Amphritea japonica strain JCM 14782 plasmid pJCM14782, 16s ribosomal rna rrna prediction is too short.
type: Entry
definition: Amphritea japonica strain JCM 14782 plasmid pJCM14782, 16s ribosomal rna rrna prediction is too short.
sequence version: NZ_AP025762.1
sequence date: 2022-09-29
sequence: sequence
division: CON
label: NZ_AP025762.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00493149
keyword: RefSeq
source: Amphritea japonica
organism: Amphritea japonica
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales; Oceanospirillaceae; Amphritea.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP025762.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. 0.4.7\nGenome Coverage :: 296x\nSequencing Technology :: Illumina MiSeq; Nanopore\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 09/29/2022 10:48:09\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,573\nCDSs (total) :: 3,477\nGenes (coding) :: 3,463\nCDSs (with protein) :: 3,463\nGenes (RNA) :: 96\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 74\nncRNAs :: 7\nPseudo Genes (total) :: 14\nCDSs (without protein) :: 14\nPseudo Genes (ambiguous residues) :: 0 of 14\nPseudo Genes (frameshifted) :: 2 of 14\nPseudo Genes (incomplete) :: 13 of 14\nPseudo Genes (internal stop) :: 2 of 14\nPseudo Genes (multiple problems) :: 2 of 14\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 94338
topology: circular
so has quality: SO_0000988
location: 1..94338
location: region:1-94338:1
RO_0002162: 452627

NZ_AP025762
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00493149
type: BioSample
SIO_000068: biosample

1
title: Taxonomic revision of the genus Amphritea supported by genomic and in silico chemotaxonomic analyses, and the proposal of Aliamphritea gen. nov
author: Yamano, R.
author: Yu, J.
author: Jiang, C.
author: Harjuno, A.
author: Haditomo, C.
author: Mino, S.
author: Sakai, Y.
author: Sawabe, T.
journal: PLoS ONE (2022) In press

2
title: Direct Submission
author: Sawabe, T.
author: Mino, S.
author: Yamano, R.
journal: Submitted (24-MAY-2022) Contact:Tomoo Sawabe Hokkaido University, Faculty of Fisheries Sciences; 3-1-1 Minato-cho, Hakodate, Hokkaido 041-8611, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94338:1
position: 94338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-94338:1:source
so part of: sequence
organism: Amphritea japonica
mol type: genomic DNA
strain: JCM 14782
culture collection: JCM:14782
type material: type strain of Amphritea japonica
plasmid: pJCM14782

452627
type: Taxonomy
SIO_000068: taxonomy

PT3_RS17405
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17405
so part of: sequence
location: 1..1129
location: region:1-1129:1
so has part: feature:1-1129:1:exon
subclass of: SO_0000573

position:1129:1
position: 1129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1129:1:exon

PT3_RS17405
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 452627
locus tag: PT3_RS17405
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: PT3_RS17405
subclass of: SO_0000673
so part of: PT3_RS17405
location: 1..1129
location: region:1-1129:1
so has part: feature:1-1129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-1129:1:exon

PT3_RS17410
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17410
so part of: sequence
location: 1194..1269
location: region:1194-1269:1
so has part: feature:1194-1269:1:exon
subclass of: SO_0000663

position:1194:1
position: 1194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269:1
position: 1269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194-1269:1:exon

PT3_RS17410
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 452627
locus tag: PT3_RS17410
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1227..1229,aa:Ala,seq:tgc)
SIO_010081: PT3_RS17410
subclass of: SO_0000673
so part of: PT3_RS17410
location: 1194..1269
location: region:1194-1269:1
so has part: feature:1194-1269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1194-1269:1:exon

PT3_RS17415
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17415
so part of: sequence
location: 1499..4391
location: region:1499-4391:1
so has part: feature:1499-4391:1:exon
subclass of: SO_0000573

position:1499:1
position: 1499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4391:1
position: 4391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1499-4391:1:exon

PT3_RS17415
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 452627
locus tag: PT3_RS17415
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: PT3_RS17415
subclass of: SO_0000673
so part of: PT3_RS17415
location: 1499..4391
location: region:1499-4391:1
so has part: feature:1499-4391:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1499-4391:1:exon

PT3_RS17420
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: rrf
locus tag: PT3_RS17420
so part of: sequence
location: 4534..4649
location: region:4534-4649:1
so has part: feature:4534-4649:1:exon
subclass of: SO_0000573

position:4534:1
position: 4534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4649:1
position: 4649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4534-4649:1:exon

PT3_RS17420
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 452627
gene: rrf
locus tag: PT3_RS17420
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: PT3_RS17420
subclass of: SO_0000673
so part of: PT3_RS17420
location: 4534..4649
location: region:4534-4649:1
so has part: feature:4534-4649:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4534-4649:1:exon

PT3_RS17425
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: carA
locus tag: PT3_RS17425
so part of: sequence
location: 5032..6165
location: region:5032-6165:1
so has part: feature:5032-6165:1:exon
subclass of: SO_0000010

position:5032:1
position: 5032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6165:1
position: 6165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5032-6165:1:exon

PT3_RS17425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: carA
locus tag: PT3_RS17425
EC number: 6.3.5.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013662757.1
GO component: GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO function: GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
translation: MTRPAILALEDGSIFRGVAIGADGQSNGEVVFNTSMTGYQEILTDPSYCRQIVTLTYPHIGNVGTNKEDEESSNTWVAGLVIRDLPLVASSWRNEQSLDDYLKEKNIVGIADIDTRRLTRILREKGSLNGCIMAGDIDEDSALAAAKAFAGLKGMDLAKEVTTSEQYQWTSTTWDRVEGHQEIDEVELPHHVVAYDFGVKRNILRMLVERGCRLTVVPAKTPAAEVLALNPDGVFLSNGPGDPEPCDYAITAIQEICKSDLPVFGICLGHQLLALASGAQTMKMKFGHHGANHPVQDLNSKQVMITSQNHGFAVDEGSMPENLRATHKSLFDGSLQGIERTDRAAFSFQGHPEASPGPRDVAPLFDRFIRDIEARKA
SIO_010081: PT3_RS17425
subclass of: SO_0000673
so part of: PT3_RS17425
location: 5032..6165
location: region:5032-6165:1
so has part: feature:5032-6165:1:exon

WP_019623109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5032-6165:1:exon

PT3_RS17430
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: carB
locus tag: PT3_RS17430
so part of: sequence
location: 6254..9460
location: region:6254-9460:1
so has part: feature:6254-9460:1:exon
subclass of: SO_0000010

position:6254:1
position: 6254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9460:1
position: 9460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6254-9460:1:exon

PT3_RS17430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: carB
locus tag: PT3_RS17430
EC number: 6.3.5.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020287427.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbamoyl-phosphate synthase large subunit
translation: MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMADATYIEPIQWKTVAKIIEQERPDALLPTMGGQTALNCALDLEREGVLEQFGVEMIGANADTIDKAEDRDRFDKAMKSIGLECPRAAIAHSMEEALQVQSQLGFPSIIRPSFTMGGTGGGIAYNKEEFIEICERGLDLSPTSELLIDESLIGWKEYEMEVVRDKSDNCIIICSIENFDAMGVHTGDSITVAPAQTLTDKEYQWMRDASLAVLREIGVETGGSNVQFGQCPNTGRFVIIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNDITGGATPASFEPAIDYVVTKIPRFTFEKFPQANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGLDPIVDLDSEDARAEIVREMKQPGAERIWYVGDAFRLGMSVDELYELSGIDHWYLVQIEDLIKDEQRISEMSLSELDKDKLFRLKRKGFADARLATLLGVSEKQVRKRRHSMDIRPVYKRVDTCAAEFSTDTAYMYSTYEEECESKPSGREKIMVIGGGPNRIGQGIEFDYCCVHAALAAREDGFETIMVNCNPETVSTDYDTSDRLYFEPITLEDVLEIVHVEQPKGVIVQYGGQTPLKLALALEQAGVPIIGTSPEAIDRAEDREQFQQLLKRLGLKQPENATVRSLEEAIIEAEKLGYPLVVRPSYVLGGRAMEIVYKESELRQYMTTAVQVSHDAPVLLDHFLNAAIEVDIDAVSDGETVVIGAIMQHIEQAGVHSGDSACSFPPYSLADDLQDEMREMVRKMALELGVVGLMNTQLAYQDGEVYVIEVNPRASRTVPFVSKCIGVSLAKIGAQVMTGKTLQEIGFTEEIVPTLYNVKEAVFPFNKFQGVDPILSPEMKSTGEVMGVGETFGEAFMKAQLGAGEKMPDTGKAFVSVREVDKHHILPVARDLVGLGFTLVATRGTAALLEAEGLEVQVVNKVMEGRPNIVDMLKNDEIVYVINTTEGRKAIADSAEIRRSALQHKVPYSTTLAGAEAMTKAMQYGEEKVVRRLQDLH
SIO_010081: PT3_RS17430
subclass of: SO_0000673
so part of: PT3_RS17430
location: 6254..9460
location: region:6254-9460:1
so has part: feature:6254-9460:1:exon

WP_019623110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6254-9460:1:exon

PT3_RS17435
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: greA
locus tag: PT3_RS17435
so part of: sequence
location: 9473..9949
location: region:9473-9949:1
so has part: feature:9473-9949:1:exon
subclass of: SO_0000010

position:9473:1
position: 9473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9949:1
position: 9949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9473-9949:1:exon

PT3_RS17435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: greA
locus tag: PT3_RS17435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019019088.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO process: GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription elongation factor GreA
translation: MQKFPMTVLGEKTLREELDDLKTVQRPIVIASIAEAREHGDLKENAEYHAAREQQGFIEGRIQELEGKLGSVQVIDVTQIPHTGKVIFGTTVEIINLETDATVRYQIVGDDEADIKNGKISISSPIARALIGKEEGDVAVVQTPNGGVEYEVDQVFHI
SIO_010081: PT3_RS17435
subclass of: SO_0000673
so part of: PT3_RS17435
location: 9473..9949
location: region:9473-9949:1
so has part: feature:9473-9949:1:exon

WP_019623111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9473-9949:1:exon

PT3_RS17440
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17440
so part of: sequence
location: complement(10023..10325)
location: region:10023-10325:-1
so has part: feature:10023-10325:-1:exon
subclass of: SO_0000010

position:10023:-1
position: 10023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10325:-1
position: 10325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10023-10325:-1:exon

PT3_RS17440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012068736.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YhbY family RNA-binding protein
translation: MSLTSTQKKQFRTIGHKLNPIITVAGNGLSENILLEADRALEDHELIKVKFAVGDRDAKKQLITEMAKIVEALIVQEIGNVALFYRAAKTPDPKLSNLLR
SIO_010081: PT3_RS17440
subclass of: SO_0000673
so part of: PT3_RS17440
location: complement(10023..10325)
location: region:10023-10325:-1
so has part: feature:10023-10325:-1:exon

WP_026340258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10023-10325:-1:exon

PT3_RS17445
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: rlmE
locus tag: PT3_RS17445
so part of: sequence
location: 10449..11069
location: region:10449-11069:1
so has part: feature:10449-11069:1:exon
subclass of: SO_0000010

position:10449:1
position: 10449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11069:1
position: 11069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10449-11069:1:exon

PT3_RS17445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: rlmE
locus tag: PT3_RS17445
EC number: 2.1.1.166
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007021189.1
GO function: GO:0016436 - rRNA (uridine) methyltransferase activity [Evidence IEA]
GO process: GO:0001510 - RNA methylation [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
translation: MARSKSSGRWLQEHFDDQYVRKAKELGYRSRASFKLQELNEKDKLIRPGMTLVDLGAAPGGWSQVAAELVGDEGRVVSSDILEMDPLPGVQFIQGDFTEETVLNEILETLGNELADLVISDMAPNMSGMNAVDQPAAMYLVELALDMARQVLRPGGDFVAKVFQGEGFDEYMNDMRSSFTKVYSRKPDSSRARSREVYLIGRNFRP
SIO_010081: PT3_RS17445
subclass of: SO_0000673
so part of: PT3_RS17445
location: 10449..11069
location: region:10449-11069:1
so has part: feature:10449-11069:1:exon

WP_019623113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10449-11069:1:exon

PT3_RS17450
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: ftsH
locus tag: PT3_RS17450
so part of: sequence
location: 11159..13129
location: region:11159-13129:1
so has part: feature:11159-13129:1:exon
subclass of: SO_0000010

position:11159:1
position: 11159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13129:1
position: 13129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11159-13129:1:exon

PT3_RS17450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: ftsH
locus tag: PT3_RS17450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010325165.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent zinc metalloprotease FtsH
translation: MAKNLVLWLVIAAVLLTVFNNFNSESTSQTLTYSEFISAVKEDQVRRVVIEGYTIEGERINGEHFETVRPALQDPKLVDDLYNHNVQIEGKQPEKQSVWTQLLVASFPILIILAIFMFFMRQMQGGGGGKGGPMSFGKSKARMMSEDQIKTTFDDVAGVEEAKEEVKELVDYLRDPGKFQRLGGHIPRGVLMSGNPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGVGMGGGNDEREQTLNQLLVEMDGFEGTEGVIVIAATNRPDVLDPALLRPGRFDRQVHVGLPDIRGREKILKVHMRKVPLGDDVKPDLIARGTPGFSGADLANLVNEAALFAARASKRTVGMEQFERAKDKIMMGAERKSMVMSYEERLNTAYHESGHAIVGRLMPEHDPVYKVSIIPRGRALGVTMFLPEEDRYSHSRKMLISNICSLYGGRIAEEMTLGKDGVTTGASNDIQRATSLARNMVARWGLSEEMGPLLYDDEEQDPFNRGYGQGAKPMSEDIQRKIDAETRKIIDQCYSNAAQMLEDNRDILETMTQALMKYETIDSGQIDELMDRKPVTAPEGWQESDSRAARDEAAKAKDEEEDDFELDDAEVSDDDSDESAPGSDKPDQNLH
SIO_010081: PT3_RS17450
subclass of: SO_0000673
so part of: PT3_RS17450
location: 11159..13129
location: region:11159-13129:1
so has part: feature:11159-13129:1:exon

WP_019623114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11159-13129:1:exon

PT3_RS17455
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: folP
locus tag: PT3_RS17455
so part of: sequence
location: 13265..14077
location: region:13265-14077:1
so has part: feature:13265-14077:1:exon
subclass of: SO_0000010

position:13265:1
position: 13265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14077:1
position: 14077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13265-14077:1:exon

PT3_RS17455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: folP
locus tag: PT3_RS17455
EC number: 2.5.1.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007021187.1
GO function: GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO process: GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydropteroate synthase
translation: MGIVNVTPDSFSDGGSLYESRKLCVDQAVSRARQMVKDGAAFIDVGGESTRPGATPVSLQEEMDRVLPVIERINAEIDVIVSVDTSAPELISEVGRLGVGLINDVRALGREGALEAAAATGLPVCVMHMQGSPATMQDAPEYEDVLDDVSYFLNQRVSACNKAGISNDRIILDPGFGFGKTVEHNLRLLNNLSQLHEMGLPLLVGTSRKTMIDHVLDRPVDQRLAGGLATVAIGVQQGAKIFRVHDVRETVDVVRMTEAVLNESVLNEDS
SIO_010081: PT3_RS17455
subclass of: SO_0000673
so part of: PT3_RS17455
location: 13265..14077
location: region:13265-14077:1
so has part: feature:13265-14077:1:exon

WP_083935423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13265-14077:1:exon

PT3_RS17460
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: glmM
locus tag: PT3_RS17460
so part of: sequence
location: 14077..15411
location: region:14077-15411:1
so has part: feature:14077-15411:1:exon
subclass of: SO_0000010

position:15411:1
position: 15411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14077-15411:1:exon

PT3_RS17460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: glmM
locus tag: PT3_RS17460
EC number: 5.4.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013819889.1
GO function: GO:0016868 - intramolecular transferase activity, phosphotransferases [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglucosamine mutase
translation: MTKRYFGTDGIRGKVGTAPITPDFMLKLGWAAGKVFAREGRSKIIIGKDTRISGYMFESALEAGLSAAGVDVLLLGPMPTPAIAYLTRTFRCNAGIVISASHNPYYDNGIKFFSEQGTKLPDDIEHAIEAQMDMAMTTVEAAQLGKARRIEDAAGRYIEFCKGTVAGDLQLKGLKIAVDCANGATYHIAPKVFRELGAEVIEIASSPDGININEDCGATSTRLLERVVVAEQADLGIALDGDGDRLIMVDHKGAPVDGDELLFIIAMEMKRKNQLKGGVVGTLMSNFGLEQGLKQAEIPFVRAQVGDRYVMTELAEREWFLGGESSGHLICRHLISTGDGIVAALQVLRAMADTGASLHVLKSAMGKMPQTMINVRLSEKVDVISLPAVQAAVVDIESRLGDRGRVLLRPSGTEPLVRVMIEGDDAVWVESLCKELAEVVRKAL
SIO_010081: PT3_RS17460
subclass of: SO_0000673
so part of: PT3_RS17460
location: 14077..15411
location: region:14077-15411:1
so has part: feature:14077-15411:1:exon

WP_019623116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14077-15411:1:exon

PT3_RS17465
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: tpiA
locus tag: PT3_RS17465
so part of: sequence
location: 15497..16261
location: region:15497-16261:1
so has part: feature:15497-16261:1:exon
subclass of: SO_0000010

position:15497:1
position: 15497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16261:1
position: 16261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15497-16261:1:exon

PT3_RS17465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: tpiA
locus tag: PT3_RS17465
EC number: 5.3.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008931993.1
GO function: GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: triose-phosphate isomerase
translation: MRKTIVAGNWKMNGTRESIKTLLDAITDRAMKIDGLVTLVCPPAVYLSQVVDQIADAPVAVGAQNVSEQSKGAYTGEWSLEMLQDLGCKYVILGHSERRSLFGESDELVAEKVAATLEAGLVPVLCVGETLGQREAGDALVVVNSQISATLQRIGIEGFASVVVAYEPVWAIGTGLTATPGDAQEVHAAIRAQLAEKDAIIADNLSILYGGSMNAANAAELLAQQDIDGGLIGGASLKADEFLTICAAAAESRK
SIO_010081: PT3_RS17465
subclass of: SO_0000673
so part of: PT3_RS17465
location: 15497..16261
location: region:15497-16261:1
so has part: feature:15497-16261:1:exon

WP_019623117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15497-16261:1:exon

PT3_RS17470
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: secG
locus tag: PT3_RS17470
so part of: sequence
location: 16274..16639
location: region:16274-16639:1
so has part: feature:16274-16639:1:exon
subclass of: SO_0000010

position:16274:1
position: 16274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16639:1
position: 16639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16274-16639:1:exon

PT3_RS17470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: secG
locus tag: PT3_RS17470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020683560.1
GO component: GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecG
translation: METLVLAVHVLLAAAIIALVLLQQGKGAEAGASFGAGASQTVFGSKGTGSFLSRMTAVMATGLFVTSFILAVYAKEQASSVTEAGVPAAELIESAAQQAETLPVLEEQKVPAGDADVPPAE
SIO_010081: PT3_RS17470
subclass of: SO_0000673
so part of: PT3_RS17470
location: 16274..16639
location: region:16274-16639:1
so has part: feature:16274-16639:1:exon

WP_019623118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16274-16639:1:exon

PT3_RS17475
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17475
so part of: sequence
location: 16655..16741
location: region:16655-16741:1
so has part: feature:16655-16741:1:exon
subclass of: SO_0000663

position:16655:1
position: 16655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16741:1
position: 16741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16655-16741:1:exon

PT3_RS17475
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 452627
locus tag: PT3_RS17475
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:16689..16691,aa:Leu,seq:gag)
SIO_010081: PT3_RS17475
subclass of: SO_0000673
so part of: PT3_RS17475
location: 16655..16741
location: region:16655-16741:1
so has part: feature:16655-16741:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16655-16741:1:exon

PT3_RS17480
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17480
so part of: sequence
location: 16926..17002
location: region:16926-17002:1
so has part: feature:16926-17002:1:exon
subclass of: SO_0000663

position:16926:1
position: 16926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17002:1
position: 17002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16926-17002:1:exon

PT3_RS17480
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 452627
locus tag: PT3_RS17480
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:16960..16962,aa:Met,seq:cat)
SIO_010081: PT3_RS17480
subclass of: SO_0000673
so part of: PT3_RS17480
location: 16926..17002
location: region:16926-17002:1
so has part: feature:16926-17002:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16926-17002:1:exon

PT3_RS17485
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: rimP
locus tag: PT3_RS17485
so part of: sequence
location: 17300..17755
location: region:17300-17755:1
so has part: feature:17300-17755:1:exon
subclass of: SO_0000010

position:17300:1
position: 17300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17755:1
position: 17755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17300-17755:1:exon

PT3_RS17485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: rimP
locus tag: PT3_RS17485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013797347.1
GO process: GO:0042274 - ribosomal small subunit biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome maturation factor RimP
translation: MSAKLSVLQELIEPSVVALGYQLWGFEMISQGRHSMLRIYIDAEAGIDVEDCAKVSRQVSGILDVEDPISGEYTLEVSSPGMDRPLFTLEQYSAYVGHVLQLKLRMPFDGRRNFKGLLSGIENEDIVLVVDQEEYLLPIDHIEKANIVPQF
SIO_010081: PT3_RS17485
subclass of: SO_0000673
so part of: PT3_RS17485
location: 17300..17755
location: region:17300-17755:1
so has part: feature:17300-17755:1:exon

WP_019623119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17300-17755:1:exon

PT3_RS17490
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: nusA
locus tag: PT3_RS17490
so part of: sequence
location: 17797..19287
location: region:17797-19287:1
so has part: feature:17797-19287:1:exon
subclass of: SO_0000010

position:17797:1
position: 17797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19287:1
position: 19287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17797-19287:1:exon

PT3_RS17490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: nusA
locus tag: PT3_RS17490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010325159.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor NusA
translation: MNKEILLVAEAVSNEKDVSKEIIFEAIELALATATKKRYDEEADIRVVIDRTSGGYQTFRRWTVVSNEGVPMLGTELNMEEVEEIDKSLQPGDIHEEEVESVKFGRIAAQTAKQVIVQKVREAERAKVVALYSGRLGELISGTVKKVTRDNIIMDLGNNAEAVLPRDQLLPRETYRMGDRVRAVLNEIRTEGRGPQLAMSRSCPEMLIELFRIEVPEISEEVIEIRAASRDPGSRAKIAVKTNDGRIDPVGACVGMRGARVQAVSNELSGERVDIILWDDNPAQLVLNAMSPAEVASIVVDEDSRSMDVAVAEENLAMAIGRGGQNVRLASELTDWKLNVMTEDEAAEKQQSEAGSILEIFVKHLDVDDDIAEVLVDEGFTSLEEVAYVPAEEMLEIDGFDEDIVDELRTRAKDALLNLAIASEEVLDNAEPAQDLLEMEGMERHLAFVLASKGIVTMEDLAEQAVEDLLDIEELDKEKAAALIMTARAPWFADEE
SIO_010081: PT3_RS17490
subclass of: SO_0000673
so part of: PT3_RS17490
location: 17797..19287
location: region:17797-19287:1
so has part: feature:17797-19287:1:exon

WP_019623120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17797-19287:1:exon

PT3_RS17495
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: infB
locus tag: PT3_RS17495
so part of: sequence
location: 19311..21842
location: region:19311-21842:1
so has part: feature:19311-21842:1:exon
subclass of: SO_0000010

position:19311:1
position: 19311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21842:1
position: 21842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19311-21842:1:exon

PT3_RS17495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: infB
locus tag: PT3_RS17495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010325158.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-2
translation: MAEVTVKQLAEVVGVPVDRLLTQMKQAGIAGKNEVASVTEDERQKLLNHLKRSHGEKSDGEPKKITLKRKTTSQLKVSGAAGKKTINVEVRKKRTYVKRSDVEETPVQEAKGSSLQTELKDQARRDTELQAAQEKQREDARLKAEAEAKAKANRAAAPAATPKKPAAAPKKPAAAKPAAAGAAKTAGAPAPAAATPKPDRKKNFRSQDKPAAGRRGNDKRLSRKPGGRDGNRRGKPVQRGMTSSNVQAFEKPTAPVIHEVGIPESITVAELAKKMSVKAADLIKVMFKMGAMATINSVIDQDTATLVVEEMGHTAVPMAENTVEDQLNQTSGAAEEIAGEQVERAPVVTVMGHVDHGKTSLLDYIRETRVAAGESGGITQHIGAYHVETGHGMVSFLDTPGHAAFTAMRARGAQLTDIVILVVAADDGVMPQTEEAVDHAKAAGVPLVIAVNKIDKEDADPDRVKNELAQRDVIPEDWGGDVQFVNVSAKTGEGIDQLLDAVLLQSELLELTAIPEASGRGVVVESRLDKGRGPVATLLVQNGTLNQGDIVLAGLQYGRVRAMLDENGKPVKAAGPSIPVEILGLDGTPGAGEEFTVVSNEKKAREVALFRQGKYREVKLQRQQQAKLENLFENMQAGDVKTLNIILKADVRGSLEALNASLMDLSTDEVKVNIVSGGVGGIAETDANLALASSAIMIGFNVRADAQARAIVEREEIELRYYSVIYDIIDDVKQAMTGLLSPEFKEEIVGIAEVRDVFRAPKIGAVAGCMVTEGSVFRNKRIRVLRENVVIYEGELESLRRFKDNVADVRQGMECGIGVKNYNDVKVGDQIEVFDTVEVQRTL
SIO_010081: PT3_RS17495
subclass of: SO_0000673
so part of: PT3_RS17495
location: 19311..21842
location: region:19311-21842:1
so has part: feature:19311-21842:1:exon

WP_019623121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19311-21842:1:exon

PT3_RS17500
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: rbfA
locus tag: PT3_RS17500
so part of: sequence
location: 21861..22259
location: region:21861-22259:1
so has part: feature:21861-22259:1:exon
subclass of: SO_0000010

position:21861:1
position: 21861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22259:1
position: 22259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21861-22259:1:exon

PT3_RS17500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: rbfA
locus tag: PT3_RS17500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011508363.1
GO function: GO:0019843 - rRNA binding [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosome-binding factor RbfA
translation: MAREFSRTQRISDQVQKDLAQLIQREIKDPRLGMVTISYVKIAKDLGYADIYITVMAMGGKDEATAVKESLKVLNNAAGFLRGQLSSKIKLRVMPQLRFHFDESVDRGRRLNDLIIQASQADGRNNNSEDGE
SIO_010081: PT3_RS17500
subclass of: SO_0000673
so part of: PT3_RS17500
location: 21861..22259
location: region:21861-22259:1
so has part: feature:21861-22259:1:exon

WP_019623122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21861-22259:1:exon

PT3_RS17505
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: truB
locus tag: PT3_RS17505
so part of: sequence
location: 22263..23219
location: region:22263-23219:1
so has part: feature:22263-23219:1:exon
subclass of: SO_0000010

position:22263:1
position: 22263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23219:1
position: 23219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22263-23219:1:exon

PT3_RS17505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: truB
locus tag: PT3_RS17505
EC number: 5.4.99.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017084245.1
GO function: GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA pseudouridine(55) synthase TruB
translation: MARRAKGRPVNGIFLLDKPGGISSNRALQIVKRVYGAAKAGHTGALDPLATGMLPLCFGEATKFSQFLLDADKRYITTAKLGQRTDTSDADGVVVEERPLPDNLSSEQIDTLLQSDFTGLITQVPSMFSALKHNGQPLYKLARQGIEVEVKSRQITVHSIEVLDFRGDEVDLDIRCSKGTYIRSIVQDMGEILGCGAHVKMLRRLDSGPYKAENMMPLADLEQLVADMATDASAEQIQTHLDGLLLPPWSPVEDAPEVLLSDVQTDALCKGQRVVLEDIAAQPLVRIRDAASEKFLGIGEIDAAGQLLPRRLMSTQDL
SIO_010081: PT3_RS17505
subclass of: SO_0000673
so part of: PT3_RS17505
location: 22263..23219
location: region:22263-23219:1
so has part: feature:22263-23219:1:exon

WP_026340260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22263-23219:1:exon

PT3_RS17510
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: rpsO
locus tag: PT3_RS17510
so part of: sequence
location: 23344..23613
location: region:23344-23613:1
so has part: feature:23344-23613:1:exon
subclass of: SO_0000010

position:23344:1
position: 23344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23613:1
position: 23613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23344-23613:1:exon

PT3_RS17510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: rpsO
locus tag: PT3_RS17510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012068748.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S15
translation: MALSVEKKAEIVAEYARAEGDTGSPEVQVALLTNNIVGLQSHFKGHIHDHHSRRGLIRMVNQRRKLLDYLKKKDVTRYADLIKRLGLRR
SIO_010081: PT3_RS17510
subclass of: SO_0000673
so part of: PT3_RS17510
location: 23344..23613
location: region:23344-23613:1
so has part: feature:23344-23613:1:exon

WP_019623124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23344-23613:1:exon

PT3_RS17515
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: pnp
locus tag: PT3_RS17515
so part of: sequence
location: 23829..25931
location: region:23829-25931:1
so has part: feature:23829-25931:1:exon
subclass of: SO_0000010

position:23829:1
position: 23829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25931:1
position: 25931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23829-25931:1:exon

PT3_RS17515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: pnp
locus tag: PT3_RS17515
EC number: 2.7.7.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007021177.1
GO function: GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyribonucleotide nucleotidyltransferase
translation: MPQAITKTFQYGKHEVTLETGRIARQASGAVLVTMGGVQVLCTVVGAKSAREGQDFFPLAVHYQEKYYAVGRIPGGFFKREARPSEKETLTSRLIDRPIRPLFPKGYMNEVQVICTVVSADKVNDPDIAALLGTSAALAISGIPFQGPIGGARVGYTEDAGYSLNPTYEELQSSMLDMVVAGTSDAVLMVESEAQELSEDEMLGAVVFGHQQMQVAINAINELVAEAGKPRWEYTPEAKNEALIEQVRASVGEDINAAYQTADKMQRQTALSDARAKVVAALCGEEGQPSAGEVGDIFKSLEKEIVRGRIIDGQPRIDGRDSKTVRGIEVEIDVLSGTHGSSLFTRGETQSVVTCTLGTARDQQIIDAIEGERRDPFMLHYNFPPYSVGEAGRIGFTGRREVGHGRLARRGVAAVLPSQEEFPYTIRLVSEITESNGSSSMASVCGASLSMMDAGVPLKAPVAGIAMGLVKDGERFAVLTDILGDEDHLGDMDFKVAGTDAGVTALQMDIKITGITEEIMDIALEQAYEARAHILKEMAKVIGYARPELPDNAPAMTLLEINPEKIRDVIGKGGATIRALTEETGATIDIEDNGTVRIYAADKAAAKAAVDKVKEITAEAEVGQVYEGKVVRLEEFGAFVNILPGKDGLVHISQIANKRIEKVTDYIKMDDVIKVKVLDVDPRGRIKLTMRDLEADESVE
SIO_010081: PT3_RS17515
subclass of: SO_0000673
so part of: PT3_RS17515
location: 23829..25931
location: region:23829-25931:1
so has part: feature:23829-25931:1:exon

WP_019623125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23829-25931:1:exon

PT3_RS17520
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17520
so part of: sequence
location: 26023..26493
location: region:26023-26493:1
so has part: feature:26023-26493:1:exon
subclass of: SO_0000010

position:26023:1
position: 26023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26493:1
position: 26493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26023-26493:1:exon

PT3_RS17520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008988824.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CreA family protein
translation: MLKSVLIGGLVLFLTGCSGDEVGDVSLGMLTTKDIKLNVLVDPKIPGVTCHVASIEADLDFSDPSDSSIACRQTGIISPDMIASIDRSKDGEVVFRKSKSVFFKTMKIRRILDPESQTLMYLSYSTKEINGSYKHSLSTVPLWGTSAYQKVFSPTN
SIO_010081: PT3_RS17520
subclass of: SO_0000673
so part of: PT3_RS17520
location: 26023..26493
location: region:26023-26493:1
so has part: feature:26023-26493:1:exon

WP_019623126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26023-26493:1:exon

PT3_RS17525
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17525
so part of: sequence
location: complement(26490..26840)
location: region:26490-26840:-1
so has part: feature:26490-26840:-1:exon
subclass of: SO_0000010

position:26490:-1
position: 26490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26840:-1
position: 26840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26490-26840:-1:exon

PT3_RS17525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17525
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGSLRIDAWLERREPVIKLHSGVSDSLIAEWHGSAVIELLEQGIVTHEEMLSNDHNRQQQAAHELLLNACANSLCSRNGPQCFNCITGRLLRALAHSDSSADQPSVAGLELYKAVV
SIO_010081: PT3_RS17525
subclass of: SO_0000673
so part of: PT3_RS17525
location: complement(26490..26840)
location: region:26490-26840:-1
so has part: feature:26490-26840:-1:exon

WP_019623127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26490-26840:-1:exon

PT3_RS17530
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17530
so part of: sequence
location: 27291..27830
location: region:27291-27830:1
so has part: feature:27291-27830:1:exon
subclass of: SO_0000010

position:27291:1
position: 27291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27830:1
position: 27830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27291-27830:1:exon

PT3_RS17530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17530
inference: COORDINATES: protein motif:HMM:NF020123.2
GO function: GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: redoxin domain-containing protein
translation: MNGFIRTFVVLFVGLGLSFSANAGKLQTSLPAPEFTQAGTDSWLNSPPLSLKELRGTVVMLDFWTFDCWNCYRSFPWMGELEQKLADEAFTVIGIHTPEFAHERVRANVEAKIDEFKLHHPVMMDNDFTYWQMMGNKYWPTFYLIDKQGLVRSIYIGETHAGSEQARAIERDIRGLLRE
SIO_010081: PT3_RS17530
subclass of: SO_0000673
so part of: PT3_RS17530
location: 27291..27830
location: region:27291-27830:1
so has part: feature:27291-27830:1:exon

WP_026340261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27291-27830:1:exon

PT3_RS17535
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17535
so part of: sequence
location: 27971..28372
location: region:27971-28372:1
so has part: feature:27971-28372:1:exon
subclass of: SO_0000010

position:27971:1
position: 27971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28372:1
position: 28372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27971-28372:1:exon

PT3_RS17535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013345599.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPRRLTQTKPHTHQTLKNMSYESMVISWLMYDGWQVFTPVLDNGHQTDILISDGPSYFRIQIKTVEASGEDHVVDNKWEESNVDYVIYFARNSTWGVIAPAFSDKKRPLNHDEHIRFEANSRTQFLKVLHTID
SIO_010081: PT3_RS17535
subclass of: SO_0000673
so part of: PT3_RS17535
location: 27971..28372
location: region:27971-28372:1
so has part: feature:27971-28372:1:exon

WP_019623129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27971-28372:1:exon

PT3_RS17540
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17540
so part of: sequence
location: complement(28506..29189)
location: region:28506-29189:-1
so has part: feature:28506-29189:-1:exon
subclass of: SO_0000010

position:28506:-1
position: 28506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29189:-1
position: 29189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28506-29189:-1:exon

PT3_RS17540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17540
inference: COORDINATES: protein motif:HMM:NF018496.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YciC family protein
translation: MVPLYLKQTWFFFRANLIPIMRIQLPFIILITIISMSATQSIDPENPQINNSFMMFYLASLIFLPIYVGATIAYLESVVNDQPINTIEALKAGLSRWWPLLITKMLGAFGIVIGLFLFFIPGIYVLIRFAFSEYHSVIEKNNPTDALKNSWDDTSEYFWPLVNGLAVLFVILLGSNLLLEALLQSMGIESLLFRSLLDIVFGFLNCLYTVYGFRLYCVMREGPAEQG
SIO_010081: PT3_RS17540
subclass of: SO_0000673
so part of: PT3_RS17540
location: complement(28506..29189)
location: region:28506-29189:-1
so has part: feature:28506-29189:-1:exon

WP_019623130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28506-29189:-1:exon

PT3_RS17545
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17545
so part of: sequence
location: complement(29211..30254)
location: region:29211-30254:-1
so has part: feature:29211-30254:-1:exon
subclass of: SO_0000010

position:29211:-1
position: 29211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30254:-1
position: 30254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29211-30254:-1:exon

PT3_RS17545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020683569.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyltransferase
translation: MSDIAFTLLKPELDNASGTALWIADENLLNQTSQVNPDVMVITNRFDLCQQLKDASWQATFSDFDFSHYNDHSVDKMLYRISKEKPVVHHVINQAIRILKPGGQLCISGLKNEGIKTYLDKAKKLFAGQIELVKADKNTWMGILSSPGKADTDFLEDQNYTELREVATDSNFSYISKPGVYGWNKIDKGSAYLIEELELFLERLPTPPESVLDLGCGYGYLSLNCSTLDAKITATDNNSAALRLCKENLAQQGVEADVIAADCAEGIREKFSLIVCNPPFHQGFSVEGDMTDRFLNAARRRLQANGIACFVVNLHIPLERKALNLFDSIETIAANGSFKLVLLAQPQ
SIO_010081: PT3_RS17545
subclass of: SO_0000673
so part of: PT3_RS17545
location: complement(29211..30254)
location: region:29211-30254:-1
so has part: feature:29211-30254:-1:exon

WP_019623131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29211-30254:-1:exon

PT3_RS17550
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: rsuA
locus tag: PT3_RS17550
so part of: sequence
location: complement(30251..30943)
location: region:30251-30943:-1
so has part: feature:30251-30943:-1:exon
subclass of: SO_0000010

position:30251:-1
position: 30251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30943:-1
position: 30943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30251-30943:-1:exon

PT3_RS17550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: rsuA
locus tag: PT3_RS17550
EC number: 5.4.99.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011866772.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA pseudouridine(516) synthase RsuA
translation: MRLDKYLSQATGLPRSLIKRQIKCKNVEVNKQVIQDHGYKVLADDQVLLEGREIMAPGPKYLMLNKPQGTICATEDSEHPTVIDLLELESIRDLHPAGRLDIDTTGLVLITNDGQWSHRVTSPKHRCDKVYFVTTAEPITDDYPEQFANGIELRNEEKPTLPAELEILSETSARVTLQEGRYHQVKRMFAALGNRVIGLHRHQVGEIALDETLEPGEFRFLTEQEVASVK
SIO_010081: PT3_RS17550
subclass of: SO_0000673
so part of: PT3_RS17550
location: complement(30251..30943)
location: region:30251-30943:-1
so has part: feature:30251-30943:-1:exon

WP_019623132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30251-30943:-1:exon

PT3_RS17555
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17555
so part of: sequence
location: 31073..31909
location: region:31073-31909:1
so has part: feature:31073-31909:1:exon
subclass of: SO_0000010

position:31073:1
position: 31073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31909:1
position: 31909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31073-31909:1:exon

PT3_RS17555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020683571.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-carboxytetrahydropterin synthase
translation: MKLFVDNLTNVDFSYLHPQRGLLGESWLVQLVLDGSLNDQGMICDFGIVKKAVKQWFDDCIDHALVVPTGMADLQIDHQSAETTVNWRYPDGGEFFCRSPEQAIVLVELEQVTETSLAAWCKDRLLELFPEEVKGLEISFVPEAISGAFYHYSHGLQQHDGNCQRIAHGHRSRIEVFLDGVRDTGVEQQWAETFHDIYIGTRNHLIAEPSAEHHYQYDAPQGQFEIRLPSEYCYLVETETTVEQIACHLAEQVKAAYPGRDVMVRAFEGVGKGAIVTA
SIO_010081: PT3_RS17555
subclass of: SO_0000673
so part of: PT3_RS17555
location: 31073..31909
location: region:31073-31909:1
so has part: feature:31073-31909:1:exon

WP_019623133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31073-31909:1:exon

PT3_RS17560
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17560
so part of: sequence
location: complement(31977..33158)
location: region:31977-33158:-1
so has part: feature:31977-33158:-1:exon
subclass of: SO_0000010

position:31977:-1
position: 31977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33158:-1
position: 33158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31977-33158:-1:exon

PT3_RS17560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019814919.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA C-acetyltransferase
translation: MRDVVIVAAGRTAVGNFNGSLASVAASDLGATVIKGLLEKSGIQGNQVDEVILGQVLTAGCGQNPARQATINAGLPVEVSAMTINKVCGSGLKAIQLATQAIRCGDADIIIAGGQENMSMSAHVLPNSRNGARMGDWKMVDTMIKDGLWDAFNDYHMGITTENIAAKYGFTREEQDAFAAASQNKAEAAQKAGKFDDEIIPVVIPKRRGDDVVFDTDEQPRHGATAEALGKLRPAFKKDGTVTAGNASTINDGAAAVIVCSAEKAAELGLPVLATIKAYASAGVEPSIMGTGPICATQKALDKAGWSVSDLELVEANEAFAAQAMSVNKDLGWDTDIVNVNGGAIAMGHPIGASGCRIFVSLLHEMARRDAKKGLATLCIGGGMGTALAIERS
SIO_010081: PT3_RS17560
subclass of: SO_0000673
so part of: PT3_RS17560
location: complement(31977..33158)
location: region:31977-33158:-1
so has part: feature:31977-33158:-1:exon

WP_019623134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31977-33158:-1:exon

PT3_RS17565
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: panC
locus tag: PT3_RS17565
so part of: sequence
location: complement(33483..34331)
location: region:33483-34331:-1
so has part: feature:33483-34331:-1:exon
subclass of: SO_0000010

position:33483:-1
position: 33483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34331:-1
position: 34331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33483-34331:-1:exon

PT3_RS17565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: panC
locus tag: PT3_RS17565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007021170.1
GO function: GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO process: GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pantoate--beta-alanine ligase
translation: MQTIFSIAELREVLGAERRAGKRIGFVPTMGNLHTGHIQLIHQSNNNADITVASIFVNPLQFGENEDLDAYPRTLSADQEKLAAAGCDYLFAPNSKEVYPNGQVIQTLVEVPGISDIHCGASRPGHFRGVATVVCKLFGMVQPDVAIFGEKDFQQLMVIQRMAEDLFLPVEIQGSPIARAKSGLALSSRNGYLTPEELATAPALNRAIRTTVAAINAGRRDYLNLQEEAQITLEEAGFKRDYYNICNRFDLQPAQSDHSELVLVAAAYLGKARLIDNMVIDL
SIO_010081: PT3_RS17565
subclass of: SO_0000673
so part of: PT3_RS17565
location: complement(33483..34331)
location: region:33483-34331:-1
so has part: feature:33483-34331:-1:exon

WP_019623135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33483-34331:-1:exon

PT3_RS17570
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: panB
locus tag: PT3_RS17570
so part of: sequence
location: complement(34334..35128)
location: region:34334-35128:-1
so has part: feature:34334-35128:-1:exon
subclass of: SO_0000010

position:34334:-1
position: 34334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35128:-1
position: 35128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34334-35128:-1:exon

PT3_RS17570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: panB
locus tag: PT3_RS17570
EC number: 2.1.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010325147.1
GO function: GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO process: GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-methyl-2-oxobutanoate hydroxymethyltransferase
translation: MGNITLHTLTALKQAGKKFAVLTAYDACFSHLISTAGVEVMLVGDSLGMVLQGNDSTLPVTVEEMAYHTAAVKAGNQGSMIMADLPFMSYGTPEQAMDSAAALMSAGAHIIKLEGAAWLDETITLLAERGVPVCAHLGLTPQAVNVLGGYKVQGRENNAAKQMIEDAVRLEQAGAAMLLLECVPSLLAGEITKAVDIPVIGIGAGAETDAQVLVMHDMLGITPGRSPKFVKNFMTDSGDIAGAFEAYADEVKAGTFPGTEHGFE
SIO_010081: PT3_RS17570
subclass of: SO_0000673
so part of: PT3_RS17570
location: complement(34334..35128)
location: region:34334-35128:-1
so has part: feature:34334-35128:-1:exon

WP_019623136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34334-35128:-1:exon

PT3_RS17575
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: folK
locus tag: PT3_RS17575
so part of: sequence
location: complement(35260..35748)
location: region:35260-35748:-1
so has part: feature:35260-35748:-1:exon
subclass of: SO_0000010

position:35260:-1
position: 35260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35748:-1
position: 35748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35260-35748:-1:exon

PT3_RS17575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: folK
locus tag: PT3_RS17575
EC number: 2.7.6.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008217900.1
GO function: GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO process: GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
translation: MADQWINCYIGLGSNLENPVTQVATALLELERLEHCRNLTHSSLYRSDPVGPPDQPDYINAVAQLETSLHPLALLDALQAIEQQHQRVRIQHWGPRTLDLDLLLYGDEQINSDRLTVPHPYLHERNFVLYPLAEIAPQLSIPPGKNLTNYLENCQKDSLERI
SIO_010081: PT3_RS17575
subclass of: SO_0000673
so part of: PT3_RS17575
location: complement(35260..35748)
location: region:35260-35748:-1
so has part: feature:35260-35748:-1:exon

WP_019623137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35260-35748:-1:exon

PT3_RS17580
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: pcnB
locus tag: PT3_RS17580
so part of: sequence
location: complement(35741..37153)
location: region:35741-37153:-1
so has part: feature:35741-37153:-1:exon
subclass of: SO_0000010

position:35741:-1
position: 35741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37153:-1
position: 37153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35741-37153:-1:exon

PT3_RS17580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: pcnB
locus tag: PT3_RS17580
EC number: 2.7.7.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010325145.1
GO function: GO:0004652 - polynucleotide adenylyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006378 - mRNA polyadenylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polynucleotide adenylyltransferase PcnB
translation: MDNNSSPIGSFIRRLFGSNNKSSESADNQQAQGRQIIPEEVHQIPRRRLNDAAMKTAYHLQDEGFEGYLVGGCIRDLLMNKHPKDFDVATSATPDQAHALFRRSRLIGRRFKLLHVRFGRDLIEVATFRASHDSHPKNNDGEHGRQNDSGMIVRDNVYGTIEEDALRRDFTVNALYYCPNDHCIYDFTNGFSDLKNGTLRMIGDPDARYREDPVRMLRAARFAAKLGFTLEPASEAPLKELGYLLKDIAPARLFDEALKIFQSGHGVESFHQLRKYNLLEPLLQQTAYSLDNPDDYPVEKLVLNALQNTDRRIQQDKSVTPAFLFAALLWYPMQRRMKQLKEEAGMHTVPAMHEAANQVIGNQIRQTAIPRRFSTPIREIWELQFRLPRRQGKRADRLIEHPRFRAAYDLLILRENSGEELDGLGKWWTDYQVQNPQIRSHMSREATKDAPPKRRRRRRGPAKKQESNNG
SIO_010081: PT3_RS17580
subclass of: SO_0000673
so part of: PT3_RS17580
location: complement(35741..37153)
location: region:35741-37153:-1
so has part: feature:35741-37153:-1:exon

WP_019623138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35741-37153:-1:exon

PT3_RS17585
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17585
so part of: sequence
location: complement(37724..39121)
location: region:37724-39121:-1
so has part: feature:37724-39121:-1:exon
subclass of: SO_0000010

position:37724:-1
position: 37724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39121:-1
position: 39121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37724-39121:-1:exon

PT3_RS17585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007021166.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-54 dependent transcriptional regulator
translation: MSRILIVEDESIIRTALRRLLERNSYAVDDAGSVDEATRQFNLNEYNLIISDLRLPGAPGTDLINLAKAVPVVIMTSYASMRSAVDAMKMGAVDYIAKPFDHDEVLDTIANIIKLRGAEDKSTQTTSETAAPPSTNQMVGTCKPMQDLFRRIHKVARTDATVLIQGESGTGKELAARAIHQQSARADAPMVSVNCASIPETLIESELFGHEKGAFTGADSARSGLIEAADGGTLFLDEIGELPLEAQARLLRFLQENEIRRVGAVKSTHVDVRLVAATHRNLKALAKTGEFREDLYYRLYVMELQMPPLRERGEDIIVIAQQFLQKSCDKLGSRLLKFSHDACQTMIRYNWPGNVRELQNAIERAVILADDHTITTDLLGLDIEPGSLAALESNFASGNSLVAETGENASERRPEQNLSLDDYFQRFVLENQDNMSETALAKKLGVSRKCLWERRQKLGIPRKPK
SIO_010081: PT3_RS17585
subclass of: SO_0000673
so part of: PT3_RS17585
location: complement(37724..39121)
location: region:37724-39121:-1
so has part: feature:37724-39121:-1:exon

WP_019623139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37724-39121:-1:exon

PT3_RS17590
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17590
so part of: sequence
location: complement(39187..42087)
location: region:39187-42087:-1
so has part: feature:39187-42087:-1:exon
subclass of: SO_0000010

position:39187:-1
position: 39187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42087:-1
position: 42087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39187-42087:-1:exon

PT3_RS17590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019623140.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MSFNLTELLFIATTYLTFLFGTAYITEKGWIPTRIIYHPVTYILSLGVFTSVWTFYGTFAQAKTSGYSFLASYLGGSAAFFLAPVILVPILRITRTYQLSSLADLFAFRFRSATAGTLTALFSLIAILPLISIQIHAVTESLHILNQDFSSEQVAIGFCTLIALFSILFGARNPSLRYNRTGLIVAMATGSLIKLIAIGSIALFALYGVMEGPDGLEQWLQQHPEETEVFNTPLDSDMWRTMLLGFFSAIIVMPHTFHMMFTENTSSNSLHKASWGVPLYLLLLALAVPPILWAGIKLGVGDQPAFLILNMGVALDSNFLTILAFIGGLAAASGIIIVATISITSMLQNHIILPLIPPVATHELYSRLLWLRRTLIIVMMLFSYLFYSKIGLNFNLQWLGTLTFIAFMQFLPGILATLFWPGANRAGFCLGLIAGMGTWIITMLLGLLNGTDIETAQFIQQDWHQIAIYALAANITIFLLASVITKSSKEEVASASACLHNSLQRPVGPQLDISNSDELVELLSKRLGKATAQREIDNALKELSLLNKELDAIDLMRLNTLIESRLSALFGPVGASLLLNQNAEDNTLNYYRTQDIHLLEGQLENYQTRLSGLAAELDNLRRHHRMTLQRLPIGACSLDEKGQIIFWNEEMEHFTGLRTPSVLTKKLASISAPWGELLAEFSAQKQNHLLSHHMLINEENCWISLHKASLADDTNAMVILLENETENQILVNRLSHNERLASIGRFAAGVAHEIGNPVTGIACLAQNLKYETDDPIILESGDQIVAQTDRITRIVQSLIRFAHTGQSDIQRYEESVNLKEVTDEAIHLVSMDSRGRQIQLINNIKAIVTVGGDPQRLLQVFVNLINNACDASPENSIVWLDALEHSSSIEVTVTDEGSGIVKEHQDKLFEPFFTTKDPGKGTGLGLPLVYNIIEEHYGSIRIVSPSNKNQNNGTQVVITLPKSLQE
SIO_010081: PT3_RS17590
subclass of: SO_0000673
so part of: PT3_RS17590
location: complement(39187..42087)
location: region:39187-42087:-1
so has part: feature:39187-42087:-1:exon

WP_261872460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39187-42087:-1:exon

PT3_RS17595
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17595
so part of: sequence
location: complement(42077..42253)
location: region:42077-42253:-1
so has part: feature:42077-42253:-1:exon
subclass of: SO_0000010

position:42077:-1
position: 42077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42253:-1
position: 42253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42077-42253:-1:exon

PT3_RS17595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007111811.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHFYRLLIVLMIGGYLLSPLLDQWWPDSATPWYRPFIIWAALILIVAILERRRRRDEF
SIO_010081: PT3_RS17595
subclass of: SO_0000673
so part of: PT3_RS17595
location: complement(42077..42253)
location: region:42077-42253:-1
so has part: feature:42077-42253:-1:exon

WP_019623141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42077-42253:-1:exon

PT3_RS17600
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: gluQRS
locus tag: PT3_RS17600
so part of: sequence
location: complement(42253..43128)
location: region:42253-43128:-1
so has part: feature:42253-43128:-1:exon
subclass of: SO_0000010

position:43128:-1
position: 43128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42253-43128:-1:exon

PT3_RS17600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: gluQRS
locus tag: PT3_RS17600
EC number: 6.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007021164.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]
GO process: GO:0043039 - tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA glutamyl-Q(34) synthetase GluQRS
translation: MVYTGRFAPSPTGPLHFGSLLAALASYLDARAHQGDWLIRIEDLDPPREVKGATDSILITLEQFGLHWDGEVILQSHRLSLYNEILTELSNNSLAYPCNCSRQQIQRRSGSVRYDGFCRSHPPDIDQICAIRSRCDTDYRFDDRILGPQDFSDQQEDFVIFRRDGLFAYQIAVTIDDAEQQVSHIVRGSDLLDSTPKQIHLQHQLGYQQPIYAHIPVATNALGQKLSKQTFAPALNQGERLQLMIRALDFLGQQPLKELADSSIEECLSWAVEHWDINNIPACLSISLEES
SIO_010081: PT3_RS17600
subclass of: SO_0000673
so part of: PT3_RS17600
location: complement(42253..43128)
location: region:42253-43128:-1
so has part: feature:42253-43128:-1:exon

WP_019623142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42253-43128:-1:exon

PT3_RS17605
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: dksA
locus tag: PT3_RS17605
so part of: sequence
location: complement(43166..43594)
location: region:43166-43594:-1
so has part: feature:43166-43594:-1:exon
subclass of: SO_0000010

position:43166:-1
position: 43166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43594:-1
position: 43594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43166-43594:-1:exon

PT3_RS17605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: dksA
locus tag: PT3_RS17605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007021163.1
GO function: GO:0019899 - enzyme binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase-binding protein DksA
translation: MPNQDTQFTHFEPYPIKEGEEYMNEPQKDHFRNILNAWKQELMEEVDRTVNHLQEEATNFADPSDRASQEEEFSLELRTRDRERKLINKISKAMETIDEDDYGYCNACGVEIGVRRLEARPTATLCIDCKTLAEIKEKQLGI
SIO_010081: PT3_RS17605
subclass of: SO_0000673
so part of: PT3_RS17605
location: complement(43166..43594)
location: region:43166-43594:-1
so has part: feature:43166-43594:-1:exon

WP_019623143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43166-43594:-1:exon

PT3_RS17610
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17610
so part of: sequence
location: 43991..45151
location: region:43991-45151:1
so has part: feature:43991-45151:1:exon
subclass of: SO_0000010

position:43991:1
position: 43991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45151:1
position: 45151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43991-45151:1:exon

PT3_RS17610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006451311.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxal phosphate-dependent aminotransferase
translation: MSNWSDRVAEIESFKVMDLLKRAKELDALGHDVVHMCAGEPDFATPEPIAEAGIAAIRAGHTQYTPAAGIPPLREAIAGFYQQRYGLDIPAERVIVTAGASGALLMVFATLANPGQRFMMADPGYPCNPRFLRLLEARGQLVPAEASDNYQLTPELIEQNWDAQTAGVLLASPANPTGSVVHREQLELISQTVRAKAGHLVVDELYHGLTYGFDATSVLEVDQDAFVLNSFSKYFGMTGWRLGWTVVPESAVSEIERLAQNLFISPPTIAQYAALEAFSPETTTILEQRRTAFQERRDLLVSGLRELGFGIPLTPEGAFYVYADASHLTDNTFDFCWELLEQDKVAVTPGIDFGDHRANQFIRFSYTTGIAQIEKALSRLRKRLTL
SIO_010081: PT3_RS17610
subclass of: SO_0000673
so part of: PT3_RS17610
location: 43991..45151
location: region:43991-45151:1
so has part: feature:43991-45151:1:exon

WP_019623144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43991-45151:1:exon

PT3_RS17615
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: sfsA
locus tag: PT3_RS17615
so part of: sequence
location: 45148..45852
location: region:45148-45852:1
so has part: feature:45148-45852:1:exon
subclass of: SO_0000010

position:45148:1
position: 45148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45852:1
position: 45852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45148-45852:1:exon

PT3_RS17615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: sfsA
locus tag: PT3_RS17615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007021161.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000023 - maltose metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA/RNA nuclease SfsA
translation: MKLENMQQGRLIKRYKRFLADIELDNGRQLTVHCPNTGSMKNCADPGSEVWIQDSGNLKRKYLFGWELVQVEGQFWACINTGRANGLIREAIENGVIDELQGYDSIRQEVKYGDENSRIDLFLEDAQRPSCYVEIKNVTLLEQQGVGAFPDAVTTRGAKHLRELMLMVERGHRSVLVFCVPHTGIEQVHPADHIDPEYGQLLREAVLAGVEVYAYGAKITPQEVTISHPLPLHL
SIO_010081: PT3_RS17615
subclass of: SO_0000673
so part of: PT3_RS17615
location: 45148..45852
location: region:45148-45852:1
so has part: feature:45148-45852:1:exon

WP_019623145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45148-45852:1:exon

PT3_RS17620
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17620
so part of: sequence
location: complement(45858..46184)
location: region:45858-46184:-1
so has part: feature:45858-46184:-1:exon
subclass of: SO_0000010

position:45858:-1
position: 45858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46184:-1
position: 46184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45858-46184:-1:exon

PT3_RS17620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020683585.1
GO function: GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rieske 2Fe-2S domain-containing protein
translation: MTTTTLLCQLSELPEHGAKGFDLDARKLFAVKRQKEVFLYENRCPHKGIPLEWMPDIFLDAEKQFIQCSTHGALFTIDQGQCIAGPCVGARLQQVDFTIIDGAICIQN
SIO_010081: PT3_RS17620
subclass of: SO_0000673
so part of: PT3_RS17620
location: complement(45858..46184)
location: region:45858-46184:-1
so has part: feature:45858-46184:-1:exon

WP_019623146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45858-46184:-1:exon

PT3_RS17625
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17625
so part of: sequence
location: 46314..47096
location: region:46314-47096:1
so has part: feature:46314-47096:1:exon
subclass of: SO_0000010

position:46314:1
position: 46314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47096:1
position: 47096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46314-47096:1:exon

PT3_RS17625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17625
inference: COORDINATES: protein motif:HMM:NF015506.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy transducer TonB
translation: MNSLLAALIESRIFLITIFLSGAVHLTLIGSGWLEDKASPALGGQSLAIKVTENRSVATATVEKMLENGPPAIPEVGAHKAEPKTEGAKTEVSKIIPKTSQKPVIKTTQSNTSIQRLSEKSAVSPTAPATTEVLPPPEPRVTRVDDPIVSPKQQAVSAPETIPAAPVYQSNPVFRQPPTPPRYPRLARKRGVEGQVMLRVNIGQDGNAQEVLIEQSSGSELLDRAARKAVQQWQFMPAQAGGIAVASYVRIPVDFVLETR
SIO_010081: PT3_RS17625
subclass of: SO_0000673
so part of: PT3_RS17625
location: 46314..47096
location: region:46314-47096:1
so has part: feature:46314-47096:1:exon

WP_019623147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46314-47096:1:exon

PT3_RS17630
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17630
so part of: sequence
location: 47096..48085
location: region:47096-48085:1
so has part: feature:47096-48085:1:exon
subclass of: SO_0000010

position:48085:1
position: 48085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47096-48085:1:exon

PT3_RS17630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020683587.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron ABC transporter permease
translation: MNDMKISGLFWLMLPLVMGLSLITGPVSVDLTEVFGDSVASQVFWQLRVPRLLLTLLAGALLAMTGAAAQSLFRNPLADPGLVGISAGAALSAGVVMVLLGSSVTLLGGLLLPLAAFAGGVVTTLLVARLAVTLQGISVTNMLLCGIAINAIALAGLGGLKYFAADNELRQLSFWLLGSLNHSRWQDLLVLLVAALPVLWLLPRYGQKLNLLLLGEQQASLLGLDVVRCKRVMILLIALGVGAVVALTGIIGFVGLVVPHLVRLLTGPDNRRLLPLSGLLGAVLLTVADILSRLLVSPAELPVGIVTALVGGPFFLLLLSRRKQESGIC
SIO_010081: PT3_RS17630
subclass of: SO_0000673
so part of: PT3_RS17630
location: 47096..48085
location: region:47096-48085:1
so has part: feature:47096-48085:1:exon

WP_019623148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47096-48085:1:exon

PT3_RS17635
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17635
so part of: sequence
location: 48079..48834
location: region:48079-48834:1
so has part: feature:48079-48834:1:exon
subclass of: SO_0000010

position:48079:1
position: 48079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48834:1
position: 48834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48079-48834:1:exon

PT3_RS17635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17635
inference: COORDINATES: protein motif:HMM:NF010068.0
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heme ABC transporter ATP-binding protein
translation: MLTASHLSLSRQGKLLLQGMNLELKPGEVTVLLGPNGAGKSSLLGLLSGQHSPDSGSVLLDEQPVAGLDPQLRACYLAMYTQQQPLSFSFRVEEVVALGCYPLQLDAVAMTERVKYYLTQFELDQLAQRQYTRLSGGEQQRVQVARVMAQVGDQCRVLLLDEPVSEMDLKYQQLLMQRIRQVAATGVAVCCVLHDLNLAAQLADQVVLLQNGQMLASGAVDEVMTESCLSDLYQVMVRKVDTETGPLFSSR
SIO_010081: PT3_RS17635
subclass of: SO_0000673
so part of: PT3_RS17635
location: 48079..48834
location: region:48079-48834:1
so has part: feature:48079-48834:1:exon

WP_019623149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48079-48834:1:exon

PT3_RS17640
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17640
so part of: sequence
location: complement(48886..50448)
location: region:48886-50448:-1
so has part: feature:48886-50448:-1:exon
subclass of: SO_0000010

position:48886:-1
position: 48886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50448:-1
position: 50448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48886-50448:-1:exon

PT3_RS17640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007021158.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MTQALITALSDPNNYPHPVTDIRVIETHISWVILTGEIAYKIKKPVNFGFLDFTSLESRKHYCNEELRLNQRLAPDIYQQVVSICGSAANPSLTHSELTSSELTEEPFEYAVQMRQFDDSLRLDRLLEKSALTAEHIDALSQQIANFHLQVPHASTDGPWGEPDTIWNVVSDNFLHTGEHLDTLDDWMELQQLAYQISQQFRSLTPKIEQRKREGNIRECHGDLHLANTTLLDDQVRLFDCIEFNLEFRWIDTICDLAFLLMDLEANQQQQLSHRALNRYLELTGDYDGTQLLNFYKGYRAMVRAKVSMIGAERDLQEYHRYIKLALSYANKPSPVLFLMHGVSGSGKSYISQQLLERSGAIRIRSDIERKRLHRELSLKGDNLELYGHEMNVHTYNHLKALTLKLLKVGESVIVDATFIRERTRTSYIQMAEKLSIEIRIISCSCNQALMEQRLERRQQEGIDPSDANVEIMRQQQSSKQPLSKAEQAFSYNVNSNAAEPIKNLCELIRQDPLIALPLS
SIO_010081: PT3_RS17640
subclass of: SO_0000673
so part of: PT3_RS17640
location: complement(48886..50448)
location: region:48886-50448:-1
so has part: feature:48886-50448:-1:exon

WP_019623150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48886-50448:-1:exon

PT3_RS17645
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: mrcB
locus tag: PT3_RS17645
so part of: sequence
location: 50520..52865
location: region:50520-52865:1
so has part: feature:50520-52865:1:exon
subclass of: SO_0000010

position:50520:1
position: 50520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52865:1
position: 52865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50520-52865:1:exon

PT3_RS17645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: mrcB
locus tag: PT3_RS17645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007021157.1
GO component: GO:0009274 - peptidoglycan-based cell wall [Evidence IEA]
GO function: GO:0008658 - penicillin binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008955 - peptidoglycan glycosyltransferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-binding protein 1B
translation: MAKKRGAASSRSQKSRKTPPKKSSWKRRLFKLLLKLTLVVLVVAGAGLVYLDAQVKAKFEGKRWALPAKVYARPLELFPGQNLSREDLKIELKGLGYQFTAQASQPGSAEWASSRARVYTRGFDFPDGPEDARKLLIEFRGDQLSAIRDASGRSLPLARLEPALIGGIYPRDNEDRDLIQLSEAPQHLVDALIAIEDRNYYNHYGVSPRGIARAMVANVKAKRFVQGGSTLTQQLIKNFYLSSERSLSRKLAEIPMAMLLDLHYSKDEILEAYLNEVYLGQEGARAIHGFGLASQYFFAQPIRELKLHQVALLAAMVKGPSYYDPRRHPQRAIQRRNLVLQVLQEQGNITAAERFKAEQQSLGVVKQQSLLKGAYPAYMDLVKRQLREEYPEEALSSEGLRVFTALDPIAQIRAERSLVEVVAKLQKRHGKPVKELEGSMVVSNPLSGEVLAVVGGRNTRYQGFNRALDALRPVGSLIKPAVYLTALEEGYTLSSIIEDEPVDVQLPNGDVWQPKNYSRSSHGLVPLHSALAHSYNQSTARLGLEVGTGKVVDMLKRLGLQRDVKAYPSMLLGSTALSPLEVAQLYQTIAGNGFQVPMRAIRMVTDSHNEELSRYPFSIMQTVAGGPVHLIQYALQEVVTEGTARSVYSRLPRELVVAGKTGTTNDQRDSWFAGFAGDRLAVVWLGLDDNKPLPLTGSSGALRVWTEFMKQSRPQPFMAERPEDIEYHWVEDATGLMSGEGCEGARQLPFIKGSEPQESSGCGDTIVSNPLELFKRWFRSE
SIO_010081: PT3_RS17645
subclass of: SO_0000673
so part of: PT3_RS17645
location: 50520..52865
location: region:50520-52865:1
so has part: feature:50520-52865:1:exon

WP_019623151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50520-52865:1:exon

PT3_RS17650
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17650
so part of: sequence
location: 52871..53425
location: region:52871-53425:1
so has part: feature:52871-53425:1:exon
subclass of: SO_0000010

position:52871:1
position: 52871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53425:1
position: 53425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52871-53425:1:exon

PT3_RS17650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17650
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIISTGLGLVFTSLLSGCIGGNANLSPTVEDRSVSGSEVAIDRNAGSGTAVATPVDTGQGFTVVTSEVAAPAPVTKRNPAVVALLDGARQQQNQGEYRAAQSSLERAQRIAPRDPQVYLQLADLRRQQGQYLQAEQLALKGLALARGRSGMERKLWFLIADIRTDGGDHQGAADARSRANLI
SIO_010081: PT3_RS17650
subclass of: SO_0000673
so part of: PT3_RS17650
location: 52871..53425
location: region:52871-53425:1
so has part: feature:52871-53425:1:exon

WP_019623152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52871-53425:1:exon

PT3_RS17655
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17655
so part of: sequence
location: complement(53478..53852)
location: region:53478-53852:-1
so has part: feature:53478-53852:-1:exon
subclass of: SO_0000010

position:53478:-1
position: 53478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53852:-1
position: 53852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53478-53852:-1:exon

PT3_RS17655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17655
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTFKKQQSNLAIAAQALYLLNLLALPGLSLLVLIGLFFKQQKNPDQLGRCHLYQATLLSLWGLVLLIGGGLPLWLLLGDSPAGITMTLLYLIVIHTGFVLLGIIGLAKAISGQHFHPCRKRCS
SIO_010081: PT3_RS17655
subclass of: SO_0000673
so part of: PT3_RS17655
location: complement(53478..53852)
location: region:53478-53852:-1
so has part: feature:53478-53852:-1:exon

WP_019623153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53478-53852:-1:exon

PT3_RS17660
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17660
so part of: sequence
location: 54015..54449
location: region:54015-54449:1
so has part: feature:54015-54449:1:exon
subclass of: SO_0000010

position:54015:1
position: 54015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54449:1
position: 54449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54015-54449:1:exon

PT3_RS17660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003113238.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c
translation: MNQTFTKSMARNIFYGGSLFFLLMLIGLSTHTVTVLPERDNRQNITPEVALGKKVWEDNNCIGCHTLLGEGAYFAPELGNVYERFGRSKEAIKGFIKSRPVDGIPGRRSMPQFNLSEEELDAIAEFLKYSSEIDTNNWPPNIQG
SIO_010081: PT3_RS17660
subclass of: SO_0000673
so part of: PT3_RS17660
location: 54015..54449
location: region:54015-54449:1
so has part: feature:54015-54449:1:exon

WP_019623154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54015-54449:1:exon

PT3_RS17665
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17665
so part of: sequence
location: 54459..55862
location: region:54459-55862:1
so has part: feature:54459-55862:1:exon
subclass of: SO_0000010

position:54459:1
position: 54459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55862:1
position: 55862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54459-55862:1:exon

PT3_RS17665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002927169.1
GO component: GO:0016021 - integral component of membrane [Evidence IEA]
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO process: GO:0009060 - aerobic respiration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cbb3-type cytochrome c oxidase subunit I
translation: MKYSSQSVAKPYFIAAIGLFVGQILFGVIMGLQYVIGDFMFPEIPFNVARMVHTNLLIVWLLFGFMGASYFMVPEESQTELYSPKLALILFWVFLVAGALTIVGYLAVPYATLAKITGNDLLPTMGREFLEQPTITKIGIVIVVLGFIFNIGMTILRGRKTVISMVLLMGLVGLAVFFLFSFYNPTNLVLDKMFWWWVVHLWVEGVWELILGSILAFTLIKITGVDREVIEKWLYIIIAMALITGLLGTGHHYFFIGTPDYWLWIGSVFSAMEPIPFFMMTLFAFNMVNKRRRQHPNRAATLWALGTGVMAFLGAGVWGFLHTLAPVNYYTHGSQITAAHGHMAFYGAYVMIVLTMISYAMPILNGRDAANSNKSQVVEMWGFWLMTVSMVFITLFLTGAGILQVYLQRYSETPQAFMVVQDQLAMFYWLREGAGLIFLIGLITYITSFFVKGEEARLTPAENVVSS
SIO_010081: PT3_RS17665
subclass of: SO_0000673
so part of: PT3_RS17665
location: 54459..55862
location: region:54459-55862:1
so has part: feature:54459-55862:1:exon

WP_019623155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54459-55862:1:exon

PT3_RS17670
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17670
so part of: sequence
location: 55914..56837
location: region:55914-56837:1
so has part: feature:55914-56837:1:exon
subclass of: SO_0000010

position:55914:1
position: 55914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56837:1
position: 56837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55914-56837:1:exon

PT3_RS17670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17670
inference: COORDINATES: protein motif:HMM:NF024211.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S binding protein
translation: MLQPQQLYRNLSRTAFFILFLIAPITDLFRYDLTEGHFILFGQPLGLGIDEAIAGATDTDAAFQILIRVLLPIVILVATGIWVAAKYGRLYCGWLCPHFSVVELINGLMQKLIGRPTVWEKGSKPHSGIAWLMLVCSSTLMALVWSIGLLGYLVPPGELYQDLLQMQLGGGSAIFISVATLVFLCDFLFARHLFCKFGCALGVMQSLLWMANPRALMVSFDSQRADLCKDCNSACDAACPMRLPARSIKRRKFTCTQCSECIHACNEVQKGNPEGGLLHWTPGDQRRNADRDRMIPVINIEKPNEDK
SIO_010081: PT3_RS17670
subclass of: SO_0000673
so part of: PT3_RS17670
location: 55914..56837
location: region:55914-56837:1
so has part: feature:55914-56837:1:exon

WP_019623156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55914-56837:1:exon

PT3_RS17675
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17675
so part of: sequence
location: 56837..57436
location: region:56837-57436:1
so has part: feature:56837-57436:1:exon
subclass of: SO_0000010

position:57436:1
position: 57436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56837-57436:1:exon

PT3_RS17675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006475581.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c oxidase subunit 3
translation: MTAAEIPQSTIEEKMLPGDFAVWLFILAELSVFALLFILYAITRARFPEMFAEGQANININAGLGNTLALLTSSYFVVAAQQALLKHLPKRAVWNIVLALLSACVYLTIKGYEYLHVAELGFGLSSNDFYFFYFGLTAFHMFHVILGMLVLIVLAIKVAKGVYHAERMNEFESGACYWHMVDLLWLILFPLVYVLHGGG
SIO_010081: PT3_RS17675
subclass of: SO_0000673
so part of: PT3_RS17675
location: 56837..57436
location: region:56837-57436:1
so has part: feature:56837-57436:1:exon

WP_019623157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56837-57436:1:exon

PT3_RS17680
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17680
so part of: sequence
location: 57440..57715
location: region:57440-57715:1
so has part: feature:57440-57715:1:exon
subclass of: SO_0000010

position:57440:1
position: 57440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57715:1
position: 57715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57440-57715:1:exon

PT3_RS17680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17680
inference: COORDINATES: protein motif:HMM:NF015582.2
GO component: GO:0016021 - integral component of membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome C oxidase subunit IV family protein
translation: MSKACRSTFAGLKLILLWLLLLILTIATALLAEPYTVTMGLVAIVLAVTAVKAKVLVDSFMGLKDAPLFWRAILLAYAPVLGVIITLTYAF
SIO_010081: PT3_RS17680
subclass of: SO_0000673
so part of: PT3_RS17680
location: 57440..57715
location: region:57440-57715:1
so has part: feature:57440-57715:1:exon

WP_019623158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57440-57715:1:exon

PT3_RS17685
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17685
so part of: sequence
location: 57736..58554
location: region:57736-58554:1
so has part: feature:57736-58554:1:exon
subclass of: SO_0000010

position:57736:1
position: 57736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58554:1
position: 58554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57736-58554:1:exon

PT3_RS17685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014238130.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CbbQ/NirQ/NorQ/GpvN family protein
translation: MSSVTQLDKQESLPFYEPQGDEVELFMHAYKHKLPVLIKGPTGCGKTRFISYMAEKLNLPLYTVACHDDLSASDLVGRHLIGDGATVWSDGPLTRAVREGGICYLDEVVEARKDTTVVIHPLTDDRRILPIDRTGETLHAPDNFMLVVSYNPGYQNLLKGMKPSTRQRFLSMSFDYLPAPAEVEVLLNETELDRSMAERLVVLANTLRELKDQDLEEGASTRLLVYTATLISTGFDPVKACRAGMIEPLTDDPDIVAGLMELVQAAFGSFEG
SIO_010081: PT3_RS17685
subclass of: SO_0000673
so part of: PT3_RS17685
location: 57736..58554
location: region:57736-58554:1
so has part: feature:57736-58554:1:exon

WP_019623159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57736-58554:1:exon

PT3_RS17690
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17690
so part of: sequence
location: 58597..60462
location: region:58597-60462:1
so has part: feature:58597-60462:1:exon
subclass of: SO_0000010

position:58597:1
position: 58597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60462:1
position: 60462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58597-60462:1:exon

PT3_RS17690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011311067.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VWA domain-containing protein
translation: MEEQVGQIWDRLITRIAQQGYPDAAVTLDQIKAPLGVFFRALGGDSALRVTATTATLHKARRNWLQRVAGSGRKVELAWQDETCLYLPAQLDVFPDAQLNRDLYFWLAAMAGARVPAETHRNQNWIVDNQQRTLYTLRQFRGLHQRYLSLVRAYSALRPQPEKLKPDAAAQERAIQQALTDPGSVGALPEARFAPDPVPLWLHPDPPRSAGLSNTADGQDRSASKGETRQAQQRRRQAERVEKPEDQGFTLGVRHEADLFSFGEFCKMDRGTDEEDDLDQAEDIANDIDKMSVAQDNTTVASRIKFDLDLPSEQEDDIPLSEGMLYPEWDFKKAQLLPDQCRVIPMLSRNAVDCELPEHLQKPARRLRRQFESLSARPQWIRGQYEGDKLDLDAYLDYRGAISSGGSAHAGDPRLYYQKRPLVRDMACLLLADLSLSTDAWVNDNHQVIDVIRDSVHLFAESLHASGDQFAIHGFSSRRREHVRFNCIKDFNENYNAKVRGRIADISPGFYTRMGAAIRHATDLLGKQSAEKKLLLLLTDGKPNDLDRYEGRYGVEDTRKAILEARNQGLIPFCITIDEEANQYLPYLFGHQGYTFIRQAEQLPKRLPQLYMTLTGKLFGG
SIO_010081: PT3_RS17690
subclass of: SO_0000673
so part of: PT3_RS17690
location: 58597..60462
location: region:58597-60462:1
so has part: feature:58597-60462:1:exon

WP_019623160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58597-60462:1:exon

PT3_RS17695
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17695
so part of: sequence
location: 60543..61226
location: region:60543-61226:1
so has part: feature:60543-61226:1:exon
subclass of: SO_0000010

position:60543:1
position: 60543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61226:1
position: 61226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60543-61226:1:exon

PT3_RS17695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17695
inference: COORDINATES: protein motif:HMM:NF012257.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Crp/Fnr family transcriptional regulator
translation: MQETRLQAIVREDVLFSSLTEKAKDNLCQHCHIIKLKNDETLFHQGGDAHSFYIVLEGNIKLYRVSPDGQTKVIEVIKKGGAFAEALMFMEQIRYPLNAAAMGACEVLAIPNKLYKETLLKEPQSALKLMGNMAVKLHRRINEIEILTLQNTRHRLGNYLFGLAPDPAAKQCVVQLPMAKQLIASQLGMQPETFSRLMKEMKLQGLIEVNGAEIRVNDLQGLLAFGH
SIO_010081: PT3_RS17695
subclass of: SO_0000673
so part of: PT3_RS17695
location: 60543..61226
location: region:60543-61226:1
so has part: feature:60543-61226:1:exon

WP_019623161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60543-61226:1:exon

PT3_RS17700
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17700
so part of: sequence
location: 61633..62097
location: region:61633-62097:1
so has part: feature:61633-62097:1:exon
subclass of: SO_0000010

position:61633:1
position: 61633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62097:1
position: 62097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61633-62097:1:exon

PT3_RS17700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17700
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLFLKPVMATLLVTGLISGCASNSNELKAAHVSTAGFKGLSCTELHAELQSSINVVNELTTVIDDKADDDKAQMAIGMILFWPALFALEGGDGIEAAEYSRMKGEINAMEEVAILNQCQSAIDVAQQYRAEEQKFRLAAKKPQASQQNNNTAY
SIO_010081: PT3_RS17700
subclass of: SO_0000673
so part of: PT3_RS17700
location: 61633..62097
location: region:61633-62097:1
so has part: feature:61633-62097:1:exon

WP_019623162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61633-62097:1:exon

PT3_RS17705
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17705
so part of: sequence
location: 62184..62663
location: region:62184-62663:1
so has part: feature:62184-62663:1:exon
subclass of: SO_0000010

position:62184:1
position: 62184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62663:1
position: 62663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62184-62663:1:exon

PT3_RS17705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012326585.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MENMTFTETREATLGFDQGLKKQIDVESVSGGEKTNPAWTSEISNENFSLALKRSLDHYGLFSAVGRYQLDVQMLDVDQPLFGLDMTVTTRVRYSLTDMESNRVVIDEIVSAPYTATVGEAFLGAERLRKANEGSGKKSIQFLLERLAELKIESVSLSE
SIO_010081: PT3_RS17705
subclass of: SO_0000673
so part of: PT3_RS17705
location: 62184..62663
location: region:62184-62663:1
so has part: feature:62184-62663:1:exon

WP_019623163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62184-62663:1:exon

PT3_RS17710
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17710
so part of: sequence
location: complement(63111..63734)
location: region:63111-63734:-1
so has part: feature:63111-63734:-1:exon
subclass of: SO_0000010

position:63111:-1
position: 63111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63734:-1
position: 63734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63111-63734:-1:exon

PT3_RS17710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17710
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLNLALGALLIGALFTAYQLQNSAQQLPDSPRTTLQAGALSALFIALSALAELLLNQASSDIETLQRMFANLAYYAALPLLASAMLVSTRNQHWQRAAWGRWLIGLFALFELLRRMEQGELYTQIIAVAVSATMLLAALMTKEKALQKANLLAGINMSITLLIAGPGALMPNTLPENSYLYPLLMAATLPLFAIAIKQTVLFHHKTA
SIO_010081: PT3_RS17710
subclass of: SO_0000673
so part of: PT3_RS17710
location: complement(63111..63734)
location: region:63111-63734:-1
so has part: feature:63111-63734:-1:exon

WP_019623164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63111-63734:-1:exon

PT3_RS17715
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: hemL
locus tag: PT3_RS17715
so part of: sequence
location: complement(63740..65029)
location: region:63740-65029:-1
so has part: feature:63740-65029:-1:exon
subclass of: SO_0000010

position:63740:-1
position: 63740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65029:-1
position: 65029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63740-65029:-1:exon

PT3_RS17715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: hemL
locus tag: PT3_RS17715
EC number: 5.4.3.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007018806.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate-1-semialdehyde 2,1-aminomutase
translation: MSRSESLFQAAQAHIPGGVNSPVRAFKGVGGTPIFFKRGEAAYLYDEDDKRYIDYIGSWGPMILGHAHPAVMNAVRGVMESGLGFGAPTAIEIEMADKVCDMMPGMDLVRMVNSGTEATMSAIRLARGYTNRDKIVKFEGCYHGHSDSLLVKAGSGMLTLGEPSSPGVPASLAEHTITLTYNDLDNVRQAFAEAGADIACIIVEPVAGNMNCIPPVPGFLEGLREICDEYGTVLILDEVMTGFRVSLTGAQGHYGVIPDLTTLGKVIGGGLPVGAFGGKREIMEYIAPLGPVYQAGTLSGNPLAMAAGLAMLNALEEEGFHEKLSAKTELLAQGFEAMALRHGVPFTTSQVGGMFGLFFTDQPEVTRFDQVMKCDADKFGRFFHGMLEEGIYLAPSAFEAGFMSQAHTEEDINATIEAAGRVFAKLAAE
SIO_010081: PT3_RS17715
subclass of: SO_0000673
so part of: PT3_RS17715
location: complement(63740..65029)
location: region:63740-65029:-1
so has part: feature:63740-65029:-1:exon

WP_019623165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63740-65029:-1:exon

PT3_RS17720
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: thiE
locus tag: PT3_RS17720
so part of: sequence
location: complement(65063..65692)
location: region:65063-65692:-1
so has part: feature:65063-65692:-1:exon
subclass of: SO_0000010

position:65063:-1
position: 65063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65692:-1
position: 65692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65063-65692:-1:exon

PT3_RS17720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: thiE
locus tag: PT3_RS17720
EC number: 2.5.1.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020580890.1
GO function: GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine phosphate synthase
translation: MKEFQLQGLYAITDSTLMPDTETMLYQVENALRGGASIIQYRDKSDNYPQRLAQAKALADLCHQFQRPLLINDDIELAKASNADGVHLGQSDGNIRQARDYLGSAAIIGNTCHSSLTLAVKACQQSADYVAFGAFFRSSTKPDATPAPIHLLSEARSTLPVPVVAIGGINMDNAGQVISAGADMIAVIHSLFASDDICAQAGQFDSLFD
SIO_010081: PT3_RS17720
subclass of: SO_0000673
so part of: PT3_RS17720
location: complement(65063..65692)
location: region:65063-65692:-1
so has part: feature:65063-65692:-1:exon

WP_019623166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65063-65692:-1:exon

PT3_RS17725
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17725
so part of: sequence
location: complement(65740..67485)
location: region:65740-67485:-1
so has part: feature:65740-67485:-1:exon
subclass of: SO_0000010

position:65740:-1
position: 65740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67485:-1
position: 67485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65740-67485:-1:exon

PT3_RS17725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007021152.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chloride channel protein
translation: MFKDSLSFTHFRNRLAHQEALPQLILLGIFSGLATGLVILAFRLIIELPLETWLPDNNSENFEGLPLWLRFVLPIAGSIVTFLLLWKLLPATRKVGVVHVLERLSYHQGHLPAKNMLVQFFGAAIAIVSGHSVGREGPAIHLGAACGSLVGQTLKLPNNSLRLLVGCGVAAAISAAFNTPLAGVIFAMEVILMEYTVIGFTPVLVASVTAALLIRVTHGDESIFTIPALQIQSLAEIPFVVLLGIICALLAAGFIRIMILTQKITSVSLGVKLLIAGLLTGTVALWYPQVMGLGYDTLSQVLQGNAGLTLLLGLLLTKWLLTPIVLGLGIPGGLIGPTIYIGAIAGAAFAVLVAHFTGETNSGVGFYAMLGMGAMMGAVLNAPLAALIALLELTGNPNIIFPGMIAIVVASTTVRFFFNQPSIFLTSLKAQGLDYRQEPITQALSRLGVASVMCASHVRCNTRVSCESAIKVLEQRPDWLILEDKKAVPRYILFPADLEYFIDRISERDGFNPNLELDLTEVPAVRKDIAPLPIQATLKEALDKMNLDRLDALYIVHHNDEIAGIITRDLVEHFYTQKINQ
SIO_010081: PT3_RS17725
subclass of: SO_0000673
so part of: PT3_RS17725
location: complement(65740..67485)
location: region:65740-67485:-1
so has part: feature:65740-67485:-1:exon

WP_019623167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65740-67485:-1:exon

PT3_RS17730
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: argC
locus tag: PT3_RS17730
so part of: sequence
location: 67606..68637
location: region:67606-68637:1
so has part: feature:67606-68637:1:exon
subclass of: SO_0000010

position:67606:1
position: 67606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68637:1
position: 68637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67606-68637:1:exon

PT3_RS17730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: argC
locus tag: PT3_RS17730
EC number: 1.2.1.38
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017902853.1
GO function: GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO process: GO:0006592 - ornithine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetyl-gamma-glutamyl-phosphate reductase
translation: MIKVGIVGGTGYTGVELLRLLANHSGVSVEVITSRSEEGVRIDDMYPNLRGHYDLQFTVPDVEALSECEAVFFATPHGVAMKMAPELVERGVKVIDLGADFRIKDLELWSQWYGMEHTSPELAAKAVYGLPEVNREAIKGAQMLACPGCYPTATQLGFLPLIENKLIDHRRLIADVKSGVSGAGRGANIGSLLCESSESMKAYAVAGHRHLPEIKQGLSEAAGRPVGLTFVPHLTPMIRGIHATLYGKLKDPTDGLQELFEARYADEPFVDVMPAGSHPETRSVKGANICRISVFRPQNDDTVVVLSAIDNLVKGAAGQAIQNMNIMFGLDEAEGLKHAGMMP
SIO_010081: PT3_RS17730
subclass of: SO_0000673
so part of: PT3_RS17730
location: 67606..68637
location: region:67606-68637:1
so has part: feature:67606-68637:1:exon

WP_019623168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67606-68637:1:exon

PT3_RS17735
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: erpA
locus tag: PT3_RS17735
so part of: sequence
location: 68722..69072
location: region:68722-69072:1
so has part: feature:68722-69072:1:exon
subclass of: SO_0000010

position:68722:1
position: 68722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69072:1
position: 69072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68722-69072:1:exon

PT3_RS17735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: erpA
locus tag: PT3_RS17735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020683598.1
GO function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-sulfur cluster insertion protein ErpA
translation: MTETTDQQLTMVFSDSAAAKVKTLIEEDQNDNLKLRVYITGGGCAGFSYGFTFDEAVADDDTLFENDGVNMVVDPMSYQYLVGSVVDYKEGLQGSQFVIDNPNATTTCGCGSSFSI
SIO_010081: PT3_RS17735
subclass of: SO_0000673
so part of: PT3_RS17735
location: 68722..69072
location: region:68722-69072:1
so has part: feature:68722-69072:1:exon

WP_026340266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68722-69072:1:exon

PT3_RS17740
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17740
so part of: sequence
location: complement(69137..70246)
location: region:69137-70246:-1
so has part: feature:69137-70246:-1:exon
subclass of: SO_0000010

position:69137:-1
position: 69137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70246:-1
position: 70246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69137-70246:-1:exon

PT3_RS17740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17740
EC number: 2.7.1.170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008251316.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO process: GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009254 - peptidoglycan turnover [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anhydro-N-acetylmuramic acid kinase
translation: MSAQIYIGLMSGTSLDSIDAVAVRFEPSFELIASHSEPIPPAIDNRIRVLFNPGDNEIDQLGNLDLELGELFASAANTLIEHHGLSRDQIIAIGSHGQTIRHRPETHFTLQIGDPNTIAEHTGITTVADFRCRDMAAGGQGAPLVPAFHNGLFRHSQKNRILVNIGGMANLTIIEADPEKPVLGYDTGPGNVLMDSWIQHHQQKNYDADGQWANTGKVIPELLNAMLSLPYFSETPPKSTGREQFNPLWIEQNIRSLASTPEPSDVQATLLELTAITIADAINRHQLDNLQVFLCGGGSHNRQLRARLSTLLQPHYLSDTAELGLDPDWVEAAAFAWLAYRTLNKESGNIPEVTGAKGFRPLGAIYWGS
SIO_010081: PT3_RS17740
subclass of: SO_0000673
so part of: PT3_RS17740
location: complement(69137..70246)
location: region:69137-70246:-1
so has part: feature:69137-70246:-1:exon

WP_019623170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69137-70246:-1:exon

PT3_RS17745
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17745
so part of: sequence
location: complement(70287..71666)
location: region:70287-71666:-1
so has part: feature:70287-71666:-1:exon
subclass of: SO_0000010

position:70287:-1
position: 70287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71666:-1
position: 71666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70287-71666:-1:exon

PT3_RS17745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020683600.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidoglycan DD-metalloendopeptidase family protein
translation: MVLIERLKQHLPATHLIAVAICCVIVGLTSMLMPSAEAPASVLAQAESTEKSTTSITDGNQTALVNKASSAEPVKLPVETAKKPLEQAPSEITEQWQDFKVRSGDTLTSIFKRAGLTNRDAFLVSKGVQGTEALKRIYPGQIIRFVIEDNQLIKLLHIRNQLESSLVTITAQGYEVETIAKQPDISPRFAEGSIENSLFYDASQAGLSDRMIMELAAIFGWDIDFVLDLRQGDRFNLVFEEKYLDGKLIGEGNILSAQFINQGETYTAVRYTDSEGNSSYYTPEGDSMRKAFLRSPVSFARISSSFKNRRKHPVLGLTRAHKGTDYAARTGTPIKAAGDGKIIWRGTKGGYGKAVIVQHGGNITTLYGHMNNYRRGQKSGSRVSQGDVIGYVGQTGLASGPHLHYEFRVNGVHKNPQTVKLPHAAPIAKAEKDNFFAAAKASLAQLEQFKATQLASASN
SIO_010081: PT3_RS17745
subclass of: SO_0000673
so part of: PT3_RS17745
location: complement(70287..71666)
location: region:70287-71666:-1
so has part: feature:70287-71666:-1:exon

WP_019623171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70287-71666:-1:exon

PT3_RS17750
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: tyrS
locus tag: PT3_RS17750
so part of: sequence
location: 72002..73300
location: region:72002-73300:1
so has part: feature:72002-73300:1:exon
subclass of: SO_0000010

position:72002:1
position: 72002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73300:1
position: 73300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72002-73300:1:exon

PT3_RS17750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: tyrS
locus tag: PT3_RS17750
EC number: 6.1.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020287241.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine--tRNA ligase
translation: MTDKTLLQDLNARGLIAQMTSEEELEQHLAEGSVTLYCGFDPTADSLHIGSLVPLLALKRFQQAGHKPLALVGGATGLIGDPSFKAQERKLNDDSTVANWVEKLKGQVSQFIDFDSGDNNAEVVNNLDWTRDLDVLTFLRDVGKHFSVNQMIAKESVKQRIDREGEGISFTEFTYMILQSFDYQQLNASHNCTLQIGGSDQWGNITGGTELTRRMNGNKAFGLTLPLITKSDGTKFGKTESGTIWLSPNKTSPYAFYQFWLQTADADAYSFLKYFTFLSVEEIDALEKADAERDGRPEAQSVLAREVTRLVHGEEGLTAAMRITDALFSGNLSDLSQADFEQLQLDGLPSSSLAAADLAETPLTTLLSDAGMANSGKQIKDALQRNAVIVNGVEKGMDDNMKAVEVFAAANGTYGRFFLVKLGKKKHHLFVI
SIO_010081: PT3_RS17750
subclass of: SO_0000673
so part of: PT3_RS17750
location: 72002..73300
location: region:72002-73300:1
so has part: feature:72002-73300:1:exon

WP_019623172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72002-73300:1:exon

PT3_RS17755
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17755
so part of: sequence
location: complement(73388..73654)
location: region:73388-73654:-1
so has part: feature:73388-73654:-1:exon
subclass of: SO_0000010

position:73388:-1
position: 73388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73654:-1
position: 73654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73388-73654:-1:exon

PT3_RS17755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007021254.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTATIKNKERAIDELVSVLRKIFEEPEICAAAMEIARKHLQDEHANVKIADELSATTSVKIPVEHSEADTLFLDMLKDLVRDEQALY
SIO_010081: PT3_RS17755
subclass of: SO_0000673
so part of: PT3_RS17755
location: complement(73388..73654)
location: region:73388-73654:-1
so has part: feature:73388-73654:-1:exon

WP_019623173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73388-73654:-1:exon

PT3_RS17760
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17760
so part of: sequence
location: 74072..75793
location: region:74072-75793:1
so has part: feature:74072-75793:1:exon
subclass of: SO_0000010

position:74072:1
position: 74072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75793:1
position: 75793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74072-75793:1:exon

PT3_RS17760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007021255.1
GO function: GO:0003984 - acetolactate synthase activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO process: GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetolactate synthase 3 large subunit
translation: MEQLSGGEMVIRALKDEGVKHIYGYPGGALLHIYDALFRQEDVQHVLVRHEQAATHMADAYARATGKAGVALVTSGPGATNAVTGIATAYMDSIPMVVITGQVMSFLIGEDAFQETDMIGVSRPVVKHSFSVQNPEDIPTIIKKAFHIAESGRPGPVVVDIPKDMTAPTDRFDYEYPKSVKMRSYNPVSRGHSGQIKKAMDMVLDAKRPVIYSGGGVIMGDASAELTELAQLLNAPVTNTLMGLGGYPGTDRQFIGMLGMHGSYEANMAMHHADLILAVGARFDDRVTNGVDKFCPTAKIIHVDIDPASISKTIKADVPIVGPAKHVLQEMTSLVKSSKKQLEKEAIDSWWQQIDEWRGRHGGRFRTDDSESMKPQQVIEMLSKVTGGDAYVCSDVGQHQMFAAQYYKFNKPNRWINSGGLGTMGFGLPAAMGVKMNFPDEEVVCVTGEGSIQMNIQELSTISQYDIPLKVICLNNGSLGMVRQWQDMNYESRHSQSYMESLPDFVKLVEAYGHVGMKVEKYEDLEAAMTEAFALKDRMVFMDITVDPFEHVYPMQVPRGSMRDMWLSKTERT
SIO_010081: PT3_RS17760
subclass of: SO_0000673
so part of: PT3_RS17760
location: 74072..75793
location: region:74072-75793:1
so has part: feature:74072-75793:1:exon

WP_019623174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74072-75793:1:exon

PT3_RS17765
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: ilvN
locus tag: PT3_RS17765
so part of: sequence
location: 75796..76287
location: region:75796-76287:1
so has part: feature:75796-76287:1:exon
subclass of: SO_0000010

position:75796:1
position: 75796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76287:1
position: 76287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75796-76287:1:exon

PT3_RS17765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: ilvN
locus tag: PT3_RS17765
EC number: 2.2.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008940823.1
GO function: GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO process: GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetolactate synthase small subunit
translation: MRHIISVLMENEPGALSRVVGLFAQRNFNIESLTVAPTEDSTLSRLTVTTFGSDKVIEQITKQLNKLIDVVKVVDLTEGEHIERELMMIKLKANGQMRAEIKRTADIFRGQIIDVTPNTYTVQLTGASDKLDAFIETLGTAHIMEVVRTGVSGLSRGEKVLSL
SIO_010081: PT3_RS17765
subclass of: SO_0000673
so part of: PT3_RS17765
location: 75796..76287
location: region:75796-76287:1
so has part: feature:75796-76287:1:exon

WP_019623175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75796-76287:1:exon

PT3_RS17770
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17770
so part of: sequence
location: 76549..76746
location: region:76549-76746:1
so has part: feature:76549-76746:1:exon
subclass of: SO_0000010

position:76549:1
position: 76549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76746:1
position: 76746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76549-76746:1:exon

PT3_RS17770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17770
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIYSVKWVVLSVLLVFPLGELTGRDSGVQFSGIVRYERLPLWQQSNPFPRWQDTYAVVFEQEMLA
SIO_010081: PT3_RS17770
subclass of: SO_0000673
so part of: PT3_RS17770
location: 76549..76746
location: region:76549-76746:1
so has part: feature:76549-76746:1:exon

WP_019623176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76549-76746:1:exon

PT3_RS17775
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: phnN
locus tag: PT3_RS17775
so part of: sequence
location: 76863..77447
location: region:76863-77447:1
so has part: feature:76863-77447:1:exon
subclass of: SO_0000010

position:76863:1
position: 76863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77447:1
position: 77447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76863-77447:1:exon

PT3_RS17775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: phnN
locus tag: PT3_RS17775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007019999.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0019634 - organic phosphonate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN
translation: MSGKLLYLVGASGSGKDSLLEGCRQRLQPSHGCFVAHRYITRALNVGGENHIHLSPDEFDMRASMGMFAMQWYSHGYSYGIGSEIDNWLAKGVNVVINGSREYLQIAMHAYPNLIPVLVEVDEDTLHQRLTQRGRENEEEIIKRLNRHRQIVDSLPDNIQLIDNNANLQDGVDALLKLVESMAPDSVKPARSTH
SIO_010081: PT3_RS17775
subclass of: SO_0000673
so part of: PT3_RS17775
location: 76863..77447
location: region:76863-77447:1
so has part: feature:76863-77447:1:exon

WP_019623177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76863-77447:1:exon

PT3_RS17780
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17780
so part of: sequence
location: 77511..77900
location: region:77511-77900:1
so has part: feature:77511-77900:1:exon
subclass of: SO_0000010

position:77511:1
position: 77511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77900:1
position: 77900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77511-77900:1:exon

PT3_RS17780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005492551.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-CoA thioesterase
translation: MFSIEMGVRDYELDMQGIVNNGVYFNYLEHARHEFLLNSGIDFAVLTEAGIHLVVIRSELDYKASLKSGDKFRVEVALERISRVKFGFRQRVVRIEDEKVCVAGLVIGAALNERGRPYISPELEALFSA
SIO_010081: PT3_RS17780
subclass of: SO_0000673
so part of: PT3_RS17780
location: 77511..77900
location: region:77511-77900:1
so has part: feature:77511-77900:1:exon

WP_019623178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77511-77900:1:exon

PT3_RS17785
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17785
so part of: sequence
location: 77897..78787
location: region:77897-78787:1
so has part: feature:77897-78787:1:exon
subclass of: SO_0000010

position:77897:1
position: 77897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78787:1
position: 78787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77897-78787:1:exon

PT3_RS17785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006965219.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MIKTTFDRRAILLLVGLCMLFGLNQVVVKFGLEGISPLLQAGLRSVGAALLLMLWMLWRGEKIFYRDGTFWWGVLLGVLFAIEFLLIYLALDLTTASHTTIFLYTSPFVVALGAHFFVQGEHLRSVQVMGLLVAFAGVIFAFRDSLEGDATLLGDSLALAAALFWGATTVVLKASPQRHLSASRVLLYQLVVSAVILPLLSWLLNEPGVTNLTPLVVGSLLFQIVLMAFVGYLAWFWLLSHYPASKIASFTFLTPLFGVLLAWLILDERLSLDMLGALLLVALGIFLVNKPTGKRI
SIO_010081: PT3_RS17785
subclass of: SO_0000673
so part of: PT3_RS17785
location: 77897..78787
location: region:77897-78787:1
so has part: feature:77897-78787:1:exon

WP_026340268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77897-78787:1:exon

PT3_RS17790
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: ilvY
locus tag: PT3_RS17790
so part of: sequence
location: complement(78823..79695)
location: region:78823-79695:-1
so has part: feature:78823-79695:-1:exon
subclass of: SO_0000010

position:78823:-1
position: 78823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79695:-1
position: 79695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78823-79695:-1:exon

PT3_RS17790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: ilvY
locus tag: PT3_RS17790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011505811.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HTH-type transcriptional activator IlvY
translation: MDTRSLKLFISLCDTLHFGRASEACHISPSALTRAIKQLEDSLGVQLFERDNRTVSLTREGQNFQDYAREALIQWDVVRNSLLADAQELQGEISVYCSVTASYSFLYDILSDFRRQHPKIEIKLHTGDPENAIQRVLAGTDDITIAARPDTLNAGLAFKHIATSPLVFIAPQKDIHLDPLLTDTPDWSQVPMILSEEGVSRKRIDRWFKARQAKPIIYAQVAGNEAIVSMVSLGFGVGVVPKIVLDNSPLADRVRILNIKPELKAYDVGLFALKKKLQSPLIEAFWSQIQ
SIO_010081: PT3_RS17790
subclass of: SO_0000673
so part of: PT3_RS17790
location: complement(78823..79695)
location: region:78823-79695:-1
so has part: feature:78823-79695:-1:exon

WP_019623180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78823-79695:-1:exon

PT3_RS17795
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: ubiM
locus tag: PT3_RS17795
so part of: sequence
location: 79923..81128
location: region:79923-81128:1
so has part: feature:79923-81128:1:exon
subclass of: SO_0000010

position:79923:1
position: 79923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81128:1
position: 81128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79923-81128:1:exon

PT3_RS17795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: ubiM
locus tag: PT3_RS17795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010504360.1
GO function: GO:0071949 - FAD binding [Evidence IEA]; GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen [Evidence IEA]
GO process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-demethoxyubiquinol-8 5-hydroxylase UbiM
translation: MKYDIVIIGAGPAGLSFARSLGDTALKVLVVERSSLETLRQPPEDGREIALTHLSIDMMKNSGAWQQLADQDVSPICAAKVLDGDSSYTLNFDNTEANLDALGYLVPNDKIRKAYYEVVEPIDNVELLTEVSVEDVGSTADSAWVVLSNGDRVECDLLVSADSRFSETRRKMGVPASMKDFSRTAIVCRMEHSLPHNQTAFECFHYGRTLAILPMTGNLSSIVVTVSSAEAESIFNMGEEAFAADIEQRLQGQLGSMKLYGRRHLYPLVAVHANKFVSRRFAVIGDAAVGMHPVTAHGFNLGLRSQETLTKEIKKALEQGREIGSFSVLEKYQSTHMRVTKPLYMGTNLVVGLFTNDNFAAKIARKATLRIANNFAPLKQIITRKLTEKRIDIPFFLPGLK
SIO_010081: PT3_RS17795
subclass of: SO_0000673
so part of: PT3_RS17795
location: 79923..81128
location: region:79923-81128:1
so has part: feature:79923-81128:1:exon

WP_019623181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79923-81128:1:exon

PT3_RS17800
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17800
so part of: sequence
location: 81242..82012
location: region:81242-82012:1
so has part: feature:81242-82012:1:exon
subclass of: SO_0000010

position:81242:1
position: 81242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82012:1
position: 82012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81242-82012:1:exon

PT3_RS17800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007021335.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type 1 glutamine amidotransferase
translation: MNRLDATSSDTRNRDQLKILLLQIRDGAQVRMEEHLSFAEYCGVALEQIDILNVFDTPDFPVSAADNYDALLVGGASEANVLKPDQFPFIQACQNLIRHCGETAKPVFASCFGFQLAVLALGGEILHKDAGFEMGTIPVSLTSAAVDDLLFQDTPDGFSAISVHRQYADGLPGDCQLLAYTEQCAHSFKLKGKPFWAFQFHPEVDKATLIERLTFYKSHYTDGDGQLDRVLSSAVETPESNILVRKFVDRVLLKQT
SIO_010081: PT3_RS17800
subclass of: SO_0000673
so part of: PT3_RS17800
location: 81242..82012
location: region:81242-82012:1
so has part: feature:81242-82012:1:exon

WP_019623182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81242-82012:1:exon

PT3_RS17805
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: pssA
locus tag: PT3_RS17805
so part of: sequence
location: 82095..82874
location: region:82095-82874:1
so has part: feature:82095-82874:1:exon
subclass of: SO_0000010

position:82095:1
position: 82095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82874:1
position: 82874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82095-82874:1:exon

PT3_RS17805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: pssA
locus tag: PT3_RS17805
EC number: 2.7.8.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015047075.1
GO function: GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity [Evidence IEA]
GO process: GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDP-diacylglycerol--serine O-phosphatidyltransferase
translation: MNDPQGNKPEQPEQPGQEESNPKPRSRGIYLLPNLFTTGALFCGFYAVVAGMNGAFDNAAIAIFVAMVLDGLDGRVARLTNTSSAFGAEYDSLSDMVSFGVAPALVTFSWALSGAGKFGWFCAFIYVAGAALRLARFNTQIGSVDKRYFMGLPSPAAAASVAGLVWACVEFNLDVSGYIYLIAIYVALVGVLMVSNVLYYSFKDVDPKGKIPFMILLVIVLTIGVISISPPIFLWLLILGYTLSGPVLWLLRKRKSLIN
SIO_010081: PT3_RS17805
subclass of: SO_0000673
so part of: PT3_RS17805
location: 82095..82874
location: region:82095-82874:1
so has part: feature:82095-82874:1:exon

WP_019623183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82095-82874:1:exon

PT3_RS17810
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: msrP
locus tag: PT3_RS17810
so part of: sequence
location: 82910..83932
location: region:82910-83932:1
so has part: feature:82910-83932:1:exon
subclass of: SO_0000010

position:82910:1
position: 82910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83932:1
position: 83932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82910-83932:1:exon

PT3_RS17810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: msrP
locus tag: PT3_RS17810
EC number: 1.8.5.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007641868.1
GO function: GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0016667 - oxidoreductase activity, acting on a sulfur group of donors [Evidence IEA]
GO process: GO:0030091 - protein repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein-methionine-sulfoxide reductase catalytic subunit MsrP
translation: MSKRLIRDALNIPSSEITSESVYKQRRRLMQAALSAAVLPAFAFPSFARAAGYEIPDDLPRYPGPVWLRQKLASAVRNAELSVSDELAPYYHAITHNNFYEFGTDKRDPVRYAQKFKTDPWKVEISGEVAKPGNYNLEDILAPHALEDRVYRLRCVEAWSMVIPWLGFPLAELIKRFEPTSKAKYVQFTTILDKEQMSEQRSSFGTIDWPYVEGLRMDEAMNPLTLMAVGMYGNALPPQNGAPLRLVVPWKYGFKSIKSIVRIHFSETMPETSWNITAPKEYGFYANVNPAVDHPRWSQATERRLPSSLLSPNIVDTLPFNGYADQVAHLYKGMDLSKWF
SIO_010081: PT3_RS17810
subclass of: SO_0000673
so part of: PT3_RS17810
location: 82910..83932
location: region:82910-83932:1
so has part: feature:82910-83932:1:exon

WP_019623184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82910-83932:1:exon

PT3_RS17815
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17815
so part of: sequence
location: 83977..84522
location: region:83977-84522:1
so has part: feature:83977-84522:1:exon
subclass of: SO_0000010

position:83977:1
position: 83977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84522:1
position: 84522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83977-84522:1:exon

PT3_RS17815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020682591.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein-methionine-sulfoxide reductase heme-binding subunit MsrQ
translation: MLCLSPLAALFVNLLDDNLGADPAKIIVKELGFWAITLLWLTLAVTPVRKLLGWRWLMSFRRMLGLYTFFYAVLHLLAFATFLIGWRWDILLTELTKRPYIVVGALALLLLIPLTLTSTKAMQRRLGKHWKKLHSLIYPISLLVMLHFVWQIRSDFGQQFIFAIILAILLGYRLYLKGRSS
SIO_010081: PT3_RS17815
subclass of: SO_0000673
so part of: PT3_RS17815
location: 83977..84522
location: region:83977-84522:1
so has part: feature:83977-84522:1:exon

WP_236588731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83977-84522:1:exon

PT3_RS17820
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: coxB
locus tag: PT3_RS17820
so part of: sequence
location: 84983..86095
location: region:84983-86095:1
so has part: feature:84983-86095:1:exon
subclass of: SO_0000010

position:84983:1
position: 84983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86095:1
position: 86095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84983-86095:1:exon

PT3_RS17820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: coxB
locus tag: PT3_RS17820
EC number: 7.1.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007021338.1
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c oxidase subunit II
translation: MRRNGRALLFAGLFYAPLVSADWQVNLIEGATEISRSVYNLHMVIFYICVAIAVIVFGVMFWSIFWHRKSRGAKAAHFHESTWVEIAWTIVPVIILVSMAVPASTTLIQMYDKNSAELDIQITGYQWKWRYQYLNQDIDFFSSLSTPPEQISNEQIKGENYLLEVDKPLVIPAGKKIRFLLTSNDVIHSWWVPALAVKKDAIPGFVNESWTRVDQPGIYRGQCAELCGRDHGFMPIVVEVKSPEDYQMWVAEQASLKVVEQQSAQKEWSQAELMIRGEAVYKASCAACHQLEGQGIPGVFPALVGSPLMSGDSAEHIDAVLHGRSGTAMQAFAEQLNTVDLAAVITYERSAWGNQGGAVTVQQIAELLKE
SIO_010081: PT3_RS17820
subclass of: SO_0000673
so part of: PT3_RS17820
location: 84983..86095
location: region:84983-86095:1
so has part: feature:84983-86095:1:exon

WP_040405092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84983-86095:1:exon

PT3_RS17825
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: ctaD
locus tag: PT3_RS17825
so part of: sequence
location: 86100..87704
location: region:86100-87704:1
so has part: feature:86100-87704:1:exon
subclass of: SO_0000010

position:86100:1
position: 86100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87704:1
position: 87704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86100-87704:1:exon

PT3_RS17825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: ctaD
locus tag: PT3_RS17825
EC number: 7.1.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010321597.1
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c oxidase subunit I
translation: MGSIEQSVQSTDHHGPAKGITRWLYTTNHKDIGTLYLLFSLTMFFIGGCMALTIRAELFQPGLQLIMPEFFNQMTTMHGLIMVFGAVMPAFVGLANWMIPMMVGAPDMALPRMNNWSFWILPFAFSMMLSTLLMEGGAPNFGWTFYAPLSTTYAPPSVTFFIFAVHMMGISSIMGAINVIATILNMRVPGMKLMDMPLFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFDAAGGGDPVLFQHVFWFFGHPEVYIMILPAFGVVSEIIPTFARKRLFGYASMVYATASIAILSFIVWAHHMFTVGLPLVGELFFMYTTMLIAVPTGVKVFNWVATMFRGSMTFETPMLFSLAFVVLFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPGSVFSIMAAAYFWLPKWTGHMYNEAMGKLHFWLSFIGVNVTFFPMHFLGLAGMPRRIPDYALQFADFNMVATFGAFLFGFSQLIFVYNVISCIRSGKKATAQVWEGSHGLEWTLSSPPPYHSFTEPPAFTSPHRANG
SIO_010081: PT3_RS17825
subclass of: SO_0000673
so part of: PT3_RS17825
location: 86100..87704
location: region:86100-87704:1
so has part: feature:86100-87704:1:exon

WP_019623187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86100-87704:1:exon

PT3_RS17830
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17830
so part of: sequence
location: 87713..88294
location: region:87713-88294:1
so has part: feature:87713-88294:1:exon
subclass of: SO_0000010

position:87713:1
position: 87713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88294:1
position: 88294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87713-88294:1:exon

PT3_RS17830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007021340.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c oxidase assembly protein
translation: MSQLQRRNRSLITRLIAGTVLMFGFGFLLVPLYDVFCRVTGLNGKVLNNGPVAQVVEMNPERRVRVQLLAVNNEAMPWRFQPDQPEISVFPGEMKQTAFMAFNPTRRSMVGQAVPSVAPSEAAAHLHKVNCFCFEQQPLMAGEQRAMPLVFMVDNELPLHISTITLSYTLFDITPEPRPVLTLQQHRQGESYE
SIO_010081: PT3_RS17830
subclass of: SO_0000673
so part of: PT3_RS17830
location: 87713..88294
location: region:87713-88294:1
so has part: feature:87713-88294:1:exon

WP_019623188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87713-88294:1:exon

PT3_RS17835
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17835
so part of: sequence
location: 88287..89171
location: region:88287-89171:1
so has part: feature:88287-89171:1:exon
subclass of: SO_0000010

position:88287:1
position: 88287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89171:1
position: 89171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88287-89171:1:exon

PT3_RS17835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17835
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010321595.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c oxidase subunit 3
translation: MSSQAYYVPAQSRWPILASVSLFLMAYGAGTLINALSADSGGLLGLGFLLLGALSMGLILVGWFGHVIDESGQGLYSDQMDRSFRWGMSWFIFSEVMFFAAFFGTLFYVRILAVPWLGGEGEKGVSNMLWQGFKATWPLMSTPDMKAFPGPKGLIDPLHLPLINTLLLLSSSVTVTVAHYRLKQDRRPQVILWLLLTVVLGCAFLVFQALEYIEAYHELGLTLQAGIYGATFFILTGFHGMHVTLGTLMLLIILLRVIRGHFAPDHHFGFEAVSWYWHFVDVIWVGLFLFVYLL
SIO_010081: PT3_RS17835
subclass of: SO_0000673
so part of: PT3_RS17835
location: 88287..89171
location: region:88287-89171:1
so has part: feature:88287-89171:1:exon

WP_019623189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88287-89171:1:exon

PT3_RS17840
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17840
so part of: sequence
location: complement(89166..89417)
location: region:89166-89417:-1
so has part: feature:89166-89417:-1:exon
subclass of: SO_0000010

position:89166:-1
position: 89166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89417:-1
position: 89417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89166-89417:-1:exon

PT3_RS17840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17840
inference: COORDINATES: protein motif:HMM:NF022587.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: twin transmembrane helix small protein
translation: MLKTLIVLIFIFIIISLFVGLYFLLQDQSRSHRTVKSLVLRVSLAIFLLLIILIGVYSGELKLRTPFPVLPASDQPSSQQSSL
SIO_010081: PT3_RS17840
subclass of: SO_0000673
so part of: PT3_RS17840
location: complement(89166..89417)
location: region:89166-89417:-1
so has part: feature:89166-89417:-1:exon

WP_019623190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89166-89417:-1:exon

PT3_RS17845
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17845
so part of: sequence
location: 89439..90152
location: region:89439-90152:1
so has part: feature:89439-90152:1:exon
subclass of: SO_0000010

position:89439:1
position: 89439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90152:1
position: 90152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89439-90152:1:exon

PT3_RS17845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17845
inference: COORDINATES: protein motif:HMM:NF014193.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SURF1 family protein
translation: MSKAQGVPLSKLLIGTLALLFIPLLTGLGLWQLERAEEKRQLLNQWNSVPEVLNELPRPEGANGLRVSLSGRFNTDVIYLLDNRTRNGRSGYEVIMPFIPEGSSVTALVNLGWIAASSYREELPQIAFPIEVRRVTGRVVTPKRVMQLSPDYWGLDEAVRIQQLDMLRLAERHPGLYPAVIRSDTALLPELTVGWQVVNITPDRHLGYAVQWFGLAIVLLSGCVWLALHQDKGGTYG
SIO_010081: PT3_RS17845
subclass of: SO_0000673
so part of: PT3_RS17845
location: 89439..90152
location: region:89439-90152:1
so has part: feature:89439-90152:1:exon

WP_019623191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89439-90152:1:exon

PT3_RS17850
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17850
so part of: sequence
location: 90145..90597
location: region:90145-90597:1
so has part: feature:90145-90597:1:exon
subclass of: SO_0000010

position:90145:1
position: 90145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90597:1
position: 90597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90145-90597:1:exon

PT3_RS17850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17850
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGSRQFPRTIFWLVWAVALVPLLVASLSFFSGWRPDQQISQGELYQPGVRLEDLRLSEYQVEGSWQLILLVGQQCNTECLNWQSLLPGLHTSLGKDRDRLRLQQIKTGQLPNSLLLADPRGFMVARYDLSLPPQAVLKDLKRLLKLSKVG
SIO_010081: PT3_RS17850
subclass of: SO_0000673
so part of: PT3_RS17850
location: 90145..90597
location: region:90145-90597:1
so has part: feature:90145-90597:1:exon

WP_019623192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90145-90597:1:exon

PT3_RS17855
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17855
so part of: sequence
location: 90599..91591
location: region:90599-91591:1
so has part: feature:90599-91591:1:exon
subclass of: SO_0000010

position:90599:1
position: 90599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91591:1
position: 91591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90599-91591:1:exon

PT3_RS17855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17855
inference: COORDINATES: protein motif:HMM:NF014665.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: COX15/CtaA family protein
translation: MSPRRSLLLCYLAIGLALVVILMGGWTRIMDAGLACPDWPGCFGQLIVPASAEQIAIAEQRFAGIEVDVFKGWIEMTHRYIAASLGVTIFLLAMISWRRRNDSGYPVYLSFALLLLVILQGLFGMWTVTLKLFPPVVTIHLIGGLLTLTLLVLLASKLRQYNRISTGKRSDWRLRLAIMVLFLQVALGGWTSANYAGWACDHWLSCIAEQKDELDFRSGFSLSFTADQNHQGGVLTQPARAAIQMVHRVGAFVVVAAVLLVSLRVFQIRSCRKPAVLLLIVLMLQLLVGGVSVIYGVPVVLAWAHHLGAVLLLLCLLWLKFRYELGVPDG
SIO_010081: PT3_RS17855
subclass of: SO_0000673
so part of: PT3_RS17855
location: 90599..91591
location: region:90599-91591:1
so has part: feature:90599-91591:1:exon

WP_019623193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90599-91591:1:exon

PT3_RS17860
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
gene: cyoE
locus tag: PT3_RS17860
so part of: sequence
location: 91584..92483
location: region:91584-92483:1
so has part: feature:91584-92483:1:exon
subclass of: SO_0000010

position:91584:1
position: 91584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92483:1
position: 92483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91584-92483:1:exon

PT3_RS17860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
gene: cyoE
locus tag: PT3_RS17860
EC number: 2.5.1.141
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007021346.1
GO function: GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO process: GO:0006783 - heme biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heme o synthase
translation: MDSQQQIIIQQNAWRDYLELCKPRVVAVMLLTAVVGMCLATPELPPIATVVSATLGIGLMAAGAAAVNHVMDRNIDAKMARTHRRPLPQGKIDATKALIFAGMLSLSGVVVLVVWTNVLTAWLTLGALIGYAVVYTMVLKRATPLNIVIGGIAGAAPPLLGWVAVTGRIESDSLLLVLIIFAWTPPHFWALCIHKKDDYARAGIPMLPVTHGEAYTRLHIMLYSVLMVLTTLFPFMTGMSGVIYLMGVTLLNLRFIQWAVRVYRGSDRAAPIAMFWFSVKYIMWLFAVLLVDHYVLGLN
SIO_010081: PT3_RS17860
subclass of: SO_0000673
so part of: PT3_RS17860
location: 91584..92483
location: region:91584-92483:1
so has part: feature:91584-92483:1:exon

WP_019623194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91584-92483:1:exon

PT3_RS17865
type: Gene
subclass of: SO_0000704
RO_0002162: 452627
locus tag: PT3_RS17865
so part of: sequence
location: 92631..93233
location: region:92631-93233:1
so has part: feature:92631-93233:1:exon
subclass of: SO_0000010

position:92631:1
position: 92631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93233:1
position: 93233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92631-93233:1:exon

PT3_RS17865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 452627
locus tag: PT3_RS17865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007021347.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Yip1 family protein
translation: MFLQHMWGVIYDPKHEWIDIRKEHYSMMHCFMSQISILAAIPALSLFIGTTQIGWSISGGEFIKLSTQSALMAAVAFYAAMWVAVGFIAFVIHWMEKTYGGNVTLDECMVLTTFTATPLFLAGIVGLYPVLWLNVIVGMIALAYTVYLLYTGVPEIMQISEDRAFFFASSILTVGLCVLVGLLAVTVILWSTIIPLSYIG
SIO_010081: PT3_RS17865
subclass of: SO_0000673
so part of: PT3_RS17865
location: 92631..93233
location: region:92631-93233:1
so has part: feature:92631-93233:1:exon

WP_019623195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92631-93233:1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 452627
note: 16S ribosomal RNA rRNA prediction is too short
so part of: sequence
location: 93927..94338
location: region:93927-94338:1
so has part: feature:93927-94338:1:region

position:93927:1
position: 93927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93927-94338:1:region