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: protein motif:HMM:NF013086.2
COORDINATES: similar to AA sequence:RefSeq:WP_009508407.1
COORDINATES: protein motif:HMM:NF015338.2
COORDINATES: similar to AA sequence:RefSeq:WP_009512124.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512122.1
COORDINATES: protein motif:HMM:TIGR02436.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363745.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: protein motif:HMM:NF013618.2
lytic transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:TIGR04179.1
RhlP (RHombo-target LipoProtein) is a family of predicted lipoproteins that, in general, co-occurs with a form of rhombosortase, and that has an apparent cleavage site for that enzyme, a GlyGly motif, near the C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR03902.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007359553.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361275.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509990.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510624.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361082.1
COORDINATES: protein motif:HMM:NF009057.0
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
TrpB-like pyridoxal phosphate-dependent enzyme
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010993399.1
GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013491.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
PEP/pyruvate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF017847.2
COORDINATES: protein motif:HMM:NF013633.2
COORDINATES: protein motif:HMM:NF022893.2
COORDINATES: protein motif:HMM:NF016836.2
COORDINATES: protein motif:HMM:TIGR01313.1
COORDINATES: protein motif:HMM:NF013927.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363242.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012373660.1
COORDINATES: protein motif:HMM:NF020296.2
COORDINATES: protein motif:HMM:NF009395.0
COORDINATES: similar to AA sequence:RefSeq:WP_007360191.1
BadF/BadG/BcrA/BcrD ATPase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009513489.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
sugar isomerase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009513485.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362916.1
COORDINATES: protein motif:HMM:NF014910.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013460.2
GO:0009055 - electron transfer activity [Evidence IEA]
cytochrome b/b6 domain-containing protein
COORDINATES: protein motif:HMM:TIGR00427.1
COORDINATES: protein motif:HMM:TIGR01910.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360256.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009513240.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513241.1
COORDINATES: protein motif:HMM:TIGR02608.1
immunoglobulin I-set domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009514530.1
class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007361054.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511362.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009511457.1
GO:0031956 - medium-chain fatty acid-CoA ligase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363062.1
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013046.2
COORDINATES: protein motif:HMM:NF018242.2
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024786.2
COORDINATES: protein motif:HMM:NF017833.2
COORDINATES: similar to AA sequence:RefSeq:WP_012373841.1
COORDINATES: protein motif:HMM:NF011080.0
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01782.1
GO:0019867 - outer membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: protein motif:HMM:NF024081.2
FeoB-associated Cys-rich membrane protein
COORDINATES: protein motif:HMM:TIGR00437.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: similar to AA sequence:RefSeq:WP_007361435.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020045332.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373702.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361438.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361439.1
COORDINATES: protein motif:HMM:TIGR01144.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007361441.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510409.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361443.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_000541029.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_012373710.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: protein motif:HMM:NF004231.0
COORDINATES: similar to AA sequence:RefSeq:WP_009513069.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:NF014135.2
COORDINATES: similar to AA sequence:RefSeq:WP_012374084.1
COORDINATES: protein motif:HMM:NF027681.2
COORDINATES: similar to AA sequence:RefSeq:WP_007361530.1
COORDINATES: protein motif:HMM:NF008730.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01317.1
GO:0009342 - glutamate synthase complex (NADPH) [Evidence IEA]
GO:0045181 - glutamate synthase activity, NAD(P)H as acceptor [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF022853.2
protein-disulfide reductase DsbD family protein
COORDINATES: protein motif:HMM:NF013999.2
COORDINATES: similar to AA sequence:RefSeq:WP_009507628.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507627.1
COORDINATES: protein motif:HMM:NF025615.2
COORDINATES: protein motif:HMM:NF021520.2
COORDINATES: similar to AA sequence:RefSeq:WP_012375683.1
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_007362745.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362746.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513623.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512720.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF027890.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF013117.2
COORDINATES: similar to AA sequence:RefSeq:WP_007361206.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363520.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507704.1
COORDINATES: protein motif:HMM:NF014324.2
GO:0004620 - phospholipase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012376607.1
COORDINATES: protein motif:HMM:NF013231.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363518.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362749.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362130.1
COORDINATES: protein motif:HMM:TIGR00688.1
COORDINATES: protein motif:HMM:NF015146.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363947.1
COORDINATES: protein motif:HMM:NF012305.2
COORDINATES: protein motif:HMM:NF017077.2
COORDINATES: protein motif:HMM:NF014448.2
molybdenum cofactor biosynthesis protein MoaE
COORDINATES: protein motif:HMM:NF014636.2
COORDINATES: similar to AA sequence:RefSeq:WP_018465116.1
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: protein motif:HMM:TIGR02666.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007361637.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361636.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007361633.1
GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--serine O-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007361632.1
cytotoxic translational repressor of toxin-antitoxin stability system
COORDINATES: similar to AA sequence:RefSeq:WP_012374464.1
COORDINATES: protein motif:HMM:TIGR01127.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0006549 - isoleucine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013661.2
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: protein motif:HMM:NF025734.2
COORDINATES: similar to AA sequence:RefSeq:WP_007362509.1
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: protein motif:HMM:NF009554.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0009374 - biotin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004736 - pyruvate carboxylase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017044.2
SMP-30/gluconolaconase/LRE domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007360391.1
GO:0018580 - nitronate monooxygenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013827.2
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:NF024087.2
COORDINATES: protein motif:HMM:NF013530.2
COORDINATES: protein motif:HMM:NF013782.2
GO:0016790 - thiolester hydrolase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012372948.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360371.1
COORDINATES: protein motif:HMM:NF017076.2
COORDINATES: protein motif:HMM:NF041462.1
GO:0004565 - beta-galactosidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: protein motif:HMM:NF018884.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362690.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02284.1
COORDINATES: protein motif:HMM:NF015506.2
COORDINATES: protein motif:HMM:NF012312.2
COORDINATES: protein motif:HMM:NF012931.2
COORDINATES: protein motif:HMM:NF002557.0
GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA]
GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012373877.1
GO:0008452 - RNA ligase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF019335.2
COORDINATES: protein motif:HMM:TIGR02009.1
beta-phosphoglucomutase family hydrolase
COORDINATES: protein motif:HMM:NF015588.2
COORDINATES: protein motif:HMM:NF024120.2
glycosyl hydrolase family 28-related protein
COORDINATES: protein motif:HMM:NF012612.2
GO:0005507 - copper ion binding [Evidence IEA]
multicopper oxidase domain-containing protein
COORDINATES: protein motif:HMM:NF015414.2
COORDINATES: similar to AA sequence:RefSeq:WP_003808114.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359149.1
COORDINATES: protein motif:HMM:NF019976.2
COORDINATES: protein motif:HMM:NF014066.2
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: similar to AA sequence:RefSeq:WP_007361906.1
COORDINATES: protein motif:HMM:NF013324.2
COORDINATES: similar to AA sequence:RefSeq:WP_007362482.1
bifunctional nicotinamidase/pyrazinamidase
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: protein motif:HMM:NF014586.2
GO:0008795 - NAD+ synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009514008.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007361907.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361908.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373837.1
COORDINATES: protein motif:HMM:NF025027.2
COORDINATES: protein motif:HMM:NF021631.2
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007361877.1
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF015325.2
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: similar to AA sequence:RefSeq:WP_009508533.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513491.1
COORDINATES: protein motif:HMM:NF025428.2
COORDINATES: protein motif:HMM:NF024801.2
glutathione S-transferase family protein
COORDINATES: protein motif:HMM:NF037749.2
COORDINATES: protein motif:HMM:NF019491.2
COORDINATES: protein motif:HMM:TIGR02595.1
PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm; Derived by automated computational analysis using gene prediction method: Protein Homology.
PEP-CTERM sorting domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007362113.1
COORDINATES: protein motif:HMM:NF022337.2
COORDINATES: protein motif:HMM:NF024555.2
COORDINATES: protein motif:HMM:TIGR00497.1
GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
type I restriction-modification system subunit M
COORDINATES: protein motif:HMM:NF024565.2
COORDINATES: protein motif:HMM:NF013579.2
COORDINATES: protein motif:HMM:TIGR00348.1
type I restriction endonuclease subunit R
COORDINATES: protein motif:HMM:NF019474.2
COORDINATES: protein motif:HMM:NF012551.2
COORDINATES: protein motif:HMM:NF018455.2
COORDINATES: protein motif:HMM:NF023324.2
alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase
COORDINATES: protein motif:HMM:TIGR02456.1
GO:0047471 - maltose alpha-D-glucosyltransferase activity [Evidence IEA]
GO:0005991 - trehalose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014375.2
COORDINATES: protein motif:HMM:NF014522.2
COORDINATES: protein motif:HMM:NF015331.2
COORDINATES: protein motif:HMM:NF039394.1
DUF6268 family outer membrane beta-barrel protein
COORDINATES: protein motif:HMM:NF033105.1
COORDINATES: protein motif:HMM:NF019225.2
COORDINATES: protein motif:HMM:NF017771.2
COORDINATES: protein motif:HMM:NF033617.1
multidrug efflux RND transporter permease subunit
COORDINATES: protein motif:HMM:NF008589.1
MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF021596.2
COORDINATES: protein motif:HMM:NF025701.2
protease complex subunit PrcB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009508259.1
COORDINATES: protein motif:HMM:NF022644.2
COORDINATES: similar to AA sequence:RefSeq:WP_009507541.1
D-lyxose/D-mannose family sugar isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_007362590.1
COORDINATES: protein motif:HMM:NF013215.2
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_009509832.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_007361446.1
COORDINATES: protein motif:HMM:TIGR00520.1
GO:0004067 - asparaginase activity [Evidence IEA]
GO:0006528 - asparagine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: similar to AA sequence:RefSeq:WP_007362718.1
NTP transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009514033.1
COORDINATES: protein motif:HMM:NF015585.2
COORDINATES: similar to AA sequence:RefSeq:WP_009510542.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509974.1
CinA family nicotinamide mononucleotide deamidase-related protein
COORDINATES: protein motif:HMM:NF019365.2
GO:0015926 - glucosidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025432.2
COORDINATES: protein motif:HMM:NF017742.2
COORDINATES: protein motif:HMM:NF037016.2
COORDINATES: protein motif:HMM:NF014573.2
COORDINATES: protein motif:HMM:NF013777.2
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: protein motif:HMM:NF022716.2
COORDINATES: similar to AA sequence:RefSeq:WP_012376523.1
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: similar to AA sequence:RefSeq:WP_004633731.1
GO:0009636 - response to toxic substance [Evidence IEA]
COORDINATES: protein motif:HMM:NF014376.2
COORDINATES: similar to AA sequence:RefSeq:WP_007360442.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: protein motif:HMM:TIGR00697.1
GO:1990397 - queuosine salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF013753.2
COORDINATES: protein motif:HMM:NF013704.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012493.2
COORDINATES: similar to AA sequence:RefSeq:WP_012377256.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377257.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377258.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377259.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377260.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513797.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377265.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377266.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377267.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513791.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513789.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377270.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513784.1
YMGG-like glycine zipper-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009513783.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513781.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377277.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377278.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377279.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377280.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377281.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009513775.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377283.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513841.1
COORDINATES: protein motif:HMM:NF015935.2
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF024803.2
heavy metal-responsive transcriptional regulator
COORDINATES: protein motif:HMM:NF014465.2
heavy metal-associated domain-containing protein
COORDINATES: protein motif:HMM:NF037241.2
COORDINATES: similar to AA sequence:RefSeq:WP_007362836.1
COORDINATES: protein motif:HMM:NF001579.0
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_019456581.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
PAS domain-containing hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007363770.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363769.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363765.1
COORDINATES: protein motif:HMM:NF039524.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377284.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359270.1
COORDINATES: protein motif:HMM:NF013970.2
type II toxin-antitoxin system VapC family toxin
COORDINATES: protein motif:HMM:TIGR00785.1
GO:0008509 - monoatomic anion transmembrane transporter activity [Evidence IEA]
GO:0006820 - monoatomic anion transport [Evidence IEA]
DASS family sodium-coupled anion symporter
COORDINATES: protein motif:HMM:NF013779.2
GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013348.2
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF028178.2
TAXI family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012375156.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512449.1
glucans biosynthesis glucosyltransferase MdoH
COORDINATES: similar to AA sequence:RefSeq:WP_012373717.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374457.1
COORDINATES: protein motif:HMM:NF014147.2
COORDINATES: protein motif:HMM:TIGR00792.1
COORDINATES: protein motif:HMM:NF012925.2
COORDINATES: similar to AA sequence:RefSeq:WP_014524727.1
COORDINATES: protein motif:HMM:TIGR00924.1
GO:0015333 - peptide:proton symporter activity [Evidence IEA]
GO:0015833 - peptide transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF010030.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014630.2
COORDINATES: protein motif:HMM:NF012579.2
COORDINATES: protein motif:HMM:NF014664.2
carboxymuconolactone decarboxylase family protein
COORDINATES: protein motif:HMM:NF014850.2
glycoside hydrolase family 2 TIM barrel-domain containing protein
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012669.2
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007362988.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362987.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362986.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513413.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513414.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362983.1
EutN/CcmL family microcompartment protein
COORDINATES: similar to AA sequence:RefSeq:WP_007362982.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513416.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362980.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513418.1
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007362978.1
lactate/malate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007361205.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360550.1
GO:0008740 - L-rhamnose isomerase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO:0019299 - rhamnose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009508782.1
COORDINATES: protein motif:HMM:NF006189.0
bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF019928.2
COORDINATES: protein motif:HMM:NF024248.2
winged helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF040320.1
amino acid-binding ACT domain-containing protein
COORDINATES: protein motif:HMM:NF014608.2
COORDINATES: protein motif:HMM:NF037435.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363506.1
COORDINATES: similar to AA sequence:RefSeq:WP_007364093.1
COORDINATES: protein motif:HMM:NF008712.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513154.1
GO:0016310 - phosphorylation [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
two-component system sensor histidine kinase CreC
COORDINATES: similar to AA sequence:RefSeq:WP_009513139.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
two-component system response regulator CreB
COORDINATES: protein motif:HMM:NF028108.2
COORDINATES: protein motif:HMM:TIGR04337.1
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: protein motif:HMM:NF014899.2
COORDINATES: protein motif:HMM:NF012524.2
COORDINATES: protein motif:HMM:NF013739.2
COORDINATES: similar to AA sequence:RefSeq:WP_009510544.1
two-component regulator propeller domain-containing protein
COORDINATES: protein motif:HMM:NF024863.2
COORDINATES: protein motif:HMM:NF014502.2
COORDINATES: protein motif:HMM:NF040138.1
COORDINATES: protein motif:HMM:NF037334.2
COORDINATES: protein motif:HMM:NF028442.2
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: protein motif:HMM:NF025851.2
glycoside hydrolase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF041463.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374181.1
GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IEA]
GO:0019301 - rhamnose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009509105.1
COORDINATES: protein motif:HMM:NF013400.2
COORDINATES: protein motif:HMM:NF027814.2
COORDINATES: protein motif:HMM:NF013469.2
COORDINATES: protein motif:HMM:NF027309.2
COORDINATES: protein motif:HMM:NF012318.2
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: protein motif:HMM:NF024093.2
COORDINATES: protein motif:HMM:TIGR02336.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0050500 - 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase activity [Evidence IEA]
GO:0046352 - disaccharide catabolic process [Evidence IEA]
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase
COORDINATES: protein motif:HMM:NF012993.2
carbon-nitrogen hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009514477.1
COORDINATES: protein motif:HMM:NF021253.2
COORDINATES: similar to AA sequence:RefSeq:WP_016292990.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374205.1
GO:0008733 - L-arabinose isomerase activity [Evidence IEA]
GO:0005996 - monosaccharide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009508676.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008741 - ribulokinase activity [Evidence IEA]
GO:0019569 - L-arabinose catabolic process to xylulose 5-phosphate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009508662.1
COORDINATES: protein motif:HMM:NF008277.0
COORDINATES: protein motif:HMM:TIGR00813.1
COORDINATES: similar to AA sequence:RefSeq:WP_012376975.1
COORDINATES: protein motif:HMM:NF025264.2
COORDINATES: similar to AA sequence:RefSeq:WP_009514238.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361200.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO:0019516 - lactate oxidation [Evidence IEA]
LutB/LldF family L-lactate oxidation iron-sulfur protein
COORDINATES: similar to AA sequence:RefSeq:WP_009514236.1
COORDINATES: protein motif:HMM:NF014598.2
GO:0009267 - cellular response to starvation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009513881.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362694.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007358925.1
pyrimidine/purine nucleoside phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_007361112.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363733.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363734.1
COORDINATES: protein motif:HMM:NF014425.2
GO:0000030 - mannosyltransferase activity [Evidence IEA]
GO:0006493 - protein O-linked glycosylation [Evidence IEA]
phospholipid carrier-dependent glycosyltransferase
COORDINATES: protein motif:HMM:NF013227.2
DegT/DnrJ/EryC1/StrS aminotransferase family protein
COORDINATES: protein motif:HMM:NF005414.0
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008872.0
bifunctional UDP-4-keto-pentose/UDP-xylose synthase
COORDINATES: similar to AA sequence:RefSeq:WP_007362104.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:NF013672.2
4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase
COORDINATES: protein motif:HMM:NF015684.2
COORDINATES: similar to AA sequence:RefSeq:WP_007361406.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361081.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012335.2
zinc-binding alcohol dehydrogenase family protein
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: protein motif:HMM:NF024579.2
COORDINATES: protein motif:HMM:TIGR03533.1
GO:0008276 - protein methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0042273 - ribosomal large subunit biogenesis [Evidence IEA]
50S ribosomal protein L3 N(5)-glutamine methyltransferase
COORDINATES: protein motif:HMM:NF015715.2
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF022748.2
COORDINATES: protein motif:HMM:NF015581.2
COORDINATES: protein motif:HMM:NF021485.2
COORDINATES: protein motif:HMM:NF018508.2
COORDINATES: similar to AA sequence:RefSeq:WP_012373749.1
COORDINATES: protein motif:HMM:NF014534.2
HPF/RaiA family ribosome-associated protein
COORDINATES: protein motif:HMM:NF012376.2
bifunctional UDP-sugar hydrolase/5'-nucleotidase
COORDINATES: protein motif:HMM:NF015558.2
putative sulfate exporter family transporter
COORDINATES: protein motif:HMM:NF012787.2
COORDINATES: protein motif:HMM:NF014386.2
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: protein motif:HMM:NF013791.2
COORDINATES: protein motif:HMM:NF012314.2
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF039355.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374290.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374562.1
molybdenum cofactor biosysynthesis protein
COORDINATES: protein motif:HMM:NF016064.2
YeeE/YedE thiosulfate transporter family protein
COORDINATES: protein motif:HMM:NF015851.2
COORDINATES: protein motif:HMM:NF024644.2
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF012602.2
COORDINATES: protein motif:HMM:NF015316.2
outer membrane protein transport protein
COORDINATES: similar to AA sequence:RefSeq:WP_012374281.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359447.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509894.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374293.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:TIGR03593.1
GO:0051205 - protein insertion into membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002474682.1
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:NF013022.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012374297.1
COORDINATES: protein motif:HMM:NF013933.2
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009509689.1
COORDINATES: protein motif:HMM:NF013250.2
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009510391.1
SprT family zinc-dependent metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_007358924.1
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: similar to AA sequence:RefSeq:WP_007360379.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024833.2
COORDINATES: protein motif:HMM:NF024436.2
COORDINATES: protein motif:HMM:NF018889.2
COORDINATES: similar to AA sequence:RefSeq:WP_009512061.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361710.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510423.1
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007361423.1
COORDINATES: protein motif:HMM:NF014517.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
nicotinamide-nucleotide amidohydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007361014.1
lipid-binding SYLF domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007361067.1
COORDINATES: protein motif:HMM:NF028272.2
putative ABC exporter domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007361450.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361665.1
COORDINATES: protein motif:HMM:NF015686.2
COORDINATES: similar to AA sequence:RefSeq:WP_009511546.1
COORDINATES: protein motif:HMM:NF024498.2
COORDINATES: similar to AA sequence:RefSeq:WP_009513593.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510077.1
COORDINATES: protein motif:HMM:NF025887.2
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009513599.1
COORDINATES: protein motif:HMM:TIGR02227.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00126.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012995.2
COORDINATES: protein motif:HMM:NF040763.1
NADH-dependent [FeFe] hydrogenase, group A6
COORDINATES: protein motif:HMM:NF013662.2
NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein
COORDINATES: protein motif:HMM:NF013426.2
COORDINATES: protein motif:HMM:NF001950.0
COORDINATES: similar to AA sequence:RefSeq:WP_012377217.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377216.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377215.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508817.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512573.1
COORDINATES: protein motif:HMM:NF022479.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359546.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009508773.1
COORDINATES: protein motif:HMM:NF013836.2
GO:0070569 - uridylyltransferase activity [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012374389.1
GO:0003933 - GTP cyclohydrolase activity [Evidence IEA]
GO:0035998 - 7,8-dihydroneopterin 3'-triphosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009513652.1
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:TIGR00696.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
GO:0043163 - cell envelope organization [Evidence IEA]
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009513702.1
COORDINATES: protein motif:HMM:TIGR01509.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009509620.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360499.1
COORDINATES: protein motif:HMM:NF004836.0
COORDINATES: protein motif:HMM:TIGR00654.1
PhzF family phenazine biosynthesis protein
COORDINATES: protein motif:HMM:NF023514.2
COORDINATES: similar to AA sequence:RefSeq:WP_009508790.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361821.1
GO:0015267 - channel activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008823.0
COORDINATES: protein motif:HMM:NF040501.1
arsenic resistance N-acetyltransferase ArsN2
COORDINATES: protein motif:HMM:TIGR02959.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508744.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508745.1
COORDINATES: protein motif:HMM:NF021589.2
COORDINATES: protein motif:HMM:NF014606.2
polysaccharide biosynthesis/export family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007360185.1
GO:0045226 - extracellular polysaccharide biosynthetic process [Evidence IEA]
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360183.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374422.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508054.1
GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
type II secretion system major pseudopilin GspG
COORDINATES: protein motif:HMM:NF023444.2
COORDINATES: protein motif:HMM:NF015867.2
COORDINATES: protein motif:HMM:NF023516.2
COORDINATES: protein motif:HMM:NF014477.2
COORDINATES: protein motif:HMM:NF025452.2
COORDINATES: similar to AA sequence:RefSeq:WP_007362799.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359134.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362800.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374444.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009513630.1
COORDINATES: protein motif:HMM:NF004490.0
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362219.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009514092.1
GO:0008612 - peptidyl-lysine modification to peptidyl-hypusine [Evidence IEA]
COORDINATES: protein motif:HMM:NF013328.2
DNA-formamidopyrimidine glycosylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007358797.1
COORDINATES: protein motif:HMM:NF016028.2
COORDINATES: similar to AA sequence:RefSeq:WP_012374085.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512111.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363740.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512112.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508236.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373786.1
COORDINATES: protein motif:HMM:NF018980.2
COORDINATES: similar to AA sequence:RefSeq:WP_009512283.1
COORDINATES: protein motif:HMM:NF024578.2
COORDINATES: protein motif:HMM:NF025227.2
COORDINATES: similar to AA sequence:RefSeq:WP_016110865.1
COORDINATES: protein motif:HMM:NF013799.2
ectonucleotide pyrophosphatase/phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_007360965.1
COORDINATES: protein motif:HMM:NF014470.2
twin-arginine translocase TatA/TatE family subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007363110.1
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: similar to AA sequence:RefSeq:WP_012374485.1
flotillin-like protein involved in membrane lipid rafts; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:NF024882.2
COORDINATES: similar to AA sequence:RefSeq:WP_009510096.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510416.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374491.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363393.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363394.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361798.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012374495.1
50S ribosomal protein L11 methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009510079.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007361618.1
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxyl carrier protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_009512650.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00546.1
GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
COORDINATES: protein motif:HMM:NF019350.2
COORDINATES: protein motif:HMM:NF004825.0
COORDINATES: similar to AA sequence:RefSeq:WP_007359126.1
COORDINATES: protein motif:HMM:TIGR01065.1
COORDINATES: protein motif:HMM:NF015060.2
COORDINATES: protein motif:HMM:NF005602.0
serine hydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF022605.2
COORDINATES: protein motif:HMM:NF019556.2
COORDINATES: similar to AA sequence:RefSeq:WP_009513678.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_009511997.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
3,4-dihydroxy-2-butanone-4-phosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_009508958.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359643.1
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_007359642.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:TIGR02141.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdate ABC transporter permease subunit
COORDINATES: protein motif:HMM:NF024921.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
molybdate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF016241.2
COORDINATES: protein motif:HMM:NF024298.2
COORDINATES: protein motif:HMM:NF012417.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359974.1
PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm; Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF016060.2
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007359737.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509703.1
COORDINATES: protein motif:HMM:TIGR02037.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507875.1
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007361374.1
PocR ligand-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009512511.1
COORDINATES: protein motif:HMM:NF024772.2
CmpA/NrtA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009512509.1
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009507552.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363616.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012374282.1
COORDINATES: protein motif:HMM:NF012870.2
COORDINATES: similar to AA sequence:RefSeq:WP_012375129.1
COORDINATES: protein motif:HMM:NF028476.2
COORDINATES: protein motif:HMM:NF013697.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: protein motif:HMM:NF014851.2
COORDINATES: protein motif:HMM:NF007940.0
COORDINATES: similar to AA sequence:RefSeq:WP_009508323.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009045 - xylose isomerase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:NF015999.2
COORDINATES: protein motif:HMM:NF000840.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nicotinate-nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:TIGR00090.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362775.1
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: similar to AA sequence:RefSeq:WP_009507800.1
COORDINATES: protein motif:HMM:TIGR04325.1
COORDINATES: protein motif:HMM:TIGR03025.1
COORDINATES: protein motif:HMM:TIGR00237.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00357.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: similar to AA sequence:RefSeq:WP_009510961.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361740.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361739.1
COORDINATES: protein motif:HMM:NF019430.2
GO:0042597 - periplasmic space [Evidence IEA]
Spy/CpxP family protein refolding chaperone
COORDINATES: protein motif:HMM:NF019265.2
COORDINATES: similar to AA sequence:RefSeq:WP_009509464.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360288.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509895.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510959.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509838.1
COORDINATES: protein motif:HMM:NF039847.1
COORDINATES: similar to AA sequence:RefSeq:WP_012372985.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375138.1
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: similar to AA sequence:RefSeq:WP_012374893.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507623.1
GO:0050304 - nitrous-oxide reductase activity [Evidence IEA]
GO:0019333 - denitrification pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009507622.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507621.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507620.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507619.1
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: protein motif:HMM:NF017464.2
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: protein motif:HMM:NF016150.2
COORDINATES: protein motif:HMM:NF006596.0
COORDINATES: protein motif:HMM:NF018449.2
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: protein motif:HMM:NF024076.2
COORDINATES: similar to AA sequence:RefSeq:WP_007364113.1
COORDINATES: protein motif:HMM:NF025716.2
COORDINATES: protein motif:HMM:NF036460.2
COORDINATES: protein motif:HMM:TIGR03433.1
N-acyl homoserine lactonase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007363854.1
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: protein motif:HMM:NF001381.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019829.2
PaaX family transcriptional regulator C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009509007.1
COORDINATES: protein motif:HMM:NF012427.2
COORDINATES: similar to AA sequence:RefSeq:WP_012374712.1
COORDINATES: protein motif:HMM:TIGR04076.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374813.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374714.1
COORDINATES: protein motif:HMM:NF024757.2
beta galactosidase jelly roll domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012374696.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374716.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374713.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374459.1
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009507584.1
COORDINATES: similar to AA sequence:RefSeq:WP_009514037.1
COORDINATES: similar to AA sequence:RefSeq:WP_009514043.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359534.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359535.1
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007360867.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007362777.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF019542.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363248.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508004.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374744.1
GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]
GO:0006729 - tetrahydrobiopterin biosynthetic process [Evidence IEA]
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_009508946.1
MTAP family purine nucleoside phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_009509440.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361176.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_009512716.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF027698.2
COORDINATES: protein motif:HMM:NF016876.2
COORDINATES: similar to AA sequence:RefSeq:WP_009508227.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507653.1
COORDINATES: similar to AA sequence:RefSeq:WP_012553267.1
GO:0004803 - transposase activity [Evidence IEA]
programmed frameshift; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009508307.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016983.2
COORDINATES: protein motif:HMM:TIGR01194.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:1904680 - peptide transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024808.2
spermidine/putrescine ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013166.2
COORDINATES: protein motif:HMM:NF015578.2
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:NF012901.2
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: protein motif:HMM:NF012873.2
COORDINATES: protein motif:HMM:NF003417.0
COORDINATES: protein motif:HMM:TIGR01733.1
amino acid adenylation domain-containing protein
COORDINATES: protein motif:HMM:NF006733.0
GO:0045303 - diaminobutyrate-2-oxoglutarate transaminase activity [Evidence IEA]
diaminobutyrate--2-oxoglutarate transaminase
COORDINATES: protein motif:HMM:NF013921.2
COORDINATES: similar to AA sequence:RefSeq:WP_009508379.1
GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014688.2
COORDINATES: similar to AA sequence:RefSeq:WP_009509875.1
COORDINATES: protein motif:HMM:NF012933.2
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360782.1
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007359532.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359533.1
COORDINATES: protein motif:HMM:NF023459.2
COORDINATES: similar to AA sequence:RefSeq:WP_007362731.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374703.1
GO:0009341 - beta-galactosidase complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012377322.1
COORDINATES: protein motif:HMM:NF025116.2
COORDINATES: similar to AA sequence:RefSeq:WP_009509306.1
COORDINATES: protein motif:HMM:TIGR01693.1
GO:0008773 - [protein-PII] uridylyltransferase activity [Evidence IEA]
GO:0018177 - protein uridylylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363514.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009509108.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362644.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02100.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02402.1
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
malto-oligosyltrehalose trehalohydrolase
COORDINATES: protein motif:HMM:TIGR02401.1
GO:0047470 - (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013801934.1
COORDINATES: similar to AA sequence:RefSeq:WP_007358681.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511881.1
branched-chain amino acid ABC transporter permease
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: similar to AA sequence:RefSeq:WP_007360456.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359961.1
COORDINATES: protein motif:HMM:NF015860.2
glycine zipper domain-containing protein
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009512522.1
quaternary ammonium compound efflux SMR transporter SugE
COORDINATES: similar to AA sequence:RefSeq:WP_007362921.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513468.1
GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007358850.1
acetyl-CoA carboxylase carboxyltransferase subunit alpha
COORDINATES: protein motif:HMM:NF012696.2
GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015957.2
COORDINATES: similar to AA sequence:RefSeq:WP_009509272.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512307.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363005.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: protein motif:HMM:NF013300.2
COORDINATES: protein motif:HMM:NF014269.2
LON peptidase substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF024742.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359922.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374873.1
COORDINATES: similar to AA sequence:RefSeq:WP_005920153.1
COORDINATES: protein motif:HMM:NF013129.2
COORDINATES: similar to AA sequence:RefSeq:WP_009513910.1
COORDINATES: protein motif:HMM:NF005932.1
COORDINATES: similar to AA sequence:RefSeq:WP_007364257.1
COORDINATES: protein motif:HMM:NF019042.2
COORDINATES: protein motif:HMM:NF008022.0
sulfate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF016817.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
succinylglutamate desuccinylase/aspartoacylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007364251.1
GO:0015419 - ABC-type sulfate transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
sulfate ABC transporter permease subunit CysT
COORDINATES: similar to AA sequence:RefSeq:WP_007364250.1
sulfate ABC transporter permease subunit CysW
COORDINATES: similar to AA sequence:RefSeq:WP_009512534.1
sulfate ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363414.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: protein motif:HMM:NF021214.2
COORDINATES: similar to AA sequence:RefSeq:WP_009508724.1
cytochrome C oxidase subunit IV family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009508723.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508722.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009508721.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374623.1
COORDINATES: similar to AA sequence:RefSeq:WP_007358916.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374895.1
GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO:0006783 - heme biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009508189.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
GO:0006784 - heme A biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362812.1
GO:0008714 - AMP nucleosidase activity [Evidence IEA]
GO:0044209 - AMP salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009510526.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF010925.0
GO:0033819 - lipoyl(octanoyl) transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009509892.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511234.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360880.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511232.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511160.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511158.1
GO:0008915 - lipid-A-disaccharide synthase activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009508769.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009508768.1
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363234.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511878.1
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF004226.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359530.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508759.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359528.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360411.1
GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360410.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360409.1
COORDINATES: similar to AA sequence:RefSeq:WP_007358795.1
COORDINATES: protein motif:HMM:TIGR01007.1
COORDINATES: similar to AA sequence:RefSeq:WP_016291321.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511720.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511994.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009512758.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009512756.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01356.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009508654.1
GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
prephenate dehydrogenase/arogenate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007360503.1
COORDINATES: protein motif:HMM:NF014047.2
COORDINATES: protein motif:HMM:NF012671.2
COORDINATES: protein motif:HMM:NF015722.2
SUMF1/EgtB/PvdO family nonheme iron enzyme
COORDINATES: protein motif:HMM:NF024930.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359581.1
COORDINATES: similar to AA sequence:RefSeq:WP_012376024.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012961.2
GDSL-type esterase/lipase family protein
COORDINATES: protein motif:HMM:NF001862.0
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01950.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
redox-sensitive transcriptional activator SoxR
COORDINATES: protein motif:HMM:NF023520.2
COORDINATES: protein motif:HMM:NF024864.2
cupredoxin family copper-binding protein
COORDINATES: protein motif:HMM:NF015948.2
COORDINATES: protein motif:HMM:NF021778.2
COORDINATES: protein motif:HMM:NF013398.2
COORDINATES: protein motif:HMM:NF015961.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359531.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507605.1
COORDINATES: protein motif:HMM:NF024600.2
GO:0005509 - calcium ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF007388.0
GO:0047834 - D-threo-aldose 1-dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00557.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: protein motif:HMM:NF018682.2
four-carbon acid sugar kinase family protein
COORDINATES: protein motif:HMM:NF015751.2
COORDINATES: protein motif:HMM:TIGR00369.1
COORDINATES: protein motif:HMM:NF036531.2
GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019260.2
COORDINATES: protein motif:HMM:NF022812.2
COORDINATES: protein motif:HMM:NF019121.2
COORDINATES: protein motif:HMM:NF020037.2
COORDINATES: protein motif:HMM:NF005091.0
COORDINATES: protein motif:HMM:NF024765.2
COORDINATES: protein motif:HMM:TIGR03696.1
RHS repeat-associated core domain-containing protein
COORDINATES: protein motif:HMM:NF014021.2
COORDINATES: protein motif:HMM:NF001299.0
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000210 - NAD+ diphosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024092.2
COORDINATES: protein motif:HMM:TIGR00937.1
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016837.2
COORDINATES: protein motif:HMM:NF025004.2
gluconate 2-dehydrogenase subunit 3 family protein
COORDINATES: protein motif:HMM:NF012935.2
COORDINATES: protein motif:HMM:NF025890.2
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: similar to AA sequence:RefSeq:WP_007364092.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510054.1
COORDINATES: protein motif:HMM:NF014500.2
COORDINATES: protein motif:HMM:NF014026.2
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362127.1
LLM class flavin-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF016154.2
COORDINATES: protein motif:HMM:NF024829.2
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: protein motif:HMM:NF020844.2
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0016837 - carbon-oxygen lyase activity, acting on polysaccharides [Evidence IEA]
rhamnogalacturonan lyase B N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF038032.1
GO:0071586 - CAAX-box protein processing [Evidence IEA]
CPBP family glutamic-type intramembrane protease
COORDINATES: protein motif:HMM:NF015530.2
COORDINATES: protein motif:HMM:NF013228.2
COORDINATES: protein motif:HMM:TIGR00711.1
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
DHA2 family efflux MFS transporter permease subunit
COORDINATES: protein motif:HMM:NF012739.2
COORDINATES: protein motif:HMM:NF028169.2
COORDINATES: protein motif:HMM:NF015587.2
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009508522.1
COORDINATES: protein motif:HMM:NF023149.2
GO:0030246 - carbohydrate binding [Evidence IEA]
malectin domain-containing carbohydrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016290911.1
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012375209.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361231.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0003955 - NAD(P)H dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004976.0
COORDINATES: similar to AA sequence:RefSeq:WP_016399403.1
COORDINATES: protein motif:HMM:NF012697.2
COORDINATES: protein motif:HMM:TIGR02228.1
COORDINATES: protein motif:HMM:NF013691.2
COORDINATES: protein motif:HMM:NF024783.2
HNH endonuclease signature motif containing protein
COORDINATES: protein motif:HMM:NF015210.2
COORDINATES: protein motif:HMM:NF013100.2
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: protein motif:HMM:NF012695.2
COORDINATES: similar to AA sequence:RefSeq:WP_007361893.1
COORDINATES: protein motif:HMM:NF024853.2
vitamin K epoxide reductase family protein
COORDINATES: protein motif:HMM:NF020768.2
GO:0031221 - arabinan metabolic process [Evidence IEA]
arabinofuranosidase catalytic domain-containing protein
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018748.2
COORDINATES: protein motif:HMM:NF013438.2
COORDINATES: protein motif:HMM:NF022636.2
COORDINATES: protein motif:HMM:NF013595.2
COORDINATES: protein motif:HMM:NF019242.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363902.1
COORDINATES: protein motif:HMM:NF016152.2
COORDINATES: protein motif:HMM:NF027610.2
COORDINATES: protein motif:HMM:NF019229.2
COORDINATES: protein motif:HMM:NF024827.2
COORDINATES: similar to AA sequence:RefSeq:WP_007362633.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508468.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363619.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509324.1
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359990.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359989.1
COORDINATES: protein motif:HMM:TIGR00621.2
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF021255.2
COORDINATES: protein motif:HMM:NF024700.2
COORDINATES: protein motif:HMM:TIGR04474.1
COORDINATES: protein motif:HMM:NF015983.2
COORDINATES: protein motif:HMM:TIGR00498.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363232.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360076.1
COORDINATES: protein motif:HMM:NF018877.2
COORDINATES: similar to AA sequence:RefSeq:WP_012374565.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359676.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513705.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374616.1
COORDINATES: protein motif:HMM:NF015168.2
COORDINATES: similar to AA sequence:RefSeq:WP_012375148.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375147.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359987.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360631.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03303.1
GO:0009279 - cell outer membrane [Evidence IEA]
outer membrane protein assembly factor BamA
COORDINATES: similar to AA sequence:RefSeq:WP_007360629.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363875.1
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012374079.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512289.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007364234.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363662.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510138.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361575.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362004.1
COORDINATES: protein motif:HMM:TIGR01498.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: protein motif:HMM:NF014233.2
GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013007.2
COORDINATES: protein motif:HMM:NF012640.2
anthranilate synthase component I family protein
COORDINATES: protein motif:HMM:NF013247.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359927.1
folylpolyglutamate synthase/dihydrofolate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007359138.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375174.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359136.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_009513035.1
COORDINATES: protein motif:HMM:TIGR00472.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375178.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_007359132.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_012375180.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_009508956.1
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: similar to AA sequence:RefSeq:WP_007360552.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513553.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361279.1
COORDINATES: similar to AA sequence:RefSeq:WP_009514456.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361011.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510992.1
COORDINATES: protein motif:HMM:NF014678.2
COORDINATES: similar to AA sequence:RefSeq:WP_007361110.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361111.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359977.1
COORDINATES: protein motif:HMM:NF025729.2
COORDINATES: protein motif:HMM:NF016000.2
COORDINATES: similar to AA sequence:RefSeq:WP_009512429.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
GO:0070475 - rRNA base methylation [Evidence IEA]
23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ
COORDINATES: similar to AA sequence:RefSeq:WP_007361097.1
COORDINATES: similar to AA sequence:RefSeq:WP_009514451.1
GO:0047429 - nucleoside triphosphate diphosphatase activity [Evidence IEA]
GO:0009143 - nucleoside triphosphate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF006932.0
COORDINATES: similar to AA sequence:RefSeq:WP_009509054.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007364147.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375051.1
COORDINATES: protein motif:HMM:NF015047.2
COORDINATES: protein motif:HMM:NF024973.2
COORDINATES: similar to AA sequence:RefSeq:WP_007360489.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360488.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360487.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360486.1
peptide chain release factor-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_007362149.1
COORDINATES: protein motif:HMM:NF015438.2
MOSC N-terminal beta barrel domain-containing protein
COORDINATES: protein motif:HMM:TIGR03067.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512808.1
COORDINATES: protein motif:HMM:NF012337.2
beta-ketoacyl synthase N-terminal-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007362737.1
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_009511877.1
GO:0008254 - 3'-nucleotidase activity [Evidence IEA]; GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF039587.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375233.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363237.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509612.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509127.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509128.1
COORDINATES: protein motif:HMM:NF024220.2
COORDINATES: similar to AA sequence:RefSeq:WP_012374211.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362339.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363964.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511518.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012376745.1
GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
GO:0019419 - sulfate reduction [Evidence IEA]
sulfate adenylyltransferase subunit CysD
COORDINATES: protein motif:HMM:NF013658.2
phosphoadenosine phosphosulfate reductase family protein
COORDINATES: protein motif:HMM:NF010029.0
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0004783 - sulfite reductase (NADPH) activity [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
NADPH-dependent assimilatory sulfite reductase hemoprotein subunit
COORDINATES: protein motif:HMM:NF004790.0
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: protein motif:HMM:NF014016.2
GO:0016829 - lyase activity [Evidence IEA]
CbiX/SirB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012375255.1
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_012375252.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507830.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_007358904.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375258.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360841.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_009511361.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: protein motif:HMM:NF024587.2
COORDINATES: protein motif:HMM:NF012413.2
GO:0004146 - dihydrofolate reductase activity [Evidence IEA]
GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF023899.2
COORDINATES: protein motif:HMM:TIGR00518.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359128.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375267.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007360430.1
crossover junction endodeoxyribonuclease RuvC
COORDINATES: protein motif:HMM:TIGR00815.1
GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360068.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509383.1
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009509384.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509385.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509387.1
COORDINATES: protein motif:HMM:NF005086.0
COORDINATES: protein motif:HMM:NF012581.2
COORDINATES: protein motif:HMM:NF012566.2
COORDINATES: protein motif:HMM:NF013242.2
COORDINATES: similar to AA sequence:RefSeq:WP_009509388.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509390.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375287.1
GO:0004325 - ferrochelatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360842.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_012375292.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009513937.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362529.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359560.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359267.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012375302.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363709.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360408.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359123.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006222 - UMP biosynthetic process [Evidence IEA]
quinone-dependent dihydroorotate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012376178.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362692.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375370.1
COORDINATES: protein motif:HMM:NF025658.2
COORDINATES: similar to AA sequence:RefSeq:WP_009512381.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507596.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: similar to AA sequence:RefSeq:WP_007363564.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361799.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375329.1
GO:0016597 - amino acid binding [Evidence IEA]; GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0006520 - amino acid metabolic process [Evidence IEA]
aspartate carbamoyltransferase catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007361801.1
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR
COORDINATES: similar to AA sequence:RefSeq:WP_009513199.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
helicase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF016270.2
COORDINATES: similar to AA sequence:RefSeq:WP_009511765.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF013923.2
COORDINATES: protein motif:HMM:NF014758.2
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: protein motif:HMM:NF013134.2
COORDINATES: protein motif:HMM:NF019317.2
COORDINATES: similar to AA sequence:RefSeq:WP_009511770.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362854.1
COORDINATES: protein motif:HMM:NF005589.0
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009512408.1
3-deoxy-D-manno-octulosonic acid transferase
COORDINATES: protein motif:HMM:NF015735.2
COORDINATES: protein motif:HMM:NF019843.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359879.1
COORDINATES: protein motif:HMM:NF018613.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363397.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360120.1
COORDINATES: protein motif:HMM:NF002505.0
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
ClcB-like voltage-gated chloride channel protein
COORDINATES: similar to AA sequence:RefSeq:WP_009509346.1
phosphate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009509345.1
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_007360026.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509343.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:TIGR02135.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_007362734.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375316.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375317.1
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359962.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375373.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012375375.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:NF024545.2
COORDINATES: similar to AA sequence:RefSeq:WP_007360597.1
COORDINATES: protein motif:HMM:NF025597.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359323.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363140.1
COORDINATES: protein motif:HMM:NF039701.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509341.1
class I SAM-dependent rRNA methyltransferase
COORDINATES: protein motif:HMM:NF007756.0
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360291.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361802.1
GO:0016836 - hydro-lyase activity [Evidence IEA]; GO:0008759 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]; GO:0009245 - lipid A biosynthetic process [Evidence IEA]
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_007361803.1
GO:0008780 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence IEA]
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009509948.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007361745.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511257.1
COORDINATES: protein motif:HMM:NF021235.2
COORDINATES: protein motif:HMM:NF015237.2
COORDINATES: protein motif:HMM:NF012264.2
COORDINATES: similar to AA sequence:RefSeq:WP_012375638.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375637.1
COORDINATES: protein motif:HMM:NF010478.0
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: protein motif:HMM:TIGR03999.1
GO:0071793 - bacillithiol biosynthetic process [Evidence IEA]
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA
COORDINATES: protein motif:HMM:NF014625.2
COORDINATES: protein motif:HMM:NF022588.2
COORDINATES: protein motif:HMM:NF012383.2
phosphoribosyltransferase family protein
saccharopine dehydrogenase NADP-binding domain-containing protein
COORDINATES: protein motif:HMM:NF020036.2
COORDINATES: similar to AA sequence:RefSeq:WP_009513263.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513264.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_007363041.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363040.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_009513267.1
GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_012375448.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: similar to AA sequence:RefSeq:WP_007363037.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_007363035.1
putative peptidoglycan glycosyltransferase FtsW
COORDINATES: protein motif:HMM:NF016027.2
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
COORDINATES: similar to AA sequence:RefSeq:WP_007363033.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363032.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF020067.2
FtsQ-type POTRA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007363030.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009513275.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009511612.1
COORDINATES: protein motif:HMM:NF012334.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_009511615.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511212.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375462.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0043039 - tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024247.2
COORDINATES: similar to AA sequence:RefSeq:WP_009511151.1
GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360913.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363931.1
iron-sulfur cluster insertion protein ErpA
COORDINATES: similar to AA sequence:RefSeq:WP_009508477.1
GO:0052624 - 2-phytyl-1,4-naphthoquinone methyltransferase activity [Evidence IEA]
GO:0042372 - phylloquinone biosynthetic process [Evidence IEA]
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
COORDINATES: similar to AA sequence:RefSeq:WP_007358621.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375471.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF004064.0
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: protein motif:HMM:NF005394.0
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF027589.2
COORDINATES: similar to AA sequence:RefSeq:WP_012375739.1
GO:0008743 - L-threonine 3-dehydrogenase activity [Evidence IEA]
GO:0006567 - threonine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013222.2
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007361109.1
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012375480.1
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015406.2
COORDINATES: protein motif:HMM:TIGR01777.1
COORDINATES: similar to AA sequence:RefSeq:WP_007364082.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03432.1
COORDINATES: protein motif:HMM:NF013706.2
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:NF011446.0
putative manganese-dependent inorganic diphosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_009511048.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507826.1
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363442.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363441.1
GO:0016301 - kinase activity [Evidence IEA]
GO:0046314 - phosphocreatine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363440.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009509318.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375496.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009509317.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007362220.1
diacylglycerol kinase family lipid kinase
COORDINATES: similar to AA sequence:RefSeq:WP_012375499.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360501.1
COORDINATES: protein motif:HMM:NF006757.0
COORDINATES: similar to AA sequence:RefSeq:WP_007359559.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508475.1
COORDINATES: similar to AA sequence:RefSeq:WP_007358915.1
COORDINATES: protein motif:HMM:TIGR00077.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:NF013427.2
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362683.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360464.1
GO:0004729 - oxygen-dependent protoporphyrinogen oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009511874.1
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009508229.1
GO:0004109 - coproporphyrinogen oxidase activity [Evidence IEA]
oxygen-dependent coproporphyrinogen oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_009508982.1
COORDINATES: protein motif:HMM:NF012970.2
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: protein motif:HMM:NF024769.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363423.1
COORDINATES: protein motif:HMM:NF022137.2
COORDINATES: similar to AA sequence:RefSeq:WP_007362822.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024206.2
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007360594.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363665.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512631.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363008.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009509479.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359050.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509478.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363659.1
COORDINATES: protein motif:HMM:TIGR00191.1
GO:0004413 - homoserine kinase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362691.1
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF013257.2
COORDINATES: protein motif:HMM:NF015251.2
lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007360482.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360012.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360009.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360008.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513581.1
COORDINATES: protein motif:HMM:NF028519.2
COORDINATES: protein motif:HMM:NF024353.2
COORDINATES: similar to AA sequence:RefSeq:WP_007358673.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012375555.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359063.1
ATP-dependent Clp protease proteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007360912.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_012375128.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363203.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363142.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_007360595.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508688.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0032508 - DNA duplex unwinding [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
COORDINATES: protein motif:HMM:NF024968.2
COORDINATES: similar to AA sequence:RefSeq:WP_012376074.1
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: protein motif:HMM:NF016377.2
COORDINATES: protein motif:HMM:NF021616.2
COORDINATES: similar to AA sequence:RefSeq:WP_015703970.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: similar to AA sequence:RefSeq:WP_009508709.1
polysaccharide ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:NF017345.2
FdtA/QdtA family cupin domain-containing protein
COORDINATES: protein motif:HMM:TIGR01383.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359748.1
COORDINATES: similar to AA sequence:RefSeq:WP_007358861.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_009508237.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360414.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360413.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363938.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513469.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513470.1
COORDINATES: similar to AA sequence:RefSeq:WP_007364322.1
COORDINATES: similar to AA sequence:RefSeq:WP_007364321.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512627.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360364.1
GO:0004042 - acetyl-CoA:L-glutamate N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009514017.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362465.1
GO:0030163 - protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362464.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
COORDINATES: similar to AA sequence:RefSeq:WP_007359406.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
DNA polymerase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012375937.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513533.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359600.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361087.1
COORDINATES: protein motif:HMM:NF005660.0
COORDINATES: similar to AA sequence:RefSeq:WP_009509295.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509294.1
helix-hairpin-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007363860.1
COORDINATES: similar to AA sequence:RefSeq:WP_009514117.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362191.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375631.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009514568.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375633.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009514541.1
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
GO:0006747 - FAD biosynthetic process [Evidence IEA]; GO:0009398 - FMN biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009513675.1
COORDINATES: protein motif:HMM:NF018038.2
COORDINATES: similar to AA sequence:RefSeq:WP_012377191.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375404.1
COORDINATES: protein motif:HMM:NF019095.2
COORDINATES: protein motif:HMM:TIGR00370.1
COORDINATES: protein motif:HMM:TIGR00724.1
biotin-dependent carboxyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007362870.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375644.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_007363411.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507850.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF001208.0
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362493.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007358603.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007358604.1
COORDINATES: similar to AA sequence:RefSeq:WP_007358606.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009507832.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507833.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007361599.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_007360245.1
GO:0045254 - pyruvate dehydrogenase complex [Evidence IEA]
GO:0004742 - dihydrolipoyllysine-residue acetyltransferase activity [Evidence IEA]; GO:0004738 - pyruvate dehydrogenase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007360244.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_007360243.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_007360242.1
COORDINATES: protein motif:HMM:NF022554.2
COORDINATES: protein motif:HMM:NF038287.1
type II and III secretion system protein
COORDINATES: similar to AA sequence:RefSeq:WP_007360343.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
5'-3' exonuclease H3TH domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007363245.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363244.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508007.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360346.1
COORDINATES: protein motif:HMM:NF024895.2
COORDINATES: protein motif:HMM:NF019239.2
COORDINATES: protein motif:HMM:NF012699.2
COORDINATES: similar to AA sequence:RefSeq:WP_009509143.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507604.1
COORDINATES: protein motif:HMM:NF012343.2
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_007363542.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375398.1
COORDINATES: protein motif:HMM:TIGR01417.1
COORDINATES: protein motif:HMM:NF015213.2
GO:0033573 - high-affinity iron permease complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0005381 - iron ion transmembrane transporter activity [Evidence IEA]
GO:0034755 - iron ion transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359220.1
COORDINATES: protein motif:HMM:NF013237.2
PLP-dependent aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009511673.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363427.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361068.1
COORDINATES: protein motif:HMM:NF013381.2
uroporphyrinogen decarboxylase family protein
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF019552.2
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:NF027541.2
GxGYxYP family putative glycoside hydrolase
COORDINATES: protein motif:HMM:NF024770.2
COORDINATES: protein motif:HMM:NF036578.2
alpha-L-rhamnosidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF025465.2
COORDINATES: protein motif:HMM:NF025867.2
COORDINATES: protein motif:HMM:NF013696.2
COORDINATES: similar to AA sequence:RefSeq:WP_009507893.1
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012375477.1
COORDINATES: protein motif:HMM:NF013731.2
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF013867.2
COORDINATES: protein motif:HMM:NF001965.0
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
chemotaxis-specific protein-glutamate methyltransferase CheB
COORDINATES: protein motif:HMM:NF023273.2
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: protein motif:HMM:NF024850.2
COORDINATES: protein motif:HMM:NF014312.2
COORDINATES: protein motif:HMM:NF037276.2
COORDINATES: protein motif:HMM:NF012936.2
COORDINATES: protein motif:HMM:TIGR01003.1
COORDINATES: protein motif:HMM:NF014620.2
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012377226.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508422.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
CusA/CzcA family heavy metal efflux RND transporter
COORDINATES: similar to AA sequence:RefSeq:WP_004220743.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0004560 - alpha-L-fucosidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF039786.1
COORDINATES: protein motif:HMM:TIGR03297.1
GO:0033980 - phosphonopyruvate decarboxylase activity [Evidence IEA]
GO:0017000 - antibiotic biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009511796.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510710.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360510.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360155.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513121.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009508756.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012375803.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375802.1
COORDINATES: protein motif:HMM:NF012340.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359498.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009511995.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360326.1
alanine--glyoxylate aminotransferase family protein
COORDINATES: protein motif:HMM:NF014645.2
GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363531.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375813.1
COORDINATES: protein motif:HMM:NF037510.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025574.2
COORDINATES: protein motif:HMM:NF014442.2
class I SAM-dependent DNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009513680.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511532.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360693.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009511453.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360779.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359566.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513291.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009513246.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363065.1
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360351.1
COORDINATES: protein motif:HMM:NF015682.2
demethylmenaquinone methyltransferase-like protein
COORDINATES: protein motif:HMM:NF003640.0
COORDINATES: protein motif:HMM:TIGR03118.1
COORDINATES: protein motif:HMM:NF015049.2
COORDINATES: protein motif:HMM:NF013206.2
COORDINATES: protein motif:HMM:NF022172.2
COORDINATES: protein motif:HMM:NF012863.2
COORDINATES: protein motif:HMM:NF033749.1
COORDINATES: protein motif:HMM:NF024777.2
COORDINATES: protein motif:HMM:NF024603.2
COORDINATES: protein motif:HMM:NF022019.2
COORDINATES: protein motif:HMM:NF012861.2
COORDINATES: similar to AA sequence:RefSeq:WP_012373668.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360949.1
COORDINATES: similar to AA sequence:RefSeq:WP_007358742.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_009508405.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00767.1
COORDINATES: similar to AA sequence:RefSeq:WP_007358650.1
COORDINATES: similar to AA sequence:RefSeq:WP_007358651.1
type IV pilus twitching motility protein PilT
COORDINATES: similar to AA sequence:RefSeq:WP_007358652.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508398.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511692.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513490.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362792.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511683.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362789.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509313.1
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00181.1
COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510698.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375908.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360293.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_005590628.1
COORDINATES: protein motif:HMM:NF016107.2
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: protein motif:HMM:NF038084.1
COORDINATES: protein motif:HMM:TIGR00976.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377077.1
COORDINATES: protein motif:HMM:NF021640.2
COORDINATES: similar to AA sequence:RefSeq:WP_007362796.1
GO:0043714 - (R)-citramalate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017353.2
COORDINATES: similar to AA sequence:RefSeq:WP_009512438.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360511.1
GO:0008935 - 1,4-dihydroxy-2-naphthoyl-CoA synthase activity [Evidence IEA]
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009510816.1
COORDINATES: protein motif:HMM:NF016701.2
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: similar to AA sequence:RefSeq:WP_012375619.1
COORDINATES: protein motif:HMM:NF026221.2
beta-galactosidase trimerization domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009508783.1
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012376533.1
COORDINATES: protein motif:HMM:NF007214.0
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018058.2
COORDINATES: protein motif:HMM:NF018435.2
COORDINATES: similar to AA sequence:RefSeq:WP_012375949.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375950.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360333.1
COORDINATES: protein motif:HMM:NF022750.2
COORDINATES: protein motif:HMM:NF020083.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012375957.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508984.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359689.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375972.1
COORDINATES: protein motif:HMM:TIGR02989.1
COORDINATES: protein motif:HMM:NF024865.2
COORDINATES: protein motif:HMM:NF015155.2
COORDINATES: protein motif:HMM:NF026220.2
COORDINATES: protein motif:HMM:NF018716.2
COORDINATES: protein motif:HMM:NF018662.2
COORDINATES: protein motif:HMM:TIGR00630.1
COORDINATES: protein motif:HMM:NF023165.2
COORDINATES: similar to AA sequence:RefSeq:WP_009511743.1
COORDINATES: protein motif:HMM:NF025426.2
COORDINATES: similar to AA sequence:RefSeq:WP_012375984.1
COORDINATES: similar to AA sequence:RefSeq:WP_007358979.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363929.1
COORDINATES: protein motif:HMM:TIGR03708.1
GO:0043751 - polyphosphate:AMP phosphotransferase activity [Evidence IEA]
GO:0006797 - polyphosphate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024157.2
COORDINATES: similar to AA sequence:RefSeq:WP_009513029.1
COORDINATES: protein motif:HMM:NF016279.2
COORDINATES: similar to AA sequence:RefSeq:WP_009507848.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_009509055.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508859.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362730.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363202.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375998.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_009513119.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_007360151.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_007360152.1
GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007361092.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016291381.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362708.1
COORDINATES: protein motif:HMM:NF016885.2
COORDINATES: similar to AA sequence:RefSeq:WP_012377108.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374942.1
COORDINATES: protein motif:HMM:NF013239.2
COORDINATES: protein motif:HMM:NF012363.2
COORDINATES: similar to AA sequence:RefSeq:WP_012377120.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507486.1
GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015774 - polysaccharide transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009507511.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507509.1
COORDINATES: protein motif:HMM:NF014536.2
COORDINATES: similar to AA sequence:RefSeq:WP_009507501.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507498.1
COORDINATES: protein motif:HMM:NF016464.2
COORDINATES: similar to AA sequence:RefSeq:WP_009507497.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507496.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507494.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377148.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375565.1
COORDINATES: protein motif:HMM:NF007640.0
COORDINATES: protein motif:HMM:NF024303.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359380.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508096.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511495.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360748.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511493.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360750.1
3-hydroxyacyl-ACP dehydratase FabZ family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007359943.1
COORDINATES: protein motif:HMM:NF025392.2
COORDINATES: protein motif:HMM:NF037660.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363862.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363863.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363864.1
beta-ketoacyl-[acyl-carrier-protein] synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009507482.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510662.1
COORDINATES: protein motif:HMM:NF020039.2
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009513113.1
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: similar to AA sequence:RefSeq:WP_009513220.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00379
cyclic di-AMP (ydaO/yuaA leader) riboswitch senses the signaling molecule cyclic di-AMP; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012375924.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359127.1
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: protein motif:HMM:NF006944.0
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004494 - methylmalonyl-CoA mutase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013781.2
GO:0016866 - intramolecular transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359169.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359170.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513001.1
GO:0008948 - oxaloacetate decarboxylase activity [Evidence IEA]; GO:0015081 - sodium ion transmembrane transporter activity [Evidence IEA]
GO:0036376 - sodium ion export across plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359172.1
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007359174.1
GO:0006814 - sodium ion transport [Evidence IEA]
sodium ion-translocating decarboxylase subunit beta
COORDINATES: protein motif:HMM:NF016187.2
COORDINATES: protein motif:HMM:NF015910.2
COORDINATES: similar to AA sequence:RefSeq:WP_009512997.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359177.1
COORDINATES: similar to AA sequence:RefSeq:WP_009514424.1
COORDINATES: protein motif:HMM:NF012804.2
COORDINATES: similar to AA sequence:RefSeq:WP_009511927.1
sugar ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF024503.2
COORDINATES: protein motif:HMM:NF014525.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359070.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359219.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359218.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359217.1
COORDINATES: protein motif:HMM:NF012926.2
COORDINATES: protein motif:HMM:NF012516.2
GO:0004650 - polygalacturonase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022623.2
COORDINATES: protein motif:HMM:NF014430.2
COORDINATES: protein motif:HMM:NF019247.2
COORDINATES: similar to AA sequence:RefSeq:WP_007364094.1
COORDINATES: similar to AA sequence:RefSeq:WP_007364095.1
COORDINATES: protein motif:HMM:NF005559.1
COORDINATES: protein motif:HMM:NF024257.2
COORDINATES: protein motif:HMM:NF019268.2
COORDINATES: similar to AA sequence:RefSeq:WP_012373198.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512207.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363903.1
COORDINATES: similar to AA sequence:RefSeq:WP_012376169.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360627.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: protein motif:HMM:TIGR00544.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_007359743.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359742.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_007359741.1
GO:0004049 - anthranilate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009514460.1
COORDINATES: protein motif:HMM:NF028438.2
COORDINATES: similar to AA sequence:RefSeq:WP_012376040.1
COORDINATES: similar to AA sequence:RefSeq:WP_012375312.1
COORDINATES: protein motif:HMM:NF024784.2
COORDINATES: protein motif:HMM:NF019000.2
host-nuclease inhibitor Gam family protein
COORDINATES: protein motif:HMM:NF024793.2
COORDINATES: protein motif:HMM:NF015211.2
COORDINATES: protein motif:HMM:NF017850.2
COORDINATES: protein motif:HMM:NF013311.2
COORDINATES: similar to AA sequence:RefSeq:WP_007362102.1
COORDINATES: protein motif:HMM:NF017451.2
COORDINATES: protein motif:HMM:NF019884.2
COORDINATES: similar to AA sequence:RefSeq:WP_007362532.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:WP_007362533.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362534.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362535.1
GO:0008792 - arginine decarboxylase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009510104.1
four-helix bundle copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007360830.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Ada metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009511363.1
COORDINATES: protein motif:HMM:NF015908.2
COORDINATES: similar to AA sequence:RefSeq:WP_007362938.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513461.1
COORDINATES: protein motif:HMM:NF014641.2
COORDINATES: similar to AA sequence:RefSeq:WP_007364126.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00465.1
GO:0004455 - ketol-acid reductoisomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013113.2
COORDINATES: similar to AA sequence:RefSeq:WP_007364127.1
COORDINATES: protein motif:HMM:TIGR00119.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359250.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359249.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510727.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009508750.1
COORDINATES: protein motif:HMM:NF025053.2
protein phosphatase 2C domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009508080.1
COORDINATES: protein motif:HMM:NF016206.2
COORDINATES: protein motif:HMM:NF013283.2
COORDINATES: protein motif:HMM:NF016260.2
translocation/assembly module TamB domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009512901.1
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360436.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007360435.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360434.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363147.1
COORDINATES: protein motif:HMM:NF012956.2
COORDINATES: protein motif:HMM:TIGR03663.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509310.1
GO:0004795 - threonine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359969.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009509312.1
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_007359972.1
GO:0004617 - phosphoglycerate dehydrogenase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007364263.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360639.1
GO:0008832 - dGTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362696.1
COORDINATES: similar to AA sequence:RefSeq:WP_012376332.1
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_009509285.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359930.1
COORDINATES: similar to AA sequence:RefSeq:WP_012376336.1
COORDINATES: protein motif:HMM:NF004281.0
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
molybdopterin-synthase adenylyltransferase MoeB
COORDINATES: similar to AA sequence:RefSeq:WP_009511922.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359260.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508754.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359525.1
COORDINATES: protein motif:HMM:TIGR02866.1
COORDINATES: protein motif:HMM:TIGR02891.1
COORDINATES: protein motif:HMM:NF012575.2
ubiquinol-cytochrome c reductase iron-sulfur subunit
COORDINATES: protein motif:HMM:NF012263.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
cytochrome b N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007361340.1
COORDINATES: protein motif:HMM:NF037982.1
COORDINATES: similar to AA sequence:RefSeq:WP_012376353.1
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: protein motif:HMM:NF017400.2
SpoIVB peptidase S55 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009512001.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360320.1
COORDINATES: similar to AA sequence:RefSeq:WP_012376360.1
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: similar to AA sequence:RefSeq:WP_012376361.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_007359563.1
B12-binding domain-containing radical SAM protein
COORDINATES: similar to AA sequence:RefSeq:WP_009508476.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004856 - xylulokinase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0005997 - xylulose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007361553.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361554.1
COORDINATES: protein motif:HMM:NF020650.2
COORDINATES: similar to AA sequence:RefSeq:WP_007364132.1
COORDINATES: protein motif:HMM:NF020804.2
small ribosomal subunit Rsm22 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007361296.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: protein motif:HMM:NF024758.2
COORDINATES: similar to AA sequence:RefSeq:WP_007364191.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512202.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510136.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361582.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510118.1
adenine deaminase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: protein motif:HMM:NF001923.0
metal-dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF024946.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363432.1
COORDINATES: protein motif:HMM:NF012907.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359480.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359481.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014703.2
COORDINATES: similar to AA sequence:RefSeq:WP_012376405.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360254.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009513238.1
COORDINATES: protein motif:HMM:TIGR03302.1
GO:0065003 - protein-containing complex assembly [Evidence IEA]
outer membrane protein assembly factor BamD
COORDINATES: protein motif:HMM:NF016290.2
GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359448.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016847.2
COORDINATES: protein motif:HMM:NF020397.2
COORDINATES: similar to AA sequence:RefSeq:WP_009512505.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512507.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363239.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363074.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009508976.1
COORDINATES: protein motif:HMM:TIGR00031.1
GO:0008767 - UDP-galactopyranose mutase activity [Evidence IEA]
GO:0009273 - peptidoglycan-based cell wall biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF012457.2
COORDINATES: similar to AA sequence:RefSeq:WP_009512141.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512914.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362726.1
COORDINATES: protein motif:HMM:TIGR00105.1
COORDINATES: similar to AA sequence:RefSeq:WP_012376436.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508103.1
COORDINATES: similar to AA sequence:RefSeq:WP_007364231.1
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360111.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359935.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: similar to AA sequence:RefSeq:WP_007359934.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014417.2
transcription termination/antitermination NusG family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007359932.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509287.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012376448.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009513691.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362657.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512411.1
GO:0070204 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase activity [Evidence IEA]
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009509437.1
GO:0008909 - isochorismate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360131.1
COORDINATES: similar to AA sequence:RefSeq:WP_012376458.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_012376459.1
non-canonical purine NTP pyrophosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_007363072.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: similar to AA sequence:RefSeq:WP_009511057.1
COORDINATES: protein motif:HMM:NF019413.2
COORDINATES: protein motif:HMM:NF012407.2
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01561.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373872.1
COORDINATES: protein motif:HMM:TIGR01778.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]
GO:0006825 - copper ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362566.1
COORDINATES: similar to AA sequence:RefSeq:WP_011829936.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009513879.1
COORDINATES: similar to AA sequence:RefSeq:WP_007364262.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: protein motif:HMM:NF024581.2
COORDINATES: protein motif:HMM:NF014774.2
CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013176222.1
CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013120809.1
COORDINATES: similar to AA sequence:RefSeq:WP_012302733.1
COORDINATES: protein motif:HMM:TIGR00072.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360318.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512152.1
COORDINATES: similar to AA sequence:RefSeq:WP_007358952.1
GO:0019104 - DNA N-glycosylase activity [Evidence IEA]
GO:0036297 - interstrand cross-link repair [Evidence IEA]
crosslink repair DNA glycosylase YcaQ family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009508083.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509301.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_007360554.1
threonine/serine exporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007360555.1
COORDINATES: protein motif:HMM:NF001989.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513556.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513557.1
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: similar to AA sequence:RefSeq:WP_007360562.1
homocysteine S-methyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009513561.1
GO:0008705 - methionine synthase activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
vitamin B12 dependent-methionine synthase activation domain-containing protein
COORDINATES: protein motif:HMM:NF019887.2
COORDINATES: protein motif:HMM:NF005495.0
COORDINATES: similar to AA sequence:RefSeq:WP_007360363.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510962.1
COORDINATES: protein motif:HMM:NF019615.2
COORDINATES: similar to AA sequence:RefSeq:WP_007361089.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511846.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363960.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
phosphoribosylformylglycinamidine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_012376519.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373996.1
COORDINATES: similar to AA sequence:RefSeq:WP_012376527.1
COORDINATES: similar to AA sequence:RefSeq:WP_012376526.1
COORDINATES: protein motif:HMM:NF003037.0
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007361620.1
bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH
COORDINATES: protein motif:HMM:NF040048.1
COORDINATES: protein motif:HMM:NF003715.0
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012375942.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507886.1
COORDINATES: protein motif:HMM:NF019934.2
COORDINATES: similar to AA sequence:RefSeq:WP_007360445.1
tRNA-uridine aminocarboxypropyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007364096.1
pyridoxal phosphate-dependent aminotransferase
COORDINATES: protein motif:HMM:NF028441.2
outer membrane lipoprotein-sorting protein
COORDINATES: similar to AA sequence:RefSeq:WP_009512841.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508182.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512753.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360505.1
septum formation initiator family protein
COORDINATES: protein motif:HMM:NF017539.2
COORDINATES: similar to AA sequence:RefSeq:WP_009513256.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007361822.1
3-deoxy-D-arabino-heptulosonate 7-phosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_007359725.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509113.1
COORDINATES: similar to AA sequence:RefSeq:WP_007364102.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360569.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363053.1
COORDINATES: protein motif:HMM:NF025156.2
COORDINATES: protein motif:HMM:NF020967.2
COORDINATES: protein motif:HMM:NF038123.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359605.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363398.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_007363399.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507869.1
COORDINATES: similar to AA sequence:RefSeq:WP_012376589.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363951.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360599.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360600.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_007362788.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508940.1
COORDINATES: protein motif:HMM:NF019844.2
COORDINATES: similar to AA sequence:RefSeq:WP_012376597.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: similar to AA sequence:RefSeq:WP_009508943.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009511300.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360865.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510031.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510030.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377232.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509508.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509510.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360295.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009508050.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508959.1
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: protein motif:HMM:TIGR01845.1
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007358933.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508167.1
GO:0055085 - transmembrane transport [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007358935.1
COORDINATES: protein motif:HMM:NF025895.2
COORDINATES: protein motif:HMM:NF024981.2
bile acid:sodium symporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009507829.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: protein motif:HMM:TIGR02605.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360206.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362277.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007362278.1
GO:0004618 - phosphoglycerate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011897301.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_009513493.1
COORDINATES: protein motif:HMM:NF013080.2
COORDINATES: similar to AA sequence:RefSeq:WP_012376633.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: similar to AA sequence:RefSeq:WP_012376638.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359508.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363461.1
COORDINATES: similar to AA sequence:RefSeq:WP_012376641.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363508.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016348.2
GO:0061024 - membrane organization [Evidence IEA]; GO:0010033 - response to organic substance [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009511768.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508478.1
COORDINATES: similar to AA sequence:RefSeq:WP_007358617.1
COORDINATES: similar to AA sequence:RefSeq:WP_008073352.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359944.1
GO:0046428 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity [Evidence IEA]
1,4-dihydroxy-2-naphthoate polyprenyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007360338.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360339.1
COORDINATES: similar to AA sequence:RefSeq:WP_009514080.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009514081.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013767.2
COORDINATES: protein motif:HMM:NF003958.0
COORDINATES: protein motif:HMM:NF016252.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363576.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363575.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363526.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360289.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360290.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009513187.1
LpxI, functionally equivalent to LpxH, replaces it in LPS biosynthesis in a minority of bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.
UDP-2,3-diacylglucosamine diphosphatase LpxI
COORDINATES: similar to AA sequence:RefSeq:WP_007360201.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513183.1
tRNA-dihydrouridine synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009514297.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361161.1
GO:0008233 - peptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007361228.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513411.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009514036.1
COORDINATES: protein motif:HMM:NF016908.2
COORDINATES: protein motif:HMM:NF014790.2
COORDINATES: protein motif:HMM:NF013200.2
electron transfer flavoprotein subunit beta
electron transfer flavoprotein subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012376694.1
trans-2-enoyl-CoA reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012376695.1
COORDINATES: protein motif:HMM:NF025091.2
isocitrate lyase/phosphoenolpyruvate mutase family protein
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: protein motif:HMM:TIGR00507.1
COORDINATES: protein motif:HMM:NF027900.2
COORDINATES: protein motif:HMM:NF039905.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511827.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363656.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363657.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361156.1
glucose-6-phosphate dehydrogenase assembly protein OpcA
COORDINATES: similar to AA sequence:RefSeq:WP_007361157.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363078.1
COORDINATES: similar to AA sequence:RefSeq:WP_012376636.1
COORDINATES: protein motif:HMM:NF024910.2
COORDINATES: protein motif:HMM:NF015786.2
COORDINATES: similar to AA sequence:RefSeq:WP_009507692.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:NF002959.0
COORDINATES: similar to AA sequence:RefSeq:WP_009510493.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513180.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360196.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507527.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507524.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363651.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363652.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363653.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363654.1
TAT-variant-translocated molybdopterin oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_007363655.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359542.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508770.1
COORDINATES: protein motif:HMM:NF003013.0
GO:0004020 - adenylylsulfate kinase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012375247.1
COORDINATES: similar to AA sequence:RefSeq:WP_017944086.1
GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
sulfotransferase domain-containing protein
COORDINATES: protein motif:HMM:NF017522.2
TylF/MycF/NovP-related O-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007361034.1
COORDINATES: protein motif:HMM:NF027267.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0097351 - toxin sequestering activity [Evidence IEA]
GO:0001558 - regulation of cell growth [Evidence IEA]
type II toxin-antitoxin system PrlF family antitoxin
methyltransferase regulatory domain-containing protein
COORDINATES: protein motif:HMM:NF025877.2
COORDINATES: protein motif:HMM:NF012422.2
COORDINATES: protein motif:HMM:NF013621.2
COORDINATES: protein motif:HMM:NF020133.2
COORDINATES: protein motif:HMM:TIGR02134.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513511.1
COORDINATES: protein motif:HMM:NF012630.2
GO:0031012 - extracellular matrix [Evidence IEA]
GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016291874.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01214.1
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007358811.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002221803.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: protein motif:HMM:NF024273.2
COORDINATES: similar to AA sequence:RefSeq:WP_012376809.1
COORDINATES: similar to AA sequence:RefSeq:WP_012376808.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359762.1
pyridoxal phosphate-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007360787.1
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360786.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511445.1
COORDINATES: protein motif:HMM:NF019589.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363666.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509426.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508526.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359371.1
COORDINATES: protein motif:HMM:NF013384.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359370.1
COORDINATES: similar to AA sequence:RefSeq:WP_007364150.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512835.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359319.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513648.1
COORDINATES: protein motif:HMM:NF015859.2
COORDINATES: similar to AA sequence:RefSeq:WP_009511918.1
COORDINATES: protein motif:HMM:NF025034.2
COORDINATES: protein motif:HMM:NF013362.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359261.1
GO:0003711 - transcription elongation factor activity [Evidence IEA]
GO:0006354 - DNA-templated transcription elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF021221.2
COORDINATES: similar to AA sequence:RefSeq:WP_009509112.1
COORDINATES: similar to AA sequence:RefSeq:WP_003110349.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360167.1
COORDINATES: protein motif:HMM:NF019285.2
nucleoside transporter C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009507700.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363524.1
COORDINATES: protein motif:HMM:NF023167.2
COORDINATES: similar to AA sequence:RefSeq:WP_009512378.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_012376846.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362395.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009511986.1
COORDINATES: protein motif:HMM:NF015094.2
COORDINATES: protein motif:HMM:NF021621.2
COORDINATES: protein motif:HMM:TIGR03561.1
GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03914.1
This protein belongs to the uracil DNA glycosylase superfamily, members of which act in excision repair of DNA. However, it belongs more specifically to UdgX branch, whose founding member was found to bind uracil in DNA (where it does not belong), without cleaving it, appears to promote DNA repair by a pathway involving RecA, rather than base excision; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF004225.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013015.2
COORDINATES: protein motif:HMM:NF012381.2
COORDINATES: similar to AA sequence:RefSeq:WP_009508434.1
COORDINATES: protein motif:HMM:NF014713.2
COORDINATES: protein motif:HMM:NF015747.2
NAD(P)-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00412.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359069.1
COORDINATES: protein motif:HMM:NF013340.2
YbhB/YbcL family Raf kinase inhibitor-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_012374553.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359116.1
cytochrome-c oxidase, cbb3-type subunit I
COORDINATES: protein motif:HMM:NF024834.2
cbb3-type cytochrome c oxidase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007359113.1
GO:0008535 - respiratory chain complex IV assembly [Evidence IEA]
cytochrome c oxidase accessory protein CcoG
COORDINATES: protein motif:HMM:NF024778.2
COORDINATES: similar to AA sequence:RefSeq:WP_007360165.1
heavy metal translocating P-type ATPase metal-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012766.2
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
aminopeptidase P N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009507542.1
COORDINATES: similar to AA sequence:RefSeq:WP_009507540.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360223.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508196.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013276.2
GO:0030599 - pectinesterase activity [Evidence IEA]
GO:0042545 - cell wall modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012373264.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509154.1
COORDINATES: protein motif:HMM:NF015012.2
L-dopachrome tautomerase-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_007362349.1
COORDINATES: similar to AA sequence:RefSeq:WP_014154242.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362992.1
GO:0008775 - acetate CoA-transferase activity [Evidence IEA]
GO:0006084 - acetyl-CoA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009509877.1
COORDINATES: protein motif:HMM:NF004326.0
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: protein motif:HMM:NF005012.1
NADH-quinone oxidoreductase subunit B family protein
GO:0016151 - nickel cation binding [Evidence IEA]
nickel-dependent hydrogenase large subunit
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: protein motif:HMM:NF024376.2
PhnD/SsuA/transferrin family substrate-binding protein
beta-propeller fold lactonase family protein
COORDINATES: protein motif:HMM:NF013199.2
COORDINATES: protein motif:HMM:NF006078.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003910 - DNA ligase (ATP) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012905.2
COORDINATES: protein motif:HMM:NF014671.2
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: protein motif:HMM:TIGR01701.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510628.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007361271.1
COORDINATES: similar to AA sequence:RefSeq:WP_009510626.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363003.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007363002.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009513402.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01921.1
GO:0047850 - diaminopimelate dehydrogenase activity [Evidence IEA]
GO:0009085 - lysine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016357.2
CDP-glycerol--poly(glycerophosphate) glycerophosphotransferase
GO:0070567 - cytidylyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009510921.1
COORDINATES: protein motif:HMM:TIGR03904.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF026257.2
COORDINATES: similar to AA sequence:RefSeq:WP_007358887.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007358971.1
COORDINATES: similar to AA sequence:RefSeq:WP_002503432.1
COORDINATES: similar to AA sequence:RefSeq:WP_007358969.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508136.1
COORDINATES: similar to AA sequence:RefSeq:WP_007358967.1
putative Fe-S cluster assembly protein SufT
COORDINATES: protein motif:HMM:NF018949.2
COORDINATES: similar to AA sequence:RefSeq:WP_007364261.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359518.1
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016045.2
low affinity iron permease family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012376983.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360013.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360014.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360015.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359963.1
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
methylenetetrahydrofolate reductase [NAD(P)H]
COORDINATES: similar to AA sequence:RefSeq:WP_009509617.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363097.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509615.1
GO:0004591 - oxoglutarate dehydrogenase (succinyl-transferring) activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
2-oxoglutarate dehydrogenase E1 component
COORDINATES: similar to AA sequence:RefSeq:WP_007363099.1
GO:0045252 - oxoglutarate dehydrogenase complex [Evidence IEA]
GO:0004149 - dihydrolipoyllysine-residue succinyltransferase activity [Evidence IEA]
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007363100.1
COORDINATES: protein motif:HMM:NF024488.2
COORDINATES: similar to AA sequence:RefSeq:WP_007364215.1
COORDINATES: similar to AA sequence:RefSeq:WP_007364216.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007364217.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508619.1
GO:0016624 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359419.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359422.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007359423.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007360221.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013899.2
COORDINATES: similar to AA sequence:RefSeq:WP_012377014.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016530 - metallochaperone activity [Evidence IEA]
GO:0019627 - urea metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009509686.1
COORDINATES: similar to AA sequence:RefSeq:WP_007363735.1
COORDINATES: protein motif:HMM:NF036804.2
COORDINATES: protein motif:HMM:TIGR00067.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012377023.1
GO:0016151 - nickel cation binding [Evidence IEA]; GO:0009039 - urease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012377024.1
GO:0035550 - urease complex [Evidence IEA]
GO:0043419 - urea catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012377025.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509361.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360043.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]
GO:0015840 - urea transport [Evidence IEA]
urea ABC transporter ATP-binding protein UrtD
COORDINATES: similar to AA sequence:RefSeq:WP_007360042.1
GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]
urea ABC transporter permease subunit UrtC
COORDINATES: similar to AA sequence:RefSeq:WP_007360041.1
urea ABC transporter permease subunit UrtB
COORDINATES: similar to AA sequence:RefSeq:WP_009509358.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]; GO:0033219 - urea binding [Evidence IEA]
urea ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR02001.1
COORDINATES: similar to AA sequence:RefSeq:WP_007358643.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_007358642.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01725
SAM-I-IV-variant riboswitch; SAM riboswitches modulate the expression of downstream genes in response to levels of S-adenosylmethionine; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_007359939.1
COORDINATES: similar to AA sequence:RefSeq:WP_009514776.1
GO:0003747 - translation release factor activity [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013097.2
COORDINATES: similar to AA sequence:RefSeq:WP_009512972.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359231.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012375059.1
COORDINATES: protein motif:HMM:NF013955.2
COORDINATES: protein motif:HMM:NF028237.2
histidine kinase N-terminal 7TM domain-containing protein
COORDINATES: protein motif:HMM:NF025611.2
COORDINATES: protein motif:HMM:NF012888.2
COORDINATES: protein motif:HMM:NF019126.2
COORDINATES: protein motif:HMM:NF019477.2
Nif11-like leader peptide family natural product precursor
COORDINATES: similar to AA sequence:RefSeq:WP_007358728.1
COORDINATES: similar to AA sequence:RefSeq:WP_007358737.1
COORDINATES: similar to AA sequence:RefSeq:WP_007358738.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362776.1
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_012377064.1
GO:0008697 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity [Evidence IEA]
5-dehydro-4-deoxy-D-glucuronate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_007358938.1
GO:0008678 - 2-deoxy-D-gluconate 3-dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0000272 - polysaccharide catabolic process [Evidence IEA]
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
COORDINATES: protein motif:HMM:NF027479.2
COORDINATES: similar to AA sequence:RefSeq:WP_009509106.1
COORDINATES: protein motif:HMM:NF025965.2
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: protein motif:HMM:NF013315.2
COORDINATES: similar to AA sequence:RefSeq:WP_012377084.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377080.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377078.1
COORDINATES: similar to AA sequence:RefSeq:WP_012373423.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360646.1
COORDINATES: protein motif:HMM:NF027582.2
COORDINATES: similar to AA sequence:RefSeq:WP_012377092.1
GO:0008880 - glucuronate isomerase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013292.2
COORDINATES: protein motif:HMM:NF016246.2
COORDINATES: similar to AA sequence:RefSeq:WP_007361291.1
COORDINATES: protein motif:HMM:NF024295.2
COORDINATES: protein motif:HMM:TIGR02778.1
COORDINATES: protein motif:HMM:TIGR02779.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377109.1
COORDINATES: protein motif:HMM:NF015476.2
COORDINATES: protein motif:HMM:NF019130.2
GO:0046559 - alpha-glucuronidase activity [Evidence IEA]
GO:0045493 - xylan catabolic process [Evidence IEA]
alpha-glucuronidase family glycosyl hydrolase
COORDINATES: protein motif:HMM:NF024675.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013707.2
COORDINATES: similar to AA sequence:RefSeq:WP_016290713.1
COORDINATES: similar to AA sequence:RefSeq:WP_012376037.1
COORDINATES: protein motif:HMM:NF019614.2
COORDINATES: protein motif:HMM:NF019735.2
GO:0005576 - extracellular region [Evidence IEA]
polysaccharide lyase family 8 super-sandwich domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012376007.1
COORDINATES: similar to AA sequence:RefSeq:WP_009512369.1
COORDINATES: protein motif:HMM:NF014615.2
COORDINATES: protein motif:HMM:NF014296.2
methylenetetrahydrofolate reductase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF025925.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363920.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00765.1
COORDINATES: protein motif:HMM:NF023697.2
COORDINATES: protein motif:HMM:NF012492.2
COORDINATES: similar to AA sequence:RefSeq:WP_012376072.1
COORDINATES: protein motif:HMM:NF013539.2
COORDINATES: protein motif:HMM:NF010184.0
COORDINATES: similar to AA sequence:RefSeq:WP_012377171.1
COORDINATES: protein motif:HMM:NF040319.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513755.1
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: protein motif:HMM:NF021594.2
COORDINATES: protein motif:HMM:NF033859.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513846.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377245.1
COORDINATES: protein motif:HMM:NF016292.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009508418.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377285.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377151.1
COORDINATES: protein motif:HMM:NF037410.2
COORDINATES: similar to AA sequence:RefSeq:WP_008063311.1
COORDINATES: protein motif:HMM:TIGR01480.1
copper resistance system multicopper oxidase
COORDINATES: protein motif:HMM:NF017119.2
COORDINATES: protein motif:HMM:NF015941.2
COORDINATES: protein motif:HMM:NF025173.2
COORDINATES: similar to AA sequence:RefSeq:WP_007358899.1
COORDINATES: similar to AA sequence:RefSeq:WP_016176834.1
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: protein motif:HMM:NF023255.2
COORDINATES: protein motif:HMM:NF021619.2
COORDINATES: similar to AA sequence:RefSeq:WP_012375458.1
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: protein motif:HMM:NF027875.2
glycogen-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR02094.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374375.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374374.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513258.1
COORDINATES: protein motif:HMM:TIGR00914.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513262.1
COORDINATES: protein motif:HMM:NF012753.2
COORDINATES: protein motif:HMM:TIGR01163.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509308.1
COORDINATES: protein motif:HMM:NF013232.2
COORDINATES: protein motif:HMM:NF014672.2
COORDINATES: similar to AA sequence:RefSeq:WP_012377159.1
COORDINATES: protein motif:HMM:NF024610.2
COORDINATES: protein motif:HMM:NF025638.2
COORDINATES: similar to AA sequence:RefSeq:WP_012374012.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374013.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374014.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374016.1
COORDINATES: protein motif:HMM:NF025495.2
COORDINATES: similar to AA sequence:RefSeq:WP_012374017.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513796.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374019.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374020.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374021.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374022.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374023.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374026.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374028.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374029.1
COORDINATES: similar to AA sequence:RefSeq:WP_009513779.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374031.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374032.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374033.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374035.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377286.1
COORDINATES: similar to AA sequence:RefSeq:WP_009514101.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360227.1
COORDINATES: protein motif:HMM:TIGR00074.1
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: protein motif:HMM:NF014034.2
GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02124.1
hydrogenase expression/formation protein HypE
COORDINATES: protein motif:HMM:TIGR00100.1
GO:0008901 - ferredoxin hydrogenase activity [Evidence IEA]
hydrogenase maturation nickel metallochaperone HypA
COORDINATES: protein motif:HMM:TIGR00073.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
hydrogenase nickel incorporation protein HypB
COORDINATES: protein motif:HMM:TIGR00143.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024260.2
COORDINATES: similar to AA sequence:RefSeq:WP_007363937.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0140658 - ATP-dependent chromatin remodeler activity [Evidence IEA]; GO:0016817 - hydrolase activity, acting on acid anhydrides [Evidence IEA]
COORDINATES: protein motif:HMM:NF013052.2
SET domain-containing protein-lysine N-methyltransferase
COORDINATES: protein motif:HMM:NF015513.2
COORDINATES: protein motif:HMM:NF017745.2
COORDINATES: similar to AA sequence:RefSeq:WP_009512206.1
COORDINATES: similar to AA sequence:RefSeq:WP_012374821.1
COORDINATES: protein motif:HMM:NF025793.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359252.1
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03790.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377332.1
COORDINATES: protein motif:HMM:NF014677.2
COORDINATES: similar to AA sequence:RefSeq:WP_007359400.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508584.1
iron-sulfur cluster assembly accessory protein
COORDINATES: similar to AA sequence:RefSeq:WP_009508587.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359403.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508100.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377341.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01783.1
COORDINATES: similar to AA sequence:RefSeq:WP_007361738.1
PepSY-associated TM helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007363459.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360224.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
glutamine synthetase beta-grasp domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007360340.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360341.1
COORDINATES: protein motif:HMM:NF017868.2
COORDINATES: similar to AA sequence:RefSeq:WP_007362709.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: protein motif:HMM:NF013188.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00710.1
COORDINATES: protein motif:HMM:NF027708.2
COORDINATES: protein motif:HMM:NF014307.2
NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta
COORDINATES: protein motif:HMM:NF024179.2
COORDINATES: protein motif:HMM:NF013430.2
COORDINATES: protein motif:HMM:NF014788.2
COORDINATES: similar to AA sequence:RefSeq:WP_007362561.1
GO:0009009 - site-specific recombinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003130554.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362559.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362558.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004784 - superoxide dismutase activity [Evidence IEA]
GO:0006801 - superoxide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007359550.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359552.1
COORDINATES: similar to AA sequence:RefSeq:WP_012377375.1
COORDINATES: similar to AA sequence:RefSeq:WP_009509476.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359053.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508537.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508684.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: protein motif:HMM:NF015912.2
RNA polymerase sigma factor region1.1 domain-containing protein
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR01411.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511707.1
COORDINATES: similar to AA sequence:RefSeq:WP_009511709.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362806.1
COORDINATES: protein motif:HMM:NF023418.2
DUF3488 and transglutaminase-like domain-containing protein
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: similar to AA sequence:RefSeq:WP_007360621.1
COORDINATES: similar to AA sequence:RefSeq:WP_007360067.1
cytochrome c nitrite reductase small subunit
COORDINATES: protein motif:HMM:NF014398.2
GO:0042279 - nitrite reductase (cytochrome, ammonia-forming) activity [Evidence IEA]
ammonia-forming cytochrome c nitrite reductase subunit c552
COORDINATES: protein motif:HMM:NF015148.2
GO:0035673 - oligopeptide transmembrane transporter activity [Evidence IEA]
GO:0006857 - oligopeptide transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00728.1
COORDINATES: similar to AA sequence:RefSeq:WP_007364236.1
GO:0008677 - 2-dehydropantoate 2-reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007361970.1
COORDINATES: similar to AA sequence:RefSeq:WP_007362122.1
COORDINATES: protein motif:HMM:NF015823.2
ABC-type transport auxiliary lipoprotein family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009509531.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359019.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359020.1
COORDINATES: similar to AA sequence:RefSeq:WP_007359021.1
COORDINATES: protein motif:HMM:NF017081.2
COORDINATES: similar to AA sequence:RefSeq:WP_009508002.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: similar to AA sequence:RefSeq:WP_007363250.1
COORDINATES: similar to AA sequence:RefSeq:WP_009508000.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase